Citrus Sinensis ID: 014594

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420--
Protein Sequence
MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY
Secondary Structure (PSIPRED)
ccEEEccccccEEEEEcccccccccccccccccccccccccccccccccHHHHHHHccccccccHHHHHHccccccccccccHHHHHHHHccccccEEEcccccccccccHHHHHHHHccccccccccccHHHHHHHHHHHHccccccEEEcccHHHHHHHHHHHccccccEEEEccccccccHHHHHHcccEEEEEEccccccccHHHHHHHHcccccEEEEEccccccccccccHHHHHcHHccccEEEEccccccccccccHHHHHHccccEEEEcccHHHHHHHHHHHHHccccHHHHHHHHcccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEccccccHHHHHHHHHHcccEEcccccccccccEEEEcccHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccEEEEcccccccccccccccccccccccccccHccccccEEEEccccccHHHHHHHcccccHHHHHHHHHHHcccccccHHHHHHHHHHHHccccEEEEccccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHcccHcHEEEcccHHHHHHHHHHHHcccccEEEEccccEEEcHHHHHHcccEEEEEEccccccccHHHHHHHHcccccEEEEEEcccccccccccHHHHHHHHccccEEEEEcccHHHcHHHccHHHHHHcccEEEEEEcccccccHHHccEEEEEcHHHHHHHHcccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEccccccccHHHHHHHHHHcccEEEEccccccccEEEEEEccHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
mgvietssssslcllksnfsshpfvvpnrtvcpfqgnqrrviamsstlpveqqvnegqrrltgDSFIRSHLrklkpyqpilpfevlsiqlgrkpedivkidanenpygpppevrealgqlkfpyiypdpesRRLRAALAKdsglesdhilvGCGADELIDLIMRCvldpgdkivdcpptftmyefdaavngaavvkvprksdfsLNVELIADAVErekpkcifltspnnpdgsiindeDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWrakqpynvSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLkdvpflnpypsysnfilcevtsgmdakKLKDDLAKMGVMIRHYnnkelkgyvrvsvgkpehTDALMECLMHLY
Flexible Loop (DISEMBL)
mgvietssssslCLLKSNFSSHPFVVPNRTVCPFQGNQRRVIAMsstlpveqqvnegqrrltGDSFIRSHLrklkpyqpilpFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCifltspnnpdgsiINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKdvpflnpypsYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHynnkelkgyvrvSVGKPEHTDALMECLMHLY
Low Complexity Region (SEG)
MGVIETssssslcllksnfssHPFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNvsvaaevaacaaLQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMdakklkddlakMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY
Disordered region (IsUnstruct)
***********LCLLKSNFSSHPFVVPNRTVCPFQGNQRRVIAM*****************TGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKI***************ALGQLKFPYIYP**********L****GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY*********************LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL****
Disordered Region (DISOPRED)
*GV****SSSSLCLLKSNFSSHPFVVP**TVC********************************SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY
Disordered Region (DISEMBL)
**********SLCLLKSNFSSHPFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY
Disordered Region (DISPRO)
*GVIETSSSSSLCLLKS*****PFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	422	2.2.26 [Sep-21-2011]
Q9FEW2	413	Histidinol-phosphate amin	N/A	no	0.973	0.995	0.778	0.0
O82030	413	Histidinol-phosphate amin	N/A	no	0.973	0.995	0.773	0.0
P0DI07	417	Histidinol-phosphate amin	yes	no	0.983	0.995	0.754	0.0
B9DHD3	417	Histidinol-phosphate amin	yes	no	0.983	0.995	0.754	0.0
A5V022	370	Histidinol-phosphate amin	yes	no	0.836	0.954	0.482	5e-88
A7NFV2	371	Histidinol-phosphate amin	yes	no	0.836	0.951	0.488	1e-83
Q3Z879	358	Histidinol-phosphate amin	yes	no	0.824	0.972	0.406	2e-73
A5FR29	358	Histidinol-phosphate amin	yes	no	0.774	0.913	0.413	2e-71
Q3ZXL8	358	Histidinol-phosphate amin	yes	no	0.774	0.913	0.413	5e-71
Q58365	373	Histidinol-phosphate amin	yes	no	0.829	0.938	0.386	1e-59

>sp|Q9FEW2|HIS8_NICPL Histidinol-phosphate aminotransferase, chloroplastic OS=Nicotiana plumbaginifolia GN=HPA PE=1 SV=1

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/424 (77%), Positives = 375/424 (88%), Gaps = 13/424 (3%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVCPFQGNQRR-VIAMSSTLPVEQQVNEGQR 59
           MGVIE  ++SS+C+ ++N S           C  + NQRR +I M+S++PV+++  + QR
Sbjct: 1   MGVIELCNTSSICIGRANPS----------CCSIERNQRRRIICMASSVPVQEESQQKQR 50

Query: 60  RLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ 119
            +TGD+FIR HL KL PYQPILPFEVLS +LGRKPEDIVK+DANENPYGPPPEV EALG 
Sbjct: 51  -VTGDAFIRPHLLKLSPYQPILPFEVLSTRLGRKPEDIVKLDANENPYGPPPEVIEALGA 109

Query: 120 LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           +KFPYIYPDPESR LRAALA+DSGLES++IL GCGADELIDLIMRCVLDPGD IVDCPPT
Sbjct: 110 MKFPYIYPDPESRTLRAALAEDSGLESEYILAGCGADELIDLIMRCVLDPGDMIVDCPPT 169

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           FTMYEFDAAVNGA V+KVPR  DFSL+VE IA+ VE EKPKCIFLTSPNNPDGSII+DE 
Sbjct: 170 FTMYEFDAAVNGAHVIKVPRNPDFSLDVERIAEVVEHEKPKCIFLTSPNNPDGSIIDDET 229

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           LLKIL++PILV+LDEAY EFSG+ES+M+WVKKH+NLIVLRTFSKRAGLAGLRVGYGAFP 
Sbjct: 230 LLKILDLPILVILDEAYVEFSGMESKMKWVKKHENLIVLRTFSKRAGLAGLRVGYGAFPK 289

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPY 358
           SIIE+LWRAKQPYNVSVAAEVAACAAL+NP YLE VK AL++ERERLF LLK+VPFL+PY
Sbjct: 290 SIIEFLWRAKQPYNVSVAAEVAACAALKNPAYLENVKVALVQERERLFNLLKEVPFLDPY 349

Query: 359 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 418
           PSYSNFILC+VTSGMDAKKLK+DLA MGVMIRHYN+KELKGYVRVSVGKPEHT+ALM+CL
Sbjct: 350 PSYSNFILCKVTSGMDAKKLKEDLATMGVMIRHYNSKELKGYVRVSVGKPEHTEALMKCL 409

Query: 419 MHLY 422
            H Y
Sbjct: 410 KHFY 413

Nicotiana plumbaginifolia (taxid: 4092)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 9

>sp|O82030|HIS8_TOBAC Histidinol-phosphate aminotransferase, chloroplastic OS=Nicotiana tabacum GN=HPA PE=2 SV=1

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/424 (77%), Positives = 374/424 (88%), Gaps = 13/424 (3%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVCPFQGNQRR-VIAMSSTLPVEQQVNEGQR 59
           MGVIE  ++SS+C+ ++  S           C  + NQRR +I M+S++PV+++  + QR
Sbjct: 1   MGVIELCNTSSICIGRAKPS----------CCSIERNQRRRIICMASSVPVQEESQQKQR 50

Query: 60  RLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ 119
            +TGD+FIR HL KL PYQPILPFEVLS +LGRKPEDIVK+DANENPYGPPPEV EALG 
Sbjct: 51  -VTGDAFIRPHLLKLSPYQPILPFEVLSTRLGRKPEDIVKLDANENPYGPPPEVIEALGA 109

Query: 120 LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           +KFPYIYPDPESR LRAALA+DSGLES++IL GCGADELIDLIMRCVLDPGD IVDCPPT
Sbjct: 110 MKFPYIYPDPESRTLRAALAEDSGLESEYILAGCGADELIDLIMRCVLDPGDMIVDCPPT 169

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           FTMYEFDAAVNGA V+KVPR  DFSL+VE IA+ VE EKPKCIFLTSPNNPDGSI++DE 
Sbjct: 170 FTMYEFDAAVNGAHVIKVPRNPDFSLDVERIAEVVEHEKPKCIFLTSPNNPDGSIVDDET 229

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           LLKIL++PILV+LDEAY EFSG+ES+M+WVKKH+NLIVLRTFSKRAGLAGLRVGYGAFP 
Sbjct: 230 LLKILDLPILVILDEAYVEFSGMESKMKWVKKHENLIVLRTFSKRAGLAGLRVGYGAFPK 289

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPY 358
           SIIE+LWRAKQPYNVSVAAEVAACAAL+NP YLE VK AL++ERERLF LLK+VPFL+PY
Sbjct: 290 SIIEFLWRAKQPYNVSVAAEVAACAALKNPTYLENVKVALVQERERLFNLLKEVPFLDPY 349

Query: 359 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 418
           PSYSNFILC+VTSGMDAKKLK+DLA MGVMIRHYN+KELKGYVRVSVGKPEHT+ALM+CL
Sbjct: 350 PSYSNFILCKVTSGMDAKKLKEDLATMGVMIRHYNSKELKGYVRVSVGKPEHTEALMKCL 409

Query: 419 MHLY 422
            H Y
Sbjct: 410 KHFY 413

Nicotiana tabacum (taxid: 4097)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|P0DI07|HIS8B_ARATH Histidinol-phosphate aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=HPA2 PE=2 SV=1

 Score =  642 bits (1655), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/424 (75%), Positives = 358/424 (84%), Gaps = 9/424 (2%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVC-PFQGNQRRVIAMSSTLPVEQQVNEGQR 59
           MGVI    S S  +     SS   +  +R +  PF   + RV    S+      V+E + 
Sbjct: 1   MGVINVQGSPSFSI----HSSESNLRKSRALKKPFCSIRNRVYCAQSS---SAAVDESKN 53

Query: 60  RLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ 119
              GDSFIR HLR+L  YQPILPFEVLS QLGRKPEDIVK+DANENPYGPPPEV EALG 
Sbjct: 54  ITMGDSFIRPHLRQLAAYQPILPFEVLSAQLGRKPEDIVKLDANENPYGPPPEVFEALGN 113

Query: 120 LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           +KFPY+YPDP+SRRLR ALA+DSGLES++ILVGCGADELIDLIMRCVLDPG+KI+DCPPT
Sbjct: 114 MKFPYVYPDPQSRRLRDALAQDSGLESEYILVGCGADELIDLIMRCVLDPGEKIIDCPPT 173

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           F+MY FDAAVNGA V+KVPR  DFSLNV+ IA+ VE EKPKCIFLTSPNNPDGSII+++D
Sbjct: 174 FSMYVFDAAVNGAGVIKVPRNPDFSLNVDRIAEVVELEKPKCIFLTSPNNPDGSIISEDD 233

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           LLKILEMPILVVLDEAY EFSG+ESRM+WVKK++NLIVLRTFSKRAGLAGLRVGYGAFPL
Sbjct: 234 LLKILEMPILVVLDEAYIEFSGVESRMKWVKKYENLIVLRTFSKRAGLAGLRVGYGAFPL 293

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPY 358
           SIIEYLWRAKQPYNVSVA EVAA AAL N  YLE V++AL++ERERLF LLK+VPFLNPY
Sbjct: 294 SIIEYLWRAKQPYNVSVAGEVAALAALSNGKYLEDVRDALVRERERLFGLLKEVPFLNPY 353

Query: 359 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 418
           PSYSNFILCEVTSGMDAKKLK+DLAKMGVM+RHYN++ELKGYVRVS GKPEHTD LMECL
Sbjct: 354 PSYSNFILCEVTSGMDAKKLKEDLAKMGVMVRHYNSQELKGYVRVSAGKPEHTDVLMECL 413

Query: 419 MHLY 422
              Y
Sbjct: 414 KQFY 417

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|B9DHD3|HIS8A_ARATH Histidinol-phosphate aminotransferase 1, chloroplastic OS=Arabidopsis thaliana GN=HPA1 PE=2 SV=1

 Score =  642 bits (1655), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/424 (75%), Positives = 358/424 (84%), Gaps = 9/424 (2%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVC-PFQGNQRRVIAMSSTLPVEQQVNEGQR 59
           MGVI    S S  +     SS   +  +R +  PF   + RV    S+      V+E + 
Sbjct: 1   MGVINVQGSPSFSI----HSSESNLRKSRALKKPFCSIRNRVYCAQSS---SAAVDESKN 53

Query: 60  RLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ 119
              GDSFIR HLR+L  YQPILPFEVLS QLGRKPEDIVK+DANENPYGPPPEV EALG 
Sbjct: 54  ITMGDSFIRPHLRQLAAYQPILPFEVLSAQLGRKPEDIVKLDANENPYGPPPEVFEALGN 113

Query: 120 LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           +KFPY+YPDP+SRRLR ALA+DSGLES++ILVGCGADELIDLIMRCVLDPG+KI+DCPPT
Sbjct: 114 MKFPYVYPDPQSRRLRDALAQDSGLESEYILVGCGADELIDLIMRCVLDPGEKIIDCPPT 173

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           F+MY FDAAVNGA V+KVPR  DFSLNV+ IA+ VE EKPKCIFLTSPNNPDGSII+++D
Sbjct: 174 FSMYVFDAAVNGAGVIKVPRNPDFSLNVDRIAEVVELEKPKCIFLTSPNNPDGSIISEDD 233

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           LLKILEMPILVVLDEAY EFSG+ESRM+WVKK++NLIVLRTFSKRAGLAGLRVGYGAFPL
Sbjct: 234 LLKILEMPILVVLDEAYIEFSGVESRMKWVKKYENLIVLRTFSKRAGLAGLRVGYGAFPL 293

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPY 358
           SIIEYLWRAKQPYNVSVA EVAA AAL N  YLE V++AL++ERERLF LLK+VPFLNPY
Sbjct: 294 SIIEYLWRAKQPYNVSVAGEVAALAALSNGKYLEDVRDALVRERERLFGLLKEVPFLNPY 353

Query: 359 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 418
           PSYSNFILCEVTSGMDAKKLK+DLAKMGVM+RHYN++ELKGYVRVS GKPEHTD LMECL
Sbjct: 354 PSYSNFILCEVTSGMDAKKLKEDLAKMGVMVRHYNSQELKGYVRVSAGKPEHTDVLMECL 413

Query: 419 MHLY 422
              Y
Sbjct: 414 KQFY 417

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|A5V022|HIS8_ROSS1 Histidinol-phosphate aminotransferase OS=Roseiflexus sp. (strain RS-1) GN=hisC PE=3 SV=1

 Score =  325 bits (833), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 177/367 (48%), Positives = 244/367 (66%), Gaps = 14/367 (3%)

Query: 65  SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLK--F 122
             +R  +  L+PY PI+P E L+ +LG   E I+K+DANENPYGP P    AL  ++   
Sbjct: 7   GLLRPDIAALEPYTPIVPLETLAERLGLPVERIIKLDANENPYGPSPHALAALAAVERDA 66

Query: 123 PY---IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           P+   IYPDP+  RLRAAL++  G   + I+ G G+DELIDL+MR  L PGD ++DCPPT
Sbjct: 67  PHRYAIYPDPDHVRLRAALSRYIGQPPERIICGAGSDELIDLLMRATLRPGDTMIDCPPT 126

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           F MY FDAA+ GA VV VPR   F +++E +A+AVERE  K +FL +PNNP G+ +   D
Sbjct: 127 FAMYSFDAALYGARVVPVPRTDQFDVDIEGVAEAVEREGAKLLFLAAPNNPTGTPLARSD 186

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           + ++L++PI++ +DEAY EF+G  S ++ V    NL+VLRTFSK AGLAGLR+GY A   
Sbjct: 187 VERLLDLPIILAIDEAYAEFAG-TSVVDMVGACPNLVVLRTFSKWAGLAGLRIGYAAMHE 245

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEVKEA----LIKERERLFKLLKDVPFL 355
            +  Y+W+ KQPYNV+VAAEVAA A+L +   LE + A    ++ ERERL   L  +P  
Sbjct: 246 DVAAYVWKIKQPYNVNVAAEVAAIASLDD---LEERMATVARIVAERERLAAALAALPGF 302

Query: 356 NPYPSYSNFILCEVTSGMD-AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDAL 414
             YPS +NF+LC +T G   A+ + D LA+ G++IR++N   L   +R+SVG+PE  DAL
Sbjct: 303 RVYPSAANFLLCRITGGAARARTICDGLAQRGILIRYFNRPGLDDCIRISVGRPEQNDAL 362

Query: 415 MECLMHL 421
           +  L  L
Sbjct: 363 LHALREL 369

Roseiflexus sp. (strain RS-1) (taxid: 357808)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|A7NFV2|HIS8_ROSCS Histidinol-phosphate aminotransferase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=hisC PE=3 SV=1

 Score =  310 bits (794), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 177/362 (48%), Positives = 246/362 (67%), Gaps = 9/362 (2%)

Query: 65  SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKF-- 122
             +R  +  L+PY PI+P E L+ +LG   E I+K+DANENPYGP P    AL  ++   
Sbjct: 7   GLLRPDIAALEPYTPIVPLETLAERLGLPVERIIKLDANENPYGPSPRALAALAAVEHDA 66

Query: 123 PY---IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           P+   IYPDP+  RLRAAL++  G   + I+ G G+DELIDLIMR VL PGD +VDCPPT
Sbjct: 67  PHRYAIYPDPDHTRLRAALSRYVGQPPERIICGAGSDELIDLIMRAVLRPGDVMVDCPPT 126

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           F MY FDAA+ GA +V VPR   F ++VE +A+AVER+  K +FL +PNNP G+ +    
Sbjct: 127 FAMYSFDAALYGARIVAVPRTEQFDVDVEGVAEAVERDGAKLLFLAAPNNPTGTPLARTT 186

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           + ++L++PI++ +DEAY EF+G  S ++ V    NL+VLRTFSK AGLAGLR+GY A   
Sbjct: 187 VERLLDLPIILAIDEAYAEFAG-TSVIDLVGTRPNLVVLRTFSKWAGLAGLRIGYAAMHE 245

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQN-PIYLEVKEALIKERERLFKLLKDVPFLNPY 358
            +I YLW+ KQPYNV+VAAEVAA A+L +    L     ++ ERERL   L  +P ++ Y
Sbjct: 246 DVITYLWKIKQPYNVNVAAEVAAVASLDDLDERLSTVARIVAERERLAAALAALPGIHVY 305

Query: 359 PSYSNFILCEVTSG--MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALME 416
           PS +NF+LC +TSG    A+ ++D LA+ G++IR++N   +   +R+SVG+PE  DAL++
Sbjct: 306 PSAANFLLCRMTSGGAARARAIRDTLAQRGILIRYFNRPGIDDCIRISVGRPEQNDALLD 365

Query: 417 CL 418
            L
Sbjct: 366 VL 367

Roseiflexus castenholzii (strain DSM 13941 / HLO8) (taxid: 383372)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|Q3Z879|HIS8_DEHE1 Histidinol-phosphate aminotransferase OS=Dehalococcoides ethenogenes (strain 195) GN=hisC PE=3 SV=1

 Score =  276 bits (707), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 145/357 (40%), Positives = 225/357 (63%), Gaps = 9/357 (2%)

Query: 66  FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYI 125
           +IR+ L     Y      E++  +       I+K+DANEN YG  P V++A+      +I
Sbjct: 8   YIRTDLEGFAGYSACKAPELVKTK-----NRIIKLDANENLYGAAPTVQKAMSTFDQYHI 62

Query: 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
           YPD     +R  LA+ +G+  + I+ G G+D+LIDL++R  ++PGD++++CPPTF MY+F
Sbjct: 63  YPDATQFEIRRLLAEYTGVNMEQIICGAGSDQLIDLLLRLFINPGDEVINCPPTFAMYKF 122

Query: 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
              +N   VV VPR + + +N+  I +A+   K K IF+ +PNNP G+ I+ ED+ +IL+
Sbjct: 123 YTDLNRGTVVNVPRDAGYDVNIGGIKNALT-PKTKLIFIAAPNNPTGTAISKEDIRQILD 181

Query: 246 MPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL 305
           + +  V+DEAY EF+G ++ +  +  + NL++LRTFSK AGLAGLRVGYG FP  I +YL
Sbjct: 182 LGVPTVIDEAYYEFTG-QTMVTDMPSYPNLMILRTFSKWAGLAGLRVGYGLFPPVIADYL 240

Query: 306 WRAKQPYNVSVAAEVAA-CAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNF 364
            R K PY+V++AA+ A     LQ    LE  + ++ ER+RL+  L    +L PYPS +NF
Sbjct: 241 SRIKDPYSVNIAADAAVRQTMLQREYMLETVKKIVDERKRLYTELSKFSWLKPYPSAANF 300

Query: 365 ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421
           ILC++  G  AK ++  L   G+++R ++   ++  +R SVGKPE TDAL++ L  +
Sbjct: 301 ILCKLLKG-KAKDVQQALESQGILVRCFDAPMMENCLRFSVGKPEDTDALLKALGEM 356

Dehalococcoides ethenogenes (strain 195) (taxid: 243164)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|A5FR29|HIS8_DEHSB Histidinol-phosphate aminotransferase OS=Dehalococcoides sp. (strain BAV1) GN=hisC PE=3 SV=1

 Score =  270 bits (689), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 219/331 (66%), Gaps = 4/331 (1%)

Query: 89  QLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDH 148
           +L +  + I+K+DANEN YG  P VR+A+ +    +IYPD     +R  L++ +G+  + 
Sbjct: 26  ELVKTSKQIIKLDANENLYGAAPTVRQAMSEFNQYHIYPDATQSEIRRLLSEYTGVAVEQ 85

Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
           I+ G G+D+LIDL++R  ++PGD++++CPPTF MY+F   +N   +V VPR + +++N+ 
Sbjct: 86  IVCGAGSDQLIDLLLRLFINPGDEVINCPPTFAMYKFYTELNRGKIVNVPRDASYNINIA 145

Query: 209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEW 268
            I       + K IF+ +PNNP G+ I+ E++ +IL++ +  V+DEAY EF+G ++ +  
Sbjct: 146 AIN-NAITPQTKLIFIAAPNNPTGTAISKEEIRQILDLGVPTVVDEAYYEFTG-QTMVSD 203

Query: 269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAA-CAALQ 327
           + K+ NL++LRTFSK AGLAGLRVGYG FP  I +YL R K PY+V++AA+ A     LQ
Sbjct: 204 MSKYPNLMILRTFSKWAGLAGLRVGYGLFPPIIADYLSRIKDPYSVNIAADAAVRQTMLQ 263

Query: 328 NPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGV 387
               LE  + ++ ER+RL+  L    +L PYPS +NFILC++  G  AK+++ +L   G+
Sbjct: 264 REYMLETVKKIVNERQRLYTELSKFGWLKPYPSVANFILCKLLKG-KAKEVQHELESKGI 322

Query: 388 MIRHYNNKELKGYVRVSVGKPEHTDALMECL 418
           ++R ++   ++  +R SVGKPE TD L++ L
Sbjct: 323 LVRCFDAPMMENCLRFSVGKPEDTDGLLKAL 353

Dehalococcoides sp. (strain BAV1) (taxid: 216389)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|Q3ZXL8|HIS8_DEHSC Histidinol-phosphate aminotransferase OS=Dehalococcoides sp. (strain CBDB1) GN=hisC PE=3 SV=1

 Score =  268 bits (686), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 219/331 (66%), Gaps = 4/331 (1%)

Query: 89  QLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDH 148
           +L +  + I+K+DANEN YG  P VR+A+ +    +IYPD     +R  L++ +G+  + 
Sbjct: 26  ELVKTSKLIIKLDANENLYGAAPTVRQAMAEFNQYHIYPDATQSEIRRLLSEYTGVAVEQ 85

Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
           I+ G G+D+LIDL++R  ++PGD++++CPPTF MY+F   +N   +V VPR + +++N+ 
Sbjct: 86  IVCGAGSDQLIDLLLRLFINPGDEVINCPPTFAMYKFYTELNRGKIVNVPRDASYNINIA 145

Query: 209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEW 268
            I       + K IF+ +PNNP G+ I+ E++ +IL++ +  V+DEAY EF+G ++ +  
Sbjct: 146 AIN-NAITPQTKLIFIAAPNNPTGTAISKEEIRQILDLGVPTVVDEAYYEFTG-QTMVSD 203

Query: 269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAA-CAALQ 327
           + K+ NL++LRTFSK AGLAGLRVGYG FP  I +YL R K PY+V++AA+ A     LQ
Sbjct: 204 MSKYPNLMILRTFSKWAGLAGLRVGYGLFPPIIADYLSRIKDPYSVNIAADAAIRQTMLQ 263

Query: 328 NPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGV 387
               LE  + ++ ER+RL+  L    +L PYPS +NFILC++  G  AK+++ +L   G+
Sbjct: 264 REYMLETVKKIVNERQRLYTELSKFGWLKPYPSVANFILCKLLKG-KAKEVQHELESKGI 322

Query: 388 MIRHYNNKELKGYVRVSVGKPEHTDALMECL 418
           ++R ++   ++  +R SVGKPE TD L++ L
Sbjct: 323 LVRCFDAPMMENCLRFSVGKPEDTDGLLKAL 353

Dehalococcoides sp. (strain CBDB1) (taxid: 255470)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|Q58365|HIS8_METJA Histidinol-phosphate aminotransferase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=hisC PE=3 SV=1

 Score =  231 bits (588), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/367 (38%), Positives = 226/367 (61%), Gaps = 17/367 (4%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA-LGQLKFPYI 125
           +R  ++KLKPY P    E ++   G KPEDI+K+ +NENP+GP P+++E  L ++   + 
Sbjct: 10  VRDVVKKLKPYVPGKSKEEIARAYGIKPEDIIKLGSNENPWGPSPKIKEKILDEIDKIHQ 69

Query: 126 YPDPESRRLRAALAKDSGLESDHILVGC-GADELIDLIMRCVLDPGDKIVDCPPTFTMYE 184
           YP+P +  L   L+K   ++ ++I+VG  GADE+ID I R  +D GD+++   PTFT Y 
Sbjct: 70  YPEPVNPILMKELSKFLNVDEENIIVGGDGADEIIDTIFRTFVDDGDEVIIPIPTFTQYR 129

Query: 185 FDAAVNGAAV--VKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242
             A ++ A +   K  ++ DF LNVE + + +  +K K IFL +PNNP G+II + D+ +
Sbjct: 130 VSATIHNAKIKYAKYDKEKDFKLNVESVLNNI-TDKTKVIFLCTPNNPTGNIIENRDVER 188

Query: 243 IL-EMPILVVLDEAYTEFSGLESRMEWVKK---HDNLIVLRTFSKRAGLAGLRVGYGAFP 298
           ++ E   LVV+D AY E++  E   +W +K   +DN+IVLRTFSK  GLAG+RVGYG   
Sbjct: 189 VINETDALVVIDHAYIEYAKKE--YDWTQKAPEYDNVIVLRTFSKVFGLAGMRVGYGVAN 246

Query: 299 LSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE--VKEALIKERERLFKLLKDVPFLN 356
             II+Y+ R K  ++++  ++V A  AL++  + E  V++  IK RE L+  LK    + 
Sbjct: 247 KKIIDYMMRVKPIFSLTRLSQVCAITALRDREFFERCVRDG-IKSREMLYNGLKKFKDIK 305

Query: 357 PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKG--YVRVSVGKPEHTDAL 414
            YPS +N++L E+ + M AK+  ++L K GV++R   + +  G  YVRVS+G  E  +  
Sbjct: 306 VYPSEANYLLVELKT-MKAKEFCEELLKRGVIVRDCTSFDGLGDNYVRVSIGTFEEVERF 364

Query: 415 MECLMHL 421
           ++ L  +
Sbjct: 365 LKILEEI 371

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	422
255564464	423	histidinol-phosphate aminotransferase, p	0.997	0.995	0.818	0.0
356559575	424	PREDICTED: histidinol-phosphate aminotra	0.995	0.990	0.785	0.0
359493094	421	PREDICTED: histidinol-phosphate aminotra	0.992	0.995	0.810	0.0
51316088	413	RecName: Full=Histidinol-phosphate amino	0.973	0.995	0.778	0.0
51315816	413	RecName: Full=Histidinol-phosphate amino	0.973	0.995	0.773	0.0
212275482	417	uncharacterized protein LOC100191987 [Ze	0.936	0.947	0.782	0.0
195640672	417	histidinol-phosphate aminotransferase [Z	0.936	0.947	0.782	0.0
449465360	421	PREDICTED: histidinol-phosphate aminotra	0.976	0.978	0.764	0.0
18416245	417	Histidinol-phosphate aminotransferase [A	0.983	0.995	0.754	0.0
449496869	421	PREDICTED: histidinol-phosphate aminotra	0.976	0.978	0.762	0.0

>gi|255564464|ref|XP_002523228.1| histidinol-phosphate aminotransferase, putative [Ricinus communis] gi|223537524|gb|EEF39149.1| histidinol-phosphate aminotransferase, putative [Ricinus communis]

 Score =  714 bits (1843), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/424 (81%), Positives = 380/424 (89%), Gaps = 3/424 (0%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVCPFQ-GNQRRVIAMSSTLPVEQQVNEGQR 59
           MGVI+  +++SLCL+KS+ S H  ++P R +C F+  N+RRVIAM+S  PVE  +NE Q 
Sbjct: 1   MGVIDIYNTASLCLIKSSHSLHQSLLPQRRICSFEVNNRRRVIAMASFTPVEH-INEAQE 59

Query: 60  RLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ 119
           R+ GDSFIRSHLRKL PYQPILPFEVLS  LGRKPEDIVK+DANENPYGPPPE  EALG 
Sbjct: 60  RVAGDSFIRSHLRKLSPYQPILPFEVLSASLGRKPEDIVKLDANENPYGPPPEATEALGS 119

Query: 120 LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           LKFPYIYPDPESRRLR ALAKDS LES+HILVGCGADELIDLIMRC LDPGDKIVDCPPT
Sbjct: 120 LKFPYIYPDPESRRLREALAKDSDLESNHILVGCGADELIDLIMRCTLDPGDKIVDCPPT 179

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           FTMYEFDAAVNGA V+KV RK DFSLNVELI DAV REKPKCIFLTSPNNPDGSII+DED
Sbjct: 180 FTMYEFDAAVNGAEVIKVMRKPDFSLNVELIVDAVLREKPKCIFLTSPNNPDGSIISDED 239

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           LLKIL++PILVVLDEAY EFSGLESRM+WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 
Sbjct: 240 LLKILQLPILVVLDEAYIEFSGLESRMKWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPS 299

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPY 358
           SIIEYLWRAKQPYNVSVAAEV+ACAAL+NP YLE VK+AL++ERERL+KLLK+VPFL P+
Sbjct: 300 SIIEYLWRAKQPYNVSVAAEVSACAALENPTYLETVKDALVQERERLYKLLKEVPFLTPF 359

Query: 359 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 418
           PSYSNFILCEV SG DAKKLKDDLAKMGVM+RHYNNK LKGY+R+SVGKPE TD LM+CL
Sbjct: 360 PSYSNFILCEVKSGRDAKKLKDDLAKMGVMVRHYNNKVLKGYIRISVGKPEQTDVLMKCL 419

Query: 419 MHLY 422
             LY
Sbjct: 420 KTLY 423

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559575|ref|XP_003548074.1| PREDICTED: histidinol-phosphate aminotransferase, chloroplastic-like [Glycine max]

 Score =  681 bits (1758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/424 (78%), Positives = 377/424 (88%), Gaps = 4/424 (0%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFV-VPNRTVCPFQGN-QRRVIAMSSTLPVEQQVNEGQ 58
           MGVI+  ++ +LC +KSN +    V +  R +C F+GN QR+ +AM+ST+PVEQ VN G 
Sbjct: 1   MGVIDFYNTGALCWVKSNANLKQQVGLAPRPICSFEGNNQRKFVAMASTVPVEQ-VNNGP 59

Query: 59  RRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALG 118
            ++TGDSFIR HLRKL PYQPILPFEVLS +LGRKPEDIVK+DANENPYGPPPEV EALG
Sbjct: 60  LQVTGDSFIREHLRKLAPYQPILPFEVLSARLGRKPEDIVKLDANENPYGPPPEVMEALG 119

Query: 119 QLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
            ++FPY+YPDPESRRLRAALA DSGLE+++IL GCGADELIDLIMRCVLDPGDKIVDCPP
Sbjct: 120 SMQFPYVYPDPESRRLRAALAHDSGLEAEYILAGCGADELIDLIMRCVLDPGDKIVDCPP 179

Query: 179 TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238
           TFTMYEFDAAVNGA V+KVPR+ DFSLNVE IA+ V++EKPKCIFLTSPNNPDGSII+DE
Sbjct: 180 TFTMYEFDAAVNGALVIKVPRRPDFSLNVEQIAEVVKQEKPKCIFLTSPNNPDGSIIDDE 239

Query: 239 DLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
            LLKILE+PILV+LDEAY EFS +ESRM WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP
Sbjct: 240 VLLKILELPILVILDEAYIEFSAIESRMSWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 299

Query: 299 LSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNP 357
           LSIIEYLWRAKQPYNVSVAAE++ACAALQNP YLE VK AL+KER RL+ LLK+VPFL P
Sbjct: 300 LSIIEYLWRAKQPYNVSVAAEISACAALQNPTYLENVKNALLKERGRLYDLLKEVPFLRP 359

Query: 358 YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMEC 417
           +PS+SNFILCEVTSG DAKKLK+DLA+MGVMIRHY+ KELKGYVRV+VGKPE TD LM+C
Sbjct: 360 FPSHSNFILCEVTSGKDAKKLKEDLAQMGVMIRHYDKKELKGYVRVTVGKPEQTDTLMKC 419

Query: 418 LMHL 421
           L  L
Sbjct: 420 LKRL 423

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493094|ref|XP_003634508.1| PREDICTED: histidinol-phosphate aminotransferase, chloroplastic-like [Vitis vinifera]

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/422 (81%), Positives = 374/422 (88%), Gaps = 3/422 (0%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQVNEGQRR 60
           MGVI     SSLC++K N   H  + P   +C F+G ++ V  M+S +PV +Q +E Q R
Sbjct: 1   MGVINIYDISSLCVVKHNTDIH-LLEPRAPICSFEGRRKGVTCMTSAMPV-KQASEVQER 58

Query: 61  LTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL 120
           LTGDSFIR HL+ L PYQPILPFEVLS +LGRKPEDIVK+DANENPYGPPPEV EALG L
Sbjct: 59  LTGDSFIRPHLKNLSPYQPILPFEVLSSRLGRKPEDIVKLDANENPYGPPPEVFEALGSL 118

Query: 121 KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180
           KFPY+YPDPESRRLR ALA+DSG+ESD+IL GCGADELIDLIMRCVLDPGDKIVDCPPTF
Sbjct: 119 KFPYVYPDPESRRLRGALAEDSGIESDYILAGCGADELIDLIMRCVLDPGDKIVDCPPTF 178

Query: 181 TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240
           TMYEFDAAVNGA V+KVPR SDFSLN+E IAD VE+EKPKCIFLTSPNNPDGSIINDE L
Sbjct: 179 TMYEFDAAVNGALVLKVPRNSDFSLNLEAIADVVEKEKPKCIFLTSPNNPDGSIINDEIL 238

Query: 241 LKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300
           LKILE+PILVVLDEAY EFSG++SRM WVKK +NLIVLRTFSKRAGLAGLRVGYGAFPLS
Sbjct: 239 LKILELPILVVLDEAYIEFSGIKSRMGWVKKFENLIVLRTFSKRAGLAGLRVGYGAFPLS 298

Query: 301 IIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYP 359
           IIEYLWRAKQPYNVSVAAEV+ACAALQNP YLE VKEAL++ER RL+KLLK+VPFLNP+P
Sbjct: 299 IIEYLWRAKQPYNVSVAAEVSACAALQNPAYLEKVKEALVQERGRLYKLLKEVPFLNPFP 358

Query: 360 SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLM 419
           SYSNFILCEVTSGMDAKKLKDDLAK GVMIRHY+NKELKGYVRVSVGKPEHTDALM CL 
Sbjct: 359 SYSNFILCEVTSGMDAKKLKDDLAKKGVMIRHYSNKELKGYVRVSVGKPEHTDALMACLN 418

Query: 420 HL 421
            L
Sbjct: 419 SL 420

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51316088|sp|Q9FEW2.1|HIS8_NICPL RecName: Full=Histidinol-phosphate aminotransferase, chloroplastic; AltName: Full=Imidazole acetol-phosphate transaminase; Flags: Precursor gi|12055099|emb|CAC20728.1| histidinol phosphate aminotransferase [Nicotiana plumbaginifolia]

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/424 (77%), Positives = 375/424 (88%), Gaps = 13/424 (3%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVCPFQGNQRR-VIAMSSTLPVEQQVNEGQR 59
           MGVIE  ++SS+C+ ++N S           C  + NQRR +I M+S++PV+++  + QR
Sbjct: 1   MGVIELCNTSSICIGRANPS----------CCSIERNQRRRIICMASSVPVQEESQQKQR 50

Query: 60  RLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ 119
            +TGD+FIR HL KL PYQPILPFEVLS +LGRKPEDIVK+DANENPYGPPPEV EALG 
Sbjct: 51  -VTGDAFIRPHLLKLSPYQPILPFEVLSTRLGRKPEDIVKLDANENPYGPPPEVIEALGA 109

Query: 120 LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           +KFPYIYPDPESR LRAALA+DSGLES++IL GCGADELIDLIMRCVLDPGD IVDCPPT
Sbjct: 110 MKFPYIYPDPESRTLRAALAEDSGLESEYILAGCGADELIDLIMRCVLDPGDMIVDCPPT 169

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           FTMYEFDAAVNGA V+KVPR  DFSL+VE IA+ VE EKPKCIFLTSPNNPDGSII+DE 
Sbjct: 170 FTMYEFDAAVNGAHVIKVPRNPDFSLDVERIAEVVEHEKPKCIFLTSPNNPDGSIIDDET 229

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           LLKIL++PILV+LDEAY EFSG+ES+M+WVKKH+NLIVLRTFSKRAGLAGLRVGYGAFP 
Sbjct: 230 LLKILDLPILVILDEAYVEFSGMESKMKWVKKHENLIVLRTFSKRAGLAGLRVGYGAFPK 289

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPY 358
           SIIE+LWRAKQPYNVSVAAEVAACAAL+NP YLE VK AL++ERERLF LLK+VPFL+PY
Sbjct: 290 SIIEFLWRAKQPYNVSVAAEVAACAALKNPAYLENVKVALVQERERLFNLLKEVPFLDPY 349

Query: 359 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 418
           PSYSNFILC+VTSGMDAKKLK+DLA MGVMIRHYN+KELKGYVRVSVGKPEHT+ALM+CL
Sbjct: 350 PSYSNFILCKVTSGMDAKKLKEDLATMGVMIRHYNSKELKGYVRVSVGKPEHTEALMKCL 409

Query: 419 MHLY 422
            H Y
Sbjct: 410 KHFY 413

Source: Nicotiana plumbaginifolia

Species: Nicotiana plumbaginifolia

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51315816|sp|O82030.1|HIS8_TOBAC RecName: Full=Histidinol-phosphate aminotransferase, chloroplastic; AltName: Full=Imidazole acetol-phosphate transaminase; Flags: Precursor gi|3355626|emb|CAA70403.1| histidinol-phosphate aminotransferase [Nicotiana tabacum]

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/424 (77%), Positives = 374/424 (88%), Gaps = 13/424 (3%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVCPFQGNQRR-VIAMSSTLPVEQQVNEGQR 59
           MGVIE  ++SS+C+ ++  S           C  + NQRR +I M+S++PV+++  + QR
Sbjct: 1   MGVIELCNTSSICIGRAKPS----------CCSIERNQRRRIICMASSVPVQEESQQKQR 50

Query: 60  RLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ 119
            +TGD+FIR HL KL PYQPILPFEVLS +LGRKPEDIVK+DANENPYGPPPEV EALG 
Sbjct: 51  -VTGDAFIRPHLLKLSPYQPILPFEVLSTRLGRKPEDIVKLDANENPYGPPPEVIEALGA 109

Query: 120 LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           +KFPYIYPDPESR LRAALA+DSGLES++IL GCGADELIDLIMRCVLDPGD IVDCPPT
Sbjct: 110 MKFPYIYPDPESRTLRAALAEDSGLESEYILAGCGADELIDLIMRCVLDPGDMIVDCPPT 169

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           FTMYEFDAAVNGA V+KVPR  DFSL+VE IA+ VE EKPKCIFLTSPNNPDGSI++DE 
Sbjct: 170 FTMYEFDAAVNGAHVIKVPRNPDFSLDVERIAEVVEHEKPKCIFLTSPNNPDGSIVDDET 229

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           LLKIL++PILV+LDEAY EFSG+ES+M+WVKKH+NLIVLRTFSKRAGLAGLRVGYGAFP 
Sbjct: 230 LLKILDLPILVILDEAYVEFSGMESKMKWVKKHENLIVLRTFSKRAGLAGLRVGYGAFPK 289

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPY 358
           SIIE+LWRAKQPYNVSVAAEVAACAAL+NP YLE VK AL++ERERLF LLK+VPFL+PY
Sbjct: 290 SIIEFLWRAKQPYNVSVAAEVAACAALKNPTYLENVKVALVQERERLFNLLKEVPFLDPY 349

Query: 359 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 418
           PSYSNFILC+VTSGMDAKKLK+DLA MGVMIRHYN+KELKGYVRVSVGKPEHT+ALM+CL
Sbjct: 350 PSYSNFILCKVTSGMDAKKLKEDLATMGVMIRHYNSKELKGYVRVSVGKPEHTEALMKCL 409

Query: 419 MHLY 422
            H Y
Sbjct: 410 KHFY 413

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|212275482|ref|NP_001130883.1| uncharacterized protein LOC100191987 [Zea mays] gi|194690352|gb|ACF79260.1| unknown [Zea mays] gi|224028727|gb|ACN33439.1| unknown [Zea mays] gi|413938505|gb|AFW73056.1| histidinol-phosphate aminotransferase [Zea mays]

 Score =  644 bits (1662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/404 (78%), Positives = 352/404 (87%), Gaps = 9/404 (2%)

Query: 27  PNRTVCPFQGNQR----RVI--AMSSTLPVEQ--QVNEGQRRLTGDSFIRSHLRKLKPYQ 78
           P+     F G++R    RV    M+S  PVE+     E + RLTGDSFIR HLR L PYQ
Sbjct: 12  PSPAASHFAGHRRSQADRVFLRTMASAAPVEEPTAAAEAKGRLTGDSFIRRHLRTLAPYQ 71

Query: 79  PILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAAL 138
           PILPFEVLS +LGR+PEDI+K+DANENPYGPPPEV  ALG LKFPY+YPDPESR+LRAAL
Sbjct: 72  PILPFEVLSARLGRRPEDIIKLDANENPYGPPPEVAAALGSLKFPYVYPDPESRQLRAAL 131

Query: 139 AKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP 198
           A+DSGLESD+IL GCGADELIDLIMRCVL+PGDKIVDCPPTFTMYEFDA+VNGA V+KVP
Sbjct: 132 AEDSGLESDYILAGCGADELIDLIMRCVLEPGDKIVDCPPTFTMYEFDASVNGALVIKVP 191

Query: 199 RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTE 258
           R  DFSL+V+LI + VE+E PKCIFLTSPNNPDGS+INDEDLLKIL++PILVVLDEAY E
Sbjct: 192 RLPDFSLDVDLIVEVVEQEMPKCIFLTSPNNPDGSVINDEDLLKILDLPILVVLDEAYIE 251

Query: 259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA 318
           FS L+SRM WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA
Sbjct: 252 FSSLQSRMAWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA 311

Query: 319 EVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKK 377
           EV+ACAALQNP YLE VK  L+KERERLF LLK +PFL P+PS+SNFILCEVTSG DAKK
Sbjct: 312 EVSACAALQNPTYLENVKNLLVKERERLFNLLKGIPFLKPFPSHSNFILCEVTSGKDAKK 371

Query: 378 LKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421
           +K+DLAKMGVMIRHY+ KELKGY+R+SVGKPEHTDALM+ L  L
Sbjct: 372 IKEDLAKMGVMIRHYDKKELKGYIRISVGKPEHTDALMKGLNAL 415

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|195640672|gb|ACG39804.1| histidinol-phosphate aminotransferase [Zea mays]

 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/404 (78%), Positives = 353/404 (87%), Gaps = 9/404 (2%)

Query: 27  PNRTVCPFQGNQR----RVI--AMSSTLPVEQQVN--EGQRRLTGDSFIRSHLRKLKPYQ 78
           P+  V  F G++R    RV    M+S  PVE+     E + RLTGDSFIR HLR L PYQ
Sbjct: 12  PSPAVSHFAGHRRSQADRVFLRTMASAAPVEEPTAXAEAKGRLTGDSFIRRHLRTLAPYQ 71

Query: 79  PILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAAL 138
           PILPFEVLS +LGR+PEDI+K+DANENPYGPPPEV  ALG LKFPY+YPDPESR+LRAAL
Sbjct: 72  PILPFEVLSARLGRRPEDIIKLDANENPYGPPPEVAAALGSLKFPYVYPDPESRQLRAAL 131

Query: 139 AKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP 198
           A+DS LESD+IL GCGADELIDLIMRCVL+PGDKIVDCPPTFTMYEFDA+VNGA V+KVP
Sbjct: 132 AEDSRLESDYILAGCGADELIDLIMRCVLEPGDKIVDCPPTFTMYEFDASVNGALVIKVP 191

Query: 199 RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTE 258
           R  DFSL+V+LI + VE+E+PKCIFLTSPNNPDGS+INDEDLLKIL++PILVVLDEAY E
Sbjct: 192 RLPDFSLDVDLIVEVVEQERPKCIFLTSPNNPDGSVINDEDLLKILDLPILVVLDEAYIE 251

Query: 259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA 318
           FS L+SRM WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA
Sbjct: 252 FSSLQSRMAWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA 311

Query: 319 EVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKK 377
           EV+ACAALQNP YLE VK  L+KERERLF LLK +PFL P+PS+SNFILCEVTSG DAKK
Sbjct: 312 EVSACAALQNPTYLENVKNLLVKERERLFNLLKGIPFLKPFPSHSNFILCEVTSGKDAKK 371

Query: 378 LKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421
           +K+DLAKMGVMIRHY+ KELKGY+R+SVGKPEHTDALM+ L  L
Sbjct: 372 IKEDLAKMGVMIRHYDKKELKGYIRISVGKPEHTDALMKGLNAL 415

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465360|ref|XP_004150396.1| PREDICTED: histidinol-phosphate aminotransferase 1, chloroplastic-like [Cucumis sativus]

 Score =  643 bits (1659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/429 (76%), Positives = 367/429 (85%), Gaps = 17/429 (3%)

Query: 1   MGVIETSSSSSLCLLK-------SNFSSHPFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQ 53
           M VI  S+ +  CLLK       S  SSH      R  C   G ++ V+ M+S +P    
Sbjct: 1   MAVIHISNPTQ-CLLKFKTNLPASEPSSH------RPNCSVAGRRKWVVNMTSQIPA--H 51

Query: 54  VNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEV 113
           V E Q+ LTGDSFIR HLRKL PYQPILPFEVLS +LGRKPEDI+K+DANENPYGPPP+V
Sbjct: 52  VQETQQSLTGDSFIRPHLRKLSPYQPILPFEVLSTRLGRKPEDIIKLDANENPYGPPPDV 111

Query: 114 REALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173
            EALG +KFP++YPDPESR+LRAALA DSGLESD+ILVGCGADELIDLIMRCVLDPGDKI
Sbjct: 112 LEALGTMKFPHVYPDPESRQLRAALAIDSGLESDYILVGCGADELIDLIMRCVLDPGDKI 171

Query: 174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233
           VDCPPTFTMYEFDAAVNGA V+KVPRK DFSLNV+LI D V +EKPKCIFLTSPNNPDGS
Sbjct: 172 VDCPPTFTMYEFDAAVNGALVIKVPRKPDFSLNVDLIEDVVRKEKPKCIFLTSPNNPDGS 231

Query: 234 IINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
           +I+DEDLLKIL++P+LVVLDEAY EFS  ES+M+WVKK++NLIVLRTFSKRAGLAGLRVG
Sbjct: 232 VISDEDLLKILDLPVLVVLDEAYIEFSSTESKMQWVKKYENLIVLRTFSKRAGLAGLRVG 291

Query: 294 YGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDV 352
           YGAFPLSIIEY WRAKQPYNVSVAAE+AACAALQNP YLE VK AL++ERERL+ LL DV
Sbjct: 292 YGAFPLSIIEYAWRAKQPYNVSVAAEIAACAALQNPSYLEKVKNALVQERERLYNLLTDV 351

Query: 353 PFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTD 412
           PFLNP+PS+SNFILCEVTSG DAKKLK+DLAKMGVMIRHY+ KELKGYVRV+ GKPEHTD
Sbjct: 352 PFLNPFPSHSNFILCEVTSGKDAKKLKEDLAKMGVMIRHYDKKELKGYVRVTAGKPEHTD 411

Query: 413 ALMECLMHL 421
           ALM+CL  L
Sbjct: 412 ALMDCLRRL 420

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18416245|ref|NP_568226.1| Histidinol-phosphate aminotransferase [Arabidopsis thaliana] gi|79327596|ref|NP_001031867.1| Histidinol-phosphate aminotransferase [Arabidopsis thaliana] gi|186494687|ref|NP_001117584.1| Histidinol-phosphate aminotransferase [Arabidopsis thaliana] gi|380876920|sp|B9DHD3.1|HIS8A_ARATH RecName: Full=Histidinol-phosphate aminotransferase 1, chloroplastic; AltName: Full=Gene duplicate 1-B protein; AltName: Full=Imidazole acetol-phosphate transaminase; AltName: Full=Protein EMBRYO DEFECTIVE 2196; AltName: Full=Protein HISTIDINE BIOSYNTHESIS 6A; Flags: Precursor gi|380876921|sp|P0DI07.1|HIS8B_ARATH RecName: Full=Histidinol-phosphate aminotransferase 2, chloroplastic; AltName: Full=Gene duplicate 1-A protein; AltName: Full=Imidazole acetol-phosphate transaminase; AltName: Full=Protein HISTIDINE BIOSYNTHESIS 6B; Flags: Precursor gi|15292797|gb|AAK92767.1| putative histidinol-phosphate aminotransferase [Arabidopsis thaliana] gi|21436321|gb|AAM51330.1| putative histidinol-phosphate aminotransferase [Arabidopsis thaliana] gi|222424389|dbj|BAH20150.1| AT5G10330 [Arabidopsis thaliana] gi|332004140|gb|AED91523.1| Histidinol-phosphate aminotransferase [Arabidopsis thaliana] gi|332004141|gb|AED91524.1| Histidinol-phosphate aminotransferase [Arabidopsis thaliana] gi|332197131|gb|AEE35252.1| Histidinol-phosphate aminotransferase [Arabidopsis thaliana]

 Score =  642 bits (1655), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/424 (75%), Positives = 358/424 (84%), Gaps = 9/424 (2%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVC-PFQGNQRRVIAMSSTLPVEQQVNEGQR 59
           MGVI    S S  +     SS   +  +R +  PF   + RV    S+      V+E + 
Sbjct: 1   MGVINVQGSPSFSI----HSSESNLRKSRALKKPFCSIRNRVYCAQSS---SAAVDESKN 53

Query: 60  RLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ 119
              GDSFIR HLR+L  YQPILPFEVLS QLGRKPEDIVK+DANENPYGPPPEV EALG 
Sbjct: 54  ITMGDSFIRPHLRQLAAYQPILPFEVLSAQLGRKPEDIVKLDANENPYGPPPEVFEALGN 113

Query: 120 LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           +KFPY+YPDP+SRRLR ALA+DSGLES++ILVGCGADELIDLIMRCVLDPG+KI+DCPPT
Sbjct: 114 MKFPYVYPDPQSRRLRDALAQDSGLESEYILVGCGADELIDLIMRCVLDPGEKIIDCPPT 173

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           F+MY FDAAVNGA V+KVPR  DFSLNV+ IA+ VE EKPKCIFLTSPNNPDGSII+++D
Sbjct: 174 FSMYVFDAAVNGAGVIKVPRNPDFSLNVDRIAEVVELEKPKCIFLTSPNNPDGSIISEDD 233

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           LLKILEMPILVVLDEAY EFSG+ESRM+WVKK++NLIVLRTFSKRAGLAGLRVGYGAFPL
Sbjct: 234 LLKILEMPILVVLDEAYIEFSGVESRMKWVKKYENLIVLRTFSKRAGLAGLRVGYGAFPL 293

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPY 358
           SIIEYLWRAKQPYNVSVA EVAA AAL N  YLE V++AL++ERERLF LLK+VPFLNPY
Sbjct: 294 SIIEYLWRAKQPYNVSVAGEVAALAALSNGKYLEDVRDALVRERERLFGLLKEVPFLNPY 353

Query: 359 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 418
           PSYSNFILCEVTSGMDAKKLK+DLAKMGVM+RHYN++ELKGYVRVS GKPEHTD LMECL
Sbjct: 354 PSYSNFILCEVTSGMDAKKLKEDLAKMGVMVRHYNSQELKGYVRVSAGKPEHTDVLMECL 413

Query: 419 MHLY 422
              Y
Sbjct: 414 KQFY 417

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449496869|ref|XP_004160249.1| PREDICTED: histidinol-phosphate aminotransferase 1, chloroplastic-like [Cucumis sativus]

 Score =  641 bits (1654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/429 (76%), Positives = 366/429 (85%), Gaps = 17/429 (3%)

Query: 1   MGVIETSSSSSLCLLK-------SNFSSHPFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQ 53
           M VI  S+ +  CLLK       S  SSH      R  C   G ++ V+ M+S +P    
Sbjct: 1   MAVIHISNPTQ-CLLKFKTNLPASEPSSH------RPNCSVAGRRKWVVNMTSQIPA--H 51

Query: 54  VNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEV 113
           V E Q+ LTGDSFIR HLRKL PYQPILPFEVLS +LGRKPEDI+K+DANENPYGPPP+V
Sbjct: 52  VQETQQSLTGDSFIRPHLRKLSPYQPILPFEVLSTRLGRKPEDIIKLDANENPYGPPPDV 111

Query: 114 REALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173
            EALG +KFP++YPDPESR+LRAALA DSGLESD+ILVGCGADELIDLIMRCVLDPGDKI
Sbjct: 112 LEALGTMKFPHVYPDPESRQLRAALAIDSGLESDYILVGCGADELIDLIMRCVLDPGDKI 171

Query: 174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233
           VDCPPTFTMYEFDAAVNGA V+KVPRK DFSLNV+LI D V +EKPKCIFLTSPNNPDGS
Sbjct: 172 VDCPPTFTMYEFDAAVNGALVIKVPRKPDFSLNVDLIEDVVRKEKPKCIFLTSPNNPDGS 231

Query: 234 IINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
           +I+DEDLLKIL++P+LVVLDEAY EFS  ES+M+WVKK++NLIVLRTFSKRAGLAGLRVG
Sbjct: 232 VISDEDLLKILDLPVLVVLDEAYIEFSSTESKMQWVKKYENLIVLRTFSKRAGLAGLRVG 291

Query: 294 YGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDV 352
           YGAFPLSIIEY WRAKQPYNVSVAAE+AACAALQNP YLE  K AL++ERERL+ LL DV
Sbjct: 292 YGAFPLSIIEYAWRAKQPYNVSVAAEIAACAALQNPSYLENSKNALVQERERLYNLLTDV 351

Query: 353 PFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTD 412
           PFLNP+PS+SNFILCEVTSG DAKKLK+DLAKMGVMIRHY+ KELKGYVRV+ GKPEHTD
Sbjct: 352 PFLNPFPSHSNFILCEVTSGKDAKKLKEDLAKMGVMIRHYDKKELKGYVRVTAGKPEHTD 411

Query: 413 ALMECLMHL 421
           ALM+CL  L
Sbjct: 412 ALMDCLRRL 420

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	422
TAIR|locus:2016099	417	HISN6B "HISTIDINE BIOSYNTHESIS	0.917	0.928	0.744	3.5e-155
TAIR|locus:2145382	417	HPA1 "histidinol phosphate ami	0.917	0.928	0.744	3.5e-155
TIGR_CMR|DET_0843	358	DET_0843 "histidinol-phosphate	0.774	0.913	0.404	6.7e-65
TIGR_CMR|CHY_1086	349	CHY_1086 "histidinol-phosphate	0.791	0.957	0.348	2e-47
TIGR_CMR|BA_1539	370	BA_1539 "histidinol-phosphate	0.822	0.937	0.315	2.8e-41
TIGR_CMR|CHY_1929	362	CHY_1929 "histidinol-phosphate	0.789	0.919	0.331	2.9e-39
ASPGD|ASPL0000053485	447	AN0717 [Emericella nidulans (t	0.578	0.545	0.357	5.1e-39
TIGR_CMR|SPO_3177	361	SPO_3177 "histidinol-phosphate	0.758	0.886	0.291	7.2e-36
TIGR_CMR|BA_2955	366	BA_2955 "histidinol-phosphate	0.796	0.918	0.300	3.1e-35
TIGR_CMR|DET_0655	368	DET_0655 "histidinol-phosphate	0.786	0.902	0.301	1.1e-34

TAIR|locus:2016099 HISN6B "HISTIDINE BIOSYNTHESIS 6B" [Arabidopsis thaliana (taxid:3702)]

 Score = 1513 (537.7 bits), Expect = 3.5e-155, P = 3.5e-155
 Identities = 291/391 (74%), Positives = 324/391 (82%)

Query:    33 PFQGNQRRVIAMSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGR 92
             PF   + RV    S+      V+E +    GDSFIR HLR+L  YQPILPFEVLS QLGR
Sbjct:    30 PFCSIRNRVYCAQSS---SAAVDESKNITMGDSFIRPHLRQLAAYQPILPFEVLSAQLGR 86

Query:    93 KPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVG 152
             KPEDIVK+DANENPYGPPPEV EALG +KFPY+YPDP+SRRLR ALA+DSGLES++ILVG
Sbjct:    87 KPEDIVKLDANENPYGPPPEVFEALGNMKFPYVYPDPQSRRLRDALAQDSGLESEYILVG 146

Query:   153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIAD 212
             CGADELIDLIMRCVLDPG+KI+DCPPTF+MY FDAAVNGA V+KVPR  DFSLNV+ IA+
Sbjct:   147 CGADELIDLIMRCVLDPGEKIIDCPPTFSMYVFDAAVNGAGVIKVPRNPDFSLNVDRIAE 206

Query:   213 AVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKH 272
              VE EKPKCIFLTSPNNPDGSII+++DLLKILEMPILVVLDEAY EFSG+ESRM+WVKK+
Sbjct:   207 VVELEKPKCIFLTSPNNPDGSIISEDDLLKILEMPILVVLDEAYIEFSGVESRMKWVKKY 266

Query:   273 DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYL 332
             +NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN            L N  YL
Sbjct:   267 ENLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAGEVAALAALSNGKYL 326

Query:   333 E-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMXXXXXXXXXXXMGVMIRH 391
             E V++AL++ERERLF LLK+VPFLNPYPSYSNFILCEVTSGM           MGVM+RH
Sbjct:   327 EDVRDALVRERERLFGLLKEVPFLNPYPSYSNFILCEVTSGMDAKKLKEDLAKMGVMVRH 386

Query:   392 YNNKELKGYVRVSVGKPEHTDALMECLMHLY 422
             YN++ELKGYVRVS GKPEHTD LMECL   Y
Sbjct:   387 YNSQELKGYVRVSAGKPEHTDVLMECLKQFY 417

GO:0000105 "histidine biosynthetic process" evidence=IEA;IGI

GO:0003824 "catalytic activity" evidence=IEA

GO:0004400 "histidinol-phosphate transaminase activity" evidence=IEA;IGI;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016740 "transferase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0009570 "chloroplast stroma" evidence=IDA

TAIR|locus:2145382 HPA1 "histidinol phosphate aminotransferase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1513 (537.7 bits), Expect = 3.5e-155, P = 3.5e-155
 Identities = 291/391 (74%), Positives = 324/391 (82%)

Query:    33 PFQGNQRRVIAMSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGR 92
             PF   + RV    S+      V+E +    GDSFIR HLR+L  YQPILPFEVLS QLGR
Sbjct:    30 PFCSIRNRVYCAQSS---SAAVDESKNITMGDSFIRPHLRQLAAYQPILPFEVLSAQLGR 86

Query:    93 KPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVG 152
             KPEDIVK+DANENPYGPPPEV EALG +KFPY+YPDP+SRRLR ALA+DSGLES++ILVG
Sbjct:    87 KPEDIVKLDANENPYGPPPEVFEALGNMKFPYVYPDPQSRRLRDALAQDSGLESEYILVG 146

Query:   153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIAD 212
             CGADELIDLIMRCVLDPG+KI+DCPPTF+MY FDAAVNGA V+KVPR  DFSLNV+ IA+
Sbjct:   147 CGADELIDLIMRCVLDPGEKIIDCPPTFSMYVFDAAVNGAGVIKVPRNPDFSLNVDRIAE 206

Query:   213 AVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKH 272
              VE EKPKCIFLTSPNNPDGSII+++DLLKILEMPILVVLDEAY EFSG+ESRM+WVKK+
Sbjct:   207 VVELEKPKCIFLTSPNNPDGSIISEDDLLKILEMPILVVLDEAYIEFSGVESRMKWVKKY 266

Query:   273 DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYL 332
             +NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN            L N  YL
Sbjct:   267 ENLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAGEVAALAALSNGKYL 326

Query:   333 E-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMXXXXXXXXXXXMGVMIRH 391
             E V++AL++ERERLF LLK+VPFLNPYPSYSNFILCEVTSGM           MGVM+RH
Sbjct:   327 EDVRDALVRERERLFGLLKEVPFLNPYPSYSNFILCEVTSGMDAKKLKEDLAKMGVMVRH 386

Query:   392 YNNKELKGYVRVSVGKPEHTDALMECLMHLY 422
             YN++ELKGYVRVS GKPEHTD LMECL   Y
Sbjct:   387 YNSQELKGYVRVSAGKPEHTDVLMECLKQFY 417

GO:0000105 "histidine biosynthetic process" evidence=IEA;TAS

GO:0003824 "catalytic activity" evidence=IEA

GO:0004400 "histidinol-phosphate transaminase activity" evidence=IEA;IGI;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0016740 "transferase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

TIGR_CMR|DET_0843 DET_0843 "histidinol-phosphate aminotransferase" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
 Identities = 134/331 (40%), Positives = 205/331 (61%)

Query:    89 QLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDH 148
             +L +    I+K+DANEN YG  P V++A+      +IYPD     +R  LA+ +G+  + 
Sbjct:    26 ELVKTKNRIIKLDANENLYGAAPTVQKAMSTFDQYHIYPDATQFEIRRLLAEYTGVNMEQ 85

Query:   149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
             I+ G G+D+LIDL++R  ++PGD++++CPPTF MY+F   +N   VV VPR + + +N+ 
Sbjct:    86 IICGAGSDQLIDLLLRLFINPGDEVINCPPTFAMYKFYTDLNRGTVVNVPRDAGYDVNIG 145

Query:   209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEW 268
              I +A+   K K IF+ +PNNP G+ I+ ED+ +IL++ +  V+DEAY EF+G ++ +  
Sbjct:   146 GIKNALT-PKTKLIFIAAPNNPTGTAISKEDIRQILDLGVPTVIDEAYYEFTG-QTMVTD 203

Query:   269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXX-LQ 327
             +  + NL++LRTFSK AGLAGLRVGYG FP  I +YL R K PY+             LQ
Sbjct:   204 MPSYPNLMILRTFSKWAGLAGLRVGYGLFPPVIADYLSRIKDPYSVNIAADAAVRQTMLQ 263

Query:   328 NPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMXXXXXXXXXXXMGV 387
                 LE  + ++ ER+RL+  L    +L PYPS +NFILC++  G             G+
Sbjct:   264 REYMLETVKKIVDERKRLYTELSKFSWLKPYPSAANFILCKLLKGKAKDVQQALES-QGI 322

Query:   388 MIRHYNNKELKGYVRVSVGKPEHTDALMECL 418
             ++R ++   ++  +R SVGKPE TDAL++ L
Sbjct:   323 LVRCFDAPMMENCLRFSVGKPEDTDALLKAL 353

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004400 "histidinol-phosphate transaminase activity" evidence=ISS

TIGR_CMR|CHY_1086 CHY_1086 "histidinol-phosphate aminotransferase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
 Identities = 125/359 (34%), Positives = 197/359 (54%)

Query:    66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPP----EVREALGQLK 121
             + +    +LKPY+P L    +S +        +K+DANENPY  P     E+   +G   
Sbjct:     6 YFKEAFAQLKPYEPHL----VSYE--------IKLDANENPYLFPKSLLEEIFSKIGTRD 53

Query:   122 FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181
             FP +YPDP + RLR  L++  G+  ++I++G G+DELI  +       G   +   P+F 
Sbjct:    54 FP-LYPDPLAGRLRIRLSEKLGVLPENIVLGNGSDELILCLYLAFGGYGRIALSFSPSFV 112

Query:   182 MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241
             MY   A V      +V  + DFSL+++    A+E+ +P  +FL +PNNP G++++ E + 
Sbjct:   113 MYRHHAFVTQTEFFEVSYRDDFSLDLDETKKAIEKYQPHLVFLANPNNPTGTLVDIETIK 172

Query:   242 KILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301
             K+L    L+V+DEAY EFSG+ S ++ +KK+ NL++LRTFSK   LAGLR+GY    + +
Sbjct:   173 KLLAYDHLLVVDEAYVEFSGV-SAIDLLKKYQNLVILRTFSKARALAGLRLGYLVASVDV 231

Query:   302 IEYLWRAKQPYNXXXXXXXXXXXXLQNP-IYL-EVKEALIKERERLFKLLKDVPFLNPYP 359
             ++ + + K PYN            L N  ++  E+KE ++ ERERL+  L  +  L P  
Sbjct:   232 VKEIIKVKNPYNVNVFSQIAGEVVLANEEVFQGEIKE-IVAERERLYNQLASLG-LKPVK 289

Query:   360 SYSNFILCEVTSGMXXXXXXXXXXXMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 418
             S++NFIL E   G             G+++R Y    L  Y+R++VG PE    L++ L
Sbjct:   290 SHANFILVEF--GEKAKKIHQELINHGILVR-YLGGALANYLRITVGTPEENRQLLKKL 345

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004400 "histidinol-phosphate transaminase activity" evidence=ISS

TIGR_CMR|BA_1539 BA_1539 "histidinol-phosphate aminotransferase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 115/364 (31%), Positives = 185/364 (50%)

Query:    67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPY-I 125
             ++  L  L+ Y P    E +  + G     IVK+ +NENP+G    V EAL  L   Y +
Sbjct:     3 VKEQLLTLRAYVPGKNIEEVKREYGLSK--IVKLASNENPFGCSARVTEALTSLASQYAL 60

Query:   126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
             YPD  +  LR  +AK  G++++ +L G G DE+I +I R +L  G  +V   PTF+ Y  
Sbjct:    61 YPDGHAFELRTQVAKHLGVKAEQLLFGSGLDEVIQMISRALLHEGTNVVMANPTFSQYHH 120

Query:   186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
              A + GA V +V  K     +++ +   V+ ++ K +++ +PNNP G+ +  + LL  LE
Sbjct:   121 HAVIEGAEVREVSLKDGIH-DLDAMLQQVD-DQTKIVWICNPNNPTGTYVEKQKLLSFLE 178

Query:   246 -MP--ILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
              +P   LV++DEAY E++G E     +  ++K++NL+VLRTFSK  GLA  R+GY     
Sbjct:   179 SVPKSALVIMDEAYYEYAGAEDYPQTLPLLEKYENLMVLRTFSKAYGLAAFRIGYAVGNT 238

Query:   300 SIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYLEVKEALIKERERLFKLLKDVPFLNP-- 357
              +I  L  A+ P+N            L++  +L+  E + K  E L +        N   
Sbjct:   239 ELIGQLEVARLPFNTSTVAQSVALAALEDQAFLQ--ECVKKNEEGLHQYYAFCKEYNVFY 296

Query:   358 YPSYSNFILCEVTSGMXXXXXXXXXXXMGVMIRHYNNKELKGYVRVSVGKPEHTDALMEC 417
             YPS +NFI  ++  G+            G ++R      +   +R++VG  E  D ++E 
Sbjct:   297 YPSQTNFIFLKL--GIPGNEAFERLMKKGYIVRSGAAFGIDDGIRITVGLKEENDEIIEL 354

Query:   418 LMHL 421
             L  L
Sbjct:   355 LKEL 358

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004400 "histidinol-phosphate transaminase activity" evidence=ISS

TIGR_CMR|CHY_1929 CHY_1929 "histidinol-phosphate aminotransferase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
 Identities = 117/353 (33%), Positives = 194/353 (54%)

Query:    67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL--KFPY 124
             +R  L  LKPY P  P E +  +LG    +I K+ +NEN +G  P+V  A+ +   K  Y
Sbjct:     2 VRKALENLKPYVPGKPVEEVERELGIT--NIDKLASNENLWGISPKVAAAIKEAVDKVNY 59

Query:   125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE 184
              YPD  + RL+  +A   G+  D+I++G G+DEL+  +   ++DPGD+ +   P+F  YE
Sbjct:    60 -YPDGGAFRLKEKIAAKYGVTPDNIILGNGSDELVMFLAMALIDPGDEAIMPVPSFPRYE 118

Query:   185 -FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243
                  +NG A  ++P K +  L+++ +A+AV  EK + ++L +PNNP G+ I   +L + 
Sbjct:   119 PVVTMMNGIAR-EIPLK-EHRLDLKTMAEAVN-EKTRLVYLCNPNNPTGTYITKGELEEF 175

Query:   244 LE-MP--ILVVLDEAYTEFSGL----ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296
             LE +P  ++VVLDEAY EF+ L       + + KK  N +VLRTFSK  GLAGLRVGYG 
Sbjct:   176 LERVPEEVVVVLDEAYFEFARLFNDYPDGLNFFKKRPNTVVLRTFSKAYGLAGLRVGYGF 235

Query:   297 FPLSIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYL-EVKEALIKERERLFKLLKDVPFL 355
              P ++ + +   + P+N            L +  Y+ EV +   + ++ L++ +  +  L
Sbjct:   236 APENLAKAINSLRPPFNVNFLAQMAAVAALDDEEYVREVVKNTDEGKKFLYQEIIRMG-L 294

Query:   356 NPYPSYSNFILCEVTSGMXXXXXXXXXXXMGVMIRHYNNKELKGYVRVSVGKP 408
             +  PS +NF++  + +              GV++R  +   +  ++RV+VG P
Sbjct:   295 SYIPSAANFLM--IKTEKPSALVFRELLKRGVIVRSGDIFGMDDWIRVTVGTP 345

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004400 "histidinol-phosphate transaminase activity" evidence=ISS

ASPGD|ASPL0000053485 AN0717 [Emericella nidulans (taxid:162425)]

 Score = 383 (139.9 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
 Identities = 95/266 (35%), Positives = 140/266 (52%)

Query:   126 YPDPESRRLRAALAK--------DSGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDC 176
             YPDP    L+             D  +  +++ VG G+DE ID ++R    PG DKI+ C
Sbjct:   104 YPDPHQHPLKQLFCNIRNTHTHTDKTITPENLFVGVGSDEAIDALLRAFCVPGKDKILTC 163

Query:   177 PPTFTMYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVEREKP-KCIFLTSPNNPDGS 233
             PPT+ MY   A VN   +VKVP  +D  F+L  E I  A+  +   K +++ SP NP  +
Sbjct:   164 PPTYGMYSVSADVNDVEIVKVPLDTDNGFALQPEKINAALSADPTIKLVYICSPGNPTAT 223

Query:   234 IINDEDLLKILEMPI---LVVLDEAYTEFSGLESRM-EWVKKHDNLIVLRTFSKRAGLAG 289
             +++  D+ K+LE P    +VVLDEAY +F+   S + EWV +  NL+V++T SK  GLAG
Sbjct:   224 LVSKSDIQKVLEHPTWNGVVVLDEAYIDFAPEGSSLAEWVAEWPNLVVMQTLSKAFGLAG 283

Query:   290 LRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYLEV----KEALIKERERL 345
             +R+G       I   L   K PYN            L NP  LEV    +  +I +R+R+
Sbjct:   284 IRLGVAFTSPEIATLLNSLKAPYNISSPTSALAMAALGNPKNLEVMRSYRSKIIAQRDRI 343

Query:   346 FKLLKDVPFLNPYP--SYSNFILCEV 369
              K L  +P +  +   + SNF+L E+
Sbjct:   344 LKELPSIPGIGRFRGGTESNFLLVEI 369

GO:0006547 "histidine metabolic process" evidence=RCA

GO:0004400 "histidinol-phosphate transaminase activity" evidence=RCA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0000105 "histidine biosynthetic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0010045 "response to nickel cation" evidence=IEA

TIGR_CMR|SPO_3177 SPO_3177 "histidinol-phosphate aminotransferase" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 96/329 (29%), Positives = 168/329 (51%)

Query:    96 DIVKIDANENPYGPPPEVREAL-GQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCG 154
             +++K+ +NENP GP P   EA+       + YP  +   LRAA+    GL+ D I+ G G
Sbjct:    28 NVIKLSSNENPLGPSPAAVEAIRATAAQAHRYPSTDHAELRAAIGAVHGLDPDRIICGVG 87

Query:   155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAV 214
             +DE++  + +    PGD+++     F+MY   A + GA  V+VP +    ++V+ I  AV
Sbjct:    88 SDEVLQFVAQAYTGPGDEVIHTEHGFSMYPILARMAGATPVQVPERQRV-VDVDAILAAV 146

Query:   215 EREKPKCIFLTSPNNPDGSIINDEDLLKILE-MP--ILVVLDEAYTEF-SGLESRMEWVK 270
               ++ + +FL +P NP G++I++ ++ ++ + +P  +L+VLD AY EF  G +     V 
Sbjct:   147 N-DRTRLVFLANPANPTGTMISEAEVTRLADGLPGHVLLVLDGAYAEFVEGFDGGAALVS 205

Query:   271 KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXXLQNPI 330
               DN+I+ RTFSK  GL GLR+G+G  P  II+ L R +QP+N            +++  
Sbjct:   206 ARDNVIMTRTFSKIYGLGGLRIGWGYAPREIIDVLNRIRQPFNLSTMQLAAAEAAVRDQD 265

Query:   331 YL-EVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMXXXXXXXXXXXMGVMI 389
             ++   ++     R  L   L ++   +   S +NFIL                   G+++
Sbjct:   266 WVARCRDQNTTWRTWLAARLAELGVPSDV-SCANFILARFADQGEAEACDLFLQSRGLIV 324

Query:   390 RHYNNKELKGYVRVSVGKPEHTDALMECL 418
             R      L   +R++VG      A+++ +
Sbjct:   325 RRVAGYNLPQALRITVGDEAGCRAVVDAV 353

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004400 "histidinol-phosphate transaminase activity" evidence=ISS

TIGR_CMR|BA_2955 BA_2955 "histidinol-phosphate aminotransferase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 109/363 (30%), Positives = 174/363 (47%)

Query:    67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPY-I 125
             ++  L  L+PY+P    E +    G      VK+ +NENP+G  P V + L +    + +
Sbjct:     3 VKDQLSSLQPYKPGKSPEQMKEVYG--DHSFVKLASNENPFGCSPRVLDELQKSWLDHAL 60

Query:   126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
             YPD  +  LR  +A    ++ + +L G G DE+I +I R VL  GD IV    TF  Y  
Sbjct:    61 YPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQMISRAVLKAGDNIVTAGATFPQYRH 120

Query:   186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
              A + G  V +V   +    +++ I+  V+ +  K +++ +PNNP G+ +ND  L + +E
Sbjct:   121 HAIIEGCEVKEVALNNGV-YDLDEISSVVDNDT-KIVWICNPNNPTGTYVNDRKLTQFIE 178

Query:   246 ---MPILVVLDEAYTEF---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
                   L+V+DEAY E+         +  ++KH N++VLRTFSK  GLA  RVGY     
Sbjct:   179 GISENTLIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHE 238

Query:   300 SIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYLE----VKEALIKERERLFKLLKDVPFL 355
              +IE L   + P+N              +  ++E    V    +++ E   K   ++PF 
Sbjct:   239 ELIEKLNVVRLPFNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKE-NEIPF- 296

Query:   356 NPYPSYSNFILCEVTSGMXXXXXXXXXXXMGVMIRHYNNKELKGYVRVSVGKPEHTDALM 415
               Y S +NFI   V +G             G +IR + N    G VR++VG  E  + ++
Sbjct:   297 --YQSQTNFIFLPVENG---GEIYEACAHAGFIIRPFPN----G-VRITVGTREQNEGVI 346

Query:   416 ECL 418
               L
Sbjct:   347 SVL 349

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004400 "histidinol-phosphate transaminase activity" evidence=ISS

TIGR_CMR|DET_0655 DET_0655 "histidinol-phosphate aminotransferase, putative" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
 Identities = 103/342 (30%), Positives = 167/342 (48%)

Query:    68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYP 127
             +  + KLKP     P      +LG  P+ ++    + NPY  P E++ AL  L     YP
Sbjct:     6 KPQVEKLKPCYHGGPNYAELRKLGISPDAVMDFSVSSNPYPAPVELKNALCSLVIDR-YP 64

Query:   128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA 187
             D +S  L+  LA    L+ +++++G G+ E+I L+       GD ++   PTF  YE  A
Sbjct:    65 DSDSAELKEYLAGRLSLKPENLIMGNGSMEIIRLVAGAYFGVGDTVLILKPTFGEYELAA 124

Query:   188 AVNGAAVVK--VPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
              V GA +++     +S F  +++L    +++ +PK +F+ +PNNP G  ++  D+ K+L 
Sbjct:   125 EVAGADIIEQWADEESGFKFDLDLTCRIIKKHQPKAVFICNPNNPTGVYLSKADIEKVLS 184

Query:   246 M--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
             +    L+VLDEAY  F+    +   + +  N+IV+R+ +K   LAGLR+GYG     II 
Sbjct:   185 VCTDTLLVLDEAYIAFAEGGWKSTDLLETGNIIVIRSMTKDCALAGLRLGYGMASAEIIT 244

Query:   304 YLWRAKQPYNXXXXXXXXXXXXLQNPIYLEVKEALIK-ERERLFKLLKDVPFLNPYPSYS 362
              L +   P+N            L +P YL   E  IK  +E L +    + F    PS +
Sbjct:   245 NLKKVCPPWNVNSAAQKAGLVCLCHPSYLAESEKKIKASKEYLRQGFAGLGF-RVLPSET 303

Query:   363 NFILCEVTSGMXXXXXXXXXXXMGVMIRHYNNKELKGYVRVS 404
             NF L +V                G+M+R   +  L  YVR++
Sbjct:   304 NFFLLKVKKAADFRSALLKH---GLMVRDCTSFGLPQYVRIA 342

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004400 "histidinol-phosphate transaminase activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q58365	HIS8_METJA	2, ., 6, ., 1, ., 9	0.3869	0.8293	0.9383	yes	no
P61003	HIS8_METMP	2, ., 6, ., 1, ., 9	0.3665	0.8507	0.9676	yes	no
A6VGF6	HIS8_METM7	2, ., 6, ., 1, ., 9	0.3559	0.8436	0.9595	yes	no
A8YZZ5	HIS8_STAAT	2, ., 6, ., 1, ., 9	0.3719	0.8080	0.9687	yes	no
A6UTL8	HIS8_META3	2, ., 6, ., 1, ., 9	0.3621	0.8530	0.9703	yes	no
O27624	HIS8_METTH	2, ., 6, ., 1, ., 9	0.3616	0.8317	0.9410	yes	no
A6QF32	HIS8_STAAE	2, ., 6, ., 1, ., 9	0.3719	0.8080	0.9687	yes	no
O82030	HIS8_TOBAC	2, ., 6, ., 1, ., 9	0.7735	0.9739	0.9951	N/A	no
Q2G087	HIS8_STAA8	2, ., 6, ., 1, ., 9	0.3719	0.8080	0.9687	yes	no
A5IQS7	HIS8_STAA9	2, ., 6, ., 1, ., 9	0.3719	0.8080	0.9687	yes	no
Q4L4E7	HIS8_STAHJ	2, ., 6, ., 1, ., 9	0.3698	0.8033	0.9658	yes	no
A6TZK2	HIS8_STAA2	2, ., 6, ., 1, ., 9	0.3719	0.8080	0.9687	yes	no
P67724	HIS8_STAAM	2, ., 6, ., 1, ., 9	0.3719	0.8080	0.9687	yes	no
P67725	HIS8_STAAN	2, ., 6, ., 1, ., 9	0.3719	0.8080	0.9687	yes	no
Q46E46	HIS8_METBF	2, ., 6, ., 1, ., 9	0.3526	0.8341	0.9617	yes	no
Q2YSI3	HIS8_STAAB	2, ., 6, ., 1, ., 9	0.3719	0.8080	0.9687	yes	no
Q8NXN3	HIS8_STAAW	2, ., 6, ., 1, ., 9	0.3719	0.8080	0.9687	yes	no
A7WZL0	HIS8_STAA1	2, ., 6, ., 1, ., 9	0.3719	0.8080	0.9687	yes	no
Q3Z879	HIS8_DEHE1	2, ., 6, ., 1, ., 9	0.4061	0.8246	0.9720	yes	no
Q8PX17	HIS8_METMA	2, ., 6, ., 1, ., 9	0.3801	0.8341	0.9565	yes	no
A6UPL6	HIS8_METVS	2, ., 6, ., 1, ., 9	0.3648	0.8530	0.9703	yes	no
Q6GBA6	HIS8_STAAS	2, ., 6, ., 1, ., 9	0.3719	0.8080	0.9687	yes	no
P0DI07	HIS8B_ARATH	2, ., 6, ., 1, ., 9	0.7547	0.9834	0.9952	yes	no
Q5HR08	HIS8_STAEQ	2, ., 6, ., 1, ., 9	0.3526	0.8080	0.9715	yes	no
Q2NEQ0	HIS8_METST	2, ., 6, ., 1, ., 9	0.3296	0.8293	0.9536	yes	no
A5V022	HIS8_ROSS1	2, ., 6, ., 1, ., 9	0.4822	0.8364	0.9540	yes	no
P17731	HIS8_BACSU	2, ., 6, ., 1, ., 9	0.3360	0.8199	0.9611	yes	no
Q9FEW2	HIS8_NICPL	2, ., 6, ., 1, ., 9	0.7783	0.9739	0.9951	N/A	no
B2UPR9	HIS8_AKKM8	2, ., 6, ., 1, ., 9	0.3638	0.8317	0.9669	yes	no
A7NFV2	HIS8_ROSCS	2, ., 6, ., 1, ., 9	0.4889	0.8364	0.9514	yes	no
Q5HHU9	HIS8_STAAC	2, ., 6, ., 1, ., 9	0.3719	0.8080	0.9687	yes	no
A9AA96	HIS8_METM6	2, ., 6, ., 1, ., 9	0.3557	0.8507	0.9676	yes	no
Q8TUE9	HIS8_METAC	2, ., 6, ., 1, ., 9	0.3746	0.8341	0.9591	yes	no
A4FWW1	HIS8_METM5	2, ., 6, ., 1, ., 9	0.3614	0.8436	0.9595	yes	no
B9DHD3	HIS8A_ARATH	2, ., 6, ., 1, ., 9	0.7547	0.9834	0.9952	yes	no
C5D3D2	HIS8_GEOSW	2, ., 6, ., 1, ., 9	0.3434	0.8222	0.9506	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.6.1	0.983
4th Layer	2.6.1.9	0.979

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	422
PLN03026	380	PLN03026, PLN03026, histidinol-phosphate aminotran	0.0
TIGR01141	346	TIGR01141, hisC, histidinol-phosphate aminotransfe	1e-114
COG0079	356	COG0079, HisC, Histidinol-phosphate/aromatic amino	1e-107
PRK00950	361	PRK00950, PRK00950, histidinol-phosphate aminotran	1e-102
PRK02731	367	PRK02731, PRK02731, histidinol-phosphate aminotran	2e-93
PRK03158	359	PRK03158, PRK03158, histidinol-phosphate aminotran	1e-88
PRK04870	356	PRK04870, PRK04870, histidinol-phosphate aminotran	3e-76
PRK14807	351	PRK14807, PRK14807, histidinol-phosphate aminotran	7e-76
PRK03967	337	PRK03967, PRK03967, histidinol-phosphate aminotran	2e-73
cd00609	350	cd00609, AAT_like, Aspartate aminotransferase fami	1e-71
PRK05166	371	PRK05166, PRK05166, histidinol-phosphate aminotran	7e-65
PRK03321	352	PRK03321, PRK03321, putative aminotransferase; Pro	1e-64
PRK02610	374	PRK02610, PRK02610, histidinol-phosphate aminotran	4e-60
PRK03317	368	PRK03317, PRK03317, histidinol-phosphate aminotran	5e-60
PRK05387	353	PRK05387, PRK05387, histidinol-phosphate aminotran	1e-56
PRK01688	351	PRK01688, PRK01688, histidinol-phosphate aminotran	5e-56
TIGR01140	330	TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phospha	7e-54
PRK14809	357	PRK14809, PRK14809, histidinol-phosphate aminotran	1e-53
pfam00155	357	pfam00155, Aminotran_1_2, Aminotransferase class I	2e-51
PRK04635	354	PRK04635, PRK04635, histidinol-phosphate aminotran	4e-51
PRK08153	369	PRK08153, PRK08153, histidinol-phosphate aminotran	4e-48
PRK06358	354	PRK06358, PRK06358, threonine-phosphate decarboxyl	8e-48
PRK01533	366	PRK01533, PRK01533, histidinol-phosphate aminotran	1e-47
PRK04781	364	PRK04781, PRK04781, histidinol-phosphate aminotran	2e-47
COG0436	393	COG0436, COG0436, Aspartate/tyrosine/aromatic amin	6e-46
PRK09105	370	PRK09105, PRK09105, putative aminotransferase; Pro	4e-41
PRK07392	360	PRK07392, PRK07392, threonine-phosphate decarboxyl	8e-37
PRK14808	335	PRK14808, PRK14808, histidinol-phosphate aminotran	5e-34
PRK06225	380	PRK06225, PRK06225, aspartate aminotransferase; Pr	8e-30
PRK08056	356	PRK08056, PRK08056, threonine-phosphate decarboxyl	3e-27
PRK08354	311	PRK08354, PRK08354, putative aminotransferase; Pro	9e-24
PRK06836	394	PRK06836, PRK06836, aspartate aminotransferase; Pr	1e-22
PRK07683	387	PRK07683, PRK07683, aminotransferase A; Validated	2e-21
COG1167	459	COG1167, ARO8, Transcriptional regulators containi	1e-20
PRK05764	393	PRK05764, PRK05764, aspartate aminotransferase; Pr	4e-20
PRK07682	378	PRK07682, PRK07682, hypothetical protein; Validate	2e-19
PRK07309	391	PRK07309, PRK07309, aromatic amino acid aminotrans	8e-18
PRK06108	382	PRK06108, PRK06108, aspartate aminotransferase; Pr	2e-16
PRK08361	391	PRK08361, PRK08361, aspartate aminotransferase; Pr	2e-16
PRK05957	389	PRK05957, PRK05957, aspartate aminotransferase; Pr	1e-15
PLN00175	413	PLN00175, PLN00175, aminotransferase family protei	3e-15
PRK06348	384	PRK06348, PRK06348, aspartate aminotransferase; Pr	1e-14
PRK07568	397	PRK07568, PRK07568, aspartate aminotransferase; Pr	2e-14
TIGR03539	357	TIGR03539, DapC_actino, succinyldiaminopimelate tr	3e-13
TIGR03538	393	TIGR03538, DapC_gpp, succinyldiaminopimelate trans	5e-13
PRK07681	399	PRK07681, PRK07681, aspartate aminotransferase; Pr	8e-13
TIGR03540	383	TIGR03540, DapC_direct, LL-diaminopimelate aminotr	2e-12
PRK07908	349	PRK07908, PRK07908, hypothetical protein; Provisio	2e-12
PRK07777	387	PRK07777, PRK07777, aminotransferase; Validated	2e-12
TIGR03537	350	TIGR03537, DapC, succinyldiaminopimelate transamin	1e-11
PRK08363	398	PRK08363, PRK08363, alanine aminotransferase; Vali	2e-11
COG1168	388	COG1168, MalY, Bifunctional PLP-dependent enzyme w	6e-11
PRK06107	402	PRK06107, PRK06107, aspartate aminotransferase; Pr	2e-10
PRK07865	364	PRK07865, PRK07865, N-succinyldiaminopimelate amin	2e-10
PRK08175	395	PRK08175, PRK08175, aminotransferase; Validated	7e-10
TIGR03947	359	TIGR03947, viomycin_VioD, capreomycidine synthase	2e-09
PRK07550	386	PRK07550, PRK07550, hypothetical protein; Provisio	2e-09
TIGR01265	403	TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine	4e-09
PRK09082	386	PRK09082, PRK09082, methionine aminotransferase; V	7e-09
PRK12414	384	PRK12414, PRK12414, putative aminotransferase; Pro	3e-08
PLN02376	496	PLN02376, PLN02376, 1-aminocyclopropane-1-carboxyl	3e-08
PRK09276	385	PRK09276, PRK09276, LL-diaminopimelate aminotransf	3e-08
PRK07324	373	PRK07324, PRK07324, transaminase; Validated	1e-07
PRK06425	332	PRK06425, PRK06425, histidinol-phosphate aminotran	1e-07
PRK08068	389	PRK08068, PRK08068, transaminase; Reviewed	1e-07
PRK05664	330	PRK05664, PRK05664, threonine-phosphate decarboxyl	2e-07
PRK07337	388	PRK07337, PRK07337, aminotransferase; Validated	4e-07
PRK08960	387	PRK08960, PRK08960, hypothetical protein; Provisio	1e-06
PRK09440	416	PRK09440, avtA, valine--pyruvate transaminase; Pro	2e-06
PRK05839	374	PRK05839, PRK05839, hypothetical protein; Provisio	3e-06
PLN02656	409	PLN02656, PLN02656, tyrosine transaminase	3e-06
TIGR03542	402	TIGR03542, DAPAT_plant, LL-diaminopimelate aminotr	5e-06
PLN00145	430	PLN00145, PLN00145, tyrosine/nicotianamine aminotr	6e-06
TIGR04350	384	TIGR04350, C_S_lyase_PatB, putative C-S lyase	2e-05
PRK08912	387	PRK08912, PRK08912, hypothetical protein; Provisio	2e-05
COG3977	417	COG3977, COG3977, Alanine-alpha-ketoisovalerate (o	5e-05
PRK09147	396	PRK09147, PRK09147, succinyldiaminopimelate transa	9e-05
PRK05942	394	PRK05942, PRK05942, aspartate aminotransferase; Pr	9e-05
PRK07590	409	PRK07590, PRK07590, L,L-diaminopimelate aminotrans	1e-04
PLN02187	462	PLN02187, PLN02187, rooty/superroot1	1e-04
PRK13355	517	PRK13355, PRK13355, bifunctional HTH-domain contai	1e-04
PRK09148	405	PRK09148, PRK09148, aminotransferase; Validated	3e-04
PRK09265	404	PRK09265, PRK09265, aminotransferase AlaT; Validat	3e-04
PLN00143	409	PLN00143, PLN00143, tyrosine/nicotianamine aminotr	5e-04
PLN02607	447	PLN02607, PLN02607, 1-aminocyclopropane-1-carboxyl	6e-04
PTZ00433	412	PTZ00433, PTZ00433, tyrosine aminotransferase; Pro	0.001
TIGR01977	376	TIGR01977, am_tr_V_EF2568, cysteine desulfurase fa	0.001
TIGR01264	401	TIGR01264, tyr_amTase_E, tyrosine aminotransferase	0.001
PRK06959	339	PRK06959, PRK06959, putative threonine-phosphate d	0.003

>gnl|CDD|178597 PLN03026, PLN03026, histidinol-phosphate aminotransferase; Provisional

 Score =  701 bits (1810), Expect = 0.0
 Identities = 303/372 (81%), Positives = 335/372 (90%), Gaps = 1/372 (0%)

Query: 52  QQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPP 111
             ++E ++  +GDSFIR H+ +L PYQPILPFEVLS QLGRKPEDIVK+DANENPYGPPP
Sbjct: 9   TAMSEVKQSTSGDSFIRKHILQLAPYQPILPFEVLSAQLGRKPEDIVKLDANENPYGPPP 68

Query: 112 EVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD 171
           EV EALG +KFPY+YPDPESRRLRAALA+DSGLES++ILVGCGADELIDL+MRCVLDPGD
Sbjct: 69  EVLEALGNMKFPYVYPDPESRRLRAALAEDSGLESENILVGCGADELIDLLMRCVLDPGD 128

Query: 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD 231
           KI+DCPPTF MY FDAAVNGA V+KVPR  DFSL+V  I +AVE  KPK +FLTSPNNPD
Sbjct: 129 KIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETHKPKLLFLTSPNNPD 188

Query: 232 GSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLR 291
           GSII+D+DLLKILE+PILVVLDEAY EFS  ESRM+WVKK+DNLIVLRTFSKRAGLAGLR
Sbjct: 189 GSIISDDDLLKILELPILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLR 248

Query: 292 VGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLK 350
           VGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAAL NP YLE VK AL++ERERLF LLK
Sbjct: 249 VGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLK 308

Query: 351 DVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEH 410
           +VPFL PYPS +NFILC VTSG DAKKLK+DLAKMGVM+RHYN+KELKGY+RVSVGKPEH
Sbjct: 309 EVPFLEPYPSDANFILCRVTSGRDAKKLKEDLAKMGVMVRHYNSKELKGYIRVSVGKPEH 368

Query: 411 TDALMECLMHLY 422
           TDALME L  LY
Sbjct: 369 TDALMEALKQLY 380

Length = 380

>gnl|CDD|233290 TIGR01141, hisC, histidinol-phosphate aminotransferase

 Score =  336 bits (864), Expect = e-114
 Identities = 144/357 (40%), Positives = 217/357 (60%), Gaps = 18/357 (5%)

Query: 68  RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFP-YIY 126
           R  ++ L PYQP               ++++K+++NENP+GPPP+ +EAL       + Y
Sbjct: 1   RPDIKNLSPYQPARELGG---------KEVIKLNSNENPFGPPPKAKEALRAEADKLHRY 51

Query: 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           PDP+   L+ ALA   G++ + IL+G G+DE+I+L++R  L+PGD ++  PPT++MYE  
Sbjct: 52  PDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYEIS 111

Query: 187 AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246
           A ++GA VVKVP   D  L++E I  A++ +KPK +FL SPNNP G++++  D+  +LE 
Sbjct: 112 AKIHGAEVVKVPLDEDGQLDLEDILVAID-DKPKLVFLCSPNNPTGNLLSRSDIEAVLER 170

Query: 247 PI---LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
                LVV+DEAY EFSG  S +  + ++ NLIVLRT SK  GLAGLR+GY      II+
Sbjct: 171 TPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIID 230

Query: 304 YLWRAKQPYNVSVAAEVAACAALQNP-IYLEVKEALIKERERLFKLLKDVPFLNPYPSYS 362
            L + + P+N+S  A+ AA AAL++     +  E +  ERERL+  LK +P L  YPS +
Sbjct: 231 ALNKVRAPFNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEVYPSDA 290

Query: 363 NFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE-LKGYVRVSVGKPEHTDALMECL 418
           NF+L       DA  L + L + G+++R  N+   L   +R++VG  E  D  +  L
Sbjct: 291 NFVLIRF--PRDADALFEALLEKGIIVRDLNSYPGLPNCLRITVGTREENDRFLAAL 345

Alternate names: histidinol-phosphate transaminase; imidazole acetol-phosphate transaminase Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme [Amino acid biosynthesis, Histidine family]. Length = 346

>gnl|CDD|223157 COG0079, HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

 Score =  321 bits (825), Expect = e-107
 Identities = 157/359 (43%), Positives = 220/359 (61%), Gaps = 19/359 (5%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYI 125
           +R  +R L PY P                 I+K+ +NENPYGPPP+V EA+   L     
Sbjct: 2   LRPLVRDLPPYVPG--------ARQYGLPGIIKLSSNENPYGPPPKVIEAIRAALDKLNR 53

Query: 126 YPDPESRRLRAALA-KDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE 184
           YPDP+ R LRAALA     ++ +++LVG G+DELI+L++R  ++PGD ++   PTF+MYE
Sbjct: 54  YPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYE 113

Query: 185 FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244
             A + GA VVKVP K +F L+++ I  A+ R+K K +FL +PNNP G+++  E+L  +L
Sbjct: 114 IAAQLAGAEVVKVPLK-EFRLDLDAILAAI-RDKTKLVFLCNPNNPTGTLLPREELRALL 171

Query: 245 EMP---ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301
           E      LVV+DEAY EFS  ES +E +K   NLIVLRTFSK  GLAGLRVGY      +
Sbjct: 172 EALPEGGLVVIDEAYIEFSP-ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPEL 230

Query: 302 IEYLWRAKQPYNVSVAAEVAACAALQNPIYL-EVKEALIKERERLFKLLKDVPFLNPYPS 360
           I  L + + P+NVS  A  AA AAL++  YL E  E + +ERERL+  LK +     +PS
Sbjct: 231 IAALNKVRPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKALGLFGVFPS 290

Query: 361 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKEL-KGYVRVSVGKPEHTDALMECL 418
            +NF+L  V    +A  L + L K G+++R  ++  L  GY+R++VG PE  D L+  L
Sbjct: 291 QANFVLVRVPDA-EAAALAEALLKKGILVRDCSSVGLLPGYLRITVGTPEENDRLLAAL 348

Length = 356

>gnl|CDD|234872 PRK00950, PRK00950, histidinol-phosphate aminotransferase; Validated

 Score =  306 bits (787), Expect = e-102
 Identities = 149/349 (42%), Positives = 222/349 (63%), Gaps = 13/349 (3%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYI 125
           IR+ ++++KPY P    E ++ + G  PE I+K+ +NENP GP P+  EA+ + L   + 
Sbjct: 6   IRAEVKEIKPYVPGKSKEEIAREYGIDPESIIKLGSNENPLGPSPKAVEAIEKELSKIHR 65

Query: 126 YPDPESRRLRAALAKDSGLESDHILV-GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE 184
           YP+P++  LR AL+K +G+  ++I+V G G DE+ID +MR  +DPGD+++   PTF+ YE
Sbjct: 66  YPEPDAPELREALSKYTGVPVENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYE 125

Query: 185 FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244
             A  +GA  V   R+ DFSL+V+ + +A+  EK K IFL +PNNP G++I +ED+ KIL
Sbjct: 126 ISAKAHGAKPVYAKREEDFSLDVDSVLNAIT-EKTKVIFLCTPNNPTGNLIPEEDIRKIL 184

Query: 245 E-MPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
           E    LV +DEAY EF+  +       ++DNLI+ RTFSK  GLAGLR+GYG  P  +I+
Sbjct: 185 ESTDALVFVDEAYVEFAEYDYT-PLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLID 243

Query: 304 YLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYS 362
           Y  RAK P++++  ++ AA AAL +  Y+E   E  IK RE L+  L        YPS +
Sbjct: 244 YYMRAKTPFSLTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP----FKVYPSEA 299

Query: 363 NFILCEVTSGMDAKKLKDDLAKMGVMIRH-YNNKELKG-YVRVSVGKPE 409
           NF+L +VT  M AK+  ++L K GV++R   + + L   Y+RVS+G  E
Sbjct: 300 NFVLVDVT-PMTAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIGTFE 347

Length = 361

>gnl|CDD|235064 PRK02731, PRK02731, histidinol-phosphate aminotransferase; Validated

 Score =  285 bits (732), Expect = 2e-93
 Identities = 128/359 (35%), Positives = 196/359 (54%), Gaps = 13/359 (3%)

Query: 68  RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREAL-GQLKFPYIY 126
              +  + PY P  P E L  + G    DI+K+ +NENP GP P+  EA+       + Y
Sbjct: 7   NPGILDIAPYVPGKPIEELVREYG--IADIIKLASNENPLGPSPKAIEAIRAAADELHRY 64

Query: 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           PD     L+AALA+  G++ + I++G G+DE+++L+ R  L PGD+++     F +Y   
Sbjct: 65  PDGSGFELKAALAEKFGVDPERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPIA 124

Query: 187 AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE- 245
           A   GA  V+VP K D+  +++ +  AV   + + +F+ +PNNP G+ +  E++ + L  
Sbjct: 125 AQAVGAKPVEVPAK-DYGHDLDAMLAAVT-PRTRLVFIANPNNPTGTYLPAEEVERFLAG 182

Query: 246 MP--ILVVLDEAYTEF---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300
           +P  +LVVLDEAY E+      E  +E V K  N++V RTFSK  GLAGLRVGYG  P  
Sbjct: 183 VPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPPE 242

Query: 301 IIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYP 359
           II+ L R +QP+NV+  A  AA AAL +  ++E  +    +    L + L ++  L   P
Sbjct: 243 IIDALNRVRQPFNVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAELG-LEYIP 301

Query: 360 SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 418
           S  NFIL +   G DA +    L K GV++R      L   +R+++G  E     +  L
Sbjct: 302 SVGNFILVDFDDGKDAAEAYQALLKRGVIVRPVAGYGLPNALRITIGTEEENRRFLAAL 360

Length = 367

>gnl|CDD|235106 PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional

 Score =  272 bits (698), Expect = 1e-88
 Identities = 141/363 (38%), Positives = 210/363 (57%), Gaps = 15/363 (4%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREAL-GQLKFPYI 125
           ++  L +L  YQP    E +  + G   E IVK+ +NENPYGP P+V+EA+   L    +
Sbjct: 3   MKEQLNQLSAYQPGKSIEEVKREYGL--EKIVKLASNENPYGPSPKVKEAIAAHLDELAL 60

Query: 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
           YPD  +  LR  +AK  G++ + +L G G DE+I +I R +L+PG   V   PTF+ Y  
Sbjct: 61  YPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYRH 120

Query: 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
           +A + GA V +VP K D   ++E +  A++ E+ K +++ +PNNP G+ +N E+LL  LE
Sbjct: 121 NAIIEGAEVREVPLK-DGGHDLEAMLKAID-EQTKIVWICNPNNPTGTYVNHEELLSFLE 178

Query: 246 -MP--ILVVLDEAYTEFSGLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
            +P  +LVVLDEAY E+   E     +  ++K++NLIVLRTFSK  GLA LRVGYG    
Sbjct: 179 SVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE 238

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYL-EVKEALIKERERLFKLLKDVPFLNPY 358
            +IE L  A+ P+N +  A+ AA AAL++  +L E  E   +  E+ +   K+   L  Y
Sbjct: 239 ELIEKLNIARPPFNTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEYG-LFYY 297

Query: 359 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 418
           PS +NFI  +   G DA +L + L K G ++R          VR+++G  E  D ++E L
Sbjct: 298 PSQTNFIFVDT--GRDANELFEALLKKGYIVRSGAALGFPTGVRITIGLKEQNDKIIELL 355

Query: 419 MHL 421
             L
Sbjct: 356 KEL 358

Length = 359

>gnl|CDD|179888 PRK04870, PRK04870, histidinol-phosphate aminotransferase; Provisional

 Score =  240 bits (616), Expect = 3e-76
 Identities = 123/337 (36%), Positives = 182/337 (54%), Gaps = 13/337 (3%)

Query: 94  PEDIVKIDANENPYGPPPEVREALGQ-LKFPYI--YPDPESRRLRAALAKDSGL-ESDHI 149
              +VK+DA ENPY  P E+R  LG+ L    +  YPDP +  L+AAL    G+     +
Sbjct: 25  ATGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPDPRAAALKAALRAAMGVPAGADV 84

Query: 150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVEL 209
           L+G G+DELI L+      PG  ++   P F MY   A + G   V VP  +DF+L++  
Sbjct: 85  LLGNGSDELIQLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPA 144

Query: 210 IADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE-MPILVVLDEAYTEFSGLESRMEW 268
           +  A+   +P  +FL  PNNP G++ +D D+ +I+E  P LVV+DEAY  F+G +S +  
Sbjct: 145 MLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAG-DSWLPR 203

Query: 269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN 328
           + +  NL+V+RT SK  GLAGLR+GY A   + I  L + + PYNV+V  +  A  AL++
Sbjct: 204 LARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAELDKVRPPYNVNVLTQATALFALEH 262

Query: 329 -PIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGV 387
             +       L  ER RL   L  +P +  +PS +NFIL  V    DA  + D L   GV
Sbjct: 263 VDVLDAQAAQLRAERTRLAAALAALPGVTVFPSAANFILVRVP---DAAAVFDGLKTRGV 319

Query: 388 MIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY 422
           ++++ +     L   +RV+VG PE     +  L    
Sbjct: 320 LVKNLSGMHPLLANCLRVTVGTPEENAQFLAALKAAL 356

Length = 356

>gnl|CDD|184829 PRK14807, PRK14807, histidinol-phosphate aminotransferase; Provisional

 Score =  239 bits (612), Expect = 7e-76
 Identities = 124/328 (37%), Positives = 193/328 (58%), Gaps = 9/328 (2%)

Query: 99  KIDANENPYGPPPEVREALGQLKFPY---IYPDPESRRLRAALAKDSGLESDHILVGCGA 155
           K+DANE P+  P EV + + ++       IYPDP + +LR  LA+   +   +I VG G+
Sbjct: 26  KMDANETPFELPEEVIKNIQEIVKSSQVNIYPDPTAEKLREELARYCSVVPTNIFVGNGS 85

Query: 156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE 215
           DE+I LIM   ++ GD ++   P+F MY   + + GA  + V  K D++ +V      +E
Sbjct: 86  DEIIHLIMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIE 145

Query: 216 REKPKCIFLTSPNNPDGSIINDEDLLKILEMPI-LVVLDEAYTEFSGLESRMEWVKKHDN 274
           + +PK +FL +PNNP GS+I  ED++KI+E    +VV+DEAY EF G  + ++ + + +N
Sbjct: 146 KYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYG-NTIVDVINEFEN 204

Query: 275 LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEV 334
           LIVLRT SK  GLAGLRVGY     +I++YL   K PYN++  ++V A   L+  +  E 
Sbjct: 205 LIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKSPYNINSLSQVIALKVLRTGVLKER 264

Query: 335 KEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN 394
              ++ ERERL K L  +P +  YPS +NFIL +     DA  +   L + G+++R ++ 
Sbjct: 265 VNYILNERERLIKELSKIPGIKVYPSKTNFILVKFK---DADYVYQGLLERGILVRDFSK 321

Query: 395 -KELKGYVRVSVGKPEHTDALMECLMHL 421
            + L+G +R++V   E  D L+  L  L
Sbjct: 322 VEGLEGALRITVSSCEANDYLINGLKEL 349

Length = 351

>gnl|CDD|167650 PRK03967, PRK03967, histidinol-phosphate aminotransferase; Provisional

 Score =  233 bits (595), Expect = 2e-73
 Identities = 131/350 (37%), Positives = 203/350 (58%), Gaps = 32/350 (9%)

Query: 79  PILPFEVLSIQLGRKPEDIVKI--DANENPYGPPPEVREALGQL-------KFPYIYPDP 129
            I    V S +  R  E   +I  D NENP+  P E++E + +        ++P+I  DP
Sbjct: 1   MIRE-LVKSFKPYRVVEGNYRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPHITSDP 59

Query: 130 ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV 189
               LR A+A+  GL++++I VG G+DELI  +++  L  G  IV  PPTF MY F A +
Sbjct: 60  ----LREAIAEFYGLDAENIAVGNGSDELISYLVK--LFEGKHIVITPPTFGMYSFYAKL 113

Query: 190 NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPIL 249
           NG  V+ VP K DF+++ E IA+  + +    +F+ SPNNP G++  +E++LK+LE    
Sbjct: 114 NGIPVIDVPLKEDFTIDGERIAE--KAKNASAVFICSPNNPTGNLQPEEEILKVLETGKP 171

Query: 250 VVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309
           VVLDEAY EFSG +S +  + ++ NLI+LRTFSK  GLAG+R GY      II+ L+R K
Sbjct: 172 VVLDEAYAEFSG-KSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIK 230

Query: 310 QPYNVSVAAEVAACAALQNP-IYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCE 368
            P+++++        AL +  +  E  + +IKERER+ + L +      YPS +NF+L +
Sbjct: 231 PPFSLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY----AYPSDANFLLLK 286

Query: 369 VTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 418
                      D L + G+++R  + + L+G++RV+VGK E  D  ++ L
Sbjct: 287 -------LDAYDYLLENGIVVRKLSGR-LEGHIRVTVGKREENDEFIKAL 328

Length = 337

>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family

 Score =  228 bits (583), Expect = 1e-71
 Identities = 107/348 (30%), Positives = 178/348 (51%), Gaps = 27/348 (7%)

Query: 98  VKIDANENPYGPPPEVREALGQL----KFPYIYPDPESRRLRAALAK------DSGLESD 147
           + +   E  + PPPEV EAL            YPDP    LR A+A+         +  +
Sbjct: 1   IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPE 60

Query: 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV 207
            I+V  GA E + L++R +L+PGD+++   PT+  YE  A + GA VV VP   +    +
Sbjct: 61  EIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLL 120

Query: 208 ELIA-DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSG- 261
           +L   +A +  K K ++L +PNNP G+++++E+L ++ E+     IL++ DEAY E    
Sbjct: 121 DLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYD 180

Query: 262 --LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY---NVSV 316
                 +  +  ++ +IVLR+FSK  GL GLR+GY   P   +    +   PY     S 
Sbjct: 181 GEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTSGPST 240

Query: 317 AAEVAACAALQNP--IYLEVKEALIKERERLFKLLKDVPFL-NPYPSYSNFILCEVTSGM 373
            ++ AA AAL +      E++E   + R+ L + LK++  L    PS   F+  ++  G 
Sbjct: 241 LSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEGD 300

Query: 374 DAKKLKDDLAKMGVMIRHYNN--KELKGYVRVSVGKPEHT-DALMECL 418
           D + L+  L + GV++R  +   +  +G+VR+S   PE   +  +E L
Sbjct: 301 DEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEELEEALERL 348

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein. Length = 350

>gnl|CDD|179950 PRK05166, PRK05166, histidinol-phosphate aminotransferase; Provisional

 Score =  211 bits (540), Expect = 7e-65
 Identities = 126/364 (34%), Positives = 201/364 (55%), Gaps = 16/364 (4%)

Query: 65  SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFP 123
           S  R+ +R L PY   L  E +  + G     I K+ +NENP GP P VR A   + +  
Sbjct: 8   SLARAEVRPLPPYNAGLTIEEVRARYG--VPRIAKLGSNENPLGPSPAVRRAFADIAELL 65

Query: 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY 183
            +YPDP+ R LR A+A  +G+ +D I++G G+++LI +I R VL PGD++V   P+F ++
Sbjct: 66  RLYPDPQGRALREAIAARTGVPADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLH 125

Query: 184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243
           E    + GA V +V    D   +++ +  AV    P+ +  ++P+NP GS +  + L ++
Sbjct: 126 EDYPTMMGARVERVTVTPDLGFDLDALCAAV-ARAPRMLMFSNPSNPVGSWLTADQLARV 184

Query: 244 LEM---PILVVLDEAYTEFS---GLESRMEWVKKHD-NLIVLRTFSKRAGLAGLRVGYG- 295
           L+      L+V+DEAY E++      S +  +K      IVLRTFSK  GLAGLRVGYG 
Sbjct: 185 LDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGL 244

Query: 296 AFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYL-EVKEALIKERERLFKLLKDVPF 354
                ++  L R + P+NV+ AA+ AA AAL +  +L +     + ERERL K L ++ +
Sbjct: 245 VSDPELVGLLDRVRTPFNVNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEMGY 304

Query: 355 LNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDAL 414
               PS +NF+  +      A  + + L + GV+++ +     + ++RVS+G PE  D  
Sbjct: 305 -RIAPSRANFLFFDA--RRPASAVAEALLRQGVIVKPWKQPGFETFIRVSIGSPEENDHF 361

Query: 415 MECL 418
           +  L
Sbjct: 362 VAAL 365

Length = 371

>gnl|CDD|179559 PRK03321, PRK03321, putative aminotransferase; Provisional

 Score =  210 bits (537), Expect = 1e-64
 Identities = 118/358 (32%), Positives = 191/358 (53%), Gaps = 27/358 (7%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYI 125
           +R  L  +  Y P           G+     +K+ +NE P+GP P VR A+ +       
Sbjct: 5   LRPDLAGIPAYVP-----------GKTVPGAIKLSSNETPFGPLPSVRAAIARAAAGVNR 53

Query: 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
           YPD  +  LRAALA+  G+  +H+ VGCG+  L   +++    PGD+++    +F  Y  
Sbjct: 54  YPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEAYPI 113

Query: 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
              V GA  V+VP   D + +++ +A A+  ++ + IF+ +PNNP G+++   +L + L+
Sbjct: 114 LVQVAGATPVQVPLTPDHTHDLDAMAAAIT-DRTRLIFVCNPNNPTGTVVTPAELARFLD 172

Query: 246 -MP--ILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
            +P  +LVVLDEAY E+   +     +E V+ H N++VLRTFSK  GLAGLRVGY     
Sbjct: 173 AVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP 232

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYL-EVKEALIKERERLFKLLKDVPFLNPY 358
            +I  L +   P++V+  A+ AA A+L     L E  +A++ ER+R+   L+   +  P 
Sbjct: 233 EVIAALRKVAVPFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAAGWTVP- 291

Query: 359 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALME 416
           PS +NF+   +  G          A+ GV++R +  +     VRV++G PE  DA + 
Sbjct: 292 PSQANFVWLPL--GERTADFAAAAAEAGVVVRPFAGEG----VRVTIGAPEENDAFLR 343

Length = 352

>gnl|CDD|235053 PRK02610, PRK02610, histidinol-phosphate aminotransferase; Provisional

 Score =  199 bits (508), Expect = 4e-60
 Identities = 118/373 (31%), Positives = 189/373 (50%), Gaps = 33/373 (8%)

Query: 65  SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPY 124
            F+RS L +LK Y P  P       + +      ++D NE PY  PP++++ L  L    
Sbjct: 3   PFLRSDLAQLKAYHPH-PSGDADDAVIQLD----RLDTNEFPYDLPPDLKQKLAWLYQQG 57

Query: 125 I----YPDPESRRLRAALAK--------DSGLESDHILVGCGADELID--LIMRCVLDPG 170
           I    YPD     L+ A+A+         S +   +I VG G+DELI   LI  C+   G
Sbjct: 58  IESNRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATCLGGEG 117

Query: 171 DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKP---KCIFLTS 226
             +V   PTF+MY   A   G  VV+V R    F +++     A+E+ +    + +F+  
Sbjct: 118 SILV-AEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVH 176

Query: 227 PNNPDGSIINDEDL--LKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR 284
           PN+P G+ +   +L  L+ L   ILVV+DEAY EFS   + +  + +H N ++LRTFSK 
Sbjct: 177 PNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQ-TTLVGELAQHPNWVILRTFSKA 235

Query: 285 AGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN-PIYLEVKEALIKERE 343
             LA  RVGY      +I  L + + PYN+   +++AA  AL++    L     +++ER+
Sbjct: 236 FRLAAHRVGYAIGHPELIAVLEKVRLPYNLPSFSQLAAQLALEHRQELLAAIPEILQERD 295

Query: 344 RLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRV 403
           RL++ L+++P L  +PS +NF+   ++       L   L   G ++RH       G +R+
Sbjct: 296 RLYQALQELPQLRVWPSAANFLYLRLSQDAALAALHQALKAQGTLVRH-----TGGGLRI 350

Query: 404 SVGKPEHTDALME 416
           ++G PE     +E
Sbjct: 351 TIGTPEENQRTLE 363

Length = 374

>gnl|CDD|235115 PRK03317, PRK03317, histidinol-phosphate aminotransferase; Provisional

 Score =  199 bits (508), Expect = 5e-60
 Identities = 119/372 (31%), Positives = 189/372 (50%), Gaps = 43/372 (11%)

Query: 67  IRSHLRKLKPY-QPILPFEVLSIQLGRKPEDI-VKIDANENPYGPPPE--------VREA 116
           +R  LR   PY  P         QL     D+ V+++ NENPY P P         V EA
Sbjct: 10  LRDDLRGKSPYGAP---------QL-----DVPVRLNTNENPYPPSPALVADIAEAVAEA 55

Query: 117 LGQLKFPYIYPDPESRRLRAALA----KDSG--LESDHILVGCGADELIDLIMRCVLDPG 170
              L     YPD ++  LRA LA      +G  L  +++    G++E++  +++    PG
Sbjct: 56  AAGLNR---YPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFGGPG 112

Query: 171 DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
              +   P+++M+   A       V+ PR +DF+L+V+    A+   +P  +FLTSPNNP
Sbjct: 113 RTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNP 172

Query: 231 DGSIINDEDLLKILE-MPILVVLDEAYTEF--SGLESRMEWVKKHDNLIVLRTFSKRAGL 287
            G+ +  +D+  IL+  P +VV+DEAY EF  SG  S +  + ++  L+V RT SK    
Sbjct: 173 TGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAF 232

Query: 288 AGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN-PIYLEVKEALIKERERLF 346
           AG R+GY A   ++++ L   + PY++S   + AA AAL++    L    AL  ER+R+ 
Sbjct: 233 AGGRLGYLAAAPAVVDALRLVRLPYHLSAVTQAAARAALRHADELLASVAALRAERDRVV 292

Query: 347 KLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG 406
             L+++      PS +NF+L    +  D   +   L   GV+IR      + G++RV++G
Sbjct: 293 AWLRELGL-RVAPSDANFVLFGRFA--DRHAVWQGLLDRGVLIRDVG---IPGWLRVTIG 346

Query: 407 KPEHTDALMECL 418
            PE  DA +  L
Sbjct: 347 TPEENDAFLAAL 358

Length = 368

>gnl|CDD|235440 PRK05387, PRK05387, histidinol-phosphate aminotransferase; Provisional

 Score =  190 bits (484), Expect = 1e-56
 Identities = 113/363 (31%), Positives = 190/363 (52%), Gaps = 39/363 (10%)

Query: 71  LRKLKPYQPILPFEVLSIQLGRKPED--IVKIDANENPYGPPPEVREAL-----GQLKFP 123
           +R+L+PY P           G +P+   ++K++ NENPY P P+V EA+       L+  
Sbjct: 9   VRQLEPYVP-----------GEQPKLAKLIKLNTNENPYPPSPKVLEAIRAALGDDLR-- 55

Query: 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY 183
            +YPDP +  LR A+A   GL+ + + VG G+DE++        +    ++    T++ Y
Sbjct: 56  -LYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFNHDRPLLFPDITYSFY 114

Query: 184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKC-IFLTSPNNPDGSIINDEDLLK 242
              A + G    ++P   DFS++VE      +  +P   I   +PN P G  +   ++ +
Sbjct: 115 PVYAGLYGIPYEEIPLDDDFSIDVE------DYLRPNGGIIFPNPNAPTGIALPLAEIER 168

Query: 243 ILEMPI--LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300
           IL      +VV+DEAY +F G ES +  + ++ NL+V++TFSK   LAGLRVG+      
Sbjct: 169 ILAANPDSVVVIDEAYVDF-GGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPE 227

Query: 301 IIEYLWRAK---QPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLN 356
           +IE L R K     Y +   A+  A AA+++  Y E  +  +I  RERL + L+ + F  
Sbjct: 228 LIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEALGF-E 286

Query: 357 PYPSYSNFILCEVT-SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALM 415
             PS +NF+         DA +L   L + G+++RH+N   +  ++R+++G  E  +AL+
Sbjct: 287 VLPSKANFVF--ARHPSHDAAELAAKLRERGIIVRHFNKPRIDQFLRITIGTDEEMEALV 344

Query: 416 ECL 418
           + L
Sbjct: 345 DAL 347

Length = 353

>gnl|CDD|234972 PRK01688, PRK01688, histidinol-phosphate aminotransferase; Provisional

 Score =  188 bits (479), Expect = 5e-56
 Identities = 115/370 (31%), Positives = 187/370 (50%), Gaps = 40/370 (10%)

Query: 64  DSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFP 123
               R ++R L PYQ        + +LG   +  V ++ANE P     +    L Q    
Sbjct: 6   TDLARENVRALTPYQS-------ARRLGGNGD--VWLNANEYPTAVEFQ----LTQQTLN 52

Query: 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTM 182
             YP+ + + +    A  +G++ + +LV  GADE I+L++R   +PG D I+ CPPT+ M
Sbjct: 53  R-YPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGM 111

Query: 183 YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242
           Y   A   G  +  VP   ++ L++  IAD ++    K +++ SPNNP G++IN +DL  
Sbjct: 112 YSVSAETIGVEIRTVPTLDNWQLDLPAIADNLD--GVKVVYVCSPNNPTGNLINPQDLRT 169

Query: 243 ILEMP---ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           +LE+     +VV DEAY EF    S   W+ ++ +L++LRT SK   LAGLR G   F L
Sbjct: 170 LLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCG---FTL 226

Query: 300 ---SIIEYLWRAKQPYNVSV-AAEVAACAALQNPIYLE-----VKEALIKERERLFKLLK 350
               +I  L +   PY +S   A++AA  AL  P  +      V E +   R+ L   LK
Sbjct: 227 ANEEVINLLLKVIAPYPLSTPVADIAA-QALS-PQGIAAMRERVAE-INANRQWLIAALK 283

Query: 351 DVPFL-NPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVGKP 408
           ++P +   + S +N+IL   T    +  +   L   G+++R  N +  L   +R+++G  
Sbjct: 284 EIPCVEQVFDSETNYILARFT---ASSAVFKSLWDQGIILRDQNKQPGLSNCLRITIGTR 340

Query: 409 EHTDALMECL 418
           E    +++ L
Sbjct: 341 EECQRVIDAL 350

Length = 351

>gnl|CDD|233289 TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phosphate decarboxylase

 Score =  182 bits (463), Expect = 7e-54
 Identities = 107/339 (31%), Positives = 161/339 (47%), Gaps = 29/339 (8%)

Query: 89  QLGRKPEDIVKIDANENPYGPP-PEVR-EALGQLKFPYIYPDPESRRLRAALAKDSGLES 146
           + G  PED + +    NP GPP P +   A  +      YPDPE   LRAA A   GL +
Sbjct: 11  RYGIPPEDWLDLSTGINPLGPPVPPIPLSAWAR------YPDPEYDELRAAAAAYYGLPA 64

Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN 206
             +L   GA E I L+ R +L PG  +V   PT++ Y       G  VV++P       +
Sbjct: 65  ASVLPVNGAQEAIYLLPR-LLAPGRVLV-LAPTYSEYARAWRAAGHEVVELP-------D 115

Query: 207 VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE----MPILVVLDEAYTEFSGL 262
           ++ +  A+E      + + +PNNP G +I  E LL +          +V+DEA+ +F+  
Sbjct: 116 LDRLPAALEEAD--LLVVCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPD 173

Query: 263 ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAA 322
            S      +   L+VLR+ +K  GLAGLR+G+     ++I  L  A  P+ V+  A  A 
Sbjct: 174 ASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALIARLREALGPWTVNGPALAAG 233

Query: 323 CAALQNPIYL-EVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDD 381
            AAL +  +    +  L  ER RL  LL  +  L      + F+L       DA  L + 
Sbjct: 234 RAALADTAWQAATRARLAAERARLAALLARLGGLRVVGGTALFLLVRTP---DAAALHEA 290

Query: 382 LAKMGVMIRHY-NNKELKG-YVRVSVGKPEHTDALMECL 418
           LA+ G++IR + N   L   Y+R ++   E  D L+E L
Sbjct: 291 LARRGILIRDFDNFPGLDPRYLRFALPTDEENDRLLEAL 329

This family contains pyridoxal phosphate-binding class II aminotransferases (see pfam00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 330

>gnl|CDD|184830 PRK14809, PRK14809, histidinol-phosphate aminotransferase; Provisional

 Score =  181 bits (462), Expect = 1e-53
 Identities = 115/353 (32%), Positives = 180/353 (50%), Gaps = 22/353 (6%)

Query: 76  PYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPE----VREALGQLKFPYIYPDPES 131
            Y+     E ++ +LG  P+D+VK+ +NENP+GP P     +REA  ++   + YP    
Sbjct: 11  AYRAGRGIEEVARELGLDPDDLVKLSSNENPHGPSPAAVEAIREAAERV---HSYPKASH 67

Query: 132 RRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNG 191
             L AALA    +  + + +  G D  +D + R +LDPGD ++   P F  Y   A  + 
Sbjct: 68  ADLTAALADRWDVSPEQVWLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSARYHH 127

Query: 192 AAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP-- 247
             V + P  +  DF    + + DA + E+   ++LTSP+NP GS I  +++  + E    
Sbjct: 128 GEVREYPVSKADDFEQTADTVLDAYDGER--IVYLTSPHNPTGSEIPLDEVEALAERTDE 185

Query: 248 -ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW 306
             LVV+DEAY EF+   S +  V++ D++ VLRTFSK  GLAGLR+GY   P    +   
Sbjct: 186 ETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADAYA 245

Query: 307 RAKQPYNVSVAAEVAACAALQNPIYLEVKEALIKE-RERLFKLLKDVPFLNPYPSYSNFI 365
           R   P+  S  A  A  AAL +  ++E      +  RE + + L D P    + S  NF+
Sbjct: 246 RVNTPFAASELACRAGLAALDDDEHVERTVETARWAREYIREEL-DAP---TWESAGNFV 301

Query: 366 LCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 418
           L EV    DA  + +   + GV++R   +  L   +R++ G  E T+  +E L
Sbjct: 302 LAEVG---DASAVAEAAQERGVIVRDCTSFGLPECIRITCGTREETERAVEVL 351

Length = 357

>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II

 Score =  176 bits (448), Expect = 2e-51
 Identities = 94/354 (26%), Positives = 159/354 (44%), Gaps = 35/354 (9%)

Query: 95  EDIVKIDANENPYG--PPPEVREALGQL-------KFPYIYPDPESRRLRAALAKDSGLE 145
            D + + +NE        P V +A            +      PE R   A     S + 
Sbjct: 1   TDKINLGSNEYLGDSGTLPAVAKAEKDALAGGTRNLYGPTDGLPELREALAKFLGRSPVL 60

Query: 146 ----SDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK 200
                  ++ G GA   I+ ++  + L+PGD I+   PT+  Y     + G  VV+ P  
Sbjct: 61  KLDREAAVVFGSGAGANIEALIFLLRLNPGDAILVPAPTYPSYIRIFRLAGGEVVRYPLY 120

Query: 201 S--DFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVL 252
           S  DF L+ + +  A++   E  K +  TSP+NP G++   E+L K+L++     IL+++
Sbjct: 121 SSNDFHLDFDALEAALKEATEGNKVVLHTSPHNPTGTVATLEELEKLLDLAKEHNILLLV 180

Query: 253 DEAYTEF----SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA 308
           DEAY  F        +    + +  NL+V+ +FSK  GLAG RVGY     ++I  L + 
Sbjct: 181 DEAYAGFVFGSLDAVATRALLAEGPNLLVVGSFSKAFGLAGWRVGYILGNAAVISQLRKL 240

Query: 309 KQPYNVSVAAEVAACAALQNP--IYLEVKE---ALIKERERLFKLLKDVPFLNPYPSYSN 363
            +P+  S   + AA AAL +P  +  E++E    + + R+ L   L+     +  PS + 
Sbjct: 241 ARPFYSSTHLQAAAAAALSDPLLVASELEEMRQRIKERRDYLRDGLEAAGL-SVLPSQAG 299

Query: 364 FILCEVTSGMDAKKLKDDLAKM-GVMIRHYNNKELKGYVRVSVGKPEHTDALME 416
           F L        A  L   L +  GV +   ++    G++R++V     T+  +E
Sbjct: 300 FFLLTGLDPEAALALAQVLLEEVGVYVTPGSSFGGPGWLRITVAG--GTEEELE 351

Length = 357

>gnl|CDD|179869 PRK04635, PRK04635, histidinol-phosphate aminotransferase; Provisional

 Score =  175 bits (446), Expect = 4e-51
 Identities = 104/356 (29%), Positives = 164/356 (46%), Gaps = 28/356 (7%)

Query: 68  RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYP 127
           R  L  L PYQ        + ++G + +  + I+ANE+P+    E +  L +L     YP
Sbjct: 13  RPELLALTPYQS-------ARRIGGRGD--IWINANESPFNN--EYKLDLARLNR---YP 58

Query: 128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFD 186
           + +   L  A +  +G+  + IL   GADE I+L++R   +PG D I    PT+ MY   
Sbjct: 59  ECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAIS 118

Query: 187 AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246
           A      V  +P  +D+ L ++ I      +  K +F+ +PNNP G++I+  D+ +++EM
Sbjct: 119 AETFNVGVKALPLTADYQLPLDYIEQL---DGAKLVFICNPNNPTGTVIDRADIEQLIEM 175

Query: 247 --PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY 304
               +VV+DEAY EF    S  + +  + NL+VLRT SK   LAG R G+      +IE 
Sbjct: 176 TPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELIEI 235

Query: 305 LWRAKQPYNVSVAAEVAACAALQ----NPIYLEVKEALIKERERLFKLLKDVPFLNPYPS 360
           L R   PY V +     A  AL       +  +V + L  +  RL   L           
Sbjct: 236 LMRVIAPYPVPLPVSEIATQALSEAGLARMKFQVLD-LNAQGARLQAALSMYGGAKVLEG 294

Query: 361 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALME 416
             N++L +     D   +   L   G++ R Y +  L   +R S      TD L+ 
Sbjct: 295 NGNYVLAKFD---DVDAVFKALWDAGIVARAYKDPRLANCIRFSFSNRAETDKLIG 347

Length = 354

>gnl|CDD|181255 PRK08153, PRK08153, histidinol-phosphate aminotransferase; Provisional

 Score =  167 bits (426), Expect = 4e-48
 Identities = 120/354 (33%), Positives = 178/354 (50%), Gaps = 29/354 (8%)

Query: 82  PF---EVLSIQLGRKPEDIVKIDANENPYGPPPEV----REALGQLKFPYIYPDPESRRL 134
           PF   E L  Q GR      +I ANE+ +GP P V    REA  ++   + Y DPE+  L
Sbjct: 18  PFVGPETLERQRGRPFR--ARIGANESGFGPSPSVIAAMREAAAEI---WKYGDPENHDL 72

Query: 135 RAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCP---PTFTMYEFDAAVNG 191
           R ALA   G+  ++I+VG G D L+ LI+R  ++PGD +V      PTF    +  A  G
Sbjct: 73  RHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDPVVTSLGAYPTFN---YHVAGFG 129

Query: 192 AAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE-MP--I 248
             +V VP + D   +++ + DA  RE    ++L +P+NP GS     D++  +E +P   
Sbjct: 130 GRLVTVPYRDDRE-DLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETT 188

Query: 249 LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA 308
           L+VLDEAY E +   +         N+I +RTFSK  GLAG RVGY       I+   + 
Sbjct: 189 LLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKV 248

Query: 309 KQPYNVSVAAEVAACAALQNPIYL-EVKEALIKERERLFKLLKDVPFLNPYPSYSNFILC 367
           +  + ++  A+ AA AAL++  YL EV   +   R+R+  + +    L P PS +NF+  
Sbjct: 249 RNHFGMNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARANG-LTPLPSATNFV-- 305

Query: 368 EVTSGMD---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 418
            +  G D   A+ + D L    + +R      L   +RVS G  E  D   E L
Sbjct: 306 AIDCGRDGAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCGPDEELDLFAEAL 359

Length = 369

>gnl|CDD|180542 PRK06358, PRK06358, threonine-phosphate decarboxylase; Provisional

 Score =  166 bits (423), Expect = 8e-48
 Identities = 98/349 (28%), Positives = 181/349 (51%), Gaps = 31/349 (8%)

Query: 89  QLGRKPEDIVKIDANENPYGPPPEVREA----LGQLKFPYIYPDPESRRLRAALAKDSGL 144
           + G     I+   AN NP G P  +++A    L +L     YPDP+   LR  +A    L
Sbjct: 13  EKGLTKNMILDFSANINPLGVPESLKQAITENLDKLVE---YPDPDYLELRKRIASFEQL 69

Query: 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVV--KVPRKSD 202
           + +++++G GA ELI  I++ V  P  K++   PTF  YE       A +   ++  +++
Sbjct: 70  DLENVILGNGATELIFNIVK-VTKP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETN 127

Query: 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAYTE 258
           F+ N  ++ +   +E+   +FL +PNNP G +I+ E++ KIL    +  I +++DEA+ +
Sbjct: 128 FAANEIVLEE--IKEEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMD 185

Query: 259 F---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG-AFPLSIIEYLWRAKQPYNV 314
           F   +   S + +++   NLI++R F+K   + GLR+GYG     ++ E L + ++P+++
Sbjct: 186 FLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMREPWSI 245

Query: 315 SVAAEVAACAALQNPIYLEVKEALI-KERERLFKLLKDVPFLNPYPSYSNFILCEVTSGM 373
           +  A++A    L +  Y++     I +E++ L+  L +   +  Y    NFI  ++    
Sbjct: 246 NTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVNFIFFKL---E 302

Query: 374 DAKKLKDDLAKMGVMIRHYNNKELKG----YVRVSVGKPEHTDALMECL 418
               L+ +L K G++IR  +N   +G    Y RV+V   E    L++ L
Sbjct: 303 KPIDLRKELLKKGILIRSCSN--YRGLDENYYRVAVKSREDNKKLLKAL 349

Length = 354

>gnl|CDD|134568 PRK01533, PRK01533, histidinol-phosphate aminotransferase; Validated

 Score =  166 bits (422), Expect = 1e-47
 Identities = 116/372 (31%), Positives = 185/372 (49%), Gaps = 45/372 (12%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDI---------VKIDANENPYGPPPEVREAL 117
           ++  L  L+PY+P           G+ PE +         VK+ +NENP+G  P V + L
Sbjct: 3   VKDQLSSLQPYKP-----------GKSPEQMKEVYGDHSFVKLASNENPFGCSPRVLDEL 51

Query: 118 GQLKFPY-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDC 176
            +    + +YPD  +  LR  +A    ++ + +L G G DE+I +I R VL  GD IV  
Sbjct: 52  QKSWLDHALYPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAVLKAGDNIVTA 111

Query: 177 PPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236
             TF  Y   A + G  V +V   +    +++ I+  V+    K +++ +PNNP G+ +N
Sbjct: 112 GATFPQYRHHAIIEGCEVKEVALNNGV-YDLDEISSVVD-NDTKIVWICNPNNPTGTYVN 169

Query: 237 DEDLLKILE---MPILVVLDEAYTEF---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGL 290
           D  L + +E      L+V+DEAY E+         +  ++KH N++VLRTFSK  GLA  
Sbjct: 170 DRKLTQFIEGISENTLIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASF 229

Query: 291 RVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE----VKEALIKERERLF 346
           RVGY      +IE L   + P+NVS  A+ AA  A  +  ++E    V    +++ E   
Sbjct: 230 RVGYAVGHEELIEKLNVVRLPFNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFC 289

Query: 347 KLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG 406
           K   ++PF   Y S +NFI   V +G    ++ +  A  G +IR + N      VR++VG
Sbjct: 290 K-ENEIPF---YQSQTNFIFLPVENG---GEIYEACAHAGFIIRPFPNG-----VRITVG 337

Query: 407 KPEHTDALMECL 418
             E  + ++  L
Sbjct: 338 TREQNEGVISVL 349

Length = 366

>gnl|CDD|235311 PRK04781, PRK04781, histidinol-phosphate aminotransferase; Provisional

 Score =  165 bits (420), Expect = 2e-47
 Identities = 114/333 (34%), Positives = 162/333 (48%), Gaps = 21/333 (6%)

Query: 98  VKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADE 157
           V ++ANE+ +  P +   +  +      YPDP+   LR+ALA   G   + +L+G G+DE
Sbjct: 34  VWLNANESAWANPADPDASTRR------YPDPQPPGLRSALAALYGCAPEQLLIGRGSDE 87

Query: 158 LIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD---FSLNVELIADA 213
            IDL++R +  PG D ++  PP F MY   A +  A +V+VP       F  +V  I  A
Sbjct: 88  AIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAA 147

Query: 214 VEREKPKCIFLTSPNNPDGSII---NDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVK 270
                 K +FL SP+NP GS I     E  L+ L+   LVV+DEAY EFS + S +  + 
Sbjct: 148 ALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLA 207

Query: 271 KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPI 330
           ++DNL VLRT SK   LA  R+G       +I  L R + PY V       A  AL  P 
Sbjct: 208 RYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAPYPVPTPCAALAEQALSAPA 267

Query: 331 YLEVKE---ALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKMG 386
                     +  ERERL   L  +P +   YPS  NF+L       DA+     L   G
Sbjct: 268 LAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD---DAEAAFQALLAAG 324

Query: 387 VMIRHYNN-KELKGYVRVSVGKPEHTDALMECL 418
           V++R       L   +R+++G PE  D ++  L
Sbjct: 325 VVVRDQRAAPRLSDALRITLGTPEQNDRVLAAL 357

Length = 364

>gnl|CDD|223513 COG0436, COG0436, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score =  162 bits (413), Expect = 6e-46
 Identities = 97/360 (26%), Positives = 160/360 (44%), Gaps = 47/360 (13%)

Query: 92  RKPEDIVKIDANENPYGPPPEVREALGQL----KFPYIYPDPESRRLRAALA----KDSG 143
           +  ED++ +   E  +  P  + EA  +        Y  P      LR A+A    +  G
Sbjct: 25  KGKEDVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHY-TPSAGIPELREAIAEKYKRRYG 83

Query: 144 LE---SDHILVGCGADELIDLIMRCVLDPGDKIVDCP-PTFTMYEFDAAVNGAAVVKVPR 199
           L+    + I+V  GA E + L    +L+PGD+++  P P +  YE    + G   V VP 
Sbjct: 84  LDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVL-IPDPGYPSYEAAVKLAGGKPVPVPL 142

Query: 200 K---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVL 252
               + F  ++E +  A+   K K I L SPNNP G++ + E+L  I+E+     I+++ 
Sbjct: 143 DEEENGFKPDLEDLEAAI-TPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIIS 201

Query: 253 DEAYTEF--------SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIE 303
           DE Y E         S LE         D  I + +FSK  G+ G R+G+   P   +I 
Sbjct: 202 DEIYEELVYDGAEHPSILELAGAR----DRTITINSFSKTYGMTGWRIGWVVGPPEELIA 257

Query: 304 YLWRAKQ--PYNVSVAAEVAACAALQNPIYLEVKEALIKE----RERLFKLLKDVPFL-- 355
            L + K          A+ AA AAL  P   EV E + +E    R+ L + L ++  L  
Sbjct: 258 ALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSV 317

Query: 356 NPYPSYSNFILCEVTSGMDAKKLKDDLAKM-GVMIRH---YNNKELKGYVRVSVGKPEHT 411
              P  + ++  ++   +D+++    L +  GV +     +     +GYVR+S+   E T
Sbjct: 318 VKPPEGAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEET 377

Length = 393

>gnl|CDD|181651 PRK09105, PRK09105, putative aminotransferase; Provisional

 Score =  149 bits (378), Expect = 4e-41
 Identities = 103/329 (31%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 94  PEDIVKIDANENPYGPPPEVREALGQL-----KFPYIYPDPESRRLRAALAKDSGLESDH 148
            E  V ++ANE P GP P  R+A  +      ++     D     LR   A   GL +DH
Sbjct: 42  AEGAVFLNANECPLGPSPAARDAAARSAALSGRYDLELED----DLRTLFAAQEGLPADH 97

Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
           ++   G+ E ++  +     P   +V   PT+      A   GA V KVP ++D + +V+
Sbjct: 98  VMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVK 157

Query: 209 --LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE-MP---ILVVLDEAYTEFSGL 262
             L AD         I++ +PNNP G++    D+  +L   P   +L+V DEAY  FS  
Sbjct: 158 AMLAADP----NAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLV-DEAYIHFSDA 212

Query: 263 ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAA 322
            S ++ V +  +LIVLRTFSK  G+AG+R+G  A    ++  L R      + V A  A 
Sbjct: 213 PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARFGHN-PLPVPAAAAG 271

Query: 323 CAALQNPIYLEVKEALIKE-RERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDD 381
            A+L++P  +  + A     RE     LK   +    PS +N  + +V     AK + D 
Sbjct: 272 LASLRDPKLVPQRRAENAAVREDTIAWLKKKGY-KCTPSQANCFMVDV--KRPAKAVADA 328

Query: 382 LAKMGVMI-RHYNNKELKGYVRVSVGKPE 409
           +AK GV I R +       +VRV+VG  E
Sbjct: 329 MAKQGVFIGRSW--PIWPNWVRVTVGSEE 355

Length = 370

>gnl|CDD|236009 PRK07392, PRK07392, threonine-phosphate decarboxylase; Validated

 Score =  137 bits (347), Expect = 8e-37
 Identities = 111/339 (32%), Positives = 163/339 (48%), Gaps = 20/339 (5%)

Query: 94  PEDIVKIDANENPYGPPPEVREALGQLKFPYI--YPDPESRRLRAALAKDSGLESDHILV 151
           P+ I+   A+ NP GPP  V  A+       +  YPDP+ R LR ALA+   L  + IL 
Sbjct: 21  PDAILDFSASINPLGPPESVIAAIQS-ALSALRHYPDPDYRELRLALAQHHQLPPEWILP 79

Query: 152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIA 211
           G GA EL+    R  L     +    P F  Y       GA V ++P   D       + 
Sbjct: 80  GNGAAELLTWAGR-ELAQLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLR 138

Query: 212 DAVER--EKPKC-IFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEF---SGLESR 265
                    P   + L +P+NP G + + E +L +LE   LVV+DEA+ +F      +S 
Sbjct: 139 LQTLPPQLTPNDGLLLNNPHNPTGKLWSREAILPLLEQFALVVVDEAFMDFLPPDAEQSL 198

Query: 266 MEWVKKHDNLIVLRTFSKRAGLAGLRVGYG-AFPLSIIEY-LWRAKQPYNVSVAAEVAAC 323
           +  + ++ NLI+LR+ +K   L GLR+GY  A P  +  +  WR   P+ V+  A  AA 
Sbjct: 199 IPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWR--DPWPVNGLAAAAAI 256

Query: 324 AALQNPIYLEVKEA-LIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDL 382
           AAL +  + +   A L   RE LF+ L  +P L P PS +NF+L  V S   A +L++ L
Sbjct: 257 AALADRDFQQQTWAWLPPAREALFQGLASLPGLTPLPSAANFLL--VQSQGSALQLQEKL 314

Query: 383 AKM-GVMIRH-YNNKEL-KGYVRVSVGKPEHTDALMECL 418
            +   ++IR   +  EL   Y RV+V        L+E L
Sbjct: 315 LQQHRILIRDCLSFPELGDRYFRVAVRTEAENQRLLEAL 353

Length = 360

>gnl|CDD|173269 PRK14808, PRK14808, histidinol-phosphate aminotransferase; Provisional

 Score =  129 bits (325), Expect = 5e-34
 Identities = 99/331 (29%), Positives = 168/331 (50%), Gaps = 27/331 (8%)

Query: 96  DIVKIDANENPYGPPPEVREAL------GQLKFPYIYPDPE-SRRLRAALAKDSGLESDH 148
           D   +  NENP+  P ++ + +        L+  Y  PD E   ++ + L  D  L  ++
Sbjct: 20  DRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYDSPDEELIEKILSYLDTDF-LSKNN 78

Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
           + VG GADE+I ++M       D+ V  PPT++ Y   A   GA  ++VP   D  +   
Sbjct: 79  VSVGNGADEIIYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRI--- 131

Query: 209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEW 268
                V   +   +F+ +PNNP G +   E++ +IL+    V LDEAY EF G ES ++ 
Sbjct: 132 ---PEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHG-ESYVDL 187

Query: 269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN 328
           +KK++NL V+RTFSK   LA  R+GY       I+   R + P+NVS  +++ A  AL +
Sbjct: 188 LKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVRLPFNVSYVSQMFAKVALDH 247

Query: 329 -PIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGV 387
             I+ E  + +++ERER+   L+++ +     S  NF+        + ++L + L    +
Sbjct: 248 REIFEERTKFIVEERERMKSALREMGY-RITDSRGNFVFI-FMEKEEKERLLEHLRAKNI 305

Query: 388 MIRHYNNKELKGYVRVSVGKPEHTDALMECL 418
            +R +        VR+++GK E  D +++ L
Sbjct: 306 AVRSFREG-----VRITIGKREENDMILKEL 331

Length = 335

>gnl|CDD|235749 PRK06225, PRK06225, aspartate aminotransferase; Provisional

 Score =  118 bits (298), Expect = 8e-30
 Identities = 102/351 (29%), Positives = 168/351 (47%), Gaps = 50/351 (14%)

Query: 93  KPEDIVKIDANENPYGPPPEVREAL--GQLKFPY-IYPDPES-RRLRAALAKDSGLESDH 148
           K ++++ +  N N  GP  EVREA+     +  Y  YP PE    LR  + KD GL+ D 
Sbjct: 26  KDKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLGLDDDE 85

Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSL 205
            L+  GA E + L+MR  L PGD  V   P + + +  A+  GA V++VP  S   ++ L
Sbjct: 86  ALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKL 145

Query: 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSG 261
             EL+ + ++ E  + I+L  P NP GS   +E++ +  E+       ++ D  Y +F+ 
Sbjct: 146 TPELVKENMD-ENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFA- 203

Query: 262 LESRMEWVKKH--------DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK-QPY 312
                   ++H        ++ +   +FSK  G+AGLR+G       +IE +        
Sbjct: 204 --------REHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKSIVINDL 255

Query: 313 NVSVAAEVAACAALQNPIYLEVKEALIKE-RERLF---KLLKDVP------FLNPYPSYS 362
             +V A+ AA A L+      VK+  I   R   F   KL+K+        FL  YPS+ 
Sbjct: 256 GTNVIAQEAAIAGLK------VKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHG 309

Query: 363 NFILCEVT-SGMDAKKLKDDLAKMGVMIRH--YNNKEL-KGYVRVSVGKPE 409
           N ++ +++ +G+D + L + L +  + +R   Y +K     Y+RVS   P 
Sbjct: 310 NMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFSIPR 360

Length = 380

>gnl|CDD|181212 PRK08056, PRK08056, threonine-phosphate decarboxylase; Provisional

 Score =  110 bits (278), Expect = 3e-27
 Identities = 92/351 (26%), Positives = 158/351 (45%), Gaps = 28/351 (7%)

Query: 89  QLGRKPEDIVKIDANENPYGPPPEVREAL-GQLKFPYIYPDPESRRLRAALAKDSGLESD 147
            LG  P+ ++   AN NP G P  ++ A+   L     YPD E R L  ALA+   + + 
Sbjct: 14  VLGISPDQLLDFSANINPLGMPVSLKRAIIDNLDCAERYPDVEYRHLHQALARHHQVPAS 73

Query: 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD--FSL 205
            IL G G  E I  ++   L P   ++   P F  Y       G  + +   +    + L
Sbjct: 74  WILAGNGETESIFAVVS-GLKPRRAMI-VTPGFAEYRRALQQVGCEIRRYSLREADGWQL 131

Query: 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL-----EMPILVVLDEAYTEFS 260
             + I +A+  +   C+FL +PNNP G ++ +  LL+ +      + I ++LDEA+ +F 
Sbjct: 132 T-DAILEALTPD-LDCLFLCTPNNPTG-LLPERQLLQAIAERCKSLNIALILDEAFIDFI 188

Query: 261 GLESRM-EWVKKHDNLIVLRTFSKRAGLAGLRVGY-GAFPLSIIEYLWRAKQPYNVSVAA 318
             E+     +  + +L VLR+ +K   + GLR+GY      + +  + R + P++++  A
Sbjct: 189 PDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQMPWSINAFA 248

Query: 319 EVAACAALQNPIYLEVKEA-LIKERERLFKLLKDVPFLNPYPSYSNFIL--CEVTSGMDA 375
            +A    LQ+  Y +     L +E  R ++ L  +P L  +P  +N++   CE    +D 
Sbjct: 249 ALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVWPGRANYLFLRCE-RPDID- 306

Query: 376 KKLKDDLAKMGVMIRHYNNKE-LKG-YVRVSVGKPEH----TDALMECLMH 420
             L+  L    ++IR   N   L   Y RV++           AL   L  
Sbjct: 307 --LQRALLTQRILIRSCANYPGLDSRYYRVAIRSAAENERLLAALRNVLTG 355

Length = 356

>gnl|CDD|169399 PRK08354, PRK08354, putative aminotransferase; Provisional

 Score =  100 bits (251), Expect = 9e-24
 Identities = 91/344 (26%), Positives = 147/344 (42%), Gaps = 49/344 (14%)

Query: 91  GRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHIL 150
           G + E ++   A+ NPY PP  + E   + K            L    +K  G   + I+
Sbjct: 4   GIREEGLIDFSASVNPY-PPEWLDEMFERAK-EISGRYTYYEWLEEEFSKLFG---EPIV 58

Query: 151 VGCGADELIDLIMRCVLDPGDKIVDCP-PTFTMYEFDAAVNGAAVVKVPRKSDFSLNVEL 209
           +  G  E + LI    L   D+ V  P  T+  YE  A    A ++K    +D     EL
Sbjct: 59  ITAGITEALYLIGILALR--DRKVIIPRHTYGEYERVARFFAARIIK--GPNDPEKLEEL 114

Query: 210 IADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPI----LVVLDEAYTEFSGLESR 265
           +      E+   +F  +PNNPDG   N ++L  +L+       L++LDEA+ +F      
Sbjct: 115 V------ERNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDF------ 162

Query: 266 MEWVKKHD-----NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEV 320
              VKK +     N+I LRTF+K  GL G+RVGY        E     + P+++      
Sbjct: 163 ---VKKPESPEGENIIKLRTFTKSYGLPGIRVGY---VKGFEEAFRSVRMPWSIGSTGYA 216

Query: 321 AACAALQNPIY--LEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL 378
                +++      +    + +E+ER  K L          S +NF + +V    DA+K 
Sbjct: 217 FLEFLIEDDFEHLRKTMPLIWREKERFEKALY-------VKSDANFFIKDVG---DAEKF 266

Query: 379 KDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY 422
            + L + G+++R   +  L GY+R SV   E  + L+  L    
Sbjct: 267 VEFLKRNGILVRDCTSFGLPGYIRFSVRDREENEKLIRALREWR 310

Length = 311

>gnl|CDD|180720 PRK06836, PRK06836, aspartate aminotransferase; Provisional

 Score = 98.3 bits (246), Expect = 1e-22
 Identities = 69/226 (30%), Positives = 114/226 (50%), Gaps = 40/226 (17%)

Query: 105 NPYGPPPE-VREALGQL-------KFPYI----YPDPESRRLRAALAK------DSGLES 146
           NP  PPP  V+EAL +L          Y+    YP+     +R A+A+       + L +
Sbjct: 42  NPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPE-----VREAIAESLNRRFGTPLTA 96

Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSL 205
           DHI++ CGA   +++ ++ +L+PGD+++   P F  Y F    +G  +V VP     F  
Sbjct: 97  DHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQP 156

Query: 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----------PILVVLDEA 255
           +++ +  A+   K K + + SPNNP G + ++E L  +  +          PI ++ DE 
Sbjct: 157 DLDALEAAIT-PKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEP 215

Query: 256 YTE--FSGLESRMEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFP 298
           Y E  + G E  + ++ K+ DN IV+ +FSK   L G R+GY A  
Sbjct: 216 YREIVYDGAE--VPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVN 259

Length = 394

>gnl|CDD|236075 PRK07683, PRK07683, aminotransferase A; Validated

 Score = 94.8 bits (236), Expect = 2e-21
 Identities = 74/278 (26%), Positives = 128/278 (46%), Gaps = 29/278 (10%)

Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKV-PRKSDFSLNV 207
           I+V  GA E ID+  R +L+PG +++   P +  YE    + GA  V +  R + F L  
Sbjct: 92  IIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTA 151

Query: 208 ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEF---S 260
           E + +A+  EK +C+ L  P+NP G  ++ E+L  I ++     I V+ DE Y+E     
Sbjct: 152 EALENAIT-EKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQ 210

Query: 261 GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEV 320
              S   + +  +  IV+   SK   + G R+G+   P  + +++ +  Q YNV+ A+ +
Sbjct: 211 PHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKHILKVHQ-YNVTCASSI 269

Query: 321 ---AACAALQNPI--YLEVKEALIKERERLFKLLK--DVPFLNP------YPSYSNFILC 367
              AA  AL         ++    K R+ ++  L    +    P      +PS  +F + 
Sbjct: 270 SQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISMGLDVEKPTGAFYLFPSIGHFTMS 329

Query: 368 EVTSGMDAKKLKDDLAKM-GVMIRHYNNKELKGYVRVS 404
                +D  + +  LA + G     Y     +GYVR+S
Sbjct: 330 SFDFALDLVE-EAGLAVVPGSAFSEYG----EGYVRLS 362

Length = 387

>gnl|CDD|224089 COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

 Score = 93.2 bits (232), Expect = 1e-20
 Identities = 89/338 (26%), Positives = 152/338 (44%), Gaps = 60/338 (17%)

Query: 106 PYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162
            YGP    PE+REA+             +  L A        E + I++  GA + +DL+
Sbjct: 127 QYGPTAGLPELREAI-------------AAYLLARRG--ISCEPEQIVITSGAQQALDLL 171

Query: 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVN-----GAAVVKVPRKSDFSLNVELIADAVERE 217
           +R +LDPGD ++   PT     +  A+      GA V+ VP   +  ++ E + +A+ + 
Sbjct: 172 LRLLLDPGDTVLVEDPT-----YPGALQALEALGARVIPVPV-DEDGIDPEALEEALAQW 225

Query: 218 KPKCIFLTSPN--NPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKK 271
           KPK +++T P   NP G  ++ E    +L +     +L++ D+ Y E          +K 
Sbjct: 226 KPKAVYVT-PTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKA 284

Query: 272 HD---NLIVLRTFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAA 325
            D    +I L +FSK   LA GLR+GY   P  +IE L R KQ      S  ++ A  A 
Sbjct: 285 LDAPGRVIYLGSFSK--TLAPGLRLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAF 342

Query: 326 LQNPIYLEVKEALIKE----RERLFKLLKDVPFLNPYPSYSN-----FILCEVTSGMDAK 376
           L +  Y      L +E    R+ L + L +  +L    +++      F+  E+  G+DA+
Sbjct: 343 LLSGHYDRHLRRLRREYARRRDALLEALAE--YLPELATWTRPEGGLFLWLELPEGIDAR 400

Query: 377 KLKDDLAKMGVMIR-----HYNNKELKGYVRVSVGKPE 409
           +L     + GV++         + + +  +R+S   P 
Sbjct: 401 ELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSPS 438

Length = 459

>gnl|CDD|235596 PRK05764, PRK05764, aspartate aminotransferase; Provisional

 Score = 91.0 bits (227), Expect = 4e-20
 Identities = 79/293 (26%), Positives = 128/293 (43%), Gaps = 59/293 (20%)

Query: 94  PEDIVK-----IDANENPYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE 145
           PE I +     +D  +  Y P    PE+REA+                  A L +D+GL+
Sbjct: 46  PEHIKEAAIEALDDGKTKYTPAAGIPELREAI-----------------AAKLKRDNGLD 88

Query: 146 --SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD- 202
                ++V  GA + +      +LDPGD+++   P +  Y     + G   V VP   + 
Sbjct: 89  YDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEEN 148

Query: 203 -FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAY- 256
            F L VE +  A+   K K + L SP+NP G++ + E+L  I    +E  I V+ DE Y 
Sbjct: 149 GFKLTVEQLEAAIT-PKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYE 207

Query: 257 ------TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR-AK 309
                  EF+ + S +   +  D  I +  FSK   + G R+GY A P  +I+ + +   
Sbjct: 208 KLVYDGAEFTSIAS-LSP-ELRDRTITVNGFSKAYAMTGWRLGYAAGPKELIKAMSKLQS 265

Query: 310 QPY-NVSVAAEVAACAALQNPIYLEVKEALIKE--------RERLFKLLKDVP 353
               N +  A+ AA AAL  P      +  ++E        R+ +   L ++P
Sbjct: 266 HSTSNPTSIAQYAAVAALNGP------QDEVEEMRQAFEERRDLMVDGLNEIP 312

Length = 393

>gnl|CDD|181082 PRK07682, PRK07682, hypothetical protein; Validated

 Score = 89.0 bits (221), Expect = 2e-19
 Identities = 59/198 (29%), Positives = 103/198 (52%), Gaps = 22/198 (11%)

Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP----RKSD 202
           D I+V  GA + +D+ MR +++PGD+++   P+F  Y     V  A  V VP     +++
Sbjct: 82  DEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYA--PLVTLAGGVPVPVATTLENE 139

Query: 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE 258
           F +    I +A    K K I L SPNNP G+++N  +L +I  +     ++V+ DE Y E
Sbjct: 140 FKVQPAQI-EAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAE 198

Query: 259 FSGLE-----SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
            +  E     + ++ +++    I++  FSK   + G R+G+ A P+   E + +  Q Y+
Sbjct: 199 LTYDEAYTSFASIKGMRERT--ILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKIHQ-YS 255

Query: 314 VSVA---AEVAACAALQN 328
           +  A   A+ AA  AL+ 
Sbjct: 256 MMCAPTMAQFAALEALRA 273

Length = 378

>gnl|CDD|235985 PRK07309, PRK07309, aromatic amino acid aminotransferase; Validated

 Score = 84.4 bits (209), Expect = 8e-18
 Identities = 90/336 (26%), Positives = 149/336 (44%), Gaps = 55/336 (16%)

Query: 100 IDANENPYGPP---PEVREALGQL---KFPYIYPDPESRRLRAALAKDSGLESDHILVGC 153
           IDAN++ Y       E+R+A       K+   Y  PE                + ILV  
Sbjct: 56  IDANQSHYTGMAGLLELRQAAADFVKEKYNLDY-APE----------------NEILVTI 98

Query: 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKV-PRKSDFSLNVELIAD 212
           GA E +   +  +L+PGDK++   P +  YE    + GA +V++   ++DF L  E++  
Sbjct: 99  GATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEK 158

Query: 213 AV--EREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE--- 263
           A+  + +K K + L  P NP G   + E +  + ++     I V+ DE Y+E +      
Sbjct: 159 AILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPH 218

Query: 264 -SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVA---AE 319
            S  E++   D  I++   SK   + G R+G    P      L ++ Q Y V+ A   A+
Sbjct: 219 VSIAEYLP--DQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKSHQ-YLVTAATTMAQ 275

Query: 320 VAACAALQNPI--YLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG--MDA 375
            AA  AL N     L +K+  IK R+ + + + D+ F    P  + +I  ++ +G   D+
Sbjct: 276 FAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDLGFKIIKPDGAFYIFAKIPAGYNQDS 335

Query: 376 KKLKDDLAKM-------GVMIRHYNNKELKGYVRVS 404
            K   D A+        G     Y     +GYVR+S
Sbjct: 336 FKFLQDFARKKAVAFIPGAAFGPYG----EGYVRLS 367

Length = 391

>gnl|CDD|180404 PRK06108, PRK06108, aspartate aminotransferase; Provisional

 Score = 80.4 bits (199), Expect = 2e-16
 Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 25/243 (10%)

Query: 134 LRAALAKDSG------LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA 187
           LR ALA+            + I V     + + L  + ++ PGD++V   P +       
Sbjct: 66  LREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAP 125

Query: 188 AVNGAAVVKVP---RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244
            + GA VV VP       ++L+++ +  A+   + + +F+ SPNNP G   + +DL  IL
Sbjct: 126 KILGARVVCVPLDFGGGGWTLDLDRLLAAIT-PRTRALFINSPNNPTGWTASRDDLRAIL 184

Query: 245 EMP----ILVVLDEAYTEFS-GLESR----MEWVKKHDNLIVLRTFSKRAGLAGLRVGYG 295
                  + +V DE Y         R    ++  +  D +I + +FSK   + G R+G+ 
Sbjct: 185 AHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWL 244

Query: 296 AFPLSIIEYLWRAKQPYNVSVAAEV---AACAALQN--PIYLEVKEALIKERERLFKLLK 350
             P ++ + L +  + YN S  A+    AA AAL        E+   L + R+ L   L+
Sbjct: 245 VAPPALGQVLEKLIE-YNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALR 303

Query: 351 DVP 353
            +P
Sbjct: 304 ALP 306

Length = 382

>gnl|CDD|236248 PRK08361, PRK08361, aspartate aminotransferase; Provisional

 Score = 80.3 bits (198), Expect = 2e-16
 Identities = 78/341 (22%), Positives = 164/341 (48%), Gaps = 29/341 (8%)

Query: 92  RKPEDIVKIDANENPYGPPPEVREALGQL---KFPYIYPDPESRRLRAALAK------DS 142
            K E+++ +   E  +  P  ++EA  +     + +  P+     LR A+A+        
Sbjct: 30  SKMENVISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGV 89

Query: 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-- 200
            ++ D+++V  GA E   L    +L+ GD+++   P F  Y  DA +  A  +++P +  
Sbjct: 90  DVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREE 149

Query: 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAY 256
           ++F  + + + + + + + + I +  PNNP G+ ++ E    I ++     I ++ DE Y
Sbjct: 150 NEFQPDPDELLELITK-RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPY 208

Query: 257 TEFSGLESRMEWVKKH--DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQPY 312
             F    ++   + K+  DN I+  +FSK   + G R+G+   P  +I+ + +  A    
Sbjct: 209 EHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDMIKLHAYIIG 268

Query: 313 NVSVAAEVAACAALQNPIYLEVKEALIKE----RERLFKLLKDVPFLNPY-PSYSNFILC 367
           NV+   ++A   AL++    +  E + KE    R+ + K LK++P +  + P  + ++  
Sbjct: 269 NVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFA 328

Query: 368 EVT-SGMDAKKLKDDL---AKMGVMIRHYNNKELKGYVRVS 404
            +  +GM ++   + L   A++ V+      K  +GY+R+S
Sbjct: 329 NIDETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRIS 369

Length = 391

>gnl|CDD|235654 PRK05957, PRK05957, aspartate aminotransferase; Provisional

 Score = 77.4 bits (191), Expect = 1e-15
 Identities = 86/343 (25%), Positives = 146/343 (42%), Gaps = 59/343 (17%)

Query: 107 YGPPPEVREALGQLKFPYIYPDPESRRLRAA-------------LAKDSGLE---SDHIL 150
           Y PPPE  EAL          +PE+ + +A              L +D+G+E      I+
Sbjct: 39  YPPPPEAIEALNNF-----LANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIV 93

Query: 151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELI 210
           V  G++      +  + DPGD+I+   P +  +E    + G   + VP   ++ L  E I
Sbjct: 94  VTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAI 153

Query: 211 ADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTEFS--GLE- 263
             A+   K + I   SPNNP G +  +  L  +     E  I  + DEAY  F+  G++ 
Sbjct: 154 EQAIT-PKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKH 212

Query: 264 -SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-----PYNVSVA 317
            S        ++ I L + SK  G A  R+GY   P+ ++E + + +      P  VS  
Sbjct: 213 FSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLEAIKKIQDTILICPPVVS-- 270

Query: 318 AEVAACAALQ-NPIYLEVK-EALIKERERLFKLL---KDVPFLNPYPSYSNFILCEVTSG 372
            + AA  ALQ    Y +     + + R+ L K L   +D   L+P  + + +   +V + 
Sbjct: 271 -QYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHP-ANGAFYCFLKVNTD 328

Query: 373 MDAKKLKDDLAKMGVMIRHYNNKELKG---------YVRVSVG 406
           ++  +L      +  +IR Y    + G         Y+R++ G
Sbjct: 329 LNDFEL------VKQLIREYRVAVIPGTTFGMKNGCYLRIAYG 365

Length = 389

>gnl|CDD|215089 PLN00175, PLN00175, aminotransferase family protein; Provisional

 Score = 76.8 bits (189), Expect = 3e-15
 Identities = 77/312 (24%), Positives = 140/312 (44%), Gaps = 42/312 (13%)

Query: 134 LRAALA----KDSGLESD---HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           L +A+A    KD+GL  D    + V  G  E I   +  +++PGD+++   P +  YE  
Sbjct: 96  LNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT 155

Query: 187 AAVNGAAVVKVP-RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI-- 243
            ++ GA +  V  R  DF++  + +  A    K + I + +P+NP G +   E+L  I  
Sbjct: 156 LSMAGAKIKTVTLRPPDFAVPEDELKAAFTS-KTRAILINTPHNPTGKMFTREELELIAS 214

Query: 244 --LEMPILVVLDEAYTE--FSGLESRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
              E  +L   DE Y +  F G    M  +   ++  + + +  K   L G ++G+   P
Sbjct: 215 LCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP 274

Query: 299 LSIIEYLWRAKQPYN-----VSVAAEVAACAALQNP--IYLEVKEALIKERERLFKLLKD 351
             +    W  +Q ++      +   + AA AAL+ P   Y E+K     +++ L + LK+
Sbjct: 275 PHLT---WGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKE 331

Query: 352 VPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-------KMGVM-----IRHYNNKELKG 399
           V F     S + F++ + T        ++D+A       ++GV      + + N ++ K 
Sbjct: 332 VGFKVYPSSGTYFVMVDHT----PFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKN 387

Query: 400 YVRVSVGKPEHT 411
            VR +  K E T
Sbjct: 388 LVRFAFCKDEET 399

Length = 413

>gnl|CDD|180537 PRK06348, PRK06348, aspartate aminotransferase; Provisional

 Score = 74.8 bits (184), Expect = 1e-14
 Identities = 71/280 (25%), Positives = 130/280 (46%), Gaps = 29/280 (10%)

Query: 128 DPESRR-LRAALAKDSGL--ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE 184
           D E    +    +K+  L  + + I+   GA   + L ++ +LDPGD+++   P FT Y+
Sbjct: 68  DVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYK 127

Query: 185 FDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242
               + G   + +    +  F +NV+ +   +   K K I L SPNNP G++ + E L +
Sbjct: 128 DQIEMVGGKPIILETYEEDGFQINVKKLEALIT-SKTKAIILNSPNNPTGAVFSKETLEE 186

Query: 243 ILEMPI----LVVLDEAYTEFSGLE-----SRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
           I ++ I     ++ DE Y  FS  E     + +  +   +  I   +FSK   + G R+G
Sbjct: 187 IAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMP--ERTITFGSFSKDFAMTGWRIG 244

Query: 294 YGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEVKEALIKE-RERLF---K 347
           Y   P  IIE      +   ++    ++ AA  AL++     +   + +E ++RL    K
Sbjct: 245 YVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKH--RDTIVPLIKEEFQKRLEYAYK 302

Query: 348 LLKDVPFLNPYP---SYSNFILCEVTSGMDAKKLKDDLAK 384
            ++ +P L+ +P   S   FI  + T G+ + +  + L K
Sbjct: 303 RIESIPNLSLHPPKGSIYAFINIKKT-GLSSVEFCEKLLK 341

Length = 384

>gnl|CDD|181036 PRK07568, PRK07568, aspartate aminotransferase; Provisional

 Score = 74.1 bits (183), Expect = 2e-14
 Identities = 69/249 (27%), Positives = 107/249 (42%), Gaps = 39/249 (15%)

Query: 134 LRAALAK-----DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA 188
           LR A AK        +E D IL+  G  E I   M  + DPGD+I+   P +  Y   A 
Sbjct: 71  LREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFAT 130

Query: 189 VNGAAVVKVPRKSD--FSL-NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
             G  +V V  K +  F L + E I   +   K K I +++P NP G +   E+L  + E
Sbjct: 131 SAGVKIVPVTTKIEEGFHLPSKEEIEKLIT-PKTKAILISNPGNPTGVVYTKEELEMLAE 189

Query: 246 MP----ILVVLDEAYTEF--SGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297
           +     + ++ DE Y EF   GL+  S +      D +I++ + SKR    G R+G    
Sbjct: 190 IAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIG---- 245

Query: 298 PLSIIEYLWRAKQPYN-----------VSVAAEVAACAALQNP--IYLEVKEALIKERER 344
              +I    + K+                   ++ A A L  P   + EV+E   K R+ 
Sbjct: 246 --CLIS---KNKELIAAAMKLCQARLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDI 300

Query: 345 LFKLLKDVP 353
           L++ L  +P
Sbjct: 301 LYEELNKIP 309

Length = 397

>gnl|CDD|132578 TIGR03539, DapC_actino, succinyldiaminopimelate transaminase

 Score = 70.1 bits (172), Expect = 3e-13
 Identities = 66/244 (27%), Positives = 99/244 (40%), Gaps = 45/244 (18%)

Query: 110 PPEVREALGQLK----FPYIYPDPESRRLRAALA-------KDSGLESDHILVGCGADEL 158
           PP +R AL        +P  +  PE   LR A+           GL+   +L   G  EL
Sbjct: 36  PPLIRAALAAAADAPGYPQTWGTPE---LREAIVDWLERRRGVPGLDPTAVLPVIGTKEL 92

Query: 159 IDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE 217
           +  +   + L PGD +V     +  YE  A + GA  V                  ++  
Sbjct: 93  VAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAADD-----------PTELDPV 141

Query: 218 KPKCIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAYTEFSGLESRMEWV---- 269
            P  I+L SP NP G +++ ++L  I+    E   +V  DE Y E  G E R   +    
Sbjct: 142 GPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLEL-GWEGRPVSILDPR 200

Query: 270 ---KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ------PYNVSVAAEV 320
                H  L+ + + SKR+ LAG R G+ A   +++  L   ++      P  V  AA V
Sbjct: 201 VCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDPALVAELLTVRKHAGLMVPAPV-QAAMV 259

Query: 321 AACA 324
           AA  
Sbjct: 260 AALG 263

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 357

>gnl|CDD|234249 TIGR03538, DapC_gpp, succinyldiaminopimelate transaminase

 Score = 69.7 bits (171), Expect = 5e-13
 Identities = 77/314 (24%), Positives = 138/314 (43%), Gaps = 44/314 (14%)

Query: 71  LRKLKPYQPILPFEVLSIQL-GRKP---EDIVKIDANENPYGPPPEV-----REALGQL- 120
           L +L+PY    PFE L+  L G  P   +  + +   E P  P P       RE L  L 
Sbjct: 4   LSRLQPY----PFEKLAALLAGVTPPASKPPIALSIGE-PKHPTPAFVLEALRENLHGLS 58

Query: 121 KFPYIYPDPESRRLRAALAK-----DSGLESD-HILVGCGADELIDLIMRCVLDPGDK-I 173
            +P     PE R+  A   +      +G++ + H+L   G  E +    + V++PG   +
Sbjct: 59  TYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPL 118

Query: 174 VDCP-PTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE---KPKCIFLTSPNN 229
           V  P P + +YE  A + GA    +   ++     +   DAV      + + +F+ SP N
Sbjct: 119 VVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDF--DAVPESVWRRCQLLFVCSPGN 176

Query: 230 PDGSIINDEDLLKILEMP----ILVVLDEAYTEF--------SGLESRMEWVKKHD--NL 275
           P G++++ + L K++E+      ++  DE Y+E         +GL      + + D    
Sbjct: 177 PTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRC 236

Query: 276 IVLRTFSKRAGLAGLRVGYGAFPLSIIE--YLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
           +V  + SKR+ L GLR G+ A    I++    +R      + +  ++A+ AA  +  ++ 
Sbjct: 237 LVFHSLSKRSNLPGLRSGFVAGDAEILKAFLRYRTYHGCAMPIPTQLASIAAWNDEQHVR 296

Query: 334 VKEALIKERERLFK 347
              AL +E+     
Sbjct: 297 ENRALYREKFAAVL 310

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 393

>gnl|CDD|181081 PRK07681, PRK07681, aspartate aminotransferase; Provisional

 Score = 69.1 bits (169), Expect = 8e-13
 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 21/272 (7%)

Query: 156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADA 213
           D L+ L M    +PGD I+   P +T YE    + GA    +P K  +DF  ++ELI + 
Sbjct: 104 DGLVHLPM-VYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEE 162

Query: 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKIL-----EMPILVVLDEAYTE--FSGLE--S 264
           +  +K K + L  P NP  ++   ED  K +     +  I+VV D AY E  F G +  S
Sbjct: 163 I-ADKAKMMILNFPGNPVPAMA-HEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPIS 220

Query: 265 RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAA 322
            +      +  + + + SK   LAG R+GY      I+  L + K    Y V +  + AA
Sbjct: 221 FLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAA 280

Query: 323 CAALQN-PIYLEVKEALIKE-RERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL-K 379
           CAAL+N   + E    + +E R+ L    +   +    P+ S F+  E+  G  +     
Sbjct: 281 CAALRNGAAFCEKNRGIYQERRDTLVDGFRTFGWNVDKPAGSMFVWAEIPKGWTSLSFAY 340

Query: 380 DDLAKMGVMIR--HYNNKELKGYVRVSVGKPE 409
             + +  V++   H      +G+VR+++ + E
Sbjct: 341 ALMDRANVVVTPGHAFGPHGEGFVRIALVQDE 372

Length = 399

>gnl|CDD|234250 TIGR03540, DapC_direct, LL-diaminopimelate aminotransferase

 Score = 68.2 bits (167), Expect = 2e-12
 Identities = 69/276 (25%), Positives = 124/276 (44%), Gaps = 24/276 (8%)

Query: 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIA 211
           G+ E I  I    ++PGD ++   P + +Y       G    ++P K  + F  + + I 
Sbjct: 99  GSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIP 158

Query: 212 DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE--FSGLE-- 263
           + + + K K +F+  PNNP G++   +   +++E      I+V  D AY+E  F G +  
Sbjct: 159 EDIAK-KAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAP 217

Query: 264 SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSV--AAEVA 321
           S +E     D  I   + SK   + G R+G       +I  L + K   +  V  A + A
Sbjct: 218 SFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYA 277

Query: 322 ACAALQNP--IYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMD----A 375
           A AAL  P  +  E+++   + R+ L + LK +      P  + ++   V  G      A
Sbjct: 278 AIAALNGPQDVVKEIRKIYQRRRDLLLEALKKIGIDVEKPKATFYVWVPVPEGYTSAEFA 337

Query: 376 KKLKDDLAKMGVMIRHYN--NKELKGYVRVSVGKPE 409
            +L   L + GV++       +  +GY+R+S+  P+
Sbjct: 338 ARL---LEETGVVVTPGVGFGEYGEGYIRISLTVPD 370

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia and the clade containing the Chlamydia gene is a neighboring one in the same pfam00155 superfamily so it seems quite reasonable that these enzymes catalyze the same transformation. Length = 383

>gnl|CDD|236128 PRK07908, PRK07908, hypothetical protein; Provisional

 Score = 67.7 bits (166), Expect = 2e-12
 Identities = 91/346 (26%), Positives = 139/346 (40%), Gaps = 68/346 (19%)

Query: 108 GPPPEVRE----ALGQLKFPYIYPDPE-SRRLRAALAKDSGLESDHILVGCGADELIDLI 162
            PP  +RE     LG L     YP  E  RR RAA+A   G   D +L+  GA E   L+
Sbjct: 35  TPPEWLRERLAARLGDLA---AYPSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALL 91

Query: 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGA--AVVKVPRKSDFSLNVELI---ADAVERE 217
            R  L P    V   P+FT  E +AA+  A   V +V     F L+   +   AD V   
Sbjct: 92  AR--LRPRRAAV-VHPSFT--EPEAALRAAGIPVHRVVLDPPFRLDPAAVPDDADLV--- 143

Query: 218 KPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWV-------- 269
                 + +P NP   +   E LL +     ++V+DEA+          + V        
Sbjct: 144 -----VIGNPTNPTSVLHPAEQLLALRRPGRILVVDEAF---------ADAVPGEPESLA 189

Query: 270 -KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN 328
                 ++VLR+ +K   LAGLRVGY      ++  L R +  + V     + A AA   
Sbjct: 190 GDDLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAHWPVGTLQ-LEAIAACCA 248

Query: 329 PIYL----EVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK 384
           P  +         L  +R  +   L+ V      P+ + F+L  V    DA+ L+  L +
Sbjct: 249 PRAVAEAAADAARLAADRAEMVAGLRAVGARVVDPAAAPFVLVRVP---DAELLRKRLRE 305

Query: 385 MGVMIRHYNNKELKG---------YVRVSVGKPEHTDALMECLMHL 421
            G+ +R       +G         Y+R++V        L++ L  +
Sbjct: 306 RGIAVR-------RGDTFPGLDPDYLRLAVRPRAEVPVLVQALAEI 344

Length = 349

>gnl|CDD|236095 PRK07777, PRK07777, aminotransferase; Validated

 Score = 67.8 bits (166), Expect = 2e-12
 Identities = 81/295 (27%), Positives = 130/295 (44%), Gaps = 51/295 (17%)

Query: 110 PPEVREAL------GQLKFPYIYPDPESRRLRAALAKDS----GLESD---HILVGCGAD 156
           PPE+ EA       G  ++P   P P    LRAA+A       GLE D    +LV  GA 
Sbjct: 39  PPEMLEAAQEAIAGGVNQYP---PGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGAT 95

Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD---FSLNVELIADA 213
           E I   +  +++PGD+++   P +  Y    A+ GA  V VP   D   F+L+++ +  A
Sbjct: 96  EAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAA 155

Query: 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPI----LVVLDEAYTE--FSGLESRME 267
           V   + + + + SP+NP G+++   +L  I E+ +    LV+ DE Y    F G      
Sbjct: 156 VT-PRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGAR---- 210

Query: 268 WVKKHDNLIVL-----RTFS-----KRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVA 317
               H  L  L     RT +     K   + G ++G+   P  +I  +  AKQ Y   V 
Sbjct: 211 ----HLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPLIAAVRAAKQ-YLTYVG 265

Query: 318 A-----EVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILC 367
                  VA     ++     ++++L  +R+RL   L +  F   + S   + LC
Sbjct: 266 GAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEAGF-EVHDSAGTYFLC 319

Length = 387

>gnl|CDD|163313 TIGR03537, DapC, succinyldiaminopimelate transaminase

 Score = 65.3 bits (159), Expect = 1e-11
 Identities = 85/330 (25%), Positives = 152/330 (46%), Gaps = 45/330 (13%)

Query: 110 PPEVREALGQLKFPYI--YPDPESRR-LRAALA----KDSGLESD---HILVGCGADELI 159
           PP +R+AL     P +  YP     + LR A++    +  G++ D    +L   G+ E I
Sbjct: 15  PPFIRKALID-AVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAI 73

Query: 160 DLIMRCVLDPGD---KIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAV 214
                  +DP +   +++   P + +YE  A   G     V   ++  F L +E +  ++
Sbjct: 74  FHFPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSI 133

Query: 215 EREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTEF-------SGLE 263
             E  K +++  P+NP G+      L +      E  I++  DE YTE        S LE
Sbjct: 134 LEET-KIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALE 192

Query: 264 SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA----E 319
             +E      N++   + SKR+G+ G R G+ A    +I +L R  +  N  VA+    +
Sbjct: 193 VGIE------NVLAFHSLSKRSGMTGYRSGFVAGDEKLISFL-RKLRA-NFGVASPDFVQ 244

Query: 320 VAACAALQNPIY-LEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL 378
            AA AA  +  + LE ++   ++R+   +    V     YP  + ++  +V SG+DAK  
Sbjct: 245 AAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKVGLEYLYPDATFYLWVKVPSGIDAKDY 304

Query: 379 KDDLAKMGVMI---RHYNNKELKGYVRVSV 405
              L + G+++    ++ + E +GYVRV++
Sbjct: 305 ALRLLENGIVVAPGENFGSGE-EGYVRVAL 333

The four sequences which make up the seed for this model are not closely related, although they are all members of the pfam00155 family of aminotransferases and are more closely related to each other than to anything else. Additionally, all of them are found in the vicinity of genes involved in the biosynthesis of lysine via the diaminopimelate pathway (GenProp0125), although this amount to a separation of 12 genes in the case of Sulfurihydrogenibium azorense Az-Fu1. None of these genomes contain another strong candidate for this role in the pathway. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade. Length = 350

>gnl|CDD|181402 PRK08363, PRK08363, alanine aminotransferase; Validated

 Score = 65.2 bits (159), Expect = 2e-11
 Identities = 87/332 (26%), Positives = 134/332 (40%), Gaps = 48/332 (14%)

Query: 96  DIVKIDANENPYGPPPEVREALG---QLKFPYIYPDPESRRLRAALAK------DSGLES 146
           D VK D     + PP  ++EA     +    Y  P      LR A+ K         +  
Sbjct: 39  DPVKFD-----FQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITP 93

Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN 206
           D + V     E + LI   +LDPGD+I+   P++  Y       G     VP        
Sbjct: 94  DDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGG----VPV---EYRT 146

Query: 207 VEL------IADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDE 254
           +E       I D  ++  EK K I + +PNNP G++   + L +IL    E  + V+ DE
Sbjct: 147 IEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDE 206

Query: 255 AYTE--FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP------LSIIEYLW 306
            Y    + G       + K   +IV+   SK     G R+GY  F         + E + 
Sbjct: 207 IYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAID 266

Query: 307 R-AKQPYNVSVAAEVAACAALQNPI-YLEVKEALIKERERL-FKLLKDVPFL---NPYPS 360
           + A+     +  A+ AA A L  P+ YLE     +KER    +K L ++P +    P  +
Sbjct: 267 KLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGA 326

Query: 361 YSNFILCEVTSGMDAKK-LKDDLAKMGVMIRH 391
           +  F   E     D K+ + D L +  V+  H
Sbjct: 327 FYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVH 358

Length = 398

>gnl|CDD|224090 COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

 Score = 63.1 bits (154), Expect = 6e-11
 Identities = 87/341 (25%), Positives = 137/341 (40%), Gaps = 53/341 (15%)

Query: 110 PPEVREALGQ----LKFPYIYPDPESRRLRAALAK------DSGLESDHILVGCGADELI 159
           PPE+ EAL +      F Y Y   E   L AA+A          ++ + I+   G    I
Sbjct: 40  PPEIIEALRERVDHGVFGYPYGSDE---LYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGI 96

Query: 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSD---FSLNVELIADAV 214
            L +R +  PGD +V   P +    F  A+  NG  V++ P   D   + ++ + +  A 
Sbjct: 97  SLAIRALTKPGDGVVIQTPVY--PPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAF 154

Query: 215 EREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE----------AYTEFS 260
             E+ K   L +P+NP G +   E+L KI E+     + V+ DE           +  F+
Sbjct: 155 VDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFA 214

Query: 261 GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWR---AKQPYNVSV 316
            L  R       DN I L + SK   LAGL+  Y       +     +       +  S 
Sbjct: 215 SLSER-----FADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSA 269

Query: 317 AAEVAACAALQN--PIYLEVKEALIKER----ERLFKLLKDVPFLNPYPSYSNFILCEVT 370
              +A  AA     P   E+ E L   R    + L K L  V    P  +Y  ++ C   
Sbjct: 270 LGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCREL 329

Query: 371 SGMDAKKLKD---DLAKMGVMIRHYNNKELKGYVRVSVGKP 408
            G+D  +L +   + AK+ +       +E  G+VR++   P
Sbjct: 330 -GLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACP 369

Length = 388

>gnl|CDD|180403 PRK06107, PRK06107, aspartate aminotransferase; Provisional

 Score = 61.7 bits (150), Expect = 2e-10
 Identities = 73/315 (23%), Positives = 132/315 (41%), Gaps = 28/315 (8%)

Query: 89  QLGRKPEDIVKIDANENPYGPPPEVREAL------GQLKFPYIYPDPESRR-LRAALAKD 141
           +L      IV +   E  +  P  +++A       G+ K+  +   P  R+ + A L + 
Sbjct: 27  ELRAAGRSIVDLTVGEPDFDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERR 86

Query: 142 SGLE--SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGA--AVVKV 197
           +GL    + I VG GA + I L +   L+ GD+++   P +  Y      N     +V  
Sbjct: 87  NGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVAC 146

Query: 198 PRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMP-ILVVL 252
           P +  F L  E +  A+   + + + L +P+NP G++ +  +L  +    L  P +LV+ 
Sbjct: 147 PEEQGFKLTPEALEAAIT-PRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLT 205

Query: 253 DEAYTEFSGLESRMEWV-----KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR 307
           D+ Y      +     +     +  D ++V    SK   + G R+GY A P  +I  + +
Sbjct: 206 DDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADLIAAINK 265

Query: 308 -----AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYS 362
                +  P ++S AA  AA    Q+ +   V     + R+    LL  +P L+      
Sbjct: 266 LQSQSSSCPSSISQAAAAAALNGDQSFVTESVA-VYKQRRDYALALLNAIPGLSCLVPDG 324

Query: 363 NFILCEVTSGMDAKK 377
            F L    +G+  K 
Sbjct: 325 AFYLYVNCAGLIGKT 339

Length = 402

>gnl|CDD|236119 PRK07865, PRK07865, N-succinyldiaminopimelate aminotransferase; Reviewed

 Score = 61.5 bits (150), Expect = 2e-10
 Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 32/207 (15%)

Query: 110 PPEVREALGQLKFPYIYP----DPESRR-LRAALAKD---SGLESDHILVGCGADELIDL 161
           PP ++EAL        YP     PE R  +   LA+    +GL+   +L   G+ EL+  
Sbjct: 42  PPVIQEALAAAADAPGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAW 101

Query: 162 IMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPK 220
           +   + L PGD +V     +  YE  A + GA VV+       SL        +  ++P 
Sbjct: 102 LPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRAD-----SL------TELGPQRPA 150

Query: 221 CIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAYTEFSGLESRMEWV------- 269
            I+L SP+NP G ++  + L K++    E   +V  DE Y E  G ++    +       
Sbjct: 151 LIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLEL-GWDAEPVSILDPRVCG 209

Query: 270 KKHDNLIVLRTFSKRAGLAGLRVGYGA 296
             H  L+ + + SK++ LAG R G+ A
Sbjct: 210 GDHTGLLAVHSLSKQSNLAGYRAGFVA 236

Length = 364

>gnl|CDD|181268 PRK08175, PRK08175, aminotransferase; Validated

 Score = 60.1 bits (146), Expect = 7e-10
 Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 28/300 (9%)

Query: 92  RKPEDIVKIDANENPYGP-PPEVREALGQL-KFPYIYPDPESR---RLRAALAK------ 140
           R+ EDI+      NP GP PP + E L ++ + P  +    SR   RLR A+++      
Sbjct: 26  RRGEDIIDFSMG-NPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRY 84

Query: 141 DSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199
           D  ++ +   +V  G+ E +  +M   LD GD ++   P++ ++ + A + GA V  VP 
Sbjct: 85  DVDIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPL 144

Query: 200 KSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLD 253
                   EL   A+     KPK + L  P+NP    +  E   K++ +     +LVV D
Sbjct: 145 VEGVDFFNEL-ERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHD 203

Query: 254 EAYTE--FSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309
            AY +  + G +  S M+     D  +   T SK   +AG R+G+      ++  L R K
Sbjct: 204 LAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIK 263

Query: 310 Q--PYNVSVAAEVAACAALQNP--IYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFI 365
               Y      +VAA AAL+       ++ E   + R+ L K L +  ++   P  S ++
Sbjct: 264 SYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYV 323

Length = 395

>gnl|CDD|188462 TIGR03947, viomycin_VioD, capreomycidine synthase

 Score = 58.7 bits (142), Expect = 2e-09
 Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 7/173 (4%)

Query: 133 RLRAALAKDSGLESDH-ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNG 191
            LRAA+A        H ++   G+ E I L++  +L PGD++V   P +      A   G
Sbjct: 55  GLRAAIADRWRGGDAHVVMTTHGSSEAIYLVLTALLRPGDEVVVVDPAYHSLSHLAVATG 114

Query: 192 AAVVKVPRKSDFSLNVELIA-DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP--- 247
             V   P  +      +L A  A+   + + + +  P+NP G+ +   +L ++LE     
Sbjct: 115 CEVRPWPLLAVRGFRPDLDALRALLTPRTRAVVVNFPHNPTGASVTPRELDELLERAARS 174

Query: 248 -ILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
             +++ D A+ +         +    +D +I   T SK  GL GLRVG+   P
Sbjct: 175 GAVLLWDNAFADLVHDAPPLPDPSALYDRVISFGTLSKAFGLPGLRVGWCVGP 227

Members of this family are the enzyme capreomycidine synthase, which performs the second of two steps in the biosynthesis of 2S,3R-capreomycidine from arginine. Capreomycidine is an unusual amino acid used by non-ribosomal peptide synthases (NRPS) to make the tuberactinomycin class of peptide antibiotic. The best characterized member is VioD from the biosynthetic pathway for viomycin [Cellular processes, Biosynthesis of natural products]. Length = 359

>gnl|CDD|181026 PRK07550, PRK07550, hypothetical protein; Provisional

 Score = 58.4 bits (142), Expect = 2e-09
 Identities = 50/214 (23%), Positives = 86/214 (40%), Gaps = 33/214 (15%)

Query: 106 PYGPPPEVREALGQL-------KFPYIYPDPESRRLRAALAKDSG------LESDHILVG 152
            Y PPPE+  AL +         +  +   PE   LR A A          +  + + + 
Sbjct: 40  GYPPPPELLRALAEAAADPAAHLYGPVEGLPE---LREAYAAHYSRLYGAAISPEQVHIT 96

Query: 153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL--NVELI 210
            G ++     M  +   GD+++   P +  ++    + G   V +P      L  +    
Sbjct: 97  SGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAA 156

Query: 211 ADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFS------ 260
              +   + + I L +PNNP G +   E L ++ ++     I ++LDE Y +F       
Sbjct: 157 EALI-TPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAP 215

Query: 261 -GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
             L +  +W    D L+ L +FSK   L G RVG
Sbjct: 216 HDLFADPDW---DDTLVHLYSFSKSYALTGHRVG 246

Length = 386

>gnl|CDD|188123 TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine family aminotransferase

 Score = 57.7 bits (140), Expect = 4e-09
 Identities = 68/302 (22%), Positives = 131/302 (43%), Gaps = 44/302 (14%)

Query: 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK---VPRK 200
           L +D +++  G  + I++ +  + +PG  I+   P F +Y+  AA +G  V     +P K
Sbjct: 94  LTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEK 153

Query: 201 S---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLD 253
               D    +E +AD    EK   I + +P+NP GS+ + + L KI E+     I ++ D
Sbjct: 154 DWEIDLD-GLESLAD----EKTVAIVVINPSNPCGSVFSRDHLQKIAEVAEKLGIPIIAD 208

Query: 254 EAYTEFSGLESRMEWVKKHDNL---IVLRTFSKRAGLAGLRVGY-----------GAFPL 299
           E Y      ++    +    ++   + L   SKR  + G R+G+                
Sbjct: 209 EIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQ 268

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPI--YLEVKEALIKER-ERLFKLLKDVPFLN 356
            +   L R   P   +   + A    L+N    + + K +++K   E  ++ LKD+P L 
Sbjct: 269 GLKNLLQRILGP---ATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLV 325

Query: 357 -PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-------ELKGYVRVSVGKP 408
            P P  + +++ ++   +   ++KDD+     + R  +          L  +VR+++  P
Sbjct: 326 CPKPEGAMYLMVKLELEL-FPEIKDDVDFCEKLAREESVICLPGSAFGLPNWVRITITVP 384

Query: 409 EH 410
           E 
Sbjct: 385 ES 386

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley. Length = 403

>gnl|CDD|181642 PRK09082, PRK09082, methionine aminotransferase; Validated

 Score = 56.8 bits (138), Expect = 7e-09
 Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 39/212 (18%)

Query: 105 NPYGPP----PEVREALGQLKFPYIY---PDPESRRLRAALAKDSGLESDHILVGCGADE 157
           N Y PP      +REA+   K   +Y    D +S                 I V  GA E
Sbjct: 61  NQY-PPMTGVAALREAIAA-KTARLYGRQYDADSE----------------ITVTAGATE 102

Query: 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNVELIADAVER 216
            +   +  ++ PGD+++   P++  Y     + G   V+V  +  DF ++ +  A A+  
Sbjct: 103 ALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAIS- 161

Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTE--FSGLESRMEWVK 270
            + + I L +P+NP G++ +  D+  + ++     I V+ DE Y    F G  +    V 
Sbjct: 162 PRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDG--AGHASVL 219

Query: 271 KHDNL----IVLRTFSKRAGLAGLRVGYGAFP 298
           +H  L     V+ +F K   + G +VGY   P
Sbjct: 220 RHPELRERAFVVSSFGKTYHVTGWKVGYCVAP 251

Length = 386

>gnl|CDD|183514 PRK12414, PRK12414, putative aminotransferase; Provisional

 Score = 55.2 bits (133), Expect = 3e-08
 Identities = 49/210 (23%), Positives = 97/210 (46%), Gaps = 14/210 (6%)

Query: 169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSP 227
           PGD+++   P+F  Y     + GA  V +     DF +N + +A A+   + + I + +P
Sbjct: 113 PGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAIT-PRTRMIIVNTP 171

Query: 228 NNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSGLESRMEWVKKHDNL----IVLR 279
           +NP  ++ +  DL ++ ++     I+++ DE Y       +R   + +H  L    +++ 
Sbjct: 172 HNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVS 231

Query: 280 TFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNP-IYLEVKE 336
           +F K   + G RVGY   P  +++ + +  Q   ++     + A   AL  P  YL +  
Sbjct: 232 SFGKSYHVTGWRVGYCLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLGA 291

Query: 337 ALIKERERLFKLLKDVPFLNPYPSYSNFIL 366
              ++R+ L + L    F    PS  +F +
Sbjct: 292 FYQRKRDLLARELAGSRF-ELLPSEGSFFM 320

Length = 384

>gnl|CDD|178004 PLN02376, PLN02376, 1-aminocyclopropane-1-carboxylate synthase

 Score = 55.1 bits (132), Expect = 3e-08
 Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 35/195 (17%)

Query: 132 RRLRAALAKDSG--------LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY 183
           ++ R A+A   G         + + +++  GA    + IM C+ DPGD  +   P +  +
Sbjct: 97  KKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAF 156

Query: 184 EFDAA-VNGAAVVKVPRKSDFSLNVELIADAVE---------REKPKCIFLTSPNNPDGS 233
           + D     G  ++ VP  S  S N +L  DA +          +K K + LT+P+NP G+
Sbjct: 157 DRDLRWRTGVEIIPVPCSS--SDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGT 214

Query: 234 IINDEDLLKILEM----PILVVLDEAY--TEFSG--LESRMEWVKKHD------NLI-VL 278
           +++ + L  ++       I +V+DE Y  T F+G    S  E V   D      +LI ++
Sbjct: 215 MLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIV 274

Query: 279 RTFSKRAGLAGLRVG 293
            + SK  GL G RVG
Sbjct: 275 YSLSKDMGLPGFRVG 289

Length = 496

>gnl|CDD|181749 PRK09276, PRK09276, LL-diaminopimelate aminotransferase; Provisional

 Score = 54.5 bits (132), Expect = 3e-08
 Identities = 73/281 (25%), Positives = 124/281 (44%), Gaps = 32/281 (11%)

Query: 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIA 211
           G+ E I  I    ++PGD ++   P + +Y+      G     +P K  + F  +++ I 
Sbjct: 101 GSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIP 160

Query: 212 DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE--FSGLE-- 263
           + V + K K +F+  PNNP G++ + E   ++++      I+V  D AY+E  + G +  
Sbjct: 161 EDVAK-KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPP 219

Query: 264 SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSV----AAE 319
           S +E     D  I   + SK   + G R+G+      +I  L + K   NV      A +
Sbjct: 220 SFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNADLIAGLGKVKS--NVDSGVFQAIQ 277

Query: 320 VAACAALQNPIYLEVKEALIK----ERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMD- 374
            A  AAL  P   EV E L K     R+ L + L+ +      P  + ++   V  G   
Sbjct: 278 EAGIAALNGP--QEVVEELRKIYQERRDILVEGLRKLGLEVEPPKATFYVWAPVPKGYTS 335

Query: 375 ---AKKLKDDLAKMGVMIRHYN--NKELKGYVRVSVGKPEH 410
              A  L   L K GV++   N   +  +GY R+++  P+ 
Sbjct: 336 AEFATLL---LDKAGVVVTPGNGFGEYGEGYFRIALTVPDE 373

Length = 385

>gnl|CDD|235989 PRK07324, PRK07324, transaminase; Validated

 Score = 53.0 bits (128), Expect = 1e-07
 Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 21/228 (9%)

Query: 115 EALGQLKFPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK 172
           + LGQ K  Y  I   PE +   A+L +   ++ ++IL   GA     L++  +++PGD 
Sbjct: 49  QELGQKKLTYGWIEGSPEFKEAVASLYQ--NVKPENILQTNGATGANFLVLYALVEPGDH 106

Query: 173 IVDCPPTFT-MYEFDAAVNGAAV--VKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN 229
           ++   PT+  +Y+   ++ GA V   ++  ++ +  +++ +   V R   K I + + NN
Sbjct: 107 VISVYPTYQQLYDIPESL-GAEVDYWQLKEENGWLPDLDELRRLV-RPNTKLICINNANN 164

Query: 230 PDGSIINDEDLLKILEMP------ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSK 283
           P G++++   L +I+E+       +L   DE Y       S       ++  I   + SK
Sbjct: 165 PTGALMDRAYLEEIVEIARSVDAYVLS--DEVYRPLDEDGSTPSIADLYEKGISTNSMSK 222

Query: 284 RAGLAGLRVGYGAFPLSIIEYLWRAKQPYN---VSVAAEVAACAALQN 328
              L G+RVG+ A    +I+ L R  + Y      V  ++ A  AL++
Sbjct: 223 TYSLPGIRVGWIAANEEVIDIL-RKYRDYTMICAGVFDDMLASLALEH 269

Length = 373

>gnl|CDD|102370 PRK06425, PRK06425, histidinol-phosphate aminotransferase; Validated

 Score = 52.5 bits (126), Expect = 1e-07
 Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 34/264 (12%)

Query: 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV-ELIADAVEREKPKCIFLTSPNNP 230
            I+   P F  Y+  A  +G       R S    N+     + +       IF+ SP+NP
Sbjct: 81  NIIIVEPNFNEYKGYAFTHGI------RISALPFNLINNNPEILNNYNFDLIFIVSPDNP 134

Query: 231 DGSIINDEDLLKILE----MPILVVLDEAYTEF--SGLESRMEWVKKHDNLIVLRTFSKR 284
            G++I+ + LL I E       L+ +DEA+ +F  +  E  +   + + N+I+ R+ +K 
Sbjct: 135 LGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKI 194

Query: 285 AGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSV-------AAEVAACAALQNPIYLEVKEA 337
            G+  LR+GY A     ++   +  +P++V         + ++   A     I    +  
Sbjct: 195 LGIPSLRIGYIATDDYNMKISRKITEPWSVCDPAIDFIRSIDLDYVAKHSLDIMENERSY 254

Query: 338 LIKERE-RLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE 396
           LI   E   F+   D       PS +NFI        DA      L K G+++R  ++ E
Sbjct: 255 LINNLEAMGFRAAGD-------PS-ANFI---TFMIPDAHDFYSYLLKNGILVRLLDDYE 303

Query: 397 LKG--YVRVSVGKPEHTDALMECL 418
             G  Y+R+++ +      L+  L
Sbjct: 304 CLGEQYIRIAIRRRSFNIKLVNAL 327

Length = 332

>gnl|CDD|181219 PRK08068, PRK08068, transaminase; Reviewed

 Score = 52.6 bits (127), Expect = 1e-07
 Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 22/202 (10%)

Query: 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCI 222
           C+++PGD I+   P +  Y    A+  A    +P   +++F  +   I + V  EK K +
Sbjct: 113 CLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEV-AEKAKLM 171

Query: 223 FLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAY--TEFSGLE--SRMEWVKKHDN 274
           +L  PNNP G++       + +    +  I VV D AY    F G +  S ++     D 
Sbjct: 172 YLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDV 231

Query: 275 LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSV--AAEVAACAALQNP--- 329
            I L T SK   +AG RV +     S+IE +   +    VS+  A + AA  AL +    
Sbjct: 232 GIELYTLSKTFNMAGWRVAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSC 291

Query: 330 ------IYLEVKEALIKERERL 345
                  Y   + A I     +
Sbjct: 292 VAELVARYESRRNAFISACREI 313

Length = 389

>gnl|CDD|180188 PRK05664, PRK05664, threonine-phosphate decarboxylase; Reviewed

 Score = 52.3 bits (126), Expect = 2e-07
 Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 12/193 (6%)

Query: 207 VELIADAVEREKPKC--IFLTSPNNPDGSIINDEDLL----KILEMPILVVLDEAYTEFS 260
            EL    VE        + + +PNNP G   +   LL    ++      +V+DEA+ + +
Sbjct: 111 RELDEAEVEAALDSLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNT 170

Query: 261 GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEV 320
              S +        LIVLR+F K  GLAG R+G+     +++  L     P+ VS     
Sbjct: 171 PQHS-LAACAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLGPWTVSGPTRW 229

Query: 321 AACAALQN-PIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLK 379
            A AAL + P     +E L+   +RL  LL+    L P    + F     T   DA  L 
Sbjct: 230 LAQAALADTPWQRRQRERLLAASQRLAALLRRHG-LTPAGGCALFQWV-RTE--DAAALH 285

Query: 380 DDLAKMGVMIRHY 392
           + LA+ G++ R +
Sbjct: 286 EFLARRGILTRLF 298

Length = 330

>gnl|CDD|180937 PRK07337, PRK07337, aminotransferase; Validated

 Score = 51.6 bits (124), Expect = 4e-07
 Identities = 70/277 (25%), Positives = 120/277 (43%), Gaps = 38/277 (13%)

Query: 78  QPILPFEVLSI-----QLGRKPEDIVKIDANENPYGPPPEVREAL------------GQL 120
             I PF V+ +      L R   DI+ +   E  +  P  V EA               L
Sbjct: 8   DAIEPFYVMELAKEAQALERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRGVTQYTSAL 67

Query: 121 KFPYIYPDPESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
                   P    + A  A+  GL+     I+V  GA   + L    +++ GD+++   P
Sbjct: 68  GLA-----PLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDP 122

Query: 179 TFTM-YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSI 234
           ++     F AA  G  V+ VP  S  +   +L A  VE    E+ + + L SP+NP G+ 
Sbjct: 123 SYPCNRHFVAAAEGRPVL-VP--SGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTS 179

Query: 235 INDEDLLKILEMPI----LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGL 290
           I  ++L +I+E         ++DE Y   S   + +  +   D++I + +FSK   + G 
Sbjct: 180 IAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNMTGW 239

Query: 291 RVGYGAFPLSIIEYLWRAKQPYNVSV-AAEVAACAAL 326
           R+G+   P +++    +  Q  N+ + A+ +A  AAL
Sbjct: 240 RLGWLVVPEALVGTFEKLAQ--NLFICASALAQHAAL 274

Length = 388

>gnl|CDD|181595 PRK08960, PRK08960, hypothetical protein; Provisional

 Score = 49.7 bits (119), Expect = 1e-06
 Identities = 61/222 (27%), Positives = 99/222 (44%), Gaps = 24/222 (10%)

Query: 134 LRAALA----KDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE-FD 186
           LR A+A    +  G++ D   ILV  G    + L    ++DPG   +   P +     F 
Sbjct: 74  LREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFL 133

Query: 187 AAVNGAAV-VKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
             V GAA  V V   S + L   L+ +           + SP NP G++++ ++L  + +
Sbjct: 134 RLVEGAAQLVPVGPDSRYQLTPALV-ERHWNADTVGALVASPANPTGTLLSRDELAALSQ 192

Query: 246 -----MPILVVLDEAYTEFSGLESRMEW---VKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297
                   LVV DE Y    GL   ++    ++  D+  VL +FSK  G+ G R+G+   
Sbjct: 193 ALRARGGHLVV-DEIY---HGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVA 248

Query: 298 PLSIIEYLWRAKQPYNVSVA--AEVAACAALQNPIYLEVKEA 337
           P + +  L +  Q   +S +  A+ AA A  + P  L + EA
Sbjct: 249 PPAAVPELEKLAQNLYISASTPAQHAALACFE-PETLAILEA 289

Length = 387

>gnl|CDD|236517 PRK09440, avtA, valine--pyruvate transaminase; Provisional

 Score = 49.5 bits (119), Expect = 2e-06
 Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 12/81 (14%)

Query: 221 CIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAY-TEFSGL---ESRMEWVKKH 272
            I ++ P NP G+++ DE+L K+  +     I +++D AY   F G+   E+   W   +
Sbjct: 182 AICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLW---N 238

Query: 273 DNLIVLRTFSKRAGLAGLRVG 293
            N+I+  + SK  GL G+R G
Sbjct: 239 PNIILCMSLSK-LGLPGVRCG 258

Length = 416

>gnl|CDD|180281 PRK05839, PRK05839, hypothetical protein; Provisional

 Score = 48.9 bits (117), Expect = 3e-06
 Identities = 55/221 (24%), Positives = 101/221 (45%), Gaps = 31/221 (14%)

Query: 178 PTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKC--IFLTSPNNPDGS 233
           P + +YE  A  + A V+ +P  +++DF+ ++       E+E  +   + L SPNNP G 
Sbjct: 117 PFYQIYEGAAIASRAKVLLMPLTKENDFTPSLN------EKELQEVDLVILNSPNNPTGR 170

Query: 234 IINDEDLL----KILEMPILVVLDEAYTEF-------SGLESRMEWVKKHD--NLIVLRT 280
            ++ E+L+      L+   +++ DE Y+E        S LE+ +  V      N++V+ +
Sbjct: 171 TLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASIL-VGNESFKNVLVINS 229

Query: 281 FSKRAGLAGLRVGYGAFPLSIIE-YL-WRAKQPYNVSVAAEVAACAALQNPIYLEVKEAL 338
            SKR+   GLR G+ A   SI++ Y  +R        +  + AA  A  +    E  E  
Sbjct: 230 ISKRSSAPGLRSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWLD---DEHAEFF 286

Query: 339 IKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMD-AKKL 378
                +  KL +++      P  + ++   V +  +  KKL
Sbjct: 287 RNIYAKNLKLAREI-LGITIPPATFYVWLPVDNDEEFTKKL 326

Length = 374

>gnl|CDD|178262 PLN02656, PLN02656, tyrosine transaminase

 Score = 48.8 bits (116), Expect = 3e-06
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 12/138 (8%)

Query: 129 PESRRLRAA-LAKD--SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
           P++RR  A  L++D    L  D + +  G  + ID+ +  +  PG  I+   P F +YE 
Sbjct: 76  PQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYEL 135

Query: 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLK 242
            AA     V  V    +    V+L  DAVE    +    + + +P NP G++ + + L K
Sbjct: 136 CAAFRHLEVRYVDLLPEKGWEVDL--DAVEALADQNTVALVIINPGNPCGNVYSYQHLKK 193

Query: 243 ILE----MPILVVLDEAY 256
           I E    + ILV+ DE Y
Sbjct: 194 IAETAEKLKILVIADEVY 211

Length = 409

>gnl|CDD|163316 TIGR03542, DAPAT_plant, LL-diaminopimelate aminotransferase

 Score = 48.2 bits (115), Expect = 5e-06
 Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 18/140 (12%)

Query: 222 IFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTEF---SGL-ESRMEWVKKHD 273
           I+L SPNNP G+++  E L ++     E   L++ D AY+ F     L  S  E      
Sbjct: 177 IYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGARF 236

Query: 274 NLIVLRTFSKRAGLAGLRVGYGAFP-------LSIIEYLWRAKQ--PYN-VSVAAEVAAC 323
             I  R+FSK AG  G+R+G+   P          +   W  +Q   +N  S   + AA 
Sbjct: 237 CAIEFRSFSKTAGFTGVRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAE 296

Query: 324 AALQNPIYLEVKEALIKERE 343
           A         + EA+    E
Sbjct: 297 AGYAGEGLQPILEAISYYME 316

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Length = 402

>gnl|CDD|215074 PLN00145, PLN00145, tyrosine/nicotianamine aminotransferase; Provisional

 Score = 47.8 bits (114), Expect = 6e-06
 Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 129 PESRRLRAALAKD--SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           P  R +   L++D    L +D I +  G  + I++IM  +  PG  I+   P + +YE  
Sbjct: 98  PARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEAR 157

Query: 187 AAVNGAAVVK---VPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243
           A  +G  V     +P +  + +++E + +A+  E    + + +PNNP GS+ + E L KI
Sbjct: 158 AVFSGLEVRHFDLLPER-GWEVDLEGV-EALADENTVAMVIINPNNPCGSVYSYEHLAKI 215

Query: 244 LE----MPILVVLDEAY 256
            E    + ILV+ DE Y
Sbjct: 216 AETARKLGILVIADEVY 232

Length = 430

>gnl|CDD|213963 TIGR04350, C_S_lyase_PatB, putative C-S lyase

 Score = 46.5 bits (111), Expect = 2e-05
 Identities = 80/341 (23%), Positives = 143/341 (41%), Gaps = 48/341 (14%)

Query: 110 PPEVREALGQ-LKFP-YIYPDPESRRLRAA---LAK--DSGLESDHILVGCGADELIDLI 162
           PP V EAL Q L+ P + Y  P      A    LA+     ++ + I+   G    +   
Sbjct: 40  PPAVLEALKQRLEHPVFGYTLPPDSLYAAVINWLAQRHGWQIDPEWIVFLPGVVPSLFAA 99

Query: 163 MRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSD---FSLNVELIADAVERE 217
           +R +  PG+ ++   P +    F +AV  NG  +V  P K D   +  ++E + DA+  E
Sbjct: 100 VRALTAPGEGVIVQTPVY--PPFLSAVKSNGRELVLNPLKLDPGRYRFDLEDLEDAI-TE 156

Query: 218 KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-------SRM 266
           K + + L SP+NP G +   E+L ++ E+     ++VV DE + +            S  
Sbjct: 157 KARLLLLCSPHNPVGRVWTREELTRLAELCLRHNVVVVSDEIHADLVYPPNKHIPLASLS 216

Query: 267 EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-----LSIIEYLWRAK-QPYNV--SVAA 318
             + +    + L +  K   +AGL + +   P      +  E   R   Q  N+   VA 
Sbjct: 217 PEIAE--RTVTLLSPGKTFNIAGLNISFAIIPNPELRRAFQEAAQRVHIQHGNLFGYVAF 274

Query: 319 EVAACAALQNPIYLE-VKEALIKERERLFKLL-KDVPFLN---PYPSYSNFILCEVTSGM 373
           E    A  +   +L+ +   L   R+ + + + K +P +    P  +Y  ++ C    G+
Sbjct: 275 E---AAYREGEPWLDALLAYLRGNRDLVEEFIAKRLPQIRVRPPEATYLAWLDCR-ALGL 330

Query: 374 DAKKLKDDL---AKMGVMIRHYNNKELKGYVRVSVGKPEHT 411
           D   L+      A +G+           G++R++ G P  T
Sbjct: 331 DDADLRAFFIEQAGLGLNPGISFGDGGSGFMRLNFGCPRST 371

Members of this subfamily are probable C-S lyases from a family of pyridoxal phosphate-dependent enzymes that tend to be (mis)annotated as probable aminotransferases. One member is PatB of Bacillus subtilis, a proven C-S-lyase. Another is the virulence factor cystalysin from Treponema denticola, whose hemolysin activity may stem from H2S production. Members of the seed alignment occur next to examples of the enzyme 5-histidylcysteine sulfoxide synthase, from ovothiol A biosynthesis, and would be expected to perform a C-S cleavage of 5-histidylcysteine sulfoxide to leave 1-methyl-4-mercaptohistidine (ovothiol A). Length = 384

>gnl|CDD|181580 PRK08912, PRK08912, hypothetical protein; Provisional

 Score = 46.5 bits (111), Expect = 2e-05
 Identities = 80/315 (25%), Positives = 122/315 (38%), Gaps = 66/315 (20%)

Query: 83  FEVLSIQLGRKPEDIVKIDANEN-----PYGP-PPEVREALGQ--LKFPYIYPD----PE 130
           FEV+S QL R+   I       N     P  P P +VR A     L     YP     PE
Sbjct: 16  FEVMS-QLAREHGAI-------NLGQGFPDDPGPEDVRRAAADALLDGSNQYPPMMGLPE 67

Query: 131 SRRLRAALAKDS----GLESD---HILVGCGADE-LIDLIMRCVLDPGDKIVDCPPTFTM 182
              LR A+A       GL+ D    ++V  GA E L   ++  +++PGD++V   P +  
Sbjct: 68  ---LRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALL-ALVEPGDEVVLFQPLYDA 123

Query: 183 YEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241
           Y       G     V  +   + L    +A A    + K + L +P NP G +   E+L 
Sbjct: 124 YLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFS-PRTKAVLLNNPLNPAGKVFPREELA 182

Query: 242 KILEMPI----LVVLDEAYTE--FSGLESRMEWVKKHDNLIVL-----RTF-----SKRA 285
            + E       + + DE +    F G          H  L+ L     RT       K  
Sbjct: 183 LLAEFCQRHDAVAICDEVWEHVVFDGRR--------HIPLMTLPGMRERTVKIGSAGKIF 234

Query: 286 GLAGLRVGYGAFPLSIIEYLWRAKQ------PYNVSVAAEVAACAALQNPIYLEVKEALI 339
            L G +VG+      ++  L +A Q      P N+  A  VA      +  +  ++  L 
Sbjct: 235 SLTGWKVGFVCAAPPLLRVLAKAHQFLTFTTPPNLQAA--VAYGLGKPDDYFEGMRADLA 292

Query: 340 KERERLFKLLKDVPF 354
           + R+RL   L+ + F
Sbjct: 293 RSRDRLAAGLRRIGF 307

Length = 387

>gnl|CDD|226485 COG3977, COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

 Score = 44.8 bits (106), Expect = 5e-05
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 12/85 (14%)

Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAY-TEFSGL---ESRMEW 268
           E    I ++ P NP G+++ DE+L K+  +     I +++D AY   F G+   ++   W
Sbjct: 178 ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLW 237

Query: 269 VKKHDNLIVLRTFSKRAGLAGLRVG 293
              ++N+I+  + SK  GL G R G
Sbjct: 238 ---NENIILCMSLSK-LGLPGSRCG 258

Length = 417

>gnl|CDD|236393 PRK09147, PRK09147, succinyldiaminopimelate transaminase; Provisional

 Score = 44.1 bits (105), Expect = 9e-05
 Identities = 68/266 (25%), Positives = 116/266 (43%), Gaps = 50/266 (18%)

Query: 70  HLRKLKPYQPILPFEVLSIQL--GRKPE---DIVKIDANENPYGPPPE-VREA----LGQ 119
            L +L+PY    PFE L   L  G  P      + +   E P  P P  +++A    L  
Sbjct: 4   RLDRLQPY----PFEKLR-ALFAGVTPPADLPPISLSIGE-PKHPTPAFIKDALAANLDG 57

Query: 120 L-KFPYIYPDPESRRLRAALA----KDSGLES----DHILVGCGADELIDLIMRCVLDPG 170
           L  +P     P    LR A+A    +  GL +      +L   G+ E +    + V+D  
Sbjct: 58  LASYPTTAGLPA---LREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRD 114

Query: 171 DK--IVDCP-PTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLT 225
               +V CP P + +YE  A + GA    +     ++F+ + + +   V   + + +F+ 
Sbjct: 115 GPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWA-RTQLLFVC 173

Query: 226 SPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEF---------SGLESRMEWVKKH 272
           SP NP G+++  +D  K+  +      ++  DE Y+E            LE+  E + + 
Sbjct: 174 SPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAE-LGRD 232

Query: 273 D--NLIVLRTFSKRAGLAGLRVGYGA 296
           D   L+V  + SKR+ + GLR G+ A
Sbjct: 233 DFKRLVVFHSLSKRSNVPGLRSGFVA 258

Length = 396

>gnl|CDD|180317 PRK05942, PRK05942, aspartate aminotransferase; Provisional

 Score = 43.9 bits (104), Expect = 9e-05
 Identities = 66/256 (25%), Positives = 116/256 (45%), Gaps = 18/256 (7%)

Query: 167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFL 224
           ++PGD ++   P +  +     + GA +  +  K   D+ +++  I + V + + K ++ 
Sbjct: 118 VNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQ-QAKILYF 176

Query: 225 TSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE--FSGLE--SRMEWVKKHDNLI 276
             P+NP  +    E   +I+       I++V D  Y E  F G +  S +E     D  +
Sbjct: 177 NYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGV 236

Query: 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNP-IYLE 333
              T SK   +AG RVG+      II+ L   K    Y +  A + AA  ALQ P  YL+
Sbjct: 237 EFHTLSKTYNMAGWRVGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQ 296

Query: 334 -VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLK-DDLAKMGVMIRH 391
            V+E     R+ L + L ++ +  P    + ++      GM +     + L K GV++  
Sbjct: 297 QVQERYRTRRDFLIQGLGELGWNIPPTKATMYLWVPCPVGMGSTDFALNVLQKTGVVVTP 356

Query: 392 YN--NKELKGYVRVSV 405
            N   +  +GYVR+S+
Sbjct: 357 GNAFGEGGEGYVRISL 372

Length = 394

>gnl|CDD|181053 PRK07590, PRK07590, L,L-diaminopimelate aminotransferase; Validated

 Score = 43.7 bits (104), Expect = 1e-04
 Identities = 30/86 (34%), Positives = 38/86 (44%), Gaps = 8/86 (9%)

Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTEF---SGL-ESRMEW 268
           EK   I+L  PNNP G+++  E L        E   L++ D AY  F     L  S  E 
Sbjct: 175 EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEI 234

Query: 269 VKKHDNLIVLRTFSKRAGLAGLRVGY 294
               +  I  R+FSK AG  G R  Y
Sbjct: 235 EGARECAIEFRSFSKTAGFTGTRCAY 260

Length = 409

>gnl|CDD|215119 PLN02187, PLN02187, rooty/superroot1

 Score = 43.9 bits (103), Expect = 1e-04
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 9/120 (7%)

Query: 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK---VPRK 200
           L  + I +  G ++ I+++   +  P   I+   P F  Y+  AA +G  V K   +P K
Sbjct: 129 LTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEK 188

Query: 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE----MPILVVLDEAY 256
            ++ +++E I +A+  E    + + +PNNP G++ + + L K+ E    + I+V+ DE Y
Sbjct: 189 -EWEIDLEGI-EAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVY 246

Length = 462

>gnl|CDD|237361 PRK13355, PRK13355, bifunctional HTH-domain containing protein/aminotransferase; Provisional

 Score = 43.6 bits (103), Expect = 1e-04
 Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 18/166 (10%)

Query: 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVN---GAAVVKV- 197
             ++ D I  G G  ELI+L M  +LD GD+++   P + ++   A VN   G AV    
Sbjct: 204 PNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWT--ACVNLAGGTAVHYRC 261

Query: 198 PRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLD 253
             +S++  +++ I   +   + K I + +PNNP G++   E L +I+++     +++  D
Sbjct: 262 DEQSEWYPDIDDIRSKIT-SRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSD 320

Query: 254 EAYTE--FSGLESRMEWVKKHDNLIVLRTF---SKRAGLAGLRVGY 294
           E Y      GLE         D   V  TF   SK   +AG R+G+
Sbjct: 321 EIYDRLVMDGLEHTSIASLAPDLFCV--TFSGLSKSHMIAGYRIGW 364

Length = 517

>gnl|CDD|181674 PRK09148, PRK09148, aminotransferase; Validated

 Score = 42.4 bits (100), Expect = 3e-04
 Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 27/216 (12%)

Query: 169 PGDKIVDCP-PTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE------KPKC 221
           PGD I+ CP P++ ++ F   + G  +  VP + D     E    A+ER       KP  
Sbjct: 115 PGDVIL-CPNPSYPIHAFGFIMAGGVIRSVPAEPD-----EEFFPALERAVRHSIPKPIA 168

Query: 222 IFLTSPNNPDGSIINDEDLLKIL-----EMPILVVLDEAYTE--FSGL--ESRMEWVKKH 272
           + +  P+NP   +  D D  K +     +  I+++ D AY+E  F G    S ++     
Sbjct: 169 LIVNYPSNPTAYVA-DLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAK 227

Query: 273 DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNP- 329
           D  +   + SK   +AG R+G+      +I  L R K    Y      +VAA AAL  P 
Sbjct: 228 DVTVEFTSMSKTFSMAGWRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNGPQ 287

Query: 330 -IYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNF 364
               E++E   K R+ L +      +  P P+ S F
Sbjct: 288 DCIAEMRELYKKRRDVLVESFGRAGWDIPPPAASMF 323

Length = 405

>gnl|CDD|181738 PRK09265, PRK09265, aminotransferase AlaT; Validated

 Score = 42.5 bits (101), Expect = 3e-04
 Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 17/125 (13%)

Query: 143 GLESDHILVGCGADELIDLIMRCVLDPGDKI-VDCP--PTFTMYEFDAAVN---GAAV-V 195
            ++ D I +G G  ELI + M+ +L+ GD++ V  P  P +T     AAV+   G  V  
Sbjct: 92  DVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWT-----AAVSLSGGKPVHY 146

Query: 196 KVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVV 251
               ++ +  +++ I   +   + K I + +PNNP G++ + E L +I+E+     +++ 
Sbjct: 147 LCDEEAGWFPDLDDIRSKIT-PRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIF 205

Query: 252 LDEAY 256
            DE Y
Sbjct: 206 ADEIY 210

Length = 404

>gnl|CDD|165711 PLN00143, PLN00143, tyrosine/nicotianamine aminotransferase; Provisional

 Score = 41.5 bits (97), Expect = 5e-04
 Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 8/159 (5%)

Query: 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDF 203
           L  D + +  G     ++I++ +  P   I+   P F   E  A  +   +       + 
Sbjct: 95  LSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEK 154

Query: 204 SLNVELIA-DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE----MPILVVLDEAYTE 258
              V+L A +A+  E    + + +P NP GS+ + E L KI E    + ILV+ DE Y  
Sbjct: 155 GWEVDLDAVEAIADENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGH 214

Query: 259 F---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY 294
               S     M        +I L + SKR  + G  +G+
Sbjct: 215 IVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGW 253

Length = 409

>gnl|CDD|215327 PLN02607, PLN02607, 1-aminocyclopropane-1-carboxylate synthase

 Score = 41.8 bits (98), Expect = 6e-04
 Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 31/186 (16%)

Query: 133 RLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGA 192
           ++R   A+    + D I++  GA    +L+   + DPGD ++   PT     FD  +   
Sbjct: 110 QIRGGKAR---FDPDRIVLTAGATAANELLTFILADPGDALL--VPTPYYPGFDRDLRWR 164

Query: 193 AVVK-VPRKSDFSLNVELIADAVERE---------KPKCIFLTSPNNPDGSIINDEDLLK 242
             VK VP   D S N ++   A+E           + + + +T+P+NP G+ +    L  
Sbjct: 165 TGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLED 224

Query: 243 ILEMP----ILVVLDEAYT-------EFSG----LESRMEWVKKHDNLIVLRTFSKRAGL 287
           IL+      I +V DE Y+       EF      +E+R  +    + + ++ + SK  GL
Sbjct: 225 ILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEAR-GYKGVAERVHIVYSLSKDLGL 283

Query: 288 AGLRVG 293
            G RVG
Sbjct: 284 PGFRVG 289

Length = 447

>gnl|CDD|185613 PTZ00433, PTZ00433, tyrosine aminotransferase; Provisional

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 49/210 (23%), Positives = 92/210 (43%), Gaps = 27/210 (12%)

Query: 100 IDANE-NPYGP---PPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGA 155
           +D+ E N Y P    PE REA+                L++ + KD      ++++  G 
Sbjct: 63  VDSQECNGYPPTVGSPEAREAVATYWRNSFVHKES---LKSTIKKD------NVVLCSGV 113

Query: 156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEF--DAAVNGAAVVKVPRKSDFSLNVELIADA 213
              I + +  + D GD I+   P F  YE    A            + D+  +++ I   
Sbjct: 114 SHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRL 173

Query: 214 VEREKPKCIFLTSPNNPDGSIIND---EDLLKILE-MPILVVLDEAYTE--FSGLESRME 267
           V+ ++ K + +T+P+NP GS  +    ED++++ E + + ++ DE Y    F+G  +   
Sbjct: 174 VD-DRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNG--ATFT 230

Query: 268 WVKKHDN---LIVLRTFSKRAGLAGLRVGY 294
            V   D     ++L   +K   + G R+G+
Sbjct: 231 SVADFDTTVPRVILGGTAKNLVVPGWRLGW 260

Length = 412

>gnl|CDD|131032 TIGR01977, am_tr_V_EF2568, cysteine desulfurase family protein

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 29/174 (16%)

Query: 107 YGPPPEVREALGQ-LKFPYIYPDPESRRL-----------RAALAKDSGL-ESDHILVGC 153
           Y  P EV EA+    K     P     RL           R  LAK      S H++   
Sbjct: 10  YPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTN 69

Query: 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV---------NGAAVVKVPRKSDFS 204
            A   +++ ++ +L  GD ++      T  E ++            G  +  V   ++  
Sbjct: 70  NATTALNIALKGLLKEGDHVIT-----TPMEHNSVARPLECLKEQIGVEITIVKCDNEGL 124

Query: 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL-EMPILVVLDEAYT 257
           ++ E I  A+ +   K I ++  +N  G+I+  E++ ++  E  I  +LD A T
Sbjct: 125 ISPERIKRAI-KTNTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQT 177

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown [Unknown function, Enzymes of unknown specificity]. Length = 376

>gnl|CDD|188122 TIGR01264, tyr_amTase_E, tyrosine aminotransferase, eukaryotic

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 14/137 (10%)

Query: 135 RAALAK-----DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV 189
           R A+A      D  +E+D +++  G    I++ +  + + G  I+   P F +Y   A  
Sbjct: 79  REAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYRTLAES 138

Query: 190 NGAAVVKVPRKSDFSLNVELIA-DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE--- 245
            G  V       D S  ++L   +++  EK   + + +P+NP GS+ + + L +IL    
Sbjct: 139 MGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALVVNNPSNPCGSVFSRQHLEEILAVAE 198

Query: 246 ---MPILVVLDEAYTEF 259
              +PI+   DE Y + 
Sbjct: 199 RQCLPIIA--DEIYGDM 213

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs [Energy metabolism, Amino acids and amines]. Length = 401

>gnl|CDD|235897 PRK06959, PRK06959, putative threonine-phosphate decarboxylase; Provisional

 Score = 39.3 bits (92), Expect = 0.003
 Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 13/173 (7%)

Query: 226 SPNNPDGSIINDEDLL----KILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281
           +PNNP    +    LL    ++      +++DEA+ +     S      +   L+VLR+ 
Sbjct: 138 NPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDR-PGLVVLRSV 196

Query: 282 SKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIY-LEVKEALIK 340
            K  GLAG+R G+     +++  L  A   + VS  A  A  AA  +  +   ++E L  
Sbjct: 197 GKFFGLAGVRAGFVLAAPALLAALRDALGAWTVSGPARHAVRAAFADAAWQAAMRERLAA 256

Query: 341 ERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHY 392
           +  RL  LL+   F     P +S       T    A  L   LA+ G+  R++
Sbjct: 257 DGARLAALLRAHGFAVHATPLFS------WTDDPRAAALHAALARRGIWTRYF 303

Length = 339

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	422
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	100.0
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	100.0
PRK01533	366	histidinol-phosphate aminotransferase; Validated	100.0
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	100.0
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	100.0
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	100.0
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	100.0
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	100.0
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	100.0
PRK07392	360	threonine-phosphate decarboxylase; Validated	100.0
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	100.0
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	100.0
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	100.0
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	100.0
PRK06358	354	threonine-phosphate decarboxylase; Provisional	100.0
PRK02731	367	histidinol-phosphate aminotransferase; Validated	100.0
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	100.0
PRK00950	361	histidinol-phosphate aminotransferase; Validated	100.0
PRK09105	370	putative aminotransferase; Provisional	100.0
PRK08056	356	threonine-phosphate decarboxylase; Provisional	100.0
KOG0633	375	consensus Histidinol phosphate aminotransferase [A	100.0
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	100.0
PRK07681	399	aspartate aminotransferase; Provisional	100.0
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	100.0
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	100.0
PRK07366	388	succinyldiaminopimelate transaminase; Validated	100.0
PRK06290	410	aspartate aminotransferase; Provisional	100.0
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	100.0
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	100.0
PRK08960	387	hypothetical protein; Provisional	100.0
PRK06425	332	histidinol-phosphate aminotransferase; Validated	100.0
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	100.0
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	100.0
PRK06348	384	aspartate aminotransferase; Provisional	100.0
PRK08068	389	transaminase; Reviewed	100.0
PLN02187	462	rooty/superroot1	100.0
PRK06207	405	aspartate aminotransferase; Provisional	100.0
PLN00175	413	aminotransferase family protein; Provisional	100.0
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	100.0
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	100.0
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	100.0
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	100.0
PRK07324	373	transaminase; Validated	100.0
PRK07908	349	hypothetical protein; Provisional	100.0
PRK03321	352	putative aminotransferase; Provisional	100.0
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	100.0
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	100.0
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	100.0
PRK07337	388	aminotransferase; Validated	100.0
PRK05942	394	aspartate aminotransferase; Provisional	100.0
PTZ00433	412	tyrosine aminotransferase; Provisional	100.0
PLN02656	409	tyrosine transaminase	100.0
PRK09148	405	aminotransferase; Validated	100.0
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	100.0
PRK05839	374	hypothetical protein; Provisional	100.0
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK12414	384	putative aminotransferase; Provisional	100.0
PRK07682	378	hypothetical protein; Validated	100.0
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	100.0
KOG0257	420	consensus Kynurenine aminotransferase, glutamine t	100.0
PRK08636	403	aspartate aminotransferase; Provisional	100.0
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	100.0
PRK06108	382	aspartate aminotransferase; Provisional	100.0
PRK05957	389	aspartate aminotransferase; Provisional	100.0
PRK07550	386	hypothetical protein; Provisional	100.0
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	100.0
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	100.0
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	100.0
PRK08912	387	hypothetical protein; Provisional	100.0
PRK08361	391	aspartate aminotransferase; Provisional	100.0
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	100.0
PRK09082	386	methionine aminotransferase; Validated	100.0
PRK09265	404	aminotransferase AlaT; Validated	100.0
PRK06855	433	aminotransferase; Validated	100.0
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK07683	387	aminotransferase A; Validated	100.0
PTZ00377	481	alanine aminotransferase; Provisional	100.0
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	100.0
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	100.0
PRK07309	391	aromatic amino acid aminotransferase; Validated	100.0
PRK08363	398	alanine aminotransferase; Validated	100.0
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	100.0
PRK06107	402	aspartate aminotransferase; Provisional	100.0
PRK08354	311	putative aminotransferase; Provisional	100.0
PRK07568	397	aspartate aminotransferase; Provisional	100.0
PRK05764	393	aspartate aminotransferase; Provisional	100.0
PRK06225	380	aspartate aminotransferase; Provisional	100.0
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	100.0
PRK08175	395	aminotransferase; Validated	100.0
PRK07777	387	aminotransferase; Validated	100.0
PRK09275	527	aspartate aminotransferase; Provisional	100.0
PRK06836	394	aspartate aminotransferase; Provisional	100.0
KOG0259	447	consensus Tyrosine aminotransferase [Amino acid tr	100.0
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	100.0
PLN02672	1082	methionine S-methyltransferase	100.0
PLN02231	534	alanine transaminase	100.0
PLN02368	407	alanine transaminase	100.0
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	100.0
PTZ00376	404	aspartate aminotransferase; Provisional	100.0
PRK09257	396	aromatic amino acid aminotransferase; Provisional	100.0
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	100.0
PLN02397	423	aspartate transaminase	100.0
PRK08637	388	hypothetical protein; Provisional	100.0
KOG0256	471	consensus 1-aminocyclopropane-1-carboxylate syntha	100.0
cd00609	350	AAT_like Aspartate aminotransferase family. This f	100.0
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	100.0
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	100.0
PRK10534	333	L-threonine aldolase; Provisional	100.0
PRK10874	401	cysteine sulfinate desulfinase; Provisional	100.0
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	100.0
KOG0634	472	consensus Aromatic amino acid aminotransferase and	100.0
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	100.0
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	100.0
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	100.0
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	100.0
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	100.0
PLN02721	353	threonine aldolase	100.0
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.98
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	99.98
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	99.98
PRK02948	381	cysteine desulfurase; Provisional	99.98
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	99.97
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	99.97
PRK13392	410	5-aminolevulinate synthase; Provisional	99.97
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	99.97
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	99.97
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	99.97
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	99.97
PRK07179	407	hypothetical protein; Provisional	99.97
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	99.97
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	99.97
PLN02822	481	serine palmitoyltransferase	99.97
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	99.97
PRK07049	427	methionine gamma-lyase; Validated	99.97
PRK02627	396	acetylornithine aminotransferase; Provisional	99.97
PLN02409	401	serine--glyoxylate aminotransaminase	99.96
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	99.96
PRK03244	398	argD acetylornithine aminotransferase; Provisional	99.96
PLN02483	489	serine palmitoyltransferase	99.96
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	99.96
PRK09064	407	5-aminolevulinate synthase; Validated	99.96
PLN02242	418	methionine gamma-lyase	99.96
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	99.96
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	99.96
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	99.96
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	99.96
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	99.96
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	99.96
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	99.96
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	99.96
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	99.96
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	99.96
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	99.96
PRK13393	406	5-aminolevulinate synthase; Provisional	99.95
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	99.95
PRK01278	389	argD acetylornithine transaminase protein; Provisi	99.95
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.95
PRK06234	400	methionine gamma-lyase; Provisional	99.95
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.95
PRK06460	376	hypothetical protein; Provisional	99.95
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	99.95
PRK13520	371	L-tyrosine decarboxylase; Provisional	99.95
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	99.95
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	99.94
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	99.94
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.94
PRK06767	386	methionine gamma-lyase; Provisional	99.94
PRK08247	366	cystathionine gamma-synthase; Reviewed	99.94
PRK08045	386	cystathionine gamma-synthase; Provisional	99.94
PRK04260	375	acetylornithine aminotransferase; Provisional	99.94
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	99.94
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	99.93
PRK02936	377	argD acetylornithine aminotransferase; Provisional	99.93
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	99.93
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	99.93
PRK08249	398	cystathionine gamma-synthase; Provisional	99.93
PRK07582	366	cystathionine gamma-lyase; Validated	99.93
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	99.93
PRK07505	402	hypothetical protein; Provisional	99.93
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	99.93
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.93
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.93
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	99.93
PRK14012	404	cysteine desulfurase; Provisional	99.93
PLN02651	364	cysteine desulfurase	99.93
PRK07503	403	methionine gamma-lyase; Provisional	99.93
PRK08776	405	cystathionine gamma-synthase; Provisional	99.93
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	99.92
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	99.92
PRK08861	388	cystathionine gamma-synthase; Provisional	99.92
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	99.92
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	99.92
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	99.92
PTZ00125	400	ornithine aminotransferase-like protein; Provision	99.92
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	99.92
PRK07050	394	cystathionine beta-lyase; Provisional	99.92
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	99.92
PRK07811	388	cystathionine gamma-synthase; Provisional	99.92
PRK05968	389	hypothetical protein; Provisional	99.91
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	99.91
KOG0258	475	consensus Alanine aminotransferase [Amino acid tra	99.91
PRK08064	390	cystathionine beta-lyase; Provisional	99.91
PLN02955	476	8-amino-7-oxononanoate synthase	99.91
PRK08574	385	cystathionine gamma-synthase; Provisional	99.91
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	99.91
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.9
PRK08088	425	4-aminobutyrate aminotransferase; Validated	99.9
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.9
PRK09028	394	cystathionine beta-lyase; Provisional	99.9
PRK07269	364	cystathionine gamma-synthase; Reviewed	99.9
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	99.9
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	99.9
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	99.9
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	99.9
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	99.9
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.9
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	99.89
PLN00144	382	acetylornithine transaminase	99.89
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	99.89
PRK05939	397	hypothetical protein; Provisional	99.89
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	99.89
PRK07671	377	cystathionine beta-lyase; Provisional	99.89
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	99.89
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	99.88
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	99.88
PLN02624	474	ornithine-delta-aminotransferase	99.88
TIGR01814	406	kynureninase kynureninase. This model describes ky	99.88
PRK04366	481	glycine dehydrogenase subunit 2; Validated	99.88
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.88
PLN02509	464	cystathionine beta-lyase	99.87
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	99.87
PRK09792	421	4-aminobutyrate transaminase; Provisional	99.86
PRK05967	395	cystathionine beta-lyase; Provisional	99.86
PRK13034	416	serine hydroxymethyltransferase; Reviewed	99.86
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.86
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	99.86
PRK04612	408	argD acetylornithine transaminase protein; Provisi	99.85
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	99.85
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	99.85
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	99.85
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	99.85
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	99.84
PRK08114	395	cystathionine beta-lyase; Provisional	99.84
KOG2862	385	consensus Alanine-glyoxylate aminotransferase AGT1	99.84
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	99.84
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	99.84
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	99.84
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	99.84
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.84
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	99.83
PRK03080	378	phosphoserine aminotransferase; Provisional	99.83
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	99.83
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	99.83
PTZ00094	452	serine hydroxymethyltransferase; Provisional	99.82
KOG1549	428	consensus Cysteine desulfurase NFS1 [Amino acid tr	99.82
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	99.82
PLN02724	805	Molybdenum cofactor sulfurase	99.82
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	99.81
KOG1368	384	consensus Threonine aldolase [Amino acid transport	99.81
KOG1412	410	consensus Aspartate aminotransferase/Glutamic oxal	99.81
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	99.81
KOG1411	427	consensus Aspartate aminotransferase/Glutamic oxal	99.8
PRK13580	493	serine hydroxymethyltransferase; Provisional	99.8
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	99.8
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.8
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	99.8
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	99.8
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	99.79
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	99.79
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	99.79
KOG1360	570	consensus 5-aminolevulinate synthase [Coenzyme tra	99.79
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	99.79
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	99.78
PRK06541	460	hypothetical protein; Provisional	99.78
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	99.78
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	99.77
PRK06434	384	cystathionine gamma-lyase; Validated	99.77
PRK03715	395	argD acetylornithine transaminase protein; Provisi	99.77
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.77
KOG1359	417	consensus Glycine C-acetyltransferase/2-amino-3-ke	99.77
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	99.76
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	99.76
PRK02769	380	histidine decarboxylase; Provisional	99.75
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	99.75
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	99.75
PLN03226	475	serine hydroxymethyltransferase; Provisional	99.75
PLN02760	504	4-aminobutyrate:pyruvate transaminase	99.74
PLN03032	374	serine decarboxylase; Provisional	99.74
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	99.74
PRK07678	451	aminotransferase; Validated	99.74
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	99.73
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	99.73
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	99.73
PLN02271	586	serine hydroxymethyltransferase	99.73
PRK06105	460	aminotransferase; Provisional	99.72
PRK06062	451	hypothetical protein; Provisional	99.72
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	99.72
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	99.71
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	99.71
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	99.71
PF04864	363	Alliinase_C: Allinase; InterPro: IPR006948 Allicin	99.71
KOG0053	409	consensus Cystathionine beta-lyases/cystathionine	99.71
PRK06149	972	hypothetical protein; Provisional	99.7
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	99.7
PRK07482	461	hypothetical protein; Provisional	99.7
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	99.7
PRK05965	459	hypothetical protein; Provisional	99.7
PRK07046	453	aminotransferase; Validated	99.7
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	99.69
PRK04311	464	selenocysteine synthase; Provisional	99.69
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	99.69
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	99.69
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	99.69
PRK12403	460	putative aminotransferase; Provisional	99.69
PLN02452	365	phosphoserine transaminase	99.69
PRK07480	456	putative aminotransferase; Validated	99.69
PRK07483	443	hypothetical protein; Provisional	99.69
PRK06148	1013	hypothetical protein; Provisional	99.68
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	99.68
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	99.67
PRK07036	466	hypothetical protein; Provisional	99.67
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	99.67
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	99.66
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	99.66
PRK07481	449	hypothetical protein; Provisional	99.66
KOG1357	519	consensus Serine palmitoyltransferase [Posttransla	99.65
PRK13237	460	tyrosine phenol-lyase; Provisional	99.65
PRK06917	447	hypothetical protein; Provisional	99.65
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	99.65
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	99.65
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	99.64
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	99.64
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	99.64
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	99.63
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	99.62
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	99.61
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	99.61
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	99.6
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	99.59
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	99.58
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	99.57
PLN02263	470	serine decarboxylase	99.57
PRK15029	755	arginine decarboxylase; Provisional	99.57
PRK12462	364	phosphoserine aminotransferase; Provisional	99.57
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.56
PRK05367	954	glycine dehydrogenase; Provisional	99.55
KOG1404	442	consensus Alanine-glyoxylate aminotransferase AGT2	99.54
PRK13578	720	ornithine decarboxylase; Provisional	99.53
PLN02880	490	tyrosine decarboxylase	99.53
PRK15399	713	lysine decarboxylase LdcC; Provisional	99.52
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	99.52
PRK12566	954	glycine dehydrogenase; Provisional	99.52
PRK08297	443	L-lysine aminotransferase; Provisional	99.51
PRK15400	714	lysine decarboxylase CadA; Provisional	99.5
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	99.49
PLN02590	539	probable tyrosine decarboxylase	99.48
PRK05367	954	glycine dehydrogenase; Provisional	99.48
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	99.45
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	99.44
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.42
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	99.42
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	99.41
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	99.41
KOG1402	427	consensus Ornithine aminotransferase [Amino acid t	99.36
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	99.35
KOG1401	433	consensus Acetylornithine aminotransferase [Amino	99.33
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	99.2
KOG1358	467	consensus Serine palmitoyltransferase [Posttransla	99.18
KOG2467	477	consensus Glycine/serine hydroxymethyltransferase	99.17
COG3844	407	Kynureninase [Amino acid transport and metabolism]	99.16
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.16
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	99.14
COG4100	416	Cystathionine beta-lyase family protein involved i	98.99
PLN02994	153	1-aminocyclopropane-1-carboxylate synthase	98.96
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	98.89
KOG1383	491	consensus Glutamate decarboxylase/sphingosine phos	98.83
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	98.82
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	98.82
KOG1403	452	consensus Predicted alanine-glyoxylate aminotransf	98.81
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	98.79
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	98.74
COG1932	365	SerC Phosphoserine aminotransferase [Coenzyme meta	98.65
COG3033	471	TnaA Tryptophanase [Amino acid transport and metab	98.56
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	98.41
KOG0629	510	consensus Glutamate decarboxylase and related prot	98.39
PRK12566	954	glycine dehydrogenase; Provisional	98.3
KOG1405	484	consensus 4-aminobutyrate aminotransferase [Amino	98.05
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	97.78
KOG3846	465	consensus L-kynurenine hydrolase [Amino acid trans	97.71
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	97.6
KOG0628	511	consensus Aromatic-L-amino-acid/L-histidine decarb	97.51
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	96.89
KOG2790	370	consensus Phosphoserine aminotransferase [Coenzyme	96.38
KOG3843	432	consensus Predicted serine hydroxymethyltransferas	91.92
PLN02672	1082	methionine S-methyltransferase	86.66
COG2102	223	Predicted ATPases of PP-loop superfamily [General	80.16

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2e-57  Score=443.88  Aligned_cols=363  Identities=83%  Similarity=1.322  Sum_probs=326.9

Q ss_pred             cCCCCchHHHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHH
Q 014594           59 RRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAAL  138 (422)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~l  138 (422)
                      ..++..+++++.+.++.+|.+...+...+++++..+.++|+|+.|+|+++++|.+.+++.+....+.||+++..+||+++
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~n~~p~~~~~~v~~a~~~~~~~~~Yp~~~~~~lr~~i   95 (380)
T PLN03026         16 QSTSGDSFIRKHILQLAPYQPILPFEVLSAQLGRKPEDIVKLDANENPYGPPPEVLEALGNMKFPYVYPDPESRRLRAAL   95 (380)
T ss_pred             ccccHhHHhhHHhhcCCCCCCCCChHHHHHHhCCCccceEEccCCCCCCCCCHHHHHHHHhhHhhccCCCCCHHHHHHHH
Confidence            34566778899999999997777788888888877788999999999999999999998764333568988889999999


Q ss_pred             HHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCC
Q 014594          139 AKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREK  218 (422)
Q Consensus       139 a~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~  218 (422)
                      ++++++++++|++|+|+++++..++.+++++||+|+++.|+|..|...++..|++++.++.++++.+|++++++.+..++
T Consensus        96 a~~~~~~~~~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~  175 (380)
T PLN03026         96 AEDSGLESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETHK  175 (380)
T ss_pred             HHHhCcChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhccC
Confidence            99999999999999999999999999999999999999999999999999999999999987778999999999984478


Q ss_pred             CeEEEEeCCCCccCcCCCHHHHHHHHcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecC
Q 014594          219 PKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (422)
Q Consensus       219 ~~~i~l~~p~NPtG~~~~~e~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~  298 (422)
                      +++|++||||||||.+++.+++.+|++..+++|+||+|.+|.+.++.......++++++++||||.||++|+|+||++++
T Consensus       176 ~~~v~l~~P~NPTG~~~~~~~l~~l~~~~~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~  255 (380)
T PLN03026        176 PKLLFLTSPNNPDGSIISDDDLLKILELPILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFP  255 (380)
T ss_pred             CcEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecC
Confidence            99999999999999999999999999877899999999999865555555556789999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHH
Q 014594          299 LSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKK  377 (422)
Q Consensus       299 ~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~  377 (422)
                      +++++.+.+...+|+++.++|.++.++|++.+|++ .++.++++|+++.+.|+++++..+.|++++|+|++++++.++.+
T Consensus       256 ~~~i~~l~~~~~~~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~  335 (380)
T PLN03026        256 LSIIEYLWRAKQPYNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLEPYPSDANFILCRVTSGRDAKK  335 (380)
T ss_pred             HHHHHHHHHhcCCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCeECCCCCeEEEEECCCCCCHHH
Confidence            99999999888889999999999999999888888 88999999999999999988766788999999999976668899


Q ss_pred             HHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          378 LKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       378 ~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +.+.|.++||.++++...+.++++||+++.++++++|.++++++
T Consensus       336 ~~~~l~~~gI~v~~~~~~~~~~~lRis~~~~~~~~~l~~al~~~  379 (380)
T PLN03026        336 LKEDLAKMGVMVRHYNSKELKGYIRVSVGKPEHTDALMEALKQL  379 (380)
T ss_pred             HHHHHHHCCeEEEECCCCCCCCEEEEecCCHHHHHHHHHHHHHh
Confidence            99999999999999876566789999999988899999999876

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.8e-57  Score=434.31  Aligned_cols=341  Identities=47%  Similarity=0.755  Sum_probs=308.9

Q ss_pred             HHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcC-CC
Q 014594           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSG-LE  145 (422)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~-~~  145 (422)
                      ++.++++.+|+++      +++.|.+  ++++|++|+||+++++.+.+++.+ ....++||++...+++++++++++ ++
T Consensus         3 ~~~i~~l~~y~~~------~~~~g~~--~~i~LssNenP~gp~~~~~~~~~~~~~~~~rYPd~~~~~l~~a~a~~~~~~~   74 (356)
T COG0079           3 RPLVRDLPPYVPG------ARQYGLP--GIIKLSSNENPYGPPPKVIEAIRAALDKLNRYPDPDYRELRAALAEYYGVVD   74 (356)
T ss_pred             chhhhhccCCCCc------ccccCCc--cceeecCCCCCCCCCHHHHHHHHHHHHhhccCCCCcHHHHHHHHHHHhCCCC
Confidence            4567778888653      3334443  689999999999999999988876 445589999999999999999999 88


Q ss_pred             CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEe
Q 014594          146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT  225 (422)
Q Consensus       146 ~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~  225 (422)
                      +++|++++|++++|..++++++.+||+|+++.|+|..|...++..|++++.++..+ |.+|++.+.+.+. .++++|++|
T Consensus        75 ~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~~-~~~~lv~i~  152 (356)
T COG0079          75 PENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE-FRLDLDAILAAIR-DKTKLVFLC  152 (356)
T ss_pred             cceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc-cccCHHHHHHhhh-cCCCEEEEe
Confidence            89999999999999999999999999999999999999999999999999999877 9999999999998 489999999


Q ss_pred             CCCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHH
Q 014594          226 SPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII  302 (422)
Q Consensus       226 ~p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~  302 (422)
                      |||||||..++.+++.++++.   +.+||+||+|.+|+. .+....+..++|+++++||||+||++|+|+||++++++++
T Consensus       153 nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~-~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i  231 (356)
T COG0079         153 NPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSP-ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPELI  231 (356)
T ss_pred             CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCC-chhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHHH
Confidence            999999999999999999986   789999999999997 5555555567889999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCCCHHHHHH
Q 014594          303 EYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKD  380 (422)
Q Consensus       303 ~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~~~~~~~~  380 (422)
                      +.+.+.+.+|++|.+++.++.++|++.++++ .++.+.+.|+++.+.|+.++ +. +.|+.+||++++++... +..+.+
T Consensus       232 ~~l~~vr~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~aNFvlv~~~~~~-~~~l~~  309 (356)
T COG0079         232 AALNKVRPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG-LFGVFPSQANFVLVRVPDAE-AAALAE  309 (356)
T ss_pred             HHHHHhcCCCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcEEEEECCCcc-HHHHHH
Confidence            9999999999999999999999999999988 99999999999999999998 55 88999999999998534 668999


Q ss_pred             HHHhCCcEEEeCCC-CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          381 DLAKMGVMIRHYNN-KELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       381 ~L~~~gI~v~~~~~-~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .|.++||.+|.+.. +..++|+||++++++++++|.++++.+
T Consensus       310 ~L~~~giivR~~~~~~~~~~~lRitvgt~een~~ll~AL~~~  351 (356)
T COG0079         310 ALLKKGILVRDCSSVGLLPGYLRITVGTPEENDRLLAALREV  351 (356)
T ss_pred             HHHHCCEEEEeCCCCCCCCCeEEEEeCCHHHHHHHHHHHHHH
Confidence            99999999999876 456789999999999999999999864

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=2e-53  Score=413.12  Aligned_cols=341  Identities=32%  Similarity=0.535  Sum_probs=295.6

Q ss_pred             HHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHcCCCC
Q 014594           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLES  146 (422)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~~~~~~lr~~la~~~~~~~  146 (422)
                      +..+..+.+|.+........+.++  ..++|+|+.|+|++++++.+++++.+. .....||+.|..+||+++++++++++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~nen~~~~~~~v~~a~~~~~~~~~~Yp~~g~~~Lr~aia~~~~~~~   81 (366)
T PRK01533          4 KDQLSSLQPYKPGKSPEQMKEVYG--DHSFVKLASNENPFGCSPRVLDELQKSWLDHALYPDGGATTLRQTIANKLHVKM   81 (366)
T ss_pred             hhhhhcCCCCCCCCChHHHHHhcC--CCceEEeCCCCCCCCCCHHHHHHHHHHHHhcCcCCCCCHHHHHHHHHHHhCCCc
Confidence            345566666655544444444443  357899999999999999999998763 33356898899999999999999999


Q ss_pred             CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeC
Q 014594          147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS  226 (422)
Q Consensus       147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~  226 (422)
                      ++|++|+|+++++.+++++++++||+|+++.|+|..|...++..|++++.++.+ ++.+|++.+++.++ ++++++++||
T Consensus        82 ~~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~-~~~~d~~~l~~~~~-~~~~~v~i~~  159 (366)
T PRK01533         82 EQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN-NGVYDLDEISSVVD-NDTKIVWICN  159 (366)
T ss_pred             ceEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC-CCCcCHHHHHHHhC-cCCcEEEEeC
Confidence            999999999999999999999999999999999999999999999999999985 45799999999986 6899999999


Q ss_pred             CCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCC---chhhhhhcCCcEEEEccChhhhccccccceeeecCHH
Q 014594          227 PNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (422)
Q Consensus       227 p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~---~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~  300 (422)
                      ||||||.+++.+++.+|++.   +.++|+||+|.+|.+..   +....+..++++++++||||.||++|+|+||++++++
T Consensus       160 P~NPTG~~~~~~~l~~l~~~~~~~~~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~  239 (366)
T PRK01533        160 PNNPTGTYVNDRKLTQFIEGISENTLIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEE  239 (366)
T ss_pred             CCCCCCCCcCHHHHHHHHHhCCCCCEEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHH
Confidence            99999999999999999875   56788999999887543   2334444568999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHH
Q 014594          301 IIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLK  379 (422)
Q Consensus       301 ~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~  379 (422)
                      +++.+.+...+|++|.++|.++.++|++++|.+ .++.++++++++.+.|+.++ +.+.+++++|+|++++   ++.++.
T Consensus       240 ~~~~l~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~g-~~~~~~~~nf~~~~~~---~~~~~~  315 (366)
T PRK01533        240 LIEKLNVVRLPFNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKENE-IPFYQSQTNFIFLPVE---NGGEIY  315 (366)
T ss_pred             HHHHHHHhcCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CccCCCcCcEEEEeCC---CHHHHH
Confidence            999999888889999999999999999888888 88888899999999998886 5567889999999986   567899


Q ss_pred             HHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          380 DDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       380 ~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +.|+++||.|+++     ++++||++++.+++++|.++|+.+
T Consensus       316 ~~l~~~GI~Vr~~-----~~~iRis~~~~~~~~~l~~al~~~  352 (366)
T PRK01533        316 EACAHAGFIIRPF-----PNGVRITVGTREQNEGVISVLQQH  352 (366)
T ss_pred             HHHHHCCcEEccC-----CCceEEeCCCHHHHHHHHHHHHHH
Confidence            9999999999984     489999999999999999999764

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=6.8e-53  Score=409.84  Aligned_cols=324  Identities=29%  Similarity=0.456  Sum_probs=282.2

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHc----C--CCCCC-EEEeCCHHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDS----G--LESDH-ILVGCGADELIDLIMR  164 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~--~~y~~~~~~~lr~~la~~~----~--~~~~~-i~~~~G~~~al~~~~~  164 (422)
                      .++|+|+.|++++++|+.+.+++.+ +..+  ++||..|..+||+++++++    +  +++++ |++|+|+++++..++.
T Consensus        28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~  107 (393)
T COG0436          28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFL  107 (393)
T ss_pred             CCEEEeCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHH
Confidence            6899999999999999999988876 4333  3447779999999999986    3  45665 9999999999999999


Q ss_pred             HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC---CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (422)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~  241 (422)
                      ++++|||+|++++|.|+.|....+..|++++.++..   .+|.+|++.++++++ +++|+|++|+||||||.+++.++++
T Consensus       108 a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~-~ktk~i~ln~P~NPTGav~~~~~l~  186 (393)
T COG0436         108 ALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAIT-PKTKAIILNSPNNPTGAVYSKEELK  186 (393)
T ss_pred             HhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcC-ccceEEEEeCCCCCcCcCCCHHHHH
Confidence            999999999999999999999999999999999953   489999999999998 5999999999999999999999999


Q ss_pred             HHHcC----CCeEEEccCCccccCCCc-hhhhh--h-cCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcCC-
Q 014594          242 KILEM----PILVVLDEAYTEFSGLES-RMEWV--K-KHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP-  311 (422)
Q Consensus       242 ~i~~~----~~~li~Deay~~~~~~~~-~~~~~--~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~-  311 (422)
                      +|++.    +++||.||+|.++.+++. ..+..  . ..+++|+++||||.|+++|||+||++++ +++++.+.+.++. 
T Consensus       187 ~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~~~~~~~  266 (393)
T COG0436         187 AIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEELIAALRKLKSYL  266 (393)
T ss_pred             HHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChHHHHHHHHHHHHhc
Confidence            99885    999999999999998763 33222  2 2478999999999999999999999999 8888888766554 


Q ss_pred             -CCCcHHHHHHHHHHccCC---hHHH-HHHHHHHHHHHHHHHHccCCCCc-cc-CCCceEEEEEeCCCCCHHHHHHHHH-
Q 014594          312 -YNVSVAAEVAACAALQNP---IYLE-VKEALIKERERLFKLLKDVPFLN-PY-PSYSNFILCEVTSGMDAKKLKDDLA-  383 (422)
Q Consensus       312 -~~~~~~~~~aa~~~L~~~---~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~-p~~~~f~~~~~~~~~~~~~~~~~L~-  383 (422)
                       ++.+.+.|.++.++|+.+   ++.+ +++.++++|+.+.+.|.+++++. .. |.+++|+|++++...|+.+|+..|+ 
T Consensus       267 ~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~~d~~~f~~~Ll~  346 (393)
T COG0436         267 TSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPELLDSEEFAKKLLE  346 (393)
T ss_pred             ccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCCCCHHHHHHHHHH
Confidence             588999999999999986   3566 77899999999999999987444 45 6799999999986679999999988 


Q ss_pred             hCCcEEEeCCCCCC---CCeEEEEecChhhHHHHHHHHhhh
Q 014594          384 KMGVMIRHYNNKEL---KGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       384 ~~gI~v~~~~~~~~---~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ++||.|.||..++.   +++|||+++...  +.++++++++
T Consensus       347 ~~gV~v~PG~~Fg~~~g~~~vRis~~~~~--~~l~~a~~rl  385 (393)
T COG0436         347 EAGVAVVPGSGFGEPPGEGYVRLSLATSE--ETLEEALRRL  385 (393)
T ss_pred             hCCEEEecccccCCCCCCCeEEEEEecCH--HHHHHHHHHH
Confidence            77999999998654   489999999876  6788888876

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=5.7e-52  Score=401.54  Aligned_cols=336  Identities=31%  Similarity=0.542  Sum_probs=291.4

Q ss_pred             hHHHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHcCC
Q 014594           65 SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGL  144 (422)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~la~~~~~  144 (422)
                      ...+..+..+.+|.+...       .  .....++|+.|+||+++++.+     ......+||++...+|++++++++|+
T Consensus         7 ~~~~~~~~~~~~~~~~~~-------~--~~~~~~~l~~Nenp~~~~~~~-----~~~~~~~Yp~~~~~~l~~~~a~~~g~   72 (351)
T PRK01688          7 DLARENVRALTPYQSARR-------L--GGNGDVWLNANEYPTAVEFQL-----TQQTLNRYPECQPKAVIENYAAYAGV   72 (351)
T ss_pred             HHhhHHhhcCCCCCCCCc-------c--CCCCceEecCCCCCCCCChhh-----cccccccCCCCChHHHHHHHHHHhCC
Confidence            455677888888754321       1  123459999999999988754     22234779999889999999999999


Q ss_pred             CCCCEEEeCCHHHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEE
Q 014594          145 ESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF  223 (422)
Q Consensus       145 ~~~~i~~~~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~  223 (422)
                      ++++|++|+|+++++.+++++++++| |.|+++.|+|..|...++..|++++.++.++++.+|++++++++  .++++|+
T Consensus        73 ~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~~--~~~~lv~  150 (351)
T PRK01688         73 KPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQLDLPAIADNL--DGVKVVY  150 (351)
T ss_pred             CHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHHhc--cCCcEEE
Confidence            99999999999999999999999997 89999999999999999999999999998777899999999987  3799999


Q ss_pred             EeCCCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHH
Q 014594          224 LTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (422)
Q Consensus       224 l~~p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~  300 (422)
                      +||||||||.+++.+++++|++.   ++++|+||+|.+|....+....+..++++++++||||.||++|+|+||++++++
T Consensus       151 l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~  230 (351)
T PRK01688        151 VCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEE  230 (351)
T ss_pred             EeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHH
Confidence            99999999999999999999875   689999999999985555555566678999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCC-cccCCCceEEEEEeCCCCCHH
Q 014594          301 IIEYLWRAKQPYNVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFL-NPYPSYSNFILCEVTSGMDAK  376 (422)
Q Consensus       301 ~~~~l~~~~~~~~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~-~~~p~~~~f~~~~~~~~~~~~  376 (422)
                      +++.+.+...+|+++.+.+.++.++|.+.  ++++ .++.++++|+++.+.|++++++ .+.|++++|+|++++   +++
T Consensus       231 ~i~~l~~~~~~~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~---~~~  307 (351)
T PRK01688        231 VINLLLKVIAPYPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT---ASS  307 (351)
T ss_pred             HHHHHHhccCCCCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC---CHH
Confidence            99999998889999999999999999864  5666 7888899999999999998665 378999999999985   578


Q ss_pred             HHHHHHHhCCcEEEeCCC-CCCCCeEEEEecChhhHHHHHHHHh
Q 014594          377 KLKDDLAKMGVMIRHYNN-KELKGYVRVSVGKPEHTDALMECLM  419 (422)
Q Consensus       377 ~~~~~L~~~gI~v~~~~~-~~~~~~iRis~~~~~~~~~l~~al~  419 (422)
                      ++.+.|+++||.++.+.. ++.++|+||++++.++++.|.++|+
T Consensus       308 ~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~~~~e~~~l~~al~  351 (351)
T PRK01688        308 AVFKSLWDQGIILRDQNKQPGLSNCLRITIGTREECQRVIDALR  351 (351)
T ss_pred             HHHHHHHHCCeEEEECCCcCCCCCeEEEeCCCHHHHHHHHHhhC
Confidence            999999999999998765 4667899999999999999988874

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.8e-51  Score=399.98  Aligned_cols=346  Identities=40%  Similarity=0.639  Sum_probs=301.0

Q ss_pred             HHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCC
Q 014594           69 SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESD  147 (422)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~  147 (422)
                      +++....+|.+...+...+.+++.+  ++++|+.|++++++++.+.+++.+ +.....||+.+..++|++++++++++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~~p~~g~~~lr~~ia~~~~~~~~   82 (359)
T PRK03158          5 EQLNQLSAYQPGKSIEEVKREYGLE--KIVKLASNENPYGPSPKVKEAIAAHLDELALYPDGYAPELRTKVAKHLGVDEE   82 (359)
T ss_pred             hhhhccCCCCCCCCHHHHHHhcCCC--ceEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHhCCCHH
Confidence            3455566665555555566666653  789999999999999999999876 3333456888899999999999999999


Q ss_pred             CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCC
Q 014594          148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP  227 (422)
Q Consensus       148 ~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p  227 (422)
                      +|++|+|+++++..++++++++||.|+++.|+|+.|...+...|++++.++.+ ++++|++.+++.+. +++++++++||
T Consensus        83 ~i~~t~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~d~~~l~~~~~-~~~~~v~i~~p  160 (359)
T PRK03158         83 QLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK-DGGHDLEAMLKAID-EQTKIVWICNP  160 (359)
T ss_pred             HEEECCCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC-CCCcCHHHHHHhcC-CCCCEEEEeCC
Confidence            99999999999999999999999999999999999999999999999999976 67899999999886 68999999999


Q ss_pred             CCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCC---chhhhhhcCCcEEEEccChhhhccccccceeeecCHHH
Q 014594          228 NNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (422)
Q Consensus       228 ~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~---~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~  301 (422)
                      |||||.+++.+++.++++.   ++++|+||+|.+|.+++   ......+..+++++++||||.||++|+|+||+++++++
T Consensus       161 ~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~  240 (359)
T PRK03158        161 NNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEEL  240 (359)
T ss_pred             CCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHHH
Confidence            9999999999999999975   89999999999987543   23344456789999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHH
Q 014594          302 IEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD  380 (422)
Q Consensus       302 ~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~  380 (422)
                      ++.+.+...+++.|.++|.++.++|++.+|.+ .++.++++++.+.+.|++++ +.+.|++|+|+|++++  .++.++.+
T Consensus       241 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~g~~i~~~~~--~~~~~~~~  317 (359)
T PRK03158        241 IEKLNIARPPFNTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEYG-LFYYPSQTNFIFVDTG--RDANELFE  317 (359)
T ss_pred             HHHHHHhcCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeeCCCcCcEEEEECC--CCHHHHHH
Confidence            99998888889999999999999999888888 78888999999999998885 4556788999999984  46889999


Q ss_pred             HHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          381 DLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       381 ~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .|.++||.++++..++.++++||+++.+++++++.++|+++
T Consensus       318 ~l~~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~l~~al~~~  358 (359)
T PRK03158        318 ALLKKGYIVRSGAALGFPTGVRITIGLKEQNDKIIELLKEL  358 (359)
T ss_pred             HHHHCCeEEeeCCCCCCCCeEEEecCCHHHHHHHHHHHHHh
Confidence            99999999999887766789999999999999999999875

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=6.4e-51  Score=395.68  Aligned_cols=341  Identities=33%  Similarity=0.507  Sum_probs=291.4

Q ss_pred             HhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCC
Q 014594           70 HLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDH  148 (422)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~  148 (422)
                      ++....+|.++.....++++++..+.++++|+.|+|+++++|.+.+++.+ ......||+.+..+||+++++++++++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~   84 (357)
T PRK14809          5 DLSDHVAYRAGRGIEEVARELGLDPDDLVKLSSNENPHGPSPAAVEAIREAAERVHSYPKASHADLTAALADRWDVSPEQ   84 (357)
T ss_pred             hhhcCCCcCCCCCHHHHHHHhCCCccceeEecCCCCCCCCCHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHhCCCcce
Confidence            34445555455556667788877777899999999999999999988876 33346788888999999999999999999


Q ss_pred             EEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeC
Q 014594          149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTS  226 (422)
Q Consensus       149 i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~  226 (422)
                      |++|+|+++++.+++++++++||.|++++|+|..|...+...|++++.++.+  +++.+|++++++..  .++|+|++||
T Consensus        85 I~it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~--~~~k~i~l~~  162 (357)
T PRK14809         85 VWLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY--DGERIVYLTS  162 (357)
T ss_pred             EEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh--cCCcEEEEeC
Confidence            9999999999999999999999999999999998888888899999888853  46778888887765  3689999999


Q ss_pred             CCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHH
Q 014594          227 PNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (422)
Q Consensus       227 p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~  303 (422)
                      ||||||.+++.+++.+|++.   ++++|+||+|.+|.+.++........+++++++||||.||++|+|+||+++++++++
T Consensus       163 p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~  242 (357)
T PRK14809        163 PHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWAD  242 (357)
T ss_pred             CCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHHHHH
Confidence            99999999999999999875   789999999999987555444455568999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHH
Q 014594          304 YLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDL  382 (422)
Q Consensus       304 ~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L  382 (422)
                      .+.+...+++.+.++|.++..+|++.+|++ .++.++++++.+.+.|+...    .|++|+|+|++++   +.+++.+.|
T Consensus       243 ~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~g~f~~~~~~---~~~~~~~~l  315 (357)
T PRK14809        243 AYARVNTPFAASELACRAGLAALDDDEHVERTVETARWAREYIREELDAPT----WESAGNFVLAEVG---DASAVAEAA  315 (357)
T ss_pred             HHHHhCCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCcc----CCCCCCEEEEECC---CHHHHHHHH
Confidence            999888788999999999999998888888 88899999999999997642    3688999999985   578899999


Q ss_pred             HhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHh
Q 014594          383 AKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLM  419 (422)
Q Consensus       383 ~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~  419 (422)
                      .++||.++++..++.++++||+++.++++++..++|+
T Consensus       316 ~~~gv~v~~g~~f~~~~~iRls~~~~~~~~~~l~~L~  352 (357)
T PRK14809        316 QERGVIVRDCTSFGLPECIRITCGTREETERAVEVLN  352 (357)
T ss_pred             HHCCEEEEECccCCCCCeEEEecCCHHHHHHHHHHHH
Confidence            8999999999877667899999987655444444444

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.3e-50  Score=391.64  Aligned_cols=350  Identities=36%  Similarity=0.631  Sum_probs=300.5

Q ss_pred             HHHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHcCC
Q 014594           66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGL  144 (422)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~~~~~~lr~~la~~~~~  144 (422)
                      .++..+..+.+|.+...+...+..++  +.++|+|+.|+|++++++.+.+++.+. .....||++...+||+++++++++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~~~~~~~~~~~~~~al~~~~~~~~~Y~~~~g~~lr~~ia~~~~~   86 (371)
T PRK05166          9 LARAEVRPLPPYNAGLTIEEVRARYG--VPRIAKLGSNENPLGPSPAVRRAFADIAELLRLYPDPQGRALREAIAARTGV   86 (371)
T ss_pred             hhhHHHhcCCCCCCCCCHHHHHHhcC--CcceEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHhCc
Confidence            34556667777766666666665554  457899999999999999999988763 334678877546999999999999


Q ss_pred             CCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEE
Q 014594          145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL  224 (422)
Q Consensus       145 ~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l  224 (422)
                      ++++|++|+|+++++..++.+++++||.|+++.|+|..+...++..|++++.++.+.++++|++++++.++ +++|++++
T Consensus        87 ~~~~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~-~~~~~v~l  165 (371)
T PRK05166         87 PADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVA-RAPRMLMF  165 (371)
T ss_pred             CHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhh-cCCCEEEE
Confidence            99999999999999999999999999999999999999999999999999999987778999999999986 58899999


Q ss_pred             eCCCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCC---chhhhhh-cCCcEEEEccChhhhccccccceeeec
Q 014594          225 TSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE---SRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (422)
Q Consensus       225 ~~p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~---~~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~  297 (422)
                      +|||||||.+++.+++.+|++.   ++++|+||+|.+|.++.   +...... ..+++++++||||.||++|+|+||+++
T Consensus       166 ~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~  245 (371)
T PRK05166        166 SNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLV  245 (371)
T ss_pred             eCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeec
Confidence            9999999999999999999875   78999999999988543   2222232 346899999999999999999999775


Q ss_pred             -CHHHHHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCH
Q 014594          298 -PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDA  375 (422)
Q Consensus       298 -~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~  375 (422)
                       ++++++.+.+....++++.+.|.++.++|.+.+|++ .++.++++++.+.+.|++++ +.+.|++|+|+|++++  .++
T Consensus       246 ~~~~l~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~p~~g~fl~~~~~--~~~  322 (371)
T PRK05166        246 SDPELVGLLDRVRTPFNVNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEMG-YRIAPSRANFLFFDAR--RPA  322 (371)
T ss_pred             CCHHHHHHHHHhccCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCc-CeeCCCcCCEEEEeCC--CCH
Confidence             788989888877788999999999999998888888 88899999999999999886 4567888999999975  367


Q ss_pred             HHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          376 KKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       376 ~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .++.+.|.++||.++++..++..+++||+++.++++++|.++++++
T Consensus       323 ~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~~~~~~~~l~~~l~~i  368 (371)
T PRK05166        323 SAVAEALLRQGVIVKPWKQPGFETFIRVSIGSPEENDHFVAALDKV  368 (371)
T ss_pred             HHHHHHHHHCCeEEecCCCCCCCCeEEEEcCCHHHHHHHHHHHHHH
Confidence            8999999999999999876666899999999988899999999875

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-49  Score=387.33  Aligned_cols=338  Identities=34%  Similarity=0.530  Sum_probs=286.8

Q ss_pred             HHHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHcCCC
Q 014594           66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE  145 (422)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~la~~~~~~  145 (422)
                      .+++.+.++.+|.+...         ......++++.|++++++++...      .....||+++..+||++++++++++
T Consensus        11 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~ne~~~~~~~~~~------~~~~~Y~~~~~~~lr~~ia~~~~~~   75 (364)
T PRK04781         11 LVREDLRAFAGYSSARS---------SALQGDVWLNANESAWANPADPD------ASTRRYPDPQPPGLRSALAALYGCA   75 (364)
T ss_pred             HhhHHhhcCCCCCCCCc---------cccCCCEEeeCCCCCCCCChhhc------chhccCCCCCHHHHHHHHHHHhCcC
Confidence            34566666666633211         01124689999999998876421      1236788888899999999999999


Q ss_pred             CCCEEEeCCHHHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEecCC---CCCCCCHHHHHHHhhcCCCeE
Q 014594          146 SDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKC  221 (422)
Q Consensus       146 ~~~i~~~~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~  221 (422)
                      +++|++|+|+++++.+++.+++.+| |.|+++.|+|..|...++..|++++.++.+   +++.+|++++++.+.++++++
T Consensus        76 ~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~l  155 (364)
T PRK04781         76 PEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKL  155 (364)
T ss_pred             hHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeE
Confidence            9999999999999999999999999 799999999999999889999999999963   346689999877654478999


Q ss_pred             EEEeCCCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecC
Q 014594          222 IFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (422)
Q Consensus       222 i~l~~p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~  298 (422)
                      |+++|||||||.+++.+++.++++.   ++++|+||+|.+|.+..+.....+..+++++++||||.||++|+|+||++++
T Consensus       156 v~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~  235 (364)
T PRK04781        156 VFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSKAHALAAARIGSLIAN  235 (364)
T ss_pred             EEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhhCCCEEEEecChhhcccccceeeeeeCC
Confidence            9999999999999999999999875   7899999999999865555555566789999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCcHHHHHHHHHHccCCh--HHH-HHHHHHHHHHHHHHHHccCCCC-cccCCCceEEEEEeCCCCC
Q 014594          299 LSIIEYLWRAKQPYNVSVAAEVAACAALQNPI--YLE-VKEALIKERERLFKLLKDVPFL-NPYPSYSNFILCEVTSGMD  374 (422)
Q Consensus       299 ~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~--~~~-~~~~~~~~~~~l~~~L~~~~~~-~~~p~~~~f~~~~~~~~~~  374 (422)
                      +++++.+.+...+++++.+.|.++..+|+++.  +.. .++.++++|+.+.+.|++++.+ .+.|++|+|+|++++   +
T Consensus       236 ~~l~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~---~  312 (364)
T PRK04781        236 AELIAVLRRCQAPYPVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD---D  312 (364)
T ss_pred             HHHHHHHHhccCCCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC---C
Confidence            99999999998899999999999999998863  444 6667899999999999998544 367899999999996   5


Q ss_pred             HHHHHHHHHhCCcEEEeCCC-CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          375 AKKLKDDLAKMGVMIRHYNN-KELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       375 ~~~~~~~L~~~gI~v~~~~~-~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .+++.+.|.++||.|+++.. ++.++|+||+++.++++++|.++++.+
T Consensus       313 ~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris~~~~~~~~~l~~al~~~  360 (364)
T PRK04781        313 AEAAFQALLAAGVVVRDQRAAPRLSDALRITLGTPEQNDRVLAALQRT  360 (364)
T ss_pred             HHHHHHHHHHCCeEEeeCCCCCCCCCeEEEeCCCHHHHHHHHHHHHHH
Confidence            78899999999999999875 455789999999999999999999875

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=100.00  E-value=1.3e-49  Score=386.89  Aligned_cols=334  Identities=31%  Similarity=0.447  Sum_probs=284.0

Q ss_pred             hHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           83 FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      ....+...+.+..++++|+.|+|++++++.+.+++.+ +.....||+++..+||+++++++++++++|++|+|+++++.+
T Consensus        10 ~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~a~~~~~~~~~~Y~~~~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~   89 (360)
T PRK07392         10 LAWAAAIAGCPPDAILDFSASINPLGPPESVIAAIQSALSALRHYPDPDYRELRLALAQHHQLPPEWILPGNGAAELLTW   89 (360)
T ss_pred             HHHHHHHcCCCcccEEEeCCcCCCCCCCHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHhCcChhhEEECCCHHHHHHH
Confidence            3334555666677899999999999999999998876 333467887777899999999999999999999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCC-----CCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS-----LNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~-----~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (422)
                      +++.+. +||.|+++.|+|..|...++..|++++.++.+.+..     .|++.+++..  .++++++++|||||||.+++
T Consensus        90 ~~~~l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~nP~NPTG~~~~  166 (360)
T PRK07392         90 AGRELA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL--TPNDGLLLNNPHNPTGKLWS  166 (360)
T ss_pred             HHHHhC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc--cCCCEEEEeCCCCCCCCCcC
Confidence            999764 688999999999999999999999999999754332     4677776654  46899999999999999999


Q ss_pred             HHHHHHHHcCCCeEEEccCCccccCCC---chhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCC
Q 014594          237 DEDLLKILEMPILVVLDEAYTEFSGLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN  313 (422)
Q Consensus       237 ~e~l~~i~~~~~~li~Deay~~~~~~~---~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~  313 (422)
                      .+++.++++...++|+||+|.+|.+++   +........+++++++||||.||++|+|+||+++++++++.+.+....++
T Consensus       167 ~~~l~~l~~~~~~~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~~~~~~~  246 (360)
T PRK07392        167 REAILPLLEQFALVVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWRDPWP  246 (360)
T ss_pred             HHHHHHHHHHCCEEEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHHHhhCCCCC
Confidence            999999998733577799999997643   22333455678999999999999999999999999999999988777789


Q ss_pred             CcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEe
Q 014594          314 VSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRH  391 (422)
Q Consensus       314 ~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~~  391 (422)
                      +|.+.|.++.++|++.+|.+ .++.++++++.+.+.|++++++.+.+++++|+|++++.  ++.++.+.++ ++||.+++
T Consensus       247 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~fl~~~~~~--~~~~l~~~ll~~~gv~v~p  324 (360)
T PRK07392        247 VNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTPLPSAANFLLVQSQG--SALQLQEKLLQQHRILIRD  324 (360)
T ss_pred             CCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCCEEEEEcCC--CHHHHHHHHHhhCCEEEEe
Confidence            99999999999999888888 77889999999999999886666778889999999863  6788888864 78999999


Q ss_pred             CCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          392 YNNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       392 ~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +..++  .++|+||+++.++++++|.++++++
T Consensus       325 g~~f~~~~~~~iRi~~~~~~~~~~l~~al~~~  356 (360)
T PRK07392        325 CLSFPELGDRYFRVAVRTEAENQRLLEALAAI  356 (360)
T ss_pred             CCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence            98743  3579999999988889999999875

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1e-49  Score=387.14  Aligned_cols=323  Identities=38%  Similarity=0.622  Sum_probs=286.6

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCcchHHHHHHHHHHcCCCC-CCEEEeCCHHHHHHHHHHHhcCC
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDP  169 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~~~~~~lr~~la~~~~~~~-~~i~~~~G~~~al~~~~~~l~~~  169 (422)
                      +.++++|+.|+|++++++.+++++.+ +.  ...+||+++..+||+++++++++++ ++|++|+|+++++..++++++++
T Consensus        25 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~~~  104 (356)
T PRK04870         25 ATGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALACAKP  104 (356)
T ss_pred             CCCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhcCC
Confidence            35789999999999999999999986 32  2367888888999999999999865 48999999999999999999999


Q ss_pred             CCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CC
Q 014594          170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PI  248 (422)
Q Consensus       170 gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~  248 (422)
                      ||+|+++.|+|..|...++..|++++.++.++++++|++.+++.+.+.++++|+++|||||||.+++.+++++|++. +.
T Consensus       105 gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~  184 (356)
T PRK04870        105 GATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPG  184 (356)
T ss_pred             CCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCC
Confidence            99999999999999999999999999999877789999999999975689999999999999999999999999987 88


Q ss_pred             eEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccC
Q 014594          249 LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN  328 (422)
Q Consensus       249 ~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~  328 (422)
                      ++|+||+|.+|.+.. ....+...+++++++|||| ++++|+|+||+++++++++.+.....+++++.++|.++..++++
T Consensus       185 ~ii~De~y~~~~~~~-~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~~~~~~~~~~~~~~~q~~a~~~l~~  262 (356)
T PRK04870        185 LVVVDEAYQPFAGDS-WLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAELDKVRPPYNVNVLTQATALFALEH  262 (356)
T ss_pred             EEEEECCchhhcCcc-hHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCCHHHHHHHHHccCCCcCCHHHHHHHHHHHhC
Confidence            999999999887532 2333455678999999999 89999999999999999999988877889999999999999987


Q ss_pred             ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC--CCCCeEEEEe
Q 014594          329 PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK--ELKGYVRVSV  405 (422)
Q Consensus       329 ~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~--~~~~~iRis~  405 (422)
                      .++++ .+++++++++.+.+.|++++.+.+.|.+++|+|++++   +.+++.+.|.++||.|+++..+  ..++++||++
T Consensus       263 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~  339 (356)
T PRK04870        263 VDVLDAQAAQLRAERTRLAAALAALPGVTVFPSAANFILVRVP---DAAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTV  339 (356)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCeEEEEECC---CHHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeC
Confidence            66777 8888999999999999988556667889999999986   5788999999999999998763  3478999999


Q ss_pred             cChhhHHHHHHHHhhh
Q 014594          406 GKPEHTDALMECLMHL  421 (422)
Q Consensus       406 ~~~~~~~~l~~al~~l  421 (422)
                      ++++++++|.++|+.+
T Consensus       340 ~~~~~~~~l~~al~~~  355 (356)
T PRK04870        340 GTPEENAQFLAALKAA  355 (356)
T ss_pred             CCHHHHHHHHHHHHHh
Confidence            9999999999999875

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.6e-49  Score=387.97  Aligned_cols=318  Identities=32%  Similarity=0.546  Sum_probs=270.3

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhc-CCC---CCCCCCcchHHHHHHHHHHcC--------CCCCCEEEeCCHHHHHHHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQ-LKF---PYIYPDPESRRLRAALAKDSG--------LESDHILVGCGADELIDLIM  163 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~---~~~y~~~~~~~lr~~la~~~~--------~~~~~i~~~~G~~~al~~~~  163 (422)
                      .+++|+.|++++++++.+.+++.+ +..   ..+||+.|..+||++++++++        +++++|++|+|+++++..++
T Consensus        29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~  108 (374)
T PRK02610         29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLL  108 (374)
T ss_pred             ceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHH
Confidence            479999999999999999999876 222   256888889999999999986        78899999999999999888


Q ss_pred             HHhcCCCC-EEEEcCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhc---CCCeEEEEeCCCCccCcCCCHH
Q 014594          164 RCVLDPGD-KIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDE  238 (422)
Q Consensus       164 ~~l~~~gd-~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~e  238 (422)
                      .+++.+|| .|+++.|+|..|...++..|++++.++.+. ++++|++++++++++   +++|+|++||||||||.+++.+
T Consensus       109 ~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~  188 (374)
T PRK02610        109 IATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAA  188 (374)
T ss_pred             HHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHH
Confidence            88888886 899999999999999999999999999654 589999999998864   5899999999999999999999


Q ss_pred             HHHHHHcC--CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcH
Q 014594          239 DLLKILEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSV  316 (422)
Q Consensus       239 ~l~~i~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~  316 (422)
                      +++++++.  +++||+||+|.+|.+. .....+...+++|+++||||.||++|+|+||+++++++++.+.+.+..++++.
T Consensus       189 ~l~~l~~~~~~~~iI~De~Y~~~~~~-~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~~~~~~~~~~  267 (374)
T PRK02610        189 ELEWLRSLPEDILVVIDEAYFEFSQT-TLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHPELIAVLEKVRLPYNLPS  267 (374)
T ss_pred             HHHHHHhccCCcEEEEeccccccCcc-chHHHHhcCCCEEEEEecchhccCcccceeeeecCHHHHHHHHHhcCCCCCCH
Confidence            99999876  8999999999998753 23334445678899999999999999999999999999999988887899999


Q ss_pred             HHHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC
Q 014594          317 AAEVAACAALQNP-IYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK  395 (422)
Q Consensus       317 ~~~~aa~~~L~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~  395 (422)
                      +.|.++..+|++. .+.+..+++.+.|+.+.+.|++++.+.+.|++|+|+|++++.+.+..++++.|+++||.++++   
T Consensus       268 ~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~l~~~~~~~~~~~~l~~~gi~v~~~---  344 (374)
T PRK02610        268 FSQLAAQLALEHRQELLAAIPEILQERDRLYQALQELPQLRVWPSAANFLYLRLSQDAALAALHQALKAQGTLVRHT---  344 (374)
T ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEeCCCcceEEEEeCCCCCCHHHHHHHHHHCCEEEEeC---
Confidence            9999999999875 444433344455788889998876556678999999999987678899999999999999875   


Q ss_pred             CCCCeEEEEecChhhHHHHHHHHh
Q 014594          396 ELKGYVRVSVGKPEHTDALMECLM  419 (422)
Q Consensus       396 ~~~~~iRis~~~~~~~~~l~~al~  419 (422)
                        ++++||+++.++++++..+.|+
T Consensus       345 --~~~lRls~~~~~~~~~~l~~l~  366 (374)
T PRK02610        345 --GGGLRITIGTPEENQRTLERLQ  366 (374)
T ss_pred             --CCeEEEeCCCHHHHHHHHHHHH
Confidence              3799999998665444444443

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=3.4e-49  Score=382.49  Aligned_cols=340  Identities=37%  Similarity=0.630  Sum_probs=291.5

Q ss_pred             hHHHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCcchHHHHHHHHHH
Q 014594           65 SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKD  141 (422)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~~~~~~lr~~la~~  141 (422)
                      ++.+..+.++.+|-..            .....++|+.|++++++|+.+.+++.+ +.  ...+|++++..++|++++++
T Consensus         4 ~~~~~~~~~~~~~~~~------------~~~~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~~~~~~~lr~~ia~~   71 (351)
T PRK14807          4 NLVREEIKGFKNYEVH------------SIPYKYKMDANETPFELPEEVIKNIQEIVKSSQVNIYPDPTAEKLREELARY   71 (351)
T ss_pred             hHHHHHHhhcCCCCCC------------CCCceeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCCCccHHHHHHHHHHH
Confidence            3456666666766210            112358999999999999999999876 22  23668877788999999999


Q ss_pred             cCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeE
Q 014594          142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKC  221 (422)
Q Consensus       142 ~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~  221 (422)
                      +++++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|++++.++.++++++|++.+++.+++.++|+
T Consensus        72 ~~~~~~~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~  151 (351)
T PRK14807         72 CSVVPTNIFVGNGSDEIIHLIMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKL  151 (351)
T ss_pred             hCCCcccEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCE
Confidence            99999999999999999999999999999999999999999999889999999999987778999999999997558999


Q ss_pred             EEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHH
Q 014594          222 IFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (422)
Q Consensus       222 i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~  300 (422)
                      |+++|||||||.+++.+++.++++. +.++|+||+|.+|. +..........+++++++||||.||++|+|+||++++++
T Consensus       152 v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~  230 (351)
T PRK14807        152 VFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFY-GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANEN  230 (351)
T ss_pred             EEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhc-ccchHHHhhhCCCEEEEecchHhcccchhceeeeecCHH
Confidence            9999999999999999999999987 78899999999885 333333344568999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHH
Q 014594          301 IIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLK  379 (422)
Q Consensus       301 ~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~  379 (422)
                      +++.+......++.+.+.|.++..+|+++ +.+ ..+.++++++.+.+.|++++++.+.|++++|+|++++   +.+++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~i~~~---~~~~~~  306 (351)
T PRK14807        231 ILKYLNLVKSPYNINSLSQVIALKVLRTG-VLKERVNYILNERERLIKELSKIPGIKVYPSKTNFILVKFK---DADYVY  306 (351)
T ss_pred             HHHHHHHccCCCCcCHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHhCCCcEECcCCccEEEEEcC---CHHHHH
Confidence            99999888778889999999999999874 455 7778889999999999887556667888999999996   578899


Q ss_pred             HHHHhCCcEEEeCCC-CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          380 DDLAKMGVMIRHYNN-KELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       380 ~~L~~~gI~v~~~~~-~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +.|.++||.++++.. .+.++++||+++.++++++|.++|+++
T Consensus       307 ~~l~~~gV~v~~~~~~~~~~~~iRis~~~~~~~~~l~~~l~~~  349 (351)
T PRK14807        307 QGLLERGILVRDFSKVEGLEGALRITVSSCEANDYLINGLKEL  349 (351)
T ss_pred             HHHHHCCEEEEECCCCCCCCCeEEEEcCCHHHHHHHHHHHHHh
Confidence            999999999998764 455789999999999899999999875

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.3e-49  Score=385.90  Aligned_cols=335  Identities=30%  Similarity=0.463  Sum_probs=284.9

Q ss_pred             HHHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHcCCC
Q 014594           66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE  145 (422)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~la~~~~~~  145 (422)
                      ..+..+..+.+|.+..         +....+.++|+.|+|++++++.+     ......+||+++..+||+++++++|++
T Consensus        11 ~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~ne~~~~~~~~~-----~~~~~~~Yp~~~~~~Lr~aia~~~~~~   76 (354)
T PRK04635         11 LARPELLALTPYQSAR---------RIGGRGDIWINANESPFNNEYKL-----DLARLNRYPECQPPELINAYSAYAGVA   76 (354)
T ss_pred             HhhHHhhcCCCCCCCC---------CcCCCCcEEeeCCCCCCCCChhh-----hhHHhccCCCCCHHHHHHHHHHHhCcC
Confidence            4556666666664321         11234569999999999988654     111236799888899999999999999


Q ss_pred             CCCEEEeCCHHHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEE
Q 014594          146 SDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL  224 (422)
Q Consensus       146 ~~~i~~~~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l  224 (422)
                      +++|++|+|+++++.+++++++++| |+|+++.|+|..|...++..|++++.+|.++++.+|++.+++ +  .++|+|++
T Consensus        77 ~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~l~~-~--~~~~li~i  153 (354)
T PRK04635         77 PEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDYIEQ-L--DGAKLVFI  153 (354)
T ss_pred             HHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHh-c--cCCCEEEE
Confidence            9999999999999999999999999 899999999999999999999999999987778899998873 3  58999999


Q ss_pred             eCCCCccCcCCCHHHHHHHHcC--CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHH
Q 014594          225 TSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII  302 (422)
Q Consensus       225 ~~p~NPtG~~~~~e~l~~i~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~  302 (422)
                      ||||||||.+++.+++.+|++.  +++||+||+|.+|....+........+++++++||||.||++|+|+||++++++++
T Consensus       154 ~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~  233 (354)
T PRK04635        154 CNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELI  233 (354)
T ss_pred             eCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHHH
Confidence            9999999999999999999986  79999999999987544444444567899999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHH
Q 014594          303 EYLWRAKQPYNVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLK  379 (422)
Q Consensus       303 ~~l~~~~~~~~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~  379 (422)
                      +.+.....+++.+.+.|.++.++|.+.  ++++ .++.++++|+.+.+.|++++.+.+.|++++|+|++++   +.+++.
T Consensus       234 ~~l~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~~~~~~---~~~~~~  310 (354)
T PRK04635        234 EILMRVIAPYPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEGNGNYVLAKFD---DVDAVF  310 (354)
T ss_pred             HHHHhhcCCCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCcEEEEECC---CHHHHH
Confidence            999887778999999999999999764  4455 7778899999999999998756667788999999986   577888


Q ss_pred             HHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594          380 DDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       380 ~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  420 (422)
                      +.|.++||.++.+..+..++++|||+++.++++.|.++++.
T Consensus       311 ~~l~~~gv~v~~~~~~~~~~~lRis~~~~e~~~~l~~al~~  351 (354)
T PRK04635        311 KALWDAGIVARAYKDPRLANCIRFSFSNRAETDKLIGLIRN  351 (354)
T ss_pred             HHHHHCCEEEEECCCCCCCCeEEEEeCCHHHHHHHHHHHHH
Confidence            88889999999876555678999999999999999999975

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=3.5e-49  Score=382.50  Aligned_cols=333  Identities=28%  Similarity=0.514  Sum_probs=287.1

Q ss_pred             chHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594           82 PFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (422)
Q Consensus        82 ~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~  160 (422)
                      ....++++.|....++++|+.|++++++++.+.+++.+ .....+||+++..+||+++++++++++++|++|+|+++++.
T Consensus         6 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~   85 (354)
T PRK06358          6 NINEIAREKGLTKNMILDFSANINPLGVPESLKQAITENLDKLVEYPDPDYLELRKRIASFEQLDLENVILGNGATELIF   85 (354)
T ss_pred             cHHHHHHHhCCCccceEEecCCCCCCCCCHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHH
Confidence            34556777887767789999999999999999999886 33346788888889999999999999999999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHH
Q 014594          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (422)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e  238 (422)
                      .+++++ .+ +.|+++.|+|+.|...++..|++++.++.+  .++.+| +++++.+. .+++++++++||||||.+++.+
T Consensus        86 ~~~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~-~~~~~v~~~~P~NPtG~~~~~~  161 (354)
T PRK06358         86 NIVKVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIK-EEIDLVFLCNPNNPTGQLISKE  161 (354)
T ss_pred             HHHHHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhc-cCCCEEEEeCCCCCCCCccCHH
Confidence            999976 44 689999999999999999999999999964  357788 66666665 5799999999999999999999


Q ss_pred             HHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcC
Q 014594          239 DLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQ  310 (422)
Q Consensus       239 ~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~  310 (422)
                      ++.+|++.    ++++|+||+|.+|.+++.   .....+..+++++++||||.||++|+|+||++++ +.+++.+.+...
T Consensus       162 ~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~  241 (354)
T PRK06358        162 EMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMRE  241 (354)
T ss_pred             HHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCC
Confidence            99998764    899999999999986542   2333445689999999999999999999999984 788899988888


Q ss_pred             CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEE
Q 014594          311 PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMI  389 (422)
Q Consensus       311 ~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v  389 (422)
                      .++++.+.|.++..+|++++|++ .++.++++++.+.+.|++++.+.+.+++|+|+|++++   +..++++.|.++||.+
T Consensus       242 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~~~~~~---~~~~~~~~l~~~gI~v  318 (354)
T PRK06358        242 PWSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVNFIFFKLE---KPIDLRKELLKKGILI  318 (354)
T ss_pred             CCcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcceEEEEEcC---chHHHHHHHHHCCeEE
Confidence            89999999999999998878877 8889999999999999988656666778899999997   3478999999999999


Q ss_pred             EeCCCC-C-CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          390 RHYNNK-E-LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       390 ~~~~~~-~-~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ++++.+ + .++++||+++.++++++|.++++++
T Consensus       319 ~~~~~f~~~~~~~iRls~~~~~~~~~l~~~l~~~  352 (354)
T PRK06358        319 RSCSNYRGLDENYYRVAVKSREDNKKLLKALEVI  352 (354)
T ss_pred             EECCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence            999875 3 3579999999999999999999875

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=5.2e-49  Score=384.00  Aligned_cols=349  Identities=36%  Similarity=0.595  Sum_probs=302.1

Q ss_pred             HHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCC
Q 014594           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLES  146 (422)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~  146 (422)
                      ++++.++.+|.+...+...++++  .+.++++|+.|++++++++.+++++.+ ......||+....+||+++++++++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~~   84 (367)
T PRK02731          7 NPGILDIAPYVPGKPIEELVREY--GIADIIKLASNENPLGPSPKAIEAIRAAADELHRYPDGSGFELKAALAEKFGVDP   84 (367)
T ss_pred             hhhhcccCCcCCCCCHHHHHHhc--CCCceEEecCCCCCCCCCHHHHHHHHHHHHhhcCCCCCcHHHHHHHHHHHhCcCH
Confidence            45566677775555556566665  457799999999999999999888876 333367887777899999999999999


Q ss_pred             CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeC
Q 014594          147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS  226 (422)
Q Consensus       147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~  226 (422)
                      ++|++|+|+++++..++.+++++||.|+++.|+|..|...++..|++++.++. +++++|++.+++.++ +++++|+++|
T Consensus        85 ~~i~~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~-~~~~~v~l~~  162 (367)
T PRK02731         85 ERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA-KDYGHDLDAMLAAVT-PRTRLVFIAN  162 (367)
T ss_pred             HHEEEcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc-cCCCCCHHHHHHHhC-CCCcEEEEeC
Confidence            99999999999999999999999999999999999998888889999999997 567899999999997 6899999999


Q ss_pred             CCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCC---chhhhhhcCCcEEEEccChhhhccccccceeeecCHH
Q 014594          227 PNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (422)
Q Consensus       227 p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~---~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~  300 (422)
                      ||||||.+++.+++.++++.   ++++|+||+|.++.+.+   ......+..+++++++||||.||++|+|+||++++++
T Consensus       163 p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~  242 (367)
T PRK02731        163 PNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPPE  242 (367)
T ss_pred             CCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCHH
Confidence            99999999999999999975   89999999999877532   2233344567899999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHH
Q 014594          301 IIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLK  379 (422)
Q Consensus       301 ~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~  379 (422)
                      +++.+.+...+++.+.+.|.++.++|++.++.+ .++.++++++.+.+.|++++ +...+++++|+|++++...++.++.
T Consensus       243 ~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~g~~~~i~~~~~~~~~~~~  321 (367)
T PRK02731        243 IIDALNRVRQPFNVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAELG-LEYIPSVGNFILVDFDDGKDAAEAY  321 (367)
T ss_pred             HHHHHHHccCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CccCCCCceEEEEECCCCCCHHHHH
Confidence            999998888888899999999999999878877 88899999999999999886 4455778999999997667899999


Q ss_pred             HHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          380 DDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       380 ~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +.|.++||.++++..++.++++||++++.++++++.++++++
T Consensus       322 ~~L~~~gI~v~~~~~~~~~~~iRis~~~~~e~~~l~~aL~~~  363 (367)
T PRK02731        322 QALLKRGVIVRPVAGYGLPNALRITIGTEEENRRFLAALKEF  363 (367)
T ss_pred             HHHHHCCEEEEeCCCCCCCCeEEEecCCHHHHHHHHHHHHHH
Confidence            999999999999876555789999999999999999998764

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.5e-49  Score=383.85  Aligned_cols=324  Identities=32%  Similarity=0.506  Sum_probs=282.3

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 014594           96 DIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV  174 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl  174 (422)
                      ..++|+.|++++++++.+.+++.+ .....+|++++..+||+++++++++++++|++|+|+++++..++..++++||.|+
T Consensus        33 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~vl  112 (369)
T PRK08153         33 FRARIGANESGFGPSPSVIAAMREAAAEIWKYGDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDPVV  112 (369)
T ss_pred             ceeEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEE
Confidence            357999999999999999999876 3333678877789999999999999999999999999999999999999999999


Q ss_pred             EcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC---CCeEE
Q 014594          175 DCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVV  251 (422)
Q Consensus       175 ~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~---~~~li  251 (422)
                      ++.|+|+.+...++..|++++.+|.+.+ ..|++++++.+.++++++|++++||||||.+++.+++.++++.   +++||
T Consensus       113 v~~p~y~~~~~~~~~~g~~~~~vp~~~~-~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI  191 (369)
T PRK08153        113 TSLGAYPTFNYHVAGFGGRLVTVPYRDD-REDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLV  191 (369)
T ss_pred             ECCCcchHHHHHHHHcCCeEEEeeCCCC-CCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEE
Confidence            9999999999888889999999997544 6899999887765789999999999999999999999999875   89999


Q ss_pred             EccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccCChH
Q 014594          252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIY  331 (422)
Q Consensus       252 ~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~  331 (422)
                      +||+|.+|.+++.........+++++++||||.||++|+|+||+++++++++.+.+....++++.++|.++.++|++++|
T Consensus       192 ~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~~~~~s~~~q~~~~~~l~~~~~  271 (369)
T PRK08153        192 LDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRNHFGMNRIAQAAALAALKDQAY  271 (369)
T ss_pred             EeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhcCCCCCHHHHHHHHHHhcCHHH
Confidence            99999998865433333334678999999999999999999999999999999988888899999999999999998888


Q ss_pred             HH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC-CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChh
Q 014594          332 LE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPE  409 (422)
Q Consensus       332 ~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~-~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~  409 (422)
                      ++ .++.++++++.+.+.|++.+. ...|++++|+|++++. ...+.++.+.|.++||.++.......++++||+++.++
T Consensus       272 ~~~~~~~~~~~r~~~~~~L~~~g~-~~~p~~~~f~~~~~~~~~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~~~~  350 (369)
T PRK08153        272 LAEVVGKIAAARDRIAAIARANGL-TPLPSATNFVAIDCGRDGAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCGPDE  350 (369)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCC-ccCCCcCcEEEEECCCCcccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecCCHH
Confidence            88 889999999999999998864 4568899999999852 35678999999999999964332334679999999999


Q ss_pred             hHHHHHHHHhhh
Q 014594          410 HTDALMECLMHL  421 (422)
Q Consensus       410 ~~~~l~~al~~l  421 (422)
                      +++.+.++++.+
T Consensus       351 ~~~~~~~al~~~  362 (369)
T PRK08153        351 ELDLFAEALPEA  362 (369)
T ss_pred             HHHHHHHHHHHH
Confidence            999999998753

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=7.1e-49  Score=382.22  Aligned_cols=348  Identities=43%  Similarity=0.700  Sum_probs=302.4

Q ss_pred             HHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCC
Q 014594           67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLE  145 (422)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~  145 (422)
                      +.+++..+.+|.+........++++.++.++|+|+.|+|+++++|.+.+++.+ ......||++...++|++++++++++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~   85 (361)
T PRK00950          6 IRAEVKEIKPYVPGKSKEEIAREYGIDPESIIKLGSNENPLGPSPKAVEAIEKELSKIHRYPEPDAPELREALSKYTGVP   85 (361)
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHhCCCccceEEccCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCC
Confidence            45677777888766667777788887777999999999999999999888876 33336788777799999999999999


Q ss_pred             CCCEEE-eCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEE
Q 014594          146 SDHILV-GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL  224 (422)
Q Consensus       146 ~~~i~~-~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l  224 (422)
                      +++|++ |+|+++++..+++.++++||.|+++.|+|..+...++..|++++.++.++++.+|++.+++.+. .+++++++
T Consensus        86 ~~~i~~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~~  164 (361)
T PRK00950         86 VENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREEDFSLDVDSVLNAIT-EKTKVIFL  164 (361)
T ss_pred             HHHEEEeCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhc-cCCCEEEE
Confidence            999999 7999999999999899999999999999999988888999999999977778999999999986 68999999


Q ss_pred             eCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHH
Q 014594          225 TSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (422)
Q Consensus       225 ~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~  303 (422)
                      ++|+||||.+++.+++.++++. |+++|+||+|.+|.. .+........+++++++||||.||++|+|+||+++++++++
T Consensus       165 ~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~-~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~  243 (361)
T PRK00950        165 CTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAE-YDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLID  243 (361)
T ss_pred             eCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCc-cchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCHHHHH
Confidence            9999999999999999999987 999999999998873 23333344567899999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHH
Q 014594          304 YLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDL  382 (422)
Q Consensus       304 ~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L  382 (422)
                      .+.+...+++.+.+.+.++..+|++.+|++ .+++++++++.+.+.|+    +.+.+++++|+|++++ +.++.++.+.|
T Consensus       244 ~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~----~~~~~~~~~~i~~~~~-~~~~~~~~~~l  318 (361)
T PRK00950        244 YYMRAKTPFSLTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP----FKVYPSEANFVLVDVT-PMTAKEFCEEL  318 (361)
T ss_pred             HHHHhcCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC----eeECCCcceEEEEECC-CCCHHHHHHHH
Confidence            999888888899999999999999888877 88888899999988886    3346788999999994 56899999999


Q ss_pred             HhCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          383 AKMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       383 ~~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .++||.++++..+  ..++++||++++.++++++.++|+++
T Consensus       319 ~~~gv~v~~~~~f~~~~~~~lRis~~~~~~~~~l~~~L~~i  359 (361)
T PRK00950        319 LKRGVIVRDCTSFRGLGDYYIRVSIGTFEENERFLEILKEI  359 (361)
T ss_pred             HHCCEEEeeCCccCCCCCCeEEEECCCHHHHHHHHHHHHHH
Confidence            9999999987753  23579999999988899999998764

>PRK09105 putative aminotransferase; Provisional

Probab=100.00  E-value=5.1e-49  Score=383.05  Aligned_cols=321  Identities=30%  Similarity=0.438  Sum_probs=279.4

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK  172 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~  172 (422)
                      .++.++|+.|+|+++++|.+.+++.+ ......||+++..+||+++++++|+++++|++|+|+++++..++.+++++||+
T Consensus        42 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~~~gd~  121 (370)
T PRK09105         42 AEGAVFLNANECPLGPSPAARDAAARSAALSGRYDLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFTSPTAG  121 (370)
T ss_pred             CCCcEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHcCCCCE
Confidence            46789999999999999999999876 32335688777899999999999999999999999999999999999999999


Q ss_pred             EEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC---CCe
Q 014594          173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PIL  249 (422)
Q Consensus       173 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~---~~~  249 (422)
                      |++++|+|..|...++..|++++.++.+.++.+|++.+++. . ++++++++||||||||.+++.++++++++.   +++
T Consensus       122 Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~-~-~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~  199 (370)
T PRK09105        122 LVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAA-D-PNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSV  199 (370)
T ss_pred             EEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhc-C-CCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcE
Confidence            99999999999999999999999999877788999999887 3 578999999999999999999999999864   899


Q ss_pred             EEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccCC
Q 014594          250 VVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP  329 (422)
Q Consensus       250 li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~  329 (422)
                      +|+||+|.+|....+.....+..+++++++||||.||++|+|+||+++++++++.+... ..++.+.+.|.++.++|.+.
T Consensus       200 lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~-~~~~~~~~~~~aa~~~L~~~  278 (370)
T PRK09105        200 LLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF-GHNPLPVPAAAAGLASLRDP  278 (370)
T ss_pred             EEEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHHHHHhc-CCCCcCHHHHHHHHHHHhCH
Confidence            99999999886544334444457899999999999999999999999999999998877 56678889999999999988


Q ss_pred             hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecCh
Q 014594          330 IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKP  408 (422)
Q Consensus       330 ~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~  408 (422)
                      +|++ .++.++++++.+.+.|++++ +.+.+++++|++++++  .+..++.+.|.++||.+.... ...++++||+++++
T Consensus       279 ~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~~~f~~~~~~--~~~~~l~~~L~~~gI~v~~~~-~~~~~~~Ris~~~~  354 (370)
T PRK09105        279 KLVPQRRAENAAVREDTIAWLKKKG-YKCTPSQANCFMVDVK--RPAKAVADAMAKQGVFIGRSW-PIWPNWVRVTVGSE  354 (370)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCCcEEEEeCC--CCHHHHHHHHHHCCcEEecCC-CCCCCeEEEEcCCH
Confidence            8888 88899999999999999986 4556677778788874  478899999998999994322 23468999999998


Q ss_pred             hhHHHHHHHHhhh
Q 014594          409 EHTDALMECLMHL  421 (422)
Q Consensus       409 ~~~~~l~~al~~l  421 (422)
                      +++++|.++++.+
T Consensus       355 ~~~~~l~~al~~~  367 (370)
T PRK09105        355 EEMAAFRSAFAKV  367 (370)
T ss_pred             HHHHHHHHHHHHH
Confidence            8899999999865

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=7.4e-49  Score=380.83  Aligned_cols=336  Identities=26%  Similarity=0.423  Sum_probs=284.6

Q ss_pred             CCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHH
Q 014594           80 ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADEL  158 (422)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~a  158 (422)
                      +......+.+++.++.++++|+.|+|++++++.+++++.+ +.....||+.+..+||+++++++++++++|++|+|++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~p~~~~~a~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~   84 (356)
T PRK08056          5 GGNIREAATVLGISPDQLLDFSANINPLGMPVSLKRAIIDNLDCAERYPDVEYRHLHQALARHHQVPASWILAGNGETES   84 (356)
T ss_pred             CccHHHHHHHhCCChhhEEEeccccCCCCCCHHHHHHHHHHHHhcccCcCccHHHHHHHHHHHhCcChhhEEECCCHHHH
Confidence            3445556777887778899999999999999999999876 333357888788999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (422)
Q Consensus       159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (422)
                      +..+++.+ .+|+ +++..|+|..|...++..|++++.++.+  +++.+| +++++.+. +++|+++++|||||||.+++
T Consensus        85 l~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~-~~~k~v~l~~p~NPTG~~~~  160 (356)
T PRK08056         85 IFAVVSGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALT-PDLDCLFLCTPNNPTGLLPE  160 (356)
T ss_pred             HHHHHHHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhcc-CCCCEEEEeCCcCCCCCCCC
Confidence            99999976 6776 7778999999999999999999999964  345566 45556665 78999999999999999999


Q ss_pred             HHHHHHHHcC----CCeEEEccCCccccCCC-chhhhhhcCCcEEEEccChhhhccccccceeeec-CHHHHHHHHHhcC
Q 014594          237 DEDLLKILEM----PILVVLDEAYTEFSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ  310 (422)
Q Consensus       237 ~e~l~~i~~~----~~~li~Deay~~~~~~~-~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~  310 (422)
                      .+++++|++.    ++++|+||+|.+|.++. .....+...+++++++||||.||++|+|+||+++ ++++++.+.+...
T Consensus       161 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~~  240 (356)
T PRK08056        161 RQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQM  240 (356)
T ss_pred             HHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCC
Confidence            8888777653    89999999999987544 2333344567899999999999999999999998 5678888888777


Q ss_pred             CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEE
Q 014594          311 PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMI  389 (422)
Q Consensus       311 ~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v  389 (422)
                      +++++.++|.++..+|++++|.. .++.++++++++.+.|++++.+.+.+++++|+|++++.  +..++++.|+++||.+
T Consensus       241 ~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gI~v  318 (356)
T PRK08056        241 PWSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVWPGRANYLFLRCER--PDIDLQRALLTQRILI  318 (356)
T ss_pred             CCchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCCCcEEEEEcCC--ChHHHHHHHHHCCeEE
Confidence            88899999999999998878887 88999999999999999886566677889999999863  4678999999999999


Q ss_pred             EeCCCC-C-CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          390 RHYNNK-E-LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       390 ~~~~~~-~-~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +++..+ + ..++|||+++.+++++.|.++|+++
T Consensus       319 ~~~~~f~~~~~~~iRis~~~~~~~~~l~~~l~~~  352 (356)
T PRK08056        319 RSCANYPGLDSRYYRVAIRSAAENERLLAALRNV  352 (356)
T ss_pred             EECCCCCCCCCCEEEEEEcCHHHHHHHHHHHHHH
Confidence            998864 2 2479999999999999999999875

>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=9e-50  Score=344.91  Aligned_cols=351  Identities=60%  Similarity=0.938  Sum_probs=315.9

Q ss_pred             CCchHHHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHH
Q 014594           62 TGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKD  141 (422)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~la~~  141 (422)
                      +..++++++..+...|+++..++....++|+   +++.++.++++..|+|+-      +...+.||++....++.+++..
T Consensus        11 ~~i~~l~Pyrcarddf~eg~lldane~a~G~---~iv~ld~~e~~ryPdP~q------~efk~~~~d~rnk~ls~a~~~d   81 (375)
T KOG0633|consen   11 MGISFLRPYRCARDDFQEGLLLDANEAALGR---DIVKLDANENPRYPDPEQ------MEFKYVYPDPRNKRLSDALAQD   81 (375)
T ss_pred             ccccccChhhhhhhhccccceecchhhhcCC---CceEeccccCCCCcCHHH------cccccccCCcccchhhhhcccC
Confidence            4566889999999999999999888888875   679999999999888864      3445778999889999999988


Q ss_pred             cCCCCCCEEEeCCHHHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-CC
Q 014594          142 SGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-KP  219 (422)
Q Consensus       142 ~~~~~~~i~~~~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-~~  219 (422)
                      -++++++|.++.|+.|.++.++++.|.|| ++|+...|+|.+|...+...+++++.+|.+.+|.+|.|++.+.++.+ .+
T Consensus        82 kpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~i  161 (375)
T KOG0633|consen   82 KPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKI  161 (375)
T ss_pred             CCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccc
Confidence            88999999999999999999999999999 89999999999999999999999999999999999999999998654 89


Q ss_pred             eEEEEeCCCCccCcCCCHHHHHHHHcC--CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeec
Q 014594          220 KCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (422)
Q Consensus       220 ~~i~l~~p~NPtG~~~~~e~l~~i~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~  297 (422)
                      |++++++|+||||..+..+.+.+|.+.  +.++++||+|.+|++..+.+.++..++|++++.+|||.||++|+|+||-.+
T Consensus       162 K~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~  241 (375)
T KOG0633|consen  162 KCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAF  241 (375)
T ss_pred             eEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceeehhhhhhhcCcceeEeecccc
Confidence            999999999999999999999999997  899999999999998889999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHhcCCCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCc--ccCCCceEEEEEeCCC
Q 014594          298 PLSIIEYLWRAKQPYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTSG  372 (422)
Q Consensus       298 ~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~f~~~~~~~~  372 (422)
                      +.++++.+++.++||+.|..+..+|.++|++  ..+++ .++.+.+.|.+|...|.+++++.  +.+..+||+++++.++
T Consensus       242 ~~~ia~iln~~KaPYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~  321 (375)
T KOG0633|consen  242 PLSIAEILNRAKAPYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGG  321 (375)
T ss_pred             cHHHHHHHHhccCCccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCC
Confidence            9999999999999999999999999999995  56777 99999999999999999998876  5677889999999744


Q ss_pred             CC--HHHH-HHHHHhCCcEEEeCCC-CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          373 MD--AKKL-KDDLAKMGVMIRHYNN-KELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       373 ~~--~~~~-~~~L~~~gI~v~~~~~-~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .+  +..+ .+.+.+.||.||+.+. .++.|++||++++++++..|.+.++.+
T Consensus       322 ~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvGt~EentvL~k~~K~~  374 (375)
T KOG0633|consen  322 DNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVGTPEENTVLMKCLKQF  374 (375)
T ss_pred             CcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcCCcccchHHHHHHHhh
Confidence            22  2333 3444589999998776 678999999999999999999998864

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.2e-48  Score=379.46  Aligned_cols=319  Identities=32%  Similarity=0.575  Sum_probs=278.9

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK  172 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~  172 (422)
                      .++|+|+.|++++++++.+.+++.+. . ....||+++..+||+++++++++++++|++|+|+++++.+++++++++||+
T Consensus        24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~  103 (353)
T PRK05387         24 AKLIKLNTNENPYPPSPKVLEAIRAALGDDLRLYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFNHDRP  103 (353)
T ss_pred             cceeeccCCCCCCCCCHHHHHHHHHHhhhhhhcCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCE
Confidence            56899999999999999999998763 2 236788888899999999999999999999999999999999999999999


Q ss_pred             EEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC--CCeE
Q 014594          173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILV  250 (422)
Q Consensus       173 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~--~~~l  250 (422)
                      |++++|+|+.|...++..|++++.++.++++.+|++++++     ++++++++|||||||.+++.+++.+|++.  ++++
T Consensus       104 vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~-----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~l  178 (353)
T PRK05387        104 LLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLR-----PNGGIIFPNPNAPTGIALPLAEIERILAANPDSVV  178 (353)
T ss_pred             EEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHh-----cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEE
Confidence            9999999999999899999999999987788899999863     35789999999999999999999999976  8999


Q ss_pred             EEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC---CCCCcHHHHHHHHHHcc
Q 014594          251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ---PYNVSVAAEVAACAALQ  327 (422)
Q Consensus       251 i~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~---~~~~~~~~~~aa~~~L~  327 (422)
                      |+||+|.+|... +........+++++++||||.||++|+|+||+++++++++.+.+...   .++++.+.|.++.++|.
T Consensus       179 ivDe~y~~~~~~-~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~  257 (353)
T PRK05387        179 VIDEAYVDFGGE-SAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKNSFNSYPLDRLAQAGAIAAIE  257 (353)
T ss_pred             EEeCcccccCCc-chHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhc
Confidence            999999988532 33334445688999999999999999999999999999999887764   36788999999999998


Q ss_pred             CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014594          328 NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG  406 (422)
Q Consensus       328 ~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~  406 (422)
                      +.++.+ .++++.++++.+.+.|+++++ .+.|++++|+|++++ +.+++++.+.|.++||.++++..+..++++||+++
T Consensus       258 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~  335 (353)
T PRK05387        258 DEAYFEETRAKVIATRERLVEELEALGF-EVLPSKANFVFARHP-SHDAAELAAKLRERGIIVRHFNKPRIDQFLRITIG  335 (353)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCC-eECCCcCcEEEEECC-CCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC
Confidence            878877 888999999999999999864 556788999999987 56789999999999999987755445789999999


Q ss_pred             ChhhHHHHHHHHhhh
Q 014594          407 KPEHTDALMECLMHL  421 (422)
Q Consensus       407 ~~~~~~~l~~al~~l  421 (422)
                      ..++++++.++|+++
T Consensus       336 ~~~~~~~~~~~L~~~  350 (353)
T PRK05387        336 TDEEMEALVDALKEI  350 (353)
T ss_pred             CHHHHHHHHHHHHHH
Confidence            888888888888764

>PRK07681 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.5e-48  Score=384.34  Aligned_cols=327  Identities=23%  Similarity=0.343  Sum_probs=275.9

Q ss_pred             CCCCCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCcchHHHHHHHHHHcC------CCC-CCEEEeCCHHHHHHH
Q 014594           92 RKPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDPESRRLRAALAKDSG------LES-DHILVGCGADELIDL  161 (422)
Q Consensus        92 ~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y~~~~~~~lr~~la~~~~------~~~-~~i~~~~G~~~al~~  161 (422)
                      ..+.++++|+.|++++++++.+.+++.+. .  ..+.|+..|..+||++++++++      +++ ++|++|+|+++++..
T Consensus        29 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~  108 (399)
T PRK07681         29 AAGHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVH  108 (399)
T ss_pred             hcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHH
Confidence            34567899999999999999998888762 2  2245666789999999999973      577 799999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~  239 (422)
                      ++.+++++||.|+++.|+|+.|...++..|++++.++.++  +|.+|++++++.+. .++|+|+++|||||||.+++.++
T Consensus       109 ~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~v~l~~P~NPTG~~~s~~~  187 (399)
T PRK07681        109 LPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIA-DKAKMMILNFPGNPVPAMAHEDF  187 (399)
T ss_pred             HHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcc-ccceEEEEeCCCCCcCcCCCHHH
Confidence            9999999999999999999999999999999999999643  46789999999886 68999999999999999999999


Q ss_pred             HHHHHcC----CCeEEEccCCccccCCCc-hhh--hh-hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC-
Q 014594          240 LLKILEM----PILVVLDEAYTEFSGLES-RME--WV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-  310 (422)
Q Consensus       240 l~~i~~~----~~~li~Deay~~~~~~~~-~~~--~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~-  310 (422)
                      +++|++.    +++||+||+|.+|.+++. ...  .. ...+++|+++||||.||++|+|+||+++++++++.+..... 
T Consensus       188 ~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~~~~~~~~  267 (399)
T PRK07681        188 FKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQFKSN  267 (399)
T ss_pred             HHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecCHHHHHHHHHHHhh
Confidence            8888764    999999999999875432 111  12 23468999999999999999999999999999999987764 


Q ss_pred             -CCCCcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHh-CC
Q 014594          311 -PYNVSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK-MG  386 (422)
Q Consensus       311 -~~~~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~-~g  386 (422)
                       .++++.+.|.++..+|++. .|++ .++.++++++.+.+.|+++++....|.+|+|+|++++++.++.++.+.|++ +|
T Consensus       268 ~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~g~f~~~~l~~~~~~~~~~~~l~~~~g  347 (399)
T PRK07681        268 TDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTFGWNVDKPAGSMFVWAEIPKGWTSLSFAYALMDRAN  347 (399)
T ss_pred             cccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeeEEEEECCCCCCHHHHHHHHHHhCC
Confidence             5788999999999999885 6777 888999999999999999864334688899999999877788999999885 89


Q ss_pred             cEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          387 VMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       387 I~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      |.++++..++  .++++||+++.+  .+++.+++++|
T Consensus       348 v~v~pg~~f~~~~~~~iRis~~~~--~~~~~~~l~~l  382 (399)
T PRK07681        348 VVVTPGHAFGPHGEGFVRIALVQD--EEVLQQAVENI  382 (399)
T ss_pred             EEEeCChhhCcCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            9999987643  357999999864  35677777665

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=6.1e-48  Score=370.69  Aligned_cols=311  Identities=31%  Similarity=0.482  Sum_probs=269.8

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCcchHHHHHHHHHHcC---CCCCCEEEeCCHHHHHHHHHHHhc
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSG---LESDHILVGCGADELIDLIMRCVL  167 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~~~~~~lr~~la~~~~---~~~~~i~~~~G~~~al~~~~~~l~  167 (422)
                      +.++++|+.|+|++++++.+++++.+ +.  ..+.||+++..+||++++++++   +++++|++|+|+++++.++++++ 
T Consensus        18 ~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~-   96 (335)
T PRK14808         18 KRDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF-   96 (335)
T ss_pred             CCceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHh-
Confidence            46789999999999999999998876 22  2245787789999999999998   88999999999999999999977 


Q ss_pred             CCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcCC
Q 014594          168 DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP  247 (422)
Q Consensus       168 ~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~~  247 (422)
                         |.|++++|+|..|...++..|++++.+|.++++.++...    +  .++++++++|||||||.+++.+++.+|++.+
T Consensus        97 ---d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~----~--~~~~~i~i~nP~NPTG~~~s~~~l~~l~~~~  167 (335)
T PRK14808         97 ---DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVN----V--GEGDVVFIPNPNNPTGHVFEREEIERILKTG  167 (335)
T ss_pred             ---CcEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCChhH----c--cCCCEEEEeCCCCCCCCCcCHHHHHHHHhcC
Confidence               679999999999999999999999999987666655332    2  3568999999999999999999999999889


Q ss_pred             CeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHcc
Q 014594          248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ  327 (422)
Q Consensus       248 ~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~  327 (422)
                      ++||+||+|.+|.. .+....+...+++++++||||.|+++|+|+||+++++++++.+.+.+.+++.+.++|.++..+++
T Consensus       168 ~~ii~DE~Y~~f~~-~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~~~~~~~~~~q~a~~~~l~  246 (335)
T PRK14808        168 AFVALDEAYYEFHG-ESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVRLPFNVSYVSQMFAKVALD  246 (335)
T ss_pred             CEEEEECchhhhcC-CchHHHHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhcCCCCCCHHHHHHHHHHHh
Confidence            99999999999863 23334445567999999999999999999999999999999998888789999999999999998


Q ss_pred             CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014594          328 NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG  406 (422)
Q Consensus       328 ~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~  406 (422)
                      +.++.. .++.+.++++.+.+.|++++ +.+.+++|+|+|++++ +.+..++.+.|.++||.|+.+.     +++||+++
T Consensus       247 ~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~g~f~~~~l~-~~~~~~~~~~l~~~Gi~V~~~~-----~~~Risi~  319 (335)
T PRK14808        247 HREIFEERTKFIVEERERMKSALREMG-YRITDSRGNFVFIFME-KEEKERLLEHLRAKNIAVRSFR-----EGVRITIG  319 (335)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCCCeEEEEeCC-CccHHHHHHHHHHCCeEEEECC-----CCeEEecC
Confidence            766666 77788888999999999986 5566778999999997 4466889999999999999753     68999999


Q ss_pred             ChhhHHHHHHHHhhhC
Q 014594          407 KPEHTDALMECLMHLY  422 (422)
Q Consensus       407 ~~~~~~~l~~al~~l~  422 (422)
                      .+++++++.++|+.++
T Consensus       320 ~~~~~~~~~~~l~~~~  335 (335)
T PRK14808        320 KREENDMILKELEVFK  335 (335)
T ss_pred             CHHHHHHHHHHHHhhC
Confidence            9999999999998764

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=8.9e-48  Score=370.22  Aligned_cols=310  Identities=40%  Similarity=0.653  Sum_probs=270.8

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD  171 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd  171 (422)
                      .++++|+.|++++++++.+.+++.+ +.  ...+||+.|..+||+++++++++++++|++|+|+++++..++..+  +||
T Consensus        18 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~--~gd   95 (337)
T PRK03967         18 NYRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVKLF--EGK   95 (337)
T ss_pred             CceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHh--CCC
Confidence            3679999999999999999888875 32  236788888999999999999999999999999999999998866  799


Q ss_pred             EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcCCCeEE
Q 014594          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVV  251 (422)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~~~~li  251 (422)
                      +|+++.|+|..|...++..|++++.++.+.++++|++.+++.+  .++++++++|||||||.+++.+++.++++.++++|
T Consensus        96 ~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~--~~~~~v~~~~P~NPtG~~~~~~~l~~i~~~~~~ii  173 (337)
T PRK03967         96 HIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKA--KNASAVFICSPNNPTGNLQPEEEILKVLETGKPVV  173 (337)
T ss_pred             eEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhc--cCCCEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEE
Confidence            9999999999998888999999999998777899999998875  47889999999999999999999999998899999


Q ss_pred             EccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccCChH
Q 014594          252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIY  331 (422)
Q Consensus       252 ~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~  331 (422)
                      +||+|.+|.. .+........+++++++||||.||++|+|+||+++++++++.+.+...+++.+.++|.++..+|++.++
T Consensus       174 ~De~y~~~~~-~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~~~~~~~~~~~q~~~~~~l~~~~~  252 (337)
T PRK03967        174 LDEAYAEFSG-KSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIKPPFSLNILTMKIVRLALDHYDL  252 (337)
T ss_pred             EECchhhhcc-cchHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCHHH
Confidence            9999999874 233344445678999999999999999999999999999999998888899999999999999988777


Q ss_pred             HH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhh
Q 014594          332 LE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEH  410 (422)
Q Consensus       332 ~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~  410 (422)
                      .. .++.+.++|+.+.+.|++.    ..|++++|+|++++       +.+.|+++||.++++.. ...+++||+++.+++
T Consensus       253 ~~~~~~~~~~~r~~l~~~L~~~----~~~~~~~~~~~~~~-------~~~~l~~~gi~v~~~~~-~~~~~~Ri~~~~~~~  320 (337)
T PRK03967        253 IEERIDYIIKERERVRRELGEY----AYPSDANFLLLKLD-------AYDYLLENGIVVRKLSG-RLEGHIRVTVGKREE  320 (337)
T ss_pred             HHHHHHHHHHHHHHHHHHhccC----cCCCCCcEEEEhHH-------HHHHHHHCCEEEEeCCC-CCCCeEEEecCCHHH
Confidence            66 6667778888999999875    34789999999873       67888899999998753 346799999999888


Q ss_pred             HHHHHHHHhhh
Q 014594          411 TDALMECLMHL  421 (422)
Q Consensus       411 ~~~l~~al~~l  421 (422)
                      +++|.++|+++
T Consensus       321 ~~~l~~~l~~~  331 (337)
T PRK03967        321 NDEFIKALKEI  331 (337)
T ss_pred             HHHHHHHHHHH
Confidence            99999999875

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=100.00  E-value=6.6e-48  Score=378.73  Aligned_cols=327  Identities=18%  Similarity=0.247  Sum_probs=268.8

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCC-cchHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHH
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPD-PESRRLRAALAKDS----G--LESD-HILVGCGADELIDL  161 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y~~-~~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~~  161 (422)
                      .+.++++|+.|++++++++.+.+++.+. .  ....|++ .|..+||+++++++    |  ++++ +|++|+|+++++.+
T Consensus        28 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~  107 (388)
T PRK07366         28 AGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAH  107 (388)
T ss_pred             cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHH
Confidence            4567899999999999999999888762 2  2356855 58999999999987    3  6787 69999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~  239 (422)
                      ++++++++||+|+++.|+|..|...++..|++++.++.+  .++.+|++++++.+. .++|+|++|+||||||.+++.++
T Consensus       108 ~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~~p~NPTG~~~s~~~  186 (388)
T PRK07366        108 LPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVL-AQARLMVLSYPHNPTTAIAPLSF  186 (388)
T ss_pred             HHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhc-ccceEEEEeCCCCCCCccCCHHH
Confidence            999999999999999999999999999999999999964  346789999988775 57999999999999999999999


Q ss_pred             HHHHHcC----CCeEEEccCCccccCCCc--h--hhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC
Q 014594          240 LLKILEM----PILVVLDEAYTEFSGLES--R--MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ  310 (422)
Q Consensus       240 l~~i~~~----~~~li~Deay~~~~~~~~--~--~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~  310 (422)
                      +++|++.    +++||+||+|.+|.+++.  .  ....+ ..+++++++||||.||++|+|+||+++++++++.+.+...
T Consensus       187 ~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li~~l~~~~~  266 (388)
T PRK07366        187 FQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQALRQVKA  266 (388)
T ss_pred             HHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCHHHHHHHHHHHh
Confidence            9998764    899999999999976432  1  22222 2357899999999999999999999999999999988776


Q ss_pred             CCCCc--HHHHHHHHHHcc-CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCC--CCHHHHHHHHH-
Q 014594          311 PYNVS--VAAEVAACAALQ-NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG--MDAKKLKDDLA-  383 (422)
Q Consensus       311 ~~~~~--~~~~~aa~~~L~-~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~--~~~~~~~~~L~-  383 (422)
                      .++.+  ...+.++.++|. +.+|++ .++.++++++.+.+.|+++++....|++|+|+|+++++.  .++.++++.|. 
T Consensus       267 ~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~l~~  346 (388)
T PRK07366        267 VVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQIGWPVPLPEATMYVWAKLPEPWQGNSVEFCTQLVA  346 (388)
T ss_pred             hcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeEEEEEECCcccCCCHHHHHHHHHH
Confidence            64432  333444555554 467888 899999999999999998875335688999999999854  25778887775 


Q ss_pred             hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          384 KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       384 ~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      ++||.++++..++  ..+|+||+++.+  .+++.+++++|+
T Consensus       347 ~~gv~v~pg~~f~~~~~~~iRi~~~~~--~~~l~~~l~rl~  385 (388)
T PRK07366        347 QTGVAASPGSGFGKSGEGYVRFALVHD--PDILEEAVERIA  385 (388)
T ss_pred             hCCEEEeCchHhCcCCCCeEEEEecCC--HHHHHHHHHHHH
Confidence            7899999987643  358999999864  477999888863

>PRK06290 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.6e-47  Score=376.84  Aligned_cols=325  Identities=20%  Similarity=0.335  Sum_probs=272.6

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhc-C--CCCCCCCCcchHHHHHHHHHHc----C---CCCC-CEEEeCCHHHHHHH
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQ-L--KFPYIYPDPESRRLRAALAKDS----G---LESD-HILVGCGADELIDL  161 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~--~~~~~y~~~~~~~lr~~la~~~----~---~~~~-~i~~~~G~~~al~~  161 (422)
                      ++.++++|+.|++++++++.+.+++.+ +  ....+||+.|..+||+++++++    |   ++++ +|++|+|+++++..
T Consensus        42 ~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~  121 (410)
T PRK06290         42 PDMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAM  121 (410)
T ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHH
Confidence            456799999999999999998888865 2  1235688788999999999996    4   5566 79999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~  239 (422)
                      ++.+++++||.|+++.|+|+.|...++..|++++.++.+.  ++.+|++++++.+. .++|+|+++|||||||.+++.++
T Consensus       122 ~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~nP~NPTG~v~s~e~  200 (410)
T PRK06290        122 LPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIK-EKAKLLYLNYPNNPTGAVATKEF  200 (410)
T ss_pred             HHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhc-ccceEEEEECCCCCCCcCCCHHH
Confidence            9999999999999999999999999999999999999653  57789999999886 68999999999999999999999


Q ss_pred             HHHHHcC----CCeEEEccCCccccCCCc--h-hhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCC
Q 014594          240 LLKILEM----PILVVLDEAYTEFSGLES--R-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY  312 (422)
Q Consensus       240 l~~i~~~----~~~li~Deay~~~~~~~~--~-~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~  312 (422)
                      +++|++.    +++||+||+|.++.+++.  . .......+++|+++||||.||++|+|+||+++++++++.+.+....+
T Consensus       201 l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~l~~~~~~~  280 (410)
T PRK06290        201 YEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNELIVKAFATVKDNN  280 (410)
T ss_pred             HHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeCHHHHHHHHHHHhcc
Confidence            8888753    999999999999875432  1 22222346789999999999999999999999999999998877654


Q ss_pred             --CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCC-------CCHHHHHHHH
Q 014594          313 --NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG-------MDAKKLKDDL  382 (422)
Q Consensus       313 --~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~-------~~~~~~~~~L  382 (422)
                        +.+.+.|.++..+|++++|.+ .++.++++++.+.+.|+++++....|.+++|+|+++|++       .++.++++.|
T Consensus       281 ~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~L  360 (410)
T PRK06290        281 DSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEVGFKAEMPGGTFYLYVKAPKGTKSGIKFENAEEFSQYL  360 (410)
T ss_pred             ccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhCCCeecCCCeeeEEEEECCCccccCCCCCCHHHHHHHH
Confidence              445689999999999888888 899999999999999999864333466778899999854       3688999999


Q ss_pred             HhCC-cEEEeCCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014594          383 AKMG-VMIRHYNNKELKGYVRVSVG----KPEHTDALMECLMH  420 (422)
Q Consensus       383 ~~~g-I~v~~~~~~~~~~~iRis~~----~~~~~~~l~~al~~  420 (422)
                      +++| |.+.++..  .++|+||+++    .+++++++.+++++
T Consensus       361 l~~~~v~~~p~~~--~~~~lRi~~~~~~~~~~~~~~~~~~l~~  401 (410)
T PRK06290        361 IKEKLISTVPWDD--AGHFLRFSVTFEAKDEEEEDRILEEIKR  401 (410)
T ss_pred             HHhCCEEEECCcc--ccCeEEEEEEcccccccchhHHHHHHHH
Confidence            8665 55567653  3479999998    77888999888875

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=100.00  E-value=1.1e-47  Score=378.07  Aligned_cols=323  Identities=21%  Similarity=0.299  Sum_probs=272.3

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHc----C---CCCC-CEEEeCCHHHHHHHH
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS----G---LESD-HILVGCGADELIDLI  162 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~-~~~~lr~~la~~~----~---~~~~-~i~~~~G~~~al~~~  162 (422)
                      .+.++|+|+.|++++++++.+.+++.+ +.....|+++ |..+||+++++++    |   ++++ +|++|+|+++++..+
T Consensus        27 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~  106 (396)
T PRK09147         27 ADLPPISLSIGEPKHPTPAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAF  106 (396)
T ss_pred             cCCCeEecCCCCCCCCCCHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHH
Confidence            357889999999999999999998876 3444678765 7899999999986    6   5564 899999999999999


Q ss_pred             HHHhcCC---CCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594          163 MRCVLDP---GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (422)
Q Consensus       163 ~~~l~~~---gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (422)
                      +++++++   ||.|+++.|+|..|...++..|++++.+|.+  ++|.+|++++++.+. .++|++++||||||||.+++.
T Consensus       107 ~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~-~~~k~i~l~nP~NPTG~~~s~  185 (396)
T PRK09147        107 AQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVW-ARTQLLFVCSPGNPTGAVLPL  185 (396)
T ss_pred             HHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHh-hccEEEEEcCCCCCcCccCCH
Confidence            9999999   8999999999999999999999999999964  357899999998886 589999999999999999999


Q ss_pred             HHHHHHHcC----CCeEEEccCCccccCCCc--hhhh------h--hcCCcEEEEccChhhhccccccceeeecCHHHHH
Q 014594          238 EDLLKILEM----PILVVLDEAYTEFSGLES--RMEW------V--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (422)
Q Consensus       238 e~l~~i~~~----~~~li~Deay~~~~~~~~--~~~~------~--~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~  303 (422)
                      +++++|++.    +++||+||+|.++.+++.  ....      .  ...+++++++||||.|+++|+|+||+++++++++
T Consensus       186 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~  265 (396)
T PRK09147        186 DDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLK  265 (396)
T ss_pred             HHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCHHHHH
Confidence            999998864    999999999999875431  1111      1  1357899999999999999999999999999999


Q ss_pred             HHHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHH
Q 014594          304 YLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD  380 (422)
Q Consensus       304 ~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~  380 (422)
                      .+.+...  .++++.+.|.++.+++.+.+++. .++.++++++.+.+.|++. .....|++|+|+|++++  .+..++++
T Consensus       266 ~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~p~~g~f~~~~~~--~~~~~~~~  342 (396)
T PRK09147        266 KFLLYRTYHGCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV-LDVQLPDAGFYLWAKVP--GDDTEFAR  342 (396)
T ss_pred             HHHHHhhhcccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCCeeEEEEEECC--CCHHHHHH
Confidence            8887664  36788899999888888777888 8999999999999999875 22246889999999997  46788888


Q ss_pred             HHH-hCCcEEEeCCCCC--------CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          381 DLA-KMGVMIRHYNNKE--------LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       381 ~L~-~~gI~v~~~~~~~--------~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .|+ ++||.+.+|..+.        ..+++||+++.++  +++.+++++|
T Consensus       343 ~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~--~~l~~~l~rl  390 (396)
T PRK09147        343 RLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPL--AECVEAAERI  390 (396)
T ss_pred             HHHHhCCEEEeCCccccccccCCCCCCCeEEEEecCCH--HHHHHHHHHH
Confidence            876 7899999887532        2579999999753  6788888876

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-47  Score=374.44  Aligned_cols=319  Identities=32%  Similarity=0.536  Sum_probs=274.7

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcC-C----CCCCCCCcchHHHHHHHHHHc------CCCCCCEEEeCCHHHHHHHHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQL-K----FPYIYPDPESRRLRAALAKDS------GLESDHILVGCGADELIDLIMR  164 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~----~~~~y~~~~~~~lr~~la~~~------~~~~~~i~~~~G~~~al~~~~~  164 (422)
                      ..++|+.|+|++++++.+++++.+. .    ...+||+++..+||+++++++      ++++++|++|+|+++++..+++
T Consensus        27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~  106 (368)
T PRK03317         27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQ  106 (368)
T ss_pred             ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHH
Confidence            4699999999999999999998762 1    236788888899999999998      5788999999999999999999


Q ss_pred             HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHH
Q 014594          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL  244 (422)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~  244 (422)
                      +++++||.|+++.|+|..|...++..|.+++.++.++++++|++++++++.++++|+|++++||||||.+++.+++++|+
T Consensus       107 ~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~  186 (368)
T PRK03317        107 AFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAIL  186 (368)
T ss_pred             HhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence            99999999999999999999999999999999987778899999999999766899999999999999999999999999


Q ss_pred             cC-CCeEEEccCCccccCCC--chhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHH
Q 014594          245 EM-PILVVLDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVA  321 (422)
Q Consensus       245 ~~-~~~li~Deay~~~~~~~--~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a  321 (422)
                      +. ++++|+||+|.+|.+.+  ......+..+++++++||||.||++|+|+||+++++++++.+.....+|+.+++.|.+
T Consensus       187 ~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~~~~~~~~s~~~~~a  266 (368)
T PRK03317        187 DAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDALRLVRLPYHLSAVTQAA  266 (368)
T ss_pred             HHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHHHHHHhcCCCCCCCHHHHHH
Confidence            87 99999999999987543  2233334456899999999999999999999999999999998877789999999999


Q ss_pred             HHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceE-EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCC
Q 014594          322 ACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNF-ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKG  399 (422)
Q Consensus       322 a~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f-~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~  399 (422)
                      +.++|++.++.. .+++++++++.+.+.|++++. .+.++.++| +|.+++   ++.++.+.|+++||.++++.   .++
T Consensus       267 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~---~~~~~~~~l~~~Gv~v~~~~---~~~  339 (368)
T PRK03317        267 ARAALRHADELLASVAALRAERDRVVAWLRELGL-RVAPSDANFVLFGRFA---DRHAVWQGLLDRGVLIRDVG---IPG  339 (368)
T ss_pred             HHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCC-EeCCCCCcEEEEeccC---CHHHHHHHHHHCCEEEEeCC---CCC
Confidence            999998754444 667788999999999998864 444445555 454553   67889999999999999764   368


Q ss_pred             eEEEEecChhhHHHHHHHHhhh
Q 014594          400 YVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       400 ~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ++||+++.+++++++.++++++
T Consensus       340 ~iRi~~~~~~~~~~~~~~l~~~  361 (368)
T PRK03317        340 WLRVTIGTPEENDAFLAALAEV  361 (368)
T ss_pred             eEEEecCCHHHHHHHHHHHHHH
Confidence            9999999988889999998764

>PRK08960 hypothetical protein; Provisional

Probab=100.00  E-value=1.1e-47  Score=376.81  Aligned_cols=326  Identities=20%  Similarity=0.265  Sum_probs=276.1

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCC-CCcchHHHHHHHHHHc------CCCCCCEEEeCCHHHHHHHHH
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y-~~~~~~~lr~~la~~~------~~~~~~i~~~~G~~~al~~~~  163 (422)
                      .+.++++|+.|++++++++.+.+++.+ +. ....| +..|..++|+++++++      ++++++|++|+|+++++..++
T Consensus        30 ~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~  109 (387)
T PRK08960         30 AGHDVIHLEIGEPDFTTAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLAS  109 (387)
T ss_pred             cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHH
Confidence            456789999999999999999999876 32 22457 5568899999999997      368899999999999999999


Q ss_pred             HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (422)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~  241 (422)
                      .+++++||+|++++|+|+.+...++..|++++.++.+.  ++.+|++.+++.++ ++++++++++||||||.+++.++++
T Consensus       110 ~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~~~~~~~  188 (387)
T PRK08960        110 SLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWN-ADTVGALVASPANPTGTLLSRDELA  188 (387)
T ss_pred             HHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhC-ccceEEEEECCCCCCCcCcCHHHHH
Confidence            99999999999999999999999999999999988643  56899999999887 6788999999999999999999999


Q ss_pred             HHHcC----CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--CCCc
Q 014594          242 KILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVS  315 (422)
Q Consensus       242 ~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~~~~  315 (422)
                      +|++.    |+++|+||+|.++.++..........+++++++||||.||++|+|+||+++++++++.+.+....  ++.+
T Consensus       189 ~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~s  268 (387)
T PRK08960        189 ALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVAPPAAVPELEKLAQNLYISAS  268 (387)
T ss_pred             HHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccCCcccEEEEEEcCHHHHHHHHHHHhhhccCCC
Confidence            98753    99999999999987654333333445789999999999999999999999999999998877654  4678


Q ss_pred             HHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCC-CCCHHHHHHHHH-hCCcEE
Q 014594          316 VAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS-GMDAKKLKDDLA-KMGVMI  389 (422)
Q Consensus       316 ~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~-~~~~~~~~~~L~-~~gI~v  389 (422)
                      .+.|.++.++|.+.  .++. .++.++++++.+.+.|++++... ..|.+++|+|+++++ ..++.++++.|+ ++||.+
T Consensus       269 ~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v  348 (387)
T PRK08960        269 TPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQGAFYLYADISAFGGDAFAFCRHFLETEHVAF  348 (387)
T ss_pred             HHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEE
Confidence            99999999999753  6677 88899999999999999887433 358889999999985 467888988876 789999


Q ss_pred             EeCCCCC---CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          390 RHYNNKE---LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       390 ~~~~~~~---~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .+|..++   .++|+||+++.+  .++|.++++++
T Consensus       349 ~pg~~f~~~~~~~~iRi~~~~~--~~~l~~al~~l  381 (387)
T PRK08960        349 TPGLDFGRHQAGQHVRFAYTQS--LPRLQEAVERI  381 (387)
T ss_pred             cCchHhCCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            9987643   257999999973  58899999886

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=3.2e-47  Score=365.77  Aligned_cols=305  Identities=23%  Similarity=0.342  Sum_probs=255.4

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 014594           96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVD  175 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~  175 (422)
                      ++|+|+.|+||++..          ....+||++.+.+||+++++++++++++|++|+|+++++..++. ++++|+ |++
T Consensus        17 ~~i~l~~Nenp~~~~----------~~~~~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~~~~~-vv~   84 (332)
T PRK06425         17 RIIDFSANINDFMDI----------GDISIYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YINVGN-III   84 (332)
T ss_pred             CEEEeccccCCCcCh----------hhcccCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-HhCCCc-EEE
Confidence            579999999999522          12367999999999999999999999999999999999999997 567765 777


Q ss_pred             cCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEE
Q 014594          176 CPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVV  251 (422)
Q Consensus       176 ~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li  251 (422)
                      +.|+|..|...++..|++++.+|.+. ++.|.+.+++    .++|+|++||||||||.+++.+++++|++.    ++++|
T Consensus        85 ~~P~y~~y~~~~~~~G~~v~~vp~~~-~~~~~~~l~~----~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI  159 (332)
T PRK06425         85 VEPNFNEYKGYAFTHGIRISALPFNL-INNNPEILNN----YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLF  159 (332)
T ss_pred             eCCChHHHHHHHHHcCCeEEEEeCCc-ccCcHHHHhh----cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEE
Confidence            79999999999999999999999754 4566655542    478999999999999999999999998753    89999


Q ss_pred             EccCCccccCCC--chhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccCC
Q 014594          252 LDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP  329 (422)
Q Consensus       252 ~Deay~~~~~~~--~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~  329 (422)
                      +||+|.+|.++.  +........+++++++||||.||++|+|+||+++++++++.+.+...+++.+..++.++. .....
T Consensus       160 ~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~~~~~~~~~~~~l~-~~~~~  238 (332)
T PRK06425        160 IDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKITEPWSVCDPAIDFIR-SIDLD  238 (332)
T ss_pred             EecchhccccccchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHHHHHHHHcCCCCccCHHHHHHHH-HhhhH
Confidence            999999998643  233334456899999999999999999999999999999999988888887776654433 22334


Q ss_pred             hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCC--CCCeEEEEec
Q 014594          330 IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE--LKGYVRVSVG  406 (422)
Q Consensus       330 ~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~--~~~~iRis~~  406 (422)
                      .+.+ .++.++++|+.+.+.|+++++....+++|+|+|++++   ++.++.+.|+++||.++++..++  .++|+||+++
T Consensus       239 ~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~g~f~~~~~~---~~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~~  315 (332)
T PRK06425        239 YVAKHSLDIMENERSYLINNLEAMGFRAAGDPSANFITFMIP---DAHDFYSYLLKNGILVRLLDDYECLGEQYIRIAIR  315 (332)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCceEEEEEcC---CHHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC
Confidence            5555 7889999999999999998643334678999999986   68899999999999999987742  2579999999


Q ss_pred             ChhhHHHHHHHHhhh
Q 014594          407 KPEHTDALMECLMHL  421 (422)
Q Consensus       407 ~~~~~~~l~~al~~l  421 (422)
                      +++++++|.++|+++
T Consensus       316 ~~~~~~~l~~al~~~  330 (332)
T PRK06425        316 RRSFNIKLVNALRNF  330 (332)
T ss_pred             CHHHHHHHHHHHHHH
Confidence            999999999999864

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=1.4e-47  Score=368.61  Aligned_cols=316  Identities=22%  Similarity=0.271  Sum_probs=263.2

Q ss_pred             CCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHH
Q 014594           79 PILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE-SDHILVGCGADE  157 (422)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~  157 (422)
                      .+.....++..+|.++.++++|+.|+||+++++....+    ....+||++. .+||+++++++|++ +++|++|+|+++
T Consensus         8 hg~~~~~~~~~~~~~~~~~i~ls~Nenp~~~~~~~~~~----~~~~~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e   82 (339)
T PRK06959          8 HGGNLHEAARRYGIPYDAWLDLSTGINPHGYPVPPVPA----DAWRRLPEDD-DGLAACAARYYGAPDAAHVLPVAGSQA   82 (339)
T ss_pred             CCchHHHHHHHcCCChhhhceeccCCCCCCCCCCCCCH----HHHHhCCCch-HHHHHHHHHHhCCCCcccEEECcCHHH
Confidence            34455666777787677899999999999887322211    1125699876 99999999999996 589999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594          158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (422)
Q Consensus       158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (422)
                      ++..+.. ++++|| |+++.|+|..|...++..|++++.++.++      +.    +. ..++++++||||||||.+++.
T Consensus        83 ~i~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~------~~----~~-~~~~~v~l~nPnNPTG~~~s~  149 (339)
T PRK06959         83 AIRALPA-LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA------DT----LP-AALTHLIVVNPNNPTAERLPA  149 (339)
T ss_pred             HHHHHHH-hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc------hh----cc-ccCCEEEEeCCCCCCCCCCCH
Confidence            9997766 578877 88999999999999999999999988533      22    22 356789999999999999999


Q ss_pred             HHHHHHHc----CCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCC
Q 014594          238 EDLLKILE----MPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN  313 (422)
Q Consensus       238 e~l~~i~~----~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~  313 (422)
                      +++.+|++    .+.++|+||+|.+|....+..... ..+++++++||||.||++|+|+||+++++++++.+.+...+|+
T Consensus       150 ~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~-~~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l~~~~~~~~  228 (339)
T PRK06959        150 ARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHT-DRPGLVVLRSVGKFFGLAGVRAGFVLAAPALLAALRDALGAWT  228 (339)
T ss_pred             HHHHHHHHHHHHcCCEEEEECCCccCCCcccchhcc-CCCCEEEEecChhhcCCcchheEEEecCHHHHHHHHHhcCCCC
Confidence            99999875    288999999999987543333222 4578999999999999999999999999999999999988999


Q ss_pred             CcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeC
Q 014594          314 VSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHY  392 (422)
Q Consensus       314 ~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~  392 (422)
                      ++.++|.++.++|++.+|.+ .++.++++|+++.+.|+++++ .+. +.++|+|++++   ++.++.+.|.++||.|+.+
T Consensus       229 vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~-~~~~f~~~~~~---~~~~l~~~l~~~GI~vr~~  303 (339)
T PRK06959        229 VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAHGF-AVH-ATPLFSWTDDP---RAAALHAALARRGIWTRYF  303 (339)
T ss_pred             CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCC-Ccc-CcceEEEEeCC---CHHHHHHHHHhCCeEEEEC
Confidence            99999999999999988888 899999999999999999863 333 46799999985   5788999999999999976


Q ss_pred             CCCCCCCeEEEEe-cChhhHHHHHHHHhhh
Q 014594          393 NNKELKGYVRVSV-GKPEHTDALMECLMHL  421 (422)
Q Consensus       393 ~~~~~~~~iRis~-~~~~~~~~l~~al~~l  421 (422)
                      .   ..+++||++ ++++++++|.++|+.+
T Consensus       304 ~---~~~~lRisi~~~~~e~~~l~~al~~~  330 (339)
T PRK06959        304 A---PPPSVRFGLPADEAEWQRLEDALAEC  330 (339)
T ss_pred             C---CCCeEEEECCCCHHHHHHHHHHHHHH
Confidence            3   356999999 5778889999998764

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=100.00  E-value=5.5e-47  Score=371.90  Aligned_cols=334  Identities=22%  Similarity=0.336  Sum_probs=275.5

Q ss_pred             HHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-chHHHHHHHHHHc----C--CCCC-CEEEeCC
Q 014594           86 LSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCG  154 (422)
Q Consensus        86 ~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y~~~-~~~~lr~~la~~~----~--~~~~-~i~~~~G  154 (422)
                      .+.+....+.++++|+.|++++++++.+.+++.+. .  ....|+++ |..+||+++++++    |  ++++ +|++|+|
T Consensus        22 ~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G  101 (385)
T PRK09276         22 KKAEKIARGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIG  101 (385)
T ss_pred             HHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccC
Confidence            34444445567899999999999999998888762 2  23578765 7899999999997    4  4566 5999999


Q ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccC
Q 014594          155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDG  232 (422)
Q Consensus       155 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG  232 (422)
                      +++++..+++.++++||+|++++|+|..|...++..|++++.++.+  +++.+|++++++.+. .++++|+++|||||||
T Consensus       102 ~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG  180 (385)
T PRK09276        102 SKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVA-KKAKLMFINYPNNPTG  180 (385)
T ss_pred             cHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcc-ccceEEEEeCCCCCCC
Confidence            9999999999999999999999999999999999999999999964  357789999999886 6899999999999999


Q ss_pred             cCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHH
Q 014594          233 SIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY  304 (422)
Q Consensus       233 ~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~  304 (422)
                      .+++.+++++|++.    ++++|+||+|.+|.+++.   .....+ ..+++++++||||.||++|+|+||+++++++++.
T Consensus       181 ~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~~l~~~  260 (385)
T PRK09276        181 AVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNADLIAG  260 (385)
T ss_pred             CCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCHHHHHH
Confidence            99999888888763    899999999999875431   111222 2467899999999999999999999999999999


Q ss_pred             HHHhcCC--CCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHH
Q 014594          305 LWRAKQP--YNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD  380 (422)
Q Consensus       305 l~~~~~~--~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~  380 (422)
                      +.+....  .+.+.+.|.++..+|++ ..|++ +++.++++++.+.+.|++++.....|.+++|+|++++++.+..++.+
T Consensus       261 ~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~  340 (385)
T PRK09276        261 LGKVKSNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKLGLEVEPPKATFYVWAPVPKGYTSAEFAT  340 (385)
T ss_pred             HHHHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEECCCCCCHHHHHH
Confidence            8876654  34677889999999975 57777 88899999999999999986322345677889999987778899999


Q ss_pred             HHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          381 DLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       381 ~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      .|+ ++||.++++..+.  .++++||+++.++  +++.+++++|+
T Consensus       341 ~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~--~~l~~~l~~l~  383 (385)
T PRK09276        341 LLLDKAGVVVTPGNGFGEYGEGYFRIALTVPD--ERIEEAVERIK  383 (385)
T ss_pred             HHHHhCCEEECCchhhCCCCCCeEEEEeCCCH--HHHHHHHHHHh
Confidence            887 6899999987633  3579999998653  68999998873

>PRK06348 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-46  Score=369.35  Aligned_cols=325  Identities=24%  Similarity=0.367  Sum_probs=273.1

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhc-C-CCCCCCCCc-chHHHHHHHHHHc------CCCCCCEEEeCCHHHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQ-L-KFPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGADELIDLIMRC  165 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~-~~~~~y~~~-~~~~lr~~la~~~------~~~~~~i~~~~G~~~al~~~~~~  165 (422)
                      .++++|+.|++++++++.+.+++.+ . .....|+++ |..+||+++++++      ++++++|++|+|+++++.+++.+
T Consensus        29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~  108 (384)
T PRK06348         29 PDIIDLSLGDPDLITDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQS  108 (384)
T ss_pred             CCcEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHH
Confidence            4579999999999988888775543 2 233668665 7789999999987      46889999999999999999999


Q ss_pred             hcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594          166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (422)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i  243 (422)
                      ++++||+|+++.|+|..|...++..|++++.++.  ++++.+|++++++.++ +++++|++++||||||.+++.+++++|
T Consensus       109 ~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~s~~~~~~l  187 (384)
T PRK06348        109 ILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALIT-SKTKAIILNSPNNPTGAVFSKETLEEI  187 (384)
T ss_pred             hcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhC-cCccEEEEeCCCCCCCcCCCHHHHHHH
Confidence            9999999999999999999999999999999985  3567799999999886 689999999999999999999999988


Q ss_pred             HcC----CCeEEEccCCccccCCCc--hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCC
Q 014594          244 LEM----PILVVLDEAYTEFSGLES--RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNV  314 (422)
Q Consensus       244 ~~~----~~~li~Deay~~~~~~~~--~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~  314 (422)
                      ++.    +++||+||+|.+|.++..  ....+. ..+++++++||||.||++|+|+||+++++++++.+.....  .++.
T Consensus       188 ~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~~~~~~~~~~~~~~  267 (384)
T PRK06348        188 AKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYIIETAKIINEGICFSA  267 (384)
T ss_pred             HHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecCHHHHHHHHHHHHhccCCC
Confidence            764    999999999999876432  222222 2578999999999999999999999999999998887664  4788


Q ss_pred             cHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCccc-CCCceEEEEEeCC-CCCHHHHHHHHH-hCCcEE
Q 014594          315 SVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPY-PSYSNFILCEVTS-GMDAKKLKDDLA-KMGVMI  389 (422)
Q Consensus       315 ~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~f~~~~~~~-~~~~~~~~~~L~-~~gI~v  389 (422)
                      +.+.|.++..+|.+ +.+++ .++.++++++.+.+.|++++.+.+. |.+++|+|++++. +.++.++++.|+ ++||.+
T Consensus       268 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v  347 (384)
T PRK06348        268 PTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAFINIKKTGLSSVEFCEKLLKEAHVLV  347 (384)
T ss_pred             CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEE
Confidence            99999999999977 45677 8888999999999999987555544 5577889999974 578899999886 689999


Q ss_pred             EeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          390 RHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       390 ~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      .+|..++  .++++||+++.+  .+++.+++++|+
T Consensus       348 ~pg~~f~~~~~~~iRi~~~~~--~~~l~~al~~l~  380 (384)
T PRK06348        348 IPGKAFGESGEGYIRLACTVG--IEVLEEAFNRIE  380 (384)
T ss_pred             cCchhhccCCCCeEEEEecCC--HHHHHHHHHHHH
Confidence            9988743  358999999853  478999998873

>PRK08068 transaminase; Reviewed

Probab=100.00  E-value=3.6e-47  Score=373.50  Aligned_cols=327  Identities=24%  Similarity=0.273  Sum_probs=271.4

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCC-CcchHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHH
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYP-DPESRRLRAALAKDS----G--LESD-HILVGCGADELIDL  161 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y~-~~~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~~  161 (422)
                      .+.++++|+.|.+++++++.+.+++.+. .  ....|+ ..|..+||+++++++    |  ++++ +|++|+|+++++..
T Consensus        30 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~  109 (389)
T PRK08068         30 EGHDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVE  109 (389)
T ss_pred             cCCCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHH
Confidence            3457899999988888788888887652 2  235784 568999999999997    4  5777 89999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~  239 (422)
                      ++..++++||+|+++.|+|..|...++..|++++.++.+.  ++.+|++++++.+. .++++|++||||||||.+++.++
T Consensus       110 ~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~P~NPTG~~~s~~~  188 (389)
T PRK08068        110 LPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVA-EKAKLMYLNYPNNPTGAVATKAF  188 (389)
T ss_pred             HHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhcc-ccceEEEEECCCCCCCCcCCHHH
Confidence            9999999999999999999999999999999999999753  57789999999986 68999999999999999999999


Q ss_pred             HHHHHcC----CCeEEEccCCccccCCC-ch---hhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC
Q 014594          240 LLKILEM----PILVVLDEAYTEFSGLE-SR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (422)
Q Consensus       240 l~~i~~~----~~~li~Deay~~~~~~~-~~---~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~  311 (422)
                      +++|++.    ++++|+||+|.++.+++ ..   ....+..+++++++||||.||++|+|+||+++++++++.+.+....
T Consensus       189 ~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~l~~~~~~  268 (389)
T PRK08068        189 FEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNESVIEAINLLQDH  268 (389)
T ss_pred             HHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecCHHHHHHHHHHHhh
Confidence            9998763    99999999999877543 21   2222335688999999999999999999999999999999887766


Q ss_pred             CC--CcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-hCC
Q 014594          312 YN--VSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMG  386 (422)
Q Consensus       312 ~~--~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~g  386 (422)
                      +.  .++..|.++..++.+ .++++ .++.++++++.+.+.|+++++....|.+++|+|++++++.+++++.+.|+ ++|
T Consensus       269 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~g  348 (389)
T PRK08068        269 LFVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREIGWEVDAPKGSFFAWMPVPKGYTSEQFADLLLEKAH  348 (389)
T ss_pred             ccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeEEEEEECCCCCCHHHHHHHHHHhCC
Confidence            54  445577777777754 57777 89999999999999999987433345667889999987778899999998 479


Q ss_pred             cEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          387 VMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       387 I~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      |.++++..++  .++++||+++.++  +++.+++++|+
T Consensus       349 i~v~pg~~f~~~~~~~iRi~~~~~~--~~l~~al~~l~  384 (389)
T PRK08068        349 VAVAPGNGFGEHGEGYVRVGLLTDE--ERLREAVERIG  384 (389)
T ss_pred             EEEecchHhCccCCCeEEEEEcCCH--HHHHHHHHHHH
Confidence            9999987643  3679999998653  78999998863

>PLN02187 rooty/superroot1

Probab=100.00  E-value=1.1e-46  Score=375.46  Aligned_cols=326  Identities=21%  Similarity=0.317  Sum_probs=267.5

Q ss_pred             CCCCeEEcCCCCCC----CCCCHHHHHHHhc-CC--CCCCC-CCcchHHHHHHHHHHc------CCCCCCEEEeCCHHHH
Q 014594           93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADEL  158 (422)
Q Consensus        93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~y-~~~~~~~lr~~la~~~------~~~~~~i~~~~G~~~a  158 (422)
                      ++.++|+|+.|+++    +.+++++.+++.+ +.  ....| |..|..+||+++|+++      ++++++|++|+|++++
T Consensus        64 ~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~a  143 (462)
T PLN02187         64 VNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQG  143 (462)
T ss_pred             CCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHH
Confidence            45789999999887    5567788887765 22  23568 6668999999999997      3689999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (422)
Q Consensus       159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (422)
                      +.+++.++++|||+|+++.|+|+.|...++..|++++.++.  +++|++|+++++++++ .++++++++|||||||.+++
T Consensus       144 l~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~-~~~~~v~i~nP~NPTG~v~s  222 (462)
T PLN02187        144 IEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIAD-ENTVAMVVINPNNPCGNVYS  222 (462)
T ss_pred             HHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcC-CCcEEEEEeCCCCCCCCccC
Confidence            99999999999999999999999999999999999999985  3578999999999886 68999999999999999999


Q ss_pred             HHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecC-HH----HHHH
Q 014594          237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LS----IIEY  304 (422)
Q Consensus       237 ~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~----~~~~  304 (422)
                      .+++++|++.    +++||+||+|.++.+++.   .+..+....++++++||||.|+++|+|+||++++ ++    +++.
T Consensus       223 ~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~  302 (462)
T PLN02187        223 HDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKV  302 (462)
T ss_pred             HHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHH
Confidence            9999988764    999999999999876432   2223333356999999999999999999999983 32    3345


Q ss_pred             HHHhcCCC----CCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCc--ccCCCceEEEEEeCC----
Q 014594          305 LWRAKQPY----NVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTS----  371 (422)
Q Consensus       305 l~~~~~~~----~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~f~~~~~~~----  371 (422)
                      +......+    +++.+.|.++.++|++  .+|++ .++.++++++.+.+.|++++...  ..|++++|+|++++.    
T Consensus       303 ~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~~  382 (462)
T PLN02187        303 LQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMD  382 (462)
T ss_pred             HHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhhCC
Confidence            55555543    3478999999999974  46788 89999999999999999987543  257889999998752    


Q ss_pred             CC-CHHHHHHHH-HhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          372 GM-DAKKLKDDL-AKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       372 ~~-~~~~~~~~L-~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +. +..+++..+ .++||.+++|..++..+||||+++.++  +.|.+++++|
T Consensus       383 ~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~~~--e~l~~al~rL  432 (462)
T PLN02187        383 NIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGVEA--HMLEDALERL  432 (462)
T ss_pred             CCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCCCH--HHHHHHHHHH
Confidence            22 455666555 599999999988777899999999864  6688888876

>PRK06207 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.2e-46  Score=370.89  Aligned_cols=325  Identities=16%  Similarity=0.260  Sum_probs=270.9

Q ss_pred             CCCeEEcCCCCCC-CCCCHHHHHHHhc-CC--CCCCCCC-cchHHHHHHHHHHc----C--CCC-CCEEEeCCHHHHHHH
Q 014594           94 PEDIVKIDANENP-YGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDS----G--LES-DHILVGCGADELIDL  161 (422)
Q Consensus        94 ~~~~i~l~~~~~~-~~~~~~v~~al~~-~~--~~~~y~~-~~~~~lr~~la~~~----~--~~~-~~i~~~~G~~~al~~  161 (422)
                      +.+.++|+.+++. +++++.+.+++.+ +.  ...+|++ .|..+||+++++++    |  +++ ++|++|+|+++++..
T Consensus        38 ~~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~  117 (405)
T PRK06207         38 PGRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFL  117 (405)
T ss_pred             CCCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHH
Confidence            5678999998765 5677888877765 22  2256865 47899999998886    6  466 899999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-----CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-----SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-----~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (422)
                      ++++++++||+|+++.|+|..+...++..|++++.++.+     +++++|++++++.++ .++++|+++|||||||.+++
T Consensus       118 ~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~-~~~k~v~l~~P~NPTG~~~s  196 (405)
T PRK06207        118 AVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFK-AGVRVFLFSNPNNPAGVVYS  196 (405)
T ss_pred             HHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhh-hcCeEEEECCCCCCCCcCCC
Confidence            999999999999999999999999999999999999864     368899999999987 57999999999999999999


Q ss_pred             HHHHHHHHcC----CCeEEEccCCccccCCCch---hhhh-hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh
Q 014594          237 DEDLLKILEM----PILVVLDEAYTEFSGLESR---MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA  308 (422)
Q Consensus       237 ~e~l~~i~~~----~~~li~Deay~~~~~~~~~---~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~  308 (422)
                      .+++++|++.    +++||+||+|.+|.+++..   ...+ ...+++++++||||.|+++|+|+||+++++++++.+...
T Consensus       197 ~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~l~~~~~~~  276 (405)
T PRK06207        197 AEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSPAIIDRMEKL  276 (405)
T ss_pred             HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCHHHHHHHHHH
Confidence            9998888764    9999999999998764321   1111 246899999999999999999999999999999999877


Q ss_pred             cCC--CCCcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC-CCCHHHHHHHH
Q 014594          309 KQP--YNVSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKLKDDL  382 (422)
Q Consensus       309 ~~~--~~~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~-~~~~~~~~~~L  382 (422)
                      ...  .+.+.+.|.++..+|+++ +|++ ..+.++++++.+.+.|++++.+.+ .|++|+|+|+++++ ..++.++.+.|
T Consensus       277 ~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~~~~~~~~~~~l  356 (405)
T PRK06207        277 QAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRLAVSLHDFVKIL  356 (405)
T ss_pred             HhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCcccCCCHHHHHHHH
Confidence            654  456778999999999864 6777 777888899999999988754554 46789999999985 45788999999


Q ss_pred             H-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          383 A-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       383 ~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      + ++||.+.+|..+  ..++++||+++.+  .++|.+++++|
T Consensus       357 ~~~~gV~v~pG~~F~~~~~~~~Ris~~~~--~~~l~~al~rl  396 (405)
T PRK06207        357 RLQAGVIVTPGTEFSPHTADSIRLNFSQD--HAAAVAAAERI  396 (405)
T ss_pred             HHhcCEEEeCchHhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            7 789999998864  3468999999974  37788888876

>PLN00175 aminotransferase family protein; Provisional

Probab=100.00  E-value=2.7e-46  Score=368.95  Aligned_cols=325  Identities=22%  Similarity=0.360  Sum_probs=273.2

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCCc-chHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR  164 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y~~~-~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~~~~~  164 (422)
                      .++|+|+.|.+++++++.+.+++.+ +.. ...|+++ |..+||+++++++    |  ++++ +|++|+|+++++..++.
T Consensus        54 ~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~  133 (413)
T PLN00175         54 HGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATIL  133 (413)
T ss_pred             CCeEecCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHH
Confidence            4689999999999989988888876 222 3678654 8999999999987    3  5676 79999999999999999


Q ss_pred             HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (422)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i  243 (422)
                      +++++||+|++++|+|..|...++..|++++.++.+ +++.+|++.+++.+. .++|+|+++|||||||.+++.+++++|
T Consensus       134 ~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~-~~~k~i~i~~p~NPtG~~~s~~~l~~l  212 (413)
T PLN00175        134 GLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFT-SKTRAILINTPHNPTGKMFTREELELI  212 (413)
T ss_pred             HhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcC-cCceEEEecCCCCCCCcCCCHHHHHHH
Confidence            999999999999999999999999999999999964 458899999999997 689999999999999999999998888


Q ss_pred             HcC----CCeEEEccCCccccCCCch--hhhh-hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCC
Q 014594          244 LEM----PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNV  314 (422)
Q Consensus       244 ~~~----~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~  314 (422)
                      ++.    ++++|+||+|.++.+++..  ...+ ...+++|+++||||.|+++|+|+||+++++++++.+.....  .+++
T Consensus       213 ~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l~~~l~~~~~~~~~~~  292 (413)
T PLN00175        213 ASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFAT  292 (413)
T ss_pred             HHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHHHHHHHHHHhhccCCC
Confidence            764    9999999999998764422  2222 23578999999999999999999999999999998887664  4788


Q ss_pred             cHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC-CC-CHHHHHHHHH-hCCcEE
Q 014594          315 SVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GM-DAKKLKDDLA-KMGVMI  389 (422)
Q Consensus       315 ~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~-~~-~~~~~~~~L~-~~gI~v  389 (422)
                      +.+.|.++.++|+++ .|++ .++.++++++.+.+.|++++.....|.+++|+|+++++ +. +..++++.|+ ++||.+
T Consensus       293 s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v  372 (413)
T PLN00175        293 ATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEVGFKVYPSSGTYFVMVDHTPFGFENDIAFCEYLIEEVGVAA  372 (413)
T ss_pred             CHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEE
Confidence            999999999999875 6777 89999999999999999886333456778899999842 43 5788998887 679999


Q ss_pred             EeCCCC-----CCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          390 RHYNNK-----ELKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       390 ~~~~~~-----~~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      .|+..+     ...+++||+++.+  .++|.+++++|+
T Consensus       373 ~pg~~F~~~~~~~~~~iRls~~~~--~e~l~~~~~rL~  408 (413)
T PLN00175        373 IPPSVFYLNPEDGKNLVRFAFCKD--EETLRAAVERMK  408 (413)
T ss_pred             eCchHhCCCCCCCCCEEEEEEcCC--HHHHHHHHHHHH
Confidence            998753     2357999999964  477999988863

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=100.00  E-value=6.8e-47  Score=372.05  Aligned_cols=323  Identities=22%  Similarity=0.333  Sum_probs=271.2

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHc--------CCCCC-CEEEeCCHHHHHHH
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS--------GLESD-HILVGCGADELIDL  161 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~-~~~~lr~~la~~~--------~~~~~-~i~~~~G~~~al~~  161 (422)
                      .+.++++|+.|++++++++.+.+++.+ ......|+++ |..+||+++++++        +++++ +|++|+|+++++..
T Consensus        26 ~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~  105 (393)
T TIGR03538        26 ASKPPIALSIGEPKHPTPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFA  105 (393)
T ss_pred             cCCCeEEecCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHH
Confidence            346789999999999999999999886 3344678665 7899999999997        36674 89999999999999


Q ss_pred             HHHHhcCCCCE--EEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594          162 IMRCVLDPGDK--IVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (422)
Q Consensus       162 ~~~~l~~~gd~--Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (422)
                      ++++++++||.  |+++.|+|..|...++..|++++.++.+  +++.+|++++++.+. .++|+|+++|||||||.+++.
T Consensus       106 ~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~~p~NPtG~~~s~  184 (393)
T TIGR03538       106 FAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVW-RRCQLLFVCSPGNPTGAVLSL  184 (393)
T ss_pred             HHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHh-hcceEEEEeCCCCCcCcccCH
Confidence            99999999986  9999999999999999999999999963  457899999999886 589999999999999999999


Q ss_pred             HHHHHHHcC----CCeEEEccCCccccCCC--ch---hhh---h--hcCCcEEEEccChhhhccccccceeeecCHHHHH
Q 014594          238 EDLLKILEM----PILVVLDEAYTEFSGLE--SR---MEW---V--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (422)
Q Consensus       238 e~l~~i~~~----~~~li~Deay~~~~~~~--~~---~~~---~--~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~  303 (422)
                      +++++|++.    +++||+||+|.++.+++  ..   ...   .  ...+++++++||||.|+++|+|+||+++++++++
T Consensus       185 ~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l~~  264 (393)
T TIGR03538       185 DTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEILK  264 (393)
T ss_pred             HHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecCHHHHH
Confidence            999988764    99999999999987542  11   111   1  1357899999999999999999999999999999


Q ss_pred             HHHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHH
Q 014594          304 YLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD  380 (422)
Q Consensus       304 ~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~  380 (422)
                      .+.+...  .++++.+.|.++.+.+.+.++++ .++.++++++.+.+.|+++ .....|++|+|+|+++|  .+..++.+
T Consensus       265 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~p~gg~f~~~~~~--~~~~~~~~  341 (393)
T TIGR03538       265 AFLRYRTYHGCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV-LDLELPDAGFYLWPKVP--GDDEAFAR  341 (393)
T ss_pred             HHHHHHHhhccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh-CcccCCCeeEEEEEECC--CCHHHHHH
Confidence            8887665  35778899999888898778888 8899999999999999875 11246889999999997  46788998


Q ss_pred             HHH-hCCcEEEeCCCCC--------CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          381 DLA-KMGVMIRHYNNKE--------LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       381 ~L~-~~gI~v~~~~~~~--------~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .|. ++||.+.+|..+.        ..+++||+++..  .+++.+++++|
T Consensus       342 ~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~--~~~l~~~l~~l  389 (393)
T TIGR03538       342 ALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAP--LEECVEAAERI  389 (393)
T ss_pred             HHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCC--HHHHHHHHHHH
Confidence            886 6899999887632        257999999864  36788888876

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=100.00  E-value=2.4e-46  Score=362.37  Aligned_cols=322  Identities=43%  Similarity=0.732  Sum_probs=282.0

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK  172 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~  172 (422)
                      +.++|+|+.|+++++++|.+++++.+. .....|+++...++|+++++++++++++|++|+|+++++..++.+++++||+
T Consensus        18 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~~~gd~   97 (346)
T TIGR01141        18 GKEVIKLNSNENPFGPPPKAKEALRAEADKLHRYPDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAFLEPGDA   97 (346)
T ss_pred             CCceEEccCCCCCCCCCHHHHHHHHHhHHHhhcCCCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhcCCCCE
Confidence            467999999999999999999999874 3336788776799999999999998899999999999999999999999999


Q ss_pred             EEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC---CCe
Q 014594          173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PIL  249 (422)
Q Consensus       173 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~---~~~  249 (422)
                      |+++.|+|+.+...++..|++++.++.+.++.+|++++++.+. +++++|++++|+||||.+++.+++.++++.   +++
T Consensus        98 v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~  176 (346)
T TIGR01141        98 VLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAID-DKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDAL  176 (346)
T ss_pred             EEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcC-CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcE
Confidence            9999999999988888999999999987777899999999875 689999999999999999999999999986   899


Q ss_pred             EEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccCC
Q 014594          250 VVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP  329 (422)
Q Consensus       250 li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~  329 (422)
                      +|+||+|.++.............+++++++|+||.||++|+|+||+++++++++++.....+++.+.+.|.++.+++++.
T Consensus       177 ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  256 (346)
T TIGR01141       177 VVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRAPFNLSRLAQAAAIAALRDD  256 (346)
T ss_pred             EEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhccCCCCCCHHHHHHHHHHhCCH
Confidence            99999999877543333334445678999999999999999999999999999999888778899999999999999887


Q ss_pred             hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEEecC
Q 014594          330 IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVGK  407 (422)
Q Consensus       330 ~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~-~~~~~iRis~~~  407 (422)
                      ++.+ .+++++++++.+.+.|++++++.+.|..++|+|++++.  +++++.+.|.++||.+.++..+ ..++++||++++
T Consensus       257 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~--~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~~  334 (346)
T TIGR01141       257 DFIEKTVEEINAERERLYDGLKKLPGLEVYPSDANFVLIRFPR--DADALFEALLEKGIIVRDLNSYPGLPNCLRITVGT  334 (346)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCEECCCcCCEEEEecCC--CHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecCC
Confidence            7777 88999999999999999885556677789999999974  7889999999999999998763 237899999998


Q ss_pred             hhhHHHHHHHH
Q 014594          408 PEHTDALMECL  418 (422)
Q Consensus       408 ~~~~~~l~~al  418 (422)
                      +++++++.++|
T Consensus       335 ~~~i~~~~~~l  345 (346)
T TIGR01141       335 REENDRFLAAL  345 (346)
T ss_pred             HHHHHHHHHHh
Confidence            77777666655

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=1.6e-46  Score=370.61  Aligned_cols=327  Identities=18%  Similarity=0.227  Sum_probs=269.7

Q ss_pred             CCCCeEEcCCCCCC----CCCCHHHHHHHhc-CCC--CCCC-CCcchHHHHHHHHHHc------CCCCCCEEEeCCHHHH
Q 014594           93 KPEDIVKIDANENP----YGPPPEVREALGQ-LKF--PYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADEL  158 (422)
Q Consensus        93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~~--~~~y-~~~~~~~lr~~la~~~------~~~~~~i~~~~G~~~a  158 (422)
                      .+.++|+|+.|+++    +++++.+.+++.+ +..  ...| |..|..+||+++++++      ++++++|++|+|++++
T Consensus        30 ~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~a  109 (409)
T PLN00143         30 DHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHA  109 (409)
T ss_pred             CCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHH
Confidence            45789999999998    8999999988876 322  2568 6678999999999997      4688999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (422)
Q Consensus       159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (422)
                      +.+++++++++||.|+++.|+|+.|...++..|++++.++.  ++++.+|+++++++++ .++++++++|||||||.+++
T Consensus       110 l~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~~~~~nP~NPTG~~~s  188 (409)
T PLN00143        110 AEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIAD-ENTIAMVIINPGNPCGSVYS  188 (409)
T ss_pred             HHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcc-cCCEEEEEECCCCCCCCccC
Confidence            99999999999999999999999999999999999999985  3567899999999886 68899999999999999999


Q ss_pred             HHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecC-H-HH------
Q 014594          237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-L-SI------  301 (422)
Q Consensus       237 ~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~-~~------  301 (422)
                      .+++++|++.    +++||+||+|.+|.+++.   ....+...+++++++||||.|+++|+|+||++++ + .+      
T Consensus       189 ~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~  268 (409)
T PLN00143        189 YEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEI  268 (409)
T ss_pred             HHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHH
Confidence            9999998764    999999999999886432   2233445578999999999999999999999983 3 33      


Q ss_pred             HHHHHHhcCC-CCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCc--ccCCCceEEEEEeCC----
Q 014594          302 IEYLWRAKQP-YNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTS----  371 (422)
Q Consensus       302 ~~~l~~~~~~-~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~f~~~~~~~----  371 (422)
                      ++.+.+.... ...+.+.|.++.++|++  .+|.+ .++.++++++.+.+.|++++...  ..|.+|+|+|++++.    
T Consensus       269 ~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~~~~  348 (409)
T PLN00143        269 ADSIKKALNPAPFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLLLE  348 (409)
T ss_pred             HHHHHHHHhccCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecchhhcC
Confidence            3444444332 23478899999999975  36777 88899999999999999876443  247789999999973    


Q ss_pred             C-CCHHHHHHHH-HhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          372 G-MDAKKLKDDL-AKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       372 ~-~~~~~~~~~L-~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      + .+..+++..+ .++||.+++|..++.++++||+++.+  .+++.+++++|+
T Consensus       349 ~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~~--~~~l~~al~rl~  399 (409)
T PLN00143        349 DIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAVE--QSSLEDGLGRLK  399 (409)
T ss_pred             CCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcCC--HHHHHHHHHHHH
Confidence            2 2566776555 58999999998877789999999975  377999988863

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=100.00  E-value=2.1e-46  Score=379.80  Aligned_cols=352  Identities=21%  Similarity=0.277  Sum_probs=270.7

Q ss_pred             HHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCC---CCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHH
Q 014594           67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANEN---PYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKD  141 (422)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~-~~~~~~y~~~-~~~~lr~~la~~  141 (422)
                      .++.+..+.++ ....+...+.+....+.++|+|+.|++   .+++|+++.+++.+ +.....|++. |..+||++++++
T Consensus       119 ~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~~~Y~~~~G~~~lReaia~~  197 (517)
T PRK13355        119 KSHKLDNVLYD-VRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQY  197 (517)
T ss_pred             hhHHhhccCcc-HHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCcChHHHHHHHHHH
Confidence            45555555543 222233344555555678999999765   46668888888875 3344679766 799999999999


Q ss_pred             c------CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHH
Q 014594          142 S------GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADA  213 (422)
Q Consensus       142 ~------~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~  213 (422)
                      +      ++++++|++|+|+++++.+++.+++++||+|+++.|+|+.|...++..|++++.++.+  .+|.+|++++++.
T Consensus       198 ~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~  277 (517)
T PRK13355        198 AQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSK  277 (517)
T ss_pred             HHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHh
Confidence            8      6789999999999999999999999999999999999999999999999999999853  4588999999999


Q ss_pred             hhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhc
Q 014594          214 VEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAG  286 (422)
Q Consensus       214 i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~  286 (422)
                      +. +++|+|+++|||||||.+++.+++++|++.    +++||+||+|.+|.+++.   .+........+++++||||.|+
T Consensus       278 ~~-~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~  356 (517)
T PRK13355        278 IT-SRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHM  356 (517)
T ss_pred             cC-cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhcc
Confidence            86 789999999999999999999888888764    899999999999886532   2222222234677899999999


Q ss_pred             cccccceeeec--CHH----HHHHHHHhcCC-CCCcHHHHHHHHHHccCC----hHHHHHHHHHHHHHHHHHHHccCCCC
Q 014594          287 LAGLRVGYGAF--PLS----IIEYLWRAKQP-YNVSVAAEVAACAALQNP----IYLEVKEALIKERERLFKLLKDVPFL  355 (422)
Q Consensus       287 ~~G~r~G~i~~--~~~----~~~~l~~~~~~-~~~~~~~~~aa~~~L~~~----~~~~~~~~~~~~~~~l~~~L~~~~~~  355 (422)
                      ++|+|+||+++  +++    +++.+...... ++.+.++|.++..+|.+.    +++...+++.++|+++.+.|++++++
T Consensus       357 ~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~  436 (517)
T PRK13355        357 IAGYRIGWMILSGNKRIAKDYIEGLNMLANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAIPGI  436 (517)
T ss_pred             CcccceEEEEeeCchhhHHHHHHHHHHHhcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence            99999999995  444    34444433333 678899999999999753    23332234556789999999998555


Q ss_pred             c-ccCCCceEEEEEeCCC----CCHHHHHHH-HHhCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          356 N-PYPSYSNFILCEVTSG----MDAKKLKDD-LAKMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       356 ~-~~p~~~~f~~~~~~~~----~~~~~~~~~-L~~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      . ..|.+++|+|++++.+    .+..+++.. |.++||.+++|..++  .++||||+++..  .++|.+++++|+
T Consensus       437 ~~~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~--~~~l~~a~~rl~  509 (517)
T PRK13355        437 SAVKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPR--LEDLEDAMDRLA  509 (517)
T ss_pred             ccCCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCCC--HHHHHHHHHHHH
Confidence            5 4566778889898642    245555544 558999999988753  578999999754  377999988863

>PRK07324 transaminase; Validated

Probab=100.00  E-value=1.2e-46  Score=367.16  Aligned_cols=331  Identities=22%  Similarity=0.231  Sum_probs=277.8

Q ss_pred             HHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCC-cchHHHHHHHHHHcC-CCCCCEEEeCCHHHHHHHHH
Q 014594           88 IQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKDSG-LESDHILVGCGADELIDLIM  163 (422)
Q Consensus        88 ~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~~-~~~~~lr~~la~~~~-~~~~~i~~~~G~~~al~~~~  163 (422)
                      ++++..+.++++|+.+++.+.+++.+ +++.+ +. ....|+. .|..+||++++++++ +++++|++|+|+++++.+++
T Consensus        19 ~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~   97 (373)
T PRK07324         19 ATYDIAESCIDSLTLEELLALAGKNP-EAFYQELGQKKLTYGWIEGSPEFKEAVASLYQNVKPENILQTNGATGANFLVL   97 (373)
T ss_pred             CccccccCCCCCCcHHHHHhccCcch-HHHHHHHhcCCccCCCCCCCHHHHHHHHHHhcCCChhhEEEcCChHHHHHHHH
Confidence            34555678899999999988887777 55543 22 2356744 589999999999984 78899999999999999999


Q ss_pred             HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (422)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~  241 (422)
                      .+++++||+|+++.|+|..+...++..|++++.++.+  .++.+|++++++.+. +++|+|++++||||||.+++.++++
T Consensus        98 ~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~-~~~kli~i~~p~NPtG~~~~~~~l~  176 (373)
T PRK07324         98 YALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVR-PNTKLICINNANNPTGALMDRAYLE  176 (373)
T ss_pred             HHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCC-CCCcEEEEeCCCCCCCCCCCHHHHH
Confidence            9999999999999999999999999999999999964  456789999999886 6899999999999999999977777


Q ss_pred             HHHc---C-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--CCCc
Q 014594          242 KILE---M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVS  315 (422)
Q Consensus       242 ~i~~---~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~~~~  315 (422)
                      +|++   . |+++|+||+|.++.+++.........+++|+++||||.||++|+|+||+++++++++.+.+.+..  ++.+
T Consensus       177 ~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~~~~~~~~~~~  256 (373)
T PRK07324        177 EIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANEEVIDILRKYRDYTMICAG  256 (373)
T ss_pred             HHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecCHHHHHHHHHHhCcEEecCC
Confidence            7765   3 99999999999987654333333346788999999999999999999999999999999888764  5678


Q ss_pred             HHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEe
Q 014594          316 VAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRH  391 (422)
Q Consensus       316 ~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~~  391 (422)
                      .+.|.++..+|++. .+++ .++.++++++.+.+.|++.+.+. +.|.+|+|+|+.++.+.+..+++++|+ ++||.+.|
T Consensus       257 ~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~~~~~~~~~~ll~~~gv~v~p  336 (373)
T PRK07324        257 VFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVDMPSEDFCLKLLKETGVLLVP  336 (373)
T ss_pred             hHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCCCCHHHHHHHHHHhcCEEEEC
Confidence            89999999999864 4566 88889999999999998876554 567788888988876678889999876 78999999


Q ss_pred             CCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          392 YNNKELKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       392 ~~~~~~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      |..++.++++||+++..  .+.|.+++++|+
T Consensus       337 g~~F~~~~~iRis~~~~--~~~l~~~l~rl~  365 (373)
T PRK07324        337 GNRFDLEGHVRIGYCCD--TETLKKGLKKLS  365 (373)
T ss_pred             ccccCCCCeEEEEecCC--HHHHHHHHHHHH
Confidence            98877789999999975  377999998863

>PRK07908 hypothetical protein; Provisional

Probab=100.00  E-value=4.5e-46  Score=360.61  Aligned_cols=315  Identities=25%  Similarity=0.357  Sum_probs=269.3

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD  171 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd  171 (422)
                      ..+++||+.|+|++++++.+++++.+ +.....||++ |..++|+++++++++++++|++|+|+++++.++++  +++| 
T Consensus        21 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~--l~~~-   97 (349)
T PRK07908         21 GPGLLDFAVNVRHDTPPEWLRERLAARLGDLAAYPSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR--LRPR-   97 (349)
T ss_pred             CCCeEEecCCCCCCCCCHHHHHHHHHHhhHhhcCCCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh--cCCC-
Confidence            46789999999999999999999886 3334678765 88999999999999999999999999999999998  4664 


Q ss_pred             EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcCCCeEE
Q 014594          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVV  251 (422)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~~~~li  251 (422)
                      .++++.|+|..+...++..|++++.++.+.++.+|++.+    . .++++++++|||||||.+++.+++.++++.+.++|
T Consensus        98 ~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~l----~-~~~~~i~l~np~NPTG~~~~~~~l~~l~~~~~~iI  172 (349)
T PRK07908         98 RAAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPAAV----P-DDADLVVIGNPTNPTSVLHPAEQLLALRRPGRILV  172 (349)
T ss_pred             eEEEeCCCChHHHHHHHHcCCEEEeeccCcccCcChhHh----c-cCCCEEEEcCCCCCCCCCcCHHHHHHHHhcCCEEE
Confidence            577789999999988999999999999876688998855    3 57899999999999999999999999998888999


Q ss_pred             EccCCccccCCCc-hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccCC-
Q 014594          252 LDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP-  329 (422)
Q Consensus       252 ~Deay~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~-  329 (422)
                      +||+|.+|..+.. .+.. ...+++++++||||.|+++|+|+||+++++++++.+......++.+++.+.++..++++. 
T Consensus       173 vDe~y~~~~~~~~~~l~~-~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~  251 (349)
T PRK07908        173 VDEAFADAVPGEPESLAG-DDLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAHWPVGTLQLEAIAACCAPRA  251 (349)
T ss_pred             EECcchhhccCCcccccc-ccCCCEEEEeecccccCCccceeeeeecCHHHHHHHHhcCCCCCccHHHHHHHHHHhcccc
Confidence            9999998764321 1111 245689999999999999999999999999999999888778889999888888888743 


Q ss_pred             -hHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCC--CCCeEEEE
Q 014594          330 -IYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE--LKGYVRVS  404 (422)
Q Consensus       330 -~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~--~~~~iRis  404 (422)
                       ++++ .+++++++++++.+.|++++ +. ..|++++|+|+++++   .+.+.+.|+++||.++++..+.  .+++|||+
T Consensus       252 ~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~p~~g~~~~~~~~~---~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis  327 (349)
T PRK07908        252 VAEAAADAARLAADRAEMVAGLRAVG-ARVVDPAAAPFVLVRVPD---AELLRKRLRERGIAVRRGDTFPGLDPDYLRLA  327 (349)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhCC-cEeccCCCceEEEEECCc---HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEE
Confidence             5666 88899999999999999885 44 345899999999973   6788888889999999987643  36899999


Q ss_pred             ecChhhHHHHHHHHhhh
Q 014594          405 VGKPEHTDALMECLMHL  421 (422)
Q Consensus       405 ~~~~~~~~~l~~al~~l  421 (422)
                      ++.++++++|.++++++
T Consensus       328 ~~~~~~~~~l~~al~~~  344 (349)
T PRK07908        328 VRPRAEVPVLVQALAEI  344 (349)
T ss_pred             eCCCccHHHHHHHHHHH
Confidence            99988999999999875

>PRK03321 putative aminotransferase; Provisional

Probab=100.00  E-value=3.1e-46  Score=362.30  Aligned_cols=319  Identities=34%  Similarity=0.590  Sum_probs=276.6

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEE
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI  173 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~V  173 (422)
                      .++|+|+.|++++++++.+.+++.+. .....||+.|..++|+++++++++++++|++|+|+++++..++..++++||+|
T Consensus        22 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~~~gd~V  101 (352)
T PRK03321         22 PGAIKLSSNETPFGPLPSVRAAIARAAAGVNRYPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAGPGDEV  101 (352)
T ss_pred             ccceeccCCCCCCCCCHHHHHHHHHHHHhcCcCCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhcCCCCEE
Confidence            35799999999999999999998763 33366888899999999999999999999999999999999999999999999


Q ss_pred             EEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC---CCeE
Q 014594          174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILV  250 (422)
Q Consensus       174 l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~---~~~l  250 (422)
                      +++.|+|..|...++..|++++.++.+.++++|++.+++.++ .++++++++|||||||.+++.+++.++++.   ++++
T Consensus       102 li~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~i  180 (352)
T PRK03321        102 IFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAIT-DRTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLV  180 (352)
T ss_pred             EeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhc-cCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEE
Confidence            999999999988888899999999986567899999999997 689999999999999999999999999985   8999


Q ss_pred             EEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHcc
Q 014594          251 VLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ  327 (422)
Q Consensus       251 i~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~  327 (422)
                      |+||+|.+|.+++.   ........+++++++||||.||++|+|+||+++++++++.+.+....++.+.+.|.++.++|.
T Consensus       181 i~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~~~~s~~~q~~a~~~l~  260 (352)
T PRK03321        181 VLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKVAVPFSVNSLAQAAAIASLA  260 (352)
T ss_pred             EEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHhcCCCCCCHHHHHHHHHHhc
Confidence            99999999876442   223344567899999999999999999999999999999999887789999999999999987


Q ss_pred             CC-hHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014594          328 NP-IYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG  406 (422)
Q Consensus       328 ~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~  406 (422)
                      .. .+.+..+++.++++.+.+.|++.++ .+.+.+|+|+|++++  .+..++.+.|.++||.++++.    .+++||+++
T Consensus       261 ~~~~~~~~~~~~~~~r~~~~~~L~~~~~-~~~~~~g~~i~i~l~--~~~~~~~~~l~~~gI~v~~~~----~~~iRi~~~  333 (352)
T PRK03321        261 AEDELLERVDAVVAERDRVRAALRAAGW-TVPPSQANFVWLPLG--ERTADFAAAAAEAGVVVRPFA----GEGVRVTIG  333 (352)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCCCCCEEEEeCC--CCHHHHHHHHHHCCEEEEccC----CCcEEEeeC
Confidence            64 4444555666777889999998764 445667899999985  367889999999999999853    357999999


Q ss_pred             ChhhHHHHHHHHhhh
Q 014594          407 KPEHTDALMECLMHL  421 (422)
Q Consensus       407 ~~~~~~~l~~al~~l  421 (422)
                      ..++++++.++++++
T Consensus       334 ~~~~~~~~~~al~~~  348 (352)
T PRK03321        334 APEENDAFLRAARAW  348 (352)
T ss_pred             CHHHHHHHHHHHHHH
Confidence            999999999999864

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=100.00  E-value=3.8e-46  Score=361.14  Aligned_cols=323  Identities=24%  Similarity=0.372  Sum_probs=270.5

Q ss_pred             eEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc-chHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHHHHHHhc
Q 014594           97 IVKIDANENPYGPPPEVREALGQL-KFPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMRCVL  167 (422)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~~-~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~~~~~~l~  167 (422)
                      +++|+.+.+++++++++.+++.+. .....|+++ |..+||+++++++    |  ++++ +|++|+|+++++..++.+++
T Consensus         2 ~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~   81 (350)
T TIGR03537         2 LFDFGTGDPKEPTPPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFI   81 (350)
T ss_pred             eEeccCCCCCCCCCHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHc
Confidence            589999999999899999998863 344678776 7899999999986    5  4676 99999999999999999999


Q ss_pred             CCC---CEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594          168 DPG---DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (422)
Q Consensus       168 ~~g---d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~  242 (422)
                      ++|   |+|+++.|+|..|...++..|++++.++.+  +++.+|++++++++. .++|++++++||||||.+++.+++++
T Consensus        82 ~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~~~~~~~~  160 (350)
T TIGR03537        82 DPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSIL-EETKIVWINYPHNPTGATAPRSYLKE  160 (350)
T ss_pred             CCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhh-hccEEEEEeCCCCCcCcccCHHHHHH
Confidence            887   699999999999999999999999999974  457789999999987 58999999999999999999888888


Q ss_pred             HHcC----CCeEEEccCCccccCCCchhhhh-hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCC--Cc
Q 014594          243 ILEM----PILVVLDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN--VS  315 (422)
Q Consensus       243 i~~~----~~~li~Deay~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~--~~  315 (422)
                      |++.    ++++|+||+|.++.++....... ...+++++++||||.+|++|+|+||+++++++++.+......++  .+
T Consensus       161 l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~  240 (350)
T TIGR03537       161 TIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLRKLRANFGVASP  240 (350)
T ss_pred             HHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecCHHHHHHHHHHHHhhccCCC
Confidence            8654    99999999999876543222111 13578999999999999999999999999999998887765543  45


Q ss_pred             HHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC
Q 014594          316 VAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN  394 (422)
Q Consensus       316 ~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~  394 (422)
                      .+.|.++.+++.+.+|++ .++.++++++.+.+.|++.+.....|.+++|+|+++|++.++.++++.|.++||.++++..
T Consensus       241 ~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~~g~~~~~~~~~~~~~~~~l~~~L~~~gv~v~~g~~  320 (350)
T TIGR03537       241 DFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKVGLEYLYPDATFYLWVKVPSGIDAKDYALRLLENGIVVAPGEN  320 (350)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeEEEEEEECCCCCCHHHHHHHHHHCCEEEcCchh
Confidence            568888888888888888 8899999999999999988643344566788999998767889999999999999999876


Q ss_pred             CC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          395 KE--LKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       395 ~~--~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      ++  .++++||+++..  .+++.+++++++
T Consensus       321 f~~~~~~~~Ri~~~~~--~~~~~~~l~~~~  348 (350)
T TIGR03537       321 FGSGEEGYVRVALVPT--LEECEEALRLWE  348 (350)
T ss_pred             hCCCCCCEEEEEecCC--HHHHHHHHHHHh
Confidence            43  368999999743  367888888764

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=100.00  E-value=4.7e-46  Score=365.08  Aligned_cols=327  Identities=23%  Similarity=0.344  Sum_probs=272.7

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-chHHHHHHHHHHc----CC--CCC-CEEEeCCHHHHHHH
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDS----GL--ESD-HILVGCGADELIDL  161 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y~~~-~~~~lr~~la~~~----~~--~~~-~i~~~~G~~~al~~  161 (422)
                      .+.++++|+.|++++++++.+.+++.+. .  ...+|+++ |..+||+++++++    |+  +++ +|++|+|+++++..
T Consensus        27 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~  106 (383)
T TIGR03540        27 EGVDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAH  106 (383)
T ss_pred             cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHH
Confidence            3467899999999999899888887752 2  23678765 7899999999986    33  455 69999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~  239 (422)
                      +++.++++||.|+++.|+|+.+...++..|++++.++.+  +++.+|++++++.+. .++++++++|||||||.+++.++
T Consensus       107 ~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~-~~~~~v~i~~P~NPtG~~~~~~~  185 (383)
T TIGR03540       107 IPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIA-KKAKLMFINYPNNPTGAVAPLKF  185 (383)
T ss_pred             HHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhcc-ccceEEEEeCCCCCcCccCCHHH
Confidence            999999999999999999999999999999999999964  356789999999886 68999999999999999999988


Q ss_pred             HHHHHcC----CCeEEEccCCccccCCCc-hh--hhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC
Q 014594          240 LLKILEM----PILVVLDEAYTEFSGLES-RM--EWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (422)
Q Consensus       240 l~~i~~~----~~~li~Deay~~~~~~~~-~~--~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~  311 (422)
                      +++|++.    ++++|+||+|.++.+.+. ..  .... ..+++++++||||.||++|+|+||+++++++++.+......
T Consensus       186 ~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~~l~~~~~~~~~~  265 (383)
T TIGR03540       186 FKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADLIAGLGKVKTN  265 (383)
T ss_pred             HHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCHHHHHHHHHHHHh
Confidence            8888764    899999999998875431 11  1222 24678999999999999999999999999999988876553


Q ss_pred             --CCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-hCC
Q 014594          312 --YNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMG  386 (422)
Q Consensus       312 --~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~g  386 (422)
                        .+.+.+.|.++..+|++ .+|++ .++.++++++.+.+.|+++++....|.+++|+|++++++.+..++++.|+ ++|
T Consensus       266 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~g  345 (383)
T TIGR03540       266 VDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKIGIDVEKPKATFYVWVPVPEGYTSAEFAARLLEETG  345 (383)
T ss_pred             cccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCCcceEEEEECCCCCCHHHHHHHHHHHCC
Confidence              46677889999999987 47887 88999999999999999986333345677889999987778899999876 789


Q ss_pred             cEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          387 VMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       387 I~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      |.++++..+.  .++++||+++.++  +++.+++++|+
T Consensus       346 i~v~~g~~f~~~~~~~~Ris~~~~~--~~l~~~l~~l~  381 (383)
T TIGR03540       346 VVVTPGVGFGEYGEGYIRISLTVPD--ERLEEAVARIK  381 (383)
T ss_pred             EEEecchhhCccCCCeEEEEecCCH--HHHHHHHHHHh
Confidence            9999987643  3579999998653  68999998874

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=7.9e-46  Score=366.97  Aligned_cols=326  Identities=22%  Similarity=0.335  Sum_probs=268.8

Q ss_pred             CCCeEEcCCCCCC----CCCCHHHHHHHhc-CC--CCCCCCCc-chHHHHHHHHHHc------CCCCCCEEEeCCHHHHH
Q 014594           94 PEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGADELI  159 (422)
Q Consensus        94 ~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~y~~~-~~~~lr~~la~~~------~~~~~~i~~~~G~~~al  159 (422)
                      +.++|+|+.|++.    +++++++.+++.+ +.  ....|+.. |..++|+++++++      ++++++|++|+|+++++
T Consensus        51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al  130 (430)
T PLN00145         51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAI  130 (430)
T ss_pred             CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHH
Confidence            5689999999884    7788899888876 32  22578654 8999999999997      35789999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (422)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (422)
                      .++++.++++||+|+++.|+|+.|...+...|++++.++.  +++|.+|++.+++.++ .++++++++|||||||.+++.
T Consensus       131 ~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~P~NPtG~v~~~  209 (430)
T PLN00145        131 EIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALAD-ENTVAMVIINPNNPCGSVYSY  209 (430)
T ss_pred             HHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhC-cCceEEEEeCCCCCCCCCCCH
Confidence            9999999999999999999999999999999999999874  4568899999999887 689999999999999999998


Q ss_pred             HHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeec--CHHHHH-----
Q 014594          238 EDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--PLSIIE-----  303 (422)
Q Consensus       238 e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~--~~~~~~-----  303 (422)
                      +++++|++.    |+++|+||+|.+|.++..   ....+...+++++++||||.|++||||+||+++  ++.+++     
T Consensus       210 ~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~  289 (430)
T PLN00145        210 EHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVV  289 (430)
T ss_pred             HHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHH
Confidence            888888653    999999999999886432   222334467899999999999999999999997  444433     


Q ss_pred             -HHHHhcCCC-CCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCc--ccCCCceEEEEEeCC----C
Q 014594          304 -YLWRAKQPY-NVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTS----G  372 (422)
Q Consensus       304 -~l~~~~~~~-~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~f~~~~~~~----~  372 (422)
                       .+....... +.+.+.|.++..+|++  .+|++ .++.++++++.+.+.|++++.+.  ..|++++|+|++++.    +
T Consensus       290 ~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~~~  369 (430)
T PLN00145        290 DSIRNYLNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLSG  369 (430)
T ss_pred             HHHHHHhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChhhcCC
Confidence             344443333 4678999999999986  36777 89999999999999999986554  358999999999863    2


Q ss_pred             -CCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          373 -MDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       373 -~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                       .+..+++..|+ ++||.+.||..++.++|+||+++.+  .+.|.+++++|+
T Consensus       370 ~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~~--~~~l~~al~rl~  419 (430)
T PLN00145        370 IKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAID--PPSLEDGLERLK  419 (430)
T ss_pred             CCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCC--HHHHHHHHHHHH
Confidence             25677876665 7899999998877889999999964  477999988863

>PRK07337 aminotransferase; Validated

Probab=100.00  E-value=6.8e-46  Score=364.47  Aligned_cols=330  Identities=23%  Similarity=0.343  Sum_probs=275.2

Q ss_pred             hCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCCc-chHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHH
Q 014594           90 LGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCGADELID  160 (422)
Q Consensus        90 ~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~~~-~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al~  160 (422)
                      ....+.++++|+.+++++++++.+.+++.+ +. ....|++. |..+||+++++++    |  +++++|++|+|+++++.
T Consensus        25 ~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~  104 (388)
T PRK07337         25 LERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALL  104 (388)
T ss_pred             HHhcCCCEEEeCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHH
Confidence            333456789999999999888988888876 32 23568655 7899999999986    3  57899999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHH
Q 014594          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (422)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e  238 (422)
                      .++..++++||+|+++.|+|..+...++..|++++.++.+  +++.+|++++++.+. +++++|++++||||||.+++.+
T Consensus       105 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~  183 (388)
T PRK07337        105 LACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWG-ERTRGVLLASPSNPTGTSIAPD  183 (388)
T ss_pred             HHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcC-ccceEEEEECCCCCCCcCcCHH
Confidence            9999999999999999999999988888899999999964  357899999999987 6899999999999999999999


Q ss_pred             HHHHHHcC----CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--C
Q 014594          239 DLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--Y  312 (422)
Q Consensus       239 ~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~  312 (422)
                      ++++|++.    ++++|+||+|.++.+++.........+++++++||||.||++|+|+||+++++++++.+.+....  .
T Consensus       184 ~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~~~~~~~~  263 (388)
T PRK07337        184 ELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVPEALVGTFEKLAQNLFI  263 (388)
T ss_pred             HHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeecCHHHHHHHHHHHHHhcc
Confidence            98888763    89999999999887654322223335788999999999999999999999999999998877654  4


Q ss_pred             CCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCC-----CCCHHHHHHHHH
Q 014594          313 NVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS-----GMDAKKLKDDLA  383 (422)
Q Consensus       313 ~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~-----~~~~~~~~~~L~  383 (422)
                      +.+.+.|.++..++.++  .+.. .++.++++++.+.+.|++++... ..|++|+|+|++++.     ..++.++++.|.
T Consensus       264 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll  343 (388)
T PRK07337        264 CASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAML  343 (388)
T ss_pred             CCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCeeEEEEEecccccCCCCCCHHHHHHHHH
Confidence            67889999999999754  3445 78889999999999999876433 468899999999974     247788887755


Q ss_pred             -hCCcEEEeCCCCC---CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          384 -KMGVMIRHYNNKE---LKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       384 -~~gI~v~~~~~~~---~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                       ++||.+.+|..++   .++++||+++.+  .++|.+++++|.
T Consensus       344 ~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~--~~~l~~~l~rl~  384 (388)
T PRK07337        344 HDAGVVLVPGRDFGPHAPRDYIRLSYATS--MSRLEEAVARLG  384 (388)
T ss_pred             HhCCEEEeCchhhCCCCCCCEEEEEecCC--HHHHHHHHHHHH
Confidence             8899999987643   358999999974  478999998873

>PRK05942 aspartate aminotransferase; Provisional

Probab=100.00  E-value=5.9e-46  Score=365.38  Aligned_cols=327  Identities=25%  Similarity=0.315  Sum_probs=268.3

Q ss_pred             CCCCCeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCc-chHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHH
Q 014594           92 RKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELID  160 (422)
Q Consensus        92 ~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~~-~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~  160 (422)
                      ..+.++++|+.+.++.++++++.+++.+ +.  ....|+++ |.++||+++++++    +  ++++ +|++|+|+++++.
T Consensus        32 ~~g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~  111 (394)
T PRK05942         32 EQGLDLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLT  111 (394)
T ss_pred             hcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHH
Confidence            3455689999987777666667666543 22  23678765 7899999999987    4  4677 5999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHH
Q 014594          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (422)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e  238 (422)
                      .++.+++++||+|+++.|+|+.+...+...|++++.++.+  .+|.+|++++++.+. +++|+|+++|||||||.+++.+
T Consensus       112 ~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~~P~NPtG~~~s~~  190 (394)
T PRK05942        112 HLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVA-QQAKILYFNYPSNPTTATAPRE  190 (394)
T ss_pred             HHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhcc-ccceEEEEcCCCCCCCCcCCHH
Confidence            9999999999999999999999988888899999999864  457799999999986 6899999999999999999998


Q ss_pred             HHHHHHcC----CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC
Q 014594          239 DLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ  310 (422)
Q Consensus       239 ~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~  310 (422)
                      ++++|++.    ++++|+||+|.+|.+++.   ....+. ..+++++++||||.||++|+|+||+++++++++.+.....
T Consensus       191 ~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l~~~~~  270 (394)
T PRK05942        191 FFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGLRTLKT  270 (394)
T ss_pred             HHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCHHHHHHHHHHHh
Confidence            88888653    999999999999876432   222222 2456789999999999999999999999999999987765


Q ss_pred             --CCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-hC
Q 014594          311 --PYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KM  385 (422)
Q Consensus       311 --~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~  385 (422)
                        .++.+.+.|.++..+|+. .++++ .+++++++++.+.+.|+++++....|.+++|+|++++.+.++.++...++ ++
T Consensus       271 ~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~  350 (394)
T PRK05942        271 NLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGELGWNIPPTKATMYLWVPCPVGMGSTDFALNVLQKT  350 (394)
T ss_pred             hcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeeEEEEECCCCCCHHHHHHHHHHHC
Confidence              477888999999999975 46777 88999999999999999886433345667799999987677788887655 89


Q ss_pred             CcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          386 GVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       386 gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ||.+.++..+  ...+++||+++.+  .++|.++++++
T Consensus       351 gV~v~~g~~f~~~~~~~iRis~~~~--~~~l~~~l~~l  386 (394)
T PRK05942        351 GVVVTPGNAFGEGGEGYVRISLIAD--CDRLGEALDRL  386 (394)
T ss_pred             CEEEeCChhhCcCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            9999998764  3368999999853  58899999886

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=100.00  E-value=8.9e-46  Score=365.91  Aligned_cols=326  Identities=19%  Similarity=0.282  Sum_probs=272.0

Q ss_pred             CCCCeEEcCCCCCC----CCCCHHHHHHHhc-CC--CCCCCCCc-chHHHHHHHHHHcC------------CCCCCEEEe
Q 014594           93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIYPDP-ESRRLRAALAKDSG------------LESDHILVG  152 (422)
Q Consensus        93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~y~~~-~~~~lr~~la~~~~------------~~~~~i~~~  152 (422)
                      .+.++|+|+.|.++    +.+++.+.+++.+ +.  ....|+++ |..+||++++++++            +++++|++|
T Consensus        31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it  110 (412)
T PTZ00433         31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLC  110 (412)
T ss_pred             CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEe
Confidence            45688999999876    5678888888876 32  23679776 79999999999975            678999999


Q ss_pred             CCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCc
Q 014594          153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNP  230 (422)
Q Consensus       153 ~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NP  230 (422)
                      +|+++++.+++.+++++||+|+++.|+|..+...++..|++++.++.+  .++++|++++++.++ .++++|+++|||||
T Consensus       111 ~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~NP  189 (412)
T PTZ00433        111 SGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVD-DRTKALIMTNPSNP  189 (412)
T ss_pred             CChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhc-cCceEEEEeCCCCC
Confidence            999999999999999999999999999999999999999999999863  467999999999887 58999999999999


Q ss_pred             cCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeec------
Q 014594          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF------  297 (422)
Q Consensus       231 tG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~------  297 (422)
                      ||.+++.+++++|++.    |++||+||+|.+|.+++.   ....+....++++++||||.||++|+|+||+++      
T Consensus       190 tG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~  269 (412)
T PTZ00433        190 CGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGN  269 (412)
T ss_pred             CCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCccc
Confidence            9999999999888764    999999999999876432   222222334689999999999999999999997      


Q ss_pred             CHHHHHHHHHhcC-CCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCC
Q 014594          298 PLSIIEYLWRAKQ-PYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSG  372 (422)
Q Consensus       298 ~~~~~~~l~~~~~-~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~  372 (422)
                      ++++++.+.+... .++++.+.|.++..+|.+  .+|++ .++.++++++.+.+.|+++..+. ..|++|+|+|++++..
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f~~~~l~~~  349 (412)
T PTZ00433        270 GGDFLDGMKRLGMLVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMFLMSRLDLE  349 (412)
T ss_pred             HHHHHHHHHHHhhccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEEEEEEechh
Confidence            2467777776654 368899999999999976  46777 88999999999999998864344 4577899999999741


Q ss_pred             -----CCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          373 -----MDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       373 -----~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                           .++.++++.|+ ++||.++++..++..+++||+++.++  +.+.+++++|
T Consensus       350 ~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~~~--e~l~~al~~l  402 (412)
T PTZ00433        350 KFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISRPV--EVLREAVERI  402 (412)
T ss_pred             hcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecCCH--HHHHHHHHHH
Confidence                 25788999987 68999999987767899999999763  6688888876

>PLN02656 tyrosine transaminase

Probab=100.00  E-value=8.7e-46  Score=365.47  Aligned_cols=327  Identities=20%  Similarity=0.277  Sum_probs=272.9

Q ss_pred             CCCCeEEcCCCCCC----CCCCHHHHHHHhc-CC--CCCCC-CCcchHHHHHHHHHHcC------CCCCCEEEeCCHHHH
Q 014594           93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADEL  158 (422)
Q Consensus        93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~y-~~~~~~~lr~~la~~~~------~~~~~i~~~~G~~~a  158 (422)
                      .+.++|+|+.|++.    +++++.+++++.+ +.  ....| |..|..++|++++++++      +++++|++|+|++++
T Consensus        29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a  108 (409)
T PLN02656         29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQA  108 (409)
T ss_pred             cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHH
Confidence            45789999999997    8889999998876 32  23578 55689999999999973      678999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (422)
Q Consensus       159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (422)
                      +..++.+++++||+|++++|+|+.|...++..|++++.++..  +++.+|++.+++.++ .++++++++|||||||.+++
T Consensus       109 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~P~NPtG~~~s  187 (409)
T PLN02656        109 IDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALAD-QNTVALVIINPGNPCGNVYS  187 (409)
T ss_pred             HHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhc-cCceEEEEECCCCCCCCCCC
Confidence            999999999999999999999999988888899999999863  467899999999886 67899999999999999999


Q ss_pred             HHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecC--------HHH
Q 014594          237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP--------LSI  301 (422)
Q Consensus       237 ~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~--------~~~  301 (422)
                      .+++++|++.    ++++|+||+|.+|.+++.   ....+...+++++++||||.|+++|+|+||++++        +++
T Consensus       188 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~  267 (409)
T PLN02656        188 YQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKI  267 (409)
T ss_pred             HHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEeCcccccccHHH
Confidence            9999888764    999999999999886542   2223344578999999999999999999999983        578


Q ss_pred             HHHHHHhcCC-CCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCc--ccCCCceEEEEEeCCC---
Q 014594          302 IEYLWRAKQP-YNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTSG---  372 (422)
Q Consensus       302 ~~~l~~~~~~-~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~f~~~~~~~~---  372 (422)
                      ++.+.+.... .+++.+.|.++..+|++  ..|++ .++.++++++.+.+.|++++...  ..|++|+|+|++++..   
T Consensus       268 ~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~~~~  347 (409)
T PLN02656        268 VERIKKYFDILGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSLLE  347 (409)
T ss_pred             HHHHHHHHhhhcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecchhhcC
Confidence            8888766554 35788999999999975  35777 88899999999999999876433  3578899999998621   


Q ss_pred             --CCHHHHH-HHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          373 --MDAKKLK-DDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       373 --~~~~~~~-~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                        .+..++. +.|.++||.+.+|..++.++++||+++.+  .++|.+++++|+
T Consensus       348 ~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~~--~e~l~eal~rl~  398 (409)
T PLN02656        348 DISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAAD--PSSLEEALGRIK  398 (409)
T ss_pred             CCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCCC--HHHHHHHHHHHH
Confidence              2344554 55668999999998877789999999974  478999998873

>PRK09148 aminotransferase; Validated

Probab=100.00  E-value=1.2e-45  Score=364.12  Aligned_cols=326  Identities=21%  Similarity=0.307  Sum_probs=265.9

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-chHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHH
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDL  161 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y~~~-~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~~  161 (422)
                      .+.++|+|+.|++++++++.+.+++.+. .  ....|+++ |..+||+++++++    |  ++++ +|++|+|+++++..
T Consensus        28 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~  107 (405)
T PRK09148         28 AGADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFAN  107 (405)
T ss_pred             cCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHH
Confidence            4467899999999998888888887752 2  23678665 7899999999987    4  4676 89999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCC--CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~  239 (422)
                      ++..++++||+|++++|+|..|...++..|++++.++.+.+  +..++++..+... ++++++++++||||||.+++.++
T Consensus       108 ~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~-~~~~~v~l~~P~NPtG~~~s~~~  186 (405)
T PRK09148        108 MAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSI-PKPIALIVNYPSNPTAYVADLDF  186 (405)
T ss_pred             HHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhcc-ccceEEEEeCCCCCCCcCCCHHH
Confidence            99999999999999999999999888999999999996433  3334444433332 57899999999999999999998


Q ss_pred             HHHHHcC----CCeEEEccCCccccCCCch---hhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC-
Q 014594          240 LLKILEM----PILVVLDEAYTEFSGLESR---MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-  310 (422)
Q Consensus       240 l~~i~~~----~~~li~Deay~~~~~~~~~---~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~-  310 (422)
                      +++|++.    +++||+||+|.+|.++...   ..... ..+++++++||||.||++|+|+||+++++++++.+.+.+. 
T Consensus       187 l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~~~i~~l~~~~~~  266 (405)
T PRK09148        187 YKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNERLIAALTRVKSY  266 (405)
T ss_pred             HHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCCHHHHHHHHHHHHH
Confidence            8888764    9999999999998764321   22222 2356789999999999999999999999999999987765 


Q ss_pred             -CCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCC---CCHHHHHHHHH-
Q 014594          311 -PYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG---MDAKKLKDDLA-  383 (422)
Q Consensus       311 -~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~---~~~~~~~~~L~-  383 (422)
                       .++.+.+.|.++..+|++ ..+++ .++.++++++.+.+.|+++++....|++|+|+|+++|+.   .+..++.+.|. 
T Consensus       267 ~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~  346 (405)
T PRK09148        267 LDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRAGWDIPPPAASMFAWAPIPEAFRHLGSLEFSKLLVE  346 (405)
T ss_pred             hccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCCeeEEEEEECCCccCCCCHHHHHHHHHH
Confidence             467889999999999986 46777 889999999999999998875334578899999999853   24678888876 


Q ss_pred             hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          384 KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       384 ~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ++||.++++..++  .++|+||+++.  +.+++.+++++|
T Consensus       347 ~~gV~v~pg~~f~~~~~~~~Ri~~~~--~~~~l~~al~~l  384 (405)
T PRK09148        347 KADVAVAPGVGFGEHGDGYVRIALVE--NEQRIRQAARNI  384 (405)
T ss_pred             hCCEEEeCchhhCCCCCCeEEEEecC--CHHHHHHHHHHH
Confidence            7899999987643  35899999984  358899998876

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=100.00  E-value=3.5e-46  Score=371.07  Aligned_cols=321  Identities=19%  Similarity=0.232  Sum_probs=264.9

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc-chHHHHHHHHHHcC--C-CCCCEEEeCCHHHHHHHHHHHhcCC
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDP-ESRRLRAALAKDSG--L-ESDHILVGCGADELIDLIMRCVLDP  169 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~~-~~~~lr~~la~~~~--~-~~~~i~~~~G~~~al~~~~~~l~~~  169 (422)
                      ..+++|+.+.++.+++|.+.+++.+. .....|+++ |..+||++++++++  + .+++|++|+|+++++..+++++++|
T Consensus        85 ~~~i~L~~g~p~~~~~p~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~p  164 (431)
T PRK15481         85 TPLHDLAGGNPDPQRLPDLSRYFARLSRTPRLYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLLP  164 (431)
T ss_pred             chhhhhhcCCCChhHhHHHHHHHHHhhhhhhhcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCCC
Confidence            35689999987777767777877763 223568765 67899999999986  3 3569999999999999999999999


Q ss_pred             CCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEe-CCCCccCcCCCHHHHHHHHc---
Q 014594          170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILE---  245 (422)
Q Consensus       170 gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~e~l~~i~~---  245 (422)
                      ||.|++++|+|..|...++..|++++.++.+++ ++|++.++++++ .++|+++++ |||||||.+++.+++++|++   
T Consensus       165 gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-g~~~~~l~~~~~-~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~  242 (431)
T PRK15481        165 GDSVAVEDPCFLSSINMLRYAGFSASPVSVDAE-GMQPEKLERALA-QGARAVILTPRAHNPTGCSLSARRAAALRNLLA  242 (431)
T ss_pred             CCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC-CCCHHHHHHHHh-cCCCEEEECCCCCCCCCccCCHHHHHHHHHHHH
Confidence            999999999999999999999999999998544 699999999997 589999998 99999999999996666654   


Q ss_pred             -C-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--CCCcHHHHHH
Q 014594          246 -M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVA  321 (422)
Q Consensus       246 -~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a  321 (422)
                       . +++||+||+|.+|.+.+.........+++++++||||.|+ +|+|+||+++++++++.+......  +++|.+.|.+
T Consensus       243 ~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~~~~~~~~~~~~~~~~s~~~q~a  321 (431)
T PRK15481        243 RYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALG-PDLRLAFVASDSATSARLRLRLNSGTQWVSHLLQDL  321 (431)
T ss_pred             hcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccC-CCceeEEEeCCHHHHHHHHHHHhccccCCCHHHHHH
Confidence             3 8899999999998754321111113578999999999999 999999999999999998765544  5689999999


Q ss_pred             HHHHccCChH---HH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCC
Q 014594          322 ACAALQNPIY---LE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKEL  397 (422)
Q Consensus       322 a~~~L~~~~~---~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~  397 (422)
                      +..+|+++++   ++ .++.++++++.+.+.|++++.....|++|+|+|++++.  +.+++.+.|.++||.+.+|..+..
T Consensus       322 ~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~p~gg~f~~~~l~~--~~~~~~~~l~~~gV~v~pg~~f~~  399 (431)
T PRK15481        322 VYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAIPSPGDGLNLWLPLDT--DSQATALTLAKSGWLVREGEAFGV  399 (431)
T ss_pred             HHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCeEEEEEECCC--CHHHHHHHHHHCCcEEecCCcccc
Confidence            9999998754   56 88899999999999999886433478999999999974  578899999999999999876432


Q ss_pred             ---CCeEEEEecChhhHHHHHHHHhhh
Q 014594          398 ---KGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       398 ---~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                         .+++||+++...+ +++.+++++|
T Consensus       400 ~~~~~~iRis~~~~~~-~~i~~~~~~l  425 (431)
T PRK15481        400 SAPSHGLRITLSTLND-AEINRLAADL  425 (431)
T ss_pred             CCCCCeEEEEcCCCCh-HHHHHHHHHH
Confidence               4689999997542 5677776665

>PRK05839 hypothetical protein; Provisional

Probab=100.00  E-value=8.5e-46  Score=361.47  Aligned_cols=323  Identities=21%  Similarity=0.294  Sum_probs=263.4

Q ss_pred             HHHHHhCCC-CCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHc----C--CCCCCEEEeCCH
Q 014594           85 VLSIQLGRK-PEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCGA  155 (422)
Q Consensus        85 ~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~-~~~~lr~~la~~~----~--~~~~~i~~~~G~  155 (422)
                      .+..++..+ +.++++|+.|++++++++.+.+++.+ ......|+++ |..+||+++++++    |  +++++|++|+|+
T Consensus        13 ~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~   92 (374)
T PRK05839         13 ELLKEITPNKEYKGLDLTIGEPQFETPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGT   92 (374)
T ss_pred             HHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCc
Confidence            344444444 55899999999999999999888876 3344678766 7889999998775    5  689999999999


Q ss_pred             HHHHHHHHHHhc--CCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCcc
Q 014594          156 DELIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPD  231 (422)
Q Consensus       156 ~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt  231 (422)
                      ++++..++..++  ++||.|+++.|+|..|...++..|++++.++.+  +++.+|++..+  +  .++|+++++||||||
T Consensus        93 ~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~--~~~k~v~i~nP~NPT  168 (374)
T PRK05839         93 REVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L--QEVDLVILNSPNNPT  168 (374)
T ss_pred             HHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h--ccccEEEEeCCCCCc
Confidence            999999988764  478999999999999999999999999999974  34666654432  3  468999999999999


Q ss_pred             CcCCCHHHHHHHHcC----CCeEEEccCCccccCCCch---hhh-----hhcCCcEEEEccChhhhccccccceeeecCH
Q 014594          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR---MEW-----VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (422)
Q Consensus       232 G~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~---~~~-----~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~  299 (422)
                      |.+++.+++++|++.    |+++|+||+|.+|.++...   ...     ...++++++++||||.|+++|+|+||+++++
T Consensus       169 G~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~  248 (374)
T PRK05839        169 GRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDA  248 (374)
T ss_pred             CcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCH
Confidence            999999999999864    9999999999998643322   111     1234799999999999999999999999999


Q ss_pred             HHHHHHHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHH
Q 014594          300 SIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAK  376 (422)
Q Consensus       300 ~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~  376 (422)
                      ++++++.+...  .++.+.+.|.++..++.+.++++ .++.++++++.+.+.|..    . .|++|+|+|++++   +..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~----~-~p~gg~fi~~~~~---~~~  320 (374)
T PRK05839        249 SILKKYKAYRTYLGCASPLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREILGI----T-IPPATFYVWLPVD---NDE  320 (374)
T ss_pred             HHHHHHHHHHhhcCCCCChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhcCC----C-CCCeeEEEEEeCC---ChH
Confidence            99999887654  36778889999988888888888 888999999988887632    2 6789999999996   467


Q ss_pred             HHHHHHH-hCCcEEEeCCCCC----CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          377 KLKDDLA-KMGVMIRHYNNKE----LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       377 ~~~~~L~-~~gI~v~~~~~~~----~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ++++.|. ++||.++++..++    .++|+||+++.+  .+++.+++++|
T Consensus       321 ~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~--~~~~~~~l~~l  368 (374)
T PRK05839        321 EFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYD--TPKLEKALEII  368 (374)
T ss_pred             HHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            8888887 5999999976533    258999999864  47788888876

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=3.5e-46  Score=372.51  Aligned_cols=326  Identities=19%  Similarity=0.273  Sum_probs=262.5

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhcC-C-------------CCCCCCCc-chHHHHHHHHHHcC--------CCCCCEE
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQL-K-------------FPYIYPDP-ESRRLRAALAKDSG--------LESDHIL  150 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~-------------~~~~y~~~-~~~~lr~~la~~~~--------~~~~~i~  150 (422)
                      +..+|+|+.+||++.. +.+.+.+... .             ....|+++ |..+||++++++++        +++++|+
T Consensus        37 p~g~i~L~~~En~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Ii  115 (468)
T PLN02450         37 PSGIIQMGLAENQLSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLV  115 (468)
T ss_pred             CCeeEEeehhHhHhhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeE
Confidence            4568999999999976 6666666542 1             12448776 78899999999973        5889999


Q ss_pred             EeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH-HcCCEEEEecC--CCCCCCCHHHHHHHhhc-----CCCeEE
Q 014594          151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPR--KSDFSLNVELIADAVER-----EKPKCI  222 (422)
Q Consensus       151 ~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~--~~~~~~d~~~l~~~i~~-----~~~~~i  222 (422)
                      +|+|+++++..++.++++|||.|+++.|+|+.|...+. ..|++++.++.  ++++.+|++++++++.+     .++|+|
T Consensus       116 it~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v  195 (468)
T PLN02450        116 LTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGV  195 (468)
T ss_pred             EccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEE
Confidence            99999999999999999999999999999999987777 48999999996  46788899999998753     378999


Q ss_pred             EEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC-c---hhhhhh--------cCCcEEEEccChhhhc
Q 014594          223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-S---RMEWVK--------KHDNLIVLRTFSKRAG  286 (422)
Q Consensus       223 ~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~-~---~~~~~~--------~~~~~i~~~S~SK~~~  286 (422)
                      ++||||||||.+++.+++++|++.    +++||+||+|.++.+.+ .   ......        ..+++++++||||.|+
T Consensus       196 ~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~  275 (468)
T PLN02450        196 LITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLG  275 (468)
T ss_pred             EEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCC
Confidence            999999999999999999998874    99999999999876543 1   122211        3578999999999999


Q ss_pred             cccccceeeecCHH-HHHHHHHhcCCCCCcHHHHHHHHHHccCCh----HHH-HHHHHHHHHHHHHHHHccCCCCcccCC
Q 014594          287 LAGLRVGYGAFPLS-IIEYLWRAKQPYNVSVAAEVAACAALQNPI----YLE-VKEALIKERERLFKLLKDVPFLNPYPS  360 (422)
Q Consensus       287 ~~G~r~G~i~~~~~-~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~----~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~  360 (422)
                      ++|+|+||++++++ +++.+.+....+.++.+.|.++..+|++++    +++ .+++++++++.+.+.|++++.....+.
T Consensus       276 l~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~gi~~~~~~  355 (468)
T PLN02450        276 LPGFRVGAIYSNDEMVVSAATKMSSFGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAGIKCLKSN  355 (468)
T ss_pred             CCCccEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Confidence            99999999999754 566666654445679999999999999874    556 888999999999999999864334566


Q ss_pred             CceEEEEEeCCCCC------HHHHHHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          361 YSNFILCEVTSGMD------AKKLKDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       361 ~~~f~~~~~~~~~~------~~~~~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +|+|+|++++...+      ..++.+.|. ++||.+.||..+.  .++|+||+|+..++ +.+.+++++|
T Consensus       356 ~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~-~~l~~~l~ri  424 (468)
T PLN02450        356 AGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSE-ETLDLAMKRL  424 (468)
T ss_pred             ceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCH-HHHHHHHHHH
Confidence            78899999974322      245666766 6899999998743  46899999996332 6688887776

>PRK12414 putative aminotransferase; Provisional

Probab=100.00  E-value=1.9e-45  Score=360.49  Aligned_cols=325  Identities=21%  Similarity=0.339  Sum_probs=268.7

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-C-CCCCC-CCcchHHHHHHHHHHc----CCC--C-CCEEEeCCHHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIY-PDPESRRLRAALAKDS----GLE--S-DHILVGCGADELIDLIMR  164 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~y-~~~~~~~lr~~la~~~----~~~--~-~~i~~~~G~~~al~~~~~  164 (422)
                      .++|+|+.|++++++++.+.+++.+. . ....| |..|..+||+++++++    |++  + ++|++|+|+++++..+++
T Consensus        29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~  108 (384)
T PRK12414         29 HDALNLSQGAPNFAPDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAIS  108 (384)
T ss_pred             CCeEEcCCCCCCCCCCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHH
Confidence            46899999999999999998888762 2 22568 4558899999999874    653  3 689999999999999999


Q ss_pred             HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (422)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i  243 (422)
                      +++++||+|+++.|+|..+...++..|++++.++.+ +++.+|++.+++.++ .++|+|+++|||||||.+++.+++++|
T Consensus       109 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~NPTG~~~s~~~~~~i  187 (384)
T PRK12414        109 ALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAIT-PRTRMIIVNTPHNPSATVFSAADLARL  187 (384)
T ss_pred             HhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcC-cccEEEEEcCCCCCCCcCCCHHHHHHH
Confidence            999999999999999999999999999999999975 467899999999997 689999999999999999999999888


Q ss_pred             HcC----CCeEEEccCCccccCCCch---hhhh-hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCC
Q 014594          244 LEM----PILVVLDEAYTEFSGLESR---MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN  313 (422)
Q Consensus       244 ~~~----~~~li~Deay~~~~~~~~~---~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~  313 (422)
                      ++.    ++++|+||+|.++.+++..   .... ...+++++++||||.||++|+|+||+++++++++.+.+...  .++
T Consensus       188 ~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~~l~~~~~~~~~~  267 (384)
T PRK12414        188 AQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELMDEIRKVHQFMVFS  267 (384)
T ss_pred             HHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHHHHHHHHHHHhheecC
Confidence            753    9999999999998764321   1111 22468999999999999999999999999999999887764  578


Q ss_pred             CcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC--CCCHHHHH-HHHHhCCcEE
Q 014594          314 VSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS--GMDAKKLK-DDLAKMGVMI  389 (422)
Q Consensus       314 ~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~--~~~~~~~~-~~L~~~gI~v  389 (422)
                      .+.+.|.++..+|+++.+.. .++.++++++.+.+.|+++++....+.+++|+|+++++  ..+..+++ +.|.++||.+
T Consensus       268 ~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v  347 (384)
T PRK12414        268 ADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGSRFELLPSEGSFFMLARFRHFSDESDSDFVLRLIRDARVAT  347 (384)
T ss_pred             CCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhCCCeecCCCcceEEEEcccccCCCCHHHHHHHHHHhCCEEE
Confidence            89999999999998876555 78889999999999999986333345677889988864  23455666 4556899999


Q ss_pred             EeCCCCC----CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          390 RHYNNKE----LKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       390 ~~~~~~~----~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      .++..+.    ..+++||+++.+  .+++.+++++|.
T Consensus       348 ~pg~~f~~~~~~~~~iRis~~~~--~~~~~~~~~rl~  382 (384)
T PRK12414        348 IPLSAFYTDGTDTGLIRLSFSKD--DATLVEGARRLC  382 (384)
T ss_pred             ecchhhcCCCCCCCEEEEEecCC--HHHHHHHHHHHh
Confidence            9987632    257999999975  488999999874

>PRK07682 hypothetical protein; Validated

Probab=100.00  E-value=1.4e-45  Score=361.18  Aligned_cols=324  Identities=24%  Similarity=0.390  Sum_probs=271.0

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCC-CcchHHHHHHHHHHcC------CCCC-CEEEeCCHHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYP-DPESRRLRAALAKDSG------LESD-HILVGCGADELIDLIMR  164 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~-~~~~~~lr~~la~~~~------~~~~-~i~~~~G~~~al~~~~~  164 (422)
                      .++|+|+.|++++++++.+.+++.+ +. ....|+ ..|..+||++++++++      ++++ +|++|+|+++++.++++
T Consensus        20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~   99 (378)
T PRK07682         20 EGVISLGVGEPDFVTPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMR   99 (378)
T ss_pred             CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence            4579999999999988888887765 22 225685 4689999999999973      4555 79999999999999999


Q ss_pred             HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (422)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~  242 (422)
                      +++++||+|++++|+|+.|...++..|++++.++.+  +++++|++++++++. ++++++++++||||||.+++.+++++
T Consensus       100 ~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~NPtG~~~s~~~~~~  178 (378)
T PRK07682        100 AIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAIT-AKTKAILLCSPNNPTGAVLNKSELEE  178 (378)
T ss_pred             HhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcC-cccEEEEEECCCCCcCcCcCHHHHHH
Confidence            999999999999999999999999999999999853  468999999999987 68999999999999999999998888


Q ss_pred             HHcC----CCeEEEccCCccccCCCch--hhh-hhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCC
Q 014594          243 ILEM----PILVVLDEAYTEFSGLESR--MEW-VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN  313 (422)
Q Consensus       243 i~~~----~~~li~Deay~~~~~~~~~--~~~-~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~  313 (422)
                      |++.    ++++|+||+|.+|.+++..  ... .+..+++++++||||.|+++|+|+||+++++++++.+.....  .++
T Consensus       179 l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~~~~~~~~  258 (378)
T PRK07682        179 IAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKIHQYSMMC  258 (378)
T ss_pred             HHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHHHHHHHHHHHhhccC
Confidence            8764    9999999999999865432  122 223478999999999999999999999999999999876654  356


Q ss_pred             CcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC-CCCHHHHHHHHH-hCCcEE
Q 014594          314 VSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDLA-KMGVMI  389 (422)
Q Consensus       314 ~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~-~~~~~~~~~~L~-~~gI~v  389 (422)
                      .+.+.|.++..+|++. .+++ +++.++++++.+.+.|++++.....|++++|+|++++. +.++.++.+.|+ ++||.+
T Consensus       259 ~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v  338 (378)
T PRK07682        259 APTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEIGLTCHVPGGAFYAFPSISSTGLSSEEFAEQLLLEEKVAV  338 (378)
T ss_pred             CCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHCCCccCCCCeeEEEEEeccCCCCCHHHHHHHHHHhCCEEE
Confidence            8899999999999874 5666 88899999999999999986433457788899998853 568889998876 789999


Q ss_pred             EeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          390 RHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       390 ~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ++|..++  .++++||+++.+  .+++.+++++|
T Consensus       339 ~pg~~f~~~~~~~iRis~~~~--~~~l~~~l~~l  370 (378)
T PRK07682        339 VPGSVFGESGEGFIRCSYATS--LEQLQEAMKRM  370 (378)
T ss_pred             cCchhhCcCCCCeEEEEeCCC--HHHHHHHHHHH
Confidence            9987643  368999999974  36788888776

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=100.00  E-value=2.6e-45  Score=361.78  Aligned_cols=326  Identities=19%  Similarity=0.271  Sum_probs=270.4

Q ss_pred             CCCCeEEcCCCCCC----CCCCHHHHHHHhcC-CC--CCCC-CCcchHHHHHHHHHHcC-----CCCCCEEEeCCHHHHH
Q 014594           93 KPEDIVKIDANENP----YGPPPEVREALGQL-KF--PYIY-PDPESRRLRAALAKDSG-----LESDHILVGCGADELI  159 (422)
Q Consensus        93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~~-~~--~~~y-~~~~~~~lr~~la~~~~-----~~~~~i~~~~G~~~al  159 (422)
                      ++.++++|+.|+++    +++++.+.+++.+. ..  ...| |..|..+||++++++++     +++++|++|+|+++++
T Consensus        29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al  108 (401)
T TIGR01264        29 PEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAI  108 (401)
T ss_pred             cCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHH
Confidence            34678999999874    78889999888762 22  2457 66789999999999986     6889999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (422)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (422)
                      .+++.+++++||+|+++.|+|..|...++..|++++.++.+  +++++|++.+++.++ .++++++++|||||||.+++.
T Consensus       109 ~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~NPtG~~~~~  187 (401)
T TIGR01264       109 EMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLID-EKTAALIVNNPSNPCGSVFSR  187 (401)
T ss_pred             HHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhc-cCceEEEEcCCCCCCCCCCCH
Confidence            99999999999999999999999999999999999998853  457899999999886 578999999999999999999


Q ss_pred             HHHHHHHcC----CCeEEEccCCccccCCC-ch--hhhhhcCCcEEEEccChhhhccccccceeeecCH------HHHHH
Q 014594          238 EDLLKILEM----PILVVLDEAYTEFSGLE-SR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL------SIIEY  304 (422)
Q Consensus       238 e~l~~i~~~----~~~li~Deay~~~~~~~-~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~------~~~~~  304 (422)
                      +++++|++.    ++++|+||+|.+|.+++ ..  ........++|+++||||.|+++|+|+||+++++      ++++.
T Consensus       188 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~  267 (401)
T TIGR01264       188 QHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDG  267 (401)
T ss_pred             HHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHH
Confidence            999888764    99999999999987643 21  2222223358999999999999999999999874      45666


Q ss_pred             HHHhcC-CCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCC-----CCC
Q 014594          305 LWRAKQ-PYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS-----GMD  374 (422)
Q Consensus       305 l~~~~~-~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~-----~~~  374 (422)
                      +..... .++++.+.|.++..+|.+  .+|++ .++.++++++.+.+.|++++++. ..|++|+|+|++++.     ..+
T Consensus       268 ~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~  347 (401)
T TIGR01264       268 LVKLSQRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMYMMVGIEMEHFPEFKN  347 (401)
T ss_pred             HHHHhhccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeEEEEEecccccCCCCC
Confidence            655544 467889999999999976  47777 88999999999999999885454 468899999999752     236


Q ss_pred             HHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          375 AKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       375 ~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ..++++.|+ ++||.++++..+..++++||+++..+  +.+.+++++|
T Consensus       348 ~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~~~--~~l~~~l~rl  393 (401)
T TIGR01264       348 DVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTVPV--VMMEEACSRI  393 (401)
T ss_pred             HHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcCCH--HHHHHHHHHH
Confidence            778888876 89999999887666899999999753  6688888776

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]

Probab=100.00  E-value=2.3e-46  Score=346.34  Aligned_cols=320  Identities=26%  Similarity=0.374  Sum_probs=266.1

Q ss_pred             cCCCCCCCCCCHHHHHHHhcC-CC--CCCC-CCcchHHHHHHHHHHc----C---CCCCCEEEeCCHHHHHHHHHHHhcC
Q 014594          100 IDANENPYGPPPEVREALGQL-KF--PYIY-PDPESRRLRAALAKDS----G---LESDHILVGCGADELIDLIMRCVLD  168 (422)
Q Consensus       100 l~~~~~~~~~~~~v~~al~~~-~~--~~~y-~~~~~~~lr~~la~~~----~---~~~~~i~~~~G~~~al~~~~~~l~~  168 (422)
                      |+.|.+++++|+-+.+++.++ ..  .+.| ++.|.++|+++|++.+    |   .+.++|++|.|+.+++..++..+++
T Consensus        36 LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~  115 (420)
T KOG0257|consen   36 LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLN  115 (420)
T ss_pred             ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcC
Confidence            999999999999999999874 22  2455 6667777777777654    3   2456899999999999999999999


Q ss_pred             CCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--------CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHH
Q 014594          169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--------SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL  240 (422)
Q Consensus       169 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--------~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l  240 (422)
                      +||+|++.+|.|..|....+++|++++.++..        ++|.+|++.++.+++ ++||+|++|+||||||.++++++|
T Consensus       116 ~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t-~kTk~Ii~ntPhNPtGkvfsReeL  194 (420)
T KOG0257|consen  116 PGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKIT-EKTKAIILNTPHNPTGKVFSREEL  194 (420)
T ss_pred             CCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhcc-CCccEEEEeCCCCCcCcccCHHHH
Confidence            99999999999999999999999999999843        578999999999998 799999999999999999999999


Q ss_pred             HHHHcC----CCeEEEccCCccccCCCc----hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC-
Q 014594          241 LKILEM----PILVVLDEAYTEFSGLES----RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-  311 (422)
Q Consensus       241 ~~i~~~----~~~li~Deay~~~~~~~~----~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~-  311 (422)
                      ++|+++    |+++|.||+|..+.+++.    .....+++++++.++||+|.||+.|||+||+++++.++..+...++. 
T Consensus       195 e~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~~~vh~~~  274 (420)
T KOG0257|consen  195 ERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSALFPVHQNF  274 (420)
T ss_pred             HHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHhhhhHHHHhhcc
Confidence            999885    999999999999887663    23445678999999999999999999999999999999998887765 


Q ss_pred             -CCCcHHHHHHHHHHccCC---------hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeC--------CC
Q 014594          312 -YNVSVAAEVAACAALQNP---------IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT--------SG  372 (422)
Q Consensus       312 -~~~~~~~~~aa~~~L~~~---------~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~--------~~  372 (422)
                       +.+++..|.|..+++..+         .+.. +.+.++++|+.|.+.|.+++.....|++++|+|++++        ++
T Consensus       275 ~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~~p~gayyl~adfs~~~~~~~~~~  354 (420)
T KOG0257|consen  275 VFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEELGLKVTGPEGAYYLWADFSLAKSWPFFEE  354 (420)
T ss_pred             ccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCceEEEEeccccccCCcchh
Confidence             677888888887777643         3455 8899999999999999999866678999999999987        11


Q ss_pred             ----CCHHHHHHHHH-hCCcEEEeCCCCCCC-------CeEEEEecChhhHHHHHHHHhhhC
Q 014594          373 ----MDAKKLKDDLA-KMGVMIRHYNNKELK-------GYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       373 ----~~~~~~~~~L~-~~gI~v~~~~~~~~~-------~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                          -+.-.+...|. +.|+.+.|.+.+...       +++|+++...+  +.|..++++++
T Consensus       355 ~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~--~~L~~a~e~l~  414 (420)
T KOG0257|consen  355 ILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKAD--ETLRKAIERLK  414 (420)
T ss_pred             hccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhH--HHHHHHHHHHh
Confidence                13345667776 789999888775443       45666665543  66888887763

>PRK08636 aspartate aminotransferase; Provisional

Probab=100.00  E-value=4.9e-45  Score=359.79  Aligned_cols=334  Identities=19%  Similarity=0.290  Sum_probs=269.3

Q ss_pred             HHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCc-chHHHHHHHHHHc----C--CCCC-CEEEeCCH
Q 014594           87 SIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGA  155 (422)
Q Consensus        87 ~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~~-~~~~lr~~la~~~----~--~~~~-~i~~~~G~  155 (422)
                      +.+....+.++++|+.+.++...++.+.+++.+ ..  ....|++. |..+||+++++++    +  ++++ +|++|+|+
T Consensus        25 ~~~~~~~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~  104 (403)
T PRK08636         25 KMAARRAGEDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGS  104 (403)
T ss_pred             HHHHHhcCCCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCCh
Confidence            334444556789999998887767766666654 32  23678664 8999999999986    5  5666 79999999


Q ss_pred             HHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHH----HHHhhc--CCCeEEEEeCC
Q 014594          156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELI----ADAVER--EKPKCIFLTSP  227 (422)
Q Consensus       156 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l----~~~i~~--~~~~~i~l~~p  227 (422)
                      ++++.+++++++++||.|++++|+|+.+...++..|++++.++.  ++++++|++.+    ++++++  .+++++++|+|
T Consensus       105 ~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P  184 (403)
T PRK08636        105 KEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFP  184 (403)
T ss_pred             HHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCC
Confidence            99999999999999999999999999999999999999999986  45688998754    555542  57899999999


Q ss_pred             CCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhc-CCcEEEEccChhhhccccccceeeecCH
Q 014594          228 NNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (422)
Q Consensus       228 ~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~  299 (422)
                      |||||.+++.+++++|++.    +++||+||+|.++.+++.   .+..++. .+++++++||||.||++|+|+||+++++
T Consensus       185 ~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~  264 (403)
T PRK08636        185 HNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNK  264 (403)
T ss_pred             CCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCCH
Confidence            9999999999999999864    999999999999876532   2222322 3567889999999999999999999999


Q ss_pred             HHHHHHHHhcC--CCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCC---
Q 014594          300 SIIEYLWRAKQ--PYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG---  372 (422)
Q Consensus       300 ~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~---  372 (422)
                      ++++.+.+...  .++.+.+.|.++..+++. .+|++ +++.++++++.+.+.|++.++....|.+|+|+|+++|+.   
T Consensus       265 ~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~g~~~~~~l~~~~~~  344 (403)
T PRK08636        265 KLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFANAGWELQKPRASMFVWAKIPEPARH  344 (403)
T ss_pred             HHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCcceEEEEECCCccCC
Confidence            99999887665  366777888888888764 46777 888999999999999998764334678999999999853   


Q ss_pred             CCHHHHHHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          373 MDAKKLKDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       373 ~~~~~~~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      .++.++.+.++ ++||.+.++..++  .++++||+++.+  .+++.+++++|+
T Consensus       345 ~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~~--~~~l~~~~~rl~  395 (403)
T PRK08636        345 LGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIEN--ENRIRQAARNIK  395 (403)
T ss_pred             CCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecCC--HHHHHHHHHHHH
Confidence            34688887765 7899999987643  358999999843  488999988863

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=9.8e-46  Score=370.49  Aligned_cols=328  Identities=21%  Similarity=0.294  Sum_probs=258.1

Q ss_pred             CCCeEEcCCCCCCC--CC-CHHHHHHHhc----------CCCCCCCCCc-chHHHHHHHHHHcC--------CCCCCEEE
Q 014594           94 PEDIVKIDANENPY--GP-PPEVREALGQ----------LKFPYIYPDP-ESRRLRAALAKDSG--------LESDHILV  151 (422)
Q Consensus        94 ~~~~i~l~~~~~~~--~~-~~~v~~al~~----------~~~~~~y~~~-~~~~lr~~la~~~~--------~~~~~i~~  151 (422)
                      +..+|+|+.+||++  .. .+.+.+....          ......|++. |..+||+++|++++        +++++|++
T Consensus        45 p~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivi  124 (496)
T PLN02376         45 PHGIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVM  124 (496)
T ss_pred             CCceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEE
Confidence            45689999999988  33 3334333221          1111345444 78999999999974        68999999


Q ss_pred             eCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH-HcCCEEEEecCC--CCCCCCHHHHHHHhh-----cCCCeEEE
Q 014594          152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPRK--SDFSLNVELIADAVE-----REKPKCIF  223 (422)
Q Consensus       152 ~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~--~~~~~d~~~l~~~i~-----~~~~~~i~  223 (422)
                      |+|++++++.++.++++|||.|+++.|+|+.|...++ ..|++++.++.+  +++++|++.+++++.     ..++|+|+
T Consensus       125 t~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~  204 (496)
T PLN02376        125 SGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLI  204 (496)
T ss_pred             ccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEE
Confidence            9999999999999999999999999999999988777 489999999973  568999999987642     14789999


Q ss_pred             EeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC-ch---hhhhhc-------CCcEEEEccChhhhccc
Q 014594          224 LTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-SR---MEWVKK-------HDNLIVLRTFSKRAGLA  288 (422)
Q Consensus       224 l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~-~~---~~~~~~-------~~~~i~~~S~SK~~~~~  288 (422)
                      ++|||||||.+++.+++++|++.    +++||+||+|.++.+.+ ..   ......       .+++++++||||.||++
T Consensus       205 l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glp  284 (496)
T PLN02376        205 LTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLP  284 (496)
T ss_pred             EcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCC
Confidence            99999999999999999998874    99999999999987543 11   112111       13567899999999999


Q ss_pred             cccceeeecC-HHHHHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-----HHHHHHHHHHHHHHHHccCCCCcccCCCc
Q 014594          289 GLRVGYGAFP-LSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-----VKEALIKERERLFKLLKDVPFLNPYPSYS  362 (422)
Q Consensus       289 G~r~G~i~~~-~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-----~~~~~~~~~~~l~~~L~~~~~~~~~p~~~  362 (422)
                      |+|+||++++ +.+.+.+......+.++.+.|.++..+|++++|++     .+++++++++.+.+.|++.+.....+.+|
T Consensus       285 GlRvG~li~~~~~l~~~~~~~~~~~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~~aG  364 (496)
T PLN02376        285 GFRVGIVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLTSNAG  364 (496)
T ss_pred             cceEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCce
Confidence            9999999995 56666665555556689999999999999877643     57788999999999999876433457788


Q ss_pred             eEEEEEeCCCC-------CHHHHHHHHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          363 NFILCEVTSGM-------DAKKLKDDLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       363 ~f~~~~~~~~~-------~~~~~~~~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      +|+|++++...       +..++++.|. +.||.+.||..+  ..++|+||+|+..++ ++|.+++++|+
T Consensus       365 ~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~-~~l~~al~rl~  433 (496)
T PLN02376        365 LFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDD-DTLHVALGRIQ  433 (496)
T ss_pred             EEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCH-HHHHHHHHHHH
Confidence            99999997432       2357788777 569999999875  346899999996443 78999998863

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=100.00  E-value=6.8e-45  Score=349.17  Aligned_cols=311  Identities=22%  Similarity=0.297  Sum_probs=256.8

Q ss_pred             hHHHHHHhCCCCCCeEEcCCCCCCCCCCHH-HHHHHhcCCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           83 FEVLSIQLGRKPEDIVKIDANENPYGPPPE-VREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~-v~~al~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      ....+..+|....++|+|+.|+||+++++. +.+  ...   ..||++. .+||++++++++.  ++|++|+|+++++.+
T Consensus         8 ~~~~~~~~~~~~~~~i~l~~ne~p~~~~~~~~~~--~~~---~~yp~~~-~~Lr~~ia~~~~~--~~I~it~Gs~~al~~   79 (330)
T PRK05664          8 LRRAAQRYGIPLADWLDLSTGIAPWPWPVPAIPA--DAW---ARLPETD-DGLEAAARAYYGA--PQLLPVAGSQAAIQA   79 (330)
T ss_pred             HHHHHHHcCCCHHHheeecCCcCCCCCCCcccCH--HHH---HhCCCCh-HHHHHHHHHHhCC--CCEEECcCHHHHHHH
Confidence            344455566555678999999999977632 211  111   4488754 8999999999995  699999999999998


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~  241 (422)
                      ++.  +.+||+|++++|+|+.|...++..|++++.++.        +++++.+.  ++++++++|||||||.+++.+++.
T Consensus        80 ~~~--~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~--------~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~  147 (330)
T PRK05664         80 LPR--LRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDE--------AEVEAALD--SLDVLVVVNPNNPTGRRFDPARLL  147 (330)
T ss_pred             HHH--ccCCCEEEEcCCChHHHHHHHHHcCCeEEEech--------hhHhhhhc--CCCEEEEeCCcCCCCCccCHHHHH
Confidence            864  579999999999999999999999999999974        24555553  678999999999999999999999


Q ss_pred             HHHcC----CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHH
Q 014594          242 KILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVA  317 (422)
Q Consensus       242 ~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~  317 (422)
                      +|++.    +++||+||+|.++....+.. .....+++++++||||.||++|+|+||+++++++++.+.....+++.+.+
T Consensus       148 ~l~~~~~~~~~~iI~DE~y~~~~~~~s~~-~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~~~~~~~~~~~~  226 (330)
T PRK05664        148 AWHARLAARGGWLVVDEAFMDNTPQHSLA-ACAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLGPWTVSGP  226 (330)
T ss_pred             HHHHHHHhcCCEEEEECCcccCCCccccc-ccccCCCEEEEeeccccccCCCcceEEEEeCHHHHHHHHHhcCCCCCCHH
Confidence            98753    89999999999886433332 33346789999999999999999999999999999999988888899999


Q ss_pred             HHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCC
Q 014594          318 AEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE  396 (422)
Q Consensus       318 ~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~  396 (422)
                      .|.++.++|++..+.+ .++.++++++++.+.|++++. .+.++.++|+|++++   ++.++.+.|.++||.|+.+.   
T Consensus       227 ~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~~~~~~f~~~~~~---~~~~~~~~l~~~gi~v~~f~---  299 (330)
T PRK05664        227 TRWLAQAALADTPWQRRQRERLLAASQRLAALLRRHGL-TPAGGCALFQWVRTE---DAAALHEFLARRGILTRLFE---  299 (330)
T ss_pred             HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHCCC-cccCCcceEEEEecC---CHHHHHHHHHHCCeEEEECC---
Confidence            9999999999887777 889999999999999999863 333334488998875   67899999999999999753   


Q ss_pred             CCCeEEEEec-ChhhHHHHHHHHhhh
Q 014594          397 LKGYVRVSVG-KPEHTDALMECLMHL  421 (422)
Q Consensus       397 ~~~~iRis~~-~~~~~~~l~~al~~l  421 (422)
                      ..+++||+++ +.+++++|.++++++
T Consensus       300 ~~~~iRis~~~~~~~~~~l~~al~~~  325 (330)
T PRK05664        300 QPASLRFGLPADEADWARLDQALLAY  325 (330)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHHHH
Confidence            3579999999 677789999999876

>PRK06108 aspartate aminotransferase; Provisional

Probab=100.00  E-value=8.2e-45  Score=356.38  Aligned_cols=324  Identities=23%  Similarity=0.351  Sum_probs=272.8

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCC-cchHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPD-PESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRC  165 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~y~~-~~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al~~~~~~  165 (422)
                      .++++|+.|++++++++.+.+++.+. . ....|++ .|..+||+++++++    |  +++++|++|+|+++++..++..
T Consensus        24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~  103 (382)
T PRK06108         24 EGVLPLWFGESDLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQA  103 (382)
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHH
Confidence            46799999999999999999998763 2 2245865 48899999999985    6  7889999999999999999999


Q ss_pred             hcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC---CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594          166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (422)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~  242 (422)
                      ++++||.|+++.|+|..+...++..|++++.++.+   .+|.+|++++++.++ .+++++++++||||||.+++.+++++
T Consensus       104 l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~-~~~~~i~l~~p~NPtG~~~~~~~~~~  182 (382)
T PRK06108        104 LVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAIT-PRTRALFINSPNNPTGWTASRDDLRA  182 (382)
T ss_pred             hcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcC-ccceEEEEECCCCCCCcccCHHHHHH
Confidence            99999999999999999999999999999999964   346799999999986 68999999999999999999988888


Q ss_pred             HHcC----CCeEEEccCCccccCC-C-ch---hhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--C
Q 014594          243 ILEM----PILVVLDEAYTEFSGL-E-SR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--P  311 (422)
Q Consensus       243 i~~~----~~~li~Deay~~~~~~-~-~~---~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~  311 (422)
                      |++.    ++++|+||+|.++.++ + ..   .......+++++++||||.||++|+|+||+++++++++.+.+...  .
T Consensus       183 l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~~~~~~  262 (382)
T PRK06108        183 ILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQVLEKLIEYNT  262 (382)
T ss_pred             HHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHHHHHHHHHhcc
Confidence            8764    9999999999998764 2 11   222223578999999999999999999999999999998876643  3


Q ss_pred             CCCcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCCCCCHHHHHHHHH-hCCc
Q 014594          312 YNVSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLA-KMGV  387 (422)
Q Consensus       312 ~~~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI  387 (422)
                      ++++.+.|.++..+|++. ++++ .+++++++++.+.+.|++++.+.+ .|.+++|+|+++++..+..++++.|+ ++||
T Consensus       263 ~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~ll~~~gV  342 (382)
T PRK06108        263 SCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIPGVTDSLALAKRLVDEAGL  342 (382)
T ss_pred             cCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCCCCCHHHHHHHHHHhCCE
Confidence            567889999999999874 6777 888999999999999988754543 46678899999986667889999886 7899


Q ss_pred             EEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          388 MIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       388 ~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .++++..+  ..++++||+++.  +.+++.+++++|
T Consensus       343 ~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l  376 (382)
T PRK06108        343 GLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERL  376 (382)
T ss_pred             EEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHH
Confidence            99998753  346899999998  357888888876

>PRK05957 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.3e-44  Score=355.24  Aligned_cols=325  Identities=23%  Similarity=0.328  Sum_probs=268.9

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCC-cchHHHHHHHHHHc----CC--C-CCCEEEeCCHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPD-PESRRLRAALAKDS----GL--E-SDHILVGCGADELIDLIM  163 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y~~-~~~~~lr~~la~~~----~~--~-~~~i~~~~G~~~al~~~~  163 (422)
                      .++++|+.|++++++++.+.+++.+. .  ....|+. .|..++|+++++++    |+  + +++|++|+|+++++..++
T Consensus        27 ~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~  106 (389)
T PRK05957         27 PGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAI  106 (389)
T ss_pred             CCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHH
Confidence            35799999999999999999998762 2  2245744 47788888887765    65  3 678999999999999999


Q ss_pred             HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (422)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i  243 (422)
                      ..++++||+|+++.|+|..+...++..|++++.++.++++++|++++++.++ +++|+|+++|||||||.+++.+++++|
T Consensus       107 ~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~klv~~~~p~NPtG~~~~~~~~~~i  185 (389)
T PRK05957        107 LAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAIT-PKTRAIVTISPNNPTGVVYPEALLRAV  185 (389)
T ss_pred             HHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcC-cCceEEEEeCCCCCCCcCcCHHHHHHH
Confidence            9999999999999999998888888899999999987788999999999997 689999999999999999997777776


Q ss_pred             HcC----CCeEEEccCCccccCCCc----hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--CC
Q 014594          244 LEM----PILVVLDEAYTEFSGLES----RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN  313 (422)
Q Consensus       244 ~~~----~~~li~Deay~~~~~~~~----~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~~  313 (422)
                      ++.    |+++|+||+|.+|.++..    .....+..+++++++||||.||++|+|+||+++++++++++......  .+
T Consensus       186 ~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~  265 (389)
T PRK05957        186 NQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLEAIKKIQDTILIC  265 (389)
T ss_pred             HHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHHHHHHHHHHHhhcccC
Confidence            553    999999999999886531    11222445689999999999999999999999999999999877654  45


Q ss_pred             CcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCC-cc-cCCCceEEEEEeCCCCCHHHHHHHHH-hCCcE
Q 014594          314 VSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFL-NP-YPSYSNFILCEVTSGMDAKKLKDDLA-KMGVM  388 (422)
Q Consensus       314 ~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~-~~-~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~  388 (422)
                      .+.+.|.++..+|+++ +|++ .++.++++++.+.+.|++++.. .+ .|.+++|+|++++.+.++.++++.|. ++||.
T Consensus       266 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~gv~  345 (389)
T PRK05957        266 PPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNTDLNDFELVKQLIREYRVA  345 (389)
T ss_pred             CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCCCCChHHHHHHHHHHCCEE
Confidence            6778999999999874 6777 7788999999999999987543 43 35667899999987788999999987 68999


Q ss_pred             EEeCCCCCC--CCeEEEEecChhhHHHHHHHHhhh
Q 014594          389 IRHYNNKEL--KGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       389 v~~~~~~~~--~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ++++..++.  ++++||+++..+ .+++.+++++|
T Consensus       346 v~pg~~f~~~~~~~iRis~~~~~-~~~l~~~~~~l  379 (389)
T PRK05957        346 VIPGTTFGMKNGCYLRIAYGALQ-KATAKEGIERL  379 (389)
T ss_pred             EccchhhCCCCCCEEEEEEecCC-HHHHHHHHHHH
Confidence            999876432  569999998643 36677777765

>PRK07550 hypothetical protein; Provisional

Probab=100.00  E-value=1.3e-44  Score=355.05  Aligned_cols=332  Identities=19%  Similarity=0.280  Sum_probs=274.5

Q ss_pred             HHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCC-CCcchHHHHHHHHHHcC------CCCCCEEEeCCHHH
Q 014594           88 IQLGRKPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADE  157 (422)
Q Consensus        88 ~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y-~~~~~~~lr~~la~~~~------~~~~~i~~~~G~~~  157 (422)
                      .++..++.+.++|+.+++++.+++.+.+++.+. .  ....| +..|.++||++++++++      +++++|++|+|+++
T Consensus        22 ~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~  101 (386)
T PRK07550         22 AGYDGADGPLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQ  101 (386)
T ss_pred             HHHhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHH
Confidence            334345667899999999998888888888752 1  23568 45689999999999873      57899999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594          158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (422)
Q Consensus       158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (422)
                      ++..++.+++++||+|+++.|+|..+...++..|++++.++.+  .++.+|++.+++.++ .+++++++++||||||.++
T Consensus       102 al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~-~~~~~v~~~~P~NPtG~~~  180 (386)
T PRK07550        102 AFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALIT-PRTRAIALVTPNNPTGVVY  180 (386)
T ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhc-ccCcEEEEeCCCCCCCccc
Confidence            9999999999999999999999999998889999999999974  456789999999997 5899999999999999999


Q ss_pred             CHHHHHHHHcC----CCeEEEccCCccccCCCc-hhhhh---hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHH
Q 014594          236 NDEDLLKILEM----PILVVLDEAYTEFSGLES-RMEWV---KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR  307 (422)
Q Consensus       236 ~~e~l~~i~~~----~~~li~Deay~~~~~~~~-~~~~~---~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~  307 (422)
                      +.+++++|++.    ++++|+||+|.+|.++.. .....   +..+++++++||||.||++|+|+||+++++++++.+.+
T Consensus       181 ~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~  260 (386)
T PRK07550        181 PPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPARIAEIEK  260 (386)
T ss_pred             CHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHHHHHHHHH
Confidence            98877777663    999999999998865321 11111   22467999999999999999999999999999998887


Q ss_pred             hcCC--CCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC-CCCHHHHHHHH
Q 014594          308 AKQP--YNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDL  382 (422)
Q Consensus       308 ~~~~--~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~-~~~~~~~~~~L  382 (422)
                      ....  .+++.+.|.++..++++ .+|.+ .++.++++++.+.+.|++++.+.+.+.+++|+|++++. +.++.++++.|
T Consensus       261 ~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l  340 (386)
T PRK07550        261 FMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWELLASGAYFAYVRHPFPDRPSREVARRL  340 (386)
T ss_pred             HHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCceeCCCceEEEEecCCCCCCCHHHHHHHH
Confidence            7654  45688999999999987 56777 88899999999999998874445567788999999986 67899999987


Q ss_pred             H-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          383 A-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       383 ~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      . ++||.+.++..+.  .++++||+++... .+++.+++++|
T Consensus       341 ~~~~gv~v~pg~~f~~~~~~~iRis~~~~~-~~~~~~~~~~l  381 (386)
T PRK07550        341 AKEAGILCLPGTMFGPGQEGYLRLAFANAD-VAGIGELVERL  381 (386)
T ss_pred             HHhcCEEEeCchhhCCCCCCEEEEEeecCC-HHHHHHHHHHH
Confidence            6 7899999987642  3679999998644 36777777765

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=100.00  E-value=7.8e-45  Score=359.04  Aligned_cols=317  Identities=22%  Similarity=0.343  Sum_probs=255.3

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhc-CC------CCCCC-CCcchHHHHHHHHHHc------CCCCCCEEEeCCHHHHH
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQ-LK------FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELI  159 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~------~~~~y-~~~~~~~lr~~la~~~------~~~~~~i~~~~G~~~al  159 (422)
                      +.++++|+.|++++++++.+.+++.+ +.      ....| |..|..+||+++++++      ++++++|++|+|+++++
T Consensus        33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al  112 (409)
T PRK07590         33 EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDT  112 (409)
T ss_pred             CCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHH
Confidence            45689999999999999988887765 21      22567 6678999999999986      67899999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCE-----------EEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeC
Q 014594          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA-----------VVKVPRKS--DFSLNVELIADAVEREKPKCIFLTS  226 (422)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~-----------~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~  226 (422)
                      .+++. ++++||+|++++|+|..|...++..|++           ++.++.+.  ++.+|++       ++++|+|++||
T Consensus       113 ~~l~~-~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~-------~~~~k~i~l~n  184 (409)
T PRK07590        113 GNILD-IFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP-------EEKVDIIYLCF  184 (409)
T ss_pred             HHHHH-hcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCc-------ccCceEEEEeC
Confidence            98765 6789999999999999999999999987           88888643  3444422       25899999999


Q ss_pred             CCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhc-CCcEEEEccChhhhccccccceeeecC
Q 014594          227 PNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (422)
Q Consensus       227 p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~  298 (422)
                      ||||||.+++.+++++|++.    +++||+||+|.+|.+++.   .+..++. .+++|+++||||.||++|+|+||++++
T Consensus       185 P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~  264 (409)
T PRK07590        185 PNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVP  264 (409)
T ss_pred             CCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcC
Confidence            99999999999999998764    999999999999876442   1222222 357899999999999999999999999


Q ss_pred             HHHHHHH------------HH-hcCC-CCCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCC
Q 014594          299 LSIIEYL------------WR-AKQP-YNVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNP-YPS  360 (422)
Q Consensus       299 ~~~~~~l------------~~-~~~~-~~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~  360 (422)
                      +++++.+            .. .... .+++.+.|.++..+|.+.  .|++ .++.++++++.+.+.|++++ +.+ .|.
T Consensus       265 ~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~~~  343 (409)
T PRK07590        265 KELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESAG-FEVYGGV  343 (409)
T ss_pred             HHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcC-CceecCC
Confidence            9998721            11 1223 357889999999999753  5677 88899999999999999986 444 456


Q ss_pred             CceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          361 YSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       361 ~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +++|+|++++++.++.++.+.|. ++||.+.++..++  ..+++||++..+  .+++.+++++|
T Consensus       344 g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~--~~~l~~~l~rl  405 (409)
T PRK07590        344 NAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFGS--RENVLEAMERI  405 (409)
T ss_pred             cceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccCC--HHHHHHHHHHH
Confidence            89999999987777888988877 6799999987643  357999997544  36788888876

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=100.00  E-value=3.1e-44  Score=344.72  Aligned_cols=322  Identities=32%  Similarity=0.465  Sum_probs=275.0

Q ss_pred             CCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHH
Q 014594           80 ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELI  159 (422)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al  159 (422)
                      +.+++.+++++|.+..++++|+.|+|+++++  ..+..  .....+||++...++|+++++++++++++|++|+|+++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i   77 (330)
T TIGR01140         2 GGNLRRAAARYGIPPEDWLDFSTGINPLGPP--VPPIP--ASAWARYPDPEYDELRAAAAAYYGLPAASVLPVNGAQEAI   77 (330)
T ss_pred             CccHHHHHHHcCCChhheeEccccCCCCCCC--hhhcc--hHHHhhCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHH
Confidence            4568889999998888999999999999875  22211  1222668877679999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (422)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~  239 (422)
                      ..+.+. +.+| .|+++.|+|..+...++..|.+++.++       |++.+++.+.  +++++++++||||||.+++.++
T Consensus        78 ~~~~~~-l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~-------d~~~l~~~~~--~~~~v~i~~p~NPtG~~~~~~~  146 (330)
T TIGR01140        78 YLLPRL-LAPG-RVLVLAPTYSEYARAWRAAGHEVVELP-------DLDRLPAALE--ELDVLVLCNPNNPTGRLIPPET  146 (330)
T ss_pred             HHHHHH-hCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC-------CHHHHHhhcc--cCCEEEEeCCCCCCCCCCCHHH
Confidence            998775 5777 699999999999999999999999987       7899999884  5789999999999999999999


Q ss_pred             HHHHHcC----CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCc
Q 014594          240 LLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVS  315 (422)
Q Consensus       240 l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~  315 (422)
                      +++|++.    |+++|+||+|.+|....+.....+..+++++++||||.||++|+|+||+++++++++.+......++.+
T Consensus       147 ~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~s  226 (330)
T TIGR01140       147 LLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLREALGPWTVN  226 (330)
T ss_pred             HHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHHHHHHhcCCCCCch
Confidence            9888764    999999999998876433333233468899999999999999999999999999999999888888999


Q ss_pred             HHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC
Q 014594          316 VAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN  394 (422)
Q Consensus       316 ~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~  394 (422)
                      .++|.++..++++.+|.+ .+++++++++.+.+.|++++.+.+.|+.++|+|++++   +..++.+.|+++||.+.++..
T Consensus       227 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~f~~~~~~---~~~~l~~~l~~~gi~v~pg~~  303 (330)
T TIGR01140       227 GPARAAGRAALADTAWQAATRARLAAERARLAALLARLGGLEVVGGTALFLLVRTP---DAAALHEALARRGILIRDFDN  303 (330)
T ss_pred             HHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCeEEEEEcC---CHHHHHHHHHHCCEEEEECCC
Confidence            999999999999888887 8899999999999999999866667788999999986   467899999999999999887


Q ss_pred             CC--CCCeEEEEecChhhHHHHHHHHh
Q 014594          395 KE--LKGYVRVSVGKPEHTDALMECLM  419 (422)
Q Consensus       395 ~~--~~~~iRis~~~~~~~~~l~~al~  419 (422)
                      +.  ..+++||++++..+.+.|..+++
T Consensus       304 f~~~~~~~iRi~~~~~~~~~~~~~~l~  330 (330)
T TIGR01140       304 FPGLDPRYLRFALPTDEENDRLEEALA  330 (330)
T ss_pred             CCCCCCCEEEEEecCHHHHHHHHHhhC
Confidence            43  35799999998766677776653

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=100.00  E-value=1.9e-44  Score=351.26  Aligned_cols=324  Identities=23%  Similarity=0.327  Sum_probs=262.9

Q ss_pred             HHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCc-chHHHHHHHHHHc----C---CCCCCEEEeCCH
Q 014594           84 EVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDS----G---LESDHILVGCGA  155 (422)
Q Consensus        84 ~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~-~~~~lr~~la~~~----~---~~~~~i~~~~G~  155 (422)
                      ..++......+.++++|+.|++..+.++.+.+++.+.....+|+++ |..+||+++++++    |   +++++|++|+|+
T Consensus        16 ~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~   95 (364)
T PRK07865         16 APAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADAPGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGS   95 (364)
T ss_pred             HHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhhCCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccCh
Confidence            3344333344567899999987777678888888764333578765 7899999999997    3   668999999999


Q ss_pred             HHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594          156 DELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (422)
Q Consensus       156 ~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~  234 (422)
                      ++++..++..+ +++||.|+++.|+|+.|...++..|++++.++.       +++++    +.++++|+++|||||||.+
T Consensus        96 ~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-------~~~l~----~~~~~~v~~~~p~NPtG~~  164 (364)
T PRK07865         96 KELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADS-------LTELG----PQRPALIWLNSPSNPTGRV  164 (364)
T ss_pred             HHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCC-------hhhCC----cccceEEEEcCCCCCCCcc
Confidence            99999998887 799999999999999999999999999998752       23322    2578999999999999999


Q ss_pred             CCHHHHHHHHcC----CCeEEEccCCccccCCCchhhhhh------cCCcEEEEccChhhhccccccceeeecCHHHHHH
Q 014594          235 INDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVK------KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY  304 (422)
Q Consensus       235 ~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~------~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~  304 (422)
                      ++.+++++|++.    ++++|+||+|.++.+++.......      ..+++++++||||.|+++|+|+||+++++++++.
T Consensus       165 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~~  244 (364)
T PRK07865        165 LGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAE  244 (364)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCHHHHHH
Confidence            999999888753    999999999999876542222111      3468999999999999999999999999999999


Q ss_pred             HHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHH
Q 014594          305 LWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDD  381 (422)
Q Consensus       305 l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~  381 (422)
                      +.....  .++++.+.|.++..+|++.++.+ .++.++++++.+.+.|++.++....|++++|+|++++  .+..++.+.
T Consensus       245 ~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~  322 (364)
T PRK07865        245 LLEVRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAAGFRVDHSEAGLYLWATRG--EDCWDTVAW  322 (364)
T ss_pred             HHHHHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCccEEEEEeCC--CCHHHHHHH
Confidence            886653  46789999999999999877877 8889999999999999988643334667789999884  456788888


Q ss_pred             HHhCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          382 LAKMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       382 L~~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      |.++||.+.++..++  .++++||+++..  .+++++++++|+
T Consensus       323 l~~~gv~v~pg~~f~~~~~~~iRi~~~~~--~~~~~~~~~~l~  363 (364)
T PRK07865        323 LAERGILVAPGDFYGPAGAQHVRVALTAT--DERIAAAVERLA  363 (364)
T ss_pred             HHHCCEEEeCccccCcCCCCEEEEEecCC--HHHHHHHHHHhh
Confidence            999999999977533  468999999864  377999988874

>PRK08912 hypothetical protein; Provisional

Probab=100.00  E-value=2.5e-44  Score=353.28  Aligned_cols=324  Identities=21%  Similarity=0.300  Sum_probs=268.6

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhc-C-CCCCCCCCc-chHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQ-L-KFPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR  164 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~-~~~~~y~~~-~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~~~~~  164 (422)
                      .++++|+.|.++.+.++.+.+++.+ . .....|+++ |..+||+++++++    |  ++++ +|++|+|+++++..++.
T Consensus        26 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~  105 (387)
T PRK08912         26 HGAINLGQGFPDDPGPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALL  105 (387)
T ss_pred             CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHH
Confidence            4679999999988878888877665 2 223668765 7899999999986    3  5677 99999999999999999


Q ss_pred             HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (422)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i  243 (422)
                      .++++||+|+++.|+|..+...++..|++++.++.+ +++.+|++.+++.+. .++|+++++|||||||.+++.+++++|
T Consensus       106 ~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~s~~~~~~i  184 (387)
T PRK08912        106 ALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFS-PRTKAVLLNNPLNPAGKVFPREELALL  184 (387)
T ss_pred             HhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhC-ccceEEEEeCCCCCcCcccCHHHHHHH
Confidence            999999999999999999999999999999999974 468899999999986 689999999999999999999998887


Q ss_pred             HcC----CCeEEEccCCccccCCCc---hhhhh-hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--CC
Q 014594          244 LEM----PILVVLDEAYTEFSGLES---RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN  313 (422)
Q Consensus       244 ~~~----~~~li~Deay~~~~~~~~---~~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~~  313 (422)
                      ++.    ++++|+||+|.++.+++.   ..... ...+++++++||||.||++|+|+||+++++++++.+......  ++
T Consensus       185 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~l~~~~~~~~~~  264 (387)
T PRK08912        185 AEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPPLLRVLAKAHQFLTFT  264 (387)
T ss_pred             HHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhcccc
Confidence            653    999999999998876431   12222 225789999999999999999999999999999998776654  66


Q ss_pred             CcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC---CCCHHHHHHHHH-hCCc
Q 014594          314 VSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS---GMDAKKLKDDLA-KMGV  387 (422)
Q Consensus       314 ~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~---~~~~~~~~~~L~-~~gI  387 (422)
                      .++..|.++..+|.. .+|.+ .++.++++++.+.+.|++++.....+.+++|+|+++++   ..++.++++.|+ ++||
T Consensus       265 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV  344 (387)
T PRK08912        265 TPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRIGFPVLPSQGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGV  344 (387)
T ss_pred             CChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEecccccCCCCCHHHHHHHHHhcCCE
Confidence            777788888887754 57777 89999999999999999986433345567889999974   357888999886 6899


Q ss_pred             EEEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          388 MIRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       388 ~v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .+.++..+    ...+++||+++.+  .+.+.+++++|
T Consensus       345 ~v~pg~~f~~~~~~~~~iRl~~~~~--~~~l~~~l~rl  380 (387)
T PRK08912        345 AAIPVSAFYEEDPVTSVVRFCFAKR--DATLDEAVERL  380 (387)
T ss_pred             EEecchhhCCCCCCCCEEEEEEeCC--HHHHHHHHHHH
Confidence            99998753    2358999999975  37788888876

>PRK08361 aspartate aminotransferase; Provisional

Probab=100.00  E-value=4.3e-44  Score=351.95  Aligned_cols=324  Identities=23%  Similarity=0.418  Sum_probs=270.2

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-C-CCCCC-CCcchHHHHHHHHHHc------CCCCCCEEEeCCHHHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELIDLIMRC  165 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~y-~~~~~~~lr~~la~~~------~~~~~~i~~~~G~~~al~~~~~~  165 (422)
                      .++|+|+.|++++++++.+.+++.+. . ....| |..|..+||+++++++      ++++++|++|+|+++++.+++.+
T Consensus        33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~  112 (391)
T PRK08361         33 ENVISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFES  112 (391)
T ss_pred             cCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHH
Confidence            46899999999998888888888763 2 22456 6678999999999987      36789999999999999999999


Q ss_pred             hcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594          166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (422)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i  243 (422)
                      ++++||.|++++|+|..+...+...|++++.++.+.  ++.+|++.+++.++ .++++++++|||||||.+++.+++.+|
T Consensus       113 l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~-~~~~~v~i~~p~NPtG~~~~~~~~~~l  191 (391)
T PRK08361        113 LLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELIT-KRTRMIVINYPNNPTGATLDKEVAKAI  191 (391)
T ss_pred             hcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc-cccEEEEEeCCCCCCCcCcCHHHHHHH
Confidence            999999999999999999999999999999998643  56899999999997 689999999999999999997777777


Q ss_pred             Hc---C-CCeEEEccCCccccCCCc-hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCCc
Q 014594          244 LE---M-PILVVLDEAYTEFSGLES-RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVS  315 (422)
Q Consensus       244 ~~---~-~~~li~Deay~~~~~~~~-~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~~  315 (422)
                      ++   . ++++|+||+|.+|.+++. ...... ..+++++++||||.||++|+|+||+++++++++.+.....  .++++
T Consensus       192 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~  271 (391)
T PRK08361        192 ADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDMIKLHAYIIGNVA  271 (391)
T ss_pred             HHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCHHHHHHHHHHHhhhccCCC
Confidence            55   3 999999999999875322 112111 3468999999999999999999999999999998876654  36788


Q ss_pred             HHHHHHHHHHccCCh---HHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC-CCCHHHHHHHHH-hCCcE
Q 014594          316 VAAEVAACAALQNPI---YLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKLKDDLA-KMGVM  388 (422)
Q Consensus       316 ~~~~~aa~~~L~~~~---~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~-~~~~~~~~~~L~-~~gI~  388 (422)
                      .+.|.++..+|+++.   +++ .++.++++++.+.+.|++++++.+ .|.+++|+|+++++ +.++.++.+.|+ ++||.
T Consensus       272 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~  351 (391)
T PRK08361        272 SFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFANIDETGMSSEDFAEWLLEKARVV  351 (391)
T ss_pred             hHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEEECCCCCCCHHHHHHHHHHhCCEE
Confidence            999999999998753   466 888999999999999998855554 45667889999984 568899998887 68999


Q ss_pred             EEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          389 IRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       389 v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +.++..++  ..+++||+++.++  +++.+++++|
T Consensus       352 v~pg~~f~~~~~~~iRi~~~~~~--~~l~~al~~l  384 (391)
T PRK08361        352 VIPGTAFGKAGEGYIRISYATSK--EKLIEAMERM  384 (391)
T ss_pred             EcCchhhCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence            99987643  3589999999754  5788888876

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=100.00  E-value=2.8e-44  Score=329.36  Aligned_cols=330  Identities=25%  Similarity=0.364  Sum_probs=276.1

Q ss_pred             HhCCCC--CCeEEcCCCCCCCCCCHHHHHHHhc-CCCC-CCCCCcchHHHHHHHHHHc------CCCCCCEEEeCCHHHH
Q 014594           89 QLGRKP--EDIVKIDANENPYGPPPEVREALGQ-LKFP-YIYPDPESRRLRAALAKDS------GLESDHILVGCGADEL  158 (422)
Q Consensus        89 ~~~~~~--~~~i~l~~~~~~~~~~~~v~~al~~-~~~~-~~y~~~~~~~lr~~la~~~------~~~~~~i~~~~G~~~a  158 (422)
                      +|...+  .|++.|...+++|+.+|+|.+|+.+ .+++ .+|| .+..++-+++++|+      .++++.|++++|...+
T Consensus        17 KWd~~~g~~DvlPmWVADMDf~~pp~i~~Al~~rvdhGvfGY~-~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpg   95 (388)
T COG1168          17 KWDAHPGNEDVLPMWVADMDFPTPPEIIEALRERVDHGVFGYP-YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPG   95 (388)
T ss_pred             eccccCCCCCcceeeeecccCCCCHHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHh
Confidence            344444  7899999999999999999999997 5665 7787 44566777777764      5688899999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC---CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (422)
Q Consensus       159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (422)
                      +..+++.+.++||.|++..|.|+++....+..|.+++..|+   +..+.+|+++||+++.++++|++++||||||||.++
T Consensus        96 i~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvw  175 (388)
T COG1168          96 ISLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVW  175 (388)
T ss_pred             HHHHHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccc
Confidence            99999999999999999999999999999999999999994   345678999999999878889999999999999999


Q ss_pred             CHHHHHHHHcC----CCeEEEccCCccccCCC-chhhh--hh--cCCcEEEEccChhhhccccccceeeec-CHHHHHHH
Q 014594          236 NDEDLLKILEM----PILVVLDEAYTEFSGLE-SRMEW--VK--KHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYL  305 (422)
Q Consensus       236 ~~e~l~~i~~~----~~~li~Deay~~~~~~~-~~~~~--~~--~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~~~l  305 (422)
                      +.|+|.+|++.    |+.||+||+|+++...+ .+...  +.  -.++.+++.|.||+|+++|+.+++++. ++++..++
T Consensus       176 t~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~  255 (388)
T COG1168         176 TKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKF  255 (388)
T ss_pred             cHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHH
Confidence            99999998775    99999999999998655 33222  22  247899999999999999999999887 45554444


Q ss_pred             HHh-c--CCCCCcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHcc-CCCCccc-CCCceEEEEEeCC-CCCHHH
Q 014594          306 WRA-K--QPYNVSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKD-VPFLNPY-PSYSNFILCEVTS-GMDAKK  377 (422)
Q Consensus       306 ~~~-~--~~~~~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~-~~~~~~~-p~~~~f~~~~~~~-~~~~~~  377 (422)
                      .+. .  ...++|.++..|..++++++ .|++ .++.++.+++++.+.|++ +|++.+. |++++.+|+++.+ +.+..+
T Consensus       256 ~~~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l~l~d~~  335 (388)
T COG1168         256 LKRLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCRELGLDDSE  335 (388)
T ss_pred             HHHHHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeeccccCCChHH
Confidence            433 2  23678999999999999985 7999 999999999999999987 6778765 4455557999875 677789


Q ss_pred             HHHHHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          378 LKDDLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       378 ~~~~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +.+.|+ +.+|.+.+|..+  ++.+++|++++++.  ..|++|+++|
T Consensus       336 l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr--~~L~eal~ri  380 (388)
T COG1168         336 LAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPR--AILEEALERL  380 (388)
T ss_pred             HHHHHHHhhcEeccCCCccCcCCCceEEEecCCCH--HHHHHHHHHH
Confidence            999988 789999998884  45689999999987  4488888876

>PRK09082 methionine aminotransferase; Validated

Probab=100.00  E-value=5e-44  Score=350.76  Aligned_cols=325  Identities=22%  Similarity=0.339  Sum_probs=271.2

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCC-cchHHHHHHHHHHc----CC--CCC-CEEEeCCHHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPD-PESRRLRAALAKDS----GL--ESD-HILVGCGADELIDLIMR  164 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~y~~-~~~~~lr~~la~~~----~~--~~~-~i~~~~G~~~al~~~~~  164 (422)
                      .++|+|+.|++++++++.+.+++.+. . ....|+. .|..++|+++++++    ++  +++ +|++|+|+++++..++.
T Consensus        30 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~  109 (386)
T PRK09082         30 HGAINLSQGFPDFDGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAIL  109 (386)
T ss_pred             CCEEEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHH
Confidence            45799999999998889888888763 2 2356854 47899999999864    54  344 89999999999999999


Q ss_pred             HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (422)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i  243 (422)
                      .++++||+|+++.|+|..+...++..|++++.++.+ +++.+|++++++.++ .+++++++++||||||.+++.+++++|
T Consensus       110 ~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~~~~~i  188 (386)
T PRK09082        110 ALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAIS-PRTRLIILNTPHNPSGTVWSAADMRAL  188 (386)
T ss_pred             HHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcC-ccceEEEEeCCCCCCCcCCCHHHHHHH
Confidence            999999999999999999999999999999999974 468899999999997 689999999999999999999999888


Q ss_pred             HcC----CCeEEEccCCccccCCCc---hh-hhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCC
Q 014594          244 LEM----PILVVLDEAYTEFSGLES---RM-EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN  313 (422)
Q Consensus       244 ~~~----~~~li~Deay~~~~~~~~---~~-~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~  313 (422)
                      ++.    ++++|+||+|.++.+++.   .. ......+++++++||||.||++|+|+||+++++++++.+.+...  .++
T Consensus       189 ~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l~~~~~~~~~~~~~~  268 (386)
T PRK09082        189 WQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAALSAEFRKVHQYNTFT  268 (386)
T ss_pred             HHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHHHHHHHHHHhhhcCC
Confidence            764    999999999998875431   12 22223578999999999999999999999999999999887763  578


Q ss_pred             CcHHHHHHHHHHcc-CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC--CCCHHHHHHHHH-hCCcE
Q 014594          314 VSVAAEVAACAALQ-NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS--GMDAKKLKDDLA-KMGVM  388 (422)
Q Consensus       314 ~~~~~~~aa~~~L~-~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~--~~~~~~~~~~L~-~~gI~  388 (422)
                      ++.+.|.++..+++ ++++++ .++.++++++.+.+.|++.+.....+.+++|+|+++|+  +.+..++++.|. ++||.
T Consensus       269 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~  348 (386)
T PRK09082        269 VNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANSRFKLLPCEGTYFQLVDYSAISDLDDVEFCQWLTREHGVA  348 (386)
T ss_pred             CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEE
Confidence            89999999999997 567777 88899999999999999876333345677889999973  567889999875 88999


Q ss_pred             EEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          389 IRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       389 v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      +.++..+    ...+++||+++.+  .+.+.+++++|+
T Consensus       349 v~pg~~f~~~~~~~~~~Ri~~~~~--~~~l~~~~~rl~  384 (386)
T PRK09082        349 AIPLSVFYADPFPHRLVRLCFAKQ--EETLDAAAERLC  384 (386)
T ss_pred             EeCcHHhCCCCCCCCEEEEEecCC--HHHHHHHHHHHh
Confidence            9998753    2357999999974  377999998874

>PRK09265 aminotransferase AlaT; Validated

Probab=100.00  E-value=1.3e-43  Score=349.92  Aligned_cols=326  Identities=21%  Similarity=0.310  Sum_probs=257.6

Q ss_pred             CCCCeEEcCCCCC---CCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHc------CCCCCCEEEeCCHHHHHHH
Q 014594           93 KPEDIVKIDANEN---PYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGADELIDL  161 (422)
Q Consensus        93 ~~~~~i~l~~~~~---~~~~~~~v~~al~~-~~~~~~y~~~-~~~~lr~~la~~~------~~~~~~i~~~~G~~~al~~  161 (422)
                      .+.++++|+.|.+   ++++++.+.+++.+ ......|+++ |..+||+++++++      ++++++|++|+|+++++..
T Consensus        31 ~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~  110 (404)
T PRK09265         31 EGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPTAQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVM  110 (404)
T ss_pred             cCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHH
Confidence            4567899999765   46688888888765 3334678766 6899999999998      6889999999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~  239 (422)
                      ++++++++||+|+++.|+|..+...++..|++++.++.+  .++.+|++++++.+. .++++|+++|||||||.+++.++
T Consensus       111 ~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~P~NPtG~~~~~~~  189 (404)
T PRK09265        111 AMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKIT-PRTKAIVIINPNNPTGAVYSKEL  189 (404)
T ss_pred             HHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhcc-ccceEEEEECCCCCCCcCCCHHH
Confidence            999999999999999999999999998899999988753  357799999999986 68999999999999999999777


Q ss_pred             HHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeec--CHH----HHHHHH
Q 014594          240 LLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--PLS----IIEYLW  306 (422)
Q Consensus       240 l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~--~~~----~~~~l~  306 (422)
                      +++|++.    |+++|+||+|.++.+++.   .........++++++||||.||++|+|+||+++  +++    +++.+.
T Consensus       190 ~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~  269 (404)
T PRK09265        190 LEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLD  269 (404)
T ss_pred             HHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHH
Confidence            7777653    899999999999875432   222222334689999999999999999999996  443    444443


Q ss_pred             Hhc-CCCCCcHHHHHHHHHHccCChHHH----HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCC----CH-
Q 014594          307 RAK-QPYNVSVAAEVAACAALQNPIYLE----VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGM----DA-  375 (422)
Q Consensus       307 ~~~-~~~~~~~~~~~aa~~~L~~~~~~~----~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~----~~-  375 (422)
                      ... ..+++|.++|.++.++|.+.++..    ..+++.++++.+.+.|++++.+. ..|++|+|+|++++...    +. 
T Consensus       270 ~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~~~~~~~~~~~~~  349 (404)
T PRK09265        270 MLASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFPKLDPKVYPIHDDE  349 (404)
T ss_pred             HHhccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEEecccccCCCCHH
Confidence            332 246788999999999997654333    23567788999999998875454 45778999999997431    33 


Q ss_pred             HHHHHHHHhCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          376 KKLKDDLAKMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       376 ~~~~~~L~~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +.+.+.|.++||.+.++..++  .++++||+++.+  .+++.+++++|
T Consensus       350 ~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~--~e~l~~~l~rl  395 (404)
T PRK09265        350 QFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPR--VDDLEEAIGRI  395 (404)
T ss_pred             HHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCC--HHHHHHHHHHH
Confidence            456677779999999987743  468999999754  36677777776

>PRK06855 aminotransferase; Validated

Probab=100.00  E-value=8e-44  Score=353.43  Aligned_cols=329  Identities=19%  Similarity=0.238  Sum_probs=258.7

Q ss_pred             CCCCCeEEcCCCCC---CCCCCHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHHHc----C--CCCCCEEEeCCHHHH
Q 014594           92 RKPEDIVKIDANEN---PYGPPPEVREALGQL---KFPYIY-PDPESRRLRAALAKDS----G--LESDHILVGCGADEL  158 (422)
Q Consensus        92 ~~~~~~i~l~~~~~---~~~~~~~v~~al~~~---~~~~~y-~~~~~~~lr~~la~~~----~--~~~~~i~~~~G~~~a  158 (422)
                      ..+.++++++.|++   ++.+|+.+.+++.+.   .....| |..|..+||+++++++    |  +++++|++|+|++++
T Consensus        29 ~~g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~a  108 (433)
T PRK06855         29 KLGVKITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDA  108 (433)
T ss_pred             hccccccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHH
Confidence            34567899999988   678888888887763   122567 4568999999999997    3  678899999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCchhHHHHH-HHcCCEEEEecCC--CCCCCCHHHHHHHhhc-CCCeEEEEeCCCCccCcC
Q 014594          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDA-AVNGAAVVKVPRK--SDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSI  234 (422)
Q Consensus       159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~  234 (422)
                      +..++. ++++||.|+++.|+|+.|.... ...|++++.++.+  ++|.+|+++|++.+.+ ++++++++++||||||.+
T Consensus       109 l~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~  187 (433)
T PRK06855        109 IAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAV  187 (433)
T ss_pred             HHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcC
Confidence            999986 8899999999999999887543 3468899988854  4678999999999863 468999999999999999


Q ss_pred             CCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecC-----H---
Q 014594          235 INDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-----L---  299 (422)
Q Consensus       235 ~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-----~---  299 (422)
                      ++.+++++|++.    +++||+||+|.++.+++.   .+..+....++|+++||||.|++||+|+||++++     +   
T Consensus       188 ~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~  267 (433)
T PRK06855        188 YPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFK  267 (433)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHH
Confidence            999999998764    999999999999876432   2222222236799999999999999999999973     2   


Q ss_pred             HHHHHHHHhcC-CCCCcHHHHHHHHHHccCC---hHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCC
Q 014594          300 SIIEYLWRAKQ-PYNVSVAAEVAACAALQNP---IYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGM  373 (422)
Q Consensus       300 ~~~~~l~~~~~-~~~~~~~~~~aa~~~L~~~---~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~  373 (422)
                      .+++.+..... ..+++.+.|.++..+|+++   +|++ .++.++++++.+.+.|++++.+. ..|.+++|+|+++|++.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l~~~~  347 (433)
T PRK06855        268 KYINSILNAKMIEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVFEDGV  347 (433)
T ss_pred             HHHHHHHHhhccccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeecccccc
Confidence            23344433322 3467889999999999875   4676 88899999999999998874444 35678899999998542


Q ss_pred             ---------------------------CHHHHHHHH-HhCCcEEEeCCCCC-CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          374 ---------------------------DAKKLKDDL-AKMGVMIRHYNNKE-LKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       374 ---------------------------~~~~~~~~L-~~~gI~v~~~~~~~-~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                                                 +..+++..+ .++||.+.||..++ ...++||+++... .++|.+++++|+
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~-~~~i~~~~~~l~  424 (433)
T PRK06855        348 LNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERD-EEKFEWIYQTLA  424 (433)
T ss_pred             ccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCc-HHHHHHHHHHHH
Confidence                                       355666554 48899999998753 2357999999744 488999988763

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=2.3e-44  Score=356.78  Aligned_cols=327  Identities=21%  Similarity=0.270  Sum_probs=261.5

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhcC-C-------------CCCCCCCc-chHHHHHHHHHHcC--------CCCCCE
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQL-K-------------FPYIYPDP-ESRRLRAALAKDSG--------LESDHI  149 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-------------~~~~y~~~-~~~~lr~~la~~~~--------~~~~~i  149 (422)
                      .+..+|+|+..||.+. .+++.+.+.+. .             ....|.+. |..+||+++|++++        +++++|
T Consensus        45 np~g~i~l~~aeN~l~-~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~I  123 (447)
T PLN02607         45 NPSGVIQMGLAENQVS-FDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRI  123 (447)
T ss_pred             CCCceEEEechhhhhh-HHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHe
Confidence            4566899999999874 35555555431 1             11336554 78999999999873        688999


Q ss_pred             EEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH-HcCCEEEEecCC--CCCCCCHHHHHHHhhc-----CCCeE
Q 014594          150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKC  221 (422)
Q Consensus       150 ~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~--~~~~~d~~~l~~~i~~-----~~~~~  221 (422)
                      ++|+|+++++++++.++++|||.|+++.|+|+.+...+. ..|+++++++.+  ++|.+|++++++++++     .++|+
T Consensus       124 vit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~  203 (447)
T PLN02607        124 VLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRG  203 (447)
T ss_pred             EEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeE
Confidence            999999999999999999999999999999999987776 479999999864  4577999999998863     47899


Q ss_pred             EEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC----chhhhh------hcCCcEEEEccChhhhcc
Q 014594          222 IFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE----SRMEWV------KKHDNLIVLRTFSKRAGL  287 (422)
Q Consensus       222 i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~----~~~~~~------~~~~~~i~~~S~SK~~~~  287 (422)
                      |+++|||||||.+++.+++++|+++    ++++|+||+|.++.++.    +.....      +..+++++++||||.||+
T Consensus       204 lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~  283 (447)
T PLN02607        204 VLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGL  283 (447)
T ss_pred             EEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCC
Confidence            9999999999999999999998764    99999999999866542    112211      114689999999999999


Q ss_pred             ccccceeeec-CHHHHHHHHHhcCCCCCcHHHHHHHHHHccCChHH----H-HHHHHHHHHHHHHHHHccCCCCcccCCC
Q 014594          288 AGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYL----E-VKEALIKERERLFKLLKDVPFLNPYPSY  361 (422)
Q Consensus       288 ~G~r~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~----~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~  361 (422)
                      +|+|+||+++ ++++++.+........+|.+.|.++..+|++++|.    . .+++++++++.+.+.|++.+.....+.+
T Consensus       284 ~GlRvG~ivs~n~~l~~~~~~~~~~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~~~~~~a  363 (447)
T PLN02607        284 PGFRVGTIYSYNDKVVTTARRMSSFTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRAGIECLKGNA  363 (447)
T ss_pred             CcceEEEEEEcCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCe
Confidence            9999999998 67787777766555568899999999999997654    4 7788999999999999987643345678


Q ss_pred             ceEEEEEeCCCC------CHHHHHHHHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          362 SNFILCEVTSGM------DAKKLKDDLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       362 ~~f~~~~~~~~~------~~~~~~~~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      |+|+|+++++..      ...++.+.|+ ++||.+.||..+  ..++|+||+|+..++ +.|.+++++|
T Consensus       364 g~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~-~~l~~gl~Ri  431 (447)
T PLN02607        364 GLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSE-DTLEVALKRI  431 (447)
T ss_pred             eEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCH-HHHHHHHHHH
Confidence            899999997421      2346777776 579999998874  347999999997432 6788888886

>PRK07683 aminotransferase A; Validated

Probab=100.00  E-value=9.2e-44  Score=348.86  Aligned_cols=324  Identities=24%  Similarity=0.375  Sum_probs=268.2

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCC-CcchHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYP-DPESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR  164 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~y~-~~~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~~~~~  164 (422)
                      +++++|+.+.+.+++++.+.+++.+. . ....|+ ..|..+||+++++++    |  ++++ +|++|+|+++++.+++.
T Consensus        28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~  107 (387)
T PRK07683         28 DNLISLTIGQPDFPTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFR  107 (387)
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence            46799999998888888888888763 2 235674 568999999999997    4  4677 99999999999999999


Q ss_pred             HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (422)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i  243 (422)
                      .++++||+|+++.|+|..|...++..|++++.++.+ +++.+|++.+++.+. .+++++++++||||||.+++.+++++|
T Consensus       108 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~i~i~~p~NPtG~~~s~~~~~~l  186 (387)
T PRK07683        108 TILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAIT-EKTRCVVLPYPSNPTGVTLSKEELQDI  186 (387)
T ss_pred             HhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcC-cCceEEEEeCCCCCCCcCCCHHHHHHH
Confidence            999999999999999999999999999999999864 567789999999987 689999999999999999999988888


Q ss_pred             HcC----CCeEEEccCCccccCCCch---hhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCC
Q 014594          244 LEM----PILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNV  314 (422)
Q Consensus       244 ~~~----~~~li~Deay~~~~~~~~~---~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~  314 (422)
                      ++.    |+++|+||+|.++.+++..   ....+..+++++++||||.||++|+|+||+++++++++.+.....  ..++
T Consensus       187 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l~~~~~~~~~~~~~~~  266 (387)
T PRK07683        187 ADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKHILKVHQYNVTCA  266 (387)
T ss_pred             HHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHHHHHHHHHHHHhccCCC
Confidence            764    8999999999998754322   222224578999999999999999999999999999998876543  2446


Q ss_pred             cHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC-CCCHHHHHHHH-HhCCcEEE
Q 014594          315 SVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDL-AKMGVMIR  390 (422)
Q Consensus       315 ~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~-~~~~~~~~~~L-~~~gI~v~  390 (422)
                      +.+.|.++..+|.++ .+.+ .+++++++++.+.+.|++.+.....|++++|+|+.++. +.++.++...+ .++||.++
T Consensus       267 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~  346 (387)
T PRK07683        267 SSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISMGLDVEKPTGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVV  346 (387)
T ss_pred             ChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEc
Confidence            778999999999764 5666 88889999999999999876333456677889998874 55777887665 58899999


Q ss_pred             eCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          391 HYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       391 ~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ++..+  ..++++||+++.+  .+++.+++++|
T Consensus       347 pg~~f~~~~~~~~Ri~~~~~--~~~~~~al~~l  377 (387)
T PRK07683        347 PGSAFSEYGEGYVRLSYAYS--IETLKEGLDRL  377 (387)
T ss_pred             CchhhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            98763  2368999999974  46788888876

>PTZ00377 alanine aminotransferase; Provisional

Probab=100.00  E-value=3.9e-44  Score=360.31  Aligned_cols=327  Identities=18%  Similarity=0.248  Sum_probs=256.2

Q ss_pred             CCCCeEEcCCCCCC----------------CCC-------------CHHHHHHHhc----CC-CCCCCCCc-chHHHHHH
Q 014594           93 KPEDIVKIDANENP----------------YGP-------------PPEVREALGQ----LK-FPYIYPDP-ESRRLRAA  137 (422)
Q Consensus        93 ~~~~~i~l~~~~~~----------------~~~-------------~~~v~~al~~----~~-~~~~y~~~-~~~~lr~~  137 (422)
                      ++.++|+|+.|++.                +..             |..+++++.+    .. ....|+.. |..+||++
T Consensus        44 ~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~a  123 (481)
T PTZ00377         44 PFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKA  123 (481)
T ss_pred             CcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHH
Confidence            45799999999985                555             3366666543    11 22558554 89999999


Q ss_pred             HHHHcC------CCCCCEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHH
Q 014594          138 LAKDSG------LESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVE  208 (422)
Q Consensus       138 la~~~~------~~~~~i~~~~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~  208 (422)
                      ++++++      +++++|++|+|+++++..++++++ ++||.|+++.|+|+.|...++..|++++.++.+  ++|.+|++
T Consensus       124 ia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~  203 (481)
T PTZ00377        124 VAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQE  203 (481)
T ss_pred             HHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHH
Confidence            999973      678999999999999999999998 799999999999999999999999999999964  45889999


Q ss_pred             HHHHHhhc-----CCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC--ch---hhh---hhc
Q 014594          209 LIADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE--SR---MEW---VKK  271 (422)
Q Consensus       209 ~l~~~i~~-----~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~--~~---~~~---~~~  271 (422)
                      ++++.+++     .++|+++++|||||||.+++.+++++|++.    +++||+||+|.++.+++  ..   ...   +..
T Consensus       204 ~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~  283 (481)
T PTZ00377        204 ELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPA  283 (481)
T ss_pred             HHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcc
Confidence            99999863     178999999999999999999888888764    99999999999987632  11   111   111


Q ss_pred             ----CCcEEEEccChhh-hccccccceeeec---CHHHHHHHHHhcCC-CCCcHHHHHHHHHHccCC--------hHHH-
Q 014594          272 ----HDNLIVLRTFSKR-AGLAGLRVGYGAF---PLSIIEYLWRAKQP-YNVSVAAEVAACAALQNP--------IYLE-  333 (422)
Q Consensus       272 ----~~~~i~~~S~SK~-~~~~G~r~G~i~~---~~~~~~~l~~~~~~-~~~~~~~~~aa~~~L~~~--------~~~~-  333 (422)
                          ..++++++||||. ++++|+|+||+++   ++++++.+.+.... ++.+.++|.++..+|++.        .|.+ 
T Consensus       284 ~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~  363 (481)
T PTZ00377        284 EYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLASINLCSNVVGQLMTGLMCNPPREGDASYPLYKRE  363 (481)
T ss_pred             cccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhheecCCChHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence                1268999999997 6999999999986   89999999877654 478999999999999641        1433 


Q ss_pred             ---HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeC--CCC----------CHHHHHHH-HHhCCcEEEeCCCCC
Q 014594          334 ---VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVT--SGM----------DAKKLKDD-LAKMGVMIRHYNNKE  396 (422)
Q Consensus       334 ---~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~--~~~----------~~~~~~~~-L~~~gI~v~~~~~~~  396 (422)
                         .++.++++++.+.+.|++++++.+ .|++|+|+|++++  .+.          +...++.. |.++||.+.+|+.++
T Consensus       364 ~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~  443 (481)
T PTZ00377        364 RDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFG  443 (481)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccC
Confidence               334578999999999999855554 5678899997763  211          23344444 458899999998754


Q ss_pred             ---CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          397 ---LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       397 ---~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                         ..+++|||++.+  .+++.+++++|
T Consensus       444 ~~~~~~~~Rls~~~~--~e~l~~~l~rl  469 (481)
T PTZ00377        444 QKPGTYHFRITILPP--EEQIEEMVKKI  469 (481)
T ss_pred             CCCCCCEEEEEECCC--HHHHHHHHHHH
Confidence               356999999944  36687877776

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=100.00  E-value=2.5e-44  Score=354.57  Aligned_cols=319  Identities=21%  Similarity=0.313  Sum_probs=255.4

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhc-CC------CCCCC-CCcchHHHHHHHHHHc---CCCCCCEEEeCCHHHHHHHH
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQ-LK------FPYIY-PDPESRRLRAALAKDS---GLESDHILVGCGADELIDLI  162 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~------~~~~y-~~~~~~~lr~~la~~~---~~~~~~i~~~~G~~~al~~~  162 (422)
                      +.++++|+.|++++++++.+.+++.+ +.      ....| |..|..+||+++++++   ++++++|++|+|+++++..+
T Consensus        32 ~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al~~l  111 (402)
T TIGR03542        32 SADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDVFRL  111 (402)
T ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHHHHH
Confidence            46789999999999999988887765 21      12457 6678999999999986   68899999999999999987


Q ss_pred             HHHhcCCCCEEEEcCCCchhHHHHHHHcCC-----------EEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCC
Q 014594          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGA-----------AVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNN  229 (422)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~-----------~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~N  229 (422)
                      +. ++.+||+|+++.|+|..|...++..|+           +++.++.+.  ++..|++.      ..++++|++|||||
T Consensus       112 ~~-l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------~~~~~~i~l~nP~N  184 (402)
T TIGR03542       112 QS-LFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE------EPKIDIIYLCSPNN  184 (402)
T ss_pred             HH-hcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc------cCCceEEEEeCCCC
Confidence            54 678999999999999999999999999           999988642  34444321      25789999999999


Q ss_pred             ccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhc-CCcEEEEccChhhhccccccceeeecCHHH
Q 014594          230 PDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (422)
Q Consensus       230 PtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~  301 (422)
                      |||.+++.+++++|++.    +++||+||+|.+|.+++.   .....+. .+++++++||||.||++|+|+||+++++++
T Consensus       185 PTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~l  264 (402)
T TIGR03542       185 PTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKEL  264 (402)
T ss_pred             CCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecHHH
Confidence            99999999998888764    899999999999986542   1222222 367899999999999999999999999987


Q ss_pred             H--------HHHHH-hcCC-CCCcHHHHHHHHHHccCCh--HHH-HHHHHHHHHHHHHHHHccCCCCccc-CCCceEEEE
Q 014594          302 I--------EYLWR-AKQP-YNVSVAAEVAACAALQNPI--YLE-VKEALIKERERLFKLLKDVPFLNPY-PSYSNFILC  367 (422)
Q Consensus       302 ~--------~~l~~-~~~~-~~~~~~~~~aa~~~L~~~~--~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~f~~~  367 (422)
                      +        +.+.. .... .+++.+.|.++..++.+..  +.. .++.++++++.+.+.|++.+ +.+. +.+++|+|+
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~~~f~~v  343 (402)
T TIGR03542       265 TYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAAG-FKVYGGEHAPYLWV  343 (402)
T ss_pred             hhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhcC-ceecCCCceeEEEE
Confidence            7        22222 2223 3688899999999998754  344 67788999999999999876 4443 468899999


Q ss_pred             EeCCCCCHHHHHHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          368 EVTSGMDAKKLKDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       368 ~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      ++++..++.++.+.|. ++||.++++..++  ..+|+||+++..  .+++.+++++|+
T Consensus       344 ~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~--~~~l~~~l~~l~  399 (402)
T TIGR03542       344 KTPEGISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFGK--RENIVEACERIK  399 (402)
T ss_pred             ECCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCC--HHHHHHHHHHHH
Confidence            9987778889998887 6799999987643  358999998764  367999988863

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=100.00  E-value=5.5e-44  Score=346.85  Aligned_cols=325  Identities=24%  Similarity=0.334  Sum_probs=265.3

Q ss_pred             hHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCc-chHHHHHHHHHHc-------CCCCCCEEEeCC
Q 014594           83 FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDS-------GLESDHILVGCG  154 (422)
Q Consensus        83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~-~~~~lr~~la~~~-------~~~~~~i~~~~G  154 (422)
                      +...+.+....+.++++|+.|++..++++.+.+++.+......|+++ |..+||+++++++       ++++++|++|+|
T Consensus         9 ~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G   88 (357)
T TIGR03539         9 LAPYKAKAASHPDGIVDLSVGTPVDPVPPLIRAALAAAADAPGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIG   88 (357)
T ss_pred             HHHHHHHhhhCCCCeEEccCCCCCCCCCHHHHHHHHHHHhhCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccC
Confidence            34444545556678899999988788788888888764333678765 7899999999987       477899999999


Q ss_pred             HHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCc
Q 014594          155 ADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (422)
Q Consensus       155 ~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~  233 (422)
                      +++++..++..+ +++||.|+++.|+|+.+...++..|++++.++       |++.+    ...++++|++++|+||||.
T Consensus        89 ~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~-------~~~~l----~~~~~~~v~~~~p~NPtG~  157 (357)
T TIGR03539        89 TKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD-------DPTEL----DPVGPDLIWLNSPGNPTGR  157 (357)
T ss_pred             hHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC-------Chhhc----CccCccEEEEeCCCCCcCc
Confidence            999999999887 79999999999999999988899999998874       22322    2257899999999999999


Q ss_pred             CCCHHHHHHHHcC----CCeEEEccCCccccCCCchhhhhh------cCCcEEEEccChhhhccccccceeeecCHHHHH
Q 014594          234 IINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVK------KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (422)
Q Consensus       234 ~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~------~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~  303 (422)
                      +++.+++++|++.    |+++|+||+|.+|.+++.....+.      ..+++++++||||.|+++|+|+||+++++++++
T Consensus       158 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~~~~~  237 (357)
T TIGR03539       158 VLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDPALVA  237 (357)
T ss_pred             cCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCHHHHH
Confidence            9999998887653    999999999998876543222221      246899999999999999999999999999999


Q ss_pred             HHHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHH
Q 014594          304 YLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD  380 (422)
Q Consensus       304 ~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~  380 (422)
                      .+.+...  .++++.+.|.++.++|++..+.+ .++.++++++.+.+.|++.+.....|.++.|+|++++  .+..++.+
T Consensus       238 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p~~~~~~~~~~~--~~~~~~~~  315 (357)
T TIGR03539       238 ELLTVRKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKAGFRIDHSEAGLYLWATRG--EDAWDTVD  315 (357)
T ss_pred             HHHHHHhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCccEEEEEECC--CCHHHHHH
Confidence            8876654  36788999999999998877777 8889999999999999987633345667788999985  36778888


Q ss_pred             HHHhCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          381 DLAKMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       381 ~L~~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      .|.++||.+.++..++  .++++||+++.+  .+++.+++++|.
T Consensus       316 ~l~~~gV~v~pg~~f~~~~~~~iRis~~~~--~~~i~~~~~~l~  357 (357)
T TIGR03539       316 RLAELGILVAPGDFYGPAGSQHVRVALTAT--DERIAAAVARLT  357 (357)
T ss_pred             HHHhCCEEECCccccCCCCCCeEEEEecCC--HHHHHHHHHhhC
Confidence            9999999999987632  368999999985  378999998874

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=100.00  E-value=1.4e-43  Score=347.97  Aligned_cols=325  Identities=27%  Similarity=0.390  Sum_probs=265.7

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-C-CCCCC-CCcchHHHHHHHHHHc----CC--C-CCCEEEeCCHHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIY-PDPESRRLRAALAKDS----GL--E-SDHILVGCGADELIDLIMR  164 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~y-~~~~~~~lr~~la~~~----~~--~-~~~i~~~~G~~~al~~~~~  164 (422)
                      .++|+|+.|++++++++.+.+++.+. . ....| |..|..+||+++++++    ++  + +++|++|+|+++++.+++.
T Consensus        30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~  109 (391)
T PRK07309         30 PGILKLTLGEPDFTTPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLT  109 (391)
T ss_pred             CCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence            46899999999999998888888762 2 22457 4457899999999987    33  3 4799999999999999999


Q ss_pred             HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhc--CCCeEEEEeCCCCccCcCCCHHHHH
Q 014594          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLL  241 (422)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~e~l~  241 (422)
                      .++++||+|++++|+|..+...++..|++++.++.+. ++.+|++.+++++++  .+++++++++||||||.+++.++++
T Consensus       110 ~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~  189 (391)
T PRK07309        110 AILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIK  189 (391)
T ss_pred             HhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHH
Confidence            9999999999999999999999999999999999643 578999999999863  3689999999999999999988888


Q ss_pred             HHHcC----CCeEEEccCCccccCCC-chhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCC
Q 014594          242 KILEM----PILVVLDEAYTEFSGLE-SRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN  313 (422)
Q Consensus       242 ~i~~~----~~~li~Deay~~~~~~~-~~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~  313 (422)
                      +|++.    ++++|+||+|.++.+++ ....... ..+++++++||||.||++|+|+||+++++++++.+.....  ..+
T Consensus       190 ~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~~~~~~~~~~~  269 (391)
T PRK07309        190 ALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKSHQYLVTA  269 (391)
T ss_pred             HHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeCHHHHHHHHHHHhhcccC
Confidence            88763    99999999999988633 2111111 3478999999999999999999999999999999887643  246


Q ss_pred             CcHHHHHHHHHHccCCh-HHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCC--CHHHHHHHHH-hCCcE
Q 014594          314 VSVAAEVAACAALQNPI-YLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGM--DAKKLKDDLA-KMGVM  388 (422)
Q Consensus       314 ~~~~~~~aa~~~L~~~~-~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~--~~~~~~~~L~-~~gI~  388 (422)
                      ++.+.|.++..+|++.. +.. .++.++++++.+.+.|+++++....|.+++|+|+++|.+.  ++.++++.|. ++||.
T Consensus       270 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~  349 (391)
T PRK07309        270 ATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDLGFKIIKPDGAFYIFAKIPAGYNQDSFKFLQDFARKKAVA  349 (391)
T ss_pred             CChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEECCCCCCCCHHHHHHHHHHhCCEE
Confidence            78899999999998753 344 7788899999999999988643345667888999998543  5678887765 78999


Q ss_pred             EEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          389 IRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       389 v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +.++..+  ..+++|||+++.+  .+++.+++++|
T Consensus       350 v~pg~~f~~~~~~~iRi~~~~~--~~~l~~~i~~l  382 (391)
T PRK07309        350 FIPGAAFGPYGEGYVRLSYAAS--METIKEAMKRL  382 (391)
T ss_pred             EeCchhhCCCCCCEEEEEecCC--HHHHHHHHHHH
Confidence            9998863  3368999999864  36788877765

>PRK08363 alanine aminotransferase; Validated

Probab=100.00  E-value=1.3e-43  Score=349.35  Aligned_cols=328  Identities=25%  Similarity=0.367  Sum_probs=265.2

Q ss_pred             CCCCCCeEEcCCCCC---CCCCCHHHHHHHhcC-C-CCCCCC-CcchHHHHHHHHHHc------CCCCCCEEEeCCHHHH
Q 014594           91 GRKPEDIVKIDANEN---PYGPPPEVREALGQL-K-FPYIYP-DPESRRLRAALAKDS------GLESDHILVGCGADEL  158 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~---~~~~~~~v~~al~~~-~-~~~~y~-~~~~~~lr~~la~~~------~~~~~~i~~~~G~~~a  158 (422)
                      +..+.++|+|+.|.+   ++++++.+.+++.+. . ....|+ ..|..+||+++++++      ++++++|++|+|++++
T Consensus        26 ~~~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a  105 (398)
T PRK08363         26 EKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEA  105 (398)
T ss_pred             HhcCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence            345578999999998   788899999988763 2 225684 568999999999997      3688999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEe-cC-CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKV-PR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (422)
Q Consensus       159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (422)
                      +.+++.+++++||.|+++.|+|..+...++..|++++.+ +. ++++.+|++.+++.+. +++++++++|||||||.+++
T Consensus       106 l~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~  184 (398)
T PRK08363        106 LQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKIT-EKTKAIAVINPNNPTGALYE  184 (398)
T ss_pred             HHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCC-cceEEEEEECCCCCCCcCcC
Confidence            999999999999999999999999999999999999888 43 3567799999999986 68999999999999999999


Q ss_pred             HHHHHHHHcC----CCeEEEccCCccccCCCc--hhhhhhcCCcEEEEccChhhhccccccceeeec--CHHHHHHHHHh
Q 014594          237 DEDLLKILEM----PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--PLSIIEYLWRA  308 (422)
Q Consensus       237 ~e~l~~i~~~----~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~--~~~~~~~l~~~  308 (422)
                      .+++++|++.    ++++|+||+|.++.+.+.  ....+....++++++||||.|+++|+|+||+++  ++++++.+...
T Consensus       185 ~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~  264 (398)
T PRK08363        185 KKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREA  264 (398)
T ss_pred             HHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHHH
Confidence            8887777653    899999999998876442  223333456799999999999999999999997  77766665433


Q ss_pred             c-----CCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCccc-CCCceEEEEEeCCC--CCHHHH
Q 014594          309 K-----QPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPY-PSYSNFILCEVTSG--MDAKKL  378 (422)
Q Consensus       309 ~-----~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~f~~~~~~~~--~~~~~~  378 (422)
                      .     ..++.+.+.|.++..+|.+ .+|++ .+++++++++.+.+.|++++.+.+. |.+++|+|++++..  .+..++
T Consensus       265 ~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~~~~~  344 (398)
T PRK08363        265 IDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPRIEEGPWKDDKEF  344 (398)
T ss_pred             HHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEEEEEEeccCCCCCHHHH
Confidence            2     2367899999999999975 57887 8899999999999999988555544 56677888888752  245566


Q ss_pred             HHH-HHhCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          379 KDD-LAKMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       379 ~~~-L~~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +.. |.++||.++++..++  .++|+||+++.+  .+++.+++++|
T Consensus       345 ~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~--~~~l~~~l~~l  388 (398)
T PRK08363        345 VLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPP--VEILEEAMDRF  388 (398)
T ss_pred             HHHHHHhCCEEEeCchhhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            544 569999999988743  357999999854  36688887765

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=100.00  E-value=2.3e-43  Score=347.93  Aligned_cols=326  Identities=23%  Similarity=0.340  Sum_probs=268.1

Q ss_pred             CCCCeEEcCCCCCC----CCCCHHHHHHHhc-CC--CCCCC-CCcchHHHHHHHHHHcC------CCCCCEEEeCCHHHH
Q 014594           93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADEL  158 (422)
Q Consensus        93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~y-~~~~~~~lr~~la~~~~------~~~~~i~~~~G~~~a  158 (422)
                      ++.++++|+.|++.    +++++++.+++.+ +.  ....| +..|..++|++++++++      +++++|++|+|++++
T Consensus        29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~a  108 (403)
T TIGR01265        29 PEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQA  108 (403)
T ss_pred             cCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHH
Confidence            35689999999874    6788899888876 32  22467 55688999999999986      367899999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (422)
Q Consensus       159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (422)
                      +.+++++++++||+|+++.|+|..+...++..|++++.++.  ++++++|++.+++.+. ++++++++++||||||.+++
T Consensus       109 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~i~~p~NPtG~~~~  187 (403)
T TIGR01265       109 IEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALAD-EKTVAIVVINPSNPCGSVFS  187 (403)
T ss_pred             HHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhC-cCccEEEEecCCCCCCCCCC
Confidence            99999999999999999999999999999999999999885  3457899999999886 68999999999999999999


Q ss_pred             HHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecC--HH-----HH
Q 014594          237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP--LS-----II  302 (422)
Q Consensus       237 ~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~--~~-----~~  302 (422)
                      .+++++|++.    |+++|+||+|.+|.+++.   ....+....++++++||||.|+++|+|+||++++  ++     ++
T Consensus       188 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~  267 (403)
T TIGR01265       188 RDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVL  267 (403)
T ss_pred             HHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHH
Confidence            8887777653    999999999999886432   2223333457999999999999999999999983  22     44


Q ss_pred             HHHHHhcC-CCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCC-----
Q 014594          303 EYLWRAKQ-PYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSG-----  372 (422)
Q Consensus       303 ~~l~~~~~-~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~-----  372 (422)
                      +.+..... .++++.+.|.++..+|++  ..+++ .+++++++++.+.+.|+.++++. ..|++|+|+|++++..     
T Consensus       268 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~  347 (403)
T TIGR01265       268 QGLKNLLQRILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMYLMVKLELELFPEI  347 (403)
T ss_pred             HHHHHHhhhhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeEEEEeccccccCCC
Confidence            55555443 467899999999999975  36777 88899999999999999875455 4688999999999743     


Q ss_pred             CCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          373 MDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       373 ~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .++.++++.|. ++||.+.++..++.++++||+++.++  +.|.+++++|
T Consensus       348 ~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~~~--~~l~~~l~~l  395 (403)
T TIGR01265       348 KDDVDFCEKLVREESVICLPGSAFGLPNWVRITITVPE--SMLEEACSRI  395 (403)
T ss_pred             CCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecCCH--HHHHHHHHHH
Confidence            26788888865 88999999988777899999999754  5699998876

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>PRK06107 aspartate aminotransferase; Provisional

Probab=100.00  E-value=3.2e-43  Score=346.75  Aligned_cols=325  Identities=22%  Similarity=0.343  Sum_probs=270.4

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCc-chHHHHHHHHHHc----CC--CCCCEEEeCCHHHHHHHHHH
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDP-ESRRLRAALAKDS----GL--ESDHILVGCGADELIDLIMR  164 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~y~~~-~~~~lr~~la~~~----~~--~~~~i~~~~G~~~al~~~~~  164 (422)
                      +.++++|+.|.+++++++.+.+++.+. . ...+|+++ |..+||+++++++    |+  ++++|++|+|+++++..++.
T Consensus        32 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~  111 (402)
T PRK06107         32 GRSIVDLTVGEPDFDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALM  111 (402)
T ss_pred             cCCEEEcCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHH
Confidence            457899999999999889988888763 2 23568665 7899999998875    54  67899999999999999999


Q ss_pred             HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (422)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~  242 (422)
                      +++++||.|+++.|+|..|.......|++++.++.+  +++.+|++.+++.+. .++++++++||+||||.+++.+++++
T Consensus       112 ~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~s~~~~~~  190 (402)
T PRK06107        112 ATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAIT-PRTRWLILNAPSNPTGAVYSRAELRA  190 (402)
T ss_pred             HhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcC-cCceEEEEECCCCCCCcCcCHHHHHH
Confidence            999999999999999999988888889998888853  457799999999986 68999999999999999999999988


Q ss_pred             HHc----C-CCeEEEccCCccccCCCc---hhhhh-h-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--
Q 014594          243 ILE----M-PILVVLDEAYTEFSGLES---RMEWV-K-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--  310 (422)
Q Consensus       243 i~~----~-~~~li~Deay~~~~~~~~---~~~~~-~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--  310 (422)
                      |++    . ++++|+||+|.++.+.+.   ..... . ..+++++++||||.|+++|+|+||+++++++++.+.....  
T Consensus       191 l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~  270 (402)
T PRK06107        191 LADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADLIAAINKLQSQS  270 (402)
T ss_pred             HHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHHHHHHHHHHHHhc
Confidence            875    3 789999999998765432   11222 1 2468999999999999999999999999999999888765  


Q ss_pred             CCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeC--------CC---CCHH
Q 014594          311 PYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVT--------SG---MDAK  376 (422)
Q Consensus       311 ~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~--------~~---~~~~  376 (422)
                      .++++.+.|.++..+|+. ..|++ .++.++++++.+.+.|++++++.+ .|.+|+|+|++++        .+   .+..
T Consensus       271 ~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~  350 (402)
T PRK06107        271 SSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQ  350 (402)
T ss_pred             ccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEeeecccccccccccccCCCCHH
Confidence            467899999999999974 56777 888999999999999998755554 4678899999873        12   2566


Q ss_pred             HHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          377 KLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       377 ~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ++.+.|. ++||.+++|..++..+++||+++.+  .+++.+++++|
T Consensus       351 ~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~~--~e~l~~~l~~l  394 (402)
T PRK06107        351 DVVLYLLDSAGVAVVQGTAYGLSPYFRLSIATS--LETLEEACARI  394 (402)
T ss_pred             HHHHHHHHhCCEEEeCccccCCCCeEEEEeCCC--HHHHHHHHHHH
Confidence            7776665 7899999998877789999999975  47788888876

>PRK08354 putative aminotransferase; Provisional

Probab=100.00  E-value=4.4e-43  Score=334.00  Aligned_cols=297  Identities=28%  Similarity=0.414  Sum_probs=243.5

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD  171 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd  171 (422)
                      .+.++|+|+.|+|+++ |+.+.+++.+ ......||.  ...+|++++++++   ++|++|+|+++++.+++.. +.+||
T Consensus         6 ~~~~~i~l~~~~np~~-p~~~~~a~~~~~~~~~~yp~--~~~l~~~ia~~~~---~~I~vt~G~~~al~~~~~~-~~~gd   78 (311)
T PRK08354          6 REEGLIDFSASVNPYP-PEWLDEMFERAKEISGRYTY--YEWLEEEFSKLFG---EPIVITAGITEALYLIGIL-ALRDR   78 (311)
T ss_pred             CccceeEecCCCCCCC-CHHHHHHHHHHHHHhhcCCC--hHHHHHHHHHHHC---CCEEECCCHHHHHHHHHHh-hCCCC
Confidence            4567899999999997 5788888875 323356774  5789999999998   4899999999999988864 45899


Q ss_pred             EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC----C
Q 014594          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----P  247 (422)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~  247 (422)
                      +|+++.|+|..|...++..|++++.+      .+|++.+++.++  ++++++++|||||||.+++.+++++|++.    +
T Consensus        79 ~vlv~~P~y~~~~~~~~~~g~~~~~~------~~d~~~l~~~~~--~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~  150 (311)
T PRK08354         79 KVIIPRHTYGEYERVARFFAARIIKG------PNDPEKLEELVE--RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRN  150 (311)
T ss_pred             eEEEeCCCcHHHHHHHHHcCCEEeec------CCCHHHHHHhhc--CCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcC
Confidence            99999999999999999999999765      367899988875  56889999999999999999999999864    8


Q ss_pred             CeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHcc
Q 014594          248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ  327 (422)
Q Consensus       248 ~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~  327 (422)
                      +++|+||+|.+|.+++...    .++++++++||||.|+++|+|+||+++   +.+.+.....+++.+...+.++..+++
T Consensus       151 ~~li~De~y~~f~~~~~~~----~~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~~l~~~~~~~~~~~~~~~~~~~~~~  223 (311)
T PRK08354        151 ALLILDEAFIDFVKKPESP----EGENIIKLRTFTKSYGLPGIRVGYVKG---FEEAFRSVRMPWSIGSTGYAFLEFLIE  223 (311)
T ss_pred             cEEEEeCcchhcccccccc----CCCcEEEEeccHhhcCCccceeeeeee---hHHHHHHcCCCccCCHHHHHHHHHHHH
Confidence            9999999999998754221    367899999999999999999999998   567777777788888888888888887


Q ss_pred             CC-hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe
Q 014594          328 NP-IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV  405 (422)
Q Consensus       328 ~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~  405 (422)
                      +. +++. .++.++++++.+.+.+.       .++.++|++++++   +++++++.|+++||.++++..++.++++||++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~l~~~l~-------~~~~~~~~~~~~~---~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~  293 (311)
T PRK08354        224 DDFEHLRKTMPLIWREKERFEKALY-------VKSDANFFIKDVG---DAEKFVEFLKRNGILVRDCTSFGLPGYIRFSV  293 (311)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcC-------CCCCCcEEEEECC---CHHHHHHHHHHCCeEEEecccCCCCCeEEEEe
Confidence            53 3333 44555555555544431       3566778878764   57889999999999999998876679999999


Q ss_pred             cChhhHHHHHHHHhhh
Q 014594          406 GKPEHTDALMECLMHL  421 (422)
Q Consensus       406 ~~~~~~~~l~~al~~l  421 (422)
                      +.++++++|.++++.+
T Consensus       294 ~~~~~~~~l~~al~~~  309 (311)
T PRK08354        294 RDREENEKLIRALREW  309 (311)
T ss_pred             CCHHHHHHHHHHHHHh
Confidence            9988889999999876

>PRK07568 aspartate aminotransferase; Provisional

Probab=100.00  E-value=5.9e-43  Score=344.92  Aligned_cols=324  Identities=25%  Similarity=0.346  Sum_probs=265.9

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCC-cchHHHHHHHHHHc-----CCCCCCEEEeCCHHHHHHHHHHHh
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPD-PESRRLRAALAKDS-----GLESDHILVGCGADELIDLIMRCV  166 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~-~~~~~lr~~la~~~-----~~~~~~i~~~~G~~~al~~~~~~l  166 (422)
                      +.++++|+.|++++++++.+.+++.+. .....|+. .|..++|+++++++     ++++++|++|+|+++++..++..+
T Consensus        29 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l  108 (397)
T PRK07568         29 GIKVYHLNIGQPDIKTPEVFFEAIKNYDEEVLAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAI  108 (397)
T ss_pred             CCCEEEecCCCCCCCCCHHHHHHHHHHhcCCcCcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHh
Confidence            346899999999999999999998763 33356754 48999999999997     478899999999999999999999


Q ss_pred             cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCC-CHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594          167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSL-NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (422)
Q Consensus       167 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~-d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i  243 (422)
                      +++||+|++++|+|..+...++..|++++.++.+  +++.. |++++++.++ +++++|+++||+||||.+++.+++++|
T Consensus       109 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~i  187 (397)
T PRK07568        109 CDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLIT-PKTKAILISNPGNPTGVVYTKEELEML  187 (397)
T ss_pred             cCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcC-ccceEEEEECCCCCCCccCCHHHHHHH
Confidence            9999999999999999988888899999999964  34443 6799999986 689999999999999999998888887


Q ss_pred             HcC----CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcC-CCC
Q 014594          244 LEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQ-PYN  313 (422)
Q Consensus       244 ~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~-~~~  313 (422)
                      ++.    ++++|+||+|.+|.+++.   ...... ..+++++++||||.||++|+|+||++++ +++++.+.+... .++
T Consensus       188 ~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~  267 (397)
T PRK07568        188 AEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQARLS  267 (397)
T ss_pred             HHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhhccCC
Confidence            763    999999999999875432   122222 2678999999999999999999999985 788887765544 478


Q ss_pred             CcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCCCHHHHHHHHHh------
Q 014594          314 VSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLAK------  384 (422)
Q Consensus       314 ~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~~------  384 (422)
                      .+.+.|.++..+|++ .++++ .++.++++++.+.+.|++++.+. ..|.+++|+|++++. .+++++.+.|.+      
T Consensus       268 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~-~~~~~~~~~l~~~~~~~~  346 (397)
T PRK07568        268 PPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFYIIAKLPV-DDAEDFAKWLLTDFNYNG  346 (397)
T ss_pred             CCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceEEEEecCC-CCHHHHHHHHHhhccccc
Confidence            899999999999976 46777 88899999999999999885554 346777889999974 367889888874      


Q ss_pred             CCcEEEeCCCC----C-CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          385 MGVMIRHYNNK----E-LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       385 ~gI~v~~~~~~----~-~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +||.+.++..+    + .++++||+++...  +++.+++++|
T Consensus       347 ~gv~v~pg~~f~~~~~~~~~~iRls~~~~~--~~~~~~~~~l  386 (397)
T PRK07568        347 ETVMVAPASGFYATPGLGKNEIRIAYVLNE--EDLKRAMEIL  386 (397)
T ss_pred             ceEEEeCchHhcCCCCCCCCeEEEEEeCCH--HHHHHHHHHH
Confidence            69999997653    2 2479999998542  6677777765

>PRK05764 aspartate aminotransferase; Provisional

Probab=100.00  E-value=6.9e-43  Score=343.96  Aligned_cols=326  Identities=26%  Similarity=0.398  Sum_probs=270.3

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhc-C-CCCCCCC-CcchHHHHHHHHHHc------CCCCCCEEEeCCHHHHHHHHH
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQ-L-KFPYIYP-DPESRRLRAALAKDS------GLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~-~~~~~y~-~~~~~~lr~~la~~~------~~~~~~i~~~~G~~~al~~~~  163 (422)
                      .+.++++|+.+++++++++++.+++.+ + .....|+ ..|..+||+++++++      ++++++|++|+|+++++..++
T Consensus        29 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~  108 (393)
T PRK05764         29 QGRDVISLGAGEPDFDTPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAF  108 (393)
T ss_pred             ccCCEEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHH
Confidence            346789999999999988999888876 3 2234584 457899999999997      467889999999999999999


Q ss_pred             HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (422)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~  241 (422)
                      .+++++||.|+++.|+|..+...++..|++++.++.+  .++.+|++++++.++ ++++++++++|+||||.+++.++++
T Consensus       109 ~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~NPtG~~~~~~~~~  187 (393)
T PRK05764        109 MALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAIT-PKTKALILNSPSNPTGAVYSPEELE  187 (393)
T ss_pred             HHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhC-ccceEEEEECCCCCCCcccCHHHHH
Confidence            9999999999999999999999999999999999964  457899999999986 6899999999999999999988888


Q ss_pred             HHHcC----CCeEEEccCCccccCCCc---hhhhh--hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC-
Q 014594          242 KILEM----PILVVLDEAYTEFSGLES---RMEWV--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-  311 (422)
Q Consensus       242 ~i~~~----~~~li~Deay~~~~~~~~---~~~~~--~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~-  311 (422)
                      +|++.    ++++|+||+|.++.+++.   ....+  +..+++++++||||.++++|+|+||+++++++++.+...... 
T Consensus       188 ~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~~~~~~~~~~~~~  267 (393)
T PRK05764        188 AIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPKELIKAMSKLQSHS  267 (393)
T ss_pred             HHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecCHHHHHHHHHHHhhc
Confidence            77653    999999999998875432   22222  335789999999999999999999999999999998876653 


Q ss_pred             -CCCcHHHHHHHHHHcc-CChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCCCC-----CHHHHHHHH
Q 014594          312 -YNVSVAAEVAACAALQ-NPIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGM-----DAKKLKDDL  382 (422)
Q Consensus       312 -~~~~~~~~~aa~~~L~-~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~~-----~~~~~~~~L  382 (422)
                       ++++.+.|.++..+|+ ..++++ .++.++++++.+.+.|++++.+.+ .|.+++|+|++++...     ++.++.+.|
T Consensus       268 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l  347 (393)
T PRK05764        268 TSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAFYVFPNVSKLLGKSITDSLEFAEAL  347 (393)
T ss_pred             ccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcceEEEEecccccccccCCHHHHHHHH
Confidence             5788999999999997 356777 888899999999999998844443 4666789999987543     357888887


Q ss_pred             H-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          383 A-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       383 ~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      . ++||.++++..+..++++||+++.+.  +++.+++++|
T Consensus       348 ~~~~gi~v~~g~~f~~~~~vRis~~~~~--~~~~~~i~~l  385 (393)
T PRK05764        348 LEEAGVAVVPGIAFGAPGYVRLSYATSL--EDLEEGLERI  385 (393)
T ss_pred             HHhCCEEEccccccCCCCEEEEEecCCH--HHHHHHHHHH
Confidence            6 68999999877666899999998743  6677777765

>PRK06225 aspartate aminotransferase; Provisional

Probab=100.00  E-value=2.1e-42  Score=338.74  Aligned_cols=323  Identities=27%  Similarity=0.443  Sum_probs=266.2

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCC
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDP  169 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~  169 (422)
                      +.++|+|+.|++++++++.+.+++.+. .  ....|+++ |..++|+++++++++++++|++|+|+++++..++++++.+
T Consensus        27 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~~~  106 (380)
T PRK06225         27 DKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMRAFLSP  106 (380)
T ss_pred             cCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhcCC
Confidence            356899999999999999999998763 2  22457655 7899999999999999999999999999999999999999


Q ss_pred             CCEEEEcCCCchhHHHHHHHcCCEEEEecCC---CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC
Q 014594          170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM  246 (422)
Q Consensus       170 gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~  246 (422)
                      ||+|++++|+|..+...++..|++++.++.+   .++.+|++.+++.+. +++++++++||+||||.+++.+++++|++.
T Consensus       107 gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NptG~~~~~~~~~~i~~~  185 (380)
T PRK06225        107 GDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMD-ENTRLIYLIDPLNPLGSSYTEEEIKEFAEI  185 (380)
T ss_pred             CCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcC-CCceEEEEeCCCCCCCcCCCHHHHHHHHHH
Confidence            9999999999998888888999999999853   257899999999987 689999999999999999998888888764


Q ss_pred             ----CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC-CCCCcHHHHHH
Q 014594          247 ----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-PYNVSVAAEVA  321 (422)
Q Consensus       247 ----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~-~~~~~~~~~~a  321 (422)
                          |+++|+||+|.+|..+....... ..++++++.||||.+|++|+|+||+++++++++.+..... .++.+.+.|.+
T Consensus       186 a~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l~~~~~~~~~~~~~~~~~~~~~  264 (380)
T PRK06225        186 ARDNDAFLLHDCTYRDFAREHTLAAEY-APEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKSIVINDLGTNVIAQEA  264 (380)
T ss_pred             HHHCCcEEEEehhHHHHhccCCchhhc-CCCCEEEEeechhhcCCccceeEEEecCHHHHHHHHHHHhcccCCCHHHHHH
Confidence                99999999999876433222222 3478899999999999999999999999999998877643 57788999999


Q ss_pred             HHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCC--cccCCCceEEEEEeCC-CCCHHHHHHHHHhCCcEEEeCCCC-
Q 014594          322 ACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFL--NPYPSYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRHYNNK-  395 (422)
Q Consensus       322 a~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~--~~~p~~~~f~~~~~~~-~~~~~~~~~~L~~~gI~v~~~~~~-  395 (422)
                      +..+|.. .+|.+ .++.++++++.+.+.|++++..  ...|.+++|+|++++. +.+..++.+.|.++||.++++..+ 
T Consensus       265 a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~  344 (380)
T PRK06225        265 AIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTS  344 (380)
T ss_pred             HHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcccccCCHHHHHHHHHHCCEEEcCCcccC
Confidence            8888865 46767 7777888888899999886433  2457789999999864 568899999999999999987542 


Q ss_pred             --CCCCeEEEEecCh-hhHHHHHHHH
Q 014594          396 --ELKGYVRVSVGKP-EHTDALMECL  418 (422)
Q Consensus       396 --~~~~~iRis~~~~-~~~~~l~~al  418 (422)
                        ..++++|++++.+ ++++++.++|
T Consensus       345 ~~~~~~~iR~s~~~~~e~l~~~~~~l  370 (380)
T PRK06225        345 KRFGDRYIRVSFSIPREQVEVFCEEF  370 (380)
T ss_pred             cCCCCceEEEEeCCCHHHHHHHHHHH
Confidence              2357999999864 3344444443

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=100.00  E-value=1.6e-42  Score=344.49  Aligned_cols=324  Identities=26%  Similarity=0.395  Sum_probs=271.7

Q ss_pred             CCeEEcCCCCCCCC--CCHHHHHHHhcC----C-C-CCCCCC-cchHHHHHHHHHHc----C--CCCCCEEEeCCHHHHH
Q 014594           95 EDIVKIDANENPYG--PPPEVREALGQL----K-F-PYIYPD-PESRRLRAALAKDS----G--LESDHILVGCGADELI  159 (422)
Q Consensus        95 ~~~i~l~~~~~~~~--~~~~v~~al~~~----~-~-~~~y~~-~~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al  159 (422)
                      .+.++|+.+.++..  +.....+++.+.    . . ...|.. .|..+||+++++++    |  +++++|++|+|+++++
T Consensus        89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al  168 (459)
T COG1167          89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQAL  168 (459)
T ss_pred             CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHH
Confidence            66789988865442  233444444331    1 1 245644 68999999999987    3  5778999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEe-CCCCccCcCCCHH
Q 014594          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDE  238 (422)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~e  238 (422)
                      +++++.+++|||+|++++|+|......++..|++++.||.+ +.++|+|.|++.+.+.++|++|++ +.+||||.+++.+
T Consensus       169 ~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d-~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~  247 (459)
T COG1167         169 DLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVD-EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLE  247 (459)
T ss_pred             HHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCC-CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHH
Confidence            99999999999999999999999999999999999999987 459999999999987789999998 8899999999999


Q ss_pred             HHHHHHcC----CCeEEEccCCccccCCCch---hhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC
Q 014594          239 DLLKILEM----PILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (422)
Q Consensus       239 ~l~~i~~~----~~~li~Deay~~~~~~~~~---~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~  311 (422)
                      +.++|++.    +++||+||.|++|.+++..   +...+..+++++++||||.+. ||+|+||+++++++++.+...+..
T Consensus       248 rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~-PglRlG~vv~p~~~~~~~~~~k~~  326 (459)
T COG1167         248 RRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLA-PGLRLGYVVAPPELIEKLLRLKQA  326 (459)
T ss_pred             HHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcc-cccceeeeeCCHHHHHHHHHHHHH
Confidence            99998875    9999999999999876433   355666799999999999986 999999999999999999876654


Q ss_pred             --CCCcHHHHHHHHHHccCC---hHHH-HHHHHHHHHHHHHHHHccCC--CCc-ccCCCceEEEEEeCCCCCHHHHHHHH
Q 014594          312 --YNVSVAAEVAACAALQNP---IYLE-VKEALIKERERLFKLLKDVP--FLN-PYPSYSNFILCEVTSGMDAKKLKDDL  382 (422)
Q Consensus       312 --~~~~~~~~~aa~~~L~~~---~~~~-~~~~~~~~~~~l~~~L~~~~--~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L  382 (422)
                        .+.+.+.|.++...+.++   .++. +++.++++++.+.+.|+++.  ... ..|.+|+|+|+++|++.+..++.+.+
T Consensus       327 ~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~~~~~~l~~~a  406 (459)
T COG1167         327 ADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEGIDARELLAAA  406 (459)
T ss_pred             hcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCCCCHHHHHHHH
Confidence              678999999999998865   3455 88899999999999999864  223 35788999999999999999999999


Q ss_pred             HhCCcEEEe-CCCCC----CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          383 AKMGVMIRH-YNNKE----LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       383 ~~~gI~v~~-~~~~~----~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +++||.+.+ +..+.    ..+++|++|+...+ +++.+++++|
T Consensus       407 ~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~-e~i~~gi~~l  449 (459)
T COG1167         407 LEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSE-EEIEEGIKRL  449 (459)
T ss_pred             HHCCCEEEcCCccccCCCCCCCeEEEEcCCCCH-HHHHHHHHHH
Confidence            999999998 55422    35699999998764 7888888765

>PRK08175 aminotransferase; Validated

Probab=100.00  E-value=1.9e-42  Score=340.57  Aligned_cols=325  Identities=23%  Similarity=0.306  Sum_probs=263.7

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhc-C--CCCCCCCCc-chHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHHH
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQ-L--KFPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLI  162 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~--~~~~~y~~~-~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~~~  162 (422)
                      +.++++|+.+.++..+++.+.+++.+ .  .....|+++ |..+||+++++++    |  ++++ +|++|+|+++++..+
T Consensus        28 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~  107 (395)
T PRK08175         28 GEDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHL  107 (395)
T ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHH
Confidence            46789999998877777767776654 2  223668655 7899999999986    3  4566 899999999999999


Q ss_pred             HHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCccCcCCCHHHH
Q 014594          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDL  240 (422)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~e~l  240 (422)
                      +..++++||+|++++|+|+.+...++..|++++.++.+.+ +.+++.++++++.  .++++|++++||||||.+++.+++
T Consensus       108 ~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~  186 (395)
T PRK08175        108 MLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEG-VDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFF  186 (395)
T ss_pred             HHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccC-CCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHH
Confidence            9999999999999999999988888889999999997544 3457888888763  478999999999999999999888


Q ss_pred             HHHHcC----CCeEEEccCCccccCCCch---hhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--
Q 014594          241 LKILEM----PILVVLDEAYTEFSGLESR---MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--  310 (422)
Q Consensus       241 ~~i~~~----~~~li~Deay~~~~~~~~~---~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--  310 (422)
                      ++|++.    |+++|+||+|.++.+++..   ..... ..+++++++||||.||++|+|+||+++++++++.+.+...  
T Consensus       187 ~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~l~~~~~~~~~~~  266 (395)
T PRK08175        187 EKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYH  266 (395)
T ss_pred             HHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCHHHHHHHHHHHhhc
Confidence            887754    9999999999998764321   11122 2467889999999999999999999999999999887664  


Q ss_pred             CCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCC---CHHHHHHHHH-h
Q 014594          311 PYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGM---DAKKLKDDLA-K  384 (422)
Q Consensus       311 ~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~---~~~~~~~~L~-~  384 (422)
                      .++.+.+.|.++..+|++ ..+++ +++.++++++.+.+.|+++++....|++|+|+|+++++..   ++.++++.|. +
T Consensus       267 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~~g~~i~i~l~~~~~~~~~~~~~~~l~~~  346 (395)
T PRK08175        267 DYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNE  346 (395)
T ss_pred             ccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCEEEEEEEECCcccCCCCHHHHHHHHHHh
Confidence            466778889988888875 45677 8899999999999999998743345778999999998643   4788988776 7


Q ss_pred             CCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          385 MGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       385 ~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +||.|.++..+  ..++++||+++.  +.+.+.+++++|
T Consensus       347 ~gv~v~p~~~f~~~~~~~lRis~~~--~~~~~~~al~~l  383 (395)
T PRK08175        347 AKVCVSPGIGFGDYGDTHVRFALIE--NRDRIRQAIRGI  383 (395)
T ss_pred             CCEEEeCchhhCcCCCCeEEEEeCC--CHHHHHHHHHHH
Confidence            89999998763  235799999984  347889888876

>PRK07777 aminotransferase; Validated

Probab=100.00  E-value=4.4e-42  Score=337.30  Aligned_cols=325  Identities=25%  Similarity=0.389  Sum_probs=264.6

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCC-cchHHHHHHHHHHc----CC--CCC-CEEEeCCHHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKDS----GL--ESD-HILVGCGADELIDLIMR  164 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~~-~~~~~lr~~la~~~----~~--~~~-~i~~~~G~~~al~~~~~  164 (422)
                      .++++|+.|.++.+.++.+.+++.+ +. ....|++ .|..++|+++++++    |+  +++ +|++|+|+++++..++.
T Consensus        24 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~  103 (387)
T PRK07777         24 TGAVNLGQGFPDEDGPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVL  103 (387)
T ss_pred             CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHH
Confidence            3679999999888777777777665 22 2256865 47899999999873    54  354 79999999999999999


Q ss_pred             HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC---CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (422)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~---~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~  241 (422)
                      +++++||+|+++.|+|..+...++..|++++.++.++   ++.+|++++++.+. +++++|++++||||||.+++.++++
T Consensus       104 ~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~~~~  182 (387)
T PRK07777        104 GLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVT-PRTRALIVNSPHNPTGTVLTAAELA  182 (387)
T ss_pred             HhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcC-cccEEEEEcCCCCCCCccCCHHHHH
Confidence            9999999999999999999999999999999998643   46799999999987 6899999999999999999988888


Q ss_pred             HHHcC----CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--C
Q 014594          242 KILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--P  311 (422)
Q Consensus       242 ~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~  311 (422)
                      +|++.    ++++|+||+|.++.+.+.   ...... ..+++++++||||.||++|+|+||+++++++++.+.....  .
T Consensus       183 ~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~~~~~~~~~~  262 (387)
T PRK07777        183 AIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPLIAAVRAAKQYLT  262 (387)
T ss_pred             HHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhcc
Confidence            87663    999999999998875332   122222 2568999999999999999999999999999998887654  4


Q ss_pred             CCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC--CCCHHHHHHHHH-hCC
Q 014594          312 YNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS--GMDAKKLKDDLA-KMG  386 (422)
Q Consensus       312 ~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~--~~~~~~~~~~L~-~~g  386 (422)
                      ++.+.+.|.++..++.+ ..|++ .++.++++++.+.+.|+++++....+.+++|+|++++.  ..++.++++.|+ ++|
T Consensus       263 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~g  342 (387)
T PRK07777        263 YVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEAGFEVHDSAGTYFLCADPRPLGYDDGTEFCRALPERVG  342 (387)
T ss_pred             cCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCccCCCcceEEEecccccCCCCHHHHHHHHHHhCC
Confidence            66777888888888875 46777 88999999999999999886433345677889999752  347889999997 789


Q ss_pred             cEEEeCCCC-----CCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          387 VMIRHYNNK-----ELKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       387 I~v~~~~~~-----~~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      |.|.++..+     ..++++||+++.+  .+++.+++++|+
T Consensus       343 v~v~pg~~f~~~~~~~~~~~Ri~~~~~--~~~l~~~l~~l~  381 (387)
T PRK07777        343 VAAIPMSVFYDPADAWNHLVRFAFCKR--DDTLDEAIRRLR  381 (387)
T ss_pred             EEEeCchHhCCCCcCCCCeEEEEecCC--HHHHHHHHHHHH
Confidence            999998753     2257999999974  377999988763

>PRK09275 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-42  Score=345.83  Aligned_cols=321  Identities=21%  Similarity=0.270  Sum_probs=248.5

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCc-chHHHHHHHHHHc------C-C-C--CCCEEEeCCHHHHHHHHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDS------G-L-E--SDHILVGCGADELIDLIMR  164 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~-~~~~lr~~la~~~------~-~-~--~~~i~~~~G~~~al~~~~~  164 (422)
                      ++|+|+.|++++++++.+.++...+. +..||.+ |..++|+++++++      + . .  +++|++|+|+++++..++.
T Consensus       101 ~~i~l~~g~p~~~~~~~v~e~~~~~~-~~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~  179 (527)
T PRK09275        101 DAVSYVRDQLGFDADEFVYELVDGII-GDNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFD  179 (527)
T ss_pred             HHHhhcCCCCCCCCCHHHHHHHHHHh-cCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHH
Confidence            57999999999999888888665543 2459765 8999999999843      1 1 2  2489999999999999988


Q ss_pred             H-----hcCCCCEEEEcCCCchhHHHHHHHcC--CEEEEecC--CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594          165 C-----VLDPGDKIVDCPPTFTMYEFDAAVNG--AAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (422)
Q Consensus       165 ~-----l~~~gd~Vl~~~p~y~~~~~~~~~~g--~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (422)
                      +     +++|||+|+++.|+|+.|...++..|  ++++.++.  +++|.+|+++++++++ +++|+|+++|||||||.++
T Consensus       180 aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~-~~tkai~l~nP~NPTG~v~  258 (527)
T PRK09275        180 SLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRD-PSIKALFLVNPSNPPSVAM  258 (527)
T ss_pred             HHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC-CCCCEEEEeCCcCCcCCCC
Confidence            6     68999999999999999999888765  55666653  3568999999999886 7999999999999999999


Q ss_pred             CHHHHHHHHcC------CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHH-----HHHH
Q 014594          236 NDEDLLKILEM------PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-----IIEY  304 (422)
Q Consensus       236 ~~e~l~~i~~~------~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~-----~~~~  304 (422)
                      +.+++++|++.      +++||+||+|.+|.+........ ..+++|+++||||.|+++|||+||++++++     +++.
T Consensus       259 s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~-~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~  337 (527)
T PRK09275        259 SDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAV-LPYNTILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAK  337 (527)
T ss_pred             CHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHh-CCCCEEEEeehhhhccCcHhHHhhhhcCchhHHHHHHHh
Confidence            99998887642      79999999999987532222111 347899999999999999999999999876     4332


Q ss_pred             H--------------------------------HHhcC--CCCCcHHHHHH-----HHHHccC-ChHHH-HHHHHHHHHH
Q 014594          305 L--------------------------------WRAKQ--PYNVSVAAEVA-----ACAALQN-PIYLE-VKEALIKERE  343 (422)
Q Consensus       305 l--------------------------------~~~~~--~~~~~~~~~~a-----a~~~L~~-~~~~~-~~~~~~~~~~  343 (422)
                      +                                .+...  ..+++.+.|.+     +.++|+. ..|.+ +++.++++++
T Consensus       338 l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~~~~~~~~~Rr~  417 (527)
T PRK09275        338 LPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYKKAMKDIIRRRYK  417 (527)
T ss_pred             ccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence            2                                22222  35677777776     3345654 46777 8999999999


Q ss_pred             HHHHHHccCCCCcccCCCceEEEEEeCC----------------CCCHHHHHHHHH-hCCcEEEeCCCCC-CCCeEEEEe
Q 014594          344 RLFKLLKDVPFLNPYPSYSNFILCEVTS----------------GMDAKKLKDDLA-KMGVMIRHYNNKE-LKGYVRVSV  405 (422)
Q Consensus       344 ~l~~~L~~~~~~~~~p~~~~f~~~~~~~----------------~~~~~~~~~~L~-~~gI~v~~~~~~~-~~~~iRis~  405 (422)
                      .+.+.|. ++.....|.+++|+|++++.                ..+..+++..|. +.||.+.||..++ .++++|||+
T Consensus       418 ~l~~~Lg-~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~  496 (527)
T PRK09275        418 ALYEGLG-LPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEWSVRVSL  496 (527)
T ss_pred             HHHHHcC-CCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCCeEEEEE
Confidence            9999984 33222357888999999863                125778888887 7899999998864 367999999


Q ss_pred             cChhhHHHHHHHHhhh
Q 014594          406 GKPEHTDALMECLMHL  421 (422)
Q Consensus       406 ~~~~~~~~l~~al~~l  421 (422)
                      +...+ +.+.++.++|
T Consensus       497 a~~~~-~~~~~~~~rl  511 (527)
T PRK09275        497 ANLNE-EDYAKIGKAI  511 (527)
T ss_pred             ecCCH-HHHHHHHHHH
Confidence            86432 5577776665

>PRK06836 aspartate aminotransferase; Provisional

Probab=100.00  E-value=7.6e-42  Score=336.10  Aligned_cols=321  Identities=25%  Similarity=0.405  Sum_probs=262.6

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-C----CCCCC-CCcchHHHHHHHHHHcC------CCCCCEEEeCCHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-K----FPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADELIDLI  162 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~----~~~~y-~~~~~~~lr~~la~~~~------~~~~~i~~~~G~~~al~~~  162 (422)
                      .++++|+.+.+++++++.+.+++.+. .    ....| +..|..++|++++++++      +++++|++|+|+++++..+
T Consensus        33 ~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~  112 (394)
T PRK06836         33 DNVFDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVA  112 (394)
T ss_pred             CCeEEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHH
Confidence            46799999988888888888888652 1    13567 55689999999999873      5789999999999999999


Q ss_pred             HHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCC-CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (422)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~  241 (422)
                      ++.++++||.|+++.|+|..+...++..|++++.++.+++ +++|++++++.++ ++++++++++||||||.+++.+++.
T Consensus       113 ~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~NPtG~~~~~~~~~  191 (394)
T PRK06836        113 LKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAIT-PKTKAVIINSPNNPTGVVYSEETLK  191 (394)
T ss_pred             HHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcC-cCceEEEEeCCCCCCCcCCCHHHHH
Confidence            9999999999999999999999998999999999997554 7899999999996 6899999999999999999999998


Q ss_pred             HHHc---C-------CCeEEEccCCccccCCCc-hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHH------
Q 014594          242 KILE---M-------PILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY------  304 (422)
Q Consensus       242 ~i~~---~-------~~~li~Deay~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~------  304 (422)
                      +|++   .       ++++|+||+|.+|.+++. ........+++++++||||.||+||+|+||+++++++.+.      
T Consensus       192 ~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~  271 (394)
T PRK06836        192 ALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVNPEMEDADDLVAA  271 (394)
T ss_pred             HHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEecCHHHhhhHHHHHH
Confidence            8853   2       689999999999876542 2222334678999999999999999999999998876432      


Q ss_pred             HHHhcC---CCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHH
Q 014594          305 LWRAKQ---PYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDD  381 (422)
Q Consensus       305 l~~~~~---~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~  381 (422)
                      +.....   .++.+.+.|.++..++++..   .++.++++++.+.+.|+++++....|.+++|+|+++|. .+..++++.
T Consensus       272 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~---~~~~~~~~r~~l~~~L~~~g~~~~~~~gg~~~~~~~~~-~~~~~~~~~  347 (394)
T PRK06836        272 LVFANRILGFVNAPALMQRVVAKCLDATV---DVSIYKRNRDLLYDGLTELGFECVKPQGAFYLFPKSPE-EDDVAFCEK  347 (394)
T ss_pred             HHHHhhccccccCCHHHHHHHHHHhCChH---HHHHHHHHHHHHHHHHHhCCCEeecCCceEEEEEeCCC-CCHHHHHHH
Confidence            211111   24678889999999997642   35567888999999999887433456778999999975 578889988


Q ss_pred             HHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          382 LAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       382 L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      |.++||.++++..+...+++||+++.+  .+++.+++++|+
T Consensus       348 l~~~gv~v~~g~~f~~~~~iRi~~~~~--~~~~~~~i~~l~  386 (394)
T PRK06836        348 AKKHNLLLVPGSGFGCPGYFRLSYCVD--TETIERSLPAFE  386 (394)
T ss_pred             HHhCCEEEECchhcCCCCeEEEEecCC--HHHHHHHHHHHH
Confidence            889999999988766678999999853  477888887763

>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=4.8e-42  Score=312.12  Aligned_cols=325  Identities=21%  Similarity=0.305  Sum_probs=276.7

Q ss_pred             CCeEEcCCCCCC----CCCCHHHHHHHhc-CC--CCCCC-CCcchHHHHHHHHHHc------CCCCCCEEEeCCHHHHHH
Q 014594           95 EDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELID  160 (422)
Q Consensus        95 ~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~y-~~~~~~~lr~~la~~~------~~~~~~i~~~~G~~~al~  160 (422)
                      .++|.|+.|++.    +.+.+++.+|+.+ +.  ..++| |..|....|+++|+++      .+++++|++|+|..+|++
T Consensus        61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe  140 (447)
T KOG0259|consen   61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIE  140 (447)
T ss_pred             ceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHH
Confidence            478999999864    4567888888876 32  23778 7779999999999995      257889999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEec--CCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHH
Q 014594          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (422)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e  238 (422)
                      +++.++.+||..|+++.|+|+.|...+...|.++..++  .+.+|.+|++.+|+.+. ++|.+++++||+||+|.+++.+
T Consensus       141 ~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~D-ENT~AivviNP~NPcGnVys~~  219 (447)
T KOG0259|consen  141 LAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALAD-ENTVAIVVINPNNPCGNVYSED  219 (447)
T ss_pred             HHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhc-cCeeEEEEeCCCCCCcccccHH
Confidence            99999999999999999999999999999999999998  46789999999999998 7999999999999999999999


Q ss_pred             HHHHHHcC----CCeEEEccCCccccCCCch---hhhhhcCCcEEEEccChhhhccccccceeeecC--------HHHHH
Q 014594          239 DLLKILEM----PILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP--------LSIIE  303 (422)
Q Consensus       239 ~l~~i~~~----~~~li~Deay~~~~~~~~~---~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~--------~~~~~  303 (422)
                      -|++|++.    ++.+|.||+|.++.+++..   +..+...--+++++|+||.|-.||||+||++..        ..+++
T Consensus       220 HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q  299 (447)
T KOG0259|consen  220 HLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQ  299 (447)
T ss_pred             HHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccchHHHH
Confidence            99998874    9999999999999876543   233333445799999999999999999999972        34445


Q ss_pred             HHHHhcC-CCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCc--ccCCCceEEEEEeC-----CC
Q 014594          304 YLWRAKQ-PYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVT-----SG  372 (422)
Q Consensus       304 ~l~~~~~-~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~f~~~~~~-----~~  372 (422)
                      .+.+..+ ..+++++.|.|.-..|+.  +++.+ ....++.+.+...+.|++++.+.  +.|++.+|+|+++.     +-
T Consensus       300 ~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~~~  379 (447)
T KOG0259|consen  300 GIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLFPDI  379 (447)
T ss_pred             HHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhhccc
Confidence            5555444 357788999999999986  47778 88999999999999999999876  47899999998764     34


Q ss_pred             CCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          373 MDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       373 ~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      .|..+|++.|. |..+.+.||..++.++|+||+++.+++  .+++|+.||+
T Consensus       380 ~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~~~~--~leea~~Rik  428 (447)
T KOG0259|consen  380 EDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITVEEE--MLEEAFSRIK  428 (447)
T ss_pred             cccHHHHHHHhhhcceEEeccccccCCCeEEEEEccChH--HHHHHHHHHH
Confidence            57788999997 889999999999999999999998874  4899988874

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=100.00  E-value=3e-43  Score=343.01  Aligned_cols=324  Identities=31%  Similarity=0.526  Sum_probs=273.1

Q ss_pred             CeEEcCCCCCCCC----CCHHHHHHHhc----CCCCCCCCCc-chHHHHHHHHHHcC------CCCC-CEEEeCCHHHHH
Q 014594           96 DIVKIDANENPYG----PPPEVREALGQ----LKFPYIYPDP-ESRRLRAALAKDSG------LESD-HILVGCGADELI  159 (422)
Q Consensus        96 ~~i~l~~~~~~~~----~~~~v~~al~~----~~~~~~y~~~-~~~~lr~~la~~~~------~~~~-~i~~~~G~~~al  159 (422)
                      ++|+|+.|+++..    ++++..+++.+    ......|+++ |..+||++++++++      ++++ +|++++|+.+++
T Consensus         2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~   81 (363)
T PF00155_consen    2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL   81 (363)
T ss_dssp             TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred             CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence            5799999999987    55666666543    2334778665 69999999999997      7788 999999999999


Q ss_pred             HHHHHHh-cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCcc
Q 014594          160 DLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVERE-----KPKCIFLTSPNNPD  231 (422)
Q Consensus       160 ~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPt  231 (422)
                      ..++..+ .++||+|+++.|+|+.|...++..|++++.++.  +.++++|++++++.+++.     +++++++++|||||
T Consensus        82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPt  161 (363)
T PF00155_consen   82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPT  161 (363)
T ss_dssp             HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTT
T ss_pred             hhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccc
Confidence            9999988 789999999999999999999999999999994  477899999999999742     57899999999999


Q ss_pred             CcCCCHHHHHHHHcC----CCeEEEccCCccccCCCch----hhhhhcCCcEEEEccChhhhccccccceeeecCHHHHH
Q 014594          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR----MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (422)
Q Consensus       232 G~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~----~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~  303 (422)
                      |.+++.+++++|++.    ++++|+||+|.++.++...    ...+....++++++||||.||++|+|+||+++++++++
T Consensus       162 G~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~~~  241 (363)
T PF00155_consen  162 GSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPPELIE  241 (363)
T ss_dssp             TBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEHHHHH
T ss_pred             ccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccchhhhhh
Confidence            999999999999543    9999999999999876432    34455566799999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcHHHHHHHHHHccCCh----HHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHH
Q 014594          304 YLWRAKQPYNVSVAAEVAACAALQNPI----YLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL  378 (422)
Q Consensus       304 ~l~~~~~~~~~~~~~~~aa~~~L~~~~----~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~  378 (422)
                      .+......+..+.+.+.++.+++.+..    +++ ++++++++++.+.+.|++.++....+..++|+|+.++.. ++.++
T Consensus       242 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~~l  320 (363)
T PF00155_consen  242 RLRRFQRSGLSSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGITVLPPEAGFFLWVRLDPN-DAEEL  320 (363)
T ss_dssp             HHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEHHSBSSEEEEEESHH-HHHHH
T ss_pred             hhhhccccccccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhhheeeccCccEEEEEcccc-hHHHH
Confidence            999888887779999999999998764    667 999999999999999998864444566888999998633 67899


Q ss_pred             HHHHHhC-CcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          379 KDDLAKM-GVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       379 ~~~L~~~-gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .+.|.++ ||.+.++..+..++++||+++..+ .+++++++++|
T Consensus       321 ~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~-~e~~~~~~~~l  363 (363)
T PF00155_consen  321 AQELLEEYGILVRPGSYFGVPGYIRISLASHS-EEDLEEALERL  363 (363)
T ss_dssp             HHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSC-HHHHHHHHHHH
T ss_pred             HHHHHHhCCEEEEecCCCCCCCEEEEEeccCC-HHHHHHHHhhC
Confidence            9999976 999999888766999999994332 36677777765

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>PLN02672 methionine S-methyltransferase

Probab=100.00  E-value=1.1e-41  Score=357.42  Aligned_cols=327  Identities=16%  Similarity=0.245  Sum_probs=254.3

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCC-CCCCCcc-hHHHHHHHHHHcCCCCC---CEEEeCCHHHHHHHHHHHh
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFP-YIYPDPE-SRRLRAALAKDSGLESD---HILVGCGADELIDLIMRCV  166 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~-~~y~~~~-~~~lr~~la~~~~~~~~---~i~~~~G~~~al~~~~~~l  166 (422)
                      .+.++|+|+.|+|++++|+.+++++.+ +... ..++.+. ...+++.+++.+|++.+   +|++|+|+++++..+++++
T Consensus       695 ~g~~vI~LsinE~d~ppPp~V~eAi~eal~~~~~s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aL  774 (1082)
T PLN02672        695 QESSLIHMDVDESFLPVPSAVKASIFESFVRQNISESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCC  774 (1082)
T ss_pred             CCCCEEEEeCCCCCCCCCHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHH
Confidence            356899999999999999999999876 3221 2122222 45677777777787554   8999999999999999999


Q ss_pred             cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCC-CccCcCCCHHHHHHH
Q 014594          167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPN-NPDGSIINDEDLLKI  243 (422)
Q Consensus       167 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~-NPtG~~~~~e~l~~i  243 (422)
                      +++||.|+++.|+|+.|...++..|++++.+|.+  ++|.+|++.+++++++.+.++|+++||| ||||.+++.+++++|
T Consensus       775 l~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~L  854 (1082)
T PLN02672        775 VQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIEEI  854 (1082)
T ss_pred             cCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHH
Confidence            9999999999999999999999999999999964  4788999999999863345689999997 999999999999999


Q ss_pred             HcC----CCeEEEccCCccccCCCch------hhhh---hc---CCcEEEEccChhhhccccccceeeecCH-HHHHHHH
Q 014594          244 LEM----PILVVLDEAYTEFSGLESR------MEWV---KK---HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLW  306 (422)
Q Consensus       244 ~~~----~~~li~Deay~~~~~~~~~------~~~~---~~---~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~~l~  306 (422)
                      ++.    +++||+||+|.++.+++..      ....   ..   ..++++++||||.|+++|+|+||+++++ ++++.+.
T Consensus       855 lela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~  934 (1082)
T PLN02672        855 LSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFH  934 (1082)
T ss_pred             HHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHH
Confidence            864    8999999999987764321      1111   11   1379999999999999999999999964 5888887


Q ss_pred             HhcCC---CCCcHHHHHHHHHHcc--CChH---HH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC------
Q 014594          307 RAKQP---YNVSVAAEVAACAALQ--NPIY---LE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS------  371 (422)
Q Consensus       307 ~~~~~---~~~~~~~~~aa~~~L~--~~~~---~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~------  371 (422)
                      .....   ++.+..++.++.+++.  ++.|   +. .++.++++++++.+.|+++++....|.+++|+|++++.      
T Consensus       935 ~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~Gi~v~~PeGGFfLwl~l~~~l~~~~ 1014 (1082)
T PLN02672        935 SAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEACGWDVLEPQGGISMVAKPSAYLGKTV 1014 (1082)
T ss_pred             HhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHCCCeEecCCcEEEEEEEccccccccc
Confidence            65332   3333444444444443  3444   33 67779999999999999987543456678888987531      


Q ss_pred             -----------CCCHHHHHHHHHh-CCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          372 -----------GMDAKKLKDDLAK-MGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       372 -----------~~~~~~~~~~L~~-~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                                 +.++.++++.|++ .||.+.+|..++.++|+||+++.++  +++.+++++|
T Consensus      1015 ~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~~~--e~LeeALerL 1074 (1082)
T PLN02672       1015 KLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFALED--SEFDRALKAI 1074 (1082)
T ss_pred             cccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecCCH--HHHHHHHHHH
Confidence                       2467899999985 5999999977677899999999754  5677777765

>PLN02231 alanine transaminase

Probab=100.00  E-value=1.2e-40  Score=335.47  Aligned_cols=323  Identities=17%  Similarity=0.290  Sum_probs=247.0

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcCC-----CCCCCC-CcchHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQLK-----FPYIYP-DPESRRLRAALAKDS----G--LESDHILVGCGADELIDLIM  163 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~-----~~~~y~-~~~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al~~~~  163 (422)
                      ++|+|..+.+.|+. ..+.++...+.     ....|+ ..|..+||+++++++    |  +++++|++|+|+++++..++
T Consensus       130 ~~i~~~~~~~~fp~-~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~  208 (534)
T PLN02231        130 SLLDKSETHGLFSA-DAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMM  208 (534)
T ss_pred             ccCCCCCccccCCH-HHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHH
Confidence            56777665555653 33333332221     125584 458999999999986    3  57899999999999999999


Q ss_pred             HHhcC-CCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhc-----CCCeEEEEeCCCCccCcCC
Q 014594          164 RCVLD-PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGSII  235 (422)
Q Consensus       164 ~~l~~-~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPtG~~~  235 (422)
                      +.++. +||.|+++.|+|+.|...++..|++++.++++  ++|++|+++|++.+++     .++|+++++|||||||.++
T Consensus       209 ~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vl  288 (534)
T PLN02231        209 QLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVL  288 (534)
T ss_pred             HHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCC
Confidence            99884 79999999999999999999999999999965  3589999999998863     1689999999999999999


Q ss_pred             CHHHHHHHHcC----CCeEEEccCCccccCC-C-ch--hhhhh-------cCCcEEEEccChhhh-ccccccceeeec--
Q 014594          236 NDEDLLKILEM----PILVVLDEAYTEFSGL-E-SR--MEWVK-------KHDNLIVLRTFSKRA-GLAGLRVGYGAF--  297 (422)
Q Consensus       236 ~~e~l~~i~~~----~~~li~Deay~~~~~~-~-~~--~~~~~-------~~~~~i~~~S~SK~~-~~~G~r~G~i~~--  297 (422)
                      +.+++++|++.    +++||+||+|.++.++ + ..  ...+.       ...++++++||||.+ |++|+|+||+++  
T Consensus       289 s~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~  368 (534)
T PLN02231        289 AEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG  368 (534)
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEec
Confidence            99999999875    9999999999998873 2 11  11111       123689999999975 899999999986  


Q ss_pred             -CHHHHHHHHHhcCC-CCCcHHHHHHHHHHccCC-----hH------HH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCc
Q 014594          298 -PLSIIEYLWRAKQP-YNVSVAAEVAACAALQNP-----IY------LE-VKEALIKERERLFKLLKDVPFLNP-YPSYS  362 (422)
Q Consensus       298 -~~~~~~~l~~~~~~-~~~~~~~~~aa~~~L~~~-----~~------~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~  362 (422)
                       ++++++.+.+.... .+.+.+.|.++..+++.+     .+      .+ +++.++++++.+.+.|++++++.+ .|.++
T Consensus       369 ~~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~Gg  448 (534)
T PLN02231        369 FTSDVREQIYKVASVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKAEGA  448 (534)
T ss_pred             CCHHHHHHHHHHHhhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCee
Confidence             68899988766543 455778888888888642     22      22 467899999999999999855554 57788


Q ss_pred             eEEEEEe--CCC----------CCHHHHHHHHH-hCCcEEEeCCCCCC---CCeEEEEecChhhHHHHHHHHhhh
Q 014594          363 NFILCEV--TSG----------MDAKKLKDDLA-KMGVMIRHYNNKEL---KGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       363 ~f~~~~~--~~~----------~~~~~~~~~L~-~~gI~v~~~~~~~~---~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +|+|+++  |..          .+...++..|+ +.||.+.||..++.   ..++|+++..++  +++.+++++|
T Consensus       449 fylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~~~--e~l~eal~RL  521 (534)
T PLN02231        449 MYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQE--DKIPAIVSRL  521 (534)
T ss_pred             eEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeCCCH--HHHHHHHHHH
Confidence            9999554  421          12334556666 78999999988542   457999997654  6688888776

>PLN02368 alanine transaminase

Probab=100.00  E-value=2.9e-41  Score=330.42  Aligned_cols=302  Identities=17%  Similarity=0.268  Sum_probs=241.4

Q ss_pred             HHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCC--------C----------------------CCCHHHHHHH
Q 014594           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENP--------Y----------------------GPPPEVREAL  117 (422)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~--------~----------------------~~~~~v~~al  117 (422)
                      ++++.++..+ ....+...+.+....+.++|+|+.|+++        +                      .+++.+.+++
T Consensus        12 ~~~~~~~~~~-~~~~~~~~a~~~~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~   90 (407)
T PLN02368         12 NENVKKCQYA-VRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAK   90 (407)
T ss_pred             CHHHHhhhhh-cCCHHHHHHHHHHHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHH
Confidence            4555555554 2344566666666666789999999985        3                      1445555555


Q ss_pred             hcC---C-CCCCCCCc-chHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCchhHHH
Q 014594          118 GQL---K-FPYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEF  185 (422)
Q Consensus       118 ~~~---~-~~~~y~~~-~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~  185 (422)
                      ..+   . ....|++. |..+||+++++++    |  +++++|++|+|+++++..++.+++ ++||.|+++.|+|+.|..
T Consensus        91 ~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~  170 (407)
T PLN02368         91 HYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSA  170 (407)
T ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHH
Confidence            443   1 23568655 7899999999987    5  578899999999999999999887 799999999999999999


Q ss_pred             HHHHcCCEEEEecCC--CCCCCCHHHHHHHhhc-----CCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEcc
Q 014594          186 DAAVNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE  254 (422)
Q Consensus       186 ~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~De  254 (422)
                      .++..|++++.++.+  ++|++|++.+++.+++     .++|+++++|||||||.+++.+++++|++.    +++||+||
T Consensus       171 ~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE  250 (407)
T PLN02368        171 TISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDE  250 (407)
T ss_pred             HHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEc
Confidence            999999999999864  4589999999999863     168999999999999999999999999874    99999999


Q ss_pred             CCccccCCC--ch---hhhh---h----cCCcEEEEccChhhh-ccccccceeee---cCHHHHHHHHHhc-CCCCCcHH
Q 014594          255 AYTEFSGLE--SR---MEWV---K----KHDNLIVLRTFSKRA-GLAGLRVGYGA---FPLSIIEYLWRAK-QPYNVSVA  317 (422)
Q Consensus       255 ay~~~~~~~--~~---~~~~---~----~~~~~i~~~S~SK~~-~~~G~r~G~i~---~~~~~~~~l~~~~-~~~~~~~~  317 (422)
                      +|.++.+++  ..   ....   .    ..+++|+++||||.| +++|||+||++   +++++++.+.+.. ..++++.+
T Consensus       251 ~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~~~~~~~~~  330 (407)
T PLN02368        251 VYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVASIALSPNVS  330 (407)
T ss_pred             cccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhcccCCCCcH
Confidence            999988643  11   1111   1    245899999999998 89999999999   4889999988874 35788999


Q ss_pred             HHHHHHHHccCC--------hHH---H-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeC
Q 014594          318 AEVAACAALQNP--------IYL---E-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVT  370 (422)
Q Consensus       318 ~~~aa~~~L~~~--------~~~---~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~  370 (422)
                      +|.++.++|+++        .|.   + +++.++++|+.+.+.|++++++. ..|++++|+|++++
T Consensus       331 ~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~  396 (407)
T PLN02368        331 GQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIK  396 (407)
T ss_pred             HHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCC
Confidence            999999999753        233   2 57889999999999999986554 56888999997764

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=100.00  E-value=5.9e-41  Score=332.47  Aligned_cols=321  Identities=18%  Similarity=0.216  Sum_probs=243.9

Q ss_pred             CCeEEcCCCCCCCCCC--HHHHHHHhc-CC------CCCCCCCc-chHHHHHHHHHHc------CCCCCCEEEeCCHHHH
Q 014594           95 EDIVKIDANENPYGPP--PEVREALGQ-LK------FPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGADEL  158 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~--~~v~~al~~-~~------~~~~y~~~-~~~~lr~~la~~~------~~~~~~i~~~~G~~~a  158 (422)
                      .++|+|+.+.++..++  +.+.+++.+ +.      ....|+++ |..+||+++++++      ++++++|++|+|++++
T Consensus        30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~a  109 (416)
T PRK09440         30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSA  109 (416)
T ss_pred             CCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHH
Confidence            4679999988765443  345555544 21      12468765 7899999999997      4788999999999999


Q ss_pred             HHHHHHHhcC-----CCCEEEE-cCCCchhHHHHHHHcCC------EEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEe
Q 014594          159 IDLIMRCVLD-----PGDKIVD-CPPTFTMYEFDAAVNGA------AVVKVPRKS-DFSLNVELIADAVEREKPKCIFLT  225 (422)
Q Consensus       159 l~~~~~~l~~-----~gd~Vl~-~~p~y~~~~~~~~~~g~------~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~  225 (422)
                      +.++++++++     +||.|++ +.|+|+.|...+...|.      .++.++.+. ++++|+++++  +. .++++++++
T Consensus       110 l~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~-~~~~~i~l~  186 (416)
T PRK09440        110 FFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--ID-EDTGAICVS  186 (416)
T ss_pred             HHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cC-CCceEEEEe
Confidence            9999999985     5899999 79999999876654332      222232211 3689999997  33 678999999


Q ss_pred             CCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCchhhhh-hcCCcEEEEccChhhhccccccceeeecCHH
Q 014594          226 SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (422)
Q Consensus       226 ~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~  300 (422)
                      |||||||.+++.+++++|++.    +++||+||+|.++.......... ...+++|+++||||. +++|+|+||++++++
T Consensus       187 ~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i~~~~  265 (416)
T PRK09440        187 RPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKL-GLPGVRCGIVIADEE  265 (416)
T ss_pred             cCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCccccCCeEEEeccccc-CCCcceEEEEeCCHH
Confidence            999999999999999998764    99999999998653221111111 125789999999995 899999999999999


Q ss_pred             HHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-----HHHHHHHHHHHHHHHHccC-CC--Cc-ccCCCceEEEEEe
Q 014594          301 IIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-----VKEALIKERERLFKLLKDV-PF--LN-PYPSYSNFILCEV  369 (422)
Q Consensus       301 ~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-----~~~~~~~~~~~l~~~L~~~-~~--~~-~~p~~~~f~~~~~  369 (422)
                      +++.+......  ++++.+.|.++..+|++++|..     +++.++++++.+.+.|++. +.  .. ..|++|+|+|+++
T Consensus       266 l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~  345 (416)
T PRK09440        266 IIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWF  345 (416)
T ss_pred             HHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEEEEC
Confidence            99999877654  4678999999999999876643     4556778888888888653 21  23 3577899999999


Q ss_pred             CC-CCCHHHHHHHHHhCCcEEEeCCCC--C-------CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          370 TS-GMDAKKLKDDLAKMGVMIRHYNNK--E-------LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       370 ~~-~~~~~~~~~~L~~~gI~v~~~~~~--~-------~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ++ +.++.++.+.|.++||.++++..+  +       ..+++||+++..  .+++.+++++|
T Consensus       346 ~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~--~~~l~~~i~~l  405 (416)
T PRK09440        346 KDLPITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQD--DEEIEKGIAIL  405 (416)
T ss_pred             CCCCCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEecCC--HHHHHHHHHHH
Confidence            86 467889999999999999998653  1       135999999753  25566666655

>PTZ00376 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.4e-40  Score=328.08  Aligned_cols=313  Identities=18%  Similarity=0.213  Sum_probs=241.9

Q ss_pred             CCeEEcCCCCC-CCCCCH----HHHHHHhcC---CCCCCCC-CcchHHHHHHHHHHc---C---CCCCCEE--EeCCHHH
Q 014594           95 EDIVKIDANEN-PYGPPP----EVREALGQL---KFPYIYP-DPESRRLRAALAKDS---G---LESDHIL--VGCGADE  157 (422)
Q Consensus        95 ~~~i~l~~~~~-~~~~~~----~v~~al~~~---~~~~~y~-~~~~~~lr~~la~~~---~---~~~~~i~--~~~G~~~  157 (422)
                      .++++|+.|.+ ++.+++    .+.+++.+.   .....|+ ..|..+||+++++++   +   +++++|+  .|.|+++
T Consensus        29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~  108 (404)
T PTZ00376         29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTG  108 (404)
T ss_pred             cccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcch
Confidence            56799999985 344433    344454332   1226684 458999999999986   2   4778898  5899999


Q ss_pred             HHHHHHH---HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC-C-CCCCCCHHHHHHHhhc--CCCeEEEEeCCCCc
Q 014594          158 LIDLIMR---CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-K-SDFSLNVELIADAVER--EKPKCIFLTSPNNP  230 (422)
Q Consensus       158 al~~~~~---~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NP  230 (422)
                      ++..++.   .++++||+|++++|+|+.|...++..|++++.++. + +++++|++.+++.+.+  ++++++++++||||
T Consensus       109 al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NP  188 (404)
T PTZ00376        109 ALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNP  188 (404)
T ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence            9988875   56899999999999999999999999999999997 2 4589999999999853  34677778999999


Q ss_pred             cCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC---c--hhhh-hhcCCcEEEEccChhhhccccccceee---ec
Q 014594          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE---S--RMEW-VKKHDNLIVLRTFSKRAGLAGLRVGYG---AF  297 (422)
Q Consensus       231 tG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~---~--~~~~-~~~~~~~i~~~S~SK~~~~~G~r~G~i---~~  297 (422)
                      ||.+++.+++++|++.    ++++|+||+|.+|.+++   .  .... ....+++++++||||.|+++|+|+||+   ++
T Consensus       189 TG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~  268 (404)
T PTZ00376        189 TGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCA  268 (404)
T ss_pred             CCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeC
Confidence            9999999999998764    99999999999998753   1  1222 223468999999999999999999998   57


Q ss_pred             CHHHHHHH----HHh-cCCC-CCcHHHHHHHHHHccCCh----H---HH-HHHHHHHHHHHHHHHHccCCC---C-cccC
Q 014594          298 PLSIIEYL----WRA-KQPY-NVSVAAEVAACAALQNPI----Y---LE-VKEALIKERERLFKLLKDVPF---L-NPYP  359 (422)
Q Consensus       298 ~~~~~~~l----~~~-~~~~-~~~~~~~~aa~~~L~~~~----~---~~-~~~~~~~~~~~l~~~L~~~~~---~-~~~p  359 (422)
                      ++++++.+    .+. ...+ +.+.+.|.++..+|++++    |   ++ .+++++++|+.+.+.|++++.   . ...|
T Consensus       269 ~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p  348 (404)
T PTZ00376        269 NKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIIN  348 (404)
T ss_pred             CHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccc
Confidence            88765544    332 2334 457889999999998853    3   23 567889999999999998742   2 2357


Q ss_pred             CCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014594          360 SYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH  420 (422)
Q Consensus       360 ~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~  420 (422)
                      .+|+|+|++++     .+++++|. ++||.+.++.        ||+++  ..++++.+.++|+.
T Consensus       349 ~gg~f~~~~~~-----~~~~~~L~~~~~v~v~p~~--------Ris~~~~~~~~~~~~~~~l~~  399 (404)
T PTZ00376        349 QIGMFSFTGLT-----KEQVERLIEKYHIYLLDNG--------RISVAGLTSKNVDYVAEAIHD  399 (404)
T ss_pred             CceEEEecCCC-----HHHHHHHHHhCCEeecCCC--------eEEEeccCHHhHHHHHHHHHH
Confidence            88999999873     47788888 5599998872        99998  66666666666654

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=100.00  E-value=4.2e-40  Score=324.09  Aligned_cols=314  Identities=19%  Similarity=0.195  Sum_probs=239.4

Q ss_pred             CCeEEcCCCC---CCCCCC--HHHHHHHhcCC---CCCCCC-CcchHHHHHHHHHHc---C---CCCCCE--EEeCCHHH
Q 014594           95 EDIVKIDANE---NPYGPP--PEVREALGQLK---FPYIYP-DPESRRLRAALAKDS---G---LESDHI--LVGCGADE  157 (422)
Q Consensus        95 ~~~i~l~~~~---~~~~~~--~~v~~al~~~~---~~~~y~-~~~~~~lr~~la~~~---~---~~~~~i--~~~~G~~~  157 (422)
                      .++|+|+.|.   +++..+  +.+.+++.+..   ....|+ ..|..+||+++++++   +   +++++|  ++|+|+++
T Consensus        26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~  105 (396)
T PRK09257         26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTG  105 (396)
T ss_pred             cCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccH
Confidence            4679999995   333333  67888877632   224684 458999999999996   2   367887  99999999


Q ss_pred             HHHHHHHHh--cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCcc
Q 014594          158 LIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNNPD  231 (422)
Q Consensus       158 al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPt  231 (422)
                      ++.++++.+  ++|||+|++++|+|+.|...++..|++++.++.  ++++++|++.+++.+.+  .+++++++++|||||
T Consensus       106 al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPT  185 (396)
T PRK09257        106 ALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPT  185 (396)
T ss_pred             HHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCC
Confidence            999998766  589999999999999999999999999999996  35689999999998863  234566668999999


Q ss_pred             CcCCCHHHHHHHHcC----CCeEEEccCCccccCC-Cc---hhhhh-hcCCcEEEEccChhhhccccccceeeec---CH
Q 014594          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGL-ES---RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAF---PL  299 (422)
Q Consensus       232 G~~~~~e~l~~i~~~----~~~li~Deay~~~~~~-~~---~~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~---~~  299 (422)
                      |.+++.+++++|++.    ++++|+||+|.+|.++ ..   ....+ ...+++++++||||.|+++|+|+||+++   ++
T Consensus       186 G~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~  265 (396)
T PRK09257        186 GADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDA  265 (396)
T ss_pred             CCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCH
Confidence            999999999999874    8999999999998864 11   11222 2356899999999999999999999973   44


Q ss_pred             HH----HHHHHHhc-CC-CCCcHHHHHHHHHHccCC-------hHHH-HHHHHHHHHHHHHHHHccCCC---Cc-ccCCC
Q 014594          300 SI----IEYLWRAK-QP-YNVSVAAEVAACAALQNP-------IYLE-VKEALIKERERLFKLLKDVPF---LN-PYPSY  361 (422)
Q Consensus       300 ~~----~~~l~~~~-~~-~~~~~~~~~aa~~~L~~~-------~~~~-~~~~~~~~~~~l~~~L~~~~~---~~-~~p~~  361 (422)
                      +.    ++.+.... .. ++++.+.|.++..+|+++       ++++ +++.++++++.+.+.|++++.   .. ..|.+
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~g  345 (396)
T PRK09257        266 EEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQR  345 (396)
T ss_pred             HHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccc
Confidence            43    33343332 23 456889999999999875       2344 788999999999999998741   33 35789


Q ss_pred             ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          362 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       362 ~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      |+|+|++++    .+.+.+.+.++||.+.+.      +  ||+++... .+.+.+++++|
T Consensus       346 g~~~w~~l~----~~~~~~l~~~~~V~~~p~------~--ri~~~~~~-~~~i~~~~~~i  392 (396)
T PRK09257        346 GMFSYSGLT----PEQVDRLREEFGVYAVGS------G--RINVAGLN-ESNIDYVAEAI  392 (396)
T ss_pred             eEEEecCCC----HHHHHHHHHcCCEEEcCC------C--eEEEeeCC-HHHHHHHHHHH
Confidence            999999884    344444445889998773      2  99997422 25566666655

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=100.00  E-value=4.2e-40  Score=326.93  Aligned_cols=321  Identities=19%  Similarity=0.250  Sum_probs=236.4

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCc-chHHHHHHHH-HHc----C---CCCC--CEEEeCCHHHHHHHHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPDP-ESRRLRAALA-KDS----G---LESD--HILVGCGADELIDLIMR  164 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~-~~~~lr~~la-~~~----~---~~~~--~i~~~~G~~~al~~~~~  164 (422)
                      ++|+++.+++.+++++.+.+...... +..||.+ +..+++++++ +++    +   .+++  +|++|+|+++++..++.
T Consensus        95 ~~i~l~~g~p~~~~~~~~~~~~~~~~-~~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~  173 (521)
T TIGR03801        95 DIISYVIDQLGFDPDAFLYEMCDGII-GDNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFD  173 (521)
T ss_pred             HHHhhcCCCCCCCCCHHHHHHHHHhh-cCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHH
Confidence            46899999999987655544333332 2457544 5666666666 443    1   2333  89999999999999988


Q ss_pred             H-----hcCCCCEEEEcCCCchhHHHHHHHc--CCEEEEecCC--CC-----CCCCHHHHHHHhhcCCCeEEEEeCCCCc
Q 014594          165 C-----VLDPGDKIVDCPPTFTMYEFDAAVN--GAAVVKVPRK--SD-----FSLNVELIADAVEREKPKCIFLTSPNNP  230 (422)
Q Consensus       165 ~-----l~~~gd~Vl~~~p~y~~~~~~~~~~--g~~~~~v~~~--~~-----~~~d~~~l~~~i~~~~~~~i~l~~p~NP  230 (422)
                      +     +++|||+|+++.|+|+.|...++..  |++++.++.+  .+     |.+|+++++++++ +++|+|+++|||||
T Consensus       174 ~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~-~~~kai~l~nP~NP  252 (521)
T TIGR03801       174 SLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD-PSIKALFVVNPSNP  252 (521)
T ss_pred             HHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcC-CCCcEEEEeCCCCC
Confidence            7     7899999999999999999887775  7788888753  22     8899999999876 79999999999999


Q ss_pred             cCcCCCHHHHHHHHcC------CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHH----
Q 014594          231 DGSIINDEDLLKILEM------PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS----  300 (422)
Q Consensus       231 tG~~~~~e~l~~i~~~------~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~----  300 (422)
                      ||.+++.+++++|++.      +++||+||+|.+|.+....+... ..+++++++||||.||++|||+||++++++    
T Consensus       253 TG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~-~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~~v~d  331 (521)
T TIGR03801       253 PSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAE-LPYNTIGVYSFSKYFGATGWRLGTIALHKDNIFD  331 (521)
T ss_pred             CCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhh-CCCCEEEEEcchhhccCchhhhhhhhcCchHHHH
Confidence            9999999999888542      79999999999987532222111 346899999999999999999999999865    


Q ss_pred             -HHH--------HH------------------------HHhc--CCCCCcHHHHH-----HHHHHccC-ChHHH-HHHHH
Q 014594          301 -IIE--------YL------------------------WRAK--QPYNVSVAAEV-----AACAALQN-PIYLE-VKEAL  338 (422)
Q Consensus       301 -~~~--------~l------------------------~~~~--~~~~~~~~~~~-----aa~~~L~~-~~~~~-~~~~~  338 (422)
                       +++        .+                        ++..  ...+++.+.|.     ++.++++. ..|.+ +++.+
T Consensus       332 ~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~~~y~~~~~~~~  411 (521)
T TIGR03801       332 KLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKENAYKAETKDIC  411 (521)
T ss_pred             HHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence             221        11                        1111  12455666665     34455554 46777 88999


Q ss_pred             HHHHHHHHHHHccCCCCcccCCCceEEEEEeCC-C---------------CCHHHHHHHHH-hCCcEEEeCCCCCC-CCe
Q 014594          339 IKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-G---------------MDAKKLKDDLA-KMGVMIRHYNNKEL-KGY  400 (422)
Q Consensus       339 ~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~-~---------------~~~~~~~~~L~-~~gI~v~~~~~~~~-~~~  400 (422)
                      +++++.+.+.| .++.....|.+++|+|++++. .               .+..+++..|. +.||.+.||..++. +++
T Consensus       412 ~~R~~~l~~~L-g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~  490 (521)
T TIGR03801       412 RRREKLLFRGL-GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGPEWS  490 (521)
T ss_pred             HHHHHHHHHhc-CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCCCCe
Confidence            99999999999 333222346778999999973 1               15677888887 78999999988543 568


Q ss_pred             EEEEecChhhHHHHHHHHhhh
Q 014594          401 VRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       401 iRis~~~~~~~~~l~~al~~l  421 (422)
                      +|||++...+ +.+.++.++|
T Consensus       491 vRisla~l~~-~~~~~~~~rl  510 (521)
T TIGR03801       491 VRVSLANLNE-YDYAEIGRAI  510 (521)
T ss_pred             EEEEecCCCH-HHHHHHHHHH
Confidence            9999985332 4455555554

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>PLN02397 aspartate transaminase

Probab=100.00  E-value=2.3e-39  Score=320.36  Aligned_cols=313  Identities=17%  Similarity=0.231  Sum_probs=227.6

Q ss_pred             CCCeEEcCCCC-CCCCCC----HHHHHHHhcC-C--CCCCC-CCcchHHHHHHHHHHc-CCC-----CCCE-----EEeC
Q 014594           94 PEDIVKIDANE-NPYGPP----PEVREALGQL-K--FPYIY-PDPESRRLRAALAKDS-GLE-----SDHI-----LVGC  153 (422)
Q Consensus        94 ~~~~i~l~~~~-~~~~~~----~~v~~al~~~-~--~~~~y-~~~~~~~lr~~la~~~-~~~-----~~~i-----~~~~  153 (422)
                      ....++++.+. ++...+    +.+.++...+ .  ....| |..|..+||+++++++ +..     +++|     +.++
T Consensus        47 ~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~  126 (423)
T PLN02397         47 SPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGT  126 (423)
T ss_pred             CcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccch
Confidence            34568888875 333233    3455554332 2  22468 4558999999999987 221     2233     3344


Q ss_pred             CHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhc--CCCeEEEEeCCCC
Q 014594          154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNN  229 (422)
Q Consensus       154 G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~N  229 (422)
                      |+.+ +...+..++.|||+|++++|+|+.|...++..|++++.++.  ++++++|++.+++.+.+  .+++++++++|||
T Consensus       127 Ga~~-l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~N  205 (423)
T PLN02397        127 GSLR-LGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHN  205 (423)
T ss_pred             HHHH-HHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence            4443 33333345579999999999999999999999999999986  34589999999888752  4678888899999


Q ss_pred             ccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC---c--hhhhh-hcCCcEEEEccChhhhccccccceeee--c
Q 014594          230 PDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE---S--RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGA--F  297 (422)
Q Consensus       230 PtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~---~--~~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~--~  297 (422)
                      |||.+++.+++++|++.    ++++|+||+|.+|.+++   .  ..... ...+++|+++||||.|+++|||+||++  +
T Consensus       206 PTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~  285 (423)
T PLN02397        206 PTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVC  285 (423)
T ss_pred             CCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEe
Confidence            99999999999998864    99999999999998743   1  22222 234579999999999999999999985  3


Q ss_pred             -CHHHHH----HHHHhcCC--CCCcHHHHHHHHHHccCC----hH---HH-HHHHHHHHHHHHHHHHccCC----CCccc
Q 014594          298 -PLSIIE----YLWRAKQP--YNVSVAAEVAACAALQNP----IY---LE-VKEALIKERERLFKLLKDVP----FLNPY  358 (422)
Q Consensus       298 -~~~~~~----~l~~~~~~--~~~~~~~~~aa~~~L~~~----~~---~~-~~~~~~~~~~~l~~~L~~~~----~~~~~  358 (422)
                       ++++++    .+......  ++++.+.|.++..+|+++    .|   ++ +++.++++|+.+.+.|++++    +..+.
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~  365 (423)
T PLN02397        286 KSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHIT  365 (423)
T ss_pred             CCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccc
Confidence             566554    33343332  457788999999999875    33   44 77899999999999999986    33456


Q ss_pred             CCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          359 PSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       359 p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      |++|+|+|++++     +++++.|+ ++||.+.++      +  ||+++..+ .+.+.+++++|
T Consensus       366 p~gg~fl~~~l~-----~~~~~~Ll~~~~V~v~~~------~--Ri~~~~~~-~~~i~~~~~~i  415 (423)
T PLN02397        366 KQIGMFSFTGLN-----KEQVDRMTKEYHIYMTRD------G--RISMAGLS-SKNVPYLADAI  415 (423)
T ss_pred             CCceEEEecCCC-----HHHHHHHHHhCCEEECCC------C--eEEEeeCC-HHHHHHHHHHH
Confidence            899999999883     45888886 789999732      2  99997322 14455555554

>PRK08637 hypothetical protein; Provisional

Probab=100.00  E-value=4.5e-39  Score=315.81  Aligned_cols=305  Identities=21%  Similarity=0.276  Sum_probs=234.8

Q ss_pred             HHHHHHHhcC--CCCCCCCC-cchHHHHHHHHHHc-----CCCC---CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 014594          111 PEVREALGQL--KFPYIYPD-PESRRLRAALAKDS-----GLES---DHILVGCGADELIDLIMRCVLDPGDKIVDCPPT  179 (422)
Q Consensus       111 ~~v~~al~~~--~~~~~y~~-~~~~~lr~~la~~~-----~~~~---~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~  179 (422)
                      +.+.+++.+.  .....|++ .|..+||+++++++     ...+   ++|++|+|+++++.+++.+++++||.|++++|+
T Consensus        23 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~  102 (388)
T PRK08637         23 SSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHN  102 (388)
T ss_pred             HHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCC
Confidence            4455555542  23367855 48899999999876     2332   578999999999999999999999999999999


Q ss_pred             chhHHHHHH-HcCCEEEEecCC-CCCCCCHHHHHHHhh---cCCCeEEEEeCCCCccCcCCCHHHHHHHHc---------
Q 014594          180 FTMYEFDAA-VNGAAVVKVPRK-SDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDEDLLKILE---------  245 (422)
Q Consensus       180 y~~~~~~~~-~~g~~~~~v~~~-~~~~~d~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~---------  245 (422)
                      |+.|...+. ..|++++.++.. +++++|++++++.++   ++..++++++|||||||.+++.+++++|++         
T Consensus       103 y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~  182 (388)
T PRK08637        103 WGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAG  182 (388)
T ss_pred             CccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence            999988654 589999999973 556899999999875   234556777899999999999999999875         


Q ss_pred             CCCeEEEccCCccccCCCch----hhh-hhcCCcE--EEEccChhhhccccccceeeecC------HHHHHHHHHh----
Q 014594          246 MPILVVLDEAYTEFSGLESR----MEW-VKKHDNL--IVLRTFSKRAGLAGLRVGYGAFP------LSIIEYLWRA----  308 (422)
Q Consensus       246 ~~~~li~Deay~~~~~~~~~----~~~-~~~~~~~--i~~~S~SK~~~~~G~r~G~i~~~------~~~~~~l~~~----  308 (422)
                      .+++||+||+|.+|.+++..    ... .+..+++  ++++||||.|+++|+|+||++++      +++++.+.+.    
T Consensus       183 ~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~  262 (388)
T PRK08637        183 TKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGL  262 (388)
T ss_pred             CcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHH
Confidence            38999999999999765421    112 2344575  45579999999999999999854      6777777542    


Q ss_pred             -c-CCCCCcHHHHHHHHHHccCChHHH----HHHHHHHHHHHHHHHHccCC---CCc-ccCCCceEEEEEeCCCCCHHHH
Q 014594          309 -K-QPYNVSVAAEVAACAALQNPIYLE----VKEALIKERERLFKLLKDVP---FLN-PYPSYSNFILCEVTSGMDAKKL  378 (422)
Q Consensus       309 -~-~~~~~~~~~~~aa~~~L~~~~~~~----~~~~~~~~~~~l~~~L~~~~---~~~-~~p~~~~f~~~~~~~~~~~~~~  378 (422)
                       . ..+++|.+.|.++..+|+++.|..    .+..++++++.+.+.|++.+   .+. ..|++|+|+|++++ +.+++++
T Consensus       263 ~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~-~~~~~~l  341 (388)
T PRK08637        263 IRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLK-GVDAEEL  341 (388)
T ss_pred             hhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCC-hHHHHHH
Confidence             1 235789999999999999877654    44568888888888887652   233 34567899999997 4567889


Q ss_pred             HHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          379 KDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       379 ~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .+.|. ++||.+.+..    ++++||+++... .+++.+++++|
T Consensus       342 ~~~l~~~~gv~~~~~~----~~~iRi~~~~~~-~~~i~~~~~~l  380 (388)
T PRK08637        342 RVHLLEKYGIGTIALN----ETDLRIAFSCVE-EEDIPELFDSI  380 (388)
T ss_pred             HHHHhhhcceEEEecc----CCceEEEeecCC-HHHHHHHHHHH
Confidence            99986 7899988542    679999998744 36677777765

>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-38  Score=290.89  Aligned_cols=298  Identities=20%  Similarity=0.282  Sum_probs=247.7

Q ss_pred             CCCCCc-chHHHHHHHHHHc--------CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH-cCCE
Q 014594          124 YIYPDP-ESRRLRAALAKDS--------GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAA  193 (422)
Q Consensus       124 ~~y~~~-~~~~lr~~la~~~--------~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~  193 (422)
                      ..|++. |..++|+++|+++        ..+|+++++++|++.+++.++.+|++|||.-+++.|.|+++..-++. .|++
T Consensus       115 a~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgve  194 (471)
T KOG0256|consen  115 AMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVE  194 (471)
T ss_pred             hhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCce
Confidence            346555 8899999999997        25899999999999999999999999999999999999999877765 7999


Q ss_pred             EEEecC--CCCCCCCHHHHHHHhhc-----CCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCC
Q 014594          194 VVKVPR--KSDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGL  262 (422)
Q Consensus       194 ~~~v~~--~~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~  262 (422)
                      +++|..  .++|.++.+++|+++.+     .++|.++++||+||.|.++++|++..++++    ++.+|+||+|+.-+++
T Consensus       195 ivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~  274 (471)
T KOG0256|consen  195 IVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFD  274 (471)
T ss_pred             EEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccC
Confidence            999884  57789999999998854     478999999999999999999999999986    9999999999986655


Q ss_pred             Cch----hhh---hh-cCCcEEEEccChhhhccccccceeeec-CHHHHHHHHHhcCCCCCcHHHHHHHHHHccCChHH-
Q 014594          263 ESR----MEW---VK-KHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYL-  332 (422)
Q Consensus       263 ~~~----~~~---~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~-  332 (422)
                      .+.    +..   .. ..+++.++.|+||.+|+||+|+|.+.. +++++....+....+.+|+..|..+...|.|.+|. 
T Consensus       275 ~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~~vSs~tQ~~la~LLSD~~f~~  354 (471)
T KOG0256|consen  275 KSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGLVSSQTQYLLASLLSDEEFTR  354 (471)
T ss_pred             ccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhccCCcHHHHHHHHHHhchHHHHH
Confidence            421    111   11 457889999999999999999999997 56778888888888889999999999999996544 


Q ss_pred             ---H-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCC------CHHHHHHHHHhC-CcEEEeCCC--CCCCC
Q 014594          333 ---E-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGM------DAKKLKDDLAKM-GVMIRHYNN--KELKG  399 (422)
Q Consensus       333 ---~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~------~~~~~~~~L~~~-gI~v~~~~~--~~~~~  399 (422)
                         . ..++++.+.+++.+.|++++.-......|.|+|+++..-.      ..-++.+.+.++ ++.+.||..  ...+|
T Consensus       355 ~yl~en~~Rl~~rh~~~~~gLk~lgI~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpG  434 (471)
T KOG0256|consen  355 EYLRENNKRLRIRHRYIVEGLKALGIPCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHEPG  434 (471)
T ss_pred             HHHHHHHHHHHHHHHHHHhhHHhcCCceeecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceecCCC
Confidence               4 7789999999999999998754456678899999986311      234667777755 999999998  45689


Q ss_pred             eEEEEecChhhHHHHHHHHhhhC
Q 014594          400 YVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       400 ~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      |+|++|+...+ +.+.-|++|++
T Consensus       435 WFRvcFAn~~~-~t~~~am~Ri~  456 (471)
T KOG0256|consen  435 WFRVCFANMSE-ETLEVAMRRLK  456 (471)
T ss_pred             eEEEEeccCCH-HHHHHHHHHHH
Confidence            99999997653 44554888763

>cd00609 AAT_like Aspartate aminotransferase family

Probab=100.00  E-value=9.2e-34  Score=274.27  Aligned_cols=321  Identities=35%  Similarity=0.517  Sum_probs=259.5

Q ss_pred             EEcCCCCCCCCCCHHHHHHHhc--C-CCCCCC-CCcchHHHHHHHHHHcCCC------CCCEEEeCCHHHHHHHHHHHhc
Q 014594           98 VKIDANENPYGPPPEVREALGQ--L-KFPYIY-PDPESRRLRAALAKDSGLE------SDHILVGCGADELIDLIMRCVL  167 (422)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~--~-~~~~~y-~~~~~~~lr~~la~~~~~~------~~~i~~~~G~~~al~~~~~~l~  167 (422)
                      ++|+.|.+++.+++.+.+++.+  . .....| +..+..+++++++++++..      ++++++++|+++++..++.++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~   80 (350)
T cd00609           1 IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL   80 (350)
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC
Confidence            4788999999998888877653  2 222445 4457899999999998644      6789999999999999999999


Q ss_pred             CCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCH--HHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH---
Q 014594          168 DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV--ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK---  242 (422)
Q Consensus       168 ~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~--~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~---  242 (422)
                      ++||+|+++.|+|..+...++..|.+++.++.+++...+.  +.++.... +++++|++++|+||||.+++.+++.+   
T Consensus        81 ~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~v~i~~~~~~tG~~~~~~~l~~l~~  159 (350)
T cd00609          81 NPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKT-PKTKLLYLNNPNNPTGAVLSEEELEELAE  159 (350)
T ss_pred             CCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcC-ccceEEEEECCCCCCCcccCHHHHHHHHH
Confidence            9999999999999999999999999999999766656654  56666554 78999999999999999999999985   


Q ss_pred             HHcC-CCeEEEccCCccccCCCchh---hhhhcCCcEEEEccChhhhccccccceeeecCH-HHHHHHHHhcCC--CCCc
Q 014594          243 ILEM-PILVVLDEAYTEFSGLESRM---EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQP--YNVS  315 (422)
Q Consensus       243 i~~~-~~~li~Deay~~~~~~~~~~---~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~~l~~~~~~--~~~~  315 (422)
                      +++. |+++|+|++|..+...+...   ......+.+++++|++|.++++|.|+||+++++ ++.+.+......  ++.+
T Consensus       160 ~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~  239 (350)
T cd00609         160 LAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTSGPS  239 (350)
T ss_pred             HHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHHhcccCCC
Confidence            5544 99999999999876543322   233456778999999999988999999999998 788888776655  6788


Q ss_pred             HHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeC
Q 014594          316 VAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHY  392 (422)
Q Consensus       316 ~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~  392 (422)
                      ...+.++..+|+.. ++.+ .+++++++++++.+.|+++++.. ..+..++|+|++++...+.+.+.+.|.++||.+.++
T Consensus       240 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~  319 (350)
T cd00609         240 TLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPG  319 (350)
T ss_pred             hHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCCChHHHHHHHHHhCCEEEecc
Confidence            89999999999886 5666 88899999999999999987655 467788999999975545666777777889999987


Q ss_pred             CCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          393 NNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       393 ~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ..+.  .+.++||+++..  .+++..+++.|
T Consensus       320 ~~~~~~~~~~iRi~~~~~--~~~i~~~~~al  348 (350)
T cd00609         320 SAFGEGGEGFVRLSFATP--EEELEEALERL  348 (350)
T ss_pred             cccccCCCCeEEEEeeCC--HHHHHHHHHHh
Confidence            6543  678999999885  24455555544

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=100.00  E-value=4.1e-32  Score=260.80  Aligned_cols=293  Identities=16%  Similarity=0.188  Sum_probs=222.3

Q ss_pred             CCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEc---CCCchh
Q 014594          107 YGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDC---PPTFTM  182 (422)
Q Consensus       107 ~~~~~~v~~al~~~-~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~---~p~y~~  182 (422)
                      +..+|.+.++..+. .. ++-+..-..+|++++|+++|++++++++++|+++++..++.+++++||.|+++   .|+|..
T Consensus        32 l~~~~~~~~~~~~~~~~-~~g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s  110 (346)
T TIGR03576        32 LAGGFKIDEEDLELLET-YVGPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPS  110 (346)
T ss_pred             CCCChhHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchh
Confidence            34567777776552 11 11011236789999999999999999999999999999999999999999874   579999


Q ss_pred             HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCcc
Q 014594          183 YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTE  258 (422)
Q Consensus       183 ~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~  258 (422)
                      |...++..|++++.+       .|++.++. .  +++++|+++ ++||+|.+++.+++.+|++.    ++++|+||+|..
T Consensus       111 ~~~~~~l~ga~~~~~-------~~l~~l~~-~--~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~  179 (346)
T TIGR03576       111 IPRSCKLAGAEYFES-------DELSELKK-I--DGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGA  179 (346)
T ss_pred             HHHHHHHcCCEEecc-------CCHHHHhh-C--cCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccc
Confidence            999999999987543       24555432 2  467888875 46999999888888777653    999999999998


Q ss_pred             ccCC---CchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCC--CcHHHHHHHHHHccCChHHH
Q 014594          259 FSGL---ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN--VSVAAEVAACAALQNPIYLE  333 (422)
Q Consensus       259 ~~~~---~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~--~~~~~~~aa~~~L~~~~~~~  333 (422)
                      +..+   .....   ..+..+++.||||  +++|+|+||+++++++++.+.+...++.  .+++.+.++.++|+......
T Consensus       180 ~~~~~~~~~~~~---~~~~divv~s~SK--alaG~r~G~v~~~~~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~~~~  254 (346)
T TIGR03576       180 RVRRLYGQPPAL---DLGADLVVTSTDK--LMDGPRGGLLAGRKELVDKIKSVGEQFGLEAQAPLLAAVVRALEEFELSR  254 (346)
T ss_pred             cccccCCCCCHH---HcCCcEEEeccch--hccccceEEEEeCHHHHHHHHHhhcCcccCccHHHHHHHHHHHhhccHHH
Confidence            6522   11111   1123477889999  5789999999999999999998887754  68889999999997643222


Q ss_pred             HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCH-HHHHHHHHhCCcEEEeCCCC-CCCCeEEEEecChh--
Q 014594          334 VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDA-KKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVGKPE--  409 (422)
Q Consensus       334 ~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~-~~~~~~L~~~gI~v~~~~~~-~~~~~iRis~~~~~--  409 (422)
                      +++.++++++.+.+.++++   .+.++.++|+|++++. .++ +.+.+.|.++||.++++..+ +.++|+||++++++  
T Consensus       255 ~~~~l~~r~~~~~~~l~~~---~~~~~~~~f~~~~~~~-~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~~~~  330 (346)
T TIGR03576       255 IRDAFKRKEEVYLRLFDKL---NVERTPTGFVIKGVEE-EKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAAKDAE  330 (346)
T ss_pred             HHHHHHHHHHHHHHHHHhC---CCCcCCCeEEEEeCCC-CCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEecChHH
Confidence            7778888888888888754   3456778899999963 233 44445556899999998764 45789999999888  


Q ss_pred             --hHHHHHHHHhh
Q 014594          410 --HTDALMECLMH  420 (422)
Q Consensus       410 --~~~~l~~al~~  420 (422)
                        +++.+.++++.
T Consensus       331 ~~~~~~~~~al~~  343 (346)
T TIGR03576       331 RIGDDYLVEAVKD  343 (346)
T ss_pred             hcCHHHHHHHHHh
Confidence              58999998875

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=100.00  E-value=5.8e-32  Score=263.08  Aligned_cols=317  Identities=21%  Similarity=0.221  Sum_probs=238.4

Q ss_pred             CCCCeEEcCCCCCCCC--CCHHHHHHHhc-CC-CCCC-------CCC-cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594           93 KPEDIVKIDANENPYG--PPPEVREALGQ-LK-FPYI-------YPD-PESRRLRAALAKDSGLESDHILVGCGADELID  160 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~--~~~~v~~al~~-~~-~~~~-------y~~-~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~  160 (422)
                      .+.++|||+.| ++++  .+|++++++.+ +. ++..       ++. +...+++++++++++. +++|++++|+++.+ 
T Consensus        14 ~g~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-~~~i~~~~G~~~~~-   90 (360)
T TIGR00858        14 DGRRLLNFSSN-DYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGT-EAALLFSSGYLANV-   90 (360)
T ss_pred             CCceEEecccC-CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-CCEEEECchHHHHH-
Confidence            46779999998 4554  55889888876 22 1111       122 2356799999999984 57888888865555 


Q ss_pred             HHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---CCCeEEEEeCCCCccCcCCCH
Q 014594          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIIND  237 (422)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~  237 (422)
                      .++.+++++||+|+++.|+|..+...++..|++++.++     .+|++.+++.+++   .++++|++++++||||...+.
T Consensus        91 ~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~-----~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~  165 (360)
T TIGR00858        91 GVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYR-----HNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPL  165 (360)
T ss_pred             HHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEec-----CCCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCH
Confidence            56677889999999999999999888888999998877     3688999998864   257888888999999999999


Q ss_pred             HHHHHHHcC-CCeEEEccCCccccCCCc---hhhh--hhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC
Q 014594          238 EDLLKILEM-PILVVLDEAYTEFSGLES---RMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (422)
Q Consensus       238 e~l~~i~~~-~~~li~Deay~~~~~~~~---~~~~--~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~  311 (422)
                      ++|.++++. |+++|+||+|..+..+..   ....  +...+++++++||||.++++|   ||+++++++++.+......
T Consensus       166 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~~~~~~~~~~~~~~  242 (360)
T TIGR00858       166 PQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGSQALIDYLINRART  242 (360)
T ss_pred             HHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcCHHHHHHHHHhCcc
Confidence            999999997 999999999987543221   1222  123467899999999998766   9999999999888655443


Q ss_pred             C----CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCC
Q 014594          312 Y----NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMG  386 (422)
Q Consensus       312 ~----~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~g  386 (422)
                      +    +.++..+.++.++++.....+ .+++++++++++.+.|++++ +.+.++.++|+|+.++...++.++.+.|+++|
T Consensus       243 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  321 (360)
T TIGR00858       243 LIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEALG-FTLMPSCTPIVPVIIGDNASALALAEELQQQG  321 (360)
T ss_pred             ceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC-CccCCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence            2    345555666667775433334 78899999999999999886 44557788999999875456788999999999


Q ss_pred             cEEEeCCCC---CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          387 VMIRHYNNK---ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       387 I~v~~~~~~---~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      |.+.++..+   ...+++||+++...+.+++.+++++|
T Consensus       322 I~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l  359 (360)
T TIGR00858       322 IFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEAL  359 (360)
T ss_pred             eeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhh
Confidence            999875442   23569999998422235566666554

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>PRK10534 L-threonine aldolase; Provisional

Probab=100.00  E-value=5.7e-33  Score=267.40  Aligned_cols=305  Identities=16%  Similarity=0.156  Sum_probs=224.3

Q ss_pred             eEEcCCCCCCCCCCHHHHHHHhcC-CCCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 014594           97 IVKIDANENPYGPPPEVREALGQL-KFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV  174 (422)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl  174 (422)
                      +|||++|+||. ++|.+++++.+. .....| |++...+|++++++++|+++  +++++|+++++.+++.+++++||+|+
T Consensus         1 ~~~~~~~~~~~-p~~~~~~a~~~~~~~~~~Y~~~~~~~~L~~~la~~~g~~~--~~v~~~g~~a~~~~l~~~~~~gd~vi   77 (333)
T PRK10534          1 MIDLRSDTVTR-PSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEA--ALFLPTGTQANLVALLSHCERGEEYI   77 (333)
T ss_pred             CcccccccCCC-CCHHHHHHHHhccCCCcccCCCHHHHHHHHHHHHHhCCCe--EEEeCchHHHHHHHHHHhcCCCCeeE
Confidence            37999999999 889999998763 333567 88899999999999999754  45777778788777788899999999


Q ss_pred             EcCCCchh-HHHH-HHHcC-CEEEEecCCCCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCCHHHHHHHHc-
Q 014594          175 DCPPTFTM-YEFD-AAVNG-AAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILE-  245 (422)
Q Consensus       175 ~~~p~y~~-~~~~-~~~~g-~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~e~l~~i~~-  245 (422)
                      ++.|+|.. |... +...| ++++.++.+.++.+|++++++++++.     ++++|++|||+  ||.+++.+++.+|++ 
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~  155 (333)
T PRK10534         78 VGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEF  155 (333)
T ss_pred             EechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHH
Confidence            99888853 4321 23333 78888887777899999999998632     68999999876  599999999988765 


Q ss_pred             --C-CCeEEEccCCccccC--CCchhhhhhcCCcEEEEccChhhhccccccce-eeecCHHHHHHHHHhcCCCC----Cc
Q 014594          246 --M-PILVVLDEAYTEFSG--LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEYLWRAKQPYN----VS  315 (422)
Q Consensus       246 --~-~~~li~Deay~~~~~--~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G-~i~~~~~~~~~l~~~~~~~~----~~  315 (422)
                        . ++++++||+|..+..  .+.....+..+.+.++ .||||.|+++   +| |+++++++++.+.+...+++    .+
T Consensus       156 ~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~-~s~SK~~~~~---~G~~~~~~~~~i~~~~~~~~~~~~~~~~~  231 (333)
T PRK10534        156 TRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFT-ICLSKGLGTP---VGSLLVGNRDYIKRARRWRKMTGGGMRQA  231 (333)
T ss_pred             HHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEE-EEeEcCCCCc---ccceEEcCHHHHHHHHHHHHHhCCchhhH
Confidence              3 899999999874321  1122222222322222 4899988754   67 68889999999987766543    33


Q ss_pred             HHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC
Q 014594          316 VAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK  395 (422)
Q Consensus       316 ~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~  395 (422)
                      .+.+.++.++|++  ..+..++.+++|+++.+.|++++ +.+.+++++|+|++++. .+..++.+.|+++||.++++.  
T Consensus       232 ~~~~a~~~~~l~~--~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~~nfv~~~~~~-~~~~~~~~~l~~~gi~v~~~~--  305 (333)
T PRK10534        232 GILAAAGLYALKH--NVARLQEDHDNAAWLAEQLREAG-ADVMRQDTNMLFVRVGE-EQAAALGEYMRERNVLINASP--  305 (333)
T ss_pred             HHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhCC-CccCCCCceEEEEECCc-hhHHHHHHHHHHcCeeecCCc--
Confidence            4667777777754  22333345567889999999986 45666789999999963 357788888889999998874  


Q ss_pred             CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          396 ELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       396 ~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                          ++|++..   +.++++++.++++.
T Consensus       306 ----~~rl~~~~r~t~e~~~~~~~~l~~  329 (333)
T PRK10534        306 ----IVRLVTHLDVSREQLAEVVAHWRA  329 (333)
T ss_pred             ----eEEEEEEeCCCHHHHHHHHHHHHH
Confidence                4677653   45666666666654

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=100.00  E-value=1.3e-31  Score=264.41  Aligned_cols=317  Identities=20%  Similarity=0.212  Sum_probs=240.9

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCC-----------cchHHHHHHHHHHcCC-CCCCEEEeCCHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIYPD-----------PESRRLRAALAKDSGL-ESDHILVGCGADELIDL  161 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~-----------~~~~~lr~~la~~~~~-~~~~i~~~~G~~~al~~  161 (422)
                      .+.+.|+.+.... .++.+.+++.+. ......+.           ....++|+++++++|+ ++++|++|+|++++++.
T Consensus        18 ~~~~yld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~   96 (401)
T PRK10874         18 DAGVYLDSAATAL-KPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINL   96 (401)
T ss_pred             CceEEEeCCcccC-CCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHH
Confidence            3468999887764 567888888652 21111111           1155899999999999 78999999999999999


Q ss_pred             HHHHh----cCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCc
Q 014594          162 IMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (422)
Q Consensus       162 ~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~  233 (422)
                      +++++    +++||+|++++|.|+.    +...++..|++++.++.+.++.+|++++++.++ ++++++++++|+||||.
T Consensus        97 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~t~lv~i~~~~n~tG~  175 (401)
T PRK10874         97 VAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELIT-PRTRILALGQMSNVTGG  175 (401)
T ss_pred             HHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcC-cCcEEEEEeCCcccccC
Confidence            99987    4789999999999863    455667789999999987777899999999996 78999999999999999


Q ss_pred             CCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc---
Q 014594          234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK---  309 (422)
Q Consensus       234 ~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~---  309 (422)
                      +++.+++.++++. |+++|+|++|........    +...+.++++.|++|.+|.+|  +||+++++++++.+....   
T Consensus       176 ~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~----~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~~~  249 (401)
T PRK10874        176 CPDLARAITLAHQAGMVVMVDGAQGAVHFPAD----VQALDIDFYAFSGHKLYGPTG--IGVLYGKSELLEAMSPWQGGG  249 (401)
T ss_pred             cCCHHHHHHHHHHcCCEEEEECCcccccccCC----chhcCCCEEEEecccccCCCc--cEEEEEchHHHhcCCCeecCC
Confidence            9999999999987 999999999974322111    122345588899999888666  699999999888654211   


Q ss_pred             --------------------CCCCCcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHccCCCCccc-CCCceEE
Q 014594          310 --------------------QPYNVSVAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKDVPFLNPY-PSYSNFI  365 (422)
Q Consensus       310 --------------------~~~~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~f~  365 (422)
                                          ...+.+...+.++.++++   +.++....++.++.++++.+.|++++++.+. ++.+.++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~i~  329 (401)
T PRK10874        250 KMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRCQDSSLL  329 (401)
T ss_pred             cceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCcEE
Confidence                                012445555555555553   3333236778888899999999988655543 4555667


Q ss_pred             EEEeCCCCCHHHHHHHHHhCCcEEEeCCCC--------CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          366 LCEVTSGMDAKKLKDDLAKMGVMIRHYNNK--------ELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       366 ~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~--------~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      ++.++ +.+.+++.+.|.++||.++++..+        +..+++|||++   +.++++++.++|+.
T Consensus       330 ~~~~~-~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~  394 (401)
T PRK10874        330 AFDFA-GVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDR  394 (401)
T ss_pred             EEEEC-CcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHH
Confidence            77776 567789999999999999987642        34689999998   78888888888865

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=100.00  E-value=5.5e-31  Score=259.70  Aligned_cols=317  Identities=19%  Similarity=0.220  Sum_probs=238.0

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcC-C-C--CCCC-CCc-------chHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQL-K-F--PYIY-PDP-------ESRRLRAALAKDSGLE-SDHILVGCGADELIDLI  162 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~-~--~~~y-~~~-------~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~~~  162 (422)
                      +.+.|+.+.... .++.+.+++.+. . .  ...+ +..       ...++|+++++++|.+ +++|++|+|++++++++
T Consensus        16 ~~iyld~a~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~   94 (398)
T TIGR03392        16 GTVYLDSAATAL-KPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESINLV   94 (398)
T ss_pred             CeEEeeCccccC-CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHH
Confidence            579999887664 567888888662 1 1  1111 111       1457999999999984 78999999999999999


Q ss_pred             HHHh----cCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594          163 MRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (422)
Q Consensus       163 ~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~  234 (422)
                      +.++    +++||+|++++|.|+.    +...++..|++++.++.+.++.+|++.+++++. ++++++++++|+||||.+
T Consensus        95 ~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~-~~t~lv~i~~~~n~tG~~  173 (398)
T TIGR03392        95 AQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLT-PRTRILALGQMSNVTGGC  173 (398)
T ss_pred             HHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhc-cCceEEEEECcccccccc
Confidence            9987    4789999999999864    455667899999999987777899999999997 689999999999999999


Q ss_pred             CCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc----
Q 014594          235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK----  309 (422)
Q Consensus       235 ~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~----  309 (422)
                      .+.+++.++++. |+++|+|++|........    +...+..+++.|++|.+|.+|  +||+++++++++.+....    
T Consensus       174 ~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~----~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~~~~  247 (398)
T TIGR03392       174 PDLARAITLAHQYGAVVVVDGAQGVVHGPPD----VQALDIDFYAFSGHKLYGPTG--IGVLYGKTELLEAMPPWQGGGK  247 (398)
T ss_pred             CCHHHHHHHHHHcCCEEEEEhhhhcCCCCCC----hhhcCCCEEEEecccccCCCc--eEEEEEcHHHHhhCCCeecCCc
Confidence            999999999987 999999999975432211    112334577888899888666  899999999887663211    


Q ss_pred             -------------------CCCCCcHHHHHHHHHHc---cCChHHHHHHHHHHHHHHHHHHHccCCCCccc-CCCceEEE
Q 014594          310 -------------------QPYNVSVAAEVAACAAL---QNPIYLEVKEALIKERERLFKLLKDVPFLNPY-PSYSNFIL  366 (422)
Q Consensus       310 -------------------~~~~~~~~~~~aa~~~L---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~f~~  366 (422)
                                         ...+.+.....++.+++   .+.++..+.++.++.++++.+.|++++++.+. +....+++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~~~i~~  327 (398)
T TIGR03392       248 MLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPGSSLLA  327 (398)
T ss_pred             eEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCcEEE
Confidence                               01234444444444444   33333337778888999999999988655543 33455677


Q ss_pred             EEeCCCCCHHHHHHHHHhCCcEEEeCCCC--------CCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014594          367 CEVTSGMDAKKLKDDLAKMGVMIRHYNNK--------ELKGYVRVSV---GKPEHTDALMECLMHL  421 (422)
Q Consensus       367 ~~~~~~~~~~~~~~~L~~~gI~v~~~~~~--------~~~~~iRis~---~~~~~~~~l~~al~~l  421 (422)
                      +.++ +.+.+++.+.|.++||.++.+...        +.++++|||+   .+.+|++++.++|+.+
T Consensus       328 ~~~~-~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~  392 (398)
T TIGR03392       328 FDFA-GVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAA  392 (398)
T ss_pred             EEeC-CcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHH
Confidence            7776 567889999999999999987642        3368999998   5778888888888653

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]

Probab=100.00  E-value=1.4e-31  Score=248.12  Aligned_cols=295  Identities=18%  Similarity=0.238  Sum_probs=233.5

Q ss_pred             CCC-CCcchHHHHHHHHHHcC------CCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEE
Q 014594          124 YIY-PDPESRRLRAALAKDSG------LESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVV  195 (422)
Q Consensus       124 ~~y-~~~~~~~lr~~la~~~~------~~~~-~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~  195 (422)
                      ..| +..|..+|...+.++.+      .-.+ +|++|+|.+.+++.+++.++++||.|+++.++|...-...+..|++++
T Consensus        94 lQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~i  173 (472)
T KOG0634|consen   94 LQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKII  173 (472)
T ss_pred             hccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceEE
Confidence            456 44588999999999765      1122 899999999999999999999999999999999988888899999999


Q ss_pred             EecCCCCCCCCHHHHHHHhhc--------CCCeEEEEe-CCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCC
Q 014594          196 KVPRKSDFSLNVELIADAVER--------EKPKCIFLT-SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGL  262 (422)
Q Consensus       196 ~v~~~~~~~~d~~~l~~~i~~--------~~~~~i~l~-~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~  262 (422)
                      +|+++++ ++++|.|++.+.+        ++++++|.. +-+||||..++.+..++|.+.    ++++|+||.|..+.++
T Consensus       174 pv~md~~-Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~  252 (472)
T KOG0634|consen  174 PVKMDQD-GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMN  252 (472)
T ss_pred             eccccCC-CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeecc
Confidence            9998654 8999999998753        347788866 779999999999998887654    9999999999876543


Q ss_pred             C------------c---h-------hhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--CCCcHHH
Q 014594          263 E------------S---R-------MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAA  318 (422)
Q Consensus       263 ~------------~---~-------~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~~~~~~~  318 (422)
                      .            +   .       ....+..+++|...||||.++ ||+|+||+.+++-+++++.+....  -++|.+.
T Consensus       253 ~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~~~~~l~ril~~ae~~t~~pSg~s  331 (472)
T KOG0634|consen  253 TYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITGNSLFLKRILDLAEVATSGPSGFS  331 (472)
T ss_pred             ccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeecCHHHHHHHhhhcceeecCccccc
Confidence            1            0   0       111234689999999999997 999999999999999988776554  3467777


Q ss_pred             HHHHHHHccC---C---hHHH-HHHHHHHHHHHHHHHHcc-CCCC---cccCCCceEEEEEeC-------CCCC-HHHHH
Q 014594          319 EVAACAALQN---P---IYLE-VKEALIKERERLFKLLKD-VPFL---NPYPSYSNFILCEVT-------SGMD-AKKLK  379 (422)
Q Consensus       319 ~~aa~~~L~~---~---~~~~-~~~~~~~~~~~l~~~L~~-~~~~---~~~p~~~~f~~~~~~-------~~~~-~~~~~  379 (422)
                      |..+.+.|+.   +   +|+. ++..|..++..+..+|.+ ++..   ...|.+|+|+|++++       +..+ .+++.
T Consensus       332 q~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i  411 (472)
T KOG0634|consen  332 QGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSINQIEEII  411 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchHHHHHHH
Confidence            7777777764   2   5666 888999999999999987 4433   246889999999997       4444 44444


Q ss_pred             HH-HHhCCcEEEeCCCCC-------CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          380 DD-LAKMGVMIRHYNNKE-------LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       380 ~~-L~~~gI~v~~~~~~~-------~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .. +.++||.+.+|..+.       ..-++|++++..+ .|+|.++++++
T Consensus       412 ~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~-~e~l~~g~~rf  460 (472)
T KOG0634|consen  412 FIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAE-PEKLDEGIERF  460 (472)
T ss_pred             HHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCC-HHHHHHHHHHH
Confidence            44 459999999988721       1239999999765 37899999986

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=100.00  E-value=8.6e-31  Score=255.44  Aligned_cols=280  Identities=19%  Similarity=0.189  Sum_probs=217.4

Q ss_pred             hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHH
Q 014594          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVE  208 (422)
Q Consensus       131 ~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~  208 (422)
                      ..++++.+|+++|++  .+++++|+++++..++.+++++||.|+++.+.|......++..|++++.++.+  .++.+|++
T Consensus        53 ~~~~~e~lA~~~g~~--~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~  130 (370)
T TIGR02539        53 IHDFLEDLAEFLGMD--EARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPE  130 (370)
T ss_pred             HHHHHHHHHHHhCCC--ceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHH
Confidence            568899999999975  56778999999999999999999999999888654446678899999999954  35789999


Q ss_pred             HHHHHhhc------CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccC
Q 014594          209 LIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (422)
Q Consensus       209 ~l~~~i~~------~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~  281 (422)
                      ++++.+++      .++++|++++|+||||...+.+++.++++. |+++|+||+|..+......    ...+..++++|+
T Consensus       131 ~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~----~~~~~di~v~s~  206 (370)
T TIGR02539       131 GYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSA----KEIGADFIVGSG  206 (370)
T ss_pred             HHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCH----HHcCCCEEEeeC
Confidence            99999853      368899999999999999999999999987 9999999999975321111    122345778999


Q ss_pred             hhhhccccccceeeecCHHHHHHHHHhcCCCCCcHH----------HHHHHHHHccC-ChHHHHHHHHHHHHHHHHHHHc
Q 014594          282 SKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVA----------AEVAACAALQN-PIYLEVKEALIKERERLFKLLK  350 (422)
Q Consensus       282 SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~----------~~~aa~~~L~~-~~~~~~~~~~~~~~~~l~~~L~  350 (422)
                      ||.++ +|.|+||+++++++++.+.....+|+.+.+          .+.++.+++.+ .++++..++..++++++++.|+
T Consensus       207 sK~~~-~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~  285 (370)
T TIGR02539       207 HKSMA-ASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELE  285 (370)
T ss_pred             ccccc-CCCCEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99998 567899999999999999887776654433          55555666654 4455523333344568999999


Q ss_pred             cCCCCc--ccCCCceEEEEEeCCC--------CCHHHHHHHHHhCCcE-EEeCCCCCCCCeEEEEe--cChhhHHHHHHH
Q 014594          351 DVPFLN--PYPSYSNFILCEVTSG--------MDAKKLKDDLAKMGVM-IRHYNNKELKGYVRVSV--GKPEHTDALMEC  417 (422)
Q Consensus       351 ~~~~~~--~~p~~~~f~~~~~~~~--------~~~~~~~~~L~~~gI~-v~~~~~~~~~~~iRis~--~~~~~~~~l~~a  417 (422)
                      ++++..  +.|+.++|+++++|..        .+...+.+.|+++||. ++++    .++++||++  .+.++++++.++
T Consensus       286 ~~g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~~----~~~~iRis~~~~t~e~i~~l~~~  361 (370)
T TIGR02539       286 DIGFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRSG----QTKYFKLSVYGLTKEQVEYVVDS  361 (370)
T ss_pred             hCCcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCccccCC----cceEEEEEecCCCHHHHHHHHHH
Confidence            987532  4578899999988621        1234688999999997 6643    257999998  778888888888


Q ss_pred             Hhhh
Q 014594          418 LMHL  421 (422)
Q Consensus       418 l~~l  421 (422)
                      |+.+
T Consensus       362 L~~~  365 (370)
T TIGR02539       362 FEEI  365 (370)
T ss_pred             HHHH
Confidence            7753

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=100.00  E-value=2.6e-30  Score=254.54  Aligned_cols=317  Identities=15%  Similarity=0.162  Sum_probs=233.0

Q ss_pred             CCCCeEEcCCCCC-CCCCCHHHHHHHhc-C-CCCCCCC-Cc---c----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           93 KPEDIVKIDANEN-PYGPPPEVREALGQ-L-KFPYIYP-DP---E----SRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~-~~~~~y~-~~---~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      .+.++|+|..|+. .++++|++++++.+ + .++.+|+ ..   |    ..++|+++++++|.  +++++++|+++++..
T Consensus        36 ~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~--~~~ii~~~~~~a~~~  113 (393)
T TIGR01822        36 DGREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLGT--EDTILYASCFDANGG  113 (393)
T ss_pred             CCceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCC--CcEEEECchHHHHHH
Confidence            4578999999974 67888999888765 2 2233442 12   3    37899999999996  467778899999999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---C--CCeEEEEeCCCCccCcCCC
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---E--KPKCIFLTSPNNPDGSIIN  236 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~--~~~~i~l~~p~NPtG~~~~  236 (422)
                      ++.+++++||.|+++.|.|+.+...++..+++.+.++     ..|++++++.+++   .  ++++|++++++||||.+.+
T Consensus       114 ~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~  188 (393)
T TIGR01822       114 LFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP  188 (393)
T ss_pred             HHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC
Confidence            9999999999999999999999888888888776554     4789999998863   2  7888998899999999999


Q ss_pred             HHHHHHHHcC-CCeEEEccCCccccCCC---chhhhhhc-CCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC
Q 014594          237 DEDLLKILEM-PILVVLDEAYTEFSGLE---SRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (422)
Q Consensus       237 ~e~l~~i~~~-~~~li~Deay~~~~~~~---~~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~  311 (422)
                      .+++.++++. |+++|+||+|.....+.   ......+. .+.+++++|+||.+  +|+|+||+++++++++.+.....+
T Consensus       189 l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l--~g~r~G~~~~~~~~~~~l~~~~~~  266 (393)
T TIGR01822       189 LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKAL--GGASGGFTTARKEVVELLRQRSRP  266 (393)
T ss_pred             HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHh--hCCCcEEEEeCHHHHHHHHHhCcc
Confidence            9999999987 99999999996322211   11111221 24568999999976  478999999999999988765433


Q ss_pred             C----CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCC
Q 014594          312 Y----NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMG  386 (422)
Q Consensus       312 ~----~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~g  386 (422)
                      +    +.++..+.++.++|+..+..+ .+++++++++++.+.|+++++ .+.++.+.++.+.+++..++.++++.|.++|
T Consensus       267 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~i~~~~~~~~~~l~~~L~~~g  345 (393)
T TIGR01822       267 YLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAAGF-DIKPADHPIIPVMLYDAVLAQRFARRLLEEG  345 (393)
T ss_pred             ceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC-CCCCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence            2    234455555666664322334 788899999999999988753 3444455677777664446788999999899


Q ss_pred             cEEEeCCCC---CCCCeEEEEecC---hhhHHHHHHHHh
Q 014594          387 VMIRHYNNK---ELKGYVRVSVGK---PEHTDALMECLM  419 (422)
Q Consensus       387 I~v~~~~~~---~~~~~iRis~~~---~~~~~~l~~al~  419 (422)
                      |.+.....+   .....+||+++.   .++++++.++|+
T Consensus       346 I~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~  384 (393)
T TIGR01822       346 IYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFT  384 (393)
T ss_pred             eeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHH
Confidence            999743221   233579998864   444444544444

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=100.00  E-value=2.1e-30  Score=250.12  Aligned_cols=306  Identities=20%  Similarity=0.201  Sum_probs=227.8

Q ss_pred             CCCCCCCCHHHHHHHhc-CCCCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCc
Q 014594          103 NENPYGPPPEVREALGQ-LKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF  180 (422)
Q Consensus       103 ~~~~~~~~~~v~~al~~-~~~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y  180 (422)
                      .+++++++|.+++++.+ ......| +++...++++.+++++|  ++++++++|+++++..++++++++||+|+++.|+|
T Consensus         4 ~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~   81 (338)
T cd06502           4 SDTVTGPTPEMLEAMAAANVGDDVYGEDPTTAKLEARAAELFG--KEAALFVPSGTAANQLALAAHTQPGGSVICHETAH   81 (338)
T ss_pred             cccCCCCCHHHHHHHHhcccCCcccCCCHHHHHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHhcCCCCeEEEecCcc
Confidence            47899999999999987 3222345 66678999999999999  56788888888999999999999999999999998


Q ss_pred             hhHHH---HHHHcCCEEEEecCCCCCCCCHHHHHHHhhc------CCCeEEEEeCCCCccCcCCCHHHHHHHHcC----C
Q 014594          181 TMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILEM----P  247 (422)
Q Consensus       181 ~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~  247 (422)
                      ..+..   .+...|++++.++.+. +.+|++++++++++      +++++|+++||+|| |.+++.+++++|++.    |
T Consensus        82 ~~~~~~~~~~~~~g~~~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~~  159 (338)
T cd06502          82 IYTDEAGAPEFLSGVKLLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKENG  159 (338)
T ss_pred             eeeecCCcHHHHcCceEEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHcC
Confidence            64332   3455899999999754 68999999999863      27899999999997 667788887777653    8


Q ss_pred             CeEEEccCCcccc--CCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC----CCCCcHHHHHH
Q 014594          248 ILVVLDEAYTEFS--GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ----PYNVSVAAEVA  321 (422)
Q Consensus       248 ~~li~Deay~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~----~~~~~~~~~~a  321 (422)
                      +++|+||+|..+.  ..+........ +..+++.|+||.++++|  .+++++++++++.+.....    .++.+.+.+.+
T Consensus       160 ~~livDea~~~~~~~~~~~~~~~~~~-~~d~~~~s~sK~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  236 (338)
T cd06502         160 LPLHLDGARLANAAAALGVALKTYKS-GVDSVSFCLSKGGGAPV--GAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAA  236 (338)
T ss_pred             CeEeechHHHHHHHHhcCCCHHHHHh-cCCEEEEeccccCCCcc--ceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHH
Confidence            9999999986442  11112222212 22356889999999887  2345678999988876542    34567788888


Q ss_pred             HHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCC-CCHHHHHHHHH---hCCcEEEeCCCCCC
Q 014594          322 ACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG-MDAKKLKDDLA---KMGVMIRHYNNKEL  397 (422)
Q Consensus       322 a~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~-~~~~~~~~~L~---~~gI~v~~~~~~~~  397 (422)
                      +..+|++..+.+..+++.++++++.+.|+++++ .+.+..++|+.++++.+ .....+.+.+.   ++|+.+.+..    
T Consensus       237 ~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~~~~----  311 (338)
T cd06502         237 GLAALENDLWLRRLRHDHEMARRLAEALEELGG-LESEVQTNIVLLDPVEANAVFVELSKEAIERRGEGVLFYAWG----  311 (338)
T ss_pred             HHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCC-CcccccCCeEEEecCCccHHHHHHHHHHHHhhhCCEEEEecC----
Confidence            888898776666667888889999999999875 55677889998887522 11223333333   6799998764    


Q ss_pred             CCeEEEEec---ChhhHHHHHHHHhh
Q 014594          398 KGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       398 ~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      .+++||++.   +.++++++.++++.
T Consensus       312 ~~~lRi~~~~~~~~~~i~~~~~~l~~  337 (338)
T cd06502         312 EGGVRFVTHWDTTEEDVDELLSALKA  337 (338)
T ss_pred             CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence            289999998   56666666666653

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=100.00  E-value=5.5e-30  Score=248.98  Aligned_cols=312  Identities=18%  Similarity=0.123  Sum_probs=233.3

Q ss_pred             CCCCCCCHHHHHHHhcCCCCCCCCCcc--hHHHHHHHHHHcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCc
Q 014594          104 ENPYGPPPEVREALGQLKFPYIYPDPE--SRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPTF  180 (422)
Q Consensus       104 ~~~~~~~~~v~~al~~~~~~~~y~~~~--~~~lr~~la~~~~~~~~-~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y  180 (422)
                      ..|.+.++.+.+++.+....++|+...  ..++++.+++++|++++ .+++++|+++++..++.+++++||+|++..++|
T Consensus         5 ~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~   84 (356)
T cd06451           5 PGPSNVPPRVLKAMNRPMLGHRSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGV   84 (356)
T ss_pred             CCCcCCCHHHHHHhCCCccCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCc
Confidence            355667899999997643335666543  67899999999998544 578899999999999999999999999998877


Q ss_pred             hh--HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCc
Q 014594          181 TM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT  257 (422)
Q Consensus       181 ~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~  257 (422)
                      ..  +...++..|++++.++.+.++.+|++++++.++++++++|++++|+||||.+.+.+++.++++. |+++++|++|.
T Consensus        85 ~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~  164 (356)
T cd06451          85 FGDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSS  164 (356)
T ss_pred             hhHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehh
Confidence            54  5567788999999999776678999999999974489999999999999999999999999987 99999999986


Q ss_pred             cccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHH--hc-------------------CCCCCcH
Q 014594          258 EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR--AK-------------------QPYNVSV  316 (422)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~--~~-------------------~~~~~~~  316 (422)
                      ...   .... ....+..+++.|.+|.++.+ .++||++.++++++.+..  ..                   ...+.+.
T Consensus       165 ~g~---~~~~-~~~~~~d~~~~s~~K~l~~p-~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~  239 (356)
T cd06451         165 LGG---EPFR-MDEWGVDVAYTGSQKALGAP-PGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPV  239 (356)
T ss_pred             ccC---cccc-ccccCccEEEecCchhccCC-CCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChH
Confidence            321   1111 11223346778899988744 368999999998887753  00                   1112344


Q ss_pred             HHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC---CceEEEEEeCCCCCHHHHHHHHHhC-CcEE
Q 014594          317 AAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPS---YSNFILCEVTSGMDAKKLKDDLAKM-GVMI  389 (422)
Q Consensus       317 ~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~~f~~~~~~~~~~~~~~~~~L~~~-gI~v  389 (422)
                      ..+.++.++++.  ....+ ..++.+++++++.+.|+++++....+.   .+.++|+.++++.+..++++.|.++ ||.+
T Consensus       240 ~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gI~~  319 (356)
T cd06451         240 NLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAKPELRSPTVTAVLVPEGVDGDEVVRRLMKRYNIEI  319 (356)
T ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCCceEEEECCCCCCHHHHHHHHHHhCCEEE
Confidence            444555555533  12334 777888999999999988764222221   2345577777677889999999987 9999


Q ss_pred             EeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          390 RHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       390 ~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      +++..+..+++||++++   +.++++++.++|+.
T Consensus       320 ~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~  353 (356)
T cd06451         320 AGGLGPTAGKVFRIGHMGEATREDVLGVLSALEE  353 (356)
T ss_pred             ecccccccCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence            98765555679999995   56677777777765

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=100.00  E-value=4.8e-30  Score=254.51  Aligned_cols=331  Identities=16%  Similarity=0.164  Sum_probs=239.2

Q ss_pred             CCchHHHHHHhCCCCCCeEEcCCCCC--CCCCCH---HHHHHHhc-CCC-CCCC-CCcchHHHHHHHHHHcCCCCCCEEE
Q 014594           80 ILPFEVLSIQLGRKPEDIVKIDANEN--PYGPPP---EVREALGQ-LKF-PYIY-PDPESRRLRAALAKDSGLESDHILV  151 (422)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~i~l~~~~~--~~~~~~---~v~~al~~-~~~-~~~y-~~~~~~~lr~~la~~~~~~~~~i~~  151 (422)
                      ....+..+++....+.++|+|..+++  ++.++.   .+.+++.+ +.. ...| +..+..+||++++++++.  +++++
T Consensus        21 ~~~~~~~~~~l~~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~~~Y~~~~g~~~Lreaia~~~~~--~~vv~   98 (460)
T PRK13238         21 LTTREERERALAEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGDEAYAGSRSYYRLEDAVKDIFGY--PYTIP   98 (460)
T ss_pred             ccCHHHHHHHHHHcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCCcccCCCCCHHHHHHHHHHHhCC--CcEEE
Confidence            34455566666667788999999998  677655   45555443 222 2568 566899999999999985  58999


Q ss_pred             eCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--------CCCC--CCHHHHHHHhhc---CC
Q 014594          152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--------SDFS--LNVELIADAVER---EK  218 (422)
Q Consensus       152 ~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--------~~~~--~d~~~l~~~i~~---~~  218 (422)
                      |+|+++++.+++.++++||| |++++|.|..|....+..|++++.++.+        ++|.  +|+++|++.+++   ++
T Consensus        99 t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~  177 (460)
T PRK13238         99 THQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAEN  177 (460)
T ss_pred             CCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCc
Confidence            99999999999999999999 9999999999998888999999999864        2454  999999999974   37


Q ss_pred             CeEEEEeCCCCccC-cCCCHHHHHHHHc---C-CCeEEEccCCcc----ccC------CCchhhhhhcCCcEEEEccChh
Q 014594          219 PKCIFLTSPNNPDG-SIINDEDLLKILE---M-PILVVLDEAYTE----FSG------LESRMEWVKKHDNLIVLRTFSK  283 (422)
Q Consensus       219 ~~~i~l~~p~NPtG-~~~~~e~l~~i~~---~-~~~li~Deay~~----~~~------~~~~~~~~~~~~~~i~~~S~SK  283 (422)
                      +++|++++|+|||| .+++.+++++|++   . |++||+|+++..    |..      .+..+..+     +..++|++|
T Consensus       178 tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i-----~~~~~s~~D  252 (460)
T PRK13238        178 VPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI-----AREMFSYAD  252 (460)
T ss_pred             eeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH-----hhhhcccCc
Confidence            99999999999998 9999887666654   3 999999997742    211      11111111     233456666


Q ss_pred             hhccccccc------eeeecC-HHHHHHHHHhcC------CCCC-cHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHH
Q 014594          284 RAGLAGLRV------GYGAFP-LSIIEYLWRAKQ------PYNV-SVAAEVAACAALQN---PIYLEVKEALIKERERLF  346 (422)
Q Consensus       284 ~~~~~G~r~------G~i~~~-~~~~~~l~~~~~------~~~~-~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~  346 (422)
                      .+.++|+|+      |+++++ +++++++.....      .++. +...|.|+..+|.+   .++.+   ...+++++|.
T Consensus       253 ~~~~Sg~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~---~~~~~~~~l~  329 (460)
T PRK13238        253 GLTMSAKKDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLA---YRIGQVEYLG  329 (460)
T ss_pred             EEEEecccCCCCcceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHH---HHHHHHHHHH
Confidence            666666664      366666 588888876631      2333 44557777766654   23333   2233679999


Q ss_pred             HHHccCCCCcccCCCceEEEEEeCC--------CCCHHHHHHHHH-hCCcEEEeCCC---C----C------CCCeEEEE
Q 014594          347 KLLKDVPFLNPYPSYSNFILCEVTS--------GMDAKKLKDDLA-KMGVMIRHYNN---K----E------LKGYVRVS  404 (422)
Q Consensus       347 ~~L~~~~~~~~~p~~~~f~~~~~~~--------~~~~~~~~~~L~-~~gI~v~~~~~---~----~------~~~~iRis  404 (422)
                      +.|++.|+-.+.|.+|.|+++++..        +..+.+++.+|. +.||.+.+++.   .    .      ...++|++
T Consensus       330 ~~L~~~G~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla  409 (460)
T PRK13238        330 EGLEEAGVPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLA  409 (460)
T ss_pred             HHHHHCCCCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEe
Confidence            9999887656678999999998752        124677888877 89999988664   1    1      14799999


Q ss_pred             ecC----hhhHHHHHHHHhhh
Q 014594          405 VGK----PEHTDALMECLMHL  421 (422)
Q Consensus       405 ~~~----~~~~~~l~~al~~l  421 (422)
                      +..    .+++|.+.++|+.+
T Consensus       410 ~~rr~~~~~~~~~~~~~l~~~  430 (460)
T PRK13238        410 IPRRVYTQSHMDYVAEALKAV  430 (460)
T ss_pred             cccccCCHHHHHHHHHHHHHH
Confidence            873    55566666666654

>PLN02721 threonine aldolase

Probab=100.00  E-value=3.1e-30  Score=250.42  Aligned_cols=311  Identities=21%  Similarity=0.192  Sum_probs=220.4

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcC--CCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcC-CCCE
Q 014594           96 DIVKIDANENPYGPPPEVREALGQL--KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD-PGDK  172 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~--~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~-~gd~  172 (422)
                      .+++|+.|.+++ +++.+.+++...  .....|+++...+||++++++++.+  .+++++++++++..++.++++ +||+
T Consensus         6 ~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~~~~~~Gs~a~~~~l~~~~~~~gd~   82 (353)
T PLN02721          6 RVVDLRSDTVTK-PTDAMRAAMANAEVDDDVLGYDPTALRLEEEMAKIFGKE--AALFVPSGTMGNLISVLVHCDVRGSE   82 (353)
T ss_pred             hhhhhhcccccC-CCHHHHHHHHhccCCCcccCCCHHHHHHHHHHHHHhCCc--eeEEecCccHHHHHHHHHHccCCCCe
Confidence            468999999997 678888998753  3334455566889999999999974  345555556666677777777 9999


Q ss_pred             EEEcCCCch-hHHH--HHHHcCCEEEEecCCCCCCCCHHHHHHHhhc------CCCeEEEEeC-CCCccCcCCCHHHHHH
Q 014594          173 IVDCPPTFT-MYEF--DAAVNGAAVVKVPRKSDFSLNVELIADAVER------EKPKCIFLTS-PNNPDGSIINDEDLLK  242 (422)
Q Consensus       173 Vl~~~p~y~-~~~~--~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------~~~~~i~l~~-p~NPtG~~~~~e~l~~  242 (422)
                      |++++|+|. .+..  .+...|++++.++.++++.+|++++++.+++      +++++|++++ +|||||.+++.+++++
T Consensus        83 Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~  162 (353)
T PLN02721         83 VILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDK  162 (353)
T ss_pred             EEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHH
Confidence            999999985 3432  5667899999999777778999999999964      4789999986 5789999999776666


Q ss_pred             H---HcC-CCeEEEccCCccccC---CCchhhhhhcCCcEEEEccChhhhcccccccee-eecCHHHHHHHHHhcCCCC-
Q 014594          243 I---LEM-PILVVLDEAYTEFSG---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY-GAFPLSIIEYLWRAKQPYN-  313 (422)
Q Consensus       243 i---~~~-~~~li~Deay~~~~~---~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~-i~~~~~~~~~l~~~~~~~~-  313 (422)
                      |   ++. |+++|+||+|.....   +..........+  .++.|+||.++.   ++|+ +++++++++.+......++ 
T Consensus       163 l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~l~~---~~G~~~~~~~~~~~~~~~~~~~~~~  237 (353)
T PLN02721        163 VGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAAD--SVSVCLSKGLGA---PVGSVIVGSKSFIRKAKRLRKTLGG  237 (353)
T ss_pred             HHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCC--EEEEecccccCC---ceeeEEecCHHHHHhHHHHHHhcCC
Confidence            5   444 999999999863321   111111111222  445579998763   3565 6789999888766654432 


Q ss_pred             -CcHHHHHH--HHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCc--ccCCCceEEEEEeCCC--CCHHHHHHHHHhCC
Q 014594          314 -VSVAAEVA--ACAALQNPIYLEVKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTSG--MDAKKLKDDLAKMG  386 (422)
Q Consensus       314 -~~~~~~~a--a~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~f~~~~~~~~--~~~~~~~~~L~~~g  386 (422)
                       .+...+.+  +...+  .++.+..++..++++++.+.|++++.+.  +.+..++|+|++++..  .+.+.+++.|.++|
T Consensus       238 ~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g  315 (353)
T PLN02721        238 GMRQVGVLAAAALVAL--QENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSRITAEKLCKSLEEHG  315 (353)
T ss_pred             CeehhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCccccHHHHHHHHHhCC
Confidence             22222222  22333  2334433344567889999999886552  4456678999998753  57889999999999


Q ss_pred             cEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          387 VMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       387 I~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      |.++++.    .+++|++++   +.++++++.+++++
T Consensus       316 i~v~~~~----~~~lR~~~~~~~~~~~i~~~~~~l~~  348 (353)
T PLN02721        316 VLLMPGN----SSRIRVVTHHQISDSDVQYTLSCFQQ  348 (353)
T ss_pred             cEEecCC----CceEEEEecCcCCHHHHHHHHHHHHH
Confidence            9999875    579999997   56666777776654

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.98  E-value=4.5e-30  Score=249.89  Aligned_cols=306  Identities=19%  Similarity=0.205  Sum_probs=226.5

Q ss_pred             CCCCCHHHHHHHhcCCCCC--------CC---CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 014594          106 PYGPPPEVREALGQLKFPY--------IY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV  174 (422)
Q Consensus       106 ~~~~~~~v~~al~~~~~~~--------~y---~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl  174 (422)
                      +-+..+++.+++.+...+.        ..   .++...++++++++++|+  +++++++|+++++..++.+++++||+|+
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~i~~~~g~t~al~~~l~~~~~~gd~Vl   87 (361)
T cd06452          10 GGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--DEARVTPGAREGKFAVMHSLCEKGDWVV   87 (361)
T ss_pred             CCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCC--ceEEEeCCHHHHHHHHHHHhcCCCCEEE
Confidence            3345677888887632110        11   123467999999999998  7899999999999999999999999999


Q ss_pred             EcCCCchhHHHHHHHcCCEEEEecCCCC--CCCCHHHHHHHhhc------CCCeEEEEeCCCCccCcCCCHHHHHHHHcC
Q 014594          175 DCPPTFTMYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILEM  246 (422)
Q Consensus       175 ~~~p~y~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~------~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~  246 (422)
                      ++.++|......++..|++++.++.+.+  +.+|++.+++++.+      .++++++++||+||||...+.+++.++++.
T Consensus        88 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~  167 (361)
T cd06452          88 VDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHE  167 (361)
T ss_pred             EcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHH
Confidence            9999887665677889999999996543  58999999998863      378999999999999999999999999987


Q ss_pred             -CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcH---------
Q 014594          247 -PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSV---------  316 (422)
Q Consensus       247 -~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~---------  316 (422)
                       |+++|+|++|........    ....+.+++++|++|.++ ++.|+||+++++++++++.+...+|+.+.         
T Consensus       168 ~~~~vivD~a~~~g~~~~~----~~~~~~d~~~~s~~K~l~-~~~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  242 (361)
T cd06452         168 YGVPLLLNGAYTVGRMPVS----GKELGADFIVGSGHKSMA-ASAPIGVLATTEEWADIVFRTSQMFKIKEVELLGCTLR  242 (361)
T ss_pred             cCCeEEEECCcccCCcCCC----HHHcCCCEEEecCCcccc-CCCCeEEEEECHHHHHHHhccccccccceeeeeccccC
Confidence             999999999984321111    113355699999999997 55699999999999999877665543322         


Q ss_pred             -HHHHHHHHHccC-ChHHHHHHHHHHHHHHHHHHHccCCCCccc---CCCceEEEEEeCC--------CCCHHHHHHHHH
Q 014594          317 -AAEVAACAALQN-PIYLEVKEALIKERERLFKLLKDVPFLNPY---PSYSNFILCEVTS--------GMDAKKLKDDLA  383 (422)
Q Consensus       317 -~~~~aa~~~L~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---p~~~~f~~~~~~~--------~~~~~~~~~~L~  383 (422)
                       ..+.++.+++.. .++++..++..++++++.+.|++++++.+.   ++..+|+.++.+.        .....++.+.|+
T Consensus       243 ~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~  322 (361)
T cd06452         243 GAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELK  322 (361)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHHHH
Confidence             123333333322 233333333345568899999998545543   5667888887651        112236899999


Q ss_pred             hCCcEEEeCCCCCCCCeEEEEe--cChhhHHHHHHHHhhh
Q 014594          384 KMGVMIRHYNNKELKGYVRVSV--GKPEHTDALMECLMHL  421 (422)
Q Consensus       384 ~~gI~v~~~~~~~~~~~iRis~--~~~~~~~~l~~al~~l  421 (422)
                      ++||.+..   .+..+++|++.  .++++++.+.++|+.+
T Consensus       323 ~~gI~~~~---~~~~~~~ri~~~g~~~e~~~~l~~al~~~  359 (361)
T cd06452         323 KRGIHGIK---PGLTRYFKLSTYGLTWEQVEYVVDAFKEI  359 (361)
T ss_pred             HcCceEEc---CCCceEEEEEecCCCHHHHHHHHHHHHHH
Confidence            99999632   23456999999  6888899999998864

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=99.98  E-value=1.2e-29  Score=249.14  Aligned_cols=317  Identities=19%  Similarity=0.159  Sum_probs=232.9

Q ss_pred             CCCCeEEcCCCCC-CCCCCHHHHHHHhc-CC-CCC---CC-----CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           93 KPEDIVKIDANEN-PYGPPPEVREALGQ-LK-FPY---IY-----PDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~~-~~~---~y-----~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      .++++|||..+++ .+.++|++.+++.+ +. +..   .|     +.+...+++++++++++. ++.++++ ++++++..
T Consensus        37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-~~~i~~~-~g~~~~~~  114 (385)
T PRK05958         37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGA-ERALLFS-SGYAANLA  114 (385)
T ss_pred             CCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-CcEEEEC-cHHHHHHH
Confidence            5678999999875 34567889988876 21 111   11     122357899999999983 4455555 45566666


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC--CCeEEEEeCCCCccCcCCCHHH
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGSIINDED  239 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~~~~~e~  239 (422)
                      +++.++++||.|+++.|+|+.+...+...|++++.++.     .|++.+++.++..  +++++++.+++||||...+.++
T Consensus       115 ~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~  189 (385)
T PRK05958        115 VLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-----NDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAE  189 (385)
T ss_pred             HHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHH
Confidence            77888999999999999999998888889999988873     4789999988642  3556666689999999999999


Q ss_pred             HHHHHcC-CCeEEEccCCccccCC--Cc-hhh--hhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCC-
Q 014594          240 LLKILEM-PILVVLDEAYTEFSGL--ES-RME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY-  312 (422)
Q Consensus       240 l~~i~~~-~~~li~Deay~~~~~~--~~-~~~--~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~-  312 (422)
                      +.++|+. |+++|+||+|..+..+  +. ...  .+...++++++.|+||.++.+|   ||+++++++.+.+.....++ 
T Consensus       190 i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~~~~~~~~~  266 (385)
T PRK05958        190 LVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGSETLIDYLINRARPFI  266 (385)
T ss_pred             HHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcCHHHHHHHHHhCccce
Confidence            9999997 9999999999764322  11 121  1233567899999999998766   99999999988876544332 


Q ss_pred             ---CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014594          313 ---NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVM  388 (422)
Q Consensus       313 ---~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~  388 (422)
                         +.++..+.++.++|+..+..+ ..+++.++++++.+.|++++ +.+.++.++|+++.+++..++.++.+.|.++||.
T Consensus       267 ~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~  345 (385)
T PRK05958        267 FTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRALG-FQLMDSQSAIQPLIVGDNERALALAAALQEQGFW  345 (385)
T ss_pred             ecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CCcCCCCCCEEEEEeCCHHHHHHHHHHHHHCCce
Confidence               345566666666775422114 77889999999999999876 3455667889999987545677899999999999


Q ss_pred             EEeCCCC---CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          389 IRHYNNK---ELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       389 v~~~~~~---~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      ++++..+   ..++++||+++   +.++++++.++|+.
T Consensus       346 v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~  383 (385)
T PRK05958        346 VGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAE  383 (385)
T ss_pred             EecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHh
Confidence            9875432   23579999997   55555555555543

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=99.98  E-value=8.8e-30  Score=251.64  Aligned_cols=319  Identities=21%  Similarity=0.218  Sum_probs=238.7

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCC-------CCCc----chHHHHHHHHHHcCCC-CCCEEEeCCHHHHHH
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQL-KFPYI-------YPDP----ESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~-------y~~~----~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~  160 (422)
                      +.+++.|+.+... ++++.+.+++.+. .....       +...    ...++|+.+++++|.+ +++|++|+|+++++.
T Consensus        16 ~~~~~yld~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~   94 (403)
T TIGR01979        16 GKPLVYLDSAATS-QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESIN   94 (403)
T ss_pred             CCceEEEeCcccc-CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHH
Confidence            4567999998776 3567788888652 11111       1111    2458999999999997 689999999999999


Q ss_pred             HHHHHh----cCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccC
Q 014594          161 LIMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG  232 (422)
Q Consensus       161 ~~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG  232 (422)
                      +++.++    +++||+|+++++.|+.    +...++..|++++.++.++++.+|++.+++.+. ++++++++++|+||||
T Consensus        95 ~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~-~~~~lv~~~~~~~~tG  173 (403)
T TIGR01979        95 LVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLT-EKTKLVAITHVSNVLG  173 (403)
T ss_pred             HHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhc-cCCeEEEEEccccccc
Confidence            998875    5789999999998764    345566789999999977777899999999997 6899999999999999


Q ss_pred             cCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc--
Q 014594          233 SIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK--  309 (422)
Q Consensus       233 ~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~--  309 (422)
                      .++|.+++.++++. |+++|+|++|......    ..+...+.++++.|++|.+|.+|  +|++++++++++.+....  
T Consensus       174 ~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~----~~~~~~~~d~~~~s~~K~~gp~G--~g~l~~~~~~~~~~~~~~~g  247 (403)
T TIGR01979       174 TVNPVEEIAKLAHQVGAKVLVDGAQAVPHMP----VDVQALDCDFYVFSGHKMYGPTG--IGVLYGKEELLEQMPPFLGG  247 (403)
T ss_pred             ccCCHHHHHHHHHHcCCEEEEEchhhcCccc----cCccccCCCEEEEecccccCCCC--ceEEEEchHHHhcCCCeecC
Confidence            99999999999987 9999999999743211    11223356689999999887666  899999988877653110  


Q ss_pred             ---------------------CCCCCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCccc-CC----
Q 014594          310 ---------------------QPYNVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPY-PS----  360 (422)
Q Consensus       310 ---------------------~~~~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p~----  360 (422)
                                           ...+.+.....++.++++.-  ...+ .+++..+.++++.+.|++++++.+. |.    
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~  327 (403)
T TIGR01979       248 GEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAED  327 (403)
T ss_pred             CCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccc
Confidence                                 01134555555666655431  1234 7788899999999999888656543 32    


Q ss_pred             CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          361 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       361 ~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~--------~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      .+.++.+.++ +.+..++.+.|.++||.++.+..        .+.++++|||++   +.++++++.++|+.+
T Consensus       328 ~~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~  398 (403)
T TIGR01979       328 RGGIISFNVE-GVHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKV  398 (403)
T ss_pred             cCceEEEEeC-CcCHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHH
Confidence            2667778876 45678898889999999987642        233689999987   677888888888654

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>PRK02948 cysteine desulfurase; Provisional

Probab=99.98  E-value=2.2e-30  Score=254.03  Aligned_cols=314  Identities=17%  Similarity=0.139  Sum_probs=233.3

Q ss_pred             EEcCCCCCCCCCCHHHHHHHhcC-C-CC----CCCCC-----cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 014594           98 VKIDANENPYGPPPEVREALGQL-K-FP----YIYPD-----PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (422)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~-~-~~----~~y~~-----~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l  166 (422)
                      +.|+.+.... +++.+++++.+. . ..    ..+..     .-..++|+.+++++|+++++|++++|+++++..++.++
T Consensus         2 ~yld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~   80 (381)
T PRK02948          2 IYLDYAATTP-MSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSL   80 (381)
T ss_pred             EeccCCCCCC-CCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHH
Confidence            5677766553 567888888652 1 10    11110     11457899999999999999999999999999998877


Q ss_pred             c----CCCCEEEEcCCCchhH---HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594          167 L----DPGDKIVDCPPTFTMY---EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (422)
Q Consensus       167 ~----~~gd~Vl~~~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~  239 (422)
                      +    ++||.|++....|+.+   ...++..|++++.++.++++.+|++++++.++ +++++|++++|+||||.++|.++
T Consensus        81 ~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-~~~~lv~~~~~~n~tG~~~~~~~  159 (381)
T PRK02948         81 LNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAIT-PDTVLASIQHANSEIGTIQPIAE  159 (381)
T ss_pred             HHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcC-CCCEEEEEECCcCCcEeehhHHH
Confidence            5    5789999988666544   44456689999999977777899999999996 68999999999999999999999


Q ss_pred             HHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHH-HHHHH------HhcCC
Q 014594          240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-IEYLW------RAKQP  311 (422)
Q Consensus       240 l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~-~~~l~------~~~~~  311 (422)
                      +.++++. |+++++|+++.. ...+.   .+...+.++++.|++|.+|.+|  +|++++++++ +....      ....+
T Consensus       160 I~~l~~~~~~~vivD~~~~~-g~~~~---~~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~  233 (381)
T PRK02948        160 IGALLKKYNVLFHSDCVQTF-GKLPI---DVFEMGIDSLSVSAHKIYGPKG--VGAVYINPQVRWKPVFPGTTHEKGFRP  233 (381)
T ss_pred             HHHHHHHcCCEEEEEChhhc-ccccc---CcccCCCCEEEecHHhcCCCCc--EEEEEEcCCCCCCCcccCCCCCCCcCC
Confidence            9999987 999999976653 21111   1224466788999999998888  7999887764 11111      01135


Q ss_pred             CCCcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC-ceE-----EEEEeCCCCCHHHHHHHHH
Q 014594          312 YNVSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFLNPYPSY-SNF-----ILCEVTSGMDAKKLKDDLA  383 (422)
Q Consensus       312 ~~~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~-~~f-----~~~~~~~~~~~~~~~~~L~  383 (422)
                      ++++.+++.++.++++.. ++.+ .++++++.++++.+.|++++.. +.+.+ .++     +.+.++ +.+.+++...|.
T Consensus       234 ~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-v~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~  311 (381)
T PRK02948        234 GTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLPLP-IEVEGHSTSCLPHIIGVTIK-GIEGQYTMLECN  311 (381)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-EEEeCCCccCcCCEEEEEeC-CCCHHHHHHhcc
Confidence            788899999999888763 5666 8899999999999999998642 22221 232     333444 457788888888


Q ss_pred             hCCcEEEeCCCC-------------------CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          384 KMGVMIRHYNNK-------------------ELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       384 ~~gI~v~~~~~~-------------------~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      ++||.++.+...                   ...+++|||++   +.++++++.++|+.+
T Consensus       312 ~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~  371 (381)
T PRK02948        312 RRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETI  371 (381)
T ss_pred             cCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHH
Confidence            999999976531                   12479999998   788888898888753

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=99.97  E-value=2.3e-29  Score=248.74  Aligned_cols=318  Identities=18%  Similarity=0.197  Sum_probs=237.7

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-CCCC------CCC-C----cchHHHHHHHHHHcCC-CCCCEEEeCCHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-KFPY------IYP-D----PESRRLRAALAKDSGL-ESDHILVGCGADELIDL  161 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~------~y~-~----~~~~~lr~~la~~~~~-~~~~i~~~~G~~~al~~  161 (422)
                      .+++.|+.+.... +++.+.+++.+. ....      .|. .    ....++|++++++++. ++++|++|+|++++++.
T Consensus        22 ~~~iYld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~  100 (406)
T PRK09295         22 LPLAYLDSAASAQ-KPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGINL  100 (406)
T ss_pred             CceEEEeCccccc-CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHH
Confidence            3579999887554 567788887652 1101      111 0    1145899999999997 67899999999999999


Q ss_pred             HHHH----hcCCCCEEEEcCCCch----hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCc
Q 014594          162 IMRC----VLDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (422)
Q Consensus       162 ~~~~----l~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~  233 (422)
                      ++.+    ++++||+|+++.+.|+    .+...++..|++++.++.+.++.+|+++++++++ +++++|++++|+||||.
T Consensus       101 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~t~lv~l~~~~n~tG~  179 (406)
T PRK09295        101 VANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFD-ERTRLLAITHVSNVLGT  179 (406)
T ss_pred             HHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcC-CCcEEEEEecchhcccc
Confidence            9886    4689999999998875    3455667789999999977777899999999997 68999999999999999


Q ss_pred             CCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh----
Q 014594          234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA----  308 (422)
Q Consensus       234 ~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~----  308 (422)
                      ++|.+++.++++. |+++++|++|......   + .+...+.++++.|++|.+|.+|  +||+++++++++.+...    
T Consensus       180 ~~~~~~i~~~~~~~~~~vivD~a~~~g~~~---~-~~~~~~~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~g~  253 (406)
T PRK09295        180 ENPLAEMIALAHQHGAKVLVDGAQAVMHHP---V-DVQALDCDFYVFSGHKLYGPTG--IGILYVKEALLQEMPPWEGGG  253 (406)
T ss_pred             cCCHHHHHHHHHHcCCEEEEEcccccCccc---c-CchhcCCCEEEeehhhccCCCC--cEEEEEchHhHhhCCCcccCC
Confidence            9999999999987 9999999999754321   1 1223345688899999888666  89999999887654210    


Q ss_pred             --------------------cCCCCCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCccc-C-CCce
Q 014594          309 --------------------KQPYNVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPY-P-SYSN  363 (422)
Q Consensus       309 --------------------~~~~~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p-~~~~  363 (422)
                                          ....+.+.....++.++++.-  ...+ ++++.++.++++.+.|++++.+.+. | ....
T Consensus       254 ~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~  333 (406)
T PRK09295        254 SMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLG  333 (406)
T ss_pred             ceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCce
Confidence                                011256666666666666532  1234 7788889999999999888655543 2 2245


Q ss_pred             EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          364 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       364 f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~--------~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      .+.+.++ +.+.+++.+.|.++||.++.|..        .+.++++|+|+.   +.+|+|.|.++|+.+
T Consensus       334 iv~~~~~-~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i  401 (406)
T PRK09295        334 VIAFNLG-KHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRI  401 (406)
T ss_pred             EEEEEEC-CcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHH
Confidence            6667776 45778898889899999987653        123578999976   677888888888765

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=99.97  E-value=2.3e-29  Score=248.13  Aligned_cols=319  Identities=17%  Similarity=0.179  Sum_probs=229.3

Q ss_pred             CCCCeEEcCCCC-CCCCCCHHHHHHHhcC--CCCCCCCC----cch----HHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           93 KPEDIVKIDANE-NPYGPPPEVREALGQL--KFPYIYPD----PES----RRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        93 ~~~~~i~l~~~~-~~~~~~~~v~~al~~~--~~~~~y~~----~~~----~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      .+.++|+|..++ ..++++|++.+++.+.  ...+.|+.    .|.    .++++.++++++.+ ++|++|+| ++++..
T Consensus        40 ~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~-~~i~~tsG-~~a~~~  117 (397)
T PRK06939         40 DGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTE-DAILYSSC-FDANGG  117 (397)
T ss_pred             CCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCC-cEEEEcCh-HHHHHH
Confidence            467899999887 5777889888877662  22233321    233    46777778888864 67888888 678888


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---C--CCeEEEEeCCCCccCcCCC
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---E--KPKCIFLTSPNNPDGSIIN  236 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~--~~~~i~l~~p~NPtG~~~~  236 (422)
                      ++++++++||.|++++|+|+.+...++..|++++.++.     .|++.+++.+++   +  ++++|++.+.+||+|...+
T Consensus       118 ~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~  192 (397)
T PRK06939        118 LFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP  192 (397)
T ss_pred             HHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC
Confidence            89999999999999999999998888889999888763     478888888753   2  6778887788999999999


Q ss_pred             HHHHHHHHcC-CCeEEEccCCccc-cC-CCc-hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC
Q 014594          237 DEDLLKILEM-PILVVLDEAYTEF-SG-LES-RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (422)
Q Consensus       237 ~e~l~~i~~~-~~~li~Deay~~~-~~-~~~-~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~  311 (422)
                      .+++.++++. ++++|+||+|... .. .+. ...... ..+.+++++||||.++  |+|+||+++++++++.+.....+
T Consensus       193 ~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~--g~r~G~v~~~~~~~~~l~~~~~~  270 (397)
T PRK06939        193 LPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALG--GASGGYTAGRKEVIDWLRQRSRP  270 (397)
T ss_pred             HHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhC--ccCceEEEeCHHHHHHHHHhCcc
Confidence            9999999987 9999999999632 21 111 122222 1245799999999884  56999999999999988765443


Q ss_pred             C----CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCC
Q 014594          312 Y----NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMG  386 (422)
Q Consensus       312 ~----~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~g  386 (422)
                      +    +.++..+.++.++++.....+ .+++++++++++.+.|+++++ ...+..+.++++.++.+.+..++++.|.++|
T Consensus       271 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g  349 (397)
T PRK06939        271 YLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAAGF-TLGPGEHPIIPVMLGDAKLAQEFADRLLEEG  349 (397)
T ss_pred             ccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC-CcCCCCCCEEEEEECCHHHHHHHHHHHHHCC
Confidence            2    223444555555554322223 778899999999999998764 3334455566666654446788999999889


Q ss_pred             cEEEeCCCC---CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          387 VMIRHYNNK---ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       387 I~v~~~~~~---~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      |.+.+...+   ...+++|++++...+.+++.+++++|
T Consensus       350 I~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L  387 (397)
T PRK06939        350 VYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAF  387 (397)
T ss_pred             ceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHH
Confidence            999864321   23468999986422235566666554

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=99.97  E-value=1.4e-29  Score=250.44  Aligned_cols=316  Identities=20%  Similarity=0.183  Sum_probs=230.8

Q ss_pred             CCeEEcCCC-CCCCCCCHHHHHHHhc-CC-CC-------CCCCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           95 EDIVKIDAN-ENPYGPPPEVREALGQ-LK-FP-------YIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        95 ~~~i~l~~~-~~~~~~~~~v~~al~~-~~-~~-------~~y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      ++.++++++ .++++++|.+++++.+ +. ++       ..|+.. ...+|++++++++|. ++.|++++|+ +++..++
T Consensus        46 ~~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~-~~~i~~~sG~-~a~~~~i  123 (410)
T PRK13392         46 RRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGK-ESALLFTSGY-VSNDAAL  123 (410)
T ss_pred             ceEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCC-CCEEEECcHH-HHHHHHH
Confidence            345666555 7899999999988865 21 21       123443 467999999999995 5677777765 5666677


Q ss_pred             HHhc--CCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhh---cCCCeEEEEeCCCCccCcCCCHH
Q 014594          164 RCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDE  238 (422)
Q Consensus       164 ~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~~e  238 (422)
                      ..+.  .+||.|++..+.|..+...++..|+++..++.+     |.+.+++.+.   .+++++|++++|+||||.+++.+
T Consensus       124 ~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~  198 (410)
T PRK13392        124 STLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHN-----DLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIE  198 (410)
T ss_pred             HHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHH
Confidence            6564  388988887777877767777889988777531     4455555443   25789999999999999999999


Q ss_pred             HHHHHHcC-CCeEEEccCCccccCC--Cchh-hhhhcCC-cEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCC-
Q 014594          239 DLLKILEM-PILVVLDEAYTEFSGL--ESRM-EWVKKHD-NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY-  312 (422)
Q Consensus       239 ~l~~i~~~-~~~li~Deay~~~~~~--~~~~-~~~~~~~-~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~-  312 (422)
                      ++.++++. ++++|+||+|....++  +... ...+..+ ..++++||||.||++|   ||+++++++++.+.+...+| 
T Consensus       199 ~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~~~~~~~l~~~~~~~~  275 (410)
T PRK13392        199 AICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAASADLIDFVRSFAPGFI  275 (410)
T ss_pred             HHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcCHHHHHHHHHhCcchh
Confidence            99999987 9999999999843322  1111 1111112 2488899999999888   99999999999888776543 


Q ss_pred             ---CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-hCCc
Q 014594          313 ---NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGV  387 (422)
Q Consensus       313 ---~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI  387 (422)
                         +.+++.+.++.++|+..+... .+++++++++++.+.|++++ +.+.++.++|+.+.++...+..++.+.|+ ++||
T Consensus       276 ~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~i~~~~~~~~~~~~~~L~~~~GI  354 (410)
T PRK13392        276 FTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNANG-IPVMPSPSHIVPVMVGDPTLCKAISDRLMSEHGI  354 (410)
T ss_pred             ccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCCE
Confidence               345677888888887544334 66788999999999999886 45556778887777653334568888886 7899


Q ss_pred             EEEeCCCC---CCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014594          388 MIRHYNNK---ELKGYVRVSV---GKPEHTDALMECLMHL  421 (422)
Q Consensus       388 ~v~~~~~~---~~~~~iRis~---~~~~~~~~l~~al~~l  421 (422)
                      .++++..+   ....++||++   .+.++++++.++|+++
T Consensus       355 ~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~  394 (410)
T PRK13392        355 YIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAI  394 (410)
T ss_pred             EEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            99976542   3347999997   5677788888887753

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=99.97  E-value=6.4e-29  Score=245.04  Aligned_cols=311  Identities=20%  Similarity=0.178  Sum_probs=226.5

Q ss_pred             eEEcCCCCCCCCCCHHHHHHHhc-CC-C----CCCCCCc-c----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594           97 IVKIDANENPYGPPPEVREALGQ-LK-F----PYIYPDP-E----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (422)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~-~~-~----~~~y~~~-~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~  165 (422)
                      .+.|+.+.... +++.+++++.+ +. .    ...|+.. +    ..++|+.+++++|.++++|++++|+++++..++.+
T Consensus        18 ~~yl~~~~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~   96 (397)
T TIGR01976        18 RVFFDNPAGTQ-IPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRA   96 (397)
T ss_pred             eEEecCCccCC-CCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHH
Confidence            68888765544 56778887765 21 1    1235432 2    46899999999999877899999999999888776


Q ss_pred             h---cCCCCEEEEcCCCchhH----HHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594          166 V---LDPGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (422)
Q Consensus       166 l---~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (422)
                      +   +++||+|++..|.|...    ...++..|++++.++.+. ++.+|++++++.++ +++++|++++|+||||.+.+.
T Consensus        97 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~-~~~~lv~i~~~~n~tG~~~~~  175 (397)
T TIGR01976        97 ISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLS-PRTRLVAVTAASNTLGSIVDL  175 (397)
T ss_pred             HHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcC-CCceEEEEeCCCCCCCccCCH
Confidence            5   68999999999988643    345677899999998654 57899999999997 689999999999999999999


Q ss_pred             HHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCC----
Q 014594          238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY----  312 (422)
Q Consensus       238 e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~----  312 (422)
                      +++.++++. |+++|+|+++....   . ...+...+..+++.|++|.+|   .|+||+++++++++.+......+    
T Consensus       176 ~~i~~~~~~~~~~~ivD~a~~~~~---~-~~~~~~~~~d~~~~s~~K~~g---~~~G~l~~~~~~~~~l~~~~~~~~~~~  248 (397)
T TIGR01976       176 AAITELVHAAGALVVVDAVHYAPH---G-LIDVQATGADFLTCSAYKFFG---PHMGILWGRPELLMNLPPYKLTFSYDT  248 (397)
T ss_pred             HHHHHHHHHcCCEEEEehhhhccc---c-CCCHHHcCCCEEEEechhhcC---CceEEEEEcHHHHhhCCCccccCccCC
Confidence            999999987 99999999985321   1 112223445577789999764   46899999999888765433221    


Q ss_pred             --------CCcHHH---HHHHHHHccCCh-------------HHH-HHHHHHHHHHHHHHHHccCCCCcccCC-----Cc
Q 014594          313 --------NVSVAA---EVAACAALQNPI-------------YLE-VKEALIKERERLFKLLKDVPFLNPYPS-----YS  362 (422)
Q Consensus       313 --------~~~~~~---~~aa~~~L~~~~-------------~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~-----~~  362 (422)
                              +.+...   ..++...+.+.+             +.+ .+++..+.++++.+.|++++.+.+.++     .+
T Consensus       249 ~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~  328 (397)
T TIGR01976       249 GPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARV  328 (397)
T ss_pred             CcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCC
Confidence                    223332   333334443221             244 677888899999999998875554332     56


Q ss_pred             eEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-----------CCCCeEEEEe---cChhhHHHHHHH
Q 014594          363 NFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-----------ELKGYVRVSV---GKPEHTDALMEC  417 (422)
Q Consensus       363 ~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~-----------~~~~~iRis~---~~~~~~~~l~~a  417 (422)
                      +++.+.++ +.+..++.++|.++||.++.+..+           ...+++|||+   .+.++++++.++
T Consensus       329 ~~~~~~~~-~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~  396 (397)
T TIGR01976       329 PTVSFTVH-GLPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEA  396 (397)
T ss_pred             ceEEEEeC-CcCHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHh
Confidence            78888775 457889999999999999976431           2347899999   455555555544

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=99.97  E-value=7.6e-29  Score=246.30  Aligned_cols=318  Identities=21%  Similarity=0.247  Sum_probs=236.6

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-C-C---CCC---CCCc----chHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-K-F---PYI---YPDP----ESRRLRAALAKDSGLE-SDHILVGCGADELIDL  161 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~---~~~---y~~~----~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~~  161 (422)
                      .+.+.|+.+... ++++.+.+++.+. . .   ...   |...    ...++|++++++++.+ +++|++|+|++++++.
T Consensus        31 ~~~iyLd~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~  109 (424)
T PLN02855         31 SKLVYLDNAATS-QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAINL  109 (424)
T ss_pred             CCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHH
Confidence            457999987665 5678888888652 1 1   011   1111    1458999999999985 5799999999999999


Q ss_pred             HHHH----hcCCCCEEEEcCCCch----hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCc
Q 014594          162 IMRC----VLDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (422)
Q Consensus       162 ~~~~----l~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~  233 (422)
                      +++.    .+++||+|+++.+.|+    .+...++..|++++.++.+.+..+|++++++.++ +++++|++++|+||||.
T Consensus       110 i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~-~~t~lv~i~~~~n~tG~  188 (424)
T PLN02855        110 VAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLS-EKTKLVATHHVSNVLGS  188 (424)
T ss_pred             HHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhc-cCceEEEEeCccccccc
Confidence            9886    3688999999999775    3555667789999999976666799999999997 68999999999999999


Q ss_pred             CCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc---
Q 014594          234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK---  309 (422)
Q Consensus       234 ~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~---  309 (422)
                      ++|.++|.++++. |+++|+|++|....   ..+ .+...+.++++.|++|.+|.+|  +||+++++++++.+....   
T Consensus       189 ~~~~~~I~~l~~~~g~~vivD~a~~~g~---~~~-~~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~p~~~g~  262 (424)
T PLN02855        189 ILPVEDIVHWAHAVGAKVLVDACQSVPH---MPV-DVQTLGADFLVASSHKMCGPTG--IGFLWGKSDLLESMPPFLGGG  262 (424)
T ss_pred             cCCHHHHHHHHHHcCCEEEEEhhhhcCC---cCC-CchhcCCCEEEeecccccCCCc--cEEEEEchhhhhcCCCEecCC
Confidence            9999999999987 99999999996321   111 1223344578999999777555  899999998877653220   


Q ss_pred             --------------------CCCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCccc-C------
Q 014594          310 --------------------QPYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPY-P------  359 (422)
Q Consensus       310 --------------------~~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p------  359 (422)
                                          ...+.+.....++.++++.  ....+ ++++..+.++++.+.|++++.+.+. +      
T Consensus       263 ~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~  342 (424)
T PLN02855        263 EMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGV  342 (424)
T ss_pred             CceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccccc
Confidence                                1123444555555555542  22344 7888899999999999887655543 1      


Q ss_pred             CCceEEEEEeCCCCCHHHHHHHHHhC-CcEEEeCCC--------CCCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014594          360 SYSNFILCEVTSGMDAKKLKDDLAKM-GVMIRHYNN--------KELKGYVRVSV---GKPEHTDALMECLMHL  421 (422)
Q Consensus       360 ~~~~f~~~~~~~~~~~~~~~~~L~~~-gI~v~~~~~--------~~~~~~iRis~---~~~~~~~~l~~al~~l  421 (422)
                      ..++++.+.++ +.+.+++.+.|.++ ||.++.+..        .+.++++|||+   .+.+|+++|.++|+.+
T Consensus       343 ~r~~~v~~~~~-~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~  415 (424)
T PLN02855        343 GRAALCAFNVE-GIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDT  415 (424)
T ss_pred             CcccEEEEEEC-CcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            12467888887 56788999999866 999997653        13357899998   6788888888888753

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=99.97  E-value=5.4e-29  Score=244.03  Aligned_cols=314  Identities=17%  Similarity=0.197  Sum_probs=222.4

Q ss_pred             CCCCeEEcCCC--CCCCCCC-HHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594           93 KPEDIVKIDAN--ENPYGPP-PEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (422)
Q Consensus        93 ~~~~~i~l~~~--~~~~~~~-~~v~~al~~-~~~----~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~  164 (422)
                      .+..+|||.++  .++++.. |.+.+++.+ +..    ...|+.+...+|+++++++++.  +++++++|+++++..+++
T Consensus        25 ~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~~~~~~sg~~a~~~a~~  102 (379)
T TIGR00707        25 NGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNLYYTEPQEELAEKLVEHSGA--DRVFFCNSGAEANEAALK  102 (379)
T ss_pred             CCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHHHHHH
Confidence            46778999886  4566554 888887765 221    2456666678999999999986  499999999999999988


Q ss_pred             Hh---cC----CCCEEEEcCCCchhHHHHHHHcCCEEEE----ecCCCCCCC----CHHHHHHHhhcCCCeEEEEeCCCC
Q 014594          165 CV---LD----PGDKIVDCPPTFTMYEFDAAVNGAAVVK----VPRKSDFSL----NVELIADAVEREKPKCIFLTSPNN  229 (422)
Q Consensus       165 ~l---~~----~gd~Vl~~~p~y~~~~~~~~~~g~~~~~----v~~~~~~~~----d~~~l~~~i~~~~~~~i~l~~p~N  229 (422)
                      .+   ..    ++|+|+++.|+|+.+...+...+.....    .+...++..    |++.+++.+. .++++|++++++|
T Consensus       103 ~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~p~~~  181 (379)
T TIGR00707       103 LARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAID-DETAAVIVEPIQG  181 (379)
T ss_pred             HHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhh-hCeeEEEEEcccc
Confidence            54   22    3799999999998877666655544321    222122222    8999999987 5789999987777


Q ss_pred             ccCcC-CCHHHHHHH---HcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChhhhccccccceeeecCHHHH
Q 014594          230 PDGSI-INDEDLLKI---LEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII  302 (422)
Q Consensus       230 PtG~~-~~~e~l~~i---~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~  302 (422)
                      |+|.. ++.+++.+|   ++. ++++|+||+|.+|...+...  ......++++   +|||.++ +|+|+||++++++++
T Consensus       182 ~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~---t~sK~~~-~G~riG~~~~~~~~~  257 (379)
T TIGR00707       182 EGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDII---TLAKGLG-GGVPIGATLAKEEVA  257 (379)
T ss_pred             CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEE---EEccccc-CCcccEEEEEcHHHH
Confidence            88864 566666555   444 99999999999886543221  1222233333   6899999 999999999999999


Q ss_pred             HHHHHh--cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCC---CcccCCCceEEEEEeCCCCCHHH
Q 014594          303 EYLWRA--KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPF---LNPYPSYSNFILCEVTSGMDAKK  377 (422)
Q Consensus       303 ~~l~~~--~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~p~~~~f~~~~~~~~~~~~~  377 (422)
                      +.+...  ...++.+++.+.++.++|+..+..+..++++++++++++.|++++.   ....+..|+|+|+++++  +..+
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~  335 (379)
T TIGR00707       258 EAFTPGDHGSTFGGNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGKNYPNKEVRGKGLMLGIELEA--PCKD  335 (379)
T ss_pred             hhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhCCCCccccCceEEEEEecC--cHHH
Confidence            988763  3457789999999998886322112556667777777777665421   12234578899999863  4788


Q ss_pred             HHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          378 LKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       378 ~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      +.+.|.++||.+++..    .+++||+++   +.++++++.++++
T Consensus       336 ~~~~l~~~Gv~v~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~  376 (379)
T TIGR00707       336 IVKKALEKGLLVNCAG----PKVLRFLPPLIITKEEIDEAVSALE  376 (379)
T ss_pred             HHHHHHHCCcEEeeCC----CCEEEEECCCcCCHHHHHHHHHHHH
Confidence            9999999999999864    489999964   4444444444444

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=99.97  E-value=4.7e-28  Score=234.68  Aligned_cols=315  Identities=21%  Similarity=0.160  Sum_probs=226.2

Q ss_pred             eEEcCCCCC-CCCCCHHHHHHHhc-CC-CCCC---C----C-CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594           97 IVKIDANEN-PYGPPPEVREALGQ-LK-FPYI---Y----P-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (422)
Q Consensus        97 ~i~l~~~~~-~~~~~~~v~~al~~-~~-~~~~---y----~-~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~  165 (422)
                      +++|+.++- ....+|++++++.+ +. +...   |    . .+...+++++++++++.+ + .++++++++++..++++
T Consensus         3 ~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~-~-~iv~~sg~~a~~~~~~~   80 (349)
T cd06454           3 VLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKE-A-ALVFSSGYAANDGVLST   80 (349)
T ss_pred             ceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCC-C-EEEeccHHHHHHHHHHH
Confidence            456665542 23447899998876 32 1111   2    1 223578999999999964 3 45556667788888888


Q ss_pred             hcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc----CCCeEEEEeCCCCccCcCCCHHHHH
Q 014594          166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER----EKPKCIFLTSPNNPDGSIINDEDLL  241 (422)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~~~~i~l~~p~NPtG~~~~~e~l~  241 (422)
                      ++++||.|+++.|+|..+...++..|++++.++     ..|++.+++.+++    .+++++++++++||||...+.++|.
T Consensus        81 ~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~  155 (349)
T cd06454          81 LAGKGDLIISDSLNHASIIDGIRLSGAKKRIFK-----HNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELV  155 (349)
T ss_pred             hcCCCCEEEEehhhhHHHHHHHHHcCCceEEec-----CCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHH
Confidence            899999999999999988888888999998876     2578888888864    4578888889999999999999999


Q ss_pred             HHHcC-CCeEEEccCCccccCC--Cchhhh--hhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC----C
Q 014594          242 KILEM-PILVVLDEAYTEFSGL--ESRMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----Y  312 (422)
Q Consensus       242 ~i~~~-~~~li~Deay~~~~~~--~~~~~~--~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~----~  312 (422)
                      ++++. |+++|+|++|......  +.....  ....+.+++++|+||.++.+|   ||+++++++++.+.....+    .
T Consensus       156 ~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~~~~~~~~~~~~~~~~~~~  232 (349)
T cd06454         156 DLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGSKELIDYLRSYARGFIFST  232 (349)
T ss_pred             HHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECCHHHHHHHHHhchhhhccC
Confidence            99997 9999999999753221  111111  123467899999999998655   9999999988887665433    2


Q ss_pred             CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEe
Q 014594          313 NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRH  391 (422)
Q Consensus       313 ~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~  391 (422)
                      +.++..+.++.++|+.....+ .+++++++++.+.+.|.+++.....+.++.+.++.++++.+.+++.+.|.++||.+++
T Consensus       233 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~  312 (349)
T cd06454         233 SLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKELGFPVGGSPSHIIPPLIGDDPAKAVAFSDALLERGIYVQA  312 (349)
T ss_pred             CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcEEEEeCCChHHHHHHHHHHHhCCceEEE
Confidence            456666777777775432234 7889999999999999887643333334444445444345678899999988999987


Q ss_pred             CCCC---CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          392 YNNK---ELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       392 ~~~~---~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      +...   ...+++||+++   +.++++++.++|+.+
T Consensus       313 ~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~  348 (349)
T cd06454         313 IRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV  348 (349)
T ss_pred             ecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence            5431   22579999986   455666666666543

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>PRK07179 hypothetical protein; Provisional

Probab=99.97  E-value=1.1e-27  Score=236.77  Aligned_cols=316  Identities=17%  Similarity=0.157  Sum_probs=231.9

Q ss_pred             CCCCeEEcCCC-CCCCCCCHHHHHHHhc-CC-C------CCCC--CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           93 KPEDIVKIDAN-ENPYGPPPEVREALGQ-LK-F------PYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        93 ~~~~~i~l~~~-~~~~~~~~~v~~al~~-~~-~------~~~y--~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      ++..+++++.+ .-.+...|++++++.+ +. +      ...|  +.+...+|++++++++|.  +.+++++|+++|+..
T Consensus        52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--~~~~~~~sG~~An~~  129 (407)
T PRK07179         52 PGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGF--ESCLLCQSGWAANVG  129 (407)
T ss_pred             CCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCC--CcEEEECCHHHHHHH
Confidence            45678899776 4566778999888765 21 1      1222  223467899999999996  457889999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~  241 (422)
                      ++++++.+||.|++..+.|......++..|++++.++     ..|++.+++.+++.++++|++++|+||||.+.|.+++.
T Consensus       130 ~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~  204 (407)
T PRK07179        130 LLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFR-----HNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIV  204 (407)
T ss_pred             HHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEec-----CCCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHH
Confidence            9999999999999999999877777777898887665     35899999999744688899999999999999999999


Q ss_pred             HHHcC-CCeEEEccCCccccCCCc---hhhhhhcC-CcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--C--
Q 014594          242 KILEM-PILVVLDEAYTEFSGLES---RMEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--Y--  312 (422)
Q Consensus       242 ~i~~~-~~~li~Deay~~~~~~~~---~~~~~~~~-~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~--  312 (422)
                      ++++. |+++|+||+|.....+..   .....+.. ..++++.|+||.+|   .|+||+++++++++.+.....+  +  
T Consensus       205 ~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~~~~~~~~~~~~~~~~~~~  281 (407)
T PRK07179        205 DIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCPRELAEYVPFVSYPAIFSS  281 (407)
T ss_pred             HHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeCHHHHHHHHHhCcCeeeCC
Confidence            99987 999999999985432221   12222211 23588899999886   2699999999988887655433  2  


Q ss_pred             CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEe
Q 014594          313 NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRH  391 (422)
Q Consensus       313 ~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~  391 (422)
                      +.++....++.++++.....+ .+++++++++++.+.|+++++ .+. +.++++++.++...+.+.+.+.|.++||.+..
T Consensus       282 t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~g~-~v~-~~~~i~~l~~~~~~~~~~~~~~L~~~GI~~~~  359 (407)
T PRK07179        282 TLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSELGY-NIR-SESQIIALETGSERNTEVLRDALEERNVFGAV  359 (407)
T ss_pred             CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC-CCC-CCCCEEEEEeCCHHHHHHHHHHHHHCCceEee
Confidence            333444444445554322223 778899999999999998863 443 56788888875333557788889999998654


Q ss_pred             CCC---CCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          392 YNN---KELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       392 ~~~---~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      ...   ....+++||+++   +.++++++.++|+.
T Consensus       360 ~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~  394 (407)
T PRK07179        360 FCAPATPKNRNLIRLSLNADLTASDLDRVLEVCRE  394 (407)
T ss_pred             ecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence            322   223589999998   56677777777654

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=99.97  E-value=3.1e-28  Score=238.18  Aligned_cols=279  Identities=19%  Similarity=0.179  Sum_probs=211.7

Q ss_pred             hHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHHHHHhcC---CCCEEEEcCCCchhH----HHHHHHcCCEEEEecCCCC
Q 014594          131 SRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLD---PGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPRKSD  202 (422)
Q Consensus       131 ~~~lr~~la~~~~~~-~~~i~~~~G~~~al~~~~~~l~~---~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~  202 (422)
                      ..++|+.++++++.+ ++++++++|+++++..++.++..   +||+|+++.++|...    ...++..|++++.++.+++
T Consensus        45 ~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~  124 (373)
T cd06453          45 YEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDD  124 (373)
T ss_pred             HHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCC
Confidence            457999999999987 78999999999999999999877   899999999999763    3455578999999998777


Q ss_pred             CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccC
Q 014594          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (422)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~  281 (422)
                      +.+|++++++.+. +++++|++++|+||||.+.+.+++.++++. |+++++|++|......   . .....+..+++.|+
T Consensus       125 ~~~d~~~l~~~l~-~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~---~-~~~~~~~d~~~~s~  199 (373)
T cd06453         125 GQLDLEALEKLLT-ERTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMP---V-DVQDLGCDFLAFSG  199 (373)
T ss_pred             CCcCHHHHHHHhc-CCceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCcee---e-eccccCCCEEEecc
Confidence            7899999999997 589999999999999999999999999987 9999999998743211   1 11122345777889


Q ss_pred             hhhhccccccceeeecCHHHHHHHHHhcCC-----------------------CCCcHHHHHHHH---HHccCChHHHHH
Q 014594          282 SKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-----------------------YNVSVAAEVAAC---AALQNPIYLEVK  335 (422)
Q Consensus       282 SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~-----------------------~~~~~~~~~aa~---~~L~~~~~~~~~  335 (422)
                      +|.++.  .++|++++++++++.+......                       .+++.....++.   ..+.+.++.+++
T Consensus       200 ~K~~~~--~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~  277 (373)
T cd06453         200 HKMLGP--TGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIA  277 (373)
T ss_pred             ccccCC--CCcEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHH
Confidence            998874  5689999999988876543210                       123333333333   334443432377


Q ss_pred             HHHHHHHHHHHHHHccCCCCcccC---CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEE
Q 014594          336 EALIKERERLFKLLKDVPFLNPYP---SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVS  404 (422)
Q Consensus       336 ~~~~~~~~~l~~~L~~~~~~~~~p---~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~--------~~~~~~iRis  404 (422)
                      ++.++.++++.+.|++++.+.+..   ..++++++.++ +.+.+++.+.|.++||.+..+..        .+.+++|||+
T Consensus       278 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis  356 (373)
T cd06453         278 AHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLE-GIHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRAS  356 (373)
T ss_pred             HHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEEC-CcCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEE
Confidence            888899999999999987655432   24667888886 46788999999999999986653        2246899999


Q ss_pred             ec---ChhhHHHHHHH
Q 014594          405 VG---KPEHTDALMEC  417 (422)
Q Consensus       405 ~~---~~~~~~~l~~a  417 (422)
                      ++   +.+++|++.++
T Consensus       357 ~~~~~t~~di~~~~~~  372 (373)
T cd06453         357 FGLYNTEEEIDALVEA  372 (373)
T ss_pred             ecCCCCHHHHHHHHhh
Confidence            98   44455554443

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=99.97  E-value=6.8e-28  Score=236.76  Aligned_cols=316  Identities=16%  Similarity=0.153  Sum_probs=224.8

Q ss_pred             CCCCeEEcCCCC-CCCCCCHHHHHHHhcC-C-CC---CCCC-Ccch----HHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           93 KPEDIVKIDANE-NPYGPPPEVREALGQL-K-FP---YIYP-DPES----RRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        93 ~~~~~i~l~~~~-~~~~~~~~v~~al~~~-~-~~---~~y~-~~~~----~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      .+++++||+.++ ..++++|.+.+++.+. . ..   ..|. ..|.    .++++.++++++. ++.+++++|+ +++..
T Consensus        31 ~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~-~~~i~~~sG~-~a~~~  108 (385)
T TIGR01825        31 NGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT-EAALVFQSGF-NTNQG  108 (385)
T ss_pred             CCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC-CcEEEECcHH-HHHHH
Confidence            467899999886 5677888888877652 1 21   2232 2243    4555555566674 4568888775 56667


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---CCCeEEEEeCCCCccCcCCCHH
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDE  238 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~e  238 (422)
                      ++.+++++||.|+++.|+|..+...+...|++++.++     .+|++++++.+.+   +++++|++++++||||.+.+.+
T Consensus       109 a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~  183 (385)
T TIGR01825       109 VLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-----HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLP  183 (385)
T ss_pred             HHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHH
Confidence            8888899999999999999988877778888887764     5788888887753   3688888889999999999999


Q ss_pred             HHHHHHcC-CCeEEEccCCccccCC--Cc-hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCC-
Q 014594          239 DLLKILEM-PILVVLDEAYTEFSGL--ES-RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY-  312 (422)
Q Consensus       239 ~l~~i~~~-~~~li~Deay~~~~~~--~~-~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~-  312 (422)
                      ++.++++. |+++|+||+|..+..+  +. .....+ ..+.+++++||||.++++|   ||+++++++++.+.....++ 
T Consensus       184 ~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~~~~~~~~~~~~~~~~~  260 (385)
T TIGR01825       184 EIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAGHKELIEYLKNRARPFL  260 (385)
T ss_pred             HHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCC---CEEecCHHHHHHHHHhCcccc
Confidence            99999987 9999999999876432  11 111111 2567899999999997665   99999999999887654432 


Q ss_pred             ---CCcHHHHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014594          313 ---NVSVAAEVAACAALQNP-IYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVM  388 (422)
Q Consensus       313 ---~~~~~~~~aa~~~L~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~  388 (422)
                         ..++..+.++.++++.. ++.+..+++.++++++.+.|++++. .+.++.++++++.++...+.+++++.|+++||.
T Consensus       261 ~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~  339 (385)
T TIGR01825       261 FSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKLGY-DTGGSETPITPVVIGDEKAAQEFSRRLFDEGIF  339 (385)
T ss_pred             ccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC-CCCCCCCCEEEEEECCHHHHHHHHHHHHHCCcE
Confidence               23556677777777532 2223666777889999999988763 444455667777665333567899999988999


Q ss_pred             EEeCCCC---CCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          389 IRHYNNK---ELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       389 v~~~~~~---~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      +++...+   ...+++|+++.   ++++.+++.++++
T Consensus       340 v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~  376 (385)
T TIGR01825       340 AQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYE  376 (385)
T ss_pred             EcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHH
Confidence            8643322   23478999875   3444444444443

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>PLN02822 serine palmitoyltransferase

Probab=99.97  E-value=1.2e-27  Score=239.40  Aligned_cols=319  Identities=17%  Similarity=0.165  Sum_probs=232.6

Q ss_pred             CCCCeEEcCCCC-CCCCCCHHHHHHHhc-C-CCCCC-------C-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           93 KPEDIVKIDANE-NPYGPPPEVREALGQ-L-KFPYI-------Y-PDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        93 ~~~~~i~l~~~~-~~~~~~~~v~~al~~-~-~~~~~-------y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      .++++++|.++. ..+..+|++.+++.+ + .++.+       | +.....+|+++|+++++. ++.|++++|++ ++..
T Consensus       107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~-~~~i~~s~G~~-a~~s  184 (481)
T PLN02822        107 NGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGT-PDSILYSYGLS-TIFS  184 (481)
T ss_pred             CCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCC-CCEEEECCHHH-HHHH
Confidence            457889999774 466778999888765 2 22222       3 233578999999999995 57899998887 5677


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhh---c-----CCC-eEEEEeCCCCccC
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---R-----EKP-KCIFLTSPNNPDG  232 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~---~-----~~~-~~i~l~~p~NPtG  232 (422)
                      ++.+++++||.|++....|..+.......|.+++.++.+     |.+.++..++   +     .++ ++|++++++|++|
T Consensus       185 ai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G  259 (481)
T PLN02822        185 VIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHN-----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSG  259 (481)
T ss_pred             HHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCC
Confidence            888899999999988887777777778889999998843     3344444332   1     234 6888889999999


Q ss_pred             cCCCHHHHHHHHcC-CCeEEEccCCccccCCCc---hhhhhh--cCCcEEEEccChhhhccccccceeeecCHHHHHHHH
Q 014594          233 SIINDEDLLKILEM-PILVVLDEAYTEFSGLES---RMEWVK--KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  306 (422)
Q Consensus       233 ~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~---~~~~~~--~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~  306 (422)
                      .+.+.+++.+|++. |+++|+||+|..+..+..   .....+  ..+.++++.||||.+|++|   ||+++++++++.+.
T Consensus       260 ~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~~~ii~~~~  336 (481)
T PLN02822        260 QIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGSARVVDHQR  336 (481)
T ss_pred             CccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcCHHHHHHHH
Confidence            99999999999987 999999999996554321   112221  1355789999999999888   99999999999887


Q ss_pred             HhcCC--CC--CcHHHHHHHHHHccCCh-HHHHHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCCCC-----C-
Q 014594          307 RAKQP--YN--VSVAAEVAACAALQNPI-YLEVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGM-----D-  374 (422)
Q Consensus       307 ~~~~~--~~--~~~~~~~aa~~~L~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~~-----~-  374 (422)
                      .....  |+  .++..+.++.++|+..+ +.+.+++++++++++.+.|+++.++.+ .++.++++++.+++..     + 
T Consensus       337 ~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~~~~~~~~  416 (481)
T PLN02822        337 LSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLEKSTGSAKEDL  416 (481)
T ss_pred             hcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeCCCcccccchH
Confidence            55443  43  34677788878886432 223888999999999999998743443 4678889999986320     1 


Q ss_pred             --HHHHHHHHH-hCCcEEEeCCC--CC---CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          375 --AKKLKDDLA-KMGVMIRHYNN--KE---LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       375 --~~~~~~~L~-~~gI~v~~~~~--~~---~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                        ..++++.|+ ++||.+.++..  .+   .+.++||+++...+.++|.+++++|
T Consensus       417 ~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l  471 (481)
T PLN02822        417 SLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESL  471 (481)
T ss_pred             HHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHH
Confidence              357888987 88999997643  11   2457999987433335555555544

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=99.97  E-value=1e-27  Score=232.88  Aligned_cols=308  Identities=13%  Similarity=0.110  Sum_probs=229.2

Q ss_pred             CCCCCCCHHHHHHHhcCCCCCC---CCCcchHHHHHHHHHHcCCCCC--CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 014594          104 ENPYGPPPEVREALGQLKFPYI---YPDPESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCPP  178 (422)
Q Consensus       104 ~~~~~~~~~v~~al~~~~~~~~---y~~~~~~~lr~~la~~~~~~~~--~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p  178 (422)
                      ..|..+++.+++++.. ...++   |+ ....++|+.+++++|++++  .|++++|+++++..++..++.++|+|++..+
T Consensus         5 p~p~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~   82 (355)
T TIGR03301         5 PGPLSTSATVRDAMLV-DWCHWDSEFN-DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLIN   82 (355)
T ss_pred             CCCCCCCHHHHHHhhh-hccCCCHHHH-HHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECC
Confidence            3466778899999986 22222   32 2367899999999999765  5778999999999999999988888665554


Q ss_pred             -Cchh-HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEcc
Q 014594          179 -TFTM-YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDE  254 (422)
Q Consensus       179 -~y~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~De  254 (422)
                       .|+. +...++..|.+++.++.++++.+|++++++.+++ .+++++++++++||||...+.++|.++++. ++++|+|+
T Consensus        83 ~~~~~~~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~  162 (355)
T TIGR03301        83 GAYGERLAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDA  162 (355)
T ss_pred             CchhhHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEe
Confidence             5543 5667788999999999877789999999999864 356788888999999999999999999987 99999998


Q ss_pred             CCccccCCCchhhhhhcCCcEEEEccChhhh-ccccccceeeecCHHHHHHHHHh-------------------cCCCCC
Q 014594          255 AYTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRA-------------------KQPYNV  314 (422)
Q Consensus       255 ay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~r~G~i~~~~~~~~~l~~~-------------------~~~~~~  314 (422)
                      +++.... +   ..+...+..+++.|++|.+ |++|  +||+++++++++.+...                   ...+++
T Consensus       163 ~~s~g~~-~---~~~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~  236 (355)
T TIGR03301       163 MSSFGAI-P---IDIEELDVDALIASANKCLEGVPG--FGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTP  236 (355)
T ss_pred             ccccCCc-c---cchhhcCccEEEecCCcccccCCc--eeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCC
Confidence            7764321 1   1222345668899999976 4455  79999999998876521                   123566


Q ss_pred             cHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC---CceEEEEEeCCC--CCHHHHHHHHHhC
Q 014594          315 SVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPS---YSNFILCEVTSG--MDAKKLKDDLAKM  385 (422)
Q Consensus       315 ~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~~f~~~~~~~~--~~~~~~~~~L~~~  385 (422)
                      +...+.++.++++   +.++.+ .+++++++++++.+.|+++++..+.+.   .+.++++++|..  .+.+++.+.|.++
T Consensus       237 ~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  316 (355)
T TIGR03301       237 PTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPIIVSFLYPDDPDFDFDDFYQELKER  316 (355)
T ss_pred             cHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcEEEEECCCCCcchHHHHHHHHHHC
Confidence            7777666655554   233244 778889999999999998864323232   244678888742  4567899999999


Q ss_pred             CcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          386 GVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       386 gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      ||.+.++.... .+++||++.   +.++++++.++|+.
T Consensus       317 gi~i~~~~~~~-~~~iRis~~~~~~~~~i~~~~~~l~~  353 (355)
T TIGR03301       317 GFVIYPGKLTL-ADTFRIGTIGEIDAADIERLLEAIKD  353 (355)
T ss_pred             CEEEECCcccc-ccEEEEecCCCCCHHHHHHHHHHHHh
Confidence            99999876432 379999974   56667777777654

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>PRK07049 methionine gamma-lyase; Validated

Probab=99.97  E-value=4.6e-28  Score=238.87  Aligned_cols=218  Identities=17%  Similarity=0.202  Sum_probs=179.5

Q ss_pred             CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEecC
Q 014594          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPR  199 (422)
Q Consensus       124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~  199 (422)
                      .+|+++....|+++|+++.+.  +++++++|+++++..++.+++++||.|+++.|+|..+...+    ...|++++.++.
T Consensus        78 ~R~~~Pt~~~Le~~lA~leg~--~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~  155 (427)
T PRK07049         78 SRFNHPNSEIVEDRLAVYEGA--ESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFAD  155 (427)
T ss_pred             cCCCCcCHHHHHHHHHHHhCC--CcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeC
Confidence            668889899999999999984  47888899999999999999999999999999999886653    457999887762


Q ss_pred             CCCCCCCHHHHHHHhh----cCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-------CCeEEEccCCccccCCCchhhh
Q 014594          200 KSDFSLNVELIADAVE----REKPKCIFLTSPNNPDGSIINDEDLLKILEM-------PILVVLDEAYTEFSGLESRMEW  268 (422)
Q Consensus       200 ~~~~~~d~~~l~~~i~----~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-------~~~li~Deay~~~~~~~~~~~~  268 (422)
                          ..|++.+++.+.    ++++|+|++++|+||||.+++.+++.+|++.       ++++|+||+|..+.... ..  
T Consensus       156 ----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~-pl--  228 (427)
T PRK07049        156 ----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQK-PL--  228 (427)
T ss_pred             ----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCC-cc--
Confidence                356777776663    3579999999999999999999999999875       68999999987543211 11  


Q ss_pred             hhcCCcEEEEccChhhhc-cccccceeeecCHHHHHHHHHhcCCCC--CcHHHHHHHHHHccCChHHH-HHHHHHHHHHH
Q 014594          269 VKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAKQPYN--VSVAAEVAACAALQNPIYLE-VKEALIKERER  344 (422)
Q Consensus       269 ~~~~~~~i~~~S~SK~~~-~~G~r~G~i~~~~~~~~~l~~~~~~~~--~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~  344 (422)
                        ..+.++++.|+||.++ .+|+|+||+++++++++.+...+..++  ++++.+.++...|+   .+. +.++..++++.
T Consensus       229 --~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~---tl~~R~~~~~~~a~~  303 (427)
T PRK07049        229 --EHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSAIGTQLDPHSCWMLGRSLE---TLVLRMERANRNARA  303 (427)
T ss_pred             --ccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCC---hHHHHHHHHHHHHHH
Confidence              3356799999999998 699999999999999999887776654  78888888887775   344 66777999999


Q ss_pred             HHHHHccCCCC
Q 014594          345 LFKLLKDVPFL  355 (422)
Q Consensus       345 l~~~L~~~~~~  355 (422)
                      +.+.|++++.+
T Consensus       304 la~~L~~~p~V  314 (427)
T PRK07049        304 VAEFLRDHPKV  314 (427)
T ss_pred             HHHHHHhCCCc
Confidence            99999988654

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=99.97  E-value=2.5e-28  Score=240.70  Aligned_cols=317  Identities=18%  Similarity=0.202  Sum_probs=218.7

Q ss_pred             CCCCCeEEcCCC--CCCCCC-CHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           92 RKPEDIVKIDAN--ENPYGP-PPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~~~----~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      .+++++||+..+  .+.++. +|.+.+++.+ +..    ...|+.+...++.+.++++.+.  +++++++|++++++.++
T Consensus        36 ~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~--~~v~~~~gg~eA~~~al  113 (396)
T PRK02627         36 DDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNLYYIEPQEELAEKLVELSGM--DKVFFCNSGAEANEAAI  113 (396)
T ss_pred             CCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhcCC--CEEEECCCcHHHHHHHH
Confidence            457789999887  345665 5888888876 221    1345555566788888887664  79999999999999999


Q ss_pred             HHhcCCC-------CEEEEcCCCchhHHHHHHHcCCEE-EE---ecCCCCC----CCCHHHHHHHhhcCCCeEEEEeCCC
Q 014594          164 RCVLDPG-------DKIVDCPPTFTMYEFDAAVNGAAV-VK---VPRKSDF----SLNVELIADAVEREKPKCIFLTSPN  228 (422)
Q Consensus       164 ~~l~~~g-------d~Vl~~~p~y~~~~~~~~~~g~~~-~~---v~~~~~~----~~d~~~l~~~i~~~~~~~i~l~~p~  228 (422)
                      +.+...+       ++|+...++|+.+...+...+... ..   .+...++    ..|++++++.+. +++++|++++++
T Consensus       114 ~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~vii~p~~  192 (396)
T PRK02627        114 KLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAIT-DKTAAVMLEPIQ  192 (396)
T ss_pred             HHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcC-CCeEEEEEeccc
Confidence            9665433       679999999987765554433222 11   1111221    228999999996 689999999999


Q ss_pred             CccC-cCCCHHHHHHHHcC----CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceeeecCHHH
Q 014594          229 NPDG-SIINDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (422)
Q Consensus       229 NPtG-~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~  301 (422)
                      ||+| .+++.+.+++|.+.    |+++|+||+|.+|...+..  .......++   +.+|||.++ +|+|+||+++++++
T Consensus       193 ~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pd---i~t~sK~~~-~G~rig~~~~~~~~  268 (396)
T PRK02627        193 GEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPD---IMTLAKGLG-GGVPIGAVLAKEKV  268 (396)
T ss_pred             CCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCC---EEEEcchhh-CCcccEEEEEcHHH
Confidence            9999 67787766666553    9999999999988644321  112222233   336999999 99999999999999


Q ss_pred             HHHHHHh--cCCCCCcHHHHHHHHHHccCC---hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCH
Q 014594          302 IEYLWRA--KQPYNVSVAAEVAACAALQNP---IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDA  375 (422)
Q Consensus       302 ~~~l~~~--~~~~~~~~~~~~aa~~~L~~~---~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~  375 (422)
                      ++.+...  ...++.+++.+.++.++|+..   ++.+ .++.....++.+.+.+.+++.+...+..|.|+|++++  .+.
T Consensus       269 ~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~~--~~~  346 (396)
T PRK02627        269 ADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIELD--RPA  346 (396)
T ss_pred             HhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCeeeeccCcEEEEEEec--CcH
Confidence            8887642  345788999999999998742   3333 3333344444444444444433334567889999983  468


Q ss_pred             HHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          376 KKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       376 ~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .++.+.|.++||.+.++.    .+++||+++...+.+++++++++|
T Consensus       347 ~~~~~~l~~~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~~~~l  388 (396)
T PRK02627        347 AEIVKKALEKGLLINVTG----DNVLRLLPPLIISKEEIDEAVDRL  388 (396)
T ss_pred             HHHHHHHHHCCeEEeecC----CCEEEEECCcccCHHHHHHHHHHH
Confidence            899999998999999865    478999865222234455555443

>PLN02409 serine--glyoxylate aminotransaminase

Probab=99.96  E-value=2.4e-27  Score=233.37  Aligned_cols=300  Identities=16%  Similarity=0.065  Sum_probs=227.1

Q ss_pred             CCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCCCC-CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 014594          103 NENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDPGDKIVDCPPT  179 (422)
Q Consensus       103 ~~~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~~~-~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~  179 (422)
                      +..|...+++|++++......++.+..  -..++++.+++++|.+. +.+++++|++++++.++..++++||+|++.++.
T Consensus        14 ~pGP~~~~~~V~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~   93 (401)
T PLN02409         14 VPGPVNIPERVLRAMNRPNEDHRSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIG   93 (401)
T ss_pred             cCCCCCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCC
Confidence            345667789999999874332332322  25678888888899865 468999999999999999999999999999998


Q ss_pred             chhH--HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---CCCeEEEEeCCCCccCcCCCHHHHHHH--HcC-CCeEE
Q 014594          180 FTMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKI--LEM-PILVV  251 (422)
Q Consensus       180 y~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~e~l~~i--~~~-~~~li  251 (422)
                      |...  ...++..|++++.++.+++..+|++++++.+++   +++++|+++|++||||.++|.+++.++  ++. |+++|
T Consensus        94 ~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~v  173 (401)
T PLN02409         94 QFSLLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLL  173 (401)
T ss_pred             chhHHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEE
Confidence            8644  466777899999999776667899999999974   379999999999999999999999999  876 99999


Q ss_pred             EccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--------------------C
Q 014594          252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--------------------P  311 (422)
Q Consensus       252 ~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--------------------~  311 (422)
                      +|++++...    ..-.+...+.++++.|.+|.++.| .++||++++++.++++.....                    +
T Consensus       174 vD~v~s~g~----~~id~~~~~~D~~~~s~~K~l~~P-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  248 (401)
T PLN02409        174 VDGVSSIGA----LDFRMDEWGVDVALTGSQKALSLP-TGLGIVCASPKALEASKTAKSPRVFFDWADYLKFYKLGTYWP  248 (401)
T ss_pred             EEcccccCC----ccccccccCccEEEEcCccccCcC-CCcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCC
Confidence            999987321    111122345558888889988643 369999999998887653210                    3


Q ss_pred             CCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC---c-eEEEEEeCCCCCHHHHHHHHH-
Q 014594          312 YNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY---S-NFILCEVTSGMDAKKLKDDLA-  383 (422)
Q Consensus       312 ~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~---~-~f~~~~~~~~~~~~~~~~~L~-  383 (422)
                      ++++...+.++.++++.  ....+ +++++++.++++.+.|++++.....+..   . ..+++.+|++.+++++.+.|. 
T Consensus       249 ~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p~~~~~~~l~~~l~~  328 (401)
T PLN02409        249 YTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVPEGIDSAEIVKNAWK  328 (401)
T ss_pred             CCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCCCCCCHHHHHHHHHH
Confidence            35666666777776654  23345 8889999999999999888643222221   2 345688887888899988886 


Q ss_pred             hCCcEEEeCCCCCCCCeEEEEecC
Q 014594          384 KMGVMIRHYNNKELKGYVRVSVGK  407 (422)
Q Consensus       384 ~~gI~v~~~~~~~~~~~iRis~~~  407 (422)
                      ++||.+..|.....+..|||+...
T Consensus       329 ~~~i~i~~G~~~~~~~~~Rig~~g  352 (401)
T PLN02409        329 KYNLSLGLGLNKVAGKVFRIGHLG  352 (401)
T ss_pred             hCCEEEEcCCCcccCCEEEEcCCC
Confidence            889999988765457899999754

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=99.96  E-value=2.1e-27  Score=231.90  Aligned_cols=310  Identities=13%  Similarity=0.088  Sum_probs=227.5

Q ss_pred             CCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCCCC--CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 014594          103 NENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLES--DHILVGCGADELIDLIMRCVLDPGDKIVDCPP  178 (422)
Q Consensus       103 ~~~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~~~--~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p  178 (422)
                      ...|.++++.+++++..... ++.+..  ...++|+.+++++|.++  +.|++++|+++++..++.++..+||.|++..+
T Consensus        10 ~pgP~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~   88 (368)
T PRK13479         10 TPGPLTTSRTVREAMLRDWG-SWDDDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDN   88 (368)
T ss_pred             cCCCCCCCHHHHHHhCCCCC-CCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeC
Confidence            34677778999999876322 222222  46789999999999864  45889999999999999999999999999888


Q ss_pred             CchhH--HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEcc
Q 014594          179 TFTMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDE  254 (422)
Q Consensus       179 ~y~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~De  254 (422)
                      +|...  ...++..|++++.++.++++.+|++++++.+++ .++++++++||+||||...|.+++.++++. |+++|+|+
T Consensus        89 ~~~~~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa  168 (368)
T PRK13479         89 GAYGARIAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDA  168 (368)
T ss_pred             CchHHHHHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEc
Confidence            77554  467788999999999876778999999999863 357789999999999999999999999987 99999996


Q ss_pred             CCccccCCCchhhhhhcCCcEEEEccChhhh-ccccccceeeecCHHHHHHHHHhcCC-------------------CCC
Q 014594          255 AYTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRAKQP-------------------YNV  314 (422)
Q Consensus       255 ay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~r~G~i~~~~~~~~~l~~~~~~-------------------~~~  314 (422)
                      ++ .+...+  . .+...+..+++.|++|.+ |.+|  +||+++++++++.+.....+                   +++
T Consensus       169 ~~-~~g~~~--~-~~~~~~~d~~v~s~~K~l~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~  242 (368)
T PRK13479        169 MS-SFGAIP--I-DIAELGIDALISSANKCIEGVPG--FGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTP  242 (368)
T ss_pred             cc-ccCCcc--c-cccccCceEEEecCccccccCCC--ceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCC
Confidence            55 443221  1 122234457778999964 6677  69999999988876543221                   355


Q ss_pred             cHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC--Cce-EEEEEeCC--CCCHHHHHHHHHhC
Q 014594          315 SVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPS--YSN-FILCEVTS--GMDAKKLKDDLAKM  385 (422)
Q Consensus       315 ~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~--~~~-f~~~~~~~--~~~~~~~~~~L~~~  385 (422)
                      +...+.++.++++   +.++.+ .++++.++++++.+.|+++++....++  ..+ .+.+.++.  +.+.+++.+.|.++
T Consensus       243 ~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  322 (368)
T PRK13479        243 PTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPIIVTFHAPADPAYDFKEFYERLKEQ  322 (368)
T ss_pred             cHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCceEEEEECCCCCCcCHHHHHHHHHHC
Confidence            5555445544443   334455 778999999999999999875433222  122 23344443  25788999999999


Q ss_pred             CcEEEeCCCCCCCCeEEEEe-c--ChhhHHHHHHHHhh
Q 014594          386 GVMIRHYNNKELKGYVRVSV-G--KPEHTDALMECLMH  420 (422)
Q Consensus       386 gI~v~~~~~~~~~~~iRis~-~--~~~~~~~l~~al~~  420 (422)
                      ||.++++... ..+++||+. +  +.++++.+.++|++
T Consensus       323 gi~v~~g~~~-~~~~iRis~~~~~t~edi~~~l~~L~~  359 (368)
T PRK13479        323 GFVIYPGKLT-QVDTFRIGCIGDVDAADIRRLVAAIAE  359 (368)
T ss_pred             CEEEecCCCC-CCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence            9999887532 246899985 6  66777777777764

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=99.96  E-value=9.8e-28  Score=236.51  Aligned_cols=314  Identities=18%  Similarity=0.191  Sum_probs=227.9

Q ss_pred             CCCCCeEEcCCC--CCCCCC-CHHHHHHHhc-CC---C-CCCCCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHH
Q 014594           92 RKPEDIVKIDAN--ENPYGP-PPEVREALGQ-LK---F-PYIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLI  162 (422)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~~---~-~~~y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~~~  162 (422)
                      .++++++||.++  .+.++. +|++.+++.+ +.   . ...|+.+...+|.+.++++++.+ ++++++++|+++++..+
T Consensus        40 ~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~a  119 (398)
T PRK03244         40 VDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAA  119 (398)
T ss_pred             CCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCCHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHH
Confidence            457789999886  456666 6888888775 22   1 23576666678999999998853 47999999999999999


Q ss_pred             HHHhcCCC-CEEEEcCCCchhHHHHHHH-cCCE------------EEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCC
Q 014594          163 MRCVLDPG-DKIVDCPPTFTMYEFDAAV-NGAA------------VVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN  228 (422)
Q Consensus       163 ~~~l~~~g-d~Vl~~~p~y~~~~~~~~~-~g~~------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~  228 (422)
                      ++....+| +.|+...++|+.+...+.. .|..            +..+|     ..|++.+++.+. +++++|++++++
T Consensus       120 l~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~~~-~~~~aviiep~~  193 (398)
T PRK03244        120 FKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVP-----YGDVDALAAAVD-DDTAAVFLEPIQ  193 (398)
T ss_pred             HHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeC-----CCCHHHHHHhhc-CCeEEEEEeccc
Confidence            99766666 5677778899866544432 2221            22222     137899999886 689999999999


Q ss_pred             CccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChhhhccccccceeeecCHHH
Q 014594          229 NPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (422)
Q Consensus       229 NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~  301 (422)
                      ||+|.+++    .+++.++|+. |+++|+||+|..|...+...  ......+++   .+|||.++ +|+|+||+++++++
T Consensus       194 ~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi---~t~sK~l~-~G~~ig~~~~~~~~  269 (398)
T PRK03244        194 GEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDV---VTLAKGLG-GGLPIGACLAFGPA  269 (398)
T ss_pred             CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCCE---EEEchhhh-CCcccEEEEEcHHH
Confidence            99999998    5677778876 99999999998876544322  111222333   37899998 89999999999998


Q ss_pred             HHHHHH--hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCC--CcccCCCceEEEEEeCCCCCHHH
Q 014594          302 IEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPF--LNPYPSYSNFILCEVTSGMDAKK  377 (422)
Q Consensus       302 ~~~l~~--~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~p~~~~f~~~~~~~~~~~~~  377 (422)
                      ++.+..  ....|+.+++.+.++.++|+.-+..+..++++++++++.+.|++++.  +......|+++|++++. ..+..
T Consensus       270 ~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g~g~~~~i~~~~-~~~~~  348 (398)
T PRK03244        270 ADLLTPGLHGSTFGGNPVACAAALAVLDTIASEGLLENAERLGEQLRAGIEALGHPLVDHVRGRGLLLGIVLTA-PVAKA  348 (398)
T ss_pred             HhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhcCCCceeeEeeccEEEEEEEec-cHHHH
Confidence            887764  23357889999999999976311111556777778888899988543  22234678999999963 35678


Q ss_pred             HHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          378 LKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       378 ~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      +.+.|.++||.+++..    .+++||++.   +.++++++.+++++
T Consensus       349 ~~~~l~~~Gv~~~~~~----~~~iR~~p~~~~t~~~i~~~~~~l~~  390 (398)
T PRK03244        349 VEAAAREAGFLVNAVA----PDVIRLAPPLIITDAQVDAFVAALPA  390 (398)
T ss_pred             HHHHHHHCCeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHHH
Confidence            9999999999998743    478999954   45555555555543

>PLN02483 serine palmitoyltransferase

Probab=99.96  E-value=2.3e-27  Score=237.76  Aligned_cols=318  Identities=17%  Similarity=0.165  Sum_probs=223.0

Q ss_pred             CCCeEEcCCCC-CCC-----CCCHHHHHHHhcCCC---C--CCCC-CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           94 PEDIVKIDANE-NPY-----GPPPEVREALGQLKF---P--YIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        94 ~~~~i~l~~~~-~~~-----~~~~~v~~al~~~~~---~--~~y~-~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      ..+.++|++++ -.+     .+.+.+.+++.+...   +  ..|+ .....++++++|+++| .++.|++++|.... ..
T Consensus        99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-~~~ai~~~~G~~an-~~  176 (489)
T PLN02483         99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-KPAAIVFGMGYATN-ST  176 (489)
T ss_pred             CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-CCcEEEECCHHHHH-HH
Confidence            46678887753 122     234677778776431   1  2254 4568899999999999 46678887775544 46


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc------CCC-----eEEEEe-CCCC
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER------EKP-----KCIFLT-SPNN  229 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------~~~-----~~i~l~-~p~N  229 (422)
                      ++.+++++||.|++++|+|..+...++..|++++.++.+     |++.+++.+++      +++     ++++++ +..|
T Consensus       177 ~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s  251 (489)
T PLN02483        177 IIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYS  251 (489)
T ss_pred             HHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCC
Confidence            777799999999999999999999999999999999843     45666555431      222     555555 5679


Q ss_pred             ccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCC---chhhhh--hcCCcEEEEccChhhhccccccceeeecCHHHHH
Q 014594          230 PDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE---SRMEWV--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (422)
Q Consensus       230 PtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~---~~~~~~--~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~  303 (422)
                      ++|.+.+.+++.++++. ++++|+||+|.....+.   ......  ...+.+++++||||++|+.|   ||+++++++++
T Consensus       252 ~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G---G~i~~~~~li~  328 (489)
T PLN02483        252 MEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG---GYIAGSKELIQ  328 (489)
T ss_pred             CCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc---eEEEcCHHHHH
Confidence            99999999999999997 99999999998433221   112222  22466899999999998777   99999999999


Q ss_pred             HHHHhcCC--C--CCcHHHHHHHHHHcc-----C-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCC
Q 014594          304 YLWRAKQP--Y--NVSVAAEVAACAALQ-----N-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG  372 (422)
Q Consensus       304 ~l~~~~~~--~--~~~~~~~~aa~~~L~-----~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~  372 (422)
                      .+......  +  +.++....++.++|+     + .++.. ++++++++++++.+.|+++++....+.++..+++.+...
T Consensus       329 ~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~~~~~sp~~~l~l~~~  408 (489)
T PLN02483        329 YLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNP  408 (489)
T ss_pred             HHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCEEEEEECCH
Confidence            99876432  2  234444434445442     2 13334 778899999999999999864323345566777776533


Q ss_pred             CCHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          373 MDAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       373 ~~~~~~~~~L~~~gI~v~~~~~---~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .+..++.+.|+++||.+.+...   +...+.+||+++...+.++|++++++|
T Consensus       409 ~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L  460 (489)
T PLN02483        409 AKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVI  460 (489)
T ss_pred             HHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            4567899999999999996332   233578999997533335566655554

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=99.96  E-value=4.8e-27  Score=230.35  Aligned_cols=318  Identities=19%  Similarity=0.182  Sum_probs=230.3

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhcCCCC--------CCCC---CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQLKFP--------YIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~~~~--------~~y~---~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      ..++|+|+--.---++++.+++++.+....        +.+.   .+...++|+.+++++|.+  ++++++|+++++..+
T Consensus        17 ~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~--~~~~~~g~t~a~~~a   94 (387)
T PRK09331         17 EEEFINLDPIQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMD--EARVTHGAREGKFAV   94 (387)
T ss_pred             cccccccChhhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHH
Confidence            356788876555556678888988763211        1111   224689999999999974  688899999999999


Q ss_pred             HHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhc------CCCeEEEEeCCCCccCcC
Q 014594          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER------EKPKCIFLTSPNNPDGSI  234 (422)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~------~~~~~i~l~~p~NPtG~~  234 (422)
                      +.+++++||+|+++.++|......++..|++++.++.  ++++.+|++.+++.+++      +++++|++++|+||||.+
T Consensus        95 l~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~  174 (387)
T PRK09331         95 MHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNL  174 (387)
T ss_pred             HHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccc
Confidence            9999999999999999987766677889999999997  66788999999999864      278999999999999999


Q ss_pred             CCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCC
Q 014594          235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN  313 (422)
Q Consensus       235 ~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~  313 (422)
                      .+.+++.++++. |+++|+|++|+.......    ....+..+++.|++|.++ ++.|+||+++++++++.+.+...+|.
T Consensus       175 ~~l~~I~~la~~~g~~livD~a~~~g~~~~~----~~~~g~D~~~~s~~K~l~-~~~~~G~l~~~~~~i~~~~~~~~~~~  249 (387)
T PRK09331        175 ADAKKVAKVAHEYGIPFLLNGAYTVGRMPVD----GKKLGADFIVGSGHKSMA-ASAPSGVLATTEEYADKVFRTSRKFG  249 (387)
T ss_pred             ccHHHHHHHHHHcCCEEEEECCcccCCcCCC----HHHcCCCEEEeeCccccc-CCCCEEEEEECHHHHhhcccccCCCc
Confidence            999999999987 999999999984321111    112345688999999987 55689999999999888765433221


Q ss_pred             ----------CcHHHHHHHHHHccC-ChHHHHHHHHHHHHHHHHHHHccCCCCccc---CCCceEEEEEeCC--------
Q 014594          314 ----------VSVAAEVAACAALQN-PIYLEVKEALIKERERLFKLLKDVPFLNPY---PSYSNFILCEVTS--------  371 (422)
Q Consensus       314 ----------~~~~~~~aa~~~L~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---p~~~~f~~~~~~~--------  371 (422)
                                .+.....++.++++. .+..+..++..++.+++++.|++++++.+.   ++..+++.++.|.        
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~  329 (387)
T PRK09331        250 VKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDEIAKKH  329 (387)
T ss_pred             ccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhHHhhhc
Confidence                      211222323333321 122234455667788999999999555554   4456677777651        


Q ss_pred             CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe-c-ChhhHHHHHHHHhhh
Q 014594          372 GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV-G-KPEHTDALMECLMHL  421 (422)
Q Consensus       372 ~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~-~-~~~~~~~l~~al~~l  421 (422)
                      ..+..++.+.|.++||...+.   +....+|+.. + +.++++++.++|+.+
T Consensus       330 ~~~~~~~~~~L~~~gI~~~~~---~~~~i~ri~~~g~t~~di~~l~~aL~~i  378 (387)
T PRK09331        330 KRRGFFLYEELKKRGIHGIKP---GATKEFKLSTYGLTWEQVEYVADAFKEI  378 (387)
T ss_pred             cccchhHHHHHHHcCceEEcc---CCceEEEEEeccCCHHHHHHHHHHHHHH
Confidence            123356889999999984332   2356788876 4 566777788877654

>PRK09064 5-aminolevulinate synthase; Validated

Probab=99.96  E-value=4.8e-27  Score=232.28  Aligned_cols=317  Identities=19%  Similarity=0.176  Sum_probs=228.4

Q ss_pred             CCCeEEcCCC-CCCCCCCHHHHHHHhc-CC-CCC-------CC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           94 PEDIVKIDAN-ENPYGPPPEVREALGQ-LK-FPY-------IY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        94 ~~~~i~l~~~-~~~~~~~~~v~~al~~-~~-~~~-------~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      ++++++|+++ .-.++++|++.+++.+ +. ++.       .| +.+...+|++++++++|. ++.+++++| .++...+
T Consensus        45 ~~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~-~~~~~~~sG-~~an~~a  122 (407)
T PRK09064         45 EREVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGK-EAALVFTSG-YVSNDAT  122 (407)
T ss_pred             CceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCC-CcEEEECcH-HHHHHHH
Confidence            3568899776 4677889999988875 21 111       13 344578999999999994 455555555 5676666


Q ss_pred             HHHhcC--CCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---CCCeEEEEeCCCCccCcCCCH
Q 014594          163 MRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIIND  237 (422)
Q Consensus       163 ~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~  237 (422)
                      +..++.  +++.|+.....|......++..|+++..++.     .|++.+++.++.   +++++|++++++||+|.+.+.
T Consensus       123 i~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l  197 (407)
T PRK09064        123 LSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-----NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAPI  197 (407)
T ss_pred             HHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-----CCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccCH
Confidence            676554  7776766666666665666777887766652     377888877752   468999999999999999999


Q ss_pred             HHHHHHHcC-CCeEEEccCCcc--ccCCCchh-hhhhc-CCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCC
Q 014594          238 EDLLKILEM-PILVVLDEAYTE--FSGLESRM-EWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY  312 (422)
Q Consensus       238 e~l~~i~~~-~~~li~Deay~~--~~~~~~~~-~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~  312 (422)
                      +++.++++. |+++|+||+|..  +...+... ...+. .+.+++++||||+||++|   ||+++++++++.+.....++
T Consensus       198 ~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~~~~~~~l~~~~~~~  274 (407)
T PRK09064        198 AEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGSAALVDAVRSYAPGF  274 (407)
T ss_pred             HHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEecCHHHHHHHHHhCccc
Confidence            999999987 999999999973  32222221 11111 234788999999999887   99999999999887655443


Q ss_pred             ----CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-hCC
Q 014594          313 ----NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMG  386 (422)
Q Consensus       313 ----~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~g  386 (422)
                          +.++..+.++.++++.-+... .+++++++++++.+.|+++++ .+.++.++++++.++...++.++.+.|. ++|
T Consensus       275 ~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~iv~i~~~~~~~~~~l~~~L~~~~g  353 (407)
T PRK09064        275 IFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAAGI-PVMPNESHIVPVMVGDPEKCKKASDMLLEEHG  353 (407)
T ss_pred             cccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC-CCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCC
Confidence                456667777777765422223 567888999999999998864 4556678888888753335678888887 569


Q ss_pred             cEEEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          387 VMIRHYNNKE---LKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       387 I~v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      |.+++...+.   ..+++||+++   +.++++++.++|+++
T Consensus       354 i~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~  394 (407)
T PRK09064        354 IYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEV  394 (407)
T ss_pred             EEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            9998765432   3478999998   778888888887753

>PLN02242 methionine gamma-lyase

Probab=99.96  E-value=2.8e-27  Score=232.41  Aligned_cols=244  Identities=15%  Similarity=0.163  Sum_probs=190.5

Q ss_pred             CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH-----HHcCCEEEEecCC
Q 014594          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA-----AVNGAAVVKVPRK  200 (422)
Q Consensus       126 y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-----~~~g~~~~~v~~~  200 (422)
                      ++++...+|++.+++++|.  +.+++++|+++++..++.+++++||+|+++.|.|..+....     +..|++++.++. 
T Consensus        73 ~~~Pt~~~LE~~lA~l~g~--~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~-  149 (418)
T PLN02242         73 HFNPTVLNLGRQMAALEGT--EAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDI-  149 (418)
T ss_pred             CCChhHHHHHHHHHHHhCC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCC-
Confidence            3677889999999999996  46788999999999999999999999999999998775543     347888877763 


Q ss_pred             CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (422)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~  279 (422)
                          .|++++++++++.++|+|++++|+||||.+.+.+++.++++. |+++|+|++|..+...+.      ..+.++++.
T Consensus       150 ----~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~~~~------~~g~divv~  219 (418)
T PLN02242        150 ----TDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVLSPA------RLGADVVVH  219 (418)
T ss_pred             ----CCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCCCHH------HcCCcEEEE
Confidence                389999999973359999999999999999999999999987 999999999987654221      224569999


Q ss_pred             cChhhhcccccc-ceeeecCHHHHHHHHHhcC----CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594          280 TFSKRAGLAGLR-VGYGAFPLSIIEYLWRAKQ----PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP  353 (422)
Q Consensus       280 S~SK~~~~~G~r-~G~i~~~~~~~~~l~~~~~----~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~  353 (422)
                      ||||.++.+|.+ .||+++++++++.+.....    ..+.+...|.++..++... .+. +.++++++++.+.+.|++++
T Consensus       220 S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l~-tl~~r~~~~~~~a~~la~~L~~~~  298 (418)
T PLN02242        220 SISKFISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSERLP-HLSLRMKEHCRRAMEYAKRMKELG  298 (418)
T ss_pred             eCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCCC-cHHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999888887 5999999999998886643    2444555667666666544 555 77899999999999999986


Q ss_pred             CCcccCC-------------------CceEEEEEeCCCCCHHHHHHHHH
Q 014594          354 FLNPYPS-------------------YSNFILCEVTSGMDAKKLKDDLA  383 (422)
Q Consensus       354 ~~~~~p~-------------------~~~f~~~~~~~~~~~~~~~~~L~  383 (422)
                      ....+|.                   .|..+.+++.....+..|++.|.
T Consensus       299 ~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l~  347 (418)
T PLN02242        299 LKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDTEERANRLMRYLQ  347 (418)
T ss_pred             CEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECCHHHHHHHHHHhh
Confidence            4223342                   23456677742223456666664

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=99.96  E-value=6e-27  Score=231.14  Aligned_cols=316  Identities=22%  Similarity=0.209  Sum_probs=227.2

Q ss_pred             CCeEEcCCC-CCCCCCCHHHHHHHhc-CC-CCC-------CC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           95 EDIVKIDAN-ENPYGPPPEVREALGQ-LK-FPY-------IY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        95 ~~~i~l~~~-~~~~~~~~~v~~al~~-~~-~~~-------~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      +++++|++| ...++.+|++++++.+ +. ++.       .| ..+...+|++++++++|. + ..++.+++++++..++
T Consensus        45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~-~-~~l~~~sG~~an~~ai  122 (402)
T TIGR01821        45 KDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGK-E-SALVFTSGYVANDATL  122 (402)
T ss_pred             eeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCC-C-eEEEECchHHHHHHHH
Confidence            557888776 5678889999988865 21 221       12 233467899999999994 3 4555566688888888


Q ss_pred             HHhcC--CCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---CCCeEEEEeCCCCccCcCCCHH
Q 014594          164 RCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDE  238 (422)
Q Consensus       164 ~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~e  238 (422)
                      ..+..  +++.|+.....|......+...|+++..++.     .|++++++.++.   .++++|++++|+||+|.+.+.+
T Consensus       123 ~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~  197 (402)
T TIGR01821       123 ATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-----NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIE  197 (402)
T ss_pred             HHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-----CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHH
Confidence            87765  6777776666676666667778888766652     367777777652   3678999999999999999999


Q ss_pred             HHHHHHcC-CCeEEEccCCccccCCC--ch-hhhhhc-CCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCC-
Q 014594          239 DLLKILEM-PILVVLDEAYTEFSGLE--SR-MEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY-  312 (422)
Q Consensus       239 ~l~~i~~~-~~~li~Deay~~~~~~~--~~-~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~-  312 (422)
                      ++.++++. |+++|+||+|....+++  .. ....+. .+.+++++||||++|++|   ||+++++++++.+.....++ 
T Consensus       198 ~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~~~~~~~l~~~~~~~~  274 (402)
T TIGR01821       198 EICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAASRKLIDAIRSYAPGFI  274 (402)
T ss_pred             HHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecCHHHHHHHHHhCcCce
Confidence            99999987 99999999998433221  11 111111 233688899999999888   99999999999887655442 


Q ss_pred             ---CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-hCCc
Q 014594          313 ---NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGV  387 (422)
Q Consensus       313 ---~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI  387 (422)
                         +.++..+.++.++|+..+... .++++.++++++.+.|+++++ .+.++.++++.+.++....+.++.+.|. ++||
T Consensus       275 ~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~i~~i~~~~~~~a~~~~~~L~~~~Gi  353 (402)
T TIGR01821       275 FTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEALGI-PVIPNPSHIVPVIIGDAALCKKVSDLLLNKHGI  353 (402)
T ss_pred             ecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHcCC-CcCCCCCCEEEEEeCCHHHHHHHHHHHHhcCCE
Confidence               467778888888876532113 566677889999999998864 4456678888887753234567888887 5699


Q ss_pred             EEEeCCCC---CCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014594          388 MIRHYNNK---ELKGYVRVSV---GKPEHTDALMECLMHL  421 (422)
Q Consensus       388 ~v~~~~~~---~~~~~iRis~---~~~~~~~~l~~al~~l  421 (422)
                      .+++...+   ...+++||++   .+.++++++.++++.+
T Consensus       354 ~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~  393 (402)
T TIGR01821       354 YVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLV  393 (402)
T ss_pred             EEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            99875432   3347999998   4667778887777653

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=99.96  E-value=7.3e-27  Score=228.70  Aligned_cols=318  Identities=15%  Similarity=0.161  Sum_probs=226.9

Q ss_pred             CCCCeEEcCCCCC--CCCCCH---HH----HHHHhcCCCCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           93 KPEDIVKIDANEN--PYGPPP---EV----REALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        93 ~~~~~i~l~~~~~--~~~~~~---~v----~~al~~~~~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      .+.+++.|.+++.  ++.++.   .+    .++|..-+  ..| ++.+..+||+++++++|.  +++++++|+++|+.++
T Consensus         9 ~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~gd--~~Y~~~~g~~~Leeaia~~~g~--~~vv~t~~Gt~Al~la   84 (431)
T cd00617           9 AGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLGD--EAYAGSKSFYDLEDAVQDLFGF--KHIIPTHQGRGAENIL   84 (431)
T ss_pred             cCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhCC--CccCCCCCHHHHHHHHHHHHCC--CeEEEcCCHHHHHHHH
Confidence            4456678888776  554432   33    33333212  347 667899999999999996  5899999999999999


Q ss_pred             HHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC----------CCCCCHHHHHHHhhcC---CCeEEEEeCCCC
Q 014594          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS----------DFSLNVELIADAVERE---KPKCIFLTSPNN  229 (422)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~----------~~~~d~~~l~~~i~~~---~~~~i~l~~p~N  229 (422)
                      +.++++|||.| +++|.|..+.......|++++.++.+.          .+.+|+++|++.+++.   ++++|++++|+|
T Consensus        85 ~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N  163 (431)
T cd00617          85 FSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNN  163 (431)
T ss_pred             HHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcC
Confidence            99999999987 689999999888899999999998642          2449999999999732   388999999999


Q ss_pred             cc-CcCCCHHHHHHHHc---C-CCeEEEccCCcc----cc------CCCchhhhhhcCCcEEEEccChhhhcccccc---
Q 014594          230 PD-GSIINDEDLLKILE---M-PILVVLDEAYTE----FS------GLESRMEWVKKHDNLIVLRTFSKRAGLAGLR---  291 (422)
Q Consensus       230 Pt-G~~~~~e~l~~i~~---~-~~~li~Deay~~----~~------~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r---  291 (422)
                      |+ |.+++.+++++|++   . |++||+|+++..    |.      +.+..+.     +.++.+.|++|.+.+.|+|   
T Consensus       164 ~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~-----ei~~e~~s~sd~~~mS~~K~~~  238 (431)
T cd00617         164 TAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIA-----EIAREMFSYADGCTMSAKKDGL  238 (431)
T ss_pred             CCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHH-----HHHHHhhccCCEEEEEeecCCC
Confidence            98 99999987765554   4 999999999642    11      1111111     1234567788888888887   


Q ss_pred             ---ceeeecCH-HHHHHHHHhcCC-------CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccC
Q 014594          292 ---VGYGAFPL-SIIEYLWRAKQP-------YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYP  359 (422)
Q Consensus       292 ---~G~i~~~~-~~~~~l~~~~~~-------~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p  359 (422)
                         .||+++++ +++++++.....       .+.+.....++..+|++....+ +.+++ ++++++.+.|++.|+..+.|
T Consensus       239 ~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~~~~l~~~~-~~r~~l~~~L~~~G~~v~~P  317 (431)
T cd00617         239 VNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDYLRHRV-EQVRYLGDRLDEAGVPIVEP  317 (431)
T ss_pred             CccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcccHHHHHHHH-HHHHHHHHHHHHCCCCccCC
Confidence               67999986 688888753311       1234444444444665421123 33344 35699999999988666778


Q ss_pred             CCceEEEEEeCC--------CCCHHHHHHHHH-hCCcEEEe-CC------CCC------CCCeEEEEec----ChhhHHH
Q 014594          360 SYSNFILCEVTS--------GMDAKKLKDDLA-KMGVMIRH-YN------NKE------LKGYVRVSVG----KPEHTDA  413 (422)
Q Consensus       360 ~~~~f~~~~~~~--------~~~~~~~~~~L~-~~gI~v~~-~~------~~~------~~~~iRis~~----~~~~~~~  413 (422)
                      .+++|+|++.+.        ..++.+++..|. +.||.+.. |.      ...      .-..+|+++.    +.+++|.
T Consensus       318 ~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~  397 (431)
T cd00617         318 AGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDY  397 (431)
T ss_pred             CcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHH
Confidence            999999999762        235888887766 88999763 22      111      1368999975    5677888


Q ss_pred             HHHHHhhh
Q 014594          414 LMECLMHL  421 (422)
Q Consensus       414 l~~al~~l  421 (422)
                      +.+++..+
T Consensus       398 ~~~~~~~~  405 (431)
T cd00617         398 VAAAVIAL  405 (431)
T ss_pred             HHHHHHHH
Confidence            88887764

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=99.96  E-value=1.5e-27  Score=234.05  Aligned_cols=313  Identities=19%  Similarity=0.187  Sum_probs=224.0

Q ss_pred             EcCCCCCCCCCCHHHHHHHhcC-CC-------CCCCCCcchHHHHHHHHHHc---CC-CCCCEEEeCCHHHHHHHHHHHh
Q 014594           99 KIDANENPYGPPPEVREALGQL-KF-------PYIYPDPESRRLRAALAKDS---GL-ESDHILVGCGADELIDLIMRCV  166 (422)
Q Consensus        99 ~l~~~~~~~~~~~~v~~al~~~-~~-------~~~y~~~~~~~lr~~la~~~---~~-~~~~i~~~~G~~~al~~~~~~l  166 (422)
                      .|+.+.... +++.|++++.+. ..       .+.|+..+...+++++++++   +. ++++|++|+|+++++..+++++
T Consensus         2 yld~aa~~~-~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~   80 (382)
T TIGR03403         2 YLDNNATTM-LDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGV   80 (382)
T ss_pred             cccCcCCCC-CCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHH
Confidence            455555544 457788888652 11       12234344566777777665   44 6789999999999999999875


Q ss_pred             c-----CC-CCEEEEcCCCchhHH---HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594          167 L-----DP-GDKIVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (422)
Q Consensus       167 ~-----~~-gd~Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (422)
                      .     ++ +++|+++...|+.+.   ..++..|++++.++.++++.+|++.+++.+. ++++++++++|+||||.++|.
T Consensus        81 ~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~-~~t~lv~~~~~~n~tG~~~~~  159 (382)
T TIGR03403        81 YFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAIT-EKTALVSVMWANNETGMIFPI  159 (382)
T ss_pred             HHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhcc-cCCeEEEEEcccCCCccccCH
Confidence            2     45 478999887766444   3345689999999987777899999999997 689999999999999999999


Q ss_pred             HHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHH--HHH-----HHhc
Q 014594          238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII--EYL-----WRAK  309 (422)
Q Consensus       238 e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~--~~l-----~~~~  309 (422)
                      +++.++++. |+++++|+++.....   .. .....+..+++.|++|.+|.+|  +|+++++++..  ..+     ....
T Consensus       160 ~~I~~la~~~g~~~ivD~a~~~g~~---~~-~~~~~~~D~~~~s~~K~~gp~G--~g~l~vr~~~~~~p~~~g~~~~~~~  233 (382)
T TIGR03403       160 KEIGEICKERGVLFHTDAVQAIGKI---PV-DVQKAGVDFLSFSAHKFHGPKG--VGGLYIRKGVELTPLFHGGEHMGGR  233 (382)
T ss_pred             HHHHHHHHHcCCEEEEechhhcCCC---cc-CccccCCCEEEEcchhhCCCCc--eEEEEECCCCCCCCcccCCCCCCCc
Confidence            999999987 999999999873221   11 1223334588899999877677  57777654321  111     0112


Q ss_pred             CCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC----ceEEEEEeCCCCCHHHHHHHHH
Q 014594          310 QPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGMDAKKLKDDLA  383 (422)
Q Consensus       310 ~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~f~~~~~~~~~~~~~~~~~L~  383 (422)
                      .+++++...+.++..+++. .++++ .++++++.++++.+.|++++++.+.++.    .+++.+.++ +.+.+++...|.
T Consensus       234 ~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~  312 (382)
T TIGR03403       234 RSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIK-GVEGEAMLWDLN  312 (382)
T ss_pred             ccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeC-CCCHHHHHHhhc
Confidence            3467888888777777754 24456 7789999999999999988766654332    457777775 567888888888


Q ss_pred             hCCcEEEeCCCC---C----------------CCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          384 KMGVMIRHYNNK---E----------------LKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       384 ~~gI~v~~~~~~---~----------------~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      ++||.++.|...   .                ..+.||+|+.   +.+|+|++.++|+.
T Consensus       313 ~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~  371 (382)
T TIGR03403       313 KAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKK  371 (382)
T ss_pred             cCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHH
Confidence            999999965321   0                1367999986   56667777777654

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=99.96  E-value=2.1e-26  Score=211.96  Aligned_cols=331  Identities=18%  Similarity=0.262  Sum_probs=245.6

Q ss_pred             CCCchHHHHHHhCCCC-CCeEEcCCCC--CCCC---CCHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHHHc-C----
Q 014594           79 PILPFEVLSIQLGRKP-EDIVKIDANE--NPYG---PPPEVREALGQL---KFPYIY-PDPESRRLRAALAKDS-G----  143 (422)
Q Consensus        79 ~~~~~~~~~~~~~~~~-~~~i~l~~~~--~~~~---~~~~v~~al~~~---~~~~~y-~~~~~~~lr~~la~~~-~----  143 (422)
                      |.+++-.+...+..++ .+.|+|+.|.  +..+   .-+.|.+|-..+   .....| |..|..++++++++++ |    
T Consensus         9 p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~llFG~d~~   88 (396)
T COG1448           9 PADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLLFGADSP   88 (396)
T ss_pred             CCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHhcCCCcH
Confidence            5677777888877654 4579999883  3333   334555554432   334567 7789999999999985 5    


Q ss_pred             -CCCCCE--EEeCCHHHHHHHHHHHh--cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhc
Q 014594          144 -LESDHI--LVGCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER  216 (422)
Q Consensus       144 -~~~~~i--~~~~G~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~  216 (422)
                       ++.++|  +-|.|||.||.+....+  ..+..+|.+++|+|+.+..+.+..|.++..+|.  ..+..+|.+.+.+.+++
T Consensus        89 ~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~  168 (396)
T COG1448          89 ALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKT  168 (396)
T ss_pred             HHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHh
Confidence             233443  67889999999988855  346677999999999999999999999999993  34557999999998875


Q ss_pred             C-CCeEEEEe-CCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC----chhh-hhhcCCcEEEEccChhhh
Q 014594          217 E-KPKCIFLT-SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE----SRME-WVKKHDNLIVLRTFSKRA  285 (422)
Q Consensus       217 ~-~~~~i~l~-~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~----~~~~-~~~~~~~~i~~~S~SK~~  285 (422)
                      - ...+|+|. -.|||||.-++.+++.+|++.    +.+.+.|-||.+|..+.    ..+. ........+++.||||.|
T Consensus       169 a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnf  248 (396)
T COG1448         169 APEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNF  248 (396)
T ss_pred             CCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhh
Confidence            3 33455554 569999999999999999885    99999999999998542    1122 222334489999999999


Q ss_pred             ccccccceeeec---CHHHHHHH----HHh-cCCC-CCcHHHHHHHHHHccCC----hHHH----HHHHHHHHHHHHHHH
Q 014594          286 GLAGLRVGYGAF---PLSIIEYL----WRA-KQPY-NVSVAAEVAACAALQNP----IYLE----VKEALIKERERLFKL  348 (422)
Q Consensus       286 ~~~G~r~G~i~~---~~~~~~~l----~~~-~~~~-~~~~~~~~aa~~~L~~~----~~~~----~~~~~~~~~~~l~~~  348 (422)
                      |+.|.|+|++..   +.+...++    ... +..| +++..+...+...|+++    +|.+    +++++.++|..+.+.
T Consensus       249 gLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~  328 (396)
T COG1448         249 GLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDA  328 (396)
T ss_pred             hhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999998665   44444433    222 2334 56677888888999985    4543    899999999999999


Q ss_pred             HccC----CCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhhh
Q 014594          349 LKDV----PFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMHL  421 (422)
Q Consensus       349 L~~~----~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~l  421 (422)
                      |++.    .+..+..+.|+|.+.    |.+.+++.+...++||++...+        |||++  +..+++.+.+++...
T Consensus       329 L~~~~~~~~f~~i~~Q~GMFsy~----Gls~~QV~rLree~~IY~v~sG--------Ri~vaGl~~~ni~~va~ai~~v  395 (396)
T COG1448         329 LKALGAPRNFDFIISQRGMFSYT----GLSPEQVDRLREEFGIYLVASG--------RINVAGLNTSNIDYVAKAIAAV  395 (396)
T ss_pred             HHhhCCCcccchHhhcCceeecC----CCCHHHHHHHHHhccEEEecCC--------eeeeccCChhhHHHHHHHHHhh
Confidence            9983    344456788888876    4567777666669999999876        99997  456678888887653

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=99.96  E-value=4.1e-27  Score=208.33  Aligned_cols=316  Identities=18%  Similarity=0.251  Sum_probs=223.2

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhc----C-------CCCCCCCCc-chHHHHHHHHHHc------CCCCCCEEEeCCHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQ----L-------KFPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGADE  157 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~----~-------~~~~~y~~~-~~~~lr~~la~~~------~~~~~~i~~~~G~~~  157 (422)
                      ..|.|+.|.+..  -|++.+...+    +       +....|..+ |...|.+++++++      ++++++|.+|+|++.
T Consensus        31 g~imLggGNPa~--iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs  108 (417)
T COG3977          31 GAIMLGGGNPAR--IPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQS  108 (417)
T ss_pred             CceeeCCCCccc--ChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccc
Confidence            368887765433  2555544432    1       112567555 7788888888875      468899999999999


Q ss_pred             HHHHHHHHhcC---CC--CEEEE-cCCCchhHHHHHHHcCCEEEEec-----CCC---CCCCCHHHHHHHhhcCCCeEEE
Q 014594          158 LIDLIMRCVLD---PG--DKIVD-CPPTFTMYEFDAAVNGAAVVKVP-----RKS---DFSLNVELIADAVEREKPKCIF  223 (422)
Q Consensus       158 al~~~~~~l~~---~g--d~Vl~-~~p~y~~~~~~~~~~g~~~~~v~-----~~~---~~~~d~~~l~~~i~~~~~~~i~  223 (422)
                      +..-++..|..   .|  .+|++ ..|.|.+|......-. -.+.+.     .+.   .+++|.+++.-  . +++.+|+
T Consensus       109 ~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d-~fVs~kP~iel~~~g~FKY~vDF~~l~i--~-e~~g~ic  184 (417)
T COG3977         109 AFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEED-LFVSAKPNIELLPAGQFKYHVDFEHLHI--G-ESTGAIC  184 (417)
T ss_pred             hHHHHHHHhcCccCCCcceeEeeccChhhccccccccCcc-ceeeccCCcccccccceeeccCHHHccc--c-cccceEE
Confidence            99999987643   34  23444 5788888876532211 122222     111   24678877754  2 6889999


Q ss_pred             EeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCcc-ccCCC-chhhhhhcCCcEEEEccChhhhccccccceeeec
Q 014594          224 LTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTE-FSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (422)
Q Consensus       224 l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~-~~~~~-~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~  297 (422)
                      ++.|.||||.+++.+|+.+|...    |+.+|+|.+|.. |-.-. +... .--.+|++.|.|+|| .|+||.|+|.+++
T Consensus       185 ~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~-~~w~~NiilC~SLSK-~GLPG~R~GIiIa  262 (417)
T COG3977         185 VSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDAT-PLWNENIILCMSLSK-LGLPGSRCGIIIA  262 (417)
T ss_pred             ecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceeccccc-ccCCCCEEEEeehhh-cCCCCcceeEEEc
Confidence            99999999999999999988654    999999999973 22100 0011 113589999999999 7999999999999


Q ss_pred             CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-----HHHHHHHHHHHHHHHHc----cCCCCcccCCCceEEE
Q 014594          298 PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-----VKEALIKERERLFKLLK----DVPFLNPYPSYSNFIL  366 (422)
Q Consensus       298 ~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-----~~~~~~~~~~~l~~~L~----~~~~~~~~p~~~~f~~  366 (422)
                      ++++++.+......  ..++.++++.+..+++.++.++     ++-.|+++.+...+.|+    +.++....|+++.|+|
T Consensus       263 ne~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlW  342 (417)
T COG3977         263 NEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLW  342 (417)
T ss_pred             cHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeecCCcceeeh
Confidence            99999999876654  4556788889999998876543     44456666665555554    4455556788999998


Q ss_pred             EEeCC-CCCHHHHHHHHHhCCcEEEeCCCC--C-------CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          367 CEVTS-GMDAKKLKDDLAKMGVMIRHYNNK--E-------LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       367 ~~~~~-~~~~~~~~~~L~~~gI~v~~~~~~--~-------~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +.+.+ +.+.+++++.|+++||++.||..+  +       ...|+|+++...+  ++++.++++|
T Consensus       343 LWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~~~--~~ie~Gva~l  405 (417)
T COG3977         343 LWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVPEP--EKIEKGVAIL  405 (417)
T ss_pred             hhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEecCCCH--HHHHHHHHHH
Confidence            76653 578999999999999999998871  2       2569999998754  4466666554

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=99.96  E-value=2.4e-26  Score=224.89  Aligned_cols=282  Identities=19%  Similarity=0.170  Sum_probs=213.6

Q ss_pred             hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhc------CCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCC
Q 014594          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL------DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS  204 (422)
Q Consensus       131 ~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~  204 (422)
                      ..++++.+++++|++++++++++|+++++..++.++.      ++||+|+++.++|..+...++..|++++.++.++++.
T Consensus        61 ~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~  140 (373)
T TIGR03812        61 EEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYT  140 (373)
T ss_pred             HHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCC
Confidence            3689999999999988899999999999988877654      4678999999999999988999999999999877788


Q ss_pred             CCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCC-----Cc-hhhhhhcCCcEEE
Q 014594          205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-----ES-RMEWVKKHDNLIV  277 (422)
Q Consensus       205 ~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~-----~~-~~~~~~~~~~~i~  277 (422)
                      +|++++++.+. +++..+++++|+||||.+.+.+++.++++. |+++|+|++|..+...     .. ....+....-..+
T Consensus       141 ~d~~~l~~~l~-~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~  219 (373)
T TIGR03812       141 VDVKDVEDLID-DNTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSI  219 (373)
T ss_pred             cCHHHHHHHHh-hCcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEE
Confidence            99999999997 456555555689999999999999999987 9999999999855310     00 0000001122234


Q ss_pred             EccChhhhccccccceeee-cCHHHHHHHHHhcCCC-----------CCcHHHHHHHHHHccC--ChHHH-HHHHHHHHH
Q 014594          278 LRTFSKRAGLAGLRVGYGA-FPLSIIEYLWRAKQPY-----------NVSVAAEVAACAALQN--PIYLE-VKEALIKER  342 (422)
Q Consensus       278 ~~S~SK~~~~~G~r~G~i~-~~~~~~~~l~~~~~~~-----------~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~  342 (422)
                      ..|.+| |++++.+.|+++ .++++++.+.. ..+|           +.+.....++.++|+.  .+..+ ..+++.+++
T Consensus       220 ~~s~~K-~~~~~~~~G~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~  297 (373)
T TIGR03812       220 TIDPHK-MGLSPIPAGGILFRSKSYLKYLSV-DAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENT  297 (373)
T ss_pred             EECccc-cCCCcCCceEEEEeCHHHHhhhcc-cCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            457779 777888888665 57888877642 2222           2334555666666654  33445 788999999


Q ss_pred             HHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          343 ERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       343 ~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      +++.+.|+++++..+.++..+++.++++   +..++.+.|.++||.++.+.   .++++||+++   +.++++++.++|+
T Consensus       298 ~~l~~~L~~~g~~~~~~~~~~~v~~~~~---~~~~v~~~L~~~gi~v~~~~---~~~~iRis~~~~~t~edid~l~~~L~  371 (373)
T TIGR03812       298 RYLVEELKKIGFEPVIEPVLNIVAFEVD---DPEEVRKKLRDRGWYVSVTR---CPKALRIVVMPHVTREHIEEFLEDLK  371 (373)
T ss_pred             HHHHHHHHhCCCeEEcCCCceEEEEEeC---CHHHHHHHHHHCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHh
Confidence            9999999998865455567788888886   35689999999999998763   2579999986   6777888888877


Q ss_pred             hh
Q 014594          420 HL  421 (422)
Q Consensus       420 ~l  421 (422)
                      .|
T Consensus       372 ~~  373 (373)
T TIGR03812       372 EI  373 (373)
T ss_pred             hC
Confidence            54

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=99.96  E-value=1e-26  Score=229.64  Aligned_cols=315  Identities=17%  Similarity=0.163  Sum_probs=220.9

Q ss_pred             eEEcCCCCCCCCCCHHHHHHHhcC---CCC------CCC-CCcchHHHHH----HHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           97 IVKIDANENPYGPPPEVREALGQL---KFP------YIY-PDPESRRLRA----ALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~---~~~------~~y-~~~~~~~lr~----~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      .++|..+++..  +|.+++++...   .+.      ..| +..+...+++    .+++++|.+..+|++++ +++++..+
T Consensus        21 ~~~~~~~~~~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~s-gt~a~~~~   97 (402)
T cd00378          21 TLELIASENFT--SPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPHS-GSQANLAV   97 (402)
T ss_pred             CeeeeccCCcC--CHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecCC-cHHHHHHH
Confidence            58888877776  68999998752   111      223 2233445555    46678898766666665 57899999


Q ss_pred             HHHhcCCCCEEEEcCCCchhHHHH-----HHHcCCEEEEecCCC---CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594          163 MRCVLDPGDKIVDCPPTFTMYEFD-----AAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (422)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~-----~~~~g~~~~~v~~~~---~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~  234 (422)
                      +.+++++||+|+++.|+|..+...     ++..|+++..++.+.   ++.+|++++++.+.+++++++++++|+||  ..
T Consensus        98 l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~--~~  175 (402)
T cd00378          98 YFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAYP--RP  175 (402)
T ss_pred             HHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccC--CC
Confidence            999999999999999999755332     555787776666422   68999999999996578999999998875  56


Q ss_pred             CCHHHHHHHHcC-CCeEEEccCC-ccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCH-HHHHHHHHhcCC
Q 014594          235 INDEDLLKILEM-PILVVLDEAY-TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQP  311 (422)
Q Consensus       235 ~~~e~l~~i~~~-~~~li~Deay-~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~~l~~~~~~  311 (422)
                      .+.+++.++++. |+++|+|++| .++.+.+.....+.  ...++++|+||.+  +|+|+||+++++ ++++.+.+...+
T Consensus       176 ~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~dv~~~s~sK~l--~G~~gg~i~~~~~~~~~~l~~~~~~  251 (402)
T cd00378         176 IDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GADVVTTTTHKTL--RGPRGGLILTRKGELAKKINSAVFP  251 (402)
T ss_pred             cCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CCcEEEeccccCC--CCCCceEEEeccHHHHHHHHHHhCc
Confidence            789999999987 9999999996 43332221111122  2237899999965  789999999987 898888776554


Q ss_pred             C--CCc-HHHHHHHHHHccC-Ch-HHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC-CCCHHHHHHHHH
Q 014594          312 Y--NVS-VAAEVAACAALQN-PI-YLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKLKDDLA  383 (422)
Q Consensus       312 ~--~~~-~~~~~aa~~~L~~-~~-~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~-~~~~~~~~~~L~  383 (422)
                      +  +.+ ...+.++..++.. .. +.+ .+++++++++++.+.|+++++... .+.+++|+|+++++ +.+...+.+.|.
T Consensus       252 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~  331 (402)
T cd00378         252 GLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFKVVSGGTDNHLVLVDLRPKGITGKAAEDALE  331 (402)
T ss_pred             cccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEeecCCCCeEEEEeCCccCCCHHHHHHHHH
Confidence            3  222 2233332333322 12 444 778899999999999998864332 35678999999973 456677888788


Q ss_pred             hCCcEEEeCCCC------CCCCeEEEEecC-------hhhHHHHHHHHhh
Q 014594          384 KMGVMIRHYNNK------ELKGYVRVSVGK-------PEHTDALMECLMH  420 (422)
Q Consensus       384 ~~gI~v~~~~~~------~~~~~iRis~~~-------~~~~~~l~~al~~  420 (422)
                      ++||.+.+...+      ...+++||++..       .++++++.+.|++
T Consensus       332 ~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~  381 (402)
T cd00378         332 EAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIAR  381 (402)
T ss_pred             HcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHH
Confidence            999999853321      134689999854       4566666666654

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=99.96  E-value=2.4e-27  Score=235.11  Aligned_cols=323  Identities=18%  Similarity=0.151  Sum_probs=223.8

Q ss_pred             CCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-CCCCCCCCCc-----chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPYIYPDP-----ESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~~y~~~-----~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      .+++++||+..|  ...++ .+|++.+++.+ +.....|+..     ...++++.++++++.+.+++++++|+++++..+
T Consensus        33 ~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~a  112 (413)
T cd00610          33 VDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAA  112 (413)
T ss_pred             CCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCcccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHH
Confidence            356789999886  55666 78999988876 3333444432     367899999999987788999999999999999


Q ss_pred             HHHhc--CCCCEEEEcCCCchhHHHHHHHc-C------------CEEEEecCCC------CCCCCHHHHHHHhhc--CCC
Q 014594          163 MRCVL--DPGDKIVDCPPTFTMYEFDAAVN-G------------AAVVKVPRKS------DFSLNVELIADAVER--EKP  219 (422)
Q Consensus       163 ~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g------------~~~~~v~~~~------~~~~d~~~l~~~i~~--~~~  219 (422)
                      ++.+.  .++++|++.+++|+......... +            .+++.+|.+.      ++..|++.+++.+++  .++
T Consensus       113 l~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~  192 (413)
T cd00610         113 LKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEV  192 (413)
T ss_pred             HHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCE
Confidence            99763  56899999999998755443332 1            2355666432      234489999999874  356


Q ss_pred             eEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcccccccee
Q 014594          220 KCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY  294 (422)
Q Consensus       220 ~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~  294 (422)
                      ++++++..+|++|.+++    .+++.++++. |+++|+||+|..|...+.... ....+...-+.|+||.++ .|+|+||
T Consensus       193 ~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~-~~~~~~~~d~~t~sK~l~-~g~~~g~  270 (413)
T cd00610         193 AAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFA-FEHFGVEPDIVTLGKGLG-GGLPLGA  270 (413)
T ss_pred             EEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhh-HhhcCCCCCeEEEccccc-CccccEE
Confidence            67776677788899886    5666666665 999999999998743322111 111111112458899998 4899999


Q ss_pred             eecCHHHHHHH--HHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCC----CCcccCCCceEEE
Q 014594          295 GAFPLSIIEYL--WRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVP----FLNPYPSYSNFIL  366 (422)
Q Consensus       295 i~~~~~~~~~l--~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~~~f~~  366 (422)
                      +++++++++.+  ....  ..++.+++.+.++.++|+.-+..+..++++++.+++.+.|+++.    .....+..|.+++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~  350 (413)
T cd00610         271 VLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIG  350 (413)
T ss_pred             EEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEE
Confidence            99999999886  2222  24677888888888777532111166677777777777776642    2222345678888


Q ss_pred             EEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594          367 CEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       367 ~~~~~~--------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  420 (422)
                      +.+++.        .+...+.+.|.++||.+.++.    .+++|++++...+.+++.+++++
T Consensus       351 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~----~~~lR~~~~~~~t~~~i~~~~~~  408 (413)
T cd00610         351 IELVKDRATKPPDKELAAKIIKAALERGLLLRPSG----GNVIRLLPPLIITEEEIDEGLDA  408 (413)
T ss_pred             EEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC----CCEEEEECCCcCCHHHHHHHHHH
Confidence            888643        356788899999999999975    57899987643223444444444

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=99.96  E-value=3.2e-26  Score=223.05  Aligned_cols=309  Identities=12%  Similarity=0.033  Sum_probs=226.8

Q ss_pred             CCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCCCCC--CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 014594          104 ENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCPPT  179 (422)
Q Consensus       104 ~~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~~~~--~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~  179 (422)
                      ..|...++.|.+++.... .++-+..  -..++|+.++++++.+++  .|++|+|++++++.++.+++.+||.+++..+.
T Consensus         9 pgp~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~   87 (363)
T TIGR02326         9 PGPLTTSRTVKEAMLFDW-CTWDSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVING   87 (363)
T ss_pred             CCCCCCCHHHHHHhCCCC-CCCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCC
Confidence            345566788888886632 1211222  256889999999998754  69999999999999999998888887776665


Q ss_pred             chhH--HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccC
Q 014594          180 FTMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA  255 (422)
Q Consensus       180 y~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Dea  255 (422)
                      +...  ...++..|++++.++.+++..+|++++++.+++ .+++++++++++||||..+|.++|.++++. |+++|+|++
T Consensus        88 ~~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~  167 (363)
T TIGR02326        88 AYGARIVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAM  167 (363)
T ss_pred             hhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEcc
Confidence            5433  466788999999999877778999999999864 356788889999999999999999999987 999999988


Q ss_pred             CccccCCCchhhhhhcCCcEEEEccChhhh-ccccccceeeecCHHHHHHHHHh--------------------cCCCCC
Q 014594          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRA--------------------KQPYNV  314 (422)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~r~G~i~~~~~~~~~l~~~--------------------~~~~~~  314 (422)
                      ++... .+  . .+...+..+++.|++|.+ |.+|  +||++++++.++++...                    ...|+.
T Consensus       168 ~~~g~-~~--~-~~~~~~~D~~~~s~~K~l~~p~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~  241 (363)
T TIGR02326       168 SSFGG-IP--I-DIAELHIDYLISSANKCIQGVPG--FGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTS  241 (363)
T ss_pred             ccccC-cc--c-chhhcCccEEEecCccccccCCc--ceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCC
Confidence            76322 11  1 122334568889999976 4445  79999999887765321                    023566


Q ss_pred             cHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCcccC---CCceEEEEEeCCC--CCHHHHHHHHHhC
Q 014594          315 SVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPYP---SYSNFILCEVTSG--MDAKKLKDDLAKM  385 (422)
Q Consensus       315 ~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p---~~~~f~~~~~~~~--~~~~~~~~~L~~~  385 (422)
                      +...+.++.++++.   ....+ ++++++++++++.+.|+++++....+   ..+..+++.+++.  .+..++.+.|.++
T Consensus       242 ~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~  321 (363)
T TIGR02326       242 PTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEIQSPIITSFYSPEDPDYRFADFYQRLKEQ  321 (363)
T ss_pred             cHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCceEEEEECCCCCCCCHHHHHHHHHHC
Confidence            77777776666543   22345 88999999999999998886433222   2334567888753  5778899999999


Q ss_pred             CcEEEeCCCCCCCCeEEEEe-c--ChhhHHHHHHHHhh
Q 014594          386 GVMIRHYNNKELKGYVRVSV-G--KPEHTDALMECLMH  420 (422)
Q Consensus       386 gI~v~~~~~~~~~~~iRis~-~--~~~~~~~l~~al~~  420 (422)
                      ||.++++..+ ..+++||++ +  +.++++++.++|+.
T Consensus       322 gi~v~~g~~~-~~~~iRi~~~~~~~~edv~~~l~~l~~  358 (363)
T TIGR02326       322 GFVIYPGKVS-QVDCFRIGNIGEVDAADITRLLTAIGK  358 (363)
T ss_pred             CEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence            9999987643 357999996 4  55566666666654

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=99.96  E-value=5.9e-26  Score=220.84  Aligned_cols=318  Identities=21%  Similarity=0.255  Sum_probs=246.7

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhcC----CCC-C--CCCCc-----chHHHHHHHHHHcCCCC-CCEEEeCCHHHHHH
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQL----KFP-Y--IYPDP-----ESRRLRAALAKDSGLES-DHILVGCGADELID  160 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~----~~~-~--~y~~~-----~~~~lr~~la~~~~~~~-~~i~~~~G~~~al~  160 (422)
                      +.+++.|++..... .|..|.+++.+.    ... +  .|+..     .+++.|+++++++|.++ ++|++|.|+|++++
T Consensus        20 ~~~~vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln   98 (405)
T COG0520          20 GKPLVYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALN   98 (405)
T ss_pred             CCCeEEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHH
Confidence            45679999887776 678888888762    111 1  12111     25689999999999985 89999999999999


Q ss_pred             HHHHHh---cCCCCEEEEcCCCch----hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCc
Q 014594          161 LIMRCV---LDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (422)
Q Consensus       161 ~~~~~l---~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~  233 (422)
                      .+..++   ..+||+|++..-.|+    ++...++..|++++.+|.+++..+|.+.++..++ ++||+|.+++.+|.||.
T Consensus        99 ~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~-~~Tklvais~vSn~tG~  177 (405)
T COG0520          99 LVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLIT-PKTKLVALSHVSNVTGT  177 (405)
T ss_pred             HHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcC-CCceEEEEECccccccc
Confidence            999998   689999999998886    5566677789999999987888999999999887 89999999999999999


Q ss_pred             CCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChh-hhccccccceeeecCHHHHHHHHHhcC-
Q 014594          234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSK-RAGLAGLRVGYGAFPLSIIEYLWRAKQ-  310 (422)
Q Consensus       234 ~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK-~~~~~G~r~G~i~~~~~~~~~l~~~~~-  310 (422)
                      +.|.++|.++++. |+++++|.+++.    +...-.+...+.++++.|..| .+|..|  +|.+++++++++.+..... 
T Consensus       178 ~~pv~~I~~la~~~ga~v~VDaaq~~----~h~~idv~~l~~Df~afsgHKwl~gP~G--iGvLy~r~~~l~~l~P~~~g  251 (405)
T COG0520         178 VNPVKEIAELAHEHGALVLVDAAQAA----GHLPIDVQELGCDFLAFSGHKWLLGPTG--IGVLYVRKELLEELEPFLGG  251 (405)
T ss_pred             cchHHHHHHHHHHcCCEEEEECcccc----CccCCCchhcCCCEEEEcccccccCCCc--eEEEEEchHHHhhcCCcccC
Confidence            9999999999998 999999999883    222233345566799999999 666446  8999999999988731100 


Q ss_pred             ------------------C-----CCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCccc-CC--
Q 014594          311 ------------------P-----YNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPY-PS--  360 (422)
Q Consensus       311 ------------------~-----~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p~--  360 (422)
                                        +     .+++.....++.++++   ... .+ +.++.++..+++.+.|++++.+.++ |.  
T Consensus       252 g~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig-~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~  330 (405)
T COG0520         252 GGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIG-MEAIEAHERELTEYLLEGLSELPGVEIYGPPDA  330 (405)
T ss_pred             CCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcc
Confidence                              0     1233333333344443   323 34 8888999999999999999877753 32  


Q ss_pred             -CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC--------CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          361 -YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK--------ELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       361 -~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~--------~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                       .+..+.+.++ +.+..++...|.++||.++.|..+        +....+|+|+.   +.+|+|+|.++|+++
T Consensus       331 ~r~~~vsF~v~-~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~  402 (405)
T COG0520         331 DRGGIVSFNVK-GIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKA  402 (405)
T ss_pred             cCceEEEEEeC-CCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence             4667778876 678999999999999999987542        22456999975   788899999999875

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=99.96  E-value=1.7e-26  Score=226.06  Aligned_cols=315  Identities=20%  Similarity=0.204  Sum_probs=226.0

Q ss_pred             EcCCCCCCCCCCHHHHHHHhcC-C-C--C---CCCCC-----cchHHHHHHHHHHcCCCC-CCEEEeCCHHHHHHHHHHH
Q 014594           99 KIDANENPYGPPPEVREALGQL-K-F--P---YIYPD-----PESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRC  165 (422)
Q Consensus        99 ~l~~~~~~~~~~~~v~~al~~~-~-~--~---~~y~~-----~~~~~lr~~la~~~~~~~-~~i~~~~G~~~al~~~~~~  165 (422)
                      .|+.+.+++++|+.+.+++.+. . .  .   ..|+.     ....++|+.++++++.+. ++|++|+|+++++..++.+
T Consensus         2 yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~   81 (376)
T TIGR01977         2 YFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKG   81 (376)
T ss_pred             CccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHh
Confidence            5788888888889998888652 1 1  1   12332     345689999999999854 4899999999999999999


Q ss_pred             hcCCCCEEEEcCCCchhHH----HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594          166 VLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (422)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~  241 (422)
                      ++++||+|++..+.|..+.    ..++..|++++.++.+.++.+|++++++.++ ++++++++++|+||||.+++.+++.
T Consensus        82 ~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~-~~~~~v~~~~~~n~tG~~~~~~~i~  160 (376)
T TIGR01977        82 LLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIK-TNTKLIVVSHASNVTGTILPIEEIG  160 (376)
T ss_pred             ccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcC-CCCeEEEEECCCCCccccCCHHHHH
Confidence            9999999999999987643    3455579999999977777899999999996 6899999999999999999999999


Q ss_pred             HHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHH-HHHHHHh-----------
Q 014594          242 KILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-IEYLWRA-----------  308 (422)
Q Consensus       242 ~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~-~~~l~~~-----------  308 (422)
                      ++++. |+++|+|++++.....-    .+...+.++++.|++|.++.|. ..|.++++++. ++.+...           
T Consensus       161 ~l~~~~~~~livD~a~~~g~~~~----~~~~~~~D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~  235 (376)
T TIGR01977       161 ELAQENGIFFILDAAQTAGVIPI----DMTELAIDMLAFTGHKGLLGPQ-GTGGLYIREGIKLKPLKSGGTGSHSALIDQ  235 (376)
T ss_pred             HHHHHcCCEEEEEhhhccCccCC----CchhcCCCEEEecccccccCCC-CceEEEEcCCcCcCceecCCCccccccccc
Confidence            99987 99999999997533211    1123345588889999765332 36766655442 1111100           


Q ss_pred             -------cCCCCCcHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHccCCCCccc-C----CCceEEEEEeCCCC
Q 014594          309 -------KQPYNVSVAAEVAACAALQN---PIYLEVKEALIKERERLFKLLKDVPFLNPY-P----SYSNFILCEVTSGM  373 (422)
Q Consensus       309 -------~~~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p----~~~~f~~~~~~~~~  373 (422)
                             ....+.+.....++.++++.   .+...++++.++..+++.+.|++++.+.+. +    ..+..+++.++ +.
T Consensus       236 ~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~-~~  314 (376)
T TIGR01977       236 PSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVE-GI  314 (376)
T ss_pred             cccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEEC-CC
Confidence                   01123445445555555532   222227788889999999999887655543 2    12567778886 56


Q ss_pred             CHHHHHHHHHhC-CcEEEeCCCC----------CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          374 DAKKLKDDLAKM-GVMIRHYNNK----------ELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       374 ~~~~~~~~L~~~-gI~v~~~~~~----------~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      +.+++.+.|.++ ||.++.+...          ...+.|||++.   +.++++++.++|+.
T Consensus       315 ~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~  375 (376)
T TIGR01977       315 DSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE  375 (376)
T ss_pred             CHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence            889999999866 9999876531          13579999986   45556666666654

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=99.95  E-value=1.8e-25  Score=220.78  Aligned_cols=316  Identities=16%  Similarity=0.111  Sum_probs=225.3

Q ss_pred             CCeEEcCCC-CCCCCCCHHHHHHHhcC-C-CCCC-------CC-CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           95 EDIVKIDAN-ENPYGPPPEVREALGQL-K-FPYI-------YP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        95 ~~~i~l~~~-~~~~~~~~~v~~al~~~-~-~~~~-------y~-~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      +++++|.+| .-.+..+|++++++.+. . ++..       +. .+...+|++++++++|.  +..++.+++++++..++
T Consensus        45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--~~~~~~~SG~~An~~ai  122 (406)
T PRK13393         45 REVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK--EAALLFTSGYVSNWAAL  122 (406)
T ss_pred             ccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC--CcEEEeCCcHHHHHHHH
Confidence            467888776 34556789999888762 1 2111       11 12357899999999985  45555555567888888


Q ss_pred             HHhcC--CCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---CCCeEEEEeCCCCccCcCCCHH
Q 014594          164 RCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDE  238 (422)
Q Consensus       164 ~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~e  238 (422)
                      ..+..  +||.|+.....|..........|++++.++.     .|++.+++.++.   +++++|++++++|++|.+.+.+
T Consensus       123 ~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~  197 (406)
T PRK13393        123 STLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-----NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPIA  197 (406)
T ss_pred             HHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-----CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCHH
Confidence            87655  7787777777777777777778888877762     367777776642   3678999999999999999999


Q ss_pred             HHHHHHcC-CCeEEEccCCccccCCC--c-hhhhhhc-CCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--
Q 014594          239 DLLKILEM-PILVVLDEAYTEFSGLE--S-RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--  311 (422)
Q Consensus       239 ~l~~i~~~-~~~li~Deay~~~~~~~--~-~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--  311 (422)
                      ++.++++. ++++|+||+|....+++  . .....+. .+.+++++||||.+|++|   ||+++++++++.+.....+  
T Consensus       198 ~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~~~~~~~l~~~~~~~~  274 (406)
T PRK13393        198 EICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGSAALCDFIRSFASGFI  274 (406)
T ss_pred             HHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCCHHHHHHHHHhCcCce
Confidence            99999987 99999999997333221  1 1111111 224678899999999888   9999999999988876554  


Q ss_pred             --CCCcHHHHHHHHHHccCCh-HHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHh-CCc
Q 014594          312 --YNVSVAAEVAACAALQNPI-YLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK-MGV  387 (422)
Q Consensus       312 --~~~~~~~~~aa~~~L~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~-~gI  387 (422)
                        .+.++..+.++.++|+..+ ....++++.++++++.+.|+++++ .+.++.++++.+.+++..++.++.+.|.+ +||
T Consensus       275 ~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~i~~v~~~~~~~~~~l~~~L~~~~Gi  353 (406)
T PRK13393        275 FTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKAGI-PHLPNPSHIVPVMVGDPVLCKQISDELLDRYGI  353 (406)
T ss_pred             ecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcCC-CcCCCCCCeEEEEeCCHHHHHHHHHHHHHhCCE
Confidence              2456677777877776422 212456678889999999988764 44466778877766432346788888886 699


Q ss_pred             EEEeCCCC---CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          388 MIRHYNNK---ELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       388 ~v~~~~~~---~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      .++++..+   ...+++||++.   +.++++++.++|+++
T Consensus       354 ~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~  393 (406)
T PRK13393        354 YVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEI  393 (406)
T ss_pred             EEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            99976542   23478999986   677778887777653

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=99.95  E-value=6e-26  Score=222.45  Aligned_cols=313  Identities=19%  Similarity=0.143  Sum_probs=217.5

Q ss_pred             EcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc----------chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhc
Q 014594           99 KIDANENPYGPPPEVREALGQL-KFPYIYPDP----------ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL  167 (422)
Q Consensus        99 ~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~~----------~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~  167 (422)
                      .|+.+... +.++.+++++.+. .....+|..          ...++|+.+++++|+++++|++|+|++++++.++..++
T Consensus         2 yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~   80 (379)
T TIGR03402         2 YLDNNATT-RVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSAL   80 (379)
T ss_pred             cCCCcCCC-CCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHH
Confidence            34444333 3467888888752 211222210          14578899999999998999999999999999988764


Q ss_pred             ---CCCCEEEEcCCCchhHHH---HHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594          168 ---DPGDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (422)
Q Consensus       168 ---~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~  241 (422)
                         .+||+|++....|+.+..   .++..|++++.++.++++.+|++++++.++ ++++++++++++||||.++|.+++.
T Consensus        81 ~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~-~~~~lv~i~~~~n~tG~~~~~~~I~  159 (379)
T TIGR03402        81 AAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAIT-DDTALVSVMWANNETGTIFPIEEIG  159 (379)
T ss_pred             HhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcC-CCcEEEEEEcccCCeeecccHHHHH
Confidence               456889999888876543   334479999999977777899999999997 6899999999999999999999999


Q ss_pred             HHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHH-H-HH-----HHhcCCCC
Q 014594          242 KILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII-E-YL-----WRAKQPYN  313 (422)
Q Consensus       242 ~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~-~-~l-----~~~~~~~~  313 (422)
                      ++++. |+++++|++|....    ....+...+-++++.|.+|.+|.+|  +|+++++++.. . .+     ......++
T Consensus       160 ~l~~~~g~~vivD~~~~~g~----~~~~~~~~~~D~~~~s~~K~~gp~G--~g~l~v~~~~~~~p~~~g~~~~~~~~~gt  233 (379)
T TIGR03402       160 EIAKERGALFHTDAVQAVGK----IPIDLKEMNIDMLSLSGHKLHGPKG--VGALYIRKGTRFRPLLRGGHQERGRRAGT  233 (379)
T ss_pred             HHHHHcCCEEEEECcccccc----cccCcccCCCCEEEEcHHHcCCCCc--eEEEEECCCCCCCCcccCCccCCCcCCCC
Confidence            99987 99999999997421    1111222344577888899766556  78888765431 0 00     00112345


Q ss_pred             CcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHcc-CCCCcccCC-C---ceEEEEEeCCCCCHHHHHHHHHhCC
Q 014594          314 VSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKD-VPFLNPYPS-Y---SNFILCEVTSGMDAKKLKDDLAKMG  386 (422)
Q Consensus       314 ~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~-~~~~~~~p~-~---~~f~~~~~~~~~~~~~~~~~L~~~g  386 (422)
                      .+.....++.++++. .++++ ..+++++.++++.+.|++ ++.+.+... .   ...+.+.++ +.+.+++...|.++|
T Consensus       234 ~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~g  312 (379)
T TIGR03402       234 ENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFE-YIEGEAILLLLDMEG  312 (379)
T ss_pred             ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEec-CCCHHHHHHhhccCC
Confidence            666666656555543 24556 778899999999999985 665544321 1   123333333 457889999998999


Q ss_pred             cEEEeCCCC--C-----------------CCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          387 VMIRHYNNK--E-----------------LKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       387 I~v~~~~~~--~-----------------~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      |.++.+..+  +                 ..+.+|+|+.   +.+|+|++.++|+.
T Consensus       313 I~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~  368 (379)
T TIGR03402       313 ICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPP  368 (379)
T ss_pred             EEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence            999976541  0                 1478999986   45566666666654

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=99.95  E-value=6.4e-26  Score=222.88  Aligned_cols=314  Identities=17%  Similarity=0.239  Sum_probs=215.4

Q ss_pred             CCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           92 RKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        92 ~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~----~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      .+++.++|+..+.  +.+ ..+|++.+++.+ +..    +..|..+...++.+++++..+  .+++++++|+++|++.++
T Consensus        28 ~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sGseA~~~al  105 (389)
T PRK01278         28 EDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNLYRIPEQERLAERLVENSF--ADKVFFTNSGAEAVECAI  105 (389)
T ss_pred             CCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccccCChHHHHHHHHHHhhCC--CCEEEEcCCcHHHHHHHH
Confidence            4577899998752  222 357888888876 221    122334445678888888764  468999999999999998


Q ss_pred             HHh----cCCCC----EEEEcCCCchhHHHHHHHcCCEEEEe----cCCCCCC----CCHHHHHHHhhcCCCeEEEEeCC
Q 014594          164 RCV----LDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKV----PRKSDFS----LNVELIADAVEREKPKCIFLTSP  227 (422)
Q Consensus       164 ~~l----~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v----~~~~~~~----~d~~~l~~~i~~~~~~~i~l~~p  227 (422)
                      +..    ..+||    +|++.++.|+.+...+...+......    +..+++.    .|++.+++.++ +++++|+++.+
T Consensus       106 ~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~avivep~  184 (389)
T PRK01278        106 KTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAIT-PNTAAILIEPI  184 (389)
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhC-CCeEEEEEecc
Confidence            865    45665    89999999998776665544432221    1112222    58999999997 58999999988


Q ss_pred             CCccC-cCCCHHHHHHHHcC----CCeEEEccCCccccCCCchhh--hhhcCCcEEEEccChhhhccccccceeeecCHH
Q 014594          228 NNPDG-SIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (422)
Q Consensus       228 ~NPtG-~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~  300 (422)
                      +||+| .+++.+.+++|.+.    |+++|+||+|.+|...+....  .....+.   +.||||.++ +|+|+||++++++
T Consensus       185 ~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd---i~t~sK~l~-~G~~ig~~~~~~~  260 (389)
T PRK01278        185 QGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPD---IMAVAKGIG-GGFPLGACLATEE  260 (389)
T ss_pred             cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCC---EEEEehhcc-CCcceEEEEEcHH
Confidence            99999 77788888777654    999999999998764433211  1111122   357899998 8999999999999


Q ss_pred             HHHHHHHhcC--CCCCcHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHc----cCC-CCcccCCCceEEEEEeC
Q 014594          301 IIEYLWRAKQ--PYNVSVAAEVAACAALQN---PIYLEVKEALIKERERLFKLLK----DVP-FLNPYPSYSNFILCEVT  370 (422)
Q Consensus       301 ~~~~l~~~~~--~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~~~L~----~~~-~~~~~p~~~~f~~~~~~  370 (422)
                      +++.+.....  .++.+++.+.++.++|+.   +++.   ++++++.+++.+.|+    ..+ .+......|.+++++++
T Consensus       261 ~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~---~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~  337 (389)
T PRK01278        261 AAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFL---DNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCV  337 (389)
T ss_pred             HHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHH---HHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEe
Confidence            8887754433  367889999999887753   2232   333333333333333    233 22223456788888884


Q ss_pred             CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          371 SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       371 ~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                        .++.++++.|+++||.+.++.    .+++||+++...+.+++.+++++|
T Consensus       338 --~~~~~~~~~l~~~GV~~~p~~----~~~lR~~p~~~~~~~~i~~~l~~l  382 (389)
T PRK01278        338 --VPNRDLVQALRDEGLLTVGAG----DNVVRLLPPLIITEEEIDEALERL  382 (389)
T ss_pred             --cCHHHHHHHHHHCCeEEeecC----CCEEEEeCCcccCHHHHHHHHHHH
Confidence              367899999999999999874    589999975322235566666654

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.95  E-value=1.4e-25  Score=221.40  Aligned_cols=317  Identities=17%  Similarity=0.201  Sum_probs=218.4

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCC-C-----CcchHH----HHHHHHHHcCCCCCCEEEeCCHH-HHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQLKFPYIY-P-----DPESRR----LRAALAKDSGLESDHILVGCGAD-ELIDLIM  163 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y-~-----~~~~~~----lr~~la~~~~~~~~~i~~~~G~~-~al~~~~  163 (422)
                      ..++.++.+.+++++|+.+.++..+......| +     ..|..+    +++.+++++|++.++++++++++ ++...+.
T Consensus        20 ~~~~~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~   99 (398)
T cd00613          20 QSMSFLGSGTYKHNPPAVIKRNILENEFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGL   99 (398)
T ss_pred             cCcccccccccCCcCcHHHHHHhccccCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHH
Confidence            34589999999998888877766655111234 2     234444    55555556788766787777555 4545555


Q ss_pred             HHhcCC--CCEEEEcCCCchhHHHHHHHcC----CEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594          164 RCVLDP--GDKIVDCPPTFTMYEFDAAVNG----AAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (422)
Q Consensus       164 ~~l~~~--gd~Vl~~~p~y~~~~~~~~~~g----~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (422)
                      .+++.+  ||+|+++.|.|+.+...+...|    ++++.++.++++.+|++++++.+. +++++|++++|+ |+|.+.+.
T Consensus       100 ~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~t~~viv~~~~-~~G~~~~~  177 (398)
T cd00613         100 AAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVS-EEVAALMVQYPN-TLGVFEDL  177 (398)
T ss_pred             HHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcC-CCeEEEEEECCC-CCceecch
Confidence            556666  9999999999998887777776    899999976667899999999997 689999999985 89999886


Q ss_pred             -HHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccc----cccceeeecCHHHHHHHHHh---
Q 014594          238 -EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIEYLWRA---  308 (422)
Q Consensus       238 -e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----G~r~G~i~~~~~~~~~l~~~---  308 (422)
                       +++.++|+. |+++|+|++|....... .   ....+.++++.|++|.+ ++    |+|+||+++++++++.+...   
T Consensus       178 l~~i~~la~~~g~~livD~~~~~~~~~~-~---~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~  252 (398)
T cd00613         178 IKEIADIAHSAGALVYVDGDNLNLTGLK-P---PGEYGADIVVGNLQKTG-VPHGGGGPGAGFFAVKKELVRFLPGRLVG  252 (398)
T ss_pred             HHHHHHHHHhcCCEEEEEeccccccCCC-C---hHHcCCCEEEeeccccC-CCCCCCCCceeEEEEhhhhHhhCCCCeec
Confidence             999999987 99999999876432111 1   11234569999999987 45    78999999998887764110   


Q ss_pred             --------------------------cC--CCCCcHHHHHHHHHHcc--CChHHH-HHHHHHHHHHHHHHHHccCCCCcc
Q 014594          309 --------------------------KQ--PYNVSVAAEVAACAALQ--NPIYLE-VKEALIKERERLFKLLKDVPFLNP  357 (422)
Q Consensus       309 --------------------------~~--~~~~~~~~~~aa~~~L~--~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~  357 (422)
                                                ..  .++.+.....++...+.  ..+..+ ++++++++++++.+.|++++... 
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-  331 (398)
T cd00613         253 VTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVL-  331 (398)
T ss_pred             cccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-
Confidence                                      00  12222233322322222  233455 88899999999999999987544 


Q ss_pred             cCCCceE--EEEEeCC--CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594          358 YPSYSNF--ILCEVTS--GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       358 ~p~~~~f--~~~~~~~--~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  420 (422)
                      .+.+..+  ++++++.  +.++.++++.|.++||.+.... ....+.+|+++....+.+++++.++.
T Consensus       332 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~~-~~~~~~lRis~~~~~t~edid~~~~~  397 (398)
T cd00613         332 PFNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMY-LPVDGTLMIEPTETETKEELDALLEA  397 (398)
T ss_pred             cCCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCccccccc-cCCCCeEEEEcCCCCCHHHHHHHHHh
Confidence            2333333  5777764  3467889999999999875422 22357999998643333555555543

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>PRK06234 methionine gamma-lyase; Provisional

Probab=99.95  E-value=1.5e-25  Score=219.78  Aligned_cols=270  Identities=18%  Similarity=0.214  Sum_probs=201.3

Q ss_pred             CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHH----HHHHHcCCEEEEecC
Q 014594          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPR  199 (422)
Q Consensus       124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~  199 (422)
                      .+||+++..+|++++++++|.  +++++++|+++++..++.+++++||+|+++.|.|..+.    ..++..|++++.++.
T Consensus        59 ~r~~~p~~~~Le~~iA~~~g~--~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~  136 (400)
T PRK06234         59 SRLGNPTSTEVENKLALLEGG--EAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDT  136 (400)
T ss_pred             cCCCCccHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECC
Confidence            456788999999999999995  36788899999999999989999999999999886443    344668999999874


Q ss_pred             CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCCchhhhhhcCCcEE
Q 014594          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLI  276 (422)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i  276 (422)
                           .|+++++++++ +++|+|++++|+||||.+.+.+++.++++.   |+++|+|++|..+.... ..    ..+.++
T Consensus       137 -----~d~e~l~~~i~-~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~-~l----~~g~Di  205 (400)
T PRK06234        137 -----SNLEEVRNALK-ANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQR-PL----QLGADV  205 (400)
T ss_pred             -----CCHHHHHHHhc-cCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCC-ch----hhCCcE
Confidence                 27999999997 689999999999999999999999999986   89999999998654321 11    224569


Q ss_pred             EEccChhhhccccccc-eeeecCHHHHHHHHHhc----CCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHc
Q 014594          277 VLRTFSKRAGLAGLRV-GYGAFPLSIIEYLWRAK----QPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLK  350 (422)
Q Consensus       277 ~~~S~SK~~~~~G~r~-G~i~~~~~~~~~l~~~~----~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~  350 (422)
                      ++.|+||.++.+|+|+ ||+++++++++.+....    ....+++.....+...|+.   +. +.++..++..++.+.|+
T Consensus       206 vv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~t---l~~r~~~~~~na~~~a~~L~  282 (400)
T PRK06234        206 VVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKT---LQIRMEKHCKNAMKVAKFLE  282 (400)
T ss_pred             EEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc---HHHHHHHHHHHHHHHHHHHH
Confidence            9999999998888775 99999999888876421    1245666666666555543   33 66667788888999998


Q ss_pred             cCCCCc--ccCC----------------CceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCC-----------------
Q 014594          351 DVPFLN--PYPS----------------YSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNN-----------------  394 (422)
Q Consensus       351 ~~~~~~--~~p~----------------~~~f~~~~~~~~-~~~~~~~~~L~~~gI~v~~~~~-----------------  394 (422)
                      +.+.+.  .+|.                .|..+.+++.++ ....+|.+.|.-.++.+.-|+.                 
T Consensus       283 ~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~  362 (400)
T PRK06234        283 SHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVKLATLAVSLGDAETLIQHPASMTHSPYTA  362 (400)
T ss_pred             cCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhCCcceEeccCCCCCceecCCccCCCCCCCH
Confidence            765432  1221                244667788532 2345666777644544433321                 


Q ss_pred             ------CCCCCeEEEEecChh
Q 014594          395 ------KELKGYVRVSVGKPE  409 (422)
Q Consensus       395 ------~~~~~~iRis~~~~~  409 (422)
                            .-.++.||||++.+.
T Consensus       363 ~~~~~~gi~~~l~R~svGlE~  383 (400)
T PRK06234        363 EERKEAGISDGLVRLSVGLED  383 (400)
T ss_pred             HHHHhcCCCCCeEEEEeCCCC
Confidence                  011468999999754

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.95  E-value=2e-25  Score=223.25  Aligned_cols=314  Identities=18%  Similarity=0.206  Sum_probs=224.4

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcCCCCCCC-C-----Ccc----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQLKFPYIY-P-----DPE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y-~-----~~~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~  165 (422)
                      ..+.++.|..++..+..+.+++........| |     ..+    ..++++++++++|++.+++++++|++++++.++.+
T Consensus        69 ~~~~lg~g~~~~~~p~~~~~~~~~~~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a  148 (447)
T PRK00451         69 YPSFLGAGAYDHYIPAVVDHIISRSEFYTAYTPYQPEISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMA  148 (447)
T ss_pred             CcccCcccccCCcCcHHHHHHHhchhHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHH
Confidence            5678888888888777776665442211224 3     222    23455777888999888999999999999999888


Q ss_pred             hc-CCCCEEEEcCCCchhHHHHHHH----cCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHH
Q 014594          166 VL-DPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL  240 (422)
Q Consensus       166 l~-~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l  240 (422)
                      +. .+||+|+++.+.|+.+...++.    .|++++.++.+++ .+|++++++.++ +++++|++++| ||||.+.+.+++
T Consensus       149 ~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~-~~t~~v~l~~p-n~tG~v~~l~~I  225 (447)
T PRK00451        149 VRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVD-DDTAAVVVQYP-NFFGVIEDLEEI  225 (447)
T ss_pred             HHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcC-CCeEEEEEECC-CCCCeeCCHHHH
Confidence            74 7899999999999887766543    7999999998777 899999999997 68999999999 899999999999


Q ss_pred             HHHHcC-CCeEEE--ccCCccccCCCchhhhhhcCCcEEEEc---cChhhhccccccceeeecCHHHHHHHH--------
Q 014594          241 LKILEM-PILVVL--DEAYTEFSGLESRMEWVKKHDNLIVLR---TFSKRAGLAGLRVGYGAFPLSIIEYLW--------  306 (422)
Q Consensus       241 ~~i~~~-~~~li~--Deay~~~~~~~~~~~~~~~~~~~i~~~---S~SK~~~~~G~r~G~i~~~~~~~~~l~--------  306 (422)
                      .++++. |+++++  |.+...+..      .....+.++++.   +|||.++++|+|+||+++++++++.+.        
T Consensus       226 ~~~a~~~~~~~iv~~d~~~~g~~~------~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~  299 (447)
T PRK00451        226 AEIAHAGGALFIVGVDPVSLGLLK------PPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETV  299 (447)
T ss_pred             HHHHHHCCCEEEEEcChHHhccCC------CcccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeec
Confidence            999997 888887  433221110      112344456655   677888888999999999999888741        


Q ss_pred             --------------------HhcCCCCC--cHHHH-HHHHHHcc--CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC
Q 014594          307 --------------------RAKQPYNV--SVAAE-VAACAALQ--NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPS  360 (422)
Q Consensus       307 --------------------~~~~~~~~--~~~~~-~aa~~~L~--~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~  360 (422)
                                          +.....+.  +...+ .++..++.  ..++++ +++++.++++++.+.|++++++.+. +
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~  378 (447)
T PRK00451        300 DADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELF-D  378 (447)
T ss_pred             ccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec-C
Confidence                                11111222  11222 22322222  234556 8899999999999999998766654 4


Q ss_pred             CceEEE--EEeCCCCCHHHHHHHHHhCCcEEE-eCCC--CCCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014594          361 YSNFIL--CEVTSGMDAKKLKDDLAKMGVMIR-HYNN--KELKGYVRVSV---GKPEHTDALMECLMHL  421 (422)
Q Consensus       361 ~~~f~~--~~~~~~~~~~~~~~~L~~~gI~v~-~~~~--~~~~~~iRis~---~~~~~~~~l~~al~~l  421 (422)
                      +++|.+  ++++  .+..++.+.|.++||.+. ++..  +...+++|+++   .+.++++++.++|+.+
T Consensus       379 ~~~~~~~~v~~~--~~~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~  445 (447)
T PRK00451        379 GPFFNEFVVRLP--KPAEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEV  445 (447)
T ss_pred             CCeEEEEEEecC--CCHHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence            445544  5553  467899999998887742 2222  23457999996   5677888888888764

>PRK06460 hypothetical protein; Provisional

Probab=99.95  E-value=1.5e-25  Score=218.08  Aligned_cols=216  Identities=14%  Similarity=0.172  Sum_probs=166.9

Q ss_pred             CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC----chhHHHHHHHcCCEEEEecCCC
Q 014594          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT----FTMYEFDAAVNGAAVVKVPRKS  201 (422)
Q Consensus       126 y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~----y~~~~~~~~~~g~~~~~v~~~~  201 (422)
                      +.++...+|++++++++|.+. .+++ +++++++..++.+++++||+|+++.|.    |..+...++..|+++..++.+ 
T Consensus        42 ~~~p~~~~L~~~lA~l~g~~~-~v~~-~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~-  118 (376)
T PRK06460         42 EANPTVLELTKKIVELENAEM-GVAF-SSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPG-  118 (376)
T ss_pred             CCCccHHHHHHHHHHHhCCCc-EEEe-CCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCC-
Confidence            356778999999999999753 4555 555689999999999999999998754    456666778899999888743 


Q ss_pred             CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEcc
Q 014594          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT  280 (422)
Q Consensus       202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S  280 (422)
                          +.+.+++.++ +++|+|++++|+||||.+++.+++.++++. |+++|+||+|..+... ..   . ..+.++++.|
T Consensus       119 ----~~~~l~~~~~-~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~-~~---l-~~~~divv~S  188 (376)
T PRK06460        119 ----SDNIIEKAKS-KRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPINQ-KP---L-ELGADIVVHS  188 (376)
T ss_pred             ----CHHHHHHhcC-CCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccccC-Ch---h-hcCCCEEEee
Confidence                2234444444 689999999999999999999999999987 9999999999854211 11   1 2345699999


Q ss_pred             Chhhhcc-ccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594          281 FSKRAGL-AGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFL  355 (422)
Q Consensus       281 ~SK~~~~-~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~  355 (422)
                      +||.++. .+.++||+++++++++.+.+.+.+++.+... ..+..+++..+|++ +.+++.++++++.+.|++++.+
T Consensus       189 ~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~~~~~-~~a~~~l~~~~~l~~r~~~~~~n~~~l~~~L~~~p~v  264 (376)
T PRK06460        189 ASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGTSLDP-HAAYLTLRGIKTLKIRMDVINRNAEQIAEFLEGHPKV  264 (376)
T ss_pred             cceeccCCCCceEEEEecCHHHHHHHHHHHHhcCCCCCH-HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence            9998752 2367999999999999998777666544222 34455566668888 8899999999999999987644

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=99.95  E-value=2.4e-25  Score=220.81  Aligned_cols=317  Identities=16%  Similarity=0.145  Sum_probs=219.7

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCC------Cc-chHHH----HHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-K--FPYIYP------DP-ESRRL----RAALAKDSGLESDHILVGCGADELID  160 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y~------~~-~~~~l----r~~la~~~~~~~~~i~~~~G~~~al~  160 (422)
                      .+.++|..++|+  .+|.+++++... .  ++.+++      .. ....+    |+.+++++|.+..+|++++| ++++.
T Consensus        25 ~~~~~l~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~~~sg-t~al~  101 (416)
T PRK00011         25 EEHIELIASENF--VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANVQPHSG-SQANA  101 (416)
T ss_pred             hcCeeeecccCc--CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceeeecCCc-hHHHH
Confidence            456999999998  578999998652 1  111111      11 12233    44788999988777777665 67899


Q ss_pred             HHHHHhcCCCCEEEEcCCCchhHHH-----HHHHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594          161 LIMRCVLDPGDKIVDCPPTFTMYEF-----DAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (422)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~-----~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~  234 (422)
                      .++.+++++||+|+++.|+|..+..     .....|++++.++.+ +++.+|++++++.+++.++++|++++++|  |..
T Consensus       102 ~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~~--~~~  179 (416)
T PRK00011        102 AVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGASAY--SRP  179 (416)
T ss_pred             HHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEECCCcC--CCc
Confidence            9999999999999999999975421     112346788888865 45789999999999755899999876654  567


Q ss_pred             CCHHHHHHHHcC-CCeEEEccCCccc-cCCCchhhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcCC
Q 014594          235 INDEDLLKILEM-PILVVLDEAYTEF-SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP  311 (422)
Q Consensus       235 ~~~e~l~~i~~~-~~~li~Deay~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~  311 (422)
                      .+.+++.++++. |+++|+|++|... ...+.....+.  ..++++.|+||.+  +|.|.||++++ +++++++.....+
T Consensus       180 ~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~~di~~~S~~K~l--~g~~gg~i~~~~~~~~~~l~~~~~~  255 (416)
T PRK00011        180 IDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--HADVVTTTTHKTL--RGPRGGLILTNDEELAKKINSAVFP  255 (416)
T ss_pred             cCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--CCcEEEecCCcCC--CCCCceEEEeCCHHHHHHHHHHhCc
Confidence            899999999987 9999999998632 22111111111  3358899999965  78899999995 6888888776654


Q ss_pred             CCC---cHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccC--CCceEEEEEeCC-CCCHHHHHHHH
Q 014594          312 YNV---SVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYP--SYSNFILCEVTS-GMDAKKLKDDL  382 (422)
Q Consensus       312 ~~~---~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p--~~~~f~~~~~~~-~~~~~~~~~~L  382 (422)
                      +..   ....+.++..++..  .++++ .+++++++++++.+.|+++++ .+.+  ..++++|+.+++ +.+.+++.+.|
T Consensus       256 ~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L  334 (416)
T PRK00011        256 GIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGF-RVVSGGTDNHLVLVDLRSKGLTGKEAEAAL  334 (416)
T ss_pred             cccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCC-eeeecCCCCeEEEEeCcccCCCHHHHHHHH
Confidence            322   22222222222211  23455 888999999999999998863 4333  345889999853 34778899999


Q ss_pred             HhCCcEEEeCCC------CCCCCeEEEEec-------ChhhHHHHHHHHhhh
Q 014594          383 AKMGVMIRHYNN------KELKGYVRVSVG-------KPEHTDALMECLMHL  421 (422)
Q Consensus       383 ~~~gI~v~~~~~------~~~~~~iRis~~-------~~~~~~~l~~al~~l  421 (422)
                      .++||.++.+..      +..+.++|++..       +.++++++.++++++
T Consensus       335 ~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~  386 (416)
T PRK00011        335 EEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADV  386 (416)
T ss_pred             HHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHH
Confidence            999999984321      223567999642       256778888887753

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=99.95  E-value=6.6e-25  Score=214.51  Aligned_cols=305  Identities=19%  Similarity=0.180  Sum_probs=222.4

Q ss_pred             CCCHHHHHHHhc-CC----CCCCCCCcc--hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcC----CCCEEEEc
Q 014594          108 GPPPEVREALGQ-LK----FPYIYPDPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD----PGDKIVDC  176 (422)
Q Consensus       108 ~~~~~v~~al~~-~~----~~~~y~~~~--~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~----~gd~Vl~~  176 (422)
                      ++.|.+.+++.+ ..    ....|+...  ..++++++++++|.+++++++++|+++++..+++++.+    ++|+|++.
T Consensus        31 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~  110 (371)
T PRK13520         31 EPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVP  110 (371)
T ss_pred             CchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEec
Confidence            356777777754 21    112233322  36799999999998877899999999999999877654    57899999


Q ss_pred             CCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccC
Q 014594          177 PPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA  255 (422)
Q Consensus       177 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Dea  255 (422)
                      .+.|..+...++..|++++.++.++++.+|++++++.++ +++++|++++++|+||.+.|.+++.++++. |+++++|++
T Consensus       111 ~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a  189 (371)
T PRK13520        111 ESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLID-DNTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAA  189 (371)
T ss_pred             CcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHh-hCCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEec
Confidence            999999988888899999999987777899999999997 578888888899999999999999999987 999999999


Q ss_pred             CccccCC--Cchh-hhhhcCCcEEEEccChhhhccccccceeeec-CHHHHHHHHHhcCCC-----------CCcHHHHH
Q 014594          256 YTEFSGL--ESRM-EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPY-----------NVSVAAEV  320 (422)
Q Consensus       256 y~~~~~~--~~~~-~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~~~-----------~~~~~~~~  320 (422)
                      |..+...  .... ......+...+..|.+| |+++|.++|+++. ++++++.+... .++           +.+.....
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K-~~~a~~~~G~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~gt~~~~~~~  267 (371)
T PRK13520        190 FGGFVIPFLDDPPNFDFSLPGVDSITIDPHK-MGLAPIPAGGILFRDESYLDALAVD-TPYLTSKKQATLTGTRSGAGVA  267 (371)
T ss_pred             chhHHHHhhcCCCCccccCCCCceEEECCcc-ccCccCCceEEEEcCHHHHHhhccc-CccccCCCCcceEeeccChHHH
Confidence            9865421  1100 00111222344557778 7777889998775 66677766421 111           12333445


Q ss_pred             HHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCC
Q 014594          321 AACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKEL  397 (422)
Q Consensus       321 aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~  397 (422)
                      ++.++|+.  .+..+ .+++..++++++.+.|+++++..+.+...+++.++++   +.+++.+.|.++||.++.+.   .
T Consensus       268 ~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~v~~~~~---~~~~v~~~L~~~gi~v~~~~---~  341 (371)
T PRK13520        268 ATYAVMKYLGREGYRKVVERCMENTRWLAEELKERGFEPVIEPVLNIVAFDDP---NPDEVREKLRERGWRVSVTR---C  341 (371)
T ss_pred             HHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCCCEEecCCCceEEEEecC---CHHHHHHHHHHCCceeccCC---C
Confidence            55555543  22334 7888999999999999988542144556778888875   57899999999999998764   2


Q ss_pred             CCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          398 KGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       398 ~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      .+++|||+.   +.++++++.++++.+
T Consensus       342 ~~~iRis~~~~~t~edi~~~~~~l~~~  368 (371)
T PRK13520        342 PEALRIVCMPHVTREHIENFLEDLKEV  368 (371)
T ss_pred             CCEEEEEEECCCCHHHHHHHHHHHHHH
Confidence            468999985   667777777777653

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=99.95  E-value=2.9e-25  Score=218.49  Aligned_cols=312  Identities=15%  Similarity=0.172  Sum_probs=218.4

Q ss_pred             CCCCCeEEcCCCCCC--C-CCCHHHHHHHhc-CCC---CC-CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           92 RKPEDIVKIDANENP--Y-GPPPEVREALGQ-LKF---PY-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        92 ~~~~~~i~l~~~~~~--~-~~~~~v~~al~~-~~~---~~-~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      .++++++|+..+...  + ..+|++.+++.+ +..   .. .+..+...+|.++++++.+.  +.+++++++++|++.++
T Consensus        37 ~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~SGseA~e~Al  114 (396)
T PRK04073         37 PEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLTGK--DMVLPMNTGAEAVETAI  114 (396)
T ss_pred             CCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcCCC--CeEEEcCChHHHHHHHH
Confidence            457889999777432  3 257888888865 321   11 12334456788999988763  68999999999999999


Q ss_pred             HHhcC---------CC-CEEEEcCCCchhHHHHH-HHcCCE------------EEEecCCCCCCCCHHHHHHHhhcCCCe
Q 014594          164 RCVLD---------PG-DKIVDCPPTFTMYEFDA-AVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPK  220 (422)
Q Consensus       164 ~~l~~---------~g-d~Vl~~~p~y~~~~~~~-~~~g~~------------~~~v~~~~~~~~d~~~l~~~i~~~~~~  220 (422)
                      +....         +| ++|+....+|++....+ ...+..            +..++     ..|++.+++.+. ++++
T Consensus       115 k~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~-~~~~  188 (396)
T PRK04073        115 KAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIP-----YGDLEALKAAIT-PNTA  188 (396)
T ss_pred             HHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeC-----CCCHHHHHHhcc-cCeE
Confidence            96531         34 67888888786543322 222211            11222     127899999986 6899


Q ss_pred             EEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhh--hhhcCCcEEEEccChhhhccccccce
Q 014594          221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVG  293 (422)
Q Consensus       221 ~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~~~G~r~G  293 (422)
                      +|++++++||+|.+++    .+++.++|+. |+++|+||+|.+|...+....  ..+..++   +.+|||.+|.+|+|+|
T Consensus       189 ~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pd---i~~~sK~lg~gg~~ig  265 (396)
T PRK04073        189 AFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPD---MYILGKALGGGVFPIS  265 (396)
T ss_pred             EEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCC---EEEecccccCCCCcce
Confidence            9999999999999998    4567777765 999999999998765443221  1111222   3357999998889999


Q ss_pred             eeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCC--CcccCCCceEEEEEe
Q 014594          294 YGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPF--LNPYPSYSNFILCEV  369 (422)
Q Consensus       294 ~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~p~~~~f~~~~~  369 (422)
                      |+++++++++.+...  ...|+.+++++.++.++|+..+-....++.+++++++.+.|++++.  +...++.|+|+++++
T Consensus       266 ~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~l~~~~i~~~~~~g~~~~~~~  345 (396)
T PRK04073        266 CVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEIDNPMIKEVRGRGLFIGVEL  345 (396)
T ss_pred             EEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhcCCcccceecceEEEEEEe
Confidence            999999999887643  2347789999999999986311111556667778888888887632  333456788999998


Q ss_pred             CCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe---cChhhHHHHHHHHhh
Q 014594          370 TSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV---GKPEHTDALMECLMH  420 (422)
Q Consensus       370 ~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~---~~~~~~~~l~~al~~  420 (422)
                      +  .++.++.+.|.++||.+.+..    +++|||++   .+.++++++.++|++
T Consensus       346 ~--~~~~~~~~~l~~~Gv~~~~~~----~~~iRi~p~l~~t~e~i~~~~~~l~~  393 (396)
T PRK04073        346 N--EPARPYCEALKEEGLLCKETH----ETVIRFAPPLVITKEELDWAFEKIKA  393 (396)
T ss_pred             c--chHHHHHHHHHHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHH
Confidence            5  357889999999999998643    47999995   355556666666554

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=99.94  E-value=4.7e-25  Score=214.74  Aligned_cols=236  Identities=16%  Similarity=0.147  Sum_probs=179.2

Q ss_pred             EEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcC
Q 014594           98 VKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCP  177 (422)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~  177 (422)
                      |+++++.++.+..+.     ....+ .+|+++...+|+++++++.+  .+++++++|+++++..++.+++++||+|+++.
T Consensus        26 i~~ss~~~~~~~~~~-----~~~~Y-~R~~~p~~~~le~~lA~l~g--~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~   97 (382)
T TIGR02080        26 IYLSTTYNFTGFNEP-----RAYDY-SRSGNPTRDLLQQALAELEG--GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPH   97 (382)
T ss_pred             eeCCceeEeCCcCcc-----CCCcc-cCCCCchHHHHHHHHHHHhC--CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcC
Confidence            777777765543211     11223 67788889999999999998  46899999999999999999999999999999


Q ss_pred             CCchhHHHH----HHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEE
Q 014594          178 PTFTMYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVL  252 (422)
Q Consensus       178 p~y~~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~  252 (422)
                      |+|......    ....|.++..++     ..|++.++++++ +++|+|++++|+||||.+++.+++.++++. |+++|+
T Consensus        98 p~y~~~~~~~~~~~~~~~~~v~~~d-----~~d~~~l~~ai~-~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvv  171 (382)
T TIGR02080        98 DCYGGTYRLLNALAKKGCFRVLFVD-----QGDEQALRAALA-QKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVV  171 (382)
T ss_pred             CCcHHHHHHHHHHHhhcCeEEEEEC-----CCCHHHHHHhcC-cCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEE
Confidence            999853332    222355665554     247999999997 689999999999999999999999999987 999999


Q ss_pred             ccCCccccCCCchhhhhhcCCcEEEEccChhhhc-cccccceeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccC
Q 014594          253 DEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (422)
Q Consensus       253 Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~r~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~  328 (422)
                      |++|..+.... ...    .+..++++|+||.++ .+|++.|++++ ++++++++...+..  ..++++.+..+...+  
T Consensus       172 D~a~~~~~~~~-pl~----~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l--  244 (382)
T TIGR02080       172 DNTFLSPALQN-PLA----LGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGL--  244 (382)
T ss_pred             ECCCcccccCC-chh----hCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHccc--
Confidence            99998654322 111    123488999999875 46789999877 67888888765544  456666665554433  


Q ss_pred             ChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594          329 PIYLE-VKEALIKERERLFKLLKDVPFL  355 (422)
Q Consensus       329 ~~~~~-~~~~~~~~~~~l~~~L~~~~~~  355 (422)
                       +.+. +.++..++...+.+.|++.+.+
T Consensus       245 -~tl~~R~~~~~~na~~~a~~L~~~p~v  271 (382)
T TIGR02080       245 -RTLVARMRLQQRNAQAIVEYLQTQPLV  271 (382)
T ss_pred             -chHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence             3455 7778889999999999987654

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>TIGR02006 IscS cysteine desulfurase IscS

Probab=99.94  E-value=1.1e-24  Score=214.90  Aligned_cols=312  Identities=15%  Similarity=0.117  Sum_probs=217.5

Q ss_pred             EEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCC-----------cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594           98 VKIDANENPYGPPPEVREALGQL-KFPYIYPD-----------PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (422)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~-----------~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~  165 (422)
                      +.|+.+... +.++.+++++.+. ......|.           ....++|+.+++++|+++++|++++|++++++.++..
T Consensus         5 ~yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~   83 (402)
T TIGR02006         5 IYLDYAATT-PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNLAIKG   83 (402)
T ss_pred             EEeeCCcCC-CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHH
Confidence            678776654 4578888887652 11011111           1245789999999999989999999999999998876


Q ss_pred             hc----CCCCEEEEcCCCchhHHHHH---HHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHH
Q 014594          166 VL----DPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (422)
Q Consensus       166 l~----~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e  238 (422)
                      +.    ++||+|+++.+.|..+...+   +..|++++.++.++++.+|++.+++.++ ++++++++++++||||.+.+.+
T Consensus        84 l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-~~~~lv~v~~~~n~tG~~~~~~  162 (402)
T TIGR02006        84 IAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIR-DDTILVSIMHVNNEIGVIQDIA  162 (402)
T ss_pred             HHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcC-CCCEEEEEECCCcCceecccHH
Confidence            53    68999999999998654433   4469999999987777899999999997 6799999999999999999999


Q ss_pred             HHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh---------
Q 014594          239 DLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---------  308 (422)
Q Consensus       239 ~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~---------  308 (422)
                      +|.++++. |+++++|++++.... +   ..+...+.++++.|.+|.+|.+|  +|+++++++....+...         
T Consensus       163 ~I~~l~~~~g~~livD~a~a~g~~-~---~~~~~~~~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~g~~~~~~  236 (402)
T TIGR02006       163 AIGEICRERKVFFHVDAAQSVGKI-P---INVNELKVDLMSISGHKIYGPKG--IGALYVRRKPRVRLEALIHGGGHERG  236 (402)
T ss_pred             HHHHHHHHcCCEEEEEcchhcCCc-c---cCccccCCCEEEEehhhhcCCCc--eEEEEEccCCCCCCCceecCCCccCC
Confidence            99999987 999999999974321 1   11223345588888999777446  88888876543322211         


Q ss_pred             cCCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC---Cc-eEEEEEeCCCCCHHHHHHHH
Q 014594          309 KQPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPS---YS-NFILCEVTSGMDAKKLKDDL  382 (422)
Q Consensus       309 ~~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~-~f~~~~~~~~~~~~~~~~~L  382 (422)
                      ...++.+.....++.++|+. .++.+ ..+++++.++++.+.|++++.+.+...   .. ..+.+.++ +.+.+++...|
T Consensus       237 ~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~-~~~~~~~~~~l  315 (402)
T TIGR02006       237 MRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFN-YVEGESLIMAL  315 (402)
T ss_pred             ccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEe-CcCHHHHHHhc
Confidence            11245565555555555543 13455 778899999999999988775543211   11 11123443 34566666555


Q ss_pred             HhCCcEEEeCCCC-------------------CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          383 AKMGVMIRHYNNK-------------------ELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       383 ~~~gI~v~~~~~~-------------------~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                        ++|.++.|...                   ...+++|+|++   +.+|+|++.++|+.
T Consensus       316 --~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~  373 (402)
T TIGR02006       316 --KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKS  373 (402)
T ss_pred             --CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence              58887755431                   01479999986   45677777777764

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.94  E-value=1.9e-24  Score=209.61  Aligned_cols=296  Identities=16%  Similarity=0.141  Sum_probs=210.6

Q ss_pred             CCHHHHHHHhcCCCCCCCCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC---------------E
Q 014594          109 PPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD---------------K  172 (422)
Q Consensus       109 ~~~~v~~al~~~~~~~~y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd---------------~  172 (422)
                      +++++.+++.+... ..++.. -..++++.+++++|.  +++++++|+++++.+++.+++++||               +
T Consensus        25 ~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~a~~~g~--~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~e  101 (363)
T TIGR01437        25 VSDEVADAQKRGAQ-NYFEIKELVNKTGEYIANLLGV--EDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNE  101 (363)
T ss_pred             CCHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHhhCC--CeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccce
Confidence            67999999987422 112222 356788888899986  4799999999999999999999998               9


Q ss_pred             EEEcCCCchhH----HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEE-EeCCCCccCcCCCHHHHHHHHcC-
Q 014594          173 IVDCPPTFTMY----EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF-LTSPNNPDGSIINDEDLLKILEM-  246 (422)
Q Consensus       173 Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~-l~~p~NPtG~~~~~e~l~~i~~~-  246 (422)
                      |+++.|.|..|    .......|++++.++.  ++.+|+++++++++ +++++++ +++|+||+|.+.+.+++.++|+. 
T Consensus       102 Vi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~--~~~~d~~~le~ai~-~~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~  178 (363)
T TIGR01437       102 VVLPKGHNVDYGAPVETMVRLGGGKVVEAGY--ANECSAEQLEAAIT-EKTAAILYIKSHHCVQKSMLSVEDAAQVAQEH  178 (363)
T ss_pred             EEEECccchhcCCchHHHHHhcCCeEEEEcC--CCCCCHHHHHHhcC-hhceEEEEEecCCCCcCCcCCHHHHHHHHHHc
Confidence            99999877655    4566778999999985  35799999999997 7889766 56889999999999999999997 


Q ss_pred             CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC-------CCCcHHHH
Q 014594          247 PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-------YNVSVAAE  319 (422)
Q Consensus       247 ~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~-------~~~~~~~~  319 (422)
                      |+++|+|++|..   ...   .....+.++++.|++|.+  .|++.|++++++++++.+......       +..+..++
T Consensus       179 gi~vivD~a~~~---~~~---~~~~~g~D~~~~S~~K~l--~gp~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl  250 (363)
T TIGR01437       179 NLPLIVDAAAEE---DLQ---KYYRLGADLVIYSGAKAI--EGPTSGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGL  250 (363)
T ss_pred             CCeEEEECCCCC---chH---HHHHcCCCEEEEeCCccc--CCCceEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHH
Confidence            999999999972   111   111223458889999965  678899999998888876433221       12223344


Q ss_pred             HHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCccc---CCCce-----EEEEEeC-CCCCHHHHHHHHHhCC--cE
Q 014594          320 VAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPY---PSYSN-----FILCEVT-SGMDAKKLKDDLAKMG--VM  388 (422)
Q Consensus       320 ~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---p~~~~-----f~~~~~~-~~~~~~~~~~~L~~~g--I~  388 (422)
                      .++...+.+.. .+..+.+.++++.+.+.|++++++.+.   +..+.     -+.++.. .+.+..++.+.|.++|  |.
T Consensus       251 ~aAl~~~~~~~-~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~  329 (363)
T TIGR01437       251 TAALEQYLSTG-KESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESELGMTAADVVQALRQGEPAIY  329 (363)
T ss_pred             HHHHHHHHccC-cccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEE
Confidence            44444443211 123334445677899999998766543   11111     1223321 2678999999998777  66


Q ss_pred             EEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhhh
Q 014594          389 IRHYNNKELKGYVRVSVG--KPEHTDALMECLMHL  421 (422)
Q Consensus       389 v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~l  421 (422)
                      +++.  +...+.+|+++.  +++|.+.+.++|+++
T Consensus       330 ~r~~--~~~~~~~~l~~~~~~~~e~~~~~~~l~~~  362 (363)
T TIGR01437       330 TRGY--KANEGIIEIDPRSVTGGQLDIIVERIREI  362 (363)
T ss_pred             Eeee--eecCCeEEEEeecCCHHHHHHHHHHHHHh
Confidence            6653  344678888865  467788888888765

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.94  E-value=8e-25  Score=214.04  Aligned_cols=276  Identities=16%  Similarity=0.159  Sum_probs=199.8

Q ss_pred             CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecC
Q 014594          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPR  199 (422)
Q Consensus       124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~  199 (422)
                      .+|+++...+|++.+++++|.+ + .+++++++.++..++.+++++||+|+++.|.|......    ....|+++..++.
T Consensus        56 ~r~~~pt~~~Le~~lA~l~G~~-~-al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~  133 (386)
T PRK06767         56 SRLGNPTVKLFEERMAVLEGGE-E-ALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDM  133 (386)
T ss_pred             cCCCCcchHHHHHHHHHHhCCC-c-EEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC
Confidence            4578888899999999999953 4 45455556799999988999999999999988754333    3335666655542


Q ss_pred             CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (422)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~  278 (422)
                           .|+++++++++ +++++|++++|+||||.+.+.+++.++++. |+++|+|++|........ .    ..+..+++
T Consensus       134 -----~d~~~l~~~i~-~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~p-l----~~g~Div~  202 (386)
T PRK06767        134 -----ETEADIENKIR-PNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRP-L----ELGCDAVV  202 (386)
T ss_pred             -----CCHHHHHHhhC-cCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCCc-h----hcCCcEEE
Confidence                 47899999997 689999999999999999999999999987 999999999974332211 1    22345888


Q ss_pred             ccChhhhccccccc-eeeecCHHHHHHHHHh-cCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594          279 RTFSKRAGLAGLRV-GYGAFPLSIIEYLWRA-KQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP  353 (422)
Q Consensus       279 ~S~SK~~~~~G~r~-G~i~~~~~~~~~l~~~-~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~  353 (422)
                      .|+||.++.+|.|+ ||++++++.++++.+. ...  ..++++.+.++...|+   .+. +.++.+++.+++.+.|++++
T Consensus       203 ~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~---tl~~r~~~~~~~a~~la~~L~~~p  279 (386)
T PRK06767        203 HSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRGLK---TLAVRMDRHCDNAEKIVSFLKNHD  279 (386)
T ss_pred             ecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC---cHHHHHHHHHHHHHHHHHHHHcCC
Confidence            99999998888885 8999999888775432 221  2346665555444443   334 77788999999999999987


Q ss_pred             CCc-c-cC----------CCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCC------C-----------------CC
Q 014594          354 FLN-P-YP----------SYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNN------K-----------------EL  397 (422)
Q Consensus       354 ~~~-~-~p----------~~~~f~~~~~~~~-~~~~~~~~~L~~~gI~v~~~~~------~-----------------~~  397 (422)
                      .+. + +|          ..+..+.+++.++ .+..+|.+.|...++.+.-|+.      +                 -.
T Consensus       280 ~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~  359 (386)
T PRK06767        280 AVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIY  359 (386)
T ss_pred             CccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCC
Confidence            665 2 33          2355677888532 3567888888777777764432      0                 01


Q ss_pred             CCeEEEEecChhhHHHHHH
Q 014594          398 KGYVRVSVGKPEHTDALME  416 (422)
Q Consensus       398 ~~~iRis~~~~~~~~~l~~  416 (422)
                      ++.||||++-+. .|+|.+
T Consensus       360 ~~l~R~svGlE~-~~dl~~  377 (386)
T PRK06767        360 DNLIRLSVGLES-WEDIVS  377 (386)
T ss_pred             CCeEEEEeccCC-HHHHHH
Confidence            468999999754 344433

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=99.94  E-value=1.2e-24  Score=211.32  Aligned_cols=229  Identities=17%  Similarity=0.185  Sum_probs=177.3

Q ss_pred             CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecC
Q 014594          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR  199 (422)
Q Consensus       124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~  199 (422)
                      .+|+++...+|+++++++.|.+.  .++++|+++++..++. ++++||+|+++.|.|+.    +...++..|++++.++.
T Consensus        47 ~r~~~pt~~~le~~la~l~g~~~--~~~~~sG~~ai~~~~~-ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~  123 (366)
T PRK08247         47 SRTGNPTRGVLEQAIADLEGGDQ--GFACSSGMAAIQLVMS-LFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNT  123 (366)
T ss_pred             cCCCCchHHHHHHHHHHHhCCCc--EEEEcCHHHHHHHHHH-HhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECC
Confidence            56788889999999999999754  4777888899998764 78999999999999974    34445568999999874


Q ss_pred             CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (422)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~  278 (422)
                           .|++.++++++ +++++|++++|+||+|...+.+++.++++. |+++|+|++|....... ..    ..+.++++
T Consensus       124 -----~d~~~l~~~i~-~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~-p~----~~g~di~i  192 (366)
T PRK08247        124 -----ASLKAIEQAIT-PNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQR-PL----EEGADIVI  192 (366)
T ss_pred             -----CCHHHHHHhcc-cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC-ch----hcCCcEEE
Confidence                 48999999997 689999999999999999999999999987 99999999995322111 11    23567999


Q ss_pred             ccChhhhcc-ccccceeeecC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594          279 RTFSKRAGL-AGLRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP  353 (422)
Q Consensus       279 ~S~SK~~~~-~G~r~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~  353 (422)
                      .|+||.++. ++++.|+++++ +++.+.+...+..  ..++++.+..+...|+   .+. +.++.+++++.+.+.|++++
T Consensus       193 ~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~---tl~~r~~~~~~~a~~l~~~L~~~p  269 (366)
T PRK08247        193 HSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMK---TLALRMRQHEENAKAIAAFLNEQP  269 (366)
T ss_pred             eecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccC---cHHHHHHHHHHHHHHHHHHHHhCC
Confidence            999998863 34689999986 6777777655433  4567777777777664   334 66677999999999999987


Q ss_pred             CCcc--cCC-CceEEEEEeC
Q 014594          354 FLNP--YPS-YSNFILCEVT  370 (422)
Q Consensus       354 ~~~~--~p~-~~~f~~~~~~  370 (422)
                      .+..  +|. +++|.| ++.
T Consensus       270 ~v~~v~~P~~gg~~sf-~~~  288 (366)
T PRK08247        270 GVTDVLYPGRGGMLSF-RLQ  288 (366)
T ss_pred             CeeEEecCCcCcEEEE-EEC
Confidence            6542  563 455544 774

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=99.94  E-value=3.2e-24  Score=209.08  Aligned_cols=216  Identities=17%  Similarity=0.178  Sum_probs=173.6

Q ss_pred             CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh-HHHHH---HHcCCEEEEecC
Q 014594          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-YEFDA---AVNGAAVVKVPR  199 (422)
Q Consensus       124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~-~~~~~---~~~g~~~~~v~~  199 (422)
                      .+||++....|+++++++.|.  +++++++|+++++..++.+++++||+|+++.|+|+. +....   ...|.++..++ 
T Consensus        47 ~R~~~pt~~~L~~~lA~l~g~--~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd-  123 (386)
T PRK08045         47 SRRGNPTRDVVQRALAELEGG--AGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD-  123 (386)
T ss_pred             eCCCCccHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC-
Confidence            567899899999999999994  479999999999999999999999999999999985 43222   22445666654 


Q ss_pred             CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (422)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~  278 (422)
                          ..|++.++++++ +++|+|++++|+||||.+++.+++.++++. |+++|+|++|...... ...    ..+..+++
T Consensus       124 ----~~d~e~l~~~l~-~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~-~pl----~~gaDivv  193 (386)
T PRK08045        124 ----QGDEQALRAALA-EKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQ-NPL----ALGADLVL  193 (386)
T ss_pred             ----CCCHHHHHHhcc-cCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC-Cch----hhCCCEEE
Confidence                368999999997 689999999999999999999999999987 9999999999865432 122    12234899


Q ss_pred             ccChhhhc-cccccceeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594          279 RTFSKRAG-LAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP  353 (422)
Q Consensus       279 ~S~SK~~~-~~G~r~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~  353 (422)
                      .|++|.++ .++.+.|++++ ++++++.+......  ..++++.+..+...|+.   +. +.++..+++..+.+.|++.+
T Consensus       194 ~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t---l~~R~~~~~~na~~la~~L~~~p  270 (386)
T PRK08045        194 HSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT---LVPRMELAQRNAQAIVKYLQTQP  270 (386)
T ss_pred             eecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc---HHHHHHHHHHHHHHHHHHHHcCC
Confidence            99999875 45577899877 57788877655443  45788888888888864   66 88899999999999999876


Q ss_pred             CC
Q 014594          354 FL  355 (422)
Q Consensus       354 ~~  355 (422)
                      .+
T Consensus       271 ~v  272 (386)
T PRK08045        271 LV  272 (386)
T ss_pred             CE
Confidence            54

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=99.94  E-value=3.4e-24  Score=209.56  Aligned_cols=319  Identities=16%  Similarity=0.162  Sum_probs=222.7

Q ss_pred             CCCCCeEEcCCC--CCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCC-CEEEeCCHHHHHHHHHHHhc
Q 014594           92 RKPEDIVKIDAN--ENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVL  167 (422)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~-~i~~~~G~~~al~~~~~~l~  167 (422)
                      .+++.++|+.++  ...++..|++.+++.+ +.....++.....++++++++.+...++ .+++++++++++..+++...
T Consensus        26 ~dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar  105 (375)
T PRK04260         26 TDGKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIWHSPNLYLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIAR  105 (375)
T ss_pred             CCCCEEEECCCCcccccCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHH
Confidence            456778999876  3456778999998876 3322334444456788889987643444 46899999999998888542


Q ss_pred             --CCCCEEEEcCCCchhHHH-HHHHcCCEEEE------ec-CCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC-
Q 014594          168 --DPGDKIVDCPPTFTMYEF-DAAVNGAAVVK------VP-RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN-  236 (422)
Q Consensus       168 --~~gd~Vl~~~p~y~~~~~-~~~~~g~~~~~------v~-~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~-  236 (422)
                        ..+++|++....|+.... .....|.+...      ++ .......|++.+++.+. +++.+|++++++|++|...+ 
T Consensus       106 ~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~-~~~a~vi~e~v~~~~G~~~~~  184 (375)
T PRK04260        106 KATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVN-KNTAAVMLELVQGESGVLPAD  184 (375)
T ss_pred             HhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcC-CCeEEEEECCeECCCCCcCCC
Confidence              345789998888875332 22222221110      00 00001248999999886 67889999999999999876 


Q ss_pred             ---HHHHHHHHcC-CCeEEEccCCccccCCCchhh--hhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh--
Q 014594          237 ---DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA--  308 (422)
Q Consensus       237 ---~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~--  308 (422)
                         .+++.++++. |+++|+||+|.+|...+....  .....++   +.||||.++ +|+|+||+++++++.+.+...  
T Consensus       185 ~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pd---i~t~sK~l~-~G~~ig~~~~~~~~~~~~~~~~~  260 (375)
T PRK04260        185 KDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPD---IFTLAKGLA-NGVPVGAMLAKSSLGGAFGYGSH  260 (375)
T ss_pred             HHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCC---EEEeccccc-CCcceEEEEEcHHHHhhcCCCCC
Confidence               4777777776 999999999988764433222  2222233   338999998 899999999999998877542  


Q ss_pred             cCCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHh
Q 014594          309 KQPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK  384 (422)
Q Consensus       309 ~~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~  384 (422)
                      ...++.+++.+.++.++|+.   +++.+ .++..+..++.+.+.+.+.+.+...+..|+++|++++  .+..++.+.|.+
T Consensus       261 ~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~l~~  338 (375)
T PRK04260        261 GSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVRGLGYMIGIETT--ADLSQLVEAARD  338 (375)
T ss_pred             CCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEeccceEEEEEec--CcHHHHHHHHHh
Confidence            23467789999999999854   35555 6677777777787777776544444568999999984  467889999999


Q ss_pred             CCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          385 MGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       385 ~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +||.+.+..    .+.+|+++....+.+++.++++++
T Consensus       339 ~Gi~v~~~~----~~~lR~~~~~~~t~~~i~~~l~~l  371 (375)
T PRK04260        339 KGLIVLTAG----TNVIRLLPPLTLTKEEIEQGIAIL  371 (375)
T ss_pred             CCCEEecCC----CCEEEEcCCCccCHHHHHHHHHHH
Confidence            999998753    478999985333345566666554

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=99.94  E-value=1.3e-24  Score=210.21  Aligned_cols=278  Identities=17%  Similarity=0.100  Sum_probs=203.9

Q ss_pred             CCC-CcchHHHHHHHH----HHcCCC--CCCEEEeCCHHHHHHHHHHHhcC------------CC--CEEEEcCCCchhH
Q 014594          125 IYP-DPESRRLRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLD------------PG--DKIVDCPPTFTMY  183 (422)
Q Consensus       125 ~y~-~~~~~~lr~~la----~~~~~~--~~~i~~~~G~~~al~~~~~~l~~------------~g--d~Vl~~~p~y~~~  183 (422)
                      .|+ .++..+++++++    +++|.+  ++++++|+|+++++..++.+++.            ++  +.|+++.++|..+
T Consensus        29 ~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~  108 (345)
T cd06450          29 TWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSV  108 (345)
T ss_pred             ccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHH
Confidence            363 345666666655    455874  45899999999999999987742            23  4788899999998


Q ss_pred             HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCc
Q 014594          184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT  257 (422)
Q Consensus       184 ~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~  257 (422)
                      ...++..|++++.++.++++.+|++++++.+.+.     +++++++++|+||||.+.+.+++.++++. |+++++|++|.
T Consensus       109 ~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~  188 (345)
T cd06450         109 EKAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYG  188 (345)
T ss_pred             HHHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhh
Confidence            8888888999999997766789999999999731     68889999999999999999999999987 99999999998


Q ss_pred             cccCCCchhhh-hhc-CCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccCChHHHHH
Q 014594          258 EFSGLESRMEW-VKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEVK  335 (422)
Q Consensus       258 ~~~~~~~~~~~-~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~~~  335 (422)
                      .+......... ... .+.+.+..|++|.++ ++.++|+++.+                 .+.+.++...+....+.+++
T Consensus       189 ~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~~-----------------~~~~~~~l~~l~~~g~~~~~  250 (345)
T cd06450         189 GFLLPFPEPRHLDFGIERVDSISVDPHKYGL-VPLGCSAVLVR-----------------ALKLWATLRRFGRDGYGEHI  250 (345)
T ss_pred             HHHhhChhhHHHhcCccccCEEEEchhHhhC-CCcchHHHHHH-----------------HHHHHHHHHHHhHHHHHHHH
Confidence            76532111110 111 123456779999554 66789988766                 44555566666554444488


Q ss_pred             HHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC----CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---
Q 014594          336 EALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS----GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---  407 (422)
Q Consensus       336 ~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~----~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~---  407 (422)
                      ++..+.++++.+.|++++.+.+ .+..++++.+.+++    +.+..++.+.|.++|+.+.++.....++++|++++.   
T Consensus       251 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~  330 (345)
T cd06450         251 DRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLT  330 (345)
T ss_pred             HHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCC
Confidence            8888999999999999875553 34567788888764    246678999999887666554333356799999864   


Q ss_pred             -hhhHHHHHHHHhh
Q 014594          408 -PEHTDALMECLMH  420 (422)
Q Consensus       408 -~~~~~~l~~al~~  420 (422)
                       .++++++.++|++
T Consensus       331 t~~di~~l~~~l~~  344 (345)
T cd06450         331 TRDDADALLEDIER  344 (345)
T ss_pred             CHHHHHHHHHHHHh
Confidence             3556666666654

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=99.93  E-value=1.1e-23  Score=201.32  Aligned_cols=317  Identities=21%  Similarity=0.202  Sum_probs=240.7

Q ss_pred             CCCeEEcCCCC-CCCCCCHHHHHHHhc-C-CCC-----CC--CCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           94 PEDIVKIDANE-NPYGPPPEVREALGQ-L-KFP-----YI--YPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        94 ~~~~i~l~~~~-~~~~~~~~v~~al~~-~-~~~-----~~--y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      +.++++|.+|+ -.+..+|+++++..+ + .++     .+  +++. -..+|++.||+|+|. ++.+++++|-. ++..+
T Consensus        38 ~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~-e~al~f~SGy~-AN~~~  115 (388)
T COG0156          38 GRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGA-EAALLFSSGFV-ANLGL  115 (388)
T ss_pred             CceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-CcEEEEcccch-hHHHH
Confidence            46789998875 345677888777655 2 111     11  2222 367899999999995 35666666666 55566


Q ss_pred             HHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCCH
Q 014594          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIIND  237 (422)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~  237 (422)
                      +.++++++|.|+...-.|......++..+++++.++     +.|++.||+.+++.     +.++|++.......|.+.|+
T Consensus       116 i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~-----HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL  190 (388)
T COG0156         116 LSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFK-----HNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPL  190 (388)
T ss_pred             HHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEec-----CCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCH
Confidence            677999999999999999999999999999999987     46889999999642     25677777999999999999


Q ss_pred             HHHHHHHcC-CCeEEEccCCccccCCCc---hhhhhh--cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC
Q 014594          238 EDLLKILEM-PILVVLDEAYTEFSGLES---RMEWVK--KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (422)
Q Consensus       238 e~l~~i~~~-~~~li~Deay~~~~~~~~---~~~~~~--~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~  311 (422)
                      ++|.+|++. +.++++||+|+-...++.   ......  ..+.+|+++||||++|..|   ||+.++..+++.+.....+
T Consensus       191 ~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g~~~~~d~L~~~ar~  267 (388)
T COG0156         191 PELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAGSAALIDYLRNRARP  267 (388)
T ss_pred             HHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeCcHHHHHHHHHhCCc
Confidence            999999998 999999999997665432   222222  2455899999999999888   9999999999999988776


Q ss_pred             C----CCcHHHHHHHHHHccCChH-HHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCC
Q 014594          312 Y----NVSVAAEVAACAALQNPIY-LEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMG  386 (422)
Q Consensus       312 ~----~~~~~~~~aa~~~L~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~g  386 (422)
                      |    ++++...+++.++|+.-.. .+.+++++++..++.+.++..++ ...+..+..+.+.+.+...+.++.+.|+++|
T Consensus       268 ~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~~~-~~~~s~s~I~pv~~gd~~~a~~~s~~l~~~G  346 (388)
T COG0156         268 FIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKALGL-VLLPSESPIIPVILGDEERALEASRALLEEG  346 (388)
T ss_pred             eeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC-ccCCCCCCeeeeEeCCHHHHHHHHHHHHHCC
Confidence            3    4567777777777765332 23888888888888877776664 3357788888888865455778888999889


Q ss_pred             cEEEeCCC---CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          387 VMIRHYNN---KELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       387 I~v~~~~~---~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      |.+.+...   +.+...+|++++   +.++++.+.+++..+
T Consensus       347 i~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~  387 (388)
T COG0156         347 IYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV  387 (388)
T ss_pred             eeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence            99987766   455679999987   456667777776653

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=99.93  E-value=6.5e-24  Score=207.87  Aligned_cols=319  Identities=15%  Similarity=0.145  Sum_probs=209.8

Q ss_pred             CCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCC--CCCCEEEeCCHHHHHHHHHHH
Q 014594           92 RKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGL--ESDHILVGCGADELIDLIMRC  165 (422)
Q Consensus        92 ~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~--~~~~i~~~~G~~~al~~~~~~  165 (422)
                      .+++.++|+.+|..  .+ ..+|++.+++.+ +......+.....++++++++++.-  ..+.++++++++++++.+++.
T Consensus        26 ~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~~~  105 (377)
T PRK02936         26 NNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSNLFTNSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKL  105 (377)
T ss_pred             CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHHHH
Confidence            45778999988862  22 367888888876 3221112222335666666666642  135899999999999999995


Q ss_pred             h-cCCC-CEEEEcCCCchhHHHHHH-HcCCEEE---EecCCCC----CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594          166 V-LDPG-DKIVDCPPTFTMYEFDAA-VNGAAVV---KVPRKSD----FSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (422)
Q Consensus       166 l-~~~g-d~Vl~~~p~y~~~~~~~~-~~g~~~~---~v~~~~~----~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (422)
                      . ..+| ++|+..++.|+....... ..+....   ..+...+    ...|++.+++.+. +++++|+++.+++++|...
T Consensus       106 a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~ii~e~i~~~~G~~~  184 (377)
T PRK02936        106 ARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMN-EEVAAVMLEVVQGEGGVIP  184 (377)
T ss_pred             HHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhcc-CCeEEEEEecccCCCCCcc
Confidence            3 2244 679999998874432222 2222111   0111011    0127899999986 6799999999999998874


Q ss_pred             -CHHHHHH---HHcC-CCeEEEccCCccccCCCchhh--hhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh
Q 014594          236 -NDEDLLK---ILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA  308 (422)
Q Consensus       236 -~~e~l~~---i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~  308 (422)
                       +.+.+.+   +|+. |+++|+||+|.+|...+....  .....++   +.+|||.++ +|+|+||+++++++.+.+...
T Consensus       185 ~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~d---i~t~sK~l~-~G~~ig~v~~~~~~~~~~~~~  260 (377)
T PRK02936        185 ADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPD---IVTVAKGLG-NGIPVGAMIGKKELGTAFGPG  260 (377)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCc---EEEEccccc-CCCccEEEEEcHHHHhhccCC
Confidence             5455544   5554 999999999998765443221  1221222   236899999 899999999999998887543


Q ss_pred             cC--CCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCcccCCCceEEEEEeCCCCCHHHHHHHH
Q 014594          309 KQ--PYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPYPSYSNFILCEVTSGMDAKKLKDDL  382 (422)
Q Consensus       309 ~~--~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L  382 (422)
                      ..  .++.+++.+.++.++|+.....+..++++++.+++++.|++    ++.+......|.++|+++++  +...+.+.|
T Consensus       261 ~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~--~~~~~~~~l  338 (377)
T PRK02936        261 SHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTE--EVAPVIEQL  338 (377)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEecc--hHHHHHHHH
Confidence            32  36789999999999986532111445566666666666654    34333234567899999964  367888888


Q ss_pred             HhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          383 AKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       383 ~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .++||.+.+..    .+++||++....+.+++.+++++|
T Consensus       339 ~~~gv~v~~~g----~~~lRi~p~~~~~~~~i~~~i~~l  373 (377)
T PRK02936        339 REEGLLVLSAG----PNVIRLLPPLVVTKEELDQAVYLL  373 (377)
T ss_pred             HHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHH
Confidence            89999998754    479999964322235566666654

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=99.93  E-value=4.2e-24  Score=208.51  Aligned_cols=279  Identities=19%  Similarity=0.198  Sum_probs=202.4

Q ss_pred             CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecC
Q 014594          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR  199 (422)
Q Consensus       124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~  199 (422)
                      .+|+++...+|++.+++++|.  +++++++++++++..++.+++++||+|+++.+.|..    +...++..|++++.++.
T Consensus        49 ~r~~~p~~~~le~~la~l~g~--~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~  126 (380)
T TIGR01325        49 SRYANPTVAAFEERIAALEGA--ERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDP  126 (380)
T ss_pred             ecCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECC
Confidence            457777789999999999986  478889999999999999999999999999988853    34456668999998875


Q ss_pred             CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (422)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~  278 (422)
                      +     |+++++++++ +++++|++++|+||+|.+.+.+++.++++. |+++|+|++|..+..... .    ..+.++++
T Consensus       127 ~-----d~~~l~~~i~-~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~p-l----~~g~Divv  195 (380)
T TIGR01325       127 T-----DLNAWEAAVK-PNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQP-L----KLGADVVV  195 (380)
T ss_pred             C-----CHHHHHHhcC-CCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCc-h----hhCCCEEE
Confidence            3     7899999886 689999999999999999999999999987 999999999986543221 1    22445888


Q ss_pred             ccChhhhccccccc-eeeecCHHHHHHHHHhcCCC--CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC
Q 014594          279 RTFSKRAGLAGLRV-GYGAFPLSIIEYLWRAKQPY--NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF  354 (422)
Q Consensus       279 ~S~SK~~~~~G~r~-G~i~~~~~~~~~l~~~~~~~--~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~  354 (422)
                      .|++|.++.+|.++ |++++++++++.+......+  .+++...   ..++..-+.+. +.++..++++.+.+.|++++.
T Consensus       196 ~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p~~a---~~~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~  272 (380)
T TIGR01325       196 YSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSPFNA---WVLLKGLETLSLRMQKQFDSALAIAEWLQAQPQ  272 (380)
T ss_pred             eeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCHHHH---HHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            89999998778775 78888999888877654433  3344443   33444445566 778888999999999998764


Q ss_pred             Cc--ccC----------------CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC----------------------
Q 014594          355 LN--PYP----------------SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN----------------------  394 (422)
Q Consensus       355 ~~--~~p----------------~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~----------------------  394 (422)
                      +.  .+|                ..|..+.+++.+.....+|.+.|.--.+.+.-|+.                      
T Consensus       273 v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~  352 (380)
T TIGR01325       273 VQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVADRAAAWKVLDAVELVSITNNLGDAKSTITHPATTTHGRMQPEERAA  352 (380)
T ss_pred             ccEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcCCcceEcccCCCCCeeeeCCCccCcccCCHHHHHh
Confidence            43  122                23456777885212234555555322222221110                      


Q ss_pred             -CCCCCeEEEEecChhhHHHHHHHHh
Q 014594          395 -KELKGYVRVSVGKPEHTDALMECLM  419 (422)
Q Consensus       395 -~~~~~~iRis~~~~~~~~~l~~al~  419 (422)
                       .-.++.||||++.++ .|+|.+-++
T Consensus       353 ~gi~~~liR~svGlE~-~~dl~~dl~  377 (380)
T TIGR01325       353 AGIGDGLVRLSVGLED-VDDLIADLK  377 (380)
T ss_pred             cCCCCCeEEEEeccCC-HHHHHHHHH
Confidence             011468999999865 466665554

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=99.93  E-value=2.2e-24  Score=211.33  Aligned_cols=270  Identities=18%  Similarity=0.194  Sum_probs=189.9

Q ss_pred             eEEcCCCCCCCCCCHHHHHHHhcC--CC-CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEE
Q 014594           97 IVKIDANENPYGPPPEVREALGQL--KF-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI  173 (422)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~--~~-~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~V  173 (422)
                      .|.+++... ++.+.++.+.....  .+ ..+|+++...+|++++++++|.+..  +++++++.++..++.+++++||+|
T Consensus        31 pi~~~~~~~-~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~l~G~~~~--~~~~sG~~Ai~~~l~~~l~~Gd~V  107 (398)
T PRK07504         31 ALFLTQGFV-YDTAEAAEARFKGEDPGFIYSRYSNPTVDMFEKRMCALEGAEDA--RATASGMAAVTAAILCQVKAGDHV  107 (398)
T ss_pred             CeECCCCcc-CCCHHHHHHHhccCcCCceeecCCCchHHHHHHHHHHHhCCCee--eEecCHHHHHHHHHHHHhCCCCEE
Confidence            366766542 23334443333211  11 1457888889999999999997643  446677888888888889999999


Q ss_pred             EEcCCCchhHHHH----HHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CC
Q 014594          174 VDCPPTFTMYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PI  248 (422)
Q Consensus       174 l~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~  248 (422)
                      +++.|.|..+...    +...|++++.++     ..|+++++++++ +++|+|++++|+||||.+++.+++.++++. |+
T Consensus       108 l~~~~~y~~~~~~~~~~~~~~G~~v~~vd-----~~d~e~l~~ai~-~~tklV~lesp~NptG~v~dl~~I~~la~~~gi  181 (398)
T PRK07504        108 VAARALFGSCRYVVETLLPRYGIESTLVD-----GLDLDNWEKAVR-PNTKVFFLESPTNPTLEVIDIAAVAKIANQAGA  181 (398)
T ss_pred             EEcCCchhHHHHHHHHHHhhcCeEEEEEC-----CCCHHHHHHhcC-cCceEEEEECCCCCCcEecCHHHHHHHHHHcCC
Confidence            9999999865433    345799988885     478999999997 789999999999999999999999999987 99


Q ss_pred             eEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccce-eeecCHHHHHH-HHHhcC--CCCCcHHHHHHHHH
Q 014594          249 LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEY-LWRAKQ--PYNVSVAAEVAACA  324 (422)
Q Consensus       249 ~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G-~i~~~~~~~~~-l~~~~~--~~~~~~~~~~aa~~  324 (422)
                      ++|+|++|..+... ...    ..+.++++.|+||.++.+|+++| +++++++.+.+ +.....  ...++++.+..+..
T Consensus       182 ~lvvD~a~a~~~~~-~~~----~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~  256 (398)
T PRK07504        182 KLVVDNVFATPLFQ-KPL----ELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTLLK  256 (398)
T ss_pred             EEEEECCccccccC-Cch----hhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHh
Confidence            99999999865432 111    22456899999999988999985 66677776643 332222  23456665555555


Q ss_pred             HccCChHHH-HHHHHHHHHHHHHHHHccCCCCc--ccC----------------CCceEEEEEeCCC-CCHHHHHHHHH
Q 014594          325 ALQNPIYLE-VKEALIKERERLFKLLKDVPFLN--PYP----------------SYSNFILCEVTSG-MDAKKLKDDLA  383 (422)
Q Consensus       325 ~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~--~~p----------------~~~~f~~~~~~~~-~~~~~~~~~L~  383 (422)
                      .|+   .+. +.++..++...+.+.|++++.+.  .+|                ..|..+.+++.++ .....|.+.|.
T Consensus       257 ~L~---tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~~~~~l~  332 (398)
T PRK07504        257 GLE---TLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFRFLNALK  332 (398)
T ss_pred             ccc---hHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHHHHHhCC
Confidence            553   344 77777899999999999876443  122                1256777888522 22334555554

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=99.93  E-value=5.1e-24  Score=208.46  Aligned_cols=215  Identities=15%  Similarity=0.146  Sum_probs=169.6

Q ss_pred             CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHH----HHHHHcCCEEEEecCC
Q 014594          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRK  200 (422)
Q Consensus       125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~  200 (422)
                      +|+++...+|+++++++.|.  ++.++++++++++..++.+++++||+|+++.|+|....    ..+...|++++.++  
T Consensus        60 r~~~p~~~~le~~lA~l~g~--~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd--  135 (398)
T PRK08249         60 RNTNPTVQAFEEKVRILEGA--EAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCE--  135 (398)
T ss_pred             CCCChHHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcC--
Confidence            45777789999999999995  35677777789999999989999999999999998643    33456898888776  


Q ss_pred             CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (422)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~  279 (422)
                         ..|+++++++++ +++|+|++++|+||||.+++.+++.++++. |+++|+|++|..+.... ..    ..+..+++.
T Consensus       136 ---~~d~e~l~~~i~-~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~-~l----~~~~Divv~  206 (398)
T PRK08249        136 ---TGDHEQIEAEIA-KGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQN-PL----ALGADLVIH  206 (398)
T ss_pred             ---CCCHHHHHHhcC-CCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCC-ch----hhCCCEEec
Confidence               368999999997 689999999999999999999999999987 99999999998654322 11    123348889


Q ss_pred             cChhhhccccccc-eeeecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594          280 TFSKRAGLAGLRV-GYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFL  355 (422)
Q Consensus       280 S~SK~~~~~G~r~-G~i~~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~  355 (422)
                      |+||.++..|.++ |++++++++++++...+..  ..++++.+..+...|   +.+. +.++..++++.+.+.|++++.+
T Consensus       207 S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l---~tL~~R~~~~~~na~~la~~L~~~p~v  283 (398)
T PRK08249        207 SATKFLSGHADALGGVVCGSKELMEQVYHYREINGATMDPMSAYLILRGM---KTLKLRVRQQQESAMALAKYLQTHPKV  283 (398)
T ss_pred             cCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhCc---chHHHHHHHHHHHHHHHHHHHHcCCCe
Confidence            9999998667665 7788888998888765543  345666655554444   3445 6678889999999999987644

>PRK07582 cystathionine gamma-lyase; Validated

Probab=99.93  E-value=2.4e-23  Score=202.07  Aligned_cols=274  Identities=21%  Similarity=0.189  Sum_probs=195.6

Q ss_pred             CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEecC
Q 014594          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPR  199 (422)
Q Consensus       124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~  199 (422)
                      .+||++...+|+++++++.  . ++.++++++++++..++.+++++||+|+++.|+|..+...+    ...|++++.++.
T Consensus        46 ~ry~~p~~~~Le~~lA~l~--~-~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~  122 (366)
T PRK07582         46 GRASNPTWRALEAALGELE--G-AEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPT  122 (366)
T ss_pred             ECCCCccHHHHHHHHHHHc--C-CCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECC
Confidence            5689999999999999999  3 35555566678999999999999999999999998776544    347999999985


Q ss_pred             CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (422)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~  278 (422)
                      ++.+    +    .+. +++++|++++|+||||.+.+.+++.++++. |+++|+|++|...... ....    .+..+++
T Consensus       123 ~~~~----~----~~~-~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~~-~p~~----~g~Divv  188 (366)
T PRK07582        123 AGMA----E----AAL-AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLGQ-RPLE----LGADLVV  188 (366)
T ss_pred             CChH----H----Hhc-cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCcccc-Cchh----cCCcEEE
Confidence            4321    1    222 578999999999999999999999999987 9999999999642211 1111    2334888


Q ss_pred             ccChhhhc-cccccceeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594          279 RTFSKRAG-LAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP  353 (422)
Q Consensus       279 ~S~SK~~~-~~G~r~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~  353 (422)
                      .|+||.++ .+|+|+||+++ ++++++.+...+..  ..++++....+...|+.   ++ +.++..++...+.+.|++++
T Consensus       189 ~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t---l~~R~~~~~~na~~la~~L~~~p  265 (366)
T PRK07582        189 ASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLGT---LGLRFARQCANALAVAELLAGHP  265 (366)
T ss_pred             ecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhcccc---HHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999874 46799999997 57888877655443  34566776666666653   44 66788899999999999877


Q ss_pred             CCc-c-cCC----------------CceEEEEEeCCCCCHHHHHHHHHhCCcEEE---eCCC---------C---CCCCe
Q 014594          354 FLN-P-YPS----------------YSNFILCEVTSGMDAKKLKDDLAKMGVMIR---HYNN---------K---ELKGY  400 (422)
Q Consensus       354 ~~~-~-~p~----------------~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~---~~~~---------~---~~~~~  400 (422)
                      .+. + +|.                .|..+.+++.   +.++..+.+.+.++...   -|+.         .   ..++.
T Consensus       266 ~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~---~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~l  342 (366)
T PRK07582        266 AVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA---DAAAAERFVAASRLVVAATSFGGVHTSADRRARWGDAVPEGF  342 (366)
T ss_pred             CccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC---CHHHHHHHHHhCCcceecccCCCccchhhhHHHcCCCCCCCe
Confidence            553 2 221                3556778884   45666666666666553   1111         0   12468


Q ss_pred             EEEEecChh---hHHHHHHHHhh
Q 014594          401 VRVSVGKPE---HTDALMECLMH  420 (422)
Q Consensus       401 iRis~~~~~---~~~~l~~al~~  420 (422)
                      ||+|++.+.   .+++|.+||++
T Consensus       343 iR~svGlE~~~dli~dl~~al~~  365 (366)
T PRK07582        343 VRLSCGIEDTDDLVADLERALDA  365 (366)
T ss_pred             EEEEeccCCHHHHHHHHHHHHhh
Confidence            999999643   34455566554

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=99.93  E-value=2.8e-24  Score=208.55  Aligned_cols=299  Identities=17%  Similarity=0.139  Sum_probs=209.7

Q ss_pred             cCCCCCCCCCCHHHHHHHhcC-CCCCCCCC--------c---chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhc
Q 014594          100 IDANENPYGPPPEVREALGQL-KFPYIYPD--------P---ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL  167 (422)
Q Consensus       100 l~~~~~~~~~~~~v~~al~~~-~~~~~y~~--------~---~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~  167 (422)
                      |+.+... ++++.+++++.+. ......|.        .   -..++|+.+++++++++++|++++|++++++.++.++.
T Consensus         2 ld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~   80 (353)
T TIGR03235         2 LDHNATT-PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLA   80 (353)
T ss_pred             CCCCCCC-CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHH
Confidence            3343333 3568888888652 11111111        0   14589999999999998999999999999999998775


Q ss_pred             C----CC-CEEEEcCCCchhHH---HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594          168 D----PG-DKIVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (422)
Q Consensus       168 ~----~g-d~Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~  239 (422)
                      .    +| +.|++....|+.+.   ..++..|++++.++.++++.+|++++++.++ ++++++++++++||||.+.+.++
T Consensus        81 ~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~-~~~~lv~~~~~~n~tG~~~~~~~  159 (353)
T TIGR03235        81 RAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIR-PDTLLVSIMHVNNETGSIQPIRE  159 (353)
T ss_pred             HhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCC-CCCEEEEEEcccCCceeccCHHH
Confidence            3    55 77888876666443   3345579999999987778899999999997 68999999999999999999999


Q ss_pred             HHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHH--HH---------
Q 014594          240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL--WR---------  307 (422)
Q Consensus       240 l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l--~~---------  307 (422)
                      +.++++. |+++|+|+++......    ..+...+.++++.|.+|.+|.+|  +|+++++++.....  ..         
T Consensus       160 I~~l~~~~~~~~ivD~a~~~g~~~----~~~~~~~~D~~~~s~~K~~gp~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~  233 (353)
T TIGR03235       160 IAEVLEAHEAFFHVDAAQVVGKIT----VDLSADRIDLISCSGHKIYGPKG--IGALVIRKRGKPKAPLKPIMFGGGQER  233 (353)
T ss_pred             HHHHHHHcCCEEEEEchhhcCCcc----ccccccCCCEEEeehhhcCCCCc--eEEEEEccCcccccccCceeeCCCCcC
Confidence            9999987 9999999998743221    11223345578889999776555  89999887753221  10         


Q ss_pred             hcCCCCCcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCCccc-CCC---ceEEEEEeCCCCCHHHHHHH
Q 014594          308 AKQPYNVSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFLNPY-PSY---SNFILCEVTSGMDAKKLKDD  381 (422)
Q Consensus       308 ~~~~~~~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p~~---~~f~~~~~~~~~~~~~~~~~  381 (422)
                      ....++.+.....++.++++.. +..+ .+++++++++++++.|++.++ .+. +..   ...+.+.++ +.+.+++.+.
T Consensus       234 ~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~g~-~~~~~~~~~~~~i~~~~~~-~~~~~~v~~~  311 (353)
T TIGR03235       234 GLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQTLGV-KLNGDPAETIPHILNFSID-GVNSEALIVN  311 (353)
T ss_pred             ccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCe-EEeCCcccccCCEEEEEeC-CcCHHHHHHH
Confidence            0113455555555555555432 2344 788999999999999988553 332 222   234555555 6788899999


Q ss_pred             HHhCCcEEEeCCCCCC----CCeEEEEecChh
Q 014594          382 LAKMGVMIRHYNNKEL----KGYVRVSVGKPE  409 (422)
Q Consensus       382 L~~~gI~v~~~~~~~~----~~~iRis~~~~~  409 (422)
                      |.+ ||.+++|..+..    ..++|.+++..+
T Consensus       312 L~~-~i~v~~g~~~~~~~~~~~~~l~~~g~~~  342 (353)
T TIGR03235       312 LRA-DAAVSTGSACSSSKYEPSHVLQAMGLDT  342 (353)
T ss_pred             HhC-CeEEEchhhcCCCCCCCCHHHHHcCCCH
Confidence            965 899998766322    346788887654

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>PRK07505 hypothetical protein; Provisional

Probab=99.93  E-value=3.9e-23  Score=203.88  Aligned_cols=310  Identities=15%  Similarity=0.110  Sum_probs=204.1

Q ss_pred             CCCCCeEEcCCCCCC-CCCCHHHHHHHhc-CC-CC--CC------CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594           92 RKPEDIVKIDANENP-YGPPPEVREALGQ-LK-FP--YI------YPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (422)
Q Consensus        92 ~~~~~~i~l~~~~~~-~~~~~~v~~al~~-~~-~~--~~------y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~  160 (422)
                      .+++.++|+..+... +..+|++++++.+ +. ++  ..      +......+++++|+++++.  +.++++ +++++..
T Consensus        43 ~~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~~-sG~~a~~  119 (402)
T PRK07505         43 ADGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA--SVLTFT-SCSAAHL  119 (402)
T ss_pred             cCCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC--CEEEEC-ChHHHHH
Confidence            456778999765322 2568999988876 22 21  11      1122357899999999986  444454 5566777


Q ss_pred             HHHHHhc----CCCC-EEEEcCCCchhH-H--HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccC
Q 014594          161 LIMRCVL----DPGD-KIVDCPPTFTMY-E--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG  232 (422)
Q Consensus       161 ~~~~~l~----~~gd-~Vl~~~p~y~~~-~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG  232 (422)
                      .+++.+.    .+|+ .|++....|+.. .  ......+.+++.+|.     .|++.+++.++ .+++++++++|+||||
T Consensus       120 ~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-----~d~~~l~~~~~-~~~~~~vl~~p~~~~G  193 (402)
T PRK07505        120 GILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-----NDLDALEDICK-TNKTVAYVADGVYSMG  193 (402)
T ss_pred             HHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-----CCHHHHHHHHh-cCCCEEEEEecccccC
Confidence            7766432    2232 366666666432 1  111224567777763     48999999886 5678999999999999


Q ss_pred             cCCCHHHHHHHHcC-CCeEEEccCCccccC--CCc--hhhhhh--cCCcEEEEccChhhhccccccceeeec-CHHHHHH
Q 014594          233 SIINDEDLLKILEM-PILVVLDEAYTEFSG--LES--RMEWVK--KHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEY  304 (422)
Q Consensus       233 ~~~~~e~l~~i~~~-~~~li~Deay~~~~~--~~~--~~~~~~--~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~~~  304 (422)
                      .+++.+++.+|++. ++++|+||+|....+  .+.  ......  .++++++++|+||.++.+|   ||+++ ++++++.
T Consensus       194 ~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~  270 (402)
T PRK07505        194 GIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GVIMLGDAEQIEL  270 (402)
T ss_pred             CcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eEEEeCCHHHHHH
Confidence            99999999999987 999999999864322  111  122233  3577899999999998776   88764 7888888


Q ss_pred             HHHhcCCC----CCcHHHHHHHHHHcc--CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceE---EEEEeCCCCC
Q 014594          305 LWRAKQPY----NVSVAAEVAACAALQ--NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNF---ILCEVTSGMD  374 (422)
Q Consensus       305 l~~~~~~~----~~~~~~~~aa~~~L~--~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f---~~~~~~~~~~  374 (422)
                      +.....++    ++++++..++.++++  ..+++. ..++++++.+.+.+.+..       +..+++   .++.++...+
T Consensus       271 ~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~-------~~~g~~~~i~~~~~~~~~~  343 (402)
T PRK07505        271 ILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPT-------EQSGSFLPIRLIYIGDEDT  343 (402)
T ss_pred             HHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHh-------cCCCCCCCEEEEEeCCHHH
Confidence            87766654    355677777777775  334443 555555555444333211       112333   2334332224


Q ss_pred             HHHHHHHHHhCCcEEEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          375 AKKLKDDLAKMGVMIRHYNNKE---LKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       375 ~~~~~~~L~~~gI~v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      +.++.+.|.++||.++++..+.   ..+++||+++   +.++++++.++|+.
T Consensus       344 ~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~  395 (402)
T PRK07505        344 AIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKE  395 (402)
T ss_pred             HHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHH
Confidence            6789999999999999874432   2369999998   67777777777764

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=99.93  E-value=8.7e-24  Score=208.52  Aligned_cols=313  Identities=16%  Similarity=0.195  Sum_probs=213.0

Q ss_pred             CCCCCeEEcCCC--CCCC-CCCHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           92 RKPEDIVKIDAN--ENPY-GPPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        92 ~~~~~~i~l~~~--~~~~-~~~~~v~~al~~-~~~~----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      .+++.++|+..|  ...+ ..+|++.+++.+ +...    ..+..+...++.+.|++..+  .+.+++++++++|++.++
T Consensus        37 ~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~sGseA~e~a~  114 (403)
T PRK05093         37 QQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDATF--AERVFFANSGAEANEAAF  114 (403)
T ss_pred             CCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhCC--CCEEEEeCchHHHHHHHH
Confidence            457789999776  2223 367888888776 2211    11222335678888888775  369999999999999999


Q ss_pred             HHhc--------CCCCEEEEcCCCchhHHHHH-HHcC------------CEEEEecCCCCCCCCHHHHHHHhhcCCCeEE
Q 014594          164 RCVL--------DPGDKIVDCPPTFTMYEFDA-AVNG------------AAVVKVPRKSDFSLNVELIADAVEREKPKCI  222 (422)
Q Consensus       164 ~~l~--------~~gd~Vl~~~p~y~~~~~~~-~~~g------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i  222 (422)
                      +...        ...++|+..+..|++....+ ...|            ..++.++     .-|++.+++.+. +++++|
T Consensus       115 klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~-~~~aai  188 (403)
T PRK05093        115 KLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVP-----FNDLAAVKAVID-DHTCAV  188 (403)
T ss_pred             HHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeC-----CCCHHHHHHHhc-CCeEEE
Confidence            9431        12356888888887543322 2111            1122222     127899999886 678888


Q ss_pred             EEeCCCCccCcCC--CHHHHHHH---HcC-CCeEEEccCCccccCCCchhh--hhhcCCcEEEEccChhhhcccccccee
Q 014594          223 FLTSPNNPDGSII--NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGY  294 (422)
Q Consensus       223 ~l~~p~NPtG~~~--~~e~l~~i---~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~~~G~r~G~  294 (422)
                      +++ |.||+|.++  +.+.+++|   |+. |+++|+||+|.++.+.+....  .....+.   +.||||.++ +|+|+||
T Consensus       189 iie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd---i~s~sK~l~-~G~rig~  263 (403)
T PRK05093        189 VVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPD---ILTSAKALG-GGFPIGA  263 (403)
T ss_pred             EEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCC---EEEeccccc-CCcceEE
Confidence            887 777787765  65555554   544 999999999998865443221  1111122   568999999 8999999


Q ss_pred             eecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCC----CCcccCCCceEEEEE
Q 014594          295 GAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVP----FLNPYPSYSNFILCE  368 (422)
Q Consensus       295 i~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~~~f~~~~  368 (422)
                      +++++++++.+.....  .++.+++.|.++.++|+.....+..++++++++++.+.|++++    .....+..|.++|+.
T Consensus       264 vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~  343 (403)
T PRK05093        264 MLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAE  343 (403)
T ss_pred             EEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEE
Confidence            9999999988865322  3677899999998877532111166788888999999888753    112345678999999


Q ss_pred             eCCCC--CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          369 VTSGM--DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       369 ~~~~~--~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +++..  +..++++.|.++||.+.+..    .+++||+++...+.+++.+++++|
T Consensus       344 l~~~~~~~~~~~~~~l~~~Gv~v~~~g----~~~lRl~~~~~~~~~~i~~~~~~l  394 (403)
T PRK05093        344 LKPQYKGRARDFLNAAAEEGVMVLVAG----PDVLRFAPSLVIEEADIDEGLARF  394 (403)
T ss_pred             ecCcchhHHHHHHHHHHHCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHH
Confidence            86432  56789999999999998743    479999866543346666666654

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.93  E-value=1e-23  Score=205.38  Aligned_cols=279  Identities=19%  Similarity=0.203  Sum_probs=203.4

Q ss_pred             CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEecCC
Q 014594          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRK  200 (422)
Q Consensus       125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~  200 (422)
                      +|+++...+|++++++++|.  ++.++++++++|+..++.+++++||+|+++.+.|.....    .+...|+++..++.+
T Consensus        36 r~~~p~~~~le~~la~l~g~--~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~  113 (369)
T cd00614          36 RIGNPTVDALEKKLAALEGG--EAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPD  113 (369)
T ss_pred             CCCChhHHHHHHHHHHHHCC--CCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCC
Confidence            34667789999999999985  467778888999999999999999999999999975443    345689999888742


Q ss_pred             CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (422)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~  279 (422)
                           |+++++++++ +++++|++++|+||+|.+.+.+++.++++. |+++|+|++|...... ...    ..+.++++.
T Consensus       114 -----d~~~l~~~i~-~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~-~~~----~~g~Divv~  182 (369)
T cd00614         114 -----DPEALEAAIK-PETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQ-RPL----ELGADIVVH  182 (369)
T ss_pred             -----CHHHHHHhcC-CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcC-Chh----hhCCcEEEe
Confidence                 5899999997 589999999999999999999999999987 9999999999854321 111    234568999


Q ss_pred             cChhhhcccc-ccceeeecCH-HHHHHHHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC
Q 014594          280 TFSKRAGLAG-LRVGYGAFPL-SIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF  354 (422)
Q Consensus       280 S~SK~~~~~G-~r~G~i~~~~-~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~  354 (422)
                      |+||.++.+| .+.||+++++ ++++++.....  .+.+++..+.++...|+   .+. +.++..++.+++.+.|++++.
T Consensus       183 S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~---tl~~r~~~~~~na~~la~~L~~~~~  259 (369)
T cd00614         183 SATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLK---TLPLRMERHSENALKVAEFLEKHPK  259 (369)
T ss_pred             ccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            9999987665 7899999977 88888876554  35567777666666664   344 777888999999999998874


Q ss_pred             Cc-c-cC----------------CCceEEEEEeCC-CCCHHHHHHHHHhCCcEEEeCCC---------------C-----
Q 014594          355 LN-P-YP----------------SYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRHYNN---------------K-----  395 (422)
Q Consensus       355 ~~-~-~p----------------~~~~f~~~~~~~-~~~~~~~~~~L~~~gI~v~~~~~---------------~-----  395 (422)
                      +. + +|                ..|..+.+.+.+ .....+|.+.|.--++.+.-|+.               .     
T Consensus       260 v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~  339 (369)
T cd00614         260 VERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLFSLAVSLGGVESLVEHPASMTHSQLPPEERA  339 (369)
T ss_pred             ccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcCCcceEcccCCCCceeeeCCcccccccCCHHHHH
Confidence            42 2 33                246777788852 12233444444311111111110               0     


Q ss_pred             --C-CCCeEEEEecChhhHHHHHHHHhh
Q 014594          396 --E-LKGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       396 --~-~~~~iRis~~~~~~~~~l~~al~~  420 (422)
                        + .++.+|+|++.++ .|+|.+.|++
T Consensus       340 ~~g~~~~liR~svGlE~-~~dl~~dl~~  366 (369)
T cd00614         340 AAGITPGLVRLSVGIED-VEDLIADLEQ  366 (369)
T ss_pred             hcCCCCCeEEEEeCcCC-HHHHHHHHHH
Confidence              1 1468999999864 4666665543

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.93  E-value=1e-23  Score=206.23  Aligned_cols=216  Identities=15%  Similarity=0.144  Sum_probs=168.9

Q ss_pred             CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecC
Q 014594          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR  199 (422)
Q Consensus       124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~  199 (422)
                      .+|+++...+|++++++++|.+  ..++++++++++..++.+++++||+|+++.|.|..    +...+...|+++..++.
T Consensus        54 ~r~~~p~~~~le~~lA~l~g~~--~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~  131 (391)
T TIGR01328        54 SRLGNPTVSNLEGRIAFLEGTE--AAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINM  131 (391)
T ss_pred             eCCCCchHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECC
Confidence            4568888899999999999964  46778888899999999999999999999998853    34445568999998875


Q ss_pred             CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (422)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~  278 (422)
                      +     |++.+++++. +++++|++++|+||+|.+.+.+++.++++. |+++|+|++|....... ..    ..+..+++
T Consensus       132 ~-----d~e~l~~~i~-~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~-~~----~~g~Divv  200 (391)
T TIGR01328       132 A-----IPEEVKAHIK-DNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTN-PV----ALGVDVVV  200 (391)
T ss_pred             C-----CHHHHHHhhc-cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCC-ch----hcCCCEEE
Confidence            3     7899999997 689999999999999999999999999987 99999999998543221 11    22344889


Q ss_pred             ccChhhhcccccc-ceeeecCHHHHHHHHHhcC--C--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccC
Q 014594          279 RTFSKRAGLAGLR-VGYGAFPLSIIEYLWRAKQ--P--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDV  352 (422)
Q Consensus       279 ~S~SK~~~~~G~r-~G~i~~~~~~~~~l~~~~~--~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~  352 (422)
                      .|+||.++.+|.+ .|+++++++++++++....  .  ..+++.....+...|+   .+. +.++.+++.+.+.+.|+++
T Consensus       201 ~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~---tl~~r~~~~~~na~~la~~L~~~  277 (391)
T TIGR01328       201 HSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLK---TLNIRMKRHSENAMKVAEYLKSH  277 (391)
T ss_pred             ccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcC---cHHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999988876 5788889999888875321  2  2345555554544443   234 6777888899999999887


Q ss_pred             CCC
Q 014594          353 PFL  355 (422)
Q Consensus       353 ~~~  355 (422)
                      +.+
T Consensus       278 p~v  280 (391)
T TIGR01328       278 PAV  280 (391)
T ss_pred             CCc
Confidence            644

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=99.93  E-value=1.8e-23  Score=204.54  Aligned_cols=215  Identities=19%  Similarity=0.168  Sum_probs=167.6

Q ss_pred             CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHH----HHHHHcCCEEEEecCC
Q 014594          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRK  200 (422)
Q Consensus       125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~  200 (422)
                      +|+++...++++.+++++|.  +++++++|+++|+..++.+++++||+|+++.+.|....    ..+...|++++.++.+
T Consensus        57 r~~~p~~~~le~~la~l~g~--~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~  134 (390)
T PRK08133         57 RFTNPTVTMFQERLAALEGA--EACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLT  134 (390)
T ss_pred             CCCChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCC
Confidence            34566678999999999995  46899999999999999999999999999999886433    3455689999999752


Q ss_pred             CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (422)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~  279 (422)
                           |+++++++++ +++|+|++++|+||||.+.+.+++.++++. |+++|+|++|....... ..    ..+..+++.
T Consensus       135 -----d~~~l~~~i~-~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~-pl----~~g~Divv~  203 (390)
T PRK08133        135 -----DLDAWRAAVR-PNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQ-PL----KLGADVVIH  203 (390)
T ss_pred             -----CHHHHHHhcC-cCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCC-ch----hhCCcEEEe
Confidence                 7899999997 789999999999999999999999999987 99999999987543221 11    123358899


Q ss_pred             cChhhhccccccc-eeeecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594          280 TFSKRAGLAGLRV-GYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFL  355 (422)
Q Consensus       280 S~SK~~~~~G~r~-G~i~~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~  355 (422)
                      |+||.++.+|.++ |++++++++++++......  ..+++..+..   +++.-+.+. +.++..+++..+.+.|++.+.+
T Consensus       204 S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~~---~l~gl~tl~~R~~~~~~~a~~la~~L~~~p~v  280 (390)
T PRK08133        204 SATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAWV---FLKGLETLSLRMEAHSANALALAEWLEAHPGV  280 (390)
T ss_pred             ecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHHH---HHcccchHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence            9999998888887 6777888887776644333  3345554443   333334555 7777888999999999987544

>PRK14012 cysteine desulfurase; Provisional

Probab=99.93  E-value=1.2e-23  Score=207.79  Aligned_cols=310  Identities=16%  Similarity=0.111  Sum_probs=209.3

Q ss_pred             EEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCC-----------cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           98 VKIDANENPYGPPPEVREALGQ-LK--FPYIYPD-----------PESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~-----------~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      +.|+.+... ++++.+.+++.+ +.  ....-+.           ....++|+++++++|.++++|++++|+++++++++
T Consensus         5 iyld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l   83 (404)
T PRK14012          5 IYLDYSATT-PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDNLAI   83 (404)
T ss_pred             EEecCcCCC-CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHH
Confidence            678776654 466888888865 21  1000010           12457899999999998899999999999999988


Q ss_pred             HHhc----CCCCEEEEcCCCchhHHHHH---HHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594          164 RCVL----DPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (422)
Q Consensus       164 ~~l~----~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (422)
                      .++.    ++||+|+++.++|+.....+   +..|++++.++.++++.+|+++++++++ ++++++++++++||||.+.|
T Consensus        84 ~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~-~~t~lv~~~~~~n~tG~~~~  162 (404)
T PRK14012         84 KGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMR-DDTILVSIMHVNNEIGVIQD  162 (404)
T ss_pred             HHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcC-CCCEEEEEECcCCCccchhh
Confidence            7763    78999999999997664433   3469999999987777899999999997 68999999999999999999


Q ss_pred             HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh-------
Q 014594          237 DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-------  308 (422)
Q Consensus       237 ~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~-------  308 (422)
                      .++|.++++. |+++|+|++++.....   . .+...+-.+++.|++|.+| |+ ++|+++++++....+...       
T Consensus       163 ~~~I~~la~~~g~~vivD~a~~~g~~~---~-~~~~~~~D~~~~s~~K~~g-p~-g~G~l~~~~~~~~~~~~~~~g~~~~  236 (404)
T PRK14012        163 IAAIGEICRERGIIFHVDAAQSVGKVP---I-DLSKLKVDLMSFSAHKIYG-PK-GIGALYVRRKPRVRLEAQMHGGGHE  236 (404)
T ss_pred             HHHHHHHHHHcCCEEEEEcchhcCCcc---c-CcccCCCCEEEEehhhccC-CC-ceEEEEEecCCCCCCCceecCCCcc
Confidence            9999999987 9999999999742211   1 1112234477779999776 43 589988876543222111       


Q ss_pred             --cCCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccC------CCceEEEEEeCCCCCHHHH
Q 014594          309 --KQPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYP------SYSNFILCEVTSGMDAKKL  378 (422)
Q Consensus       309 --~~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p------~~~~f~~~~~~~~~~~~~~  378 (422)
                        ....+.+.....+..++++. ..+.+ ..++.++.++++.+.|++++.+.+.+      ....++++.+.   +.+++
T Consensus       237 ~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~  313 (404)
T PRK14012        237 RGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYV---EGESL  313 (404)
T ss_pred             CCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCc---CHHHH
Confidence              01122333333333333322 12233 77788888999999998876544321      11224555543   34567


Q ss_pred             HHHHHhCCcEEEeCCCC-------------------CCCCeEEEEecC---hhhHHHHHHHHhh
Q 014594          379 KDDLAKMGVMIRHYNNK-------------------ELKGYVRVSVGK---PEHTDALMECLMH  420 (422)
Q Consensus       379 ~~~L~~~gI~v~~~~~~-------------------~~~~~iRis~~~---~~~~~~l~~al~~  420 (422)
                      ...|.  ++.|+.+...                   ...+.|||++..   .++.|++.++|+.
T Consensus       314 ~~~l~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~  375 (404)
T PRK14012        314 IMALK--DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRK  375 (404)
T ss_pred             HHhCC--CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            66663  6666544221                   124789999874   4566666666654

>PLN02651 cysteine desulfurase

Probab=99.93  E-value=9.2e-24  Score=205.73  Aligned_cols=304  Identities=18%  Similarity=0.134  Sum_probs=214.4

Q ss_pred             EcCCCCCCCCCCHHHHHHHhcC-CCCCCCCC-----------cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 014594           99 KIDANENPYGPPPEVREALGQL-KFPYIYPD-----------PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (422)
Q Consensus        99 ~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~-----------~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l  166 (422)
                      .|+.+... +.++.+++++.+. ......|.           .-..++|+.+++++|.++++|++|+|++++++.++..+
T Consensus         2 Yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~   80 (364)
T PLN02651          2 YLDMQATT-PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGV   80 (364)
T ss_pred             cccCcCCC-CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHH
Confidence            45554443 4678888888752 11111111           11457899999999998899999999999988877654


Q ss_pred             ----cCCCCEEEEcCCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594          167 ----LDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (422)
Q Consensus       167 ----~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~  239 (422)
                          .++||+|++....|+.+...   ....|++++.++.++++.+|+++++++++ ++++++++++++|+||.+.|.++
T Consensus        81 ~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~t~lv~v~~~~n~tG~~~~l~~  159 (364)
T PLN02651         81 MHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIR-PDTALVSVMAVNNEIGVIQPVEE  159 (364)
T ss_pred             HHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcC-CCcEEEEEECCCCCceecccHHH
Confidence                47899999999778654332   33579999999977777899999999997 68999999999999999999999


Q ss_pred             HHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh---------c
Q 014594          240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---------K  309 (422)
Q Consensus       240 l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~---------~  309 (422)
                      +.++++. |+++++|.+++....    ...+...+.++++.|..|.+|  ...+|+++++++....+...         .
T Consensus       160 I~~~~~~~g~~~~vD~a~~~g~~----~~~~~~~~~D~~~~s~hK~~g--p~G~g~l~v~~~~~~~l~p~~~g~~~~~~~  233 (364)
T PLN02651        160 IGELCREKKVLFHTDAAQAVGKI----PVDVDDLGVDLMSISGHKIYG--PKGVGALYVRRRPRVRLEPLMSGGGQERGR  233 (364)
T ss_pred             HHHHHHHcCCEEEEEcchhhCCc----ccCcccCCCCEEEechhhhCC--CCceEEEEEcCCCCCCCCccccCCCccCCc
Confidence            9999987 999999999984321    111223455688899999433  34589998887655443211         1


Q ss_pred             CCCCCcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHcc-CCCCccc-C---C--CceEEEEEeCCCCCHHHHHH
Q 014594          310 QPYNVSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKD-VPFLNPY-P---S--YSNFILCEVTSGMDAKKLKD  380 (422)
Q Consensus       310 ~~~~~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~-~~~~~~~-p---~--~~~f~~~~~~~~~~~~~~~~  380 (422)
                      ..++.+.....++.++|+.- +..+ +.++.++.++++.+.|++ ++.+.+. |   .  ....+.+.++ +.+++++..
T Consensus       234 ~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~-~~~~~~~~~  312 (364)
T PLN02651        234 RSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFA-YVEGESLLM  312 (364)
T ss_pred             cCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeC-CCCHHHHHH
Confidence            23566766666666666431 1224 778889999999999875 5445433 2   1  1336667776 678899999


Q ss_pred             HHHhCCcEEEeCCCC--C-----------------CCCeEEEEecChhhHHH
Q 014594          381 DLAKMGVMIRHYNNK--E-----------------LKGYVRVSVGKPEHTDA  413 (422)
Q Consensus       381 ~L~~~gI~v~~~~~~--~-----------------~~~~iRis~~~~~~~~~  413 (422)
                      .|.+  |.++.|...  .                 ..+.+|+|++.-.+.++
T Consensus       313 ~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~d  362 (364)
T PLN02651        313 GLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEE  362 (364)
T ss_pred             HhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHH
Confidence            9865  888866531  1                 13799999985443343

>PRK07503 methionine gamma-lyase; Provisional

Probab=99.93  E-value=3.7e-23  Score=203.07  Aligned_cols=216  Identities=16%  Similarity=0.170  Sum_probs=168.5

Q ss_pred             CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecC
Q 014594          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR  199 (422)
Q Consensus       124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~  199 (422)
                      .+|+++...+|++++++++|.+  ..+++++++.++..++.+++++||+|+++.|.|..    +...++..|++++.++.
T Consensus        60 ~r~~~p~~~~le~~lA~l~g~~--~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~  137 (403)
T PRK07503         60 SRISNPTLALLEQRMASLEGGE--AAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDL  137 (403)
T ss_pred             eCCCCchHHHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCC
Confidence            4567778899999999999974  35666778889999999899999999999998853    33345568999999875


Q ss_pred             CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (422)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~  278 (422)
                           .|+++++++++ +++|+|++++|+||||.+.+.++|.++++. |+++|+|++|...... ...    ..+.++++
T Consensus       138 -----~d~~~l~~~i~-~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~-~~l----~~g~Di~v  206 (403)
T PRK07503        138 -----TDPAALKAAIS-DKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQ-RPL----ELGADLVV  206 (403)
T ss_pred             -----CCHHHHHHhcC-ccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-Cch----hhCCCEEE
Confidence                 27899999997 689999999999999999999999999987 9999999999854322 112    12345899


Q ss_pred             ccChhhhcccc-ccceeeecCHHHHHHHHHh--cC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccC
Q 014594          279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA--KQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDV  352 (422)
Q Consensus       279 ~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~--~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~  352 (422)
                      .|+||.++.+| .+.|+++.+++++++++..  ..  ...++++.+..+...|   +.+. +.++..++...+.+.|+++
T Consensus       207 ~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L---~tl~~r~~~~~~na~~~a~~L~~~  283 (403)
T PRK07503        207 HSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGL---KTLALRMDRHCASAQAVAEWLARH  283 (403)
T ss_pred             ccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCc---chHHHHHHHHHHHHHHHHHHHHhC
Confidence            99999998765 7889999999988887632  22  2456666665555444   3344 6666678888999999887


Q ss_pred             CCC
Q 014594          353 PFL  355 (422)
Q Consensus       353 ~~~  355 (422)
                      +.+
T Consensus       284 p~v  286 (403)
T PRK07503        284 PAV  286 (403)
T ss_pred             CCc
Confidence            644

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=99.93  E-value=2.6e-23  Score=203.71  Aligned_cols=216  Identities=17%  Similarity=0.164  Sum_probs=169.2

Q ss_pred             CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecC
Q 014594          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR  199 (422)
Q Consensus       124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~  199 (422)
                      .+|+++....|+++++++.|. +++++ ++++++++.+++.+++++||+|+++.|+|..    +...+...|.+++.++.
T Consensus        55 ~R~~~p~~~~Le~~lA~l~g~-~~~v~-~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~  132 (405)
T PRK08776         55 TRSGNPTRDLLGEALAELEGG-AGGVI-TATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL  132 (405)
T ss_pred             cCCCChHHHHHHHHHHHHhCC-CceEE-EcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC
Confidence            456777788999999999996 34555 4555799999999999999999999999975    44455667888888874


Q ss_pred             CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (422)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~  278 (422)
                           .|++++++.++ +++|+|++++|+||||.+.+.+++.++++. |+++|+|++|...... ...    ..+..+++
T Consensus       133 -----~d~~~l~~~i~-~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~-~pl----~~gaDivv  201 (405)
T PRK08776        133 -----TDPRSLADALA-QSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQ-KPL----EFGADLVL  201 (405)
T ss_pred             -----CCHHHHHHhcC-cCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccC-Ccc----cccCCEEE
Confidence                 47899999997 689999999999999999999999999987 9999999999853211 111    12334899


Q ss_pred             ccChhhhccc-cccceeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594          279 RTFSKRAGLA-GLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP  353 (422)
Q Consensus       279 ~S~SK~~~~~-G~r~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~  353 (422)
                      .|.+|.++.+ ++..|++++ ++++.+++......  ++++++.+.++...+   +|++ +.++..++...+.+.|++++
T Consensus       202 ~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl---~tl~~r~~~~~~na~~la~~L~~~p  278 (405)
T PRK08776        202 HSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGL---RTLDARLRVHQENADAIAALLDGHA  278 (405)
T ss_pred             ecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh---CcHHHHHHHHHHHHHHHHHHHHcCC
Confidence            9999998755 467888877 57777777654433  456777766655444   5777 88899999999999999876


Q ss_pred             CC
Q 014594          354 FL  355 (422)
Q Consensus       354 ~~  355 (422)
                      .+
T Consensus       279 ~v  280 (405)
T PRK08776        279 AV  280 (405)
T ss_pred             Ce
Confidence            54

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=99.92  E-value=4.8e-23  Score=190.13  Aligned_cols=294  Identities=16%  Similarity=0.213  Sum_probs=190.4

Q ss_pred             CCC-CCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHH-HHH-HHHh----cC--------CCCEEEEcCCCchhHHHHH
Q 014594          124 YIY-PDP-ESRRLRAALAKDSGLESDHILVGCGADELI-DLI-MRCV----LD--------PGDKIVDCPPTFTMYEFDA  187 (422)
Q Consensus       124 ~~y-~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al-~~~-~~~l----~~--------~gd~Vl~~~p~y~~~~~~~  187 (422)
                      ..| +.. |.+++|+.+++.+|+++++|+++.+++-.+ .-+ .+++    ..        +.=+.|++.|+|..+..++
T Consensus        62 RNY~G~l~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~  141 (425)
T PF12897_consen   62 RNYPGGLDGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAIT  141 (425)
T ss_dssp             TSS-S-SS--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHH
T ss_pred             cCCCCccCChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHH
Confidence            668 443 799999999999999999999877765433 222 2222    11        1135799999999999999


Q ss_pred             HHcCCEEEEecCCCCCCCCHHHHHHHhh-cCCCeEEEEe-CCCCccCcCCCHHHHHHHHcC-----CCeEEEccCCcc--
Q 014594          188 AVNGAAVVKVPRKSDFSLNVELIADAVE-REKPKCIFLT-SPNNPDGSIINDEDLLKILEM-----PILVVLDEAYTE--  258 (422)
Q Consensus       188 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~~i~l~-~p~NPtG~~~~~e~l~~i~~~-----~~~li~Deay~~--  258 (422)
                      +.+|++.+.||+.++ ++|.|.+|+.+. .+..|.|+++ .-+||||.+++.|..++++..     +..|+-|.+|.-  
T Consensus       142 E~~Giemi~VpM~~d-GPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHh  220 (425)
T PF12897_consen  142 EHFGIEMIPVPMTED-GPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHH  220 (425)
T ss_dssp             HHCT-EEEEEEEETT-EE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-B
T ss_pred             HhhCcEEEecCCCCC-CCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEee
Confidence            999999999998665 899999999984 4678999866 558999999999999999975     899999999974  


Q ss_pred             ccCCCc------hhh---hhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHcc
Q 014594          259 FSGLES------RME---WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQ  327 (422)
Q Consensus       259 ~~~~~~------~~~---~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~  327 (422)
                      +..+..      .+.   ..+..++++.+.|.||.- .+|.+++++.++++.++.+.+...  ..+..-+.|..-...+.
T Consensus       221 L~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~aaS~~Nl~~~~~~~~~~tIgpdKvNQLRHvrff~  299 (425)
T PF12897_consen  221 LYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFFAASEANLAWIKKHLSVQTIGPDKVNQLRHVRFFK  299 (425)
T ss_dssp             SSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEEE-HHHHHHHHHHHHHH-S---HHHHHHHHHHHH
T ss_pred             ccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeeeecCHHHHHHHHHHhcCceeCccHHHHHHHHHHhc
Confidence            322211      111   123578899999999964 699999999999998888876543  45677889999999998


Q ss_pred             CCh-HH----H-HHHHHHHHHHHHHHHHcc-CC----CCc-ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-
Q 014594          328 NPI-YL----E-VKEALIKERERLFKLLKD-VP----FLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-  394 (422)
Q Consensus       328 ~~~-~~----~-~~~~~~~~~~~l~~~L~~-~~----~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~-  394 (422)
                      +.+ .+    + .++.++-+.+.+.+.|.+ ++    ... ..|.+|+|++++..++ .+.++.+.+++.||.+.+.+. 
T Consensus       300 d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G-~AkrvV~lakeAGV~LT~AGAt  378 (425)
T PF12897_consen  300 DAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDG-TAKRVVELAKEAGVALTPAGAT  378 (425)
T ss_dssp             SHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT--HHHHHHHHHHTTEE---TTTT
T ss_pred             ChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCC-hHHHHHHHHHHhCceeCCCCCC
Confidence            854 33    3 444455555555555543 33    222 3689999999999865 689999999999999997443 


Q ss_pred             -----CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          395 -----KELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       395 -----~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                           ...+..|||+.+.+. .++|..|++.+
T Consensus       379 fPyg~DP~D~nIRiAPS~P~-leel~~Am~~~  409 (425)
T PF12897_consen  379 FPYGKDPRDSNIRIAPSYPS-LEELETAMDVF  409 (425)
T ss_dssp             SGGG--TTS-EEEE--SSS--HHHHHHHHHHH
T ss_pred             CCCCCCCCCCcEEecCCCCC-HHHHHHHHHHH
Confidence                 344679999999876 58888888754

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=99.92  E-value=4.5e-23  Score=203.59  Aligned_cols=315  Identities=13%  Similarity=0.110  Sum_probs=213.8

Q ss_pred             CCCCCeEEcCCCCCCCC---CCHHHHHHHhc-CC---CCC-CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           92 RKPEDIVKIDANENPYG---PPPEVREALGQ-LK---FPY-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        92 ~~~~~~i~l~~~~~~~~---~~~~v~~al~~-~~---~~~-~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      .+++.++|+.++.....   .+|++.+++.+ +.   ... .++.+...+|.++++++.+.  +.+++++++++|++.++
T Consensus        38 ~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~SGs~A~e~al  115 (401)
T PRK00854         38 TDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALTGS--HKVLPMNSGAEAVETAI  115 (401)
T ss_pred             CCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHHHHH
Confidence            45678899877744333   37888887765 22   111 12334467899999999874  58999999999999999


Q ss_pred             HHhcC---------CC-CEEEEcCCCchhHHHHHHHcCC-------------EEEEecCCCCCCCCHHHHHHHhhcCCCe
Q 014594          164 RCVLD---------PG-DKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSDFSLNVELIADAVEREKPK  220 (422)
Q Consensus       164 ~~l~~---------~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~d~~~l~~~i~~~~~~  220 (422)
                      +.+..         +| ++|++...+|++....+...+.             .+..++     ..|++.+++.+. ++++
T Consensus       116 ~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~le~~i~-~~~~  189 (401)
T PRK00854        116 KAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP-----FGDAEALEAAIT-PNTV  189 (401)
T ss_pred             HHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC-----CCCHHHHHHHhC-CCeE
Confidence            97642         23 6788888888754433322221             122222     248999999997 6899


Q ss_pred             EEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhh--hhhcCCcEEEEccChhhhccccccce
Q 014594          221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVG  293 (422)
Q Consensus       221 ~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~~~G~r~G  293 (422)
                      +|++++|+||+|.+++    .+++.++|+. |+++|+||+|..+...+....  ..+.....++   ++|.++...+|+|
T Consensus       190 aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~---~~K~l~gg~~~ig  266 (401)
T PRK00854        190 AFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTL---IGKALSGGFYPVS  266 (401)
T ss_pred             EEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEE---ecccccCCccCeE
Confidence            9999999999999998    5666667765 999999999987755442211  1111222232   4698874337999


Q ss_pred             eeecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcc--cCCCceEEEEEe
Q 014594          294 YGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNP--YPSYSNFILCEV  369 (422)
Q Consensus       294 ~i~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~~f~~~~~  369 (422)
                      ++++++++++.+.....  .++.+++.+.++.++|+..+-.+..+.++++.+++.+.|++++...+  ....|.++.+.+
T Consensus       267 ~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~~~~i~~  346 (401)
T PRK00854        267 AVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIRSNIVREVRGRGLMLAVEL  346 (401)
T ss_pred             EEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhccCceEEEeccceEEEEEE
Confidence            99999999887753322  36678999999999886422111677888888999999988653211  234455555555


Q ss_pred             -CCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          370 -TSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       370 -~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                       ++..+..++.+.|.++||.+.+..    .+++|+++....+.+++++++++|
T Consensus       347 ~~~~~~~~~~~~~L~~~GV~v~~~~----~~~lR~~p~~~~t~e~i~~~i~~l  395 (401)
T PRK00854        347 EPEAGGARQYCEALKERGLLAKDTH----DHTIRLAPPLVITREQVDWALEQI  395 (401)
T ss_pred             ecCchhHHHHHHHHHHCCeEEecCC----CCEEEEeCCcccCHHHHHHHHHHH
Confidence             323457889999999999997643    479999975322234455555544

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=99.92  E-value=4.7e-23  Score=200.29  Aligned_cols=216  Identities=16%  Similarity=0.128  Sum_probs=170.3

Q ss_pred             CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh-HHHH---HHHcCCEEEEecC
Q 014594          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-YEFD---AAVNGAAVVKVPR  199 (422)
Q Consensus       124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~-~~~~---~~~~g~~~~~v~~  199 (422)
                      .+|+++....|++++|++.|  .+++++++|+++++..++.+++++||+|+++.|+|.. +...   ....|++++.++ 
T Consensus        48 ~R~~npt~~~Le~~lA~leg--~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd-  124 (388)
T PRK08861         48 TRSGNPNRGLLEQTLSELES--GKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVD-  124 (388)
T ss_pred             cCCCCchHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEEC-
Confidence            56788889999999999999  4799999999999999999999999999999999985 3322   233578888876 


Q ss_pred             CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (422)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~  278 (422)
                          ..|+++++++++ +++++|++++|+||||.+++.+++.++++. |+++|+|++|........ .    ..+..+++
T Consensus       125 ----~~d~e~l~~~i~-~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~p-l----~~GaDivv  194 (388)
T PRK08861        125 ----QSDAAALDAALA-KKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQKP-L----ELGADFVI  194 (388)
T ss_pred             ----CCCHHHHHHhcC-cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccCCC-c----ccCCCEEE
Confidence                258999999997 689999999999999999999999999987 999999999985432211 1    23455899


Q ss_pred             ccChhhhccc-cccceeeecC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594          279 RTFSKRAGLA-GLRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP  353 (422)
Q Consensus       279 ~S~SK~~~~~-G~r~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~  353 (422)
                      .|++|.++.+ ++..|+++++ +++.++++..+..  ..++++....+...|   +-+. +.++..++...+.+.|++.+
T Consensus       195 ~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl---~Tl~lR~~~~~~~a~~~a~~L~~~p  271 (388)
T PRK08861        195 HSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGI---RTLGARMRVHEESAQQILAYLQTQS  271 (388)
T ss_pred             eecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999987643 4678998874 5677767655444  345666655444444   4455 77888999999999999886


Q ss_pred             CC
Q 014594          354 FL  355 (422)
Q Consensus       354 ~~  355 (422)
                      .+
T Consensus       272 ~v  273 (388)
T PRK08861        272 LV  273 (388)
T ss_pred             Ce
Confidence            54

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=99.92  E-value=4.7e-23  Score=204.71  Aligned_cols=318  Identities=18%  Similarity=0.167  Sum_probs=211.7

Q ss_pred             CCCCCCeEEcCCCCCCC---CCCHHHHHHHhc-CCCCCCC--CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594           91 GRKPEDIVKIDANENPY---GPPPEVREALGQ-LKFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~~~---~~~~~v~~al~~-~~~~~~y--~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~  164 (422)
                      ..+++.++|+..+....   ..+|.+.+++.+ +.....|  +.++..+|+++|++++.. .++|++++|++++++.+++
T Consensus        44 d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~lae~l~~~~~~-~~~v~~~~sGseA~e~Alk  122 (423)
T TIGR00713        44 DVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTSYGAPTEAEILLAKEIISRVPS-VEMVRFVNSGTEATMSAVR  122 (423)
T ss_pred             eCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCCc-ccEEEEeCCHHHHHHHHHH
Confidence            34678899998886443   467889988876 3322233  556788999999999864 3689999999999999988


Q ss_pred             Hhc--CCCCEEEEcCCCchhHHHHHHH---cCCEEEEecCCC---------CC---CCCHHHHHHHhhc--CCCeEEEEe
Q 014594          165 CVL--DPGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRKS---------DF---SLNVELIADAVER--EKPKCIFLT  225 (422)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~---------~~---~~d~~~l~~~i~~--~~~~~i~l~  225 (422)
                      ...  ...++|+...++|+.+...+..   .|......+...         ..   ..|++++++.+.+  .++++|+++
T Consensus       123 ~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~e  202 (423)
T TIGR00713       123 LARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVE  202 (423)
T ss_pred             HHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEe
Confidence            532  2458999999999876543322   111111111000         00   1278999998863  467889887


Q ss_pred             -CCCCccCcCCCH----HHHHHHHcC-CCeEEEccCCccccCCCc-hhhhhhcCCcEEEEccChhhhccccccceeeecC
Q 014594          226 -SPNNPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (422)
Q Consensus       226 -~p~NPtG~~~~~----e~l~~i~~~-~~~li~Deay~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~  298 (422)
                       .|+| +|.+.+.    +++.++++. |+++|+||+|..|..+.. ........++   +.+|||.++ +|+|+||++++
T Consensus       203 p~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~~~pD---i~t~sK~l~-~G~pig~v~~~  277 (423)
T TIGR00713       203 PVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFGVEPD---LTTLGKIIG-GGLPVGAFGGR  277 (423)
T ss_pred             CCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHhCCCcc---hhhhhhhhc-CCCceeeeeEH
Confidence             7788 8988883    455556665 999999999998854221 1112222222   347999999 99999999999


Q ss_pred             HHHHHHHHHh-----cCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEe
Q 014594          299 LSIIEYLWRA-----KQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEV  369 (422)
Q Consensus       299 ~~~~~~l~~~-----~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~  369 (422)
                      +++++.+...     ...++.+++++.++.++|+   +.++.+ .++.....++.+.+.+++++........|.++.+.+
T Consensus       278 ~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~  357 (423)
T TIGR00713       278 REIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFF  357 (423)
T ss_pred             HHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEE
Confidence            9999888632     1346789999998888876   344666 777777788888888887765432233454544433


Q ss_pred             CC-C---------CC---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594          370 TS-G---------MD---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       370 ~~-~---------~~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  420 (422)
                      .. .         .+   ...+.+.|.++||.+.+..    .+.+|+++...  .+++.+++++
T Consensus       358 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~~l~~~~t--~~~i~~~~~~  415 (423)
T TIGR00713       358 TEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQ----FEACFLSAAHT--EEDIENTIEA  415 (423)
T ss_pred             ecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecCC----ccceeeECCCC--HHHHHHHHHH
Confidence            21 0         12   2357778889999987543    24688887532  2344444443

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=99.92  E-value=4.3e-23  Score=202.27  Aligned_cols=216  Identities=16%  Similarity=0.145  Sum_probs=170.8

Q ss_pred             CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCc----hhHHHHHHHcCCEEEEecC
Q 014594          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF----TMYEFDAAVNGAAVVKVPR  199 (422)
Q Consensus       124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y----~~~~~~~~~~g~~~~~v~~  199 (422)
                      .+|+++...+|+++++++.|.+  +.+++++++.++..++.+++++||+|+++...|    ..+...++..|++++.++.
T Consensus        65 ~r~~~p~~~~le~~lA~l~g~~--~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~  142 (403)
T PRK07810         65 SRYGNPTVSMFEERLRLIEGAE--ACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDG  142 (403)
T ss_pred             eCCCCchHHHHHHHHHHHhCCC--cEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECC
Confidence            4578888899999999999953  778888888999999988999999999887544    4555667778999999973


Q ss_pred             CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (422)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~  278 (422)
                           .|+++++++++ +++++|++++|+||||.+.+.+++.++++. |+++|+|++|........ .    ..+.++++
T Consensus       143 -----~d~~~l~~ai~-~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~-~----~~gaDivv  211 (403)
T PRK07810        143 -----EDLSQWEEALS-VPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRG-L----PLGADVVV  211 (403)
T ss_pred             -----CCHHHHHHhcC-cCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCCh-h----hcCCcEEE
Confidence                 38999999997 689999999999999999999999999987 999999999985443221 1    22456899


Q ss_pred             ccChhhhccccccc-eeeecCHHHHH-HHHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594          279 RTFSKRAGLAGLRV-GYGAFPLSIIE-YLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP  353 (422)
Q Consensus       279 ~S~SK~~~~~G~r~-G~i~~~~~~~~-~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~  353 (422)
                      .|++|.++..|.++ |+++++++.+. .+.....  ...++++.+..+...|+   .+. +.++..++..++.+.|++.+
T Consensus       212 ~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~---tl~~R~~~~~~~a~~~a~~L~~~p  288 (403)
T PRK07810        212 YSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKGLE---TLALRVRHSNASALRIAEFLEGHP  288 (403)
T ss_pred             ccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccC---cHHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999998778886 88888877664 3443222  24567777776666664   344 77778888888999999876


Q ss_pred             CC
Q 014594          354 FL  355 (422)
Q Consensus       354 ~~  355 (422)
                      .+
T Consensus       289 ~v  290 (403)
T PRK07810        289 AV  290 (403)
T ss_pred             Cc
Confidence            54

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=99.92  E-value=3.3e-23  Score=194.58  Aligned_cols=313  Identities=19%  Similarity=0.163  Sum_probs=227.9

Q ss_pred             EEcCCCCCCCCCCHHHHHHHhcC-CC--C-----CCCCCc---chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH-
Q 014594           98 VKIDANENPYGPPPEVREALGQL-KF--P-----YIYPDP---ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC-  165 (422)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~-~~--~-----~~y~~~---~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~-  165 (422)
                      |+||.+... +..|++.+++... ..  +     |.|+..   ..++-|+.+|+.+|+++++|++|+|+||+.+++++. 
T Consensus         3 iYlD~~ATT-p~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~   81 (386)
T COG1104           3 IYLDNAATT-PVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGA   81 (386)
T ss_pred             ccccccccC-CCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhh
Confidence            667766543 3468888888652 11  1     223211   145789999999999999999999999999999987 


Q ss_pred             -hcC----CCCEEEEcCCCchhHHHHHHH---cCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594          166 -VLD----PGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (422)
Q Consensus       166 -l~~----~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (422)
                       ...    .|..|+++.-.|+.....++.   .|.+|.++|.+.+..+|+++|+++++ ++|.+|.+.+.||.||.+.|.
T Consensus        82 ~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~-~~T~LVSim~aNnE~G~IQpI  160 (386)
T COG1104          82 ALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALR-PDTILVSIMHANNETGTIQPI  160 (386)
T ss_pred             HHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcC-CCceEEEEEecccCeeecccH
Confidence             322    467899999899866665555   49999999988888999999999998 789999999999999999999


Q ss_pred             HHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHH-HH------Hhc
Q 014594          238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY-LW------RAK  309 (422)
Q Consensus       238 e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~-l~------~~~  309 (422)
                      +++.++++. ++++++|.++...    ...-.+.....++...|-+|.+|..|  +|.++.++.+.-. +.      +-.
T Consensus       161 ~ei~~i~k~~~i~fHvDAvQa~G----kipi~~~~~~vD~ls~SaHK~~GpkG--iGaLyv~~~~~~~p~i~GGgQE~g~  234 (386)
T COG1104         161 AEIGEICKERGILFHVDAVQAVG----KIPIDLEELGVDLLSFSAHKFGGPKG--IGALYVRPGVRLEPLIHGGGQERGL  234 (386)
T ss_pred             HHHHHHHHHcCCeEEEehhhhcC----ceeccccccCcceEEeehhhccCCCc--eEEEEECCCCccCceeccCcCCCCC
Confidence            999999997 9999999998832    22222223234466677789988777  7888875543211 11      112


Q ss_pred             CCCCCcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccC-CCCcccCC----CceEEEEEeCCCCCHHHHHHHH
Q 014594          310 QPYNVSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDV-PFLNPYPS----YSNFILCEVTSGMDAKKLKDDL  382 (422)
Q Consensus       310 ~~~~~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~-~~~~~~p~----~~~f~~~~~~~~~~~~~~~~~L  382 (422)
                      +..+.|..+..+...+++.. +.++ ...++...|+++.+.|.+. +.+.+...    -.+.+.+.+| +...+.+...|
T Consensus       235 RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~-gv~gE~ll~~L  313 (386)
T COG1104         235 RSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFP-GVEGESLLLAL  313 (386)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeC-CCcHHHHHHhc
Confidence            33567788877777777653 3344 7788999999999999975 54444322    2355677887 77899999999


Q ss_pred             HhCCcEEEeCCCCC-------------------CCCeEEEEecChhhHHHHHHHHh
Q 014594          383 AKMGVMIRHYNNKE-------------------LKGYVRVSVGKPEHTDALMECLM  419 (422)
Q Consensus       383 ~~~gI~v~~~~~~~-------------------~~~~iRis~~~~~~~~~l~~al~  419 (422)
                      ..+||.+..|+.+.                   ..+.||||++...+.++++.+++
T Consensus       314 ~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~  369 (386)
T COG1104         314 DLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAE  369 (386)
T ss_pred             cccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHH
Confidence            99999999776611                   13689999985433344444443

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=99.92  E-value=6.9e-23  Score=202.25  Aligned_cols=321  Identities=12%  Similarity=0.094  Sum_probs=209.1

Q ss_pred             CCCCCeEEcCCCCCCCC---CCHHHHHHHhcC-C-CCCC---CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           92 RKPEDIVKIDANENPYG---PPPEVREALGQL-K-FPYI---YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        92 ~~~~~~i~l~~~~~~~~---~~~~v~~al~~~-~-~~~~---y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      .++++++|+..+.....   .+|++.+++.+. . ..+.   +..+....+++.++++.+.  +.+++++++++|++.++
T Consensus        28 ~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~SGs~A~e~al  105 (400)
T PTZ00125         28 VEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLFGY--DKVLPMNSGAEAGETAL  105 (400)
T ss_pred             CCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCCCC--CEEEEeCCcHHHHHHHH
Confidence            35678899988754433   578899888762 2 1111   1223456788888888764  58999999999999999


Q ss_pred             HHhcC----------CCCEEEEcCCCchhHHHHHHH-cCCEEEE---ecCCCC----CCCCHHHHHHHhhcCCCeEEEEe
Q 014594          164 RCVLD----------PGDKIVDCPPTFTMYEFDAAV-NGAAVVK---VPRKSD----FSLNVELIADAVEREKPKCIFLT  225 (422)
Q Consensus       164 ~~l~~----------~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~---v~~~~~----~~~d~~~l~~~i~~~~~~~i~l~  225 (422)
                      +....          .+++|+..+-.|+........ .+.....   .+...+    ...|++++++.++.+++++|+++
T Consensus       106 ~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~e  185 (400)
T PTZ00125        106 KFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVE  185 (400)
T ss_pred             HHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEc
Confidence            96631          347788888888754433222 2211110   010001    12389999999864679999999


Q ss_pred             CCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhhh--hhcCCcEEEEccChhhhccccccceeeecC
Q 014594          226 SPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (422)
Q Consensus       226 ~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~  298 (422)
                      +++||||.+++    .+++.++++. |+++|+||+|..+...+.....  ....+.++   ++||.++.+++|+||++++
T Consensus       186 p~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~---~~sK~l~~g~~~ig~v~~~  262 (400)
T PTZ00125        186 PIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIV---LLGKALSGGLYPISAVLAN  262 (400)
T ss_pred             CccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEE---EEcccccCCCcCcEEEEEc
Confidence            99999999998    6777777776 9999999999877543322111  11122222   4789998444599999999


Q ss_pred             HHHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCcccCCCceEEEEEeCC-
Q 014594          299 LSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPYPSYSNFILCEVTS-  371 (422)
Q Consensus       299 ~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~f~~~~~~~-  371 (422)
                      +++++.+....  ..++.+++.+.++.++|+.-.-....++.+++.+.+.+.|++    .+.+......|.++++.++. 
T Consensus       263 ~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~~  342 (400)
T PTZ00125        263 DDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDHS  342 (400)
T ss_pred             HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEecccEEEEEEEccC
Confidence            99998876433  246778888888877764311001334444455555555544    34333234567888888863 


Q ss_pred             -CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          372 -GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       372 -~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                       ..+..++.+.|.++||.+.++.    .+++||++....+.+++++++++|
T Consensus       343 ~~~~~~~~~~~l~~~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~l~~l  389 (400)
T PTZ00125        343 DGVNAWDLCLKLKENGLLAKPTH----DNIIRFAPPLVITKEQLDQALEII  389 (400)
T ss_pred             cchHHHHHHHHHHHCCeEEeecC----CCEEEEECCccCCHHHHHHHHHHH
Confidence             3467788999999999998754    579999965322234455555543

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=99.92  E-value=3e-22  Score=196.16  Aligned_cols=307  Identities=13%  Similarity=0.113  Sum_probs=204.8

Q ss_pred             CCCCCHHHHHHHhc-C-CCC-------CCCCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 014594          106 PYGPPPEVREALGQ-L-KFP-------YIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVD  175 (422)
Q Consensus       106 ~~~~~~~v~~al~~-~-~~~-------~~y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~  175 (422)
                      .+..+|+++++..+ + .++       ..|+.. ...+|++++++++|.+ +.+++++|.+... .++.+++++||.|++
T Consensus        10 gl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e-~al~~~sG~~a~~-~~i~~l~~~GD~Vl~   87 (392)
T PLN03227         10 STSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTE-SAILYSDGASTTS-STVAAFAKRGDLLVV   87 (392)
T ss_pred             CCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCC-cEEEecCcHHHHH-HHHHHhCCCCCEEEE
Confidence            34556777766554 2 111       224433 5789999999999964 6788888877777 566668999999999


Q ss_pred             cCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhh----------cCCCeEEEEeCCCCccCcCCCHHHHHHHHc
Q 014594          176 CPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE----------REKPKCIFLTSPNNPDGSIINDEDLLKILE  245 (422)
Q Consensus       176 ~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~----------~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~  245 (422)
                      +.+.|..+...+...+++++.++..+  .-|++.+.+.+.          ..++++|+++++.||+|.+.+.+++.++++
T Consensus        88 ~~~~h~s~~~~~~l~~~~~~~~~~~d--~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~  165 (392)
T PLN03227         88 DRGVNEALLVGVSLSRANVRWFRHND--MKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKE  165 (392)
T ss_pred             eccccHHHHHHHHHcCCeEEEeCCCC--HHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHH
Confidence            99999988877777888888776421  123444444442          136789999999999999999999999998


Q ss_pred             C-CCeEEEccCCccccCCC---chhhhh---hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCC--
Q 014594          246 M-PILVVLDEAYTEFSGLE---SRMEWV---KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNV--  314 (422)
Q Consensus       246 ~-~~~li~Deay~~~~~~~---~~~~~~---~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~--  314 (422)
                      . |+++|+||+|.....+.   ......   +..+.++++.|+||.+|   .+.|++++++++++.+.....  .++.  
T Consensus       166 ~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g---~~gg~v~~~~~~~~~~~~~~~~~~~~~~~  242 (392)
T PLN03227        166 EFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG---SVGGMTVGSEEVVDHQRLSGSGYCFSASA  242 (392)
T ss_pred             HcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh---ccCcEEecCHHHHHHHHHhCcCccccCCC
Confidence            7 99999999998221111   111211   12345789999999766   445999999998877754432  2433  


Q ss_pred             cHHHHHHHHHHccC-ChHHHHHHHHHHHHHHHHHHHccCCCCc----------ccCCCceEEEEEeCCCCC---------
Q 014594          315 SVAAEVAACAALQN-PIYLEVKEALIKERERLFKLLKDVPFLN----------PYPSYSNFILCEVTSGMD---------  374 (422)
Q Consensus       315 ~~~~~~aa~~~L~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~----------~~p~~~~f~~~~~~~~~~---------  374 (422)
                      ++..+.++.+++.. .+..+.+++++++.+++.+.|++.+...          .....++++.+.+.+...         
T Consensus       243 ~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~  322 (392)
T PLN03227        243 PPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLI  322 (392)
T ss_pred             CHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhH
Confidence            36666666666643 2222277788999999999997532110          112356778888753111         


Q ss_pred             HHHHHHHHHhCCcEEEeCCC-------CCCCCeEEEEecChhhHHHHHHHHh
Q 014594          375 AKKLKDDLAKMGVMIRHYNN-------KELKGYVRVSVGKPEHTDALMECLM  419 (422)
Q Consensus       375 ~~~~~~~L~~~gI~v~~~~~-------~~~~~~iRis~~~~~~~~~l~~al~  419 (422)
                      ..++.+.|.++|+.+.+...       ...+..+|+++...-+.++++++++
T Consensus       323 ~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~  374 (392)
T PLN03227        323 LDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLT  374 (392)
T ss_pred             HHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHH
Confidence            24788889999999975321       1225789999874333344444443

>PRK07050 cystathionine beta-lyase; Provisional

Probab=99.92  E-value=8.1e-23  Score=199.87  Aligned_cols=276  Identities=16%  Similarity=0.120  Sum_probs=198.6

Q ss_pred             CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEecC
Q 014594          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPR  199 (422)
Q Consensus       124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~  199 (422)
                      .+|+++...+|+++++++.|.  +++++++|+++++..++.+++++||+|+++.|+|..+..    .+...|++++.++.
T Consensus        60 ~r~~~pt~~~Le~~lA~l~g~--~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~  137 (394)
T PRK07050         60 GLHATPTSLALAQRLAEIEGG--RHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDP  137 (394)
T ss_pred             CCCCCHHHHHHHHHHHHHhCC--CeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECC
Confidence            456888889999999999994  589999999999999999999999999999999986553    45668999998873


Q ss_pred             CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (422)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~  278 (422)
                      .     +.+.+++.++ +++|+|++++|+||+|...+.+++.++++. |+++|+|++|.....- ..   . ..+.++++
T Consensus       138 ~-----~~~~l~~~i~-~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~-~~---l-~~GaDi~v  206 (394)
T PRK07050        138 L-----IGAGIADLIQ-PNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAF-KP---F-EHGVDISV  206 (394)
T ss_pred             C-----CHHHHHHhcC-CCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccccccc-CH---H-HcCCeEEE
Confidence            2     4578888887 789999999999999999999999999987 9999999999753321 11   1 23456999


Q ss_pred             ccChhhhcc-ccccceeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594          279 RTFSKRAGL-AGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP  353 (422)
Q Consensus       279 ~S~SK~~~~-~G~r~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~  353 (422)
                      .|++|.++. .+.+.|++++ ++++.++++..+..  .+.++.....+...|+   .+. +.++..++...+.+.|++.+
T Consensus       207 ~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~---tl~~Rl~~~~~~a~~la~~L~~~p  283 (394)
T PRK07050        207 QALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRGLP---SLQVRLAAHDRSALEVAEWLKARP  283 (394)
T ss_pred             EECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCC---cHHHHHHHHHHHHHHHHHHHHhCC
Confidence            999998752 3356887776 67888888755543  3456655544444333   233 67777788888999998765


Q ss_pred             CCc-c-cC----------------CCceEEEEEeCCC---CCHHHHHHHHHhCCcEEEeCCC-----------------C
Q 014594          354 FLN-P-YP----------------SYSNFILCEVTSG---MDAKKLKDDLAKMGVMIRHYNN-----------------K  395 (422)
Q Consensus       354 ~~~-~-~p----------------~~~~f~~~~~~~~---~~~~~~~~~L~~~gI~v~~~~~-----------------~  395 (422)
                      .+. + +|                ..+..+.+.+..+   .+.++|.+.|...++.+.-|+.                 .
T Consensus       284 ~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~  363 (394)
T PRK07050        284 EIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALELFAIGWSWGGACSLAMPYDVASMRTAKWP  363 (394)
T ss_pred             CccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCCCCeeccccCCccceEeeCcccccchhhcC
Confidence            432 1 12                1233445666432   3456777777666665543332                 0


Q ss_pred             CCCCeEEEEecChhhHHHHHH
Q 014594          396 ELKGYVRVSVGKPEHTDALME  416 (422)
Q Consensus       396 ~~~~~iRis~~~~~~~~~l~~  416 (422)
                      ..++.||||++.+.. |+|.+
T Consensus       364 ~~~~~iR~svGlE~~-~dl~~  383 (394)
T PRK07050        364 HRGTLVRLYIGLEDE-ADLIA  383 (394)
T ss_pred             CCCCEEEEEeCcCCH-HHHHH
Confidence            123689999997542 44433

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=99.92  E-value=5.1e-22  Score=188.05  Aligned_cols=308  Identities=19%  Similarity=0.162  Sum_probs=239.2

Q ss_pred             CCCCCCCHHHHHHHhcCCCCCCCCCcc--hHHHHHHHHHHcCCCC-CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCc
Q 014594          104 ENPYGPPPEVREALGQLKFPYIYPDPE--SRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF  180 (422)
Q Consensus       104 ~~~~~~~~~v~~al~~~~~~~~y~~~~--~~~lr~~la~~~~~~~-~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y  180 (422)
                      ..|.+.+++|++++..-..+++-|+..  ..++.+.+...++.+. +-++++++++.+++.++.++++|||+|++...+.
T Consensus        11 PGP~~v~~~V~~am~~~~~~h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~   90 (383)
T COG0075          11 PGPVPVPPRVLLAMARPMVGHRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGK   90 (383)
T ss_pred             CCCCCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCh
Confidence            456777899999998754445656652  6789999999999764 5677778899999999999999999999877765


Q ss_pred             h--hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhh-cCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCC
Q 014594          181 T--MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE-REKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY  256 (422)
Q Consensus       181 ~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay  256 (422)
                      .  .+..+++.+|++++.+..+++..+|+++++++++ .++.++|.++|...+||...|.++|.++++. |.++|+|.+-
T Consensus        91 FG~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVs  170 (383)
T COG0075          91 FGERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVS  170 (383)
T ss_pred             HHHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecc
Confidence            4  6778899999999999988888999999999997 3578899999999999999999999999997 9999999986


Q ss_pred             ccccCCCchhhhhhcCCcEEEEccChhhhcc-ccccceeeecCHHHHHHHHHh--------------------cCCCCCc
Q 014594          257 TEFSGLESRMEWVKKHDNLIVLRTFSKRAGL-AGLRVGYGAFPLSIIEYLWRA--------------------KQPYNVS  315 (422)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~r~G~i~~~~~~~~~l~~~--------------------~~~~~~~  315 (422)
                      +..+    ..-.+++++-++++.+-.|+++. ||  +|++..+++.++.+...                    ..+++++
T Consensus       171 S~Gg----~~~~vd~wgiDv~itgSQK~l~~PPG--la~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tpp  244 (383)
T COG0075         171 SLGG----EPLKVDEWGIDVAITGSQKALGAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPP  244 (383)
T ss_pred             cCCC----cccchhhcCccEEEecCchhccCCCc--cceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCC
Confidence            6322    11223456777999999999975 45  78888888877766532                    2246777


Q ss_pred             HHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC---c-eEEEEEeCCCCCHHHHHHHHH-hCCc
Q 014594          316 VAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY---S-NFILCEVTSGMDAKKLKDDLA-KMGV  387 (422)
Q Consensus       316 ~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~---~-~f~~~~~~~~~~~~~~~~~L~-~~gI  387 (422)
                      .....++..+|+.  .+.++ +.++++++.+.+++.++++|+-... ..   . .-..+..|++.+..++...++ ++|+
T Consensus       245 v~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~-~~~~~s~tvta~~~P~g~~~~~~~~~~~~~~g~  323 (383)
T COG0075         245 VNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFA-DPERRSPTVTAIKVPEGVDDKKVRRALLKEYGV  323 (383)
T ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCcccc-CcccCCCceEEEECCCCCCcHHHHHHHHHhCCE
Confidence            7777888888775  34467 9999999999999999999854332 22   2 334577888887666666666 6799


Q ss_pred             EEEeCCCCCCCCeEEEEecChhhHHHHHHHH
Q 014594          388 MIRHYNNKELKGYVRVSVGKPEHTDALMECL  418 (422)
Q Consensus       388 ~v~~~~~~~~~~~iRis~~~~~~~~~l~~al  418 (422)
                      .+.++..+..+..+||+.......+.+..++
T Consensus       324 ~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l  354 (383)
T COG0075         324 EIAGGQGPLKGKIFRIGHMGNVRPEDVLAAL  354 (383)
T ss_pred             EecccccccCccEEEEecCccCCHHHHHHHH
Confidence            9988887777889999975432233344333

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=99.92  E-value=1.4e-22  Score=198.18  Aligned_cols=278  Identities=18%  Similarity=0.142  Sum_probs=192.4

Q ss_pred             CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH-H---HHcCCEEEEecC
Q 014594          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD-A---AVNGAAVVKVPR  199 (422)
Q Consensus       124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~---~~~g~~~~~v~~  199 (422)
                      .+|+++...+|++++++++|.+. . ++++++++++..++.+++++||+|+++.|+|...... .   ...|+++..++.
T Consensus        56 ~r~~~p~~~~Le~~lA~~~g~~~-~-i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~  133 (388)
T PRK07811         56 ARTGNPTRTALEEQLAALEGGAY-G-RAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL  133 (388)
T ss_pred             cCCCCccHHHHHHHHHHHhCCCc-e-EEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC
Confidence            34677888999999999999753 3 4445668999999999999999999999999843322 2   225788777763


Q ss_pred             CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (422)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~  278 (422)
                           .|++++++.++ +++|+|++++|+||||.+.+.+++.++++. |+++|+|++|....... ..    ..+..+++
T Consensus       134 -----~d~e~l~~~i~-~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~-p~----~~gaDivv  202 (388)
T PRK07811        134 -----SDLDAVRAAIT-PRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQ-PL----ALGADVVV  202 (388)
T ss_pred             -----CCHHHHHHhcC-cCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCC-ch----hhCCcEEE
Confidence                 48999999997 689999999999999999999999999987 99999999998654321 11    12345999


Q ss_pred             ccChhhhcccc-ccceeeecC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594          279 RTFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP  353 (422)
Q Consensus       279 ~S~SK~~~~~G-~r~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~  353 (422)
                      .|++|.++.+| .+.||++++ +++.+.+...+..  ...++.....+...|+.   +. +.++..++...+.+.|++++
T Consensus       203 ~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~t---l~~R~~~~~~na~~la~~L~~~p  279 (388)
T PRK07811        203 HSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLKT---LAVRMDRHSENAEAVAEFLAGHP  279 (388)
T ss_pred             ecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc---HHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999987654 567998875 6676766654433  23455554444444443   44 66777888999999999876


Q ss_pred             CCc--ccCC----------------CceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCC------------C-------
Q 014594          354 FLN--PYPS----------------YSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNN------------K-------  395 (422)
Q Consensus       354 ~~~--~~p~----------------~~~f~~~~~~~~-~~~~~~~~~L~~~gI~v~~~~~------------~-------  395 (422)
                      .+.  .+|.                .|..+.+++.++ ..+.+|.+.|.--.+.+..|+.            .       
T Consensus       280 ~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~  359 (388)
T PRK07811        280 EVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCARTKVFTLAESLGGVESLIEHPSAMTHASTAGSQL  359 (388)
T ss_pred             CeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhCCcceeeccCCCCcceEeCCcccCcccCCHhhc
Confidence            543  2332                245677888532 1234455554321222221211            0       


Q ss_pred             -CCCCeEEEEecChhhHHHHHHHH
Q 014594          396 -ELKGYVRVSVGKPEHTDALMECL  418 (422)
Q Consensus       396 -~~~~~iRis~~~~~~~~~l~~al  418 (422)
                       -.++.||||++.+.. ++|.+-+
T Consensus       360 gi~~~liR~svGlE~~-~dl~~dl  382 (388)
T PRK07811        360 EVPDDLVRLSVGIEDV-ADLLADL  382 (388)
T ss_pred             CCCCCEEEEEeCCCCH-HHHHHHH
Confidence             014689999997653 4454443

>PRK05968 hypothetical protein; Provisional

Probab=99.91  E-value=1.2e-22  Score=198.71  Aligned_cols=272  Identities=19%  Similarity=0.174  Sum_probs=200.8

Q ss_pred             CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecCC
Q 014594          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRK  200 (422)
Q Consensus       125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~  200 (422)
                      +|+++...+|++++++++|.+  ..+++++++.++..++.+++++||+|+++.+.|..    +...+...|++++.++. 
T Consensus        59 r~~~p~~~~le~~lA~l~g~~--~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~-  135 (389)
T PRK05968         59 RGDNPTVRAFEEMLAKLEGAE--DARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG-  135 (389)
T ss_pred             CCCChhHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC-
Confidence            445666889999999999974  34455666789999998899999999999999974    33456668999998873 


Q ss_pred             CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (422)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~  279 (422)
                          .|++++++.+  +++|+|++++|.||++.+.+.+++.++++. |+++|+|++|..+..... .    ..+..+++.
T Consensus       136 ----~d~~~l~~~i--~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p-~----~~g~Divv~  204 (389)
T PRK05968        136 ----RDEEAVAKAL--PGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQRP-I----TLGVDLVIH  204 (389)
T ss_pred             ----CCHHHHHHhc--ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccCc-h----hcCCcEEEe
Confidence                2889999988  468999999999999999999999999987 999999999976543221 1    123458889


Q ss_pred             cChhhhcccc-ccceeeecCHHHHHHHHHhcCC---CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC
Q 014594          280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP---YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF  354 (422)
Q Consensus       280 S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~~~~---~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~  354 (422)
                      |++|.++.+| .+.|++++++++++++.....+   ..++++.+..+...|+.   +. +.++..++.+++.+.|++++.
T Consensus       205 S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t---l~~r~~~~~~~a~~la~~L~~~p~  281 (389)
T PRK05968        205 SASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSPFEAWLLLRGLRT---LPLRMKAHEASALEIARRLKAHPV  281 (389)
T ss_pred             eccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCChHHHHHHHcccCc---HHHHHHHHHHHHHHHHHHHHhCCC
Confidence            9999988654 5789999999988887754332   35666666666555543   34 667777789999999998876


Q ss_pred             Cc-c-cC-----------CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC----------------------C-CC
Q 014594          355 LN-P-YP-----------SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK----------------------E-LK  398 (422)
Q Consensus       355 ~~-~-~p-----------~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~----------------------~-~~  398 (422)
                      +. + +|           ..+..+.+++.++.+..+|.+.|...++.+.-|+..                      + .+
T Consensus       282 v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~~~~~s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~  361 (389)
T PRK05968        282 VERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADALKLFRLGVSWGGHESLVVPAEVVLQQKAQPNSAARFGVSP  361 (389)
T ss_pred             ccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhCCccEEecCCCCCCceeeeCcccccccCCHHHHHhcCCCC
Confidence            53 3 24           224467778764556778888887666666533321                      1 15


Q ss_pred             CeEEEEecChhhHHHH
Q 014594          399 GYVRVSVGKPEHTDAL  414 (422)
Q Consensus       399 ~~iRis~~~~~~~~~l  414 (422)
                      +.||+|++.+.. ++|
T Consensus       362 ~liR~SvGlE~~-~dl  376 (389)
T PRK05968        362 RSVRLHVGLEGT-EAL  376 (389)
T ss_pred             CeEEEEeccCCH-HHH
Confidence            799999997543 444

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=99.91  E-value=1.6e-22  Score=197.62  Aligned_cols=308  Identities=21%  Similarity=0.235  Sum_probs=224.1

Q ss_pred             EcCCCCCCCCCCHHHHHHHhcC-C----CC--CCCC-Cc----chHHHHHHHHHHcCCCC-CCEEEeCCHHHHHHHHHHH
Q 014594           99 KIDANENPYGPPPEVREALGQL-K----FP--YIYP-DP----ESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRC  165 (422)
Q Consensus        99 ~l~~~~~~~~~~~~v~~al~~~-~----~~--~~y~-~~----~~~~lr~~la~~~~~~~-~~i~~~~G~~~al~~~~~~  165 (422)
                      .|+.+... +.|+.+++++.+. .    .+  ..+. ..    ...+.|+.+++++|.++ ++|++++|++.+++.++.+
T Consensus         2 Yld~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~   80 (371)
T PF00266_consen    2 YLDNAGTG-PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASS   80 (371)
T ss_dssp             EEBTSSS--B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHH
T ss_pred             EeeCCCcc-CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhc
Confidence            45444333 4567888888762 1    11  1111 11    14589999999999988 8999999999999999999


Q ss_pred             h---cCCCCEEEEcCCCchhHH----HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHH
Q 014594          166 V---LDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (422)
Q Consensus       166 l---~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e  238 (422)
                      +   +++||+|++..-.|+...    ..++..|+++..++.+.+..+|++++++.+. ++++++++++.+|.||...|.+
T Consensus        81 l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~-~~~~lv~~~~~~~~tG~~~pi~  159 (371)
T PF00266_consen   81 LLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALN-PDTRLVSISHVENSTGVRNPIE  159 (371)
T ss_dssp             HHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHH-TTESEEEEESBETTTTBBSSHH
T ss_pred             cccccccccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhc-cccceEEeecccccccEEeeec
Confidence            8   789999999999997444    4455689999999876677899999999997 8999999999999999999999


Q ss_pred             HHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC------
Q 014594          239 DLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP------  311 (422)
Q Consensus       239 ~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~------  311 (422)
                      ++.++++. |+++++|.+++.....    -.+...+.++++.|..|..|.+|  +|+++++++.++++......      
T Consensus       160 ~I~~~~~~~~~~~~vD~~~~~g~~~----id~~~~~~D~~~~s~~Kl~gp~G--~g~l~v~~~~~~~~~p~~~~~~~~~~  233 (371)
T PF00266_consen  160 EIAKLAHEYGALLVVDAAQSAGCVP----IDLDELGADFLVFSSHKLGGPPG--LGFLYVRPEAIERLRPAKPGGGYLDF  233 (371)
T ss_dssp             HHHHHHHHTTSEEEEE-TTTTTTSS------TTTTTESEEEEESTSTTSSST--EEEEEEEHHHHHHHHTSSSSSSTTTH
T ss_pred             eehhhhhccCCceeEechhcccccc----ccccccccceeeecccccCCCCc--hhhheehhhhhhcccccccccccccc
Confidence            99999987 9999999999843321    11233455588999999444444  79999999999888422211      


Q ss_pred             -----------------CCCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCccc-----CCCceEEE
Q 014594          312 -----------------YNVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPY-----PSYSNFIL  366 (422)
Q Consensus       312 -----------------~~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-----p~~~~f~~  366 (422)
                                       .+.+.....++..+++.-  ..++ ++++..+..+++.+.|++++.+.+.     +..+..+.
T Consensus       234 ~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~  313 (371)
T PF00266_consen  234 PSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVS  313 (371)
T ss_dssp             HHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEE
T ss_pred             ccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEE
Confidence                             145555555555555432  2234 7888999999999999998876652     22345666


Q ss_pred             EEeCCCCCHHHHHHHHHhCCcEEEeCCCCC--------CCCeEEEEecChhhHHHHH
Q 014594          367 CEVTSGMDAKKLKDDLAKMGVMIRHYNNKE--------LKGYVRVSVGKPEHTDALM  415 (422)
Q Consensus       367 ~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~--------~~~~iRis~~~~~~~~~l~  415 (422)
                      +.++ +.+.+++.+.|.++||.++.|....        ..+.||||+..-.+.++++
T Consensus       314 ~~~~-~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~  369 (371)
T PF00266_consen  314 FNLP-GSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVD  369 (371)
T ss_dssp             EEET-TSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHH
T ss_pred             Eeec-CCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHh
Confidence            7775 7789999999998899999965432        3589999987433334443

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]

Probab=99.91  E-value=1.2e-22  Score=186.08  Aligned_cols=285  Identities=16%  Similarity=0.257  Sum_probs=212.3

Q ss_pred             CCCC-cchHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHHHHHHhcC-CCCEEEEcCCCchhHHHHHHHcCCEEEE
Q 014594          125 IYPD-PESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVLD-PGDKIVDCPPTFTMYEFDAAVNGAAVVK  196 (422)
Q Consensus       125 ~y~~-~~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al~~~~~~l~~-~gd~Vl~~~p~y~~~~~~~~~~g~~~~~  196 (422)
                      .|.+ .|.+-+|+.+|++.    |  .+|++|++|.|++.++..++..++. +.+.|+++-|.|+.|......+|+..+.
T Consensus       108 aYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~~~~~v~  187 (475)
T KOG0258|consen  108 AYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLLGGTQVP  187 (475)
T ss_pred             ccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHhCCcccc
Confidence            4654 47889999999997    3  4788999999999999999998754 6688999999999999888888887766


Q ss_pred             ec--CCCCCCCCHHHHHHHhhc----CCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc-h
Q 014594          197 VP--RKSDFSLNVELIADAVER----EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-R  265 (422)
Q Consensus       197 v~--~~~~~~~d~~~l~~~i~~----~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~-~  265 (422)
                      +-  .+.+|.+|.++|++.+.+    -+++++++.||.||||.+.+.+-+++|.++    +++++.||+|.+-.+... .
T Consensus       188 YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~sk  267 (475)
T KOG0258|consen  188 YYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSK  267 (475)
T ss_pred             eeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcc
Confidence            54  567899999999988754    468999999999999999999999999875    999999999998765431 1


Q ss_pred             hhh-------hh-cCC---cEEEEccChhhh-ccccccceeeec---CHHHHHHHHHhcCC-CCCcHHHHHHHHHHccCC
Q 014594          266 MEW-------VK-KHD---NLIVLRTFSKRA-GLAGLRVGYGAF---PLSIIEYLWRAKQP-YNVSVAAEVAACAALQNP  329 (422)
Q Consensus       266 ~~~-------~~-~~~---~~i~~~S~SK~~-~~~G~r~G~i~~---~~~~~~~l~~~~~~-~~~~~~~~~aa~~~L~~~  329 (422)
                      ...       .. .+.   .++.++|.||.+ |=.|.|.||+=.   +++..+.+.+.... ...+..+|...-..+.-+
T Consensus       268 FhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~VnPP  347 (475)
T KOG0258|consen  268 FHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVVNPP  347 (475)
T ss_pred             hHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhhceecCCC
Confidence            111       11 122   246678889985 447899999765   66777766655443 445555666555555421


Q ss_pred             --------hH---HH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEE--eCC---------CCCHHHH-HHHHH-
Q 014594          330 --------IY---LE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCE--VTS---------GMDAKKL-KDDLA-  383 (422)
Q Consensus       330 --------~~---~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~--~~~---------~~~~~~~-~~~L~-  383 (422)
                              .+   .+ +.+.++++.+.+.+.++.+.++.. .+.+++|++-+  +|.         +...+.| +..|+ 
T Consensus       348 ~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe  427 (475)
T KOG0258|consen  348 KPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLE  427 (475)
T ss_pred             CCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHH
Confidence                    11   12 667788889999999999988875 45677888854  442         3344455 34455 


Q ss_pred             hCCcEEEeCCCCCC---CCeEEEEecChh
Q 014594          384 KMGVMIRHYNNKEL---KGYVRVSVGKPE  409 (422)
Q Consensus       384 ~~gI~v~~~~~~~~---~~~iRis~~~~~  409 (422)
                      ..||.+.||+.++.   .=++|.++-.+.
T Consensus       428 ~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~  456 (475)
T KOG0258|consen  428 ATGICVVPGSGFGQKEGTYHFRTTILPPG  456 (475)
T ss_pred             hcCeEEecCCCCCCCCceeEEEEeecCch
Confidence            78999999998543   238999986554

>PRK08064 cystathionine beta-lyase; Provisional

Probab=99.91  E-value=3.3e-22  Score=195.60  Aligned_cols=277  Identities=15%  Similarity=0.207  Sum_probs=194.7

Q ss_pred             CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh-H---HHHHHHcCCEEEEecCCCC
Q 014594          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-Y---EFDAAVNGAAVVKVPRKSD  202 (422)
Q Consensus       127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~-~---~~~~~~~g~~~~~v~~~~~  202 (422)
                      .++...+|++++++++|.+ +.+++++| +.++..++. ++++||+|+++.|.|+. +   ...++..|++++.++.   
T Consensus        52 ~~p~~~~le~~lA~l~g~~-~~v~~~sG-~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~---  125 (390)
T PRK08064         52 GNPTREALEDIIAELEGGT-KGFAFASG-MAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDM---  125 (390)
T ss_pred             CChhHHHHHHHHHHHhCCC-CeEEECCH-HHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECC---
Confidence            4556789999999999975 45665555 668888886 78999999999998863 2   3445668999999985   


Q ss_pred             CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccC
Q 014594          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (422)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~  281 (422)
                        .|++.+++.++ +++++|++++|+||||.+.+.+++.++++. |+++|+|++|..+.... ..    ..+.++++.|+
T Consensus       126 --~d~~~l~~~l~-~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~-~~----~~g~Divv~S~  197 (390)
T PRK08064        126 --TNLEEVAQNIK-PNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQK-PL----DLGADVVLHSA  197 (390)
T ss_pred             --CCHHHHHHhcC-CCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccC-ch----hhCCcEEEeec
Confidence              27899999997 689999999999999999999999999987 99999999998654221 11    23456899999


Q ss_pred             hhhhcc-ccccceeeec-CHHHHHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCc--
Q 014594          282 SKRAGL-AGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLN--  356 (422)
Q Consensus       282 SK~~~~-~G~r~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~--  356 (422)
                      +|.++. +|...|++++ ++++++.+...+.+++.....+.+.. ++..-+.+. +.++..++...+.+.|++++.+.  
T Consensus       198 tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l-~~~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v  276 (390)
T PRK08064        198 TKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWL-VLRGLKTLHVRLEHSSETANKIALYLQEHPKVQNV  276 (390)
T ss_pred             ceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHH-HHcccCcHHHHHHHHHHHHHHHHHHHhcCCCcceE
Confidence            998753 3345676666 56888988888777665443333333 333334455 77888899999999998875432  


Q ss_pred             ccC----------------CCceEEEEEeCCCCCHHHHHHHHHhCCc---EEEeCC------------C----------C
Q 014594          357 PYP----------------SYSNFILCEVTSGMDAKKLKDDLAKMGV---MIRHYN------------N----------K  395 (422)
Q Consensus       357 ~~p----------------~~~~f~~~~~~~~~~~~~~~~~L~~~gI---~v~~~~------------~----------~  395 (422)
                      .+|                ..|..+.+++.   +.+++.+.+...++   .++.|+            .          .
T Consensus       277 ~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~---~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~  353 (390)
T PRK08064        277 YYPGLQTHLGFDIQQSQATSAGAVLSFTLQ---SEEAVRQFVSHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDER  353 (390)
T ss_pred             ECCCCCCCccHHHHHHhCCCcceEEEEEEC---CHHHHHHHHHhCCcceEcccCCCCcceeECCcccccccCCHHHHHhc
Confidence            112                23456777774   23444444445565   333331            0          0


Q ss_pred             CC-CCeEEEEecCh---hhHHHHHHHHhhh
Q 014594          396 EL-KGYVRVSVGKP---EHTDALMECLMHL  421 (422)
Q Consensus       396 ~~-~~~iRis~~~~---~~~~~l~~al~~l  421 (422)
                      +. ++.+|+|++-+   +.+++|.+||+.+
T Consensus       354 gi~~~liR~SvGle~~~dli~dl~~Al~~~  383 (390)
T PRK08064        354 GITDGLLRLSVGLENVDDLIADFEQALSYV  383 (390)
T ss_pred             CCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence            11 57899999853   3455666666543

>PLN02955 8-amino-7-oxononanoate synthase

Probab=99.91  E-value=1.1e-21  Score=191.73  Aligned_cols=311  Identities=18%  Similarity=0.131  Sum_probs=215.3

Q ss_pred             CCCCeEEcCCCC-CCCCCCHHHHHHHhcC--CCCCC-------CCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           93 KPEDIVKIDANE-NPYGPPPEVREALGQL--KFPYI-------YPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        93 ~~~~~i~l~~~~-~~~~~~~~v~~al~~~--~~~~~-------y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      ..+++++|++|+ -.+..+|+++++..+.  .++.+       ++.. -..+|+++||+++|.  +..++.+++..+.-.
T Consensus       100 ~~r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~--e~all~sSGy~AN~~  177 (476)
T PLN02955        100 RFKKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKK--EDCLVCPTGFAANMA  177 (476)
T ss_pred             CCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCC--CcEEEECChHHHHHH
Confidence            346789998874 4567788888776552  22211       1111 246899999999995  345555555556656


Q ss_pred             HHHHh--------------cCCCCEEEEcCCCchhHHHHHHHc----CCEEEEecCCCCCCCCHHHHHHHhhc--CCCeE
Q 014594          162 IMRCV--------------LDPGDKIVDCPPTFTMYEFDAAVN----GAAVVKVPRKSDFSLNVELIADAVER--EKPKC  221 (422)
Q Consensus       162 ~~~~l--------------~~~gd~Vl~~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~  221 (422)
                      ++.++              .+++|.|+...-.|......++..    +++++.++     +.|++.|++.+++  .+.++
T Consensus       178 ~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~-----HND~~~Le~~L~~~~~~~~~  252 (476)
T PLN02955        178 AMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYR-----HCDMYHLNSLLSSCKMKRKV  252 (476)
T ss_pred             HHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeC-----CCCHHHHHHHHHhCCCCceE
Confidence            66655              245677888888998888887776    57777776     4588999988853  23456


Q ss_pred             EEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeee
Q 014594          222 IFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGA  296 (422)
Q Consensus       222 i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~  296 (422)
                      |++....+++|.+.+.+++.+|++. |+++|+||+|..+..+..   .....+ ..+.+++++||||++|..|   ||++
T Consensus       253 Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~G---Gfi~  329 (476)
T PLN02955        253 VVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCHG---GFIA  329 (476)
T ss_pred             EEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhccC---ceee
Confidence            6666889999999999999999987 999999999998764432   222222 2467799999999987666   9999


Q ss_pred             cCHHHHHHHHHhcCCC----CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC
Q 014594          297 FPLSIIEYLWRAKQPY----NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS  371 (422)
Q Consensus       297 ~~~~~~~~l~~~~~~~----~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~  371 (422)
                      ++.++++.+......+    ..++....++.++++...... .+++++++.+++.+.   .++ .   ..+..+.+.+.+
T Consensus       330 gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~---~G~-~---~~sPI~pI~ig~  402 (476)
T PLN02955        330 CSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKAL---SGV-D---ISSPIISLVVGN  402 (476)
T ss_pred             cHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh---cCC-C---CCCCEEEEEeCC
Confidence            9999999888766653    233444445555553321112 667777887777774   232 1   236677777765


Q ss_pred             CCCHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEecC---hhhHHHHHHHHhh
Q 014594          372 GMDAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVGK---PEHTDALMECLMH  420 (422)
Q Consensus       372 ~~~~~~~~~~L~~~gI~v~~~~~---~~~~~~iRis~~~---~~~~~~l~~al~~  420 (422)
                      ...+.++.+.|+++||.+.+..+   +.....+||+++.   .++++++.++|..
T Consensus       403 ~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~  457 (476)
T PLN02955        403 QEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSS  457 (476)
T ss_pred             HHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHH
Confidence            55667789999999999997666   3445689999973   5556666666654

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=99.91  E-value=6.1e-22  Score=193.14  Aligned_cols=215  Identities=19%  Similarity=0.185  Sum_probs=164.3

Q ss_pred             CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH---HHcCCEEEEecCCC
Q 014594          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKS  201 (422)
Q Consensus       125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~  201 (422)
                      +|+++...+|++++++++|.  +++++++|+++|+..++.+++++||+|+++.|.|..+...+   ...|+++..+.   
T Consensus        49 r~~np~~~~lE~~lA~l~g~--~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~---  123 (385)
T PRK08574         49 REENPTLRPLEEALAKLEGG--VDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY---  123 (385)
T ss_pred             CCCCccHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC---
Confidence            45677889999999999995  47888899999999999999999999999999998766554   34677777653   


Q ss_pred             CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEcc
Q 014594          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT  280 (422)
Q Consensus       202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S  280 (422)
                         .|++++++++++.++|+|++++|+||||.+++.+++.++++. |+++|+|++|...... ...    ..+.++++.|
T Consensus       124 ---~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~-~~l----~~GaDivv~S  195 (385)
T PRK08574        124 ---PSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLY-RPL----RHGADFVVHS  195 (385)
T ss_pred             ---CCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC-Chh----hhCCcEEEee
Confidence               468999999973389999999999999999999999999987 9999999999643211 111    2345699999


Q ss_pred             Chhhhcccccc-ceeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594          281 FSKRAGLAGLR-VGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFL  355 (422)
Q Consensus       281 ~SK~~~~~G~r-~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~  355 (422)
                      ++|.++.+|-. .|++++ ++++.++++..+..  ..++++....+...|+   .+. +.++..++...+.+.|++++.+
T Consensus       196 ~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~---tL~~R~~~~~~na~~la~~L~~~p~v  272 (385)
T PRK08574        196 LTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLK---TLEVRFERQCRNAMAIAEFLSEHPKV  272 (385)
T ss_pred             CceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccC---cHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence            99998766654 474554 77888877655443  3455555444444443   344 6677778889999999887644

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=99.91  E-value=5.4e-22  Score=195.85  Aligned_cols=163  Identities=18%  Similarity=0.193  Sum_probs=137.5

Q ss_pred             CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecC
Q 014594          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR  199 (422)
Q Consensus       124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~  199 (422)
                      .+|+++...+|++++++++|.  +..++++++++++..++.+++++||+|+++.+.|+.    +...++..|++++.++.
T Consensus        52 sr~~~p~~~~le~~lA~l~g~--~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~  129 (418)
T TIGR01326        52 SRLMNPTTDVLEQRIAALEGG--VAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDP  129 (418)
T ss_pred             ECCCChhHHHHHHHHHHHhCC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECC
Confidence            456777789999999999995  468889999999999999899999999999999864    33445678999999984


Q ss_pred             CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (422)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~  278 (422)
                      +     |++++++.++ +++++|++++|+||||.+.+.+++.++++. |+++|+|++|...... .   .. ..+.++++
T Consensus       130 ~-----d~~~l~~~l~-~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~~-~---~l-~~g~Divv  198 (418)
T TIGR01326       130 D-----DPEEFEKAID-ENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYLC-R---PI-DHGADIVV  198 (418)
T ss_pred             C-----CHHHHHHhcC-cCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhcC-C---ch-hcCCeEEE
Confidence            2     8999999997 689999999999999999999999999987 9999999999743211 1   11 24568999


Q ss_pred             ccChhhhccccccceeeecCH
Q 014594          279 RTFSKRAGLAGLRVGYGAFPL  299 (422)
Q Consensus       279 ~S~SK~~~~~G~r~G~i~~~~  299 (422)
                      .|+||.++.+|+|+||+++++
T Consensus       199 ~S~sK~l~g~G~~lGg~v~~~  219 (418)
T TIGR01326       199 HSATKYIGGHGTAIGGVIVDG  219 (418)
T ss_pred             ECccccccCCccceEEEEEec
Confidence            999999998999999999854

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.90  E-value=2.7e-21  Score=187.57  Aligned_cols=251  Identities=19%  Similarity=0.198  Sum_probs=184.2

Q ss_pred             CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC-CC
Q 014594          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DF  203 (422)
Q Consensus       126 y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~  203 (422)
                      +..+...++++++++++|.  +++++++|+++++..++.++ +++||+|+++.++|..+...+...|++++.++.+. ++
T Consensus        15 ~~~~~~~~~~~~la~~~~~--~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   92 (352)
T cd00616          15 TLGPKVREFEKAFAEYLGV--KYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLLGATPVFVDIDPDTY   92 (352)
T ss_pred             cCCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCCCcC
Confidence            3455688999999999995  47888899999999999988 68999999999999998888888999999999765 68


Q ss_pred             CCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccC-CCchhhhhhcCCcEEEEccC
Q 014594          204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKKHDNLIVLRTF  281 (422)
Q Consensus       204 ~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~-~~~~~~~~~~~~~~i~~~S~  281 (422)
                      .+|++.+++.++ +++++|+++|   ++|...+.+++.++++. |+++|+|++|..... .+....   .. ..+.+.||
T Consensus        93 ~~d~~~l~~~i~-~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~---~~-~d~~~~S~  164 (352)
T cd00616          93 NIDPELIEAAIT-PRTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVG---TF-GDAGAFSF  164 (352)
T ss_pred             CcCHHHHHHhcC-cCCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcc---cC-cceeEEcC
Confidence            899999999996 7899999764   69999999999999987 999999999985431 111111   11 13566676


Q ss_pred             h--hhhccccccceeeecC-HHHHHHHHHhcCC-----------------CCCcHHHHHHHHHHccCChHHH-HHHHHHH
Q 014594          282 S--KRAGLAGLRVGYGAFP-LSIIEYLWRAKQP-----------------YNVSVAAEVAACAALQNPIYLE-VKEALIK  340 (422)
Q Consensus       282 S--K~~~~~G~r~G~i~~~-~~~~~~l~~~~~~-----------------~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~  340 (422)
                      +  |.+  ++.+.|+++.+ +++.+.+......                 +.++.+....+...+   +.++ ..++.++
T Consensus       165 ~~~K~~--~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l---~~~~~~~~~~~~  239 (352)
T cd00616         165 HPTKNL--TTGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQL---EKLDEIIARRRE  239 (352)
T ss_pred             CCCCCC--cccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHH---HhhHHHHHHHHH
Confidence            6  866  34456888775 5777766543211                 112333333333222   2234 6677788


Q ss_pred             HHHHHHHHHccCCCCcccC-CC-----ceEEEEEeCC--CCCHHHHHHHHHhCCcEEEe
Q 014594          341 ERERLFKLLKDVPFLNPYP-SY-----SNFILCEVTS--GMDAKKLKDDLAKMGVMIRH  391 (422)
Q Consensus       341 ~~~~l~~~L~~~~~~~~~p-~~-----~~f~~~~~~~--~~~~~~~~~~L~~~gI~v~~  391 (422)
                      +.+++.+.|++++.+.+.. ..     ...+.+.+++  +.+.+++.+.|.++||.+..
T Consensus       240 ~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~  298 (352)
T cd00616         240 IAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRV  298 (352)
T ss_pred             HHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeee
Confidence            9999999999876555432 11     1344566664  57899999999999998763

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=99.90  E-value=7.6e-22  Score=195.72  Aligned_cols=326  Identities=12%  Similarity=0.082  Sum_probs=207.1

Q ss_pred             CCCCCCeEEcCCCCCCC---CCCHHHHHHHhc-CCC-CCC-CC---CcchHHHHHHHHHHcCCCC-CCEEEeCCHHHHHH
Q 014594           91 GRKPEDIVKIDANENPY---GPPPEVREALGQ-LKF-PYI-YP---DPESRRLRAALAKDSGLES-DHILVGCGADELID  160 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~~~---~~~~~v~~al~~-~~~-~~~-y~---~~~~~~lr~~la~~~~~~~-~~i~~~~G~~~al~  160 (422)
                      ..+++.++|+..+....   ..+|++.+++.+ +.. .+. ++   .+...++-+.+++..+.+. ++++++++++++++
T Consensus        37 d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e  116 (425)
T PRK08088         37 DVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVE  116 (425)
T ss_pred             eCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHH
Confidence            34677899998874333   247888877765 221 111 12   2234466666666665433 47888888888888


Q ss_pred             HHHHHhc--CCCCEEEEcCCCchhHHHHHHHcCCEEE--------------E--ecCCCCCCCC----HHHHHHHhh---
Q 014594          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVV--------------K--VPRKSDFSLN----VELIADAVE---  215 (422)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~--------------~--v~~~~~~~~d----~~~l~~~i~---  215 (422)
                      .+++...  .....|+...++|++....+...+....              .  +|.+.+ +.+    ++.+++.+.   
T Consensus       117 ~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~l~~~l~~~~  195 (425)
T PRK08088        117 NAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLH-GVSEDDAIASIERIFKNDA  195 (425)
T ss_pred             HHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCcccc-CccHHHHHHHHHHHHHhcc
Confidence            8877432  2235677779999876655544332211              1  121111 122    556888775   


Q ss_pred             -cCCCeEEEEe-CCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcccc
Q 014594          216 -REKPKCIFLT-SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG  289 (422)
Q Consensus       216 -~~~~~~i~l~-~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G  289 (422)
                       ..+..+|++. ..+++.+...+.+.+++|.+.    ++++|+||+|.++...+... .+...+.+..+.||||.++ +|
T Consensus       196 ~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~-~~~~~~~~pdi~s~sK~l~-~G  273 (425)
T PRK08088        196 APEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLF-AMEQMGVAADLTTFAKSIA-GG  273 (425)
T ss_pred             CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh-HHhhcCCCCCEEEEecccc-CC
Confidence             2467788877 445666566677766666553    99999999999876544322 2222333455789999998 99


Q ss_pred             ccceeeecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHccCC---hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCce
Q 014594          290 LRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNP---IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSN  363 (422)
Q Consensus       290 ~r~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~---~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~  363 (422)
                      +|+||+++++++++.+.....  .++.+++.+.++.++|+..   +.++ +++..++.++.+.+.+.+.+.+......|.
T Consensus       274 ~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G~  353 (425)
T PRK08088        274 FPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGLGA  353 (425)
T ss_pred             CcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccce
Confidence            999999999999988765433  3678999999999998753   3444 444444444555544455554332334489


Q ss_pred             EEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          364 FILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       364 f~~~~~~~~--------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ++|+.+.++        .....+.+.+.++||.+.++...  .+.+|++++...+.+++.++++++
T Consensus       354 ~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~iRl~~~~~~t~~ei~~~i~~l  417 (425)
T PRK08088        354 MIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGLEII  417 (425)
T ss_pred             EEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCC--CCEEEEECCCCcCHHHHHHHHHHH
Confidence            999998422        23677888888999998865432  488999998433235566666554

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.90  E-value=1.2e-21  Score=191.33  Aligned_cols=268  Identities=20%  Similarity=0.241  Sum_probs=189.4

Q ss_pred             HHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHH
Q 014594          111 PEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAA  188 (422)
Q Consensus       111 ~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~  188 (422)
                      ++..+++.+ +..+..++++...+|++++++++|.+  +++.++|+++++.+++.++ +++||+|+++.|+|..+...+.
T Consensus        14 ~~e~~~~~~~l~~~~~~~g~~~~~le~~la~~~g~~--~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~~   91 (379)
T PRK11658         14 DEELAAVKEVLRSGWITTGPKNQALEQAFCQLTGNQ--HAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNMIV   91 (379)
T ss_pred             HHHHHHHHHHHHcCCccCCHhHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHHH
Confidence            333555554 33334456667899999999999974  6888999999999999998 8999999999999999888888


Q ss_pred             HcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCCch
Q 014594          189 VNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESR  265 (422)
Q Consensus       189 ~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~~~  265 (422)
                      ..|++++.++.+ +++.+|++.+++.++ +++|+|+   |+|++|...+.+++.++++. |+++|+|++|.... +.+..
T Consensus        92 ~~G~~~v~vd~~~~~~~~d~~~l~~~i~-~~tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~  167 (379)
T PRK11658         92 LLGATPVMVDVDRDTLMVTPEAIEAAIT-PRTKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRH  167 (379)
T ss_pred             HcCCEEEEEecCCCcCCcCHHHHHHhcc-cCCeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCee
Confidence            899999999965 456799999999997 6899988   66779999999999999987 99999999998533 22222


Q ss_pred             hhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcCC------------------------CCCcHHHHH
Q 014594          266 MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP------------------------YNVSVAAEV  320 (422)
Q Consensus       266 ~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~------------------------~~~~~~~~~  320 (422)
                      .   ...+.  .+.||++...+++.+.|+++.+ +++.++++.....                        ++.......
T Consensus       168 ~---g~~g~--~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~  242 (379)
T PRK11658        168 I---GARGT--AIFSFHAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADIN  242 (379)
T ss_pred             c---CCCCC--EEEeCCCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHH
Confidence            2   22222  4556665444566788988874 7888777643211                        011111122


Q ss_pred             HHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCC----ceEE-EEEeCC---CCCHHHHHHHHHhCCcEEE
Q 014594          321 AACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSY----SNFI-LCEVTS---GMDAKKLKDDLAKMGVMIR  390 (422)
Q Consensus       321 aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~----~~f~-~~~~~~---~~~~~~~~~~L~~~gI~v~  390 (422)
                      |+....+. +.++ ..++.+++.+++.+.|+++++..+ .|..    ..++ .+.++.   +.+.+++.+.|.++||.++
T Consensus       243 AAl~~~ql-~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~  321 (379)
T PRK11658        243 AAIALVQL-AKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERCGISRDALMEALKERGIGTG  321 (379)
T ss_pred             HHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccccCCHHHHHHHHHHCCCCCc
Confidence            23222222 2344 667777778888888888764432 2221    2233 244442   4578999999999999876

>PRK09028 cystathionine beta-lyase; Provisional

Probab=99.90  E-value=2.2e-21  Score=188.46  Aligned_cols=234  Identities=16%  Similarity=0.082  Sum_probs=176.0

Q ss_pred             CCCCCHHHHHHHhcC-CCCCCCC---CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch
Q 014594          106 PYGPPPEVREALGQL-KFPYIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT  181 (422)
Q Consensus       106 ~~~~~~~v~~al~~~-~~~~~y~---~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~  181 (422)
                      .++.++++.++..+. ...+.|.   ++....||++++++.+.  +++++++|+++|+..++.+++++||+|++++|.|.
T Consensus        34 ~~~~~~~~~~~~~~~~~~~~~Y~r~~npt~~~Le~~iA~le~~--~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~  111 (394)
T PRK09028         34 VFDTVAEMRHAAKNRANGEMFYGRRGTPTHFAFQAAIVELEGG--AGTALYPSGAAAISNALLSFLKAGDHLLMVDSCYE  111 (394)
T ss_pred             ccCCHHHHHHHhccCccCCceecCCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCcH
Confidence            455556666555432 1224453   34567999999999864  57999999999999999999999999999999997


Q ss_pred             hHHHH----HHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCC
Q 014594          182 MYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY  256 (422)
Q Consensus       182 ~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay  256 (422)
                      .+...    ....|+++..++..     |.+.+++.++ +++|+|++++|+||||.+.+.+++.++++. |+++|+|++|
T Consensus       112 ~t~~l~~~~l~~~Gi~v~~v~~~-----~~e~l~~~l~-~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~  185 (394)
T PRK09028        112 PTRDLCDKILKGFGIETTYYDPM-----IGEGIRELIR-PNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTW  185 (394)
T ss_pred             HHHHHHHHhhhhcceEEEEECCC-----CHHHHHHhcC-cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCc
Confidence            66543    34578888877632     4678998886 789999999999999999999999999987 9999999999


Q ss_pred             ccccCCCchhhhhhcCCcEEEEccChhhhccc-cccceeeecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH
Q 014594          257 TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE  333 (422)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-G~r~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~  333 (422)
                      .....- .+    ...+.++++.|.+|.++.. ++..|+++.++++.+.+......  ..+++.....+...|+   -+.
T Consensus       186 a~p~~~-~P----l~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~---TL~  257 (394)
T PRK09028        186 ASPINS-RP----FEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQCTSPDDVYLAMRGLR---TLG  257 (394)
T ss_pred             cccccC-Cc----cccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccC---cHH
Confidence            843211 11    1456679999999987433 46678888888877777644332  3456666555544443   356


Q ss_pred             -HHHHHHHHHHHHHHHHccCCCC
Q 014594          334 -VKEALIKERERLFKLLKDVPFL  355 (422)
Q Consensus       334 -~~~~~~~~~~~l~~~L~~~~~~  355 (422)
                       +.++..++...+.+.|++.+.+
T Consensus       258 lR~~~~~~na~~la~~L~~~p~v  280 (394)
T PRK09028        258 VRLAQHEKNALKVANWLATRPEV  280 (394)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCc
Confidence             8888999999999999998755

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=99.90  E-value=6.2e-22  Score=191.51  Aligned_cols=279  Identities=17%  Similarity=0.170  Sum_probs=194.2

Q ss_pred             CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCE-EEEecCCCC
Q 014594          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA-VVKVPRKSD  202 (422)
Q Consensus       124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~-~~~v~~~~~  202 (422)
                      .+|+++...+|+++++++.+  .+++++++|+++|+.+++. ++++||+|+++.+.|............. -+.+    .
T Consensus        49 ~R~~~p~~~~le~~lA~leg--~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~----~  121 (364)
T PRK07269         49 TRTKNPTRAKLEETLAAIES--ADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHF----T  121 (364)
T ss_pred             eCCCCccHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcCcEEE----E
Confidence            56788889999999999998  4699999999999999995 6799999999999996443332221000 0111    2


Q ss_pred             CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccC
Q 014594          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (422)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~  281 (422)
                      +..|+++++++++ +++|+|++++|+||||.+.+.+++.++++. |+++|+|++|...... ...    ..+..+++.|+
T Consensus       122 ~~~d~~~l~~~i~-~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~-~pl----~~gaDivv~S~  195 (364)
T PRK07269        122 YANTEEELIAAIE-EDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQ-RPI----ELGADIVLHSA  195 (364)
T ss_pred             ecCCHHHHHHhcC-cCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-Cch----hhCCcEEEecC
Confidence            3468999999997 789999999999999999999999999987 9999999997532211 122    23445999999


Q ss_pred             hhhhcccc-ccceeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCc
Q 014594          282 SKRAGLAG-LRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLN  356 (422)
Q Consensus       282 SK~~~~~G-~r~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~  356 (422)
                      +|.++..| .=.|++++ ++++.++++..+..  ..++++....+...|+.   ++ +.++.+++...+.+.|++.+.+.
T Consensus       196 tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~t---L~~r~~~~~~na~~~a~~L~~~p~v~  272 (364)
T PRK07269        196 TKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLKT---LSLRMERSTANAQEVVAFLKKSPAVK  272 (364)
T ss_pred             ceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc---HHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence            99886433 23578787 56777777654432  35677777766666654   55 77888999999999999887553


Q ss_pred             --ccCCCceEEEEEeCCCCCHHHHHHHHHhC----------CcEEEeCCC-------------CCCCCeEEEEecChhhH
Q 014594          357 --PYPSYSNFILCEVTSGMDAKKLKDDLAKM----------GVMIRHYNN-------------KELKGYVRVSVGKPEHT  411 (422)
Q Consensus       357 --~~p~~~~f~~~~~~~~~~~~~~~~~L~~~----------gI~v~~~~~-------------~~~~~~iRis~~~~~~~  411 (422)
                        .+|..|..+.+.+........|.+.|.-.          .+.+.|...             .-.++.||+|++.+. .
T Consensus       273 ~v~ypg~gg~~sf~~~~~~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGlE~-~  351 (364)
T PRK07269        273 EVLYTGKGGMISFKVADETRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGIED-A  351 (364)
T ss_pred             EEeCCCcCcEEEEEECCHHHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCC-H
Confidence              45777777777774212233444444311          122222211             012468999999765 3


Q ss_pred             HHHHHHHh
Q 014594          412 DALMECLM  419 (422)
Q Consensus       412 ~~l~~al~  419 (422)
                      ++|.+-|+
T Consensus       352 ~dli~dl~  359 (364)
T PRK07269        352 RDLIADLK  359 (364)
T ss_pred             HHHHHHHH
Confidence            55544443

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=99.90  E-value=2.3e-21  Score=188.95  Aligned_cols=272  Identities=19%  Similarity=0.214  Sum_probs=195.1

Q ss_pred             CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEecCCCC
Q 014594          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSD  202 (422)
Q Consensus       127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~  202 (422)
                      +++...+|++.+++++|.  ++++++++++.++..++. ++++||+|+++.+.|..+..    .+...|++++.++.   
T Consensus        45 ~~p~~~~le~~la~l~g~--~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~---  118 (378)
T TIGR01329        45 GNPTRTALESLLAKLDKA--DRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT---  118 (378)
T ss_pred             CChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC---
Confidence            345578999999999996  567777777889998887 78999999999999986543    34568999999985   


Q ss_pred             CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccC
Q 014594          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (422)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~  281 (422)
                        .|+++++++++ +++|+|++++|+||+|.+.+.+++.++++. |+++|+|++|..... ....    ..+.++++.|+
T Consensus       119 --~d~~~le~~i~-~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~-~~~l----~~g~Di~v~S~  190 (378)
T TIGR01329       119 --TDLDKVKAALG-PKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLL-CNPL----ELGADIVYHSA  190 (378)
T ss_pred             --CCHHHHHHhcC-cCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc-CChh----hcCCcEEEEec
Confidence              37999999997 789999999999999999999999999987 999999999853221 1111    12345999999


Q ss_pred             hhhhcc-ccccceeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCc
Q 014594          282 SKRAGL-AGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLN  356 (422)
Q Consensus       282 SK~~~~-~G~r~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~  356 (422)
                      +|.++. .+++.|++++ ++++.+++......  ...++.....+   +...+.+. +.++..++...+.+.|++++.+.
T Consensus       191 tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~---~~~l~tl~~R~e~~~~na~~la~~L~~~~~v~  267 (378)
T TIGR01329       191 TKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLL---LRGIKTLAIRIEKQQENARAIAMFLSTHPRVK  267 (378)
T ss_pred             ceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHH---HccCCCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence            997753 3477899988 45566767655442  34455544322   33334445 77888888888888988765432


Q ss_pred             --ccC----------------CCceEEEEEeCCCCC-HHHHHHHHHhCCcEEEeCCCC----------------------
Q 014594          357 --PYP----------------SYSNFILCEVTSGMD-AKKLKDDLAKMGVMIRHYNNK----------------------  395 (422)
Q Consensus       357 --~~p----------------~~~~f~~~~~~~~~~-~~~~~~~L~~~gI~v~~~~~~----------------------  395 (422)
                        .+|                ..+..+.+++ ++.+ +.+|.+.|...+|.++.|+..                      
T Consensus       268 ~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~-~~~~~~~~~~~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~  346 (378)
T TIGR01329       268 KVRYAGLPSHPGFHLHFSQAKGAGSVLSFET-GSVALSKRLVEATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREER  346 (378)
T ss_pred             EEECCCCCCCccHHHHHHhCCCcceEEEEEE-CCHHHHHHHHHhCcCcccccCCCCCCceeeCCCccccccCCHHHHHhc
Confidence              121                1235667777 3444 678889997777777755430                      


Q ss_pred             -CCCCeEEEEecChhhHHHHHHH
Q 014594          396 -ELKGYVRVSVGKPEHTDALMEC  417 (422)
Q Consensus       396 -~~~~~iRis~~~~~~~~~l~~a  417 (422)
                       -.++.||+|++.+. .|+|.+-
T Consensus       347 gi~~~liR~svGlE~-~~dl~~d  368 (378)
T TIGR01329       347 GLPEDLVRLSVGIED-VDDLISD  368 (378)
T ss_pred             CCCCCeEEEEeccCC-HHHHHHH
Confidence             01468999999754 3444433

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=99.90  E-value=1.9e-21  Score=189.19  Aligned_cols=267  Identities=17%  Similarity=0.193  Sum_probs=185.2

Q ss_pred             HHHHHHHhc-CCCCCCCC-CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHH
Q 014594          111 PEVREALGQ-LKFPYIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDA  187 (422)
Q Consensus       111 ~~v~~al~~-~~~~~~y~-~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~  187 (422)
                      ++..+++.+ +..+..+. .+-..++++.++++++.  +++++++|+++++.+++.++ ++|||+|+++.++|..+...+
T Consensus        11 ~~e~~a~~~~~~~~~~~~~g~~~~~~e~~la~~~g~--~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~   88 (376)
T TIGR02379        11 GQELEYIAEAISEGKLSGDGPFSRRCETWLENRTGT--KKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAF   88 (376)
T ss_pred             HHHHHHHHHHHHcCCccCCcHHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH
Confidence            444566665 33333333 23367889999999875  58999999999999999887 899999999999999988888


Q ss_pred             HHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCCc
Q 014594          188 AVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLES  264 (422)
Q Consensus       188 ~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~~  264 (422)
                      ...|++++.++.+. ++.+|+++++++++ +++|+|+   |+||+|...+.+++.++++. |++||+|++|+.+. +++.
T Consensus        89 ~~~G~~~v~vd~d~~~~~~d~~~le~~i~-~~tk~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~  164 (376)
T TIGR02379        89 VLRGAKIVFVDIRPDTMNIDETLIESAIT-HRTKAIV---PVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGR  164 (376)
T ss_pred             HHcCCEEEEEecCCCcCCCCHHHHHHhcC-cCceEEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccCCc
Confidence            88999999999764 47899999999997 6899987   77789999999999999997 99999999998764 3332


Q ss_pred             hhhhhhcCCcEEEEccC--hhhhccccccceeeecC-HHHHHHHHHhcCC-----------------------CCCcHHH
Q 014594          265 RMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP-----------------------YNVSVAA  318 (422)
Q Consensus       265 ~~~~~~~~~~~i~~~S~--SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~-----------------------~~~~~~~  318 (422)
                      ....+.    .+.+.||  +|.+. +|.+.|+++++ +++.+++...+..                       +.++.+.
T Consensus       165 ~~g~~~----~~~~fSf~~~K~l~-~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~  239 (376)
T TIGR02379       165 ALGSIG----HLGTFSFHETKNYT-SGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQ  239 (376)
T ss_pred             ccCCCC----CEEEEeCCCCCcCc-ccCCceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHH
Confidence            222211    1334444  37775 67789998875 7888877754321                       1122233


Q ss_pred             HHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC---CCcc--cCCCc----eEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014594          319 EVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP---FLNP--YPSYS----NFILCEVTSGMDAKKLKDDLAKMGVM  388 (422)
Q Consensus       319 ~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~---~~~~--~p~~~----~f~~~~~~~~~~~~~~~~~L~~~gI~  388 (422)
                      .+.+...|   +.++ ..++.++..++..+.|.++.   ....  .+.+.    .++++.+++..+.+++.+.|.++||.
T Consensus       240 Aa~g~~qL---~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~r~~l~~~L~~~gI~  316 (376)
T TIGR02379       240 AAYLWAQL---EQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKDEDDRNELIKYLKEQEIM  316 (376)
T ss_pred             HHHHHHHH---HHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECCcCCHHHHHHHHHHCCCC
Confidence            22232333   2333 44444555555666665542   1111  12221    12356776545789999999999999


Q ss_pred             EEe
Q 014594          389 IRH  391 (422)
Q Consensus       389 v~~  391 (422)
                      ++.
T Consensus       317 ~~~  319 (376)
T TIGR02379       317 AVF  319 (376)
T ss_pred             ccc
Confidence            874

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=99.90  E-value=3.7e-21  Score=187.86  Aligned_cols=264  Identities=17%  Similarity=0.179  Sum_probs=188.1

Q ss_pred             HHHHhc-CCCCCCCCCcc-hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHHHc
Q 014594          114 REALGQ-LKFPYIYPDPE-SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVN  190 (422)
Q Consensus       114 ~~al~~-~~~~~~y~~~~-~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~  190 (422)
                      .+++.+ +..+..|+... ..++++.+++++|.  +++++++|+++++.+++..+ +++||+|+++.|+|..+...+...
T Consensus        14 ~~~~~~~l~~~~~~g~~~~~~~~e~~la~~~g~--~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~~~~   91 (375)
T PRK11706         14 LDYIQQAMSSGKLCGDGGFTRRCQQWLEQRFGS--AKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLR   91 (375)
T ss_pred             HHHHHHHHHcCCccCCCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHc
Confidence            445544 33334555443 46788889999886  58999999999999987765 789999999999999999999999


Q ss_pred             CCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCCchhh
Q 014594          191 GAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRME  267 (422)
Q Consensus       191 g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~~~~~  267 (422)
                      |++++.++.++ ++.+|++++++.++ +++|+|+++|   ++|...+.+++.++++. |++||+|++|+.+. +++....
T Consensus        92 G~~~v~~d~d~~~~~~d~~~le~~i~-~~tk~i~~~~---~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g  167 (375)
T PRK11706         92 GAKIVFVDIRPDTMNIDETLIEAAIT-PKTRAIVPVH---YAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALG  167 (375)
T ss_pred             CCEEEEEecCCCcCCcCHHHHHHhcC-CCCeEEEEeC---CCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeee
Confidence            99999999654 46899999999997 6899999764   69999999999999987 99999999998775 3332222


Q ss_pred             hhhcCCcEEEEccCh--hhhccccccceeeecCHHHHHHHHHhcCC-------------------CCCc----HHHHHHH
Q 014594          268 WVKKHDNLIVLRTFS--KRAGLAGLRVGYGAFPLSIIEYLWRAKQP-------------------YNVS----VAAEVAA  322 (422)
Q Consensus       268 ~~~~~~~~i~~~S~S--K~~~~~G~r~G~i~~~~~~~~~l~~~~~~-------------------~~~~----~~~~~aa  322 (422)
                      ..   . .+.+.||+  |.++ +|.+.++++.++++.+++...+..                   ++.+    .+..+.+
T Consensus       168 ~~---~-~~~~~Sf~~~K~l~-~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~  242 (375)
T PRK11706        168 TI---G-HIGCFSFHETKNYT-AGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYL  242 (375)
T ss_pred             cC---c-CEEEEeCCCCcccc-ccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHH
Confidence            21   1 24445554  9886 588888888888888876654421                   1122    1222222


Q ss_pred             HHHccCChHHH-HHHHHHHHHHHHHHHHccCC---CCcc--cCCC----ceEEEEEeCCCCCHHHHHHHHHhCCcEEEe
Q 014594          323 CAALQNPIYLE-VKEALIKERERLFKLLKDVP---FLNP--YPSY----SNFILCEVTSGMDAKKLKDDLAKMGVMIRH  391 (422)
Q Consensus       323 ~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~---~~~~--~p~~----~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~  391 (422)
                      ...|   +.++ ..++.+++.+++.+.|.+++   .+..  .+.+    ..++++.++++.+.+++.+.|.++||.++.
T Consensus       243 ~~ql---~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~gI~~~~  318 (375)
T PRK11706        243 WAQL---EAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDLEDRSALINFLKEAGIMAVF  318 (375)
T ss_pred             HHHH---HHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCcCCHHHHHHHHHHCCCCccc
Confidence            2223   2234 55566667777777777764   2321  1222    224567776566889999999999999764

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.90  E-value=2.7e-21  Score=190.78  Aligned_cols=214  Identities=17%  Similarity=0.157  Sum_probs=161.6

Q ss_pred             CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecCCC
Q 014594          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKS  201 (422)
Q Consensus       126 y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~  201 (422)
                      ++++....|+++++++.|.  +..++++|+++++..++..++++||+|+++.+.|+.    +...++..|++++.++.  
T Consensus        61 ~~~p~~~~Le~~lA~leg~--~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~--  136 (431)
T PRK08248         61 IMNPTTDVFEKRIAALEGG--IGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP--  136 (431)
T ss_pred             CCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC--
Confidence            3566678999999999994  578889999999999999899999999999998853    33456678999999984  


Q ss_pred             CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEcc
Q 014594          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT  280 (422)
Q Consensus       202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S  280 (422)
                         .|+++++++++ +++++|++++|+||||.+++.+++.++++. |+++|+|++|....    ....+ ..+.++++.|
T Consensus       137 ---~d~e~l~~ai~-~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~----~~~pl-~~gaDivv~S  207 (431)
T PRK08248        137 ---SDPENFEAAIT-DKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPY----LLRPI-EHGADIVVHS  207 (431)
T ss_pred             ---CCHHHHHHhcC-CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccc----cCChh-HcCCCEEEEc
Confidence               38999999997 689999999999999999999999999987 99999999986211    11111 3567799999


Q ss_pred             ChhhhccccccceeeecC-HHHH-----------------------H----------HHHHh--cCCCCCcHHHHHHHHH
Q 014594          281 FSKRAGLAGLRVGYGAFP-LSII-----------------------E----------YLWRA--KQPYNVSVAAEVAACA  324 (422)
Q Consensus       281 ~SK~~~~~G~r~G~i~~~-~~~~-----------------------~----------~l~~~--~~~~~~~~~~~~aa~~  324 (422)
                      ++|.+|.+|.++|++++. .+..                       +          .....  .....+++.....+..
T Consensus       208 ~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r  287 (431)
T PRK08248        208 ATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQ  287 (431)
T ss_pred             CccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhc
Confidence            999999999999987763 2110                       0          00000  1113344444333333


Q ss_pred             HccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594          325 ALQNPIYLE-VKEALIKERERLFKLLKDVPFL  355 (422)
Q Consensus       325 ~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~  355 (422)
                         .-+-+. +.++..++...+.+.|++++.+
T Consensus       288 ---gl~tl~~R~~~~~~nA~~la~~L~~~p~v  316 (431)
T PRK08248        288 ---GLETLHLRMERHSENALAVAKFLEEHEAV  316 (431)
T ss_pred             ---CcCcHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence               223445 7788889999999999988754

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=99.90  E-value=4e-21  Score=189.53  Aligned_cols=318  Identities=15%  Similarity=0.181  Sum_probs=214.2

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~----~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      ..+++.++|+..+.  +.+ ..+|++.+|+.+ +..    +..|..+...+|.++|+++.+  .+.+++++++++|++.+
T Consensus        35 d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sGseA~e~A  112 (406)
T PRK12381         35 DQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATF--ADRVFFCNSGAEANEAA  112 (406)
T ss_pred             eCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccCccCCHHHHHHHHHHHhhCC--CCeEEEcCCcHHHHHHH
Confidence            34577899997752  233 247888888876 321    122333345678899998875  36999999999999999


Q ss_pred             HHHhc--------CCCCEEEEcCCCchhHHHHHHHcCCEEE-E---ecCC----CCCCCCHHHHHHHhhcCCCeEEEEeC
Q 014594          163 MRCVL--------DPGDKIVDCPPTFTMYEFDAAVNGAAVV-K---VPRK----SDFSLNVELIADAVEREKPKCIFLTS  226 (422)
Q Consensus       163 ~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~-~---v~~~----~~~~~d~~~l~~~i~~~~~~~i~l~~  226 (422)
                      ++...        ....+|+...++|++....+...+.... .   .+..    .....|++.+++.+. +++++|++ .
T Consensus       113 lk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~aavii-E  190 (406)
T PRK12381        113 LKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALID-DQTCAVIV-E  190 (406)
T ss_pred             HHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhcc-CCeeEEEE-e
Confidence            99541        1346799999999866544433222110 0   0000    011347899999986 57888887 5


Q ss_pred             CCCccCcCC--CHHHHHHHHc---C-CCeEEEccCCccccCCCchhh--hhhcCCcEEEEccChhhhccccccceeeecC
Q 014594          227 PNNPDGSII--NDEDLLKILE---M-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (422)
Q Consensus       227 p~NPtG~~~--~~e~l~~i~~---~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~  298 (422)
                      |.|++|-++  +.+.+++|.+   . |+++|+||+|.+|...+....  .....++   +.||||.++ +|+|+||++++
T Consensus       191 Pv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pD---i~t~sK~l~-gG~~ig~~~~~  266 (406)
T PRK12381        191 PIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPD---VLTTAKALG-GGFPIGAMLTT  266 (406)
T ss_pred             CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCC---EEEehhhhh-CCCceEEEEEc
Confidence            889998765  5666666554   3 999999999988765443221  1111222   358999998 89999999999


Q ss_pred             HHHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC----CCcccCCCceEEEEEeCC
Q 014594          299 LSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP----FLNPYPSYSNFILCEVTS  371 (422)
Q Consensus       299 ~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~----~~~~~p~~~~f~~~~~~~  371 (422)
                      +++++.+....  ..|+.+++.+.++.++|+.-+ .. .+++++++.+++.+.|+++.    .+...+..|.++++++++
T Consensus       267 ~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~  345 (406)
T PRK12381        267 EKCASVMTVGTHGTTYGGNPLASAVAGKVLELIN-TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNA  345 (406)
T ss_pred             HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecC
Confidence            99998876533  236779999999888775421 12 77788888888888887753    122234567888998864


Q ss_pred             CC--CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          372 GM--DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       372 ~~--~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ..  ....+.+.|+++||.+.+..    ++.+||+++...+.++++++++++
T Consensus       346 ~~~~~~~~~~~~l~~~Gv~v~~~g----~~~lRl~p~~~~t~~~i~~~~~~l  393 (406)
T PRK12381        346 EYAGKAKQISQEAAKAGVMVLIAG----PNVVRFAPALNISEEEITTGLDRF  393 (406)
T ss_pred             chhhHHHHHHHHHHHCCcEEeeCC----CCEEEEeCCccCCHHHHHHHHHHH
Confidence            32  45778888999999998653    479999986422234455555443

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.90  E-value=3.9e-21  Score=186.65  Aligned_cols=274  Identities=14%  Similarity=0.083  Sum_probs=196.1

Q ss_pred             CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecCCC
Q 014594          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKS  201 (422)
Q Consensus       126 y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~  201 (422)
                      +.+|....|+++++++.|.  +++++++|+++|+..++.+++++||+|++++|.|+.....    .+..|+++..++.. 
T Consensus        47 ~gnPt~~~lE~~lA~l~g~--~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~-  123 (377)
T TIGR01324        47 RGTLTHFALQDAMCELEGG--AGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPL-  123 (377)
T ss_pred             CCCccHHHHHHHHHHHhCC--CcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCC-
Confidence            3456678999999999985  5899999999999999999999999999999999765543    34578888777532 


Q ss_pred             CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEcc
Q 014594          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT  280 (422)
Q Consensus       202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S  280 (422)
                          +.+.+++.++ +++|+|++++|+||+|...+.+++.++++. |+++|+|++|.......     ....+.++++.|
T Consensus       124 ----~~e~l~~~i~-~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~-----pl~~gaDivv~S  193 (377)
T TIGR01324       124 ----IGEDIATLIQ-PNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFK-----PLEHGVDISIQA  193 (377)
T ss_pred             ----CHHHHHHhcC-CCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC-----ccccCceEEEec
Confidence                2378888887 789999999999999999999999999987 99999999998533211     113466799999


Q ss_pred             Chhhhccc-cccceeeecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCc
Q 014594          281 FSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLN  356 (422)
Q Consensus       281 ~SK~~~~~-G~r~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~  356 (422)
                      ++|.++.. +...|+++++++.++.+......  ..+++.....+...+   +.+. +.++..++...+.+.|++.+.+.
T Consensus       194 ~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl---~tl~~R~~~~~~~a~~la~~L~~~p~v~  270 (377)
T TIGR01324       194 GTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGL---RTLGVRLKQHQESSLAIAKWLSEQPEVA  270 (377)
T ss_pred             CceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHHHHhCCCcC
Confidence            99988633 36789999998888777644333  345665544444444   3445 77788888888999998876442


Q ss_pred             -c-cC----------------CCceEEEEEeCC-C-CCHHHHHHHHHhCCcEEEeCCCC-------------------CC
Q 014594          357 -P-YP----------------SYSNFILCEVTS-G-MDAKKLKDDLAKMGVMIRHYNNK-------------------EL  397 (422)
Q Consensus       357 -~-~p----------------~~~~f~~~~~~~-~-~~~~~~~~~L~~~gI~v~~~~~~-------------------~~  397 (422)
                       + +|                ..+..+.+++.+ + ....+|.+.|.-.++.+.-|+..                   ..
T Consensus       271 ~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~  350 (377)
T TIGR01324       271 RVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLFGLGYSWGGYESLALCNQPELGHRPNIKRNLE  350 (377)
T ss_pred             EEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEeccCCCccceeecCCCCCCHHHHHhccCC
Confidence             1 23                124456677752 1 23456667776445554333220                   12


Q ss_pred             CCeEEEEecChhhHHHHHH
Q 014594          398 KGYVRVSVGKPEHTDALME  416 (422)
Q Consensus       398 ~~~iRis~~~~~~~~~l~~  416 (422)
                      ++.||+|++.++ .|+|.+
T Consensus       351 ~~liR~svGlE~-~~dl~~  368 (377)
T TIGR01324       351 GPLIRVHIGLEN-VDDLKA  368 (377)
T ss_pred             CCEEEEEeCCCC-HHHHHH
Confidence            368999999754 344433

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.89  E-value=1.2e-20  Score=184.95  Aligned_cols=213  Identities=15%  Similarity=0.133  Sum_probs=163.9

Q ss_pred             CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecCCCCC
Q 014594          128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSDF  203 (422)
Q Consensus       128 ~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~  203 (422)
                      ++....|++.++++.|.  +..+.+++++.|+.+++.+++++||+|+++.++|......    ....|+++..++.    
T Consensus        60 nPtv~~lE~~la~leg~--~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~----  133 (432)
T PRK06702         60 NPTLAAFEQKLAELEGG--VGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP----  133 (432)
T ss_pred             CcHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC----
Confidence            56678999999999985  4688899999999999999999999999999999754443    5678999999853    


Q ss_pred             CCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccCh
Q 014594          204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS  282 (422)
Q Consensus       204 ~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~S  282 (422)
                      .+|+++++++++ ++||+|++++|+||++.+.+.+++.++++. |+++|+|++|..    + .....-..+-.|++.|+|
T Consensus       134 ~~d~~~l~~~I~-~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~t----P-~~~~pl~~GADIvv~S~T  207 (432)
T PRK06702        134 NLTADEIVALAN-DKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLAT----P-YLCQAFEHGANIIVHSTT  207 (432)
T ss_pred             CCCHHHHHHhCC-cCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCc----h-hhCChhhcCCCEEEEccc
Confidence            578999999997 799999999999999999999999999987 999999999851    1 111111345569999999


Q ss_pred             h-----hhccccccc-----eeeecC-HHHH---------------------HHHH--Hh-cCCCCCcHHHHHHHHHHcc
Q 014594          283 K-----RAGLAGLRV-----GYGAFP-LSII---------------------EYLW--RA-KQPYNVSVAAEVAACAALQ  327 (422)
Q Consensus       283 K-----~~~~~G~r~-----G~i~~~-~~~~---------------------~~l~--~~-~~~~~~~~~~~~aa~~~L~  327 (422)
                      |     ..+++|.++     +|...+ .+++                     .+..  .. .....++++....+...|+
T Consensus       208 Ky~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~  287 (432)
T PRK06702        208 KYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLE  287 (432)
T ss_pred             cccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccC
Confidence            9     777777776     454432 1111                     1111  11 1224678888777777775


Q ss_pred             CChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594          328 NPIYLE-VKEALIKERERLFKLLKDVPFL  355 (422)
Q Consensus       328 ~~~~~~-~~~~~~~~~~~l~~~L~~~~~~  355 (422)
                      .   ++ +.++..++...+.+.|++++.+
T Consensus       288 T---l~lR~~r~~~Na~~la~~L~~~p~V  313 (432)
T PRK06702        288 T---LHLRMERHSENALAVAKWLADHERI  313 (432)
T ss_pred             c---HHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            4   44 6677789999999999987644

>PLN00144 acetylornithine transaminase

Probab=99.89  E-value=7.9e-21  Score=185.53  Aligned_cols=315  Identities=15%  Similarity=0.130  Sum_probs=209.7

Q ss_pred             CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      ..+++.++|+..+..  .+ ..+|++.+++.+ +...    ..|......+|.+.|++..+  .+.+++++++++|++.+
T Consensus        11 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~f~~sGseA~e~A   88 (382)
T PLN00144         11 DVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNVYHTIPQVELAKRLVASSF--ADRVFFCNSGTEANEAA   88 (382)
T ss_pred             eCCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHhcCC--CCeEEEeCCcHHHHHHH
Confidence            346778999987742  33 357888888876 3211    11233334567777776654  46999999999999999


Q ss_pred             HHHhc---C------C------CCEEEEcCCCchhHHHHHHHcCCE-------------EEEecCCCCCCCCHHHHHHHh
Q 014594          163 MRCVL---D------P------GDKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSDFSLNVELIADAV  214 (422)
Q Consensus       163 ~~~l~---~------~------gd~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~d~~~l~~~i  214 (422)
                      ++...   .      +      ..+|+....+|++....+......             +..+|     ..|++.+++.+
T Consensus        89 lklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~~  163 (382)
T PLN00144         89 IKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVE-----YGNLEAARKLI  163 (382)
T ss_pred             HHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeC-----CCCHHHHHHhc
Confidence            98432   1      0      246899999998665444332211             11121     12789999988


Q ss_pred             hcCCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhh--hhhcCCcEEEEccChhhhcc
Q 014594          215 EREKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGL  287 (422)
Q Consensus       215 ~~~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~~  287 (422)
                      ...++++|+++..+||.|...+    .+++.++|+. |+++|+||+|..|...+....  .....+.   +.||||.++ 
T Consensus       164 ~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD---i~t~sK~l~-  239 (382)
T PLN00144        164 QKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD---IMTLAKPLA-  239 (382)
T ss_pred             CCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC---EEEeccccc-
Confidence            6567889998866899444332    3455555665 999999999998865443222  1222222   668899997 


Q ss_pred             ccccceeeecCHHHHHHHHH--hcCCCCCcHHHHHHHHHH---ccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC
Q 014594          288 AGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAA---LQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY  361 (422)
Q Consensus       288 ~G~r~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~aa~~~---L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~  361 (422)
                      +|+|+||+++++++.+.+..  ....|+.+++.+.++.+.   ++++++.+ .++.-+..++.+.+.+.+.+.+......
T Consensus       240 ~G~pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg~  319 (382)
T PLN00144        240 GGLPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRGV  319 (382)
T ss_pred             CCcceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCCCceeeecC
Confidence            89999999999999988753  233577899999888844   45555544 3333334455555566666544333458


Q ss_pred             ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          362 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       362 ~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      |.++|+++.  .+...+.+.+.++||.+.++..   .+.+|++++...+.+++.+++++|
T Consensus       320 G~~~~l~l~--~~~~~~~~~~~~~Gv~i~~~~~---~~~lrl~p~~~~~~~~i~~~~~~l  374 (382)
T PLN00144        320 GLLVGIQLD--VPAGPLVDACRDSGLLVLTAGK---GDVVRLVPPLVISEAELEQAVEIL  374 (382)
T ss_pred             ceEEEEEec--CccHHHHHHHHHCCeEEeecCC---CCEEEEeCCCccCHHHHHHHHHHH
Confidence            899999983  3567899999999999988632   489999988622245666666554

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=99.89  E-value=3.2e-21  Score=189.69  Aligned_cols=316  Identities=16%  Similarity=0.138  Sum_probs=209.9

Q ss_pred             CCCCCeEEcCCC--CCCC-CCCHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           92 RKPEDIVKIDAN--ENPY-GPPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        92 ~~~~~~i~l~~~--~~~~-~~~~~v~~al~~-~~~----~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      .++++++|+..+  .+.+ ..+|++.+++.+ +..    +..|+.+...+|.++|+++.+.  +.+++++++++|++.++
T Consensus        32 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~~~--~~~~f~~SGseA~e~Al  109 (397)
T TIGR03246        32 QQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNGYTNEPVLRLAKKLVDATFA--DKVFFCNSGAEANEAAL  109 (397)
T ss_pred             CCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHHHHH
Confidence            467889999886  2333 357899888876 322    1233444467899999998763  69999999999999999


Q ss_pred             HHhc-------CCC-CEEEEcCCCchhHHHHH-HHcCCE------------EEEecCCCCCCCCHHHHHHHhhcCCCeEE
Q 014594          164 RCVL-------DPG-DKIVDCPPTFTMYEFDA-AVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPKCI  222 (422)
Q Consensus       164 ~~l~-------~~g-d~Vl~~~p~y~~~~~~~-~~~g~~------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i  222 (422)
                      +...       .+| ++|+..+-.|++....+ ...+..            +..++     ..|++.+++.+. +++++|
T Consensus       110 k~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~-~~~aav  183 (397)
T TIGR03246       110 KLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAP-----YNDLAAAKALIS-DKTCAV  183 (397)
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeC-----CCCHHHHHHHhc-cCeEEE
Confidence            9541       123 56888888787554333 222321            12222     237999999996 678999


Q ss_pred             EEeCCCCccCcCC-CHHHHHHH---HcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeec
Q 014594          223 FLTSPNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (422)
Q Consensus       223 ~l~~p~NPtG~~~-~~e~l~~i---~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~  297 (422)
                      +++.++++.|... +.+.+++|   |+. |+++|+||+|..+...+.... ....+...-+.+++|.++ +|+++|++++
T Consensus       184 i~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a-~~~~gv~pDi~t~~K~lg-gG~pigav~~  261 (397)
T TIGR03246       184 IVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYA-YMHYGVTPDILTSAKALG-GGFPIGAMLT  261 (397)
T ss_pred             EEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchh-hhhcCCCCCEEEeehhhh-CCcceeEEEE
Confidence            9887777777654 65555554   544 999999999987754333211 111111122337899998 8999999999


Q ss_pred             CHHHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCC----CCcccCCCceEEEEEeCC
Q 014594          298 PLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVP----FLNPYPSYSNFILCEVTS  371 (422)
Q Consensus       298 ~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~~~f~~~~~~~  371 (422)
                      ++++++.+....  ..|+.+++.+.++.++|+..+..+..++++++.+++.+.|++++    .+...+..|.++.+.+.+
T Consensus       262 ~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~  341 (397)
T TIGR03246       262 TTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTE  341 (397)
T ss_pred             cHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcC
Confidence            999988875432  23667888888888888643211277788888888888887753    122234456666676643


Q ss_pred             C--CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          372 G--MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       372 ~--~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .  .....+++.|.++||.+.+..    .+++|++++...+.++++++++++
T Consensus       342 ~~~~~~~~~~~~l~~~Gv~~~~~g----~~~lR~~p~~~~t~~~i~~~~~~l  389 (397)
T TIGR03246       342 AYQGKAKQFVNAAAEEGVIALIAG----PNVVRFAPSLVISDDDIDEGLARF  389 (397)
T ss_pred             chhhHHHHHHHHHHHCCeEEeecC----CCEEEEeCCCCCCHHHHHHHHHHH
Confidence            2  246788899999999998753    479999765433335555555544

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>PRK05939 hypothetical protein; Provisional

Probab=99.89  E-value=5.8e-21  Score=186.75  Aligned_cols=240  Identities=18%  Similarity=0.197  Sum_probs=169.0

Q ss_pred             CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHH---HHHHHcCCEEEEecCCCCC
Q 014594          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDF  203 (422)
Q Consensus       127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~  203 (422)
                      .++....|+++++++.|.+  ..+++++++.|+..++.+++++||+|+++.+.|+...   ..++..|++++.++.    
T Consensus        45 g~p~~~~lE~~la~leg~~--~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~----  118 (397)
T PRK05939         45 GTPTTAALEAKITKMEGGV--GTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA----  118 (397)
T ss_pred             CCHHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC----
Confidence            3445679999999999864  3455556689999999999999999999999996433   345568999999874    


Q ss_pred             CCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccCh
Q 014594          204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS  282 (422)
Q Consensus       204 ~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~S  282 (422)
                       .|+++++++++ +++|+|++++|+||||.+.+.+++.++++. |+++|+|++|.....    . .....+.++++.|+|
T Consensus       119 -~d~e~l~~~l~-~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~----~-~~~~~gaDivv~S~s  191 (397)
T PRK05939        119 -TDVQNVAAAIR-PNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWL----F-RPKDVGASLVINSLS  191 (397)
T ss_pred             -CCHHHHHHhCC-CCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccccc----c-CccccCCEEEEecCe
Confidence             37999999997 789999999999999999999999999987 999999999863211    0 111235679999999


Q ss_pred             hhhccccccceeeecCHHH----------------------HHHHHH-hc--CCCCCcHHHHHHHHHHccCChHHH-HHH
Q 014594          283 KRAGLAGLRVGYGAFPLSI----------------------IEYLWR-AK--QPYNVSVAAEVAACAALQNPIYLE-VKE  336 (422)
Q Consensus       283 K~~~~~G~r~G~i~~~~~~----------------------~~~l~~-~~--~~~~~~~~~~~aa~~~L~~~~~~~-~~~  336 (422)
                      |.++..|.++|+++++...                      +..+.. ..  ....+++.....+.   +.-+-+. +.+
T Consensus       192 K~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~---rgl~tl~~R~~  268 (397)
T PRK05939        192 KYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIA---IGAETLALRVD  268 (397)
T ss_pred             ecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHHH---cCcCcHHHHHH
Confidence            9999889999998774211                      111111 11  11234444433332   2224445 777


Q ss_pred             HHHHHHHHHHHHHccCCCCc--ccC----------------CCceEEEEEeCCCCCHHHHHHHH
Q 014594          337 ALIKERERLFKLLKDVPFLN--PYP----------------SYSNFILCEVTSGMDAKKLKDDL  382 (422)
Q Consensus       337 ~~~~~~~~l~~~L~~~~~~~--~~p----------------~~~~f~~~~~~~~~~~~~~~~~L  382 (422)
                      +..++...+.+.|+..+.+.  .+|                ..|..+.+++.++.+...|.+.|
T Consensus       269 ~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~~~~~~f~~~l  332 (397)
T PRK05939        269 RSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADGIDCFDFLNRL  332 (397)
T ss_pred             HHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCHHHHHHHHHhC
Confidence            77889999999999876542  133                23556777885322233444444

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=99.89  E-value=6.5e-21  Score=188.04  Aligned_cols=316  Identities=14%  Similarity=0.095  Sum_probs=212.0

Q ss_pred             CCCCCeEEcCCCCCCCC---CCHHHHHHHhcC-C-CCCC---CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           92 RKPEDIVKIDANENPYG---PPPEVREALGQL-K-FPYI---YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        92 ~~~~~~i~l~~~~~~~~---~~~~v~~al~~~-~-~~~~---y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      ..+++++|+.++.....   .+|++.+++.+. . ..+.   +..+...++.++++++++.  +.++++++|++|++.++
T Consensus        34 ~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~SGs~A~e~ai  111 (401)
T TIGR01885        34 VEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLFGY--DKVLPMNTGAEAVETAI  111 (401)
T ss_pred             CCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhcCC--CEEEEeCccHHHHHHHH
Confidence            35677899988754433   478999888752 2 2111   2233467899999999874  68999999999999999


Q ss_pred             HHhc---------CC-CCEEEEcCCCchhH-HHHHHHcCC------------EEEEecCCCCCCCCHHHHHHHhhc--CC
Q 014594          164 RCVL---------DP-GDKIVDCPPTFTMY-EFDAAVNGA------------AVVKVPRKSDFSLNVELIADAVER--EK  218 (422)
Q Consensus       164 ~~l~---------~~-gd~Vl~~~p~y~~~-~~~~~~~g~------------~~~~v~~~~~~~~d~~~l~~~i~~--~~  218 (422)
                      +...         .+ .+.|+....+|+.. .......|.            .++.++     ..|++.+++.+++  ++
T Consensus       112 ~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~le~~l~~~~~~  186 (401)
T TIGR01885       112 KLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIP-----YNNLEALEEALEDHGPN  186 (401)
T ss_pred             HHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeC-----CCCHHHHHHHHHhcCCC
Confidence            9642         12 36688888888743 222222221            123332     1278999988853  45


Q ss_pred             CeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhh--hhhcCCcEEEEccChhhhcccccc
Q 014594          219 PKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLR  291 (422)
Q Consensus       219 ~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~~~G~r  291 (422)
                      ..+|+++.+++++|...+    .+++.++++. |+++|+||+|..|...+....  .....++++   +++|.++.+|+|
T Consensus       187 ~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~---~~gK~l~~g~~~  263 (401)
T TIGR01885       187 VCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIV---LLGKALSGGVYP  263 (401)
T ss_pred             EEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEE---EeeccccCCCCC
Confidence            678888899999999998    6677777776 999999999987754333221  111123333   467999866699


Q ss_pred             ceeeecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCC--cccCCCceEEEE
Q 014594          292 VGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFL--NPYPSYSNFILC  367 (422)
Q Consensus       292 ~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~--~~~p~~~~f~~~  367 (422)
                      +|++++++++++.+.....  .++.+++.+.++.++|+..+.....++.++..+++.+.|++++..  ...+..|.+..+
T Consensus       264 ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~~l~~~~~~~~~~~~~~L~~l~~~~~~~~~g~g~~~~i  343 (401)
T TIGR01885       264 VSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEEKLAENAEKLGEIFRDQLKKLPKPIITEVRGRGLLNAI  343 (401)
T ss_pred             cEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhccCCceeEEeecCeeEEE
Confidence            9999999999887754222  466788889888888864221125567777789999999887421  223345666666


Q ss_pred             EeCCC---CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          368 EVTSG---MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       368 ~~~~~---~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .++..   .+..++.+.|.++||.+.+..    ++.+||++....+.+++.+++++|
T Consensus       344 ~~~~~~~~~~~~~l~~~l~~~Gv~v~~~~----~~~lRi~p~l~~t~~~i~~~l~~l  396 (401)
T TIGR01885       344 VIDESKTGRTAWDLCLKLKEKGLLAKPTH----GNIIRLAPPLVITEEQLDEGLEII  396 (401)
T ss_pred             EeccCcchhHHHHHHHHHHhCCEEEEecC----CCEEEEeCCccCCHHHHHHHHHHH
Confidence            66433   256789999999999998754    579999975322234455444443

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>PRK07671 cystathionine beta-lyase; Provisional

Probab=99.89  E-value=7.9e-21  Score=184.96  Aligned_cols=215  Identities=17%  Similarity=0.186  Sum_probs=160.1

Q ss_pred             CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch-hHHH---HHHHcCCEEEEecC
Q 014594          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT-MYEF---DAAVNGAAVVKVPR  199 (422)
Q Consensus       124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~-~~~~---~~~~~g~~~~~v~~  199 (422)
                      .+|+++....|++.++++.|.+ ..+++++| +.++..++. ++++||+|+++.|.|. .|..   .+...|++++.++.
T Consensus        45 ~r~~~p~~~~Le~~lA~l~g~~-~~~~~~sG-~aai~~~~~-~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~  121 (377)
T PRK07671         45 SRTGNPTRAALEELIAVLEGGH-AGFAFGSG-MAAITAVMM-LFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT  121 (377)
T ss_pred             CCCCChHHHHHHHHHHHHhCCC-ceEEeCCH-HHHHHHHHH-HhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC
Confidence            4567777899999999999964 35555555 568877664 7899999999999997 4443   33457999998873


Q ss_pred             CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (422)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~  278 (422)
                           .|+++++++++ +++|+|++++|+||||.+.+.+++.++++. |+++|+|++|....... ..    ..+.++++
T Consensus       122 -----~d~~~l~~ai~-~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~-p~----~~g~Divv  190 (377)
T PRK07671        122 -----SNLEEVEEAIR-PNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQS-PI----SLGADIVL  190 (377)
T ss_pred             -----CCHHHHHHhcC-CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCC-hh----hhCCeEEE
Confidence                 38999999997 689999999999999999999999999987 99999999997533221 11    23446999


Q ss_pred             ccChhhhcccc-ccceeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594          279 RTFSKRAGLAG-LRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP  353 (422)
Q Consensus       279 ~S~SK~~~~~G-~r~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~  353 (422)
                      .|+||.++.++ .-.|++++ ++++++++...+..  ...++.....+.   .....+. +.++..++...+.+.|++.+
T Consensus       191 ~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~---~~l~tl~~R~~~~~~na~~la~~L~~~~  267 (377)
T PRK07671        191 HSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLL---RGLKTLGIRMEEHETNSRAIAEFLNNHP  267 (377)
T ss_pred             ecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHH---cCcChHHHHHHHHHHHHHHHHHHHHcCC
Confidence            99999887443 23566665 56788877765554  334554444333   3334455 78888899999999999876


Q ss_pred             CC
Q 014594          354 FL  355 (422)
Q Consensus       354 ~~  355 (422)
                      .+
T Consensus       268 ~v  269 (377)
T PRK07671        268 AV  269 (377)
T ss_pred             Ce
Confidence            44

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=99.89  E-value=5e-20  Score=179.73  Aligned_cols=307  Identities=12%  Similarity=0.059  Sum_probs=196.5

Q ss_pred             CCeEEcCCCC-CCCCCCHHHHHHHh----cCC-C-----CCCCC------Cc-chHHHHHHHHHHcCCCCCCEEEeCCHH
Q 014594           95 EDIVKIDANE-NPYGPPPEVREALG----QLK-F-----PYIYP------DP-ESRRLRAALAKDSGLESDHILVGCGAD  156 (422)
Q Consensus        95 ~~~i~l~~~~-~~~~~~~~v~~al~----~~~-~-----~~~y~------~~-~~~~lr~~la~~~~~~~~~i~~~~G~~  156 (422)
                      .++++|.+|+ -.+..+|.+.+++.    +.. .     .+...      .. -..++|+.++++++.+ +.+++++|++
T Consensus         4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~-~~l~~~sG~~   82 (370)
T PRK05937          4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAP-EAFIVPSGYM   82 (370)
T ss_pred             CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-eEEEECChHH
Confidence            4568887764 34555555554443    321 0     11111      11 2678999999999974 4477777775


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeEEEEeCCCCcc
Q 014594          157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPD  231 (422)
Q Consensus       157 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPt  231 (422)
                      . +..+...+.++||.|++..-.|.......+......+.++     ..|++.+++.+++     .++++|++++++|++
T Consensus        83 a-~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~  156 (370)
T PRK05937         83 A-NLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFR-----HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFK  156 (370)
T ss_pred             H-HHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEec-----CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCC
Confidence            4 4455555667888888777777666555555443444443     4689999998863     235577788999999


Q ss_pred             CcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchh---hhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHH
Q 014594          232 GSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRM---EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR  307 (422)
Q Consensus       232 G~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~---~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~  307 (422)
                      |.+.|.+++.++++. |+++++||+|.....+....   ......+..+.+.||||.+|..|   +.++..++..+.+..
T Consensus       157 G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G---~~vl~~~~~~~~~~~  233 (370)
T PRK05937        157 GTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG---AALLSSSEVKQDLML  233 (370)
T ss_pred             CCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc---eEEEcCHHHHHHHHH
Confidence            999999999999987 99999999998643222111   11111222367899999998767   334556766665553


Q ss_pred             hcCC----CCCcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHH
Q 014594          308 AKQP----YNVSVAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD  380 (422)
Q Consensus       308 ~~~~----~~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~  380 (422)
                      ...+    .+.+++...++.++++   +.. ...++++++.++++.+.|...+.       +....+.++ +.+.+.+.+
T Consensus       234 ~~~~~~~s~~~~~~~~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~~-------~~~~~i~~~-~~~~~~~~~  304 (370)
T PRK05937        234 NSPPLRYSTGLPPHLLISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSAAP-------GCVQPIFLP-GISEQELYS  304 (370)
T ss_pred             hCCCCeecCCCCHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCCCC-------CCEEEEEeC-ChhHHHHHH
Confidence            3333    2455666555555553   221 12667788888888888764321       112234454 345678888


Q ss_pred             HHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          381 DLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       381 ~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      .|.++||.+..... ...+++|||+.   +.+|++++.++|+.+
T Consensus       305 ~L~~~gi~v~~~~~-~~~~~iRis~~~~~t~edid~l~~~L~~~  347 (370)
T PRK05937        305 KLVETGIRVGVVCF-PTGPFLRVNLHAFNTEDEVDILVSVLATY  347 (370)
T ss_pred             HHHHCCeeEEeeCC-CCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Confidence            99999999875432 23568999994   677788888877653

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=99.88  E-value=1.4e-20  Score=186.26  Aligned_cols=327  Identities=14%  Similarity=0.062  Sum_probs=205.6

Q ss_pred             CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC--CC---CCCcchHHHHHHHHHHcCC-CCCCEEEeCCHHHHHH
Q 014594           91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP--YI---YPDPESRRLRAALAKDSGL-ESDHILVGCGADELID  160 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~--~~---y~~~~~~~lr~~la~~~~~-~~~~i~~~~G~~~al~  160 (422)
                      ..+++.++|+..+..  .+ ..+|++.+++.+ +...  ..   ++.+...++.+.|++.... ..+.+++++++++|++
T Consensus        29 D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e  108 (420)
T TIGR00700        29 DVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVE  108 (420)
T ss_pred             eCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHH
Confidence            346788999988742  22 357888888876 3211  11   2333355777777777642 2368999999999999


Q ss_pred             HHHHHhc--CCCCEEEEcCCCchhHHHHHHHc-CC-------------EEEEecCCCCCC-----------CCHHHHHHH
Q 014594          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAVN-GA-------------AVVKVPRKSDFS-----------LNVELIADA  213 (422)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~~-----------~d~~~l~~~  213 (422)
                      .+++.-.  ....+|+....+|++....+... |-             .+..++....+.           -+++.+++.
T Consensus       109 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (420)
T TIGR00700       109 NAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAI  188 (420)
T ss_pred             HHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHH
Confidence            9998432  22357888888897654433321 11             122232211100           124566666


Q ss_pred             hh----cCCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhh
Q 014594          214 VE----REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR  284 (422)
Q Consensus       214 i~----~~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~  284 (422)
                      +.    .+++.+|++.....-+|.+++    .+++.++|+. |+++|+||+|.+|...+.... ....+....+.+|||.
T Consensus       189 ~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a-~~~~~~~pDi~~lsK~  267 (420)
T TIGR00700       189 FVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFA-CEHEGPEPDLITTAKS  267 (420)
T ss_pred             HHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHH-HhhcCCCCCEEEeecc
Confidence            52    256788988877777898887    4455556665 999999999999865443211 1122222234468999


Q ss_pred             hccccccceeeecCHHHHHHHHH--hcCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCccc
Q 014594          285 AGLAGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPY  358 (422)
Q Consensus       285 ~~~~G~r~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~  358 (422)
                      ++ +|+|+||+++++++++.+..  ....++.+++++.++.++|+   ++.+.+ ..+.-+..++.+.+..+.++.+...
T Consensus       268 l~-~G~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v  346 (420)
T TIGR00700       268 LA-DGLPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDV  346 (420)
T ss_pred             cc-CCcceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEe
Confidence            98 99999999999999887753  23457889999999977764   334444 3333333344444433445544334


Q ss_pred             CCCceEEEEEeCCC-------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          359 PSYSNFILCEVTSG-------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       359 p~~~~f~~~~~~~~-------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ...|.++++++.+.       .....+.+.+.++||.+.++..+  ++++||+++...+.++|.++++++
T Consensus       347 rg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f--~~~lRl~p~l~~~~~~l~~~~~~l  414 (420)
T TIGR00700       347 RGLGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMF--GNIIRFLPPLTIGDELLSEGLDIL  414 (420)
T ss_pred             eccceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCC--CCEEEEECCCCcCHHHHHHHHHHH
Confidence            45688888877321       11355667777999999987543  379999986422346677776655

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.88  E-value=1.1e-20  Score=186.18  Aligned_cols=215  Identities=17%  Similarity=0.157  Sum_probs=156.8

Q ss_pred             CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH----HcCCEEEEecCC
Q 014594          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRK  200 (422)
Q Consensus       125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~  200 (422)
                      +++++...+|+++++++.|.  +..++++++++++..++.+++++||+|+++.+.|........    ..|+++..++. 
T Consensus        54 r~~~pt~~~Le~~lA~l~g~--~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~-  130 (425)
T PRK06084         54 RIMNPTNDVLEQRVAALEGG--VGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH-  130 (425)
T ss_pred             CCCCchHHHHHHHHHHHhCC--CceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC-
Confidence            34667778999999999984  356677888899999999999999999999999974333332    25667666652 


Q ss_pred             CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (422)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~  279 (422)
                          .|+++++++++ +++++|++++|+||||.+++.+++.++++. |+++|+|++|...... ...    ..+.++++.
T Consensus       131 ----~d~e~le~ai~-~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~-~p~----~~gaDivv~  200 (425)
T PRK06084        131 ----DDIAALEALID-ERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLC-RPF----EHGADIVVH  200 (425)
T ss_pred             ----CCHHHHHHHhc-cCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-Chh----hcCCCEEEE
Confidence                48999999997 689999999999999999999999999987 9999999999843321 111    234569999


Q ss_pred             cChhhhccccccceeeecC-HHH--HH---HH----------------------------H---HhcCCCCCcHHHHHHH
Q 014594          280 TFSKRAGLAGLRVGYGAFP-LSI--IE---YL----------------------------W---RAKQPYNVSVAAEVAA  322 (422)
Q Consensus       280 S~SK~~~~~G~r~G~i~~~-~~~--~~---~l----------------------------~---~~~~~~~~~~~~~~aa  322 (422)
                      |++|.++.+|.++|.+++. ..+  .+   ..                            .   .......+++.....+
T Consensus       201 S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~  280 (425)
T PRK06084        201 SLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLI  280 (425)
T ss_pred             CchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence            9999998888888877763 221  00   00                            0   0011123444443333


Q ss_pred             HHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594          323 CAALQNPIYLE-VKEALIKERERLFKLLKDVPFL  355 (422)
Q Consensus       323 ~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~  355 (422)
                      ..-|   +-+. +.++..++...+.+.|++++.+
T Consensus       281 lrgl---~tl~~R~~~~~~na~~la~~L~~~p~v  311 (425)
T PRK06084        281 LQGL---ETLALRMERHTENALKVARYLQQHPQV  311 (425)
T ss_pred             HcCc---CcHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            3333   3344 7778889999999999987654

>PLN02624 ornithine-delta-aminotransferase

Probab=99.88  E-value=1.7e-20  Score=187.80  Aligned_cols=317  Identities=15%  Similarity=0.144  Sum_probs=205.7

Q ss_pred             CCCCCCeEEcCCCCCCC---CCCHHHHHHHhc-CC---CC-CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           91 GRKPEDIVKIDANENPY---GPPPEVREALGQ-LK---FP-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~~~---~~~~~v~~al~~-~~---~~-~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      +.+++.++|+..+....   ..+|++.+++.+ +.   .. ..+..+...+|.+.++++++.  +.++++++++++++.+
T Consensus        71 d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~~~--~~~~f~~SGseA~e~A  148 (474)
T PLN02624         71 DPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMFGY--DMVLPMNTGAEGVETA  148 (474)
T ss_pred             ECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhcCC--CeEEEeCChHHHHHHH
Confidence            45678899998875433   247999988875 22   11 223445567899999999863  6899999999999999


Q ss_pred             HHHhcC---------CC-CEEEEcCCCchhHHHHHHHcCCE-------------EEEecCCCCCCCCHHHHHHHhhc--C
Q 014594          163 MRCVLD---------PG-DKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSDFSLNVELIADAVER--E  217 (422)
Q Consensus       163 ~~~l~~---------~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~d~~~l~~~i~~--~  217 (422)
                      ++....         ++ ..|+....+|++....+......             +..++.     -|++.+++.++.  .
T Consensus       149 lklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~  223 (474)
T PLN02624        149 IKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-----GDLDALEKIFEEDGD  223 (474)
T ss_pred             HHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-----CCHHHHHHHHHhCCC
Confidence            984321         12 25777878887554333221111             112221     278899988853  4


Q ss_pred             CCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhhh--hhcCCcEEEEccChhhhccccc
Q 014594          218 KPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKRAGLAGL  290 (422)
Q Consensus       218 ~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~  290 (422)
                      ++++|+++.++|++|.+++    .+++.++|+. |+++|+||+|..|...+.....  .+..++++   +++|.+|.+++
T Consensus       224 ~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv---~lsK~lggG~~  300 (474)
T PLN02624        224 RIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVV---ILGKALGGGVI  300 (474)
T ss_pred             CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCEE---EecccccCCCC
Confidence            6789999999999999998    6667777766 9999999999977544432221  11222323   36899997669


Q ss_pred             cceeeecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCC-CcccCCCce
Q 014594          291 RVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPF-LNPYPSYSN  363 (422)
Q Consensus       291 r~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~-~~~~p~~~~  363 (422)
                      ++|++++++++++.+....  ..++.+++.+.++.++|+..+..+..++..++.+++.+.|++    ++. +......|.
T Consensus       301 pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~  380 (474)
T PLN02624        301 PVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDEKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGL  380 (474)
T ss_pred             cceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEE
Confidence            9999999998888765333  335678899988888885321111344444555555555544    231 221234566


Q ss_pred             EEEEEeCCC----CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          364 FILCEVTSG----MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       364 f~~~~~~~~----~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ++.+.+...    ..+.++++.|.++||.+.++.    ++++||++....+.+++++++++|
T Consensus       381 ~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p~~----~~~lR~~p~l~~t~e~id~~l~~L  438 (474)
T PLN02624        381 LNAVVLNSPKLGPVSAYDVCLKLKERGLLAKPTH----DTIIRLAPPLSISEDELQECSKAL  438 (474)
T ss_pred             EEEEEecCCCcChHHHHHHHHHHHhCCeEEecCC----CCEEEEECCccCCHHHHHHHHHHH
Confidence            666666421    235678888999999998764    588999974322234455555443

>TIGR01814 kynureninase kynureninase

Probab=99.88  E-value=2.8e-20  Score=183.85  Aligned_cols=312  Identities=16%  Similarity=0.093  Sum_probs=207.4

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-C---C----CCCCC-Cc--chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-K---F----PYIYP-DP--ESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~---~----~~~y~-~~--~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      .+.+.|+.+... +.|+.+.+++.+. .   .    .+... ..  ...+.++++ +++|+++++|++++|++++++.++
T Consensus        26 ~~~iyld~~a~g-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~~~~~v~~~~~~t~~l~~~~  103 (406)
T TIGR01814        26 NAVIYLDGNSLG-LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLKL-RLVGAKEDEVVVMNTLTINLHLLL  103 (406)
T ss_pred             CCcEEecCCCcC-cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhccc-cccCCCCCcEEEeCCchHHHHHHH
Confidence            457999976644 3477777777542 1   0    11111 11  122333335 789999999999999999999999


Q ss_pred             HHhcCCC---CEEEEcCCCchhH----HHHHHHcCCEE----EEecCCCCCCCCHHHHHHHhh--cCCCeEEEEeCCCCc
Q 014594          164 RCVLDPG---DKIVDCPPTFTMY----EFDAAVNGAAV----VKVPRKSDFSLNVELIADAVE--REKPKCIFLTSPNNP  230 (422)
Q Consensus       164 ~~l~~~g---d~Vl~~~p~y~~~----~~~~~~~g~~~----~~v~~~~~~~~d~~~l~~~i~--~~~~~~i~l~~p~NP  230 (422)
                      ..+++++   +.|++....|+..    ...++..|+++    +.++.++++.+|++.+++.+.  .+++++|++++++|.
T Consensus       104 ~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~  183 (406)
T TIGR01814       104 ASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNGDDIAVILLSGVQYY  183 (406)
T ss_pred             HHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEeccccc
Confidence            9887664   3688888889752    22345678887    466655556789999988874  267999999999999


Q ss_pred             cCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhh-ccccccceeeecCHHHHHHHHHh
Q 014594          231 DGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRA  308 (422)
Q Consensus       231 tG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~r~G~i~~~~~~~~~l~~~  308 (422)
                      ||.+.|.+++.++++. |+++++|++++....    .-.+...+.++++.|..|.+ |.+|   |.++..++....+...
T Consensus       184 tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~----~id~~~~gvD~~~~s~hK~l~g~pG---~~l~v~~~~~~~~~p~  256 (406)
T TIGR01814       184 TGQLFDMAAITRAAHAKGALVGFDLAHAVGNV----PLDLHDWGVDFACWCTYKYLNAGPG---AGAFVHEKHAHTERPR  256 (406)
T ss_pred             cceecCHHHHHHHHHHcCCEEEEEcccccCCc----ccccccCCCCEEEEcCccccCCCCC---eEEEEehhhhhhcCCC
Confidence            9999999999999997 999999999985322    11122345568899999965 3344   4344333323222110


Q ss_pred             c-------------------------CCCCCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCC----CCc
Q 014594          309 K-------------------------QPYNVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVP----FLN  356 (422)
Q Consensus       309 ~-------------------------~~~~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~----~~~  356 (422)
                      .                         ...+++.....++.++|+.-  ...+ ++++.++..+++.+.|+++.    .+.
T Consensus       257 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~  336 (406)
T TIGR01814       257 LAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLT  336 (406)
T ss_pred             CCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceE
Confidence            0                         01335555655555555431  1234 77888899999999887642    233


Q ss_pred             cc-CC----CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec----ChhhHHHHHHHHhhh
Q 014594          357 PY-PS----YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG----KPEHTDALMECLMHL  421 (422)
Q Consensus       357 ~~-p~----~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~----~~~~~~~l~~al~~l  421 (422)
                      +. |.    .+..+.+.++  .+.+++.+.|.++||.+....    ++.||||++    +.++++++.++++.+
T Consensus       337 i~~~~~~~~r~~~v~~~~~--~~~~~~~~~L~~~gi~v~~~~----~~~iRiS~~~~~nt~~did~l~~~l~~~  404 (406)
T TIGR01814       337 IITPRDHAQRGCQLSLTHP--VPGKAVFQALIKRGVIGDKRE----PSVIRVAPVPLYNTFVDVYDAVNVLEEI  404 (406)
T ss_pred             EeCCCChhhcCCeEEEEec--CCHHHHHHHHHHCCEEEeccC----CCeEEEechhccCCHHHHHHHHHHHHHH
Confidence            22 21    2346667776  467889999999999886432    469999983    456677777777653

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=99.88  E-value=4.5e-20  Score=185.19  Aligned_cols=315  Identities=18%  Similarity=0.188  Sum_probs=211.9

Q ss_pred             cCCCCCCCCCCHHHHHHHhcC-CC--CCCC-CC---cch----HHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH--HH-H
Q 014594          100 IDANENPYGPPPEVREALGQL-KF--PYIY-PD---PES----RRLRAALAKDSGLESDHILVGCGADELIDLI--MR-C  165 (422)
Q Consensus       100 l~~~~~~~~~~~~v~~al~~~-~~--~~~y-~~---~~~----~~lr~~la~~~~~~~~~i~~~~G~~~al~~~--~~-~  165 (422)
                      ++.|+..+..+|.+.+++.+. ..  -+.| |.   .|.    .++++.+++++|++...+..++|+++.+..+  ++ .
T Consensus        73 ~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~  152 (481)
T PRK04366         73 YPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAY  152 (481)
T ss_pred             ecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHH
Confidence            556666777788888888763 11  1345 22   133    3566777777898755666667776665533  33 3


Q ss_pred             hcCCCC----EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC-CCHHHH
Q 014594          166 VLDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI-INDEDL  240 (422)
Q Consensus       166 l~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~-~~~e~l  240 (422)
                      +.++||    +|+++.|.|+.+...++..|++++.++.+.++.+|++++++.+. +++++|++++|| |||.+ .+.+++
T Consensus       153 ~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~-~~t~~V~v~~Pn-~tG~~~~dl~eI  230 (481)
T PRK04366        153 HEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVG-EDTAALMLTNPN-TLGLFERNILEI  230 (481)
T ss_pred             hhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhhcc-cCCeEEEEeCCC-CccccchHHHHH
Confidence            466776    99999999999999999999999999987778999999999997 689999999998 99976 467888


Q ss_pred             HHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccc----cccceeeecCHHHHHHHHHh-------
Q 014594          241 LKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIEYLWRA-------  308 (422)
Q Consensus       241 ~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----G~r~G~i~~~~~~~~~l~~~-------  308 (422)
                      .++++. |+++++|+++.....+.  . .....+.++++++.+|.++.|    |-.+|++.+++++.+++.-.       
T Consensus       231 ~~~a~~~gal~iVD~a~~~~~~g~--~-~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~  307 (481)
T PRK04366        231 AEIVHEAGGLLYYDGANLNAILGK--A-RPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGD  307 (481)
T ss_pred             HHHHHHcCCEEEEEecChhhhccc--C-CccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCC
Confidence            888876 99999999985221111  1 122445678999999987643    44578888888777665200       


Q ss_pred             --------------cCCCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceE--EEEEe
Q 014594          309 --------------KQPYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNF--ILCEV  369 (422)
Q Consensus       309 --------------~~~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f--~~~~~  369 (422)
                                    ...++.+.....++..++..  .+.++ +.++..++.+++.+.|+++ +....+ ...+  +.++.
T Consensus       308 ~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~-~~~~~~-~~~~~~~~~~~  385 (481)
T PRK04366        308 RYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI-YDLPYD-RPCMHEFVLSG  385 (481)
T ss_pred             ceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh-CcccCC-CCeeEEEEEEC
Confidence                          00122233444444444443  23344 5677788899999999886 211222 2221  22332


Q ss_pred             C----CCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          370 T----SGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       370 ~----~~~~~~~~~~~L~~~gI~v~~~~~~-~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      +    .+.+..++.+.|.++||.+.....+ ...+++|+++.   +.+++|+|.++++++
T Consensus       386 ~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i  445 (481)
T PRK04366        386 KKLKETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQI  445 (481)
T ss_pred             ccccccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHHH
Confidence            2    1457899999999999987633222 23678999986   456788888887764

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.88  E-value=1.8e-19  Score=176.62  Aligned_cols=299  Identities=15%  Similarity=0.160  Sum_probs=202.9

Q ss_pred             HHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHHH
Q 014594          112 EVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAV  189 (422)
Q Consensus       112 ~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~  189 (422)
                      +..+++.+ +..+..++.+...++|+++++++|.+  +.++++|+++++..++.++ +++||+|+++.|+|..+...+..
T Consensus        11 ~~~~~v~~~~~~~~~~~g~~~~~le~~la~~~g~~--~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~~~~   88 (380)
T TIGR03588        11 DDIDAVVEVLKSDFLTQGPTVPAFEEALAEYVGAK--YAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANCALY   88 (380)
T ss_pred             HHHHHHHHHHhcCCccCChhHHHHHHHHHHHHCCC--eEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHH
Confidence            33455554 22222224456789999999999974  5667778999999999988 78999999999999988888888


Q ss_pred             cCCEEEEecCC-CCCCCCHHHHHHHhhc---CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCC
Q 014594          190 NGAAVVKVPRK-SDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLE  263 (422)
Q Consensus       190 ~g~~~~~v~~~-~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~  263 (422)
                      .|++++.++.+ +++.+|++++++.+++   +++++|++   .|++|...+.+++.++++. |++||+|++|+.+. +++
T Consensus        89 ~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~  165 (380)
T TIGR03588        89 CGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP---VDFAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGG  165 (380)
T ss_pred             cCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE---eCCCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCC
Confidence            99999999974 4678999999999963   57899885   4568999999999999987 99999999998653 222


Q ss_pred             chhhhhhcCCcEEEEccCh--hhhccccccceeeec-CHHHHHHHHHhcCC---------------------------CC
Q 014594          264 SRMEWVKKHDNLIVLRTFS--KRAGLAGLRVGYGAF-PLSIIEYLWRAKQP---------------------------YN  313 (422)
Q Consensus       264 ~~~~~~~~~~~~i~~~S~S--K~~~~~G~r~G~i~~-~~~~~~~l~~~~~~---------------------------~~  313 (422)
                      ...... .. ..+.+.||+  |.++. | ..|+++. ++++.++++.....                           +.
T Consensus       166 ~~~g~~-~~-~d~~~~S~~~~K~~~~-~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~  241 (380)
T TIGR03588       166 KPVGNC-RY-ADATVFSFHPVKIITT-A-EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYR  241 (380)
T ss_pred             EeCCCc-cc-cceEEEecCCCCcccc-c-CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccC
Confidence            222211 01 246777775  76653 3 4677776 56777766543210                           11


Q ss_pred             CcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCccc-CC-C---ceEEE-EEeC--CCCCHHHHHHHHHhC
Q 014594          314 VSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPY-PS-Y---SNFIL-CEVT--SGMDAKKLKDDLAKM  385 (422)
Q Consensus       314 ~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~-~---~~f~~-~~~~--~~~~~~~~~~~L~~~  385 (422)
                      ++.+....+...|+.  +.+..++.+++.+++.+.|.+++.+.+. +. .   ..+++ +.++  .+.+.+++.+.|.++
T Consensus       242 m~~l~aa~g~~qL~~--l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~  319 (380)
T TIGR03588       242 MTDIQAALGLSQLKK--LDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAA  319 (380)
T ss_pred             ccHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHC
Confidence            222333333333432  2226667788888899999888755432 21 1   22332 3443  245789999999999


Q ss_pred             CcEEEeCCCC--------------CC-------CCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          386 GVMIRHYNNK--------------EL-------KGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       386 gI~v~~~~~~--------------~~-------~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      ||.++.+..+              ..       ...+++.+.   +.++++.+.++++++
T Consensus       320 gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~  379 (380)
T TIGR03588       320 GIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKV  379 (380)
T ss_pred             CCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHh
Confidence            9998743211              01       145777654   466778888877754

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>PLN02509 cystathionine beta-lyase

Probab=99.87  E-value=4.3e-20  Score=182.56  Aligned_cols=211  Identities=16%  Similarity=0.178  Sum_probs=156.2

Q ss_pred             CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEecCCCCC
Q 014594          128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDF  203 (422)
Q Consensus       128 ~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~  203 (422)
                      ++....|+++++++.+  .++.++++|+++++.+++. ++++||+|+++.|.|..+..    .....|++++.++.    
T Consensus       132 npt~~aLE~~lA~leg--~e~ai~~~SG~aAi~~il~-ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~----  204 (464)
T PLN02509        132 NPTRDALESLLAKLDK--ADRAFCFTSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT----  204 (464)
T ss_pred             CHHHHHHHHHHHHHhC--CCEEEEeCcHHHHHHHHHH-HhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCC----
Confidence            3446788889999887  3567777888899977664 78999999999999987753    34568999988863    


Q ss_pred             CCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccCh
Q 014594          204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS  282 (422)
Q Consensus       204 ~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~S  282 (422)
                       .|++++++++. +++|+|++++|+||+|.+.+.+++.++++. |+++|+|++|...... ...    ..+.++++.|++
T Consensus       205 -~d~e~l~~ai~-~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~-~pl----~~gaDivv~S~t  277 (464)
T PLN02509        205 -TNLDEVAAAIG-PQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLS-RPL----ELGADIVMHSAT  277 (464)
T ss_pred             -CCHHHHHHhCC-cCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccC-Chh----hcCCcEEEecCc
Confidence             47899999996 789999999999999999999999999987 9999999998643321 111    234568999999


Q ss_pred             hhhcccc-ccceeeecC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594          283 KRAGLAG-LRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFL  355 (422)
Q Consensus       283 K~~~~~G-~r~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~  355 (422)
                      |.++.+| .-.|+++++ +.+.+.+...+..  ..+++.....+...|   +.+. +.++..++.+++.+.|++++.+
T Consensus       278 K~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L---~tL~~R~~r~~~nA~~la~~L~~~p~V  352 (464)
T PLN02509        278 KFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGI---KTMALRIEKQQENARKIAMYLSSHPRV  352 (464)
T ss_pred             ccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence            9876433 335777764 4455554433222  234555544444433   4456 8888999999999999988755

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=99.87  E-value=9e-20  Score=177.63  Aligned_cols=215  Identities=14%  Similarity=0.115  Sum_probs=156.1

Q ss_pred             CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhH----HHHHHHcCCEEEEecC
Q 014594          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPR  199 (422)
Q Consensus       124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~  199 (422)
                      .+|+++....|+++++++.|.+ ..+++ ++++.++..++. ++++||+|+++.|.|+..    ...+...|++++.++.
T Consensus        45 ~r~~~p~~~~Le~~la~l~g~~-~al~~-~SG~~Al~~~l~-~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~  121 (380)
T PRK06176         45 SRSGNPTRFALEELIADLEGGV-KGFAF-ASGLAGIHAVFS-LFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT  121 (380)
T ss_pred             cCCCChhHHHHHHHHHHHhCCC-CEEEE-CCHHHHHHHHHH-HcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence            4456777889999999999953 34544 555678887775 789999999999999643    3345568989888863


Q ss_pred             CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (422)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~  278 (422)
                           .|+++++++++ +++++|++++|+||||.+.+.+++.++++. |+++|+|++|....... ..    ..+.++++
T Consensus       122 -----~d~e~l~~ai~-~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~-p~----~~gaDivv  190 (380)
T PRK06176        122 -----SDLSQIKKAIK-PNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQN-PL----LLGADIVV  190 (380)
T ss_pred             -----CCHHHHHHhcC-cCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCC-cc----ccCCCEEE
Confidence                 37999999997 689999999999999999999999999997 99999999998543221 11    23445899


Q ss_pred             ccChhhhcccc-ccceeeecC-HHHHHHHHHhcCCC--CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594          279 RTFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQPY--NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP  353 (422)
Q Consensus       279 ~S~SK~~~~~G-~r~G~i~~~-~~~~~~l~~~~~~~--~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~  353 (422)
                      .|++|.++.+| .-.|+++++ +++.+++...+...  ..++.....+...+   ..+. +.++..++...+.+.|++.+
T Consensus       191 ~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl---~tl~~R~~~~~~~a~~la~~L~~~p  267 (380)
T PRK06176        191 HSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGI---KTLGLRMEAHQKNALCVAEFLEKHP  267 (380)
T ss_pred             ecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHhcc---CcHHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999887555 346777774 56666665544432  23444433333222   3344 66677778888888888765


Q ss_pred             CC
Q 014594          354 FL  355 (422)
Q Consensus       354 ~~  355 (422)
                      .+
T Consensus       268 ~v  269 (380)
T PRK06176        268 KV  269 (380)
T ss_pred             Ce
Confidence            43

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=99.86  E-value=1.1e-19  Score=179.66  Aligned_cols=325  Identities=14%  Similarity=0.145  Sum_probs=203.8

Q ss_pred             CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC--CC---CCCcchHHHHHHHHHHcCC-CCCCEEEeCCHHHHHH
Q 014594           91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP--YI---YPDPESRRLRAALAKDSGL-ESDHILVGCGADELID  160 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~--~~---y~~~~~~~lr~~la~~~~~-~~~~i~~~~G~~~al~  160 (422)
                      +.+++.++|+..+..  .+ ..+|++.+++.+ +...  ..   ++.+...++-+.|++..+. ..+.+++++++++|++
T Consensus        36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e  115 (421)
T PRK09792         36 DVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVE  115 (421)
T ss_pred             eCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHH
Confidence            456788999977642  23 357888888776 3211  11   1233345677777776642 2368999999999999


Q ss_pred             HHHHHhc--CCCCEEEEcCCCchhHHHHHHH-cCC-------------EEEEecCCCC-CCC----CHHHHHHHhh----
Q 014594          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSD-FSL----NVELIADAVE----  215 (422)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~-~~~----d~~~l~~~i~----  215 (422)
                      .+++...  ....+|+....+|++....+.. .|.             .++.+|...+ .++    +++.+++.+.    
T Consensus       116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~  195 (421)
T PRK09792        116 NAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIE  195 (421)
T ss_pred             HHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccC
Confidence            9999542  2235789889888765433222 121             1222332111 112    3477888775    


Q ss_pred             cCCCeEEEEeCCCCccCcCC-CHHHHHHH---HcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChhhhccc
Q 014594          216 REKPKCIFLTSPNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLA  288 (422)
Q Consensus       216 ~~~~~~i~l~~p~NPtG~~~-~~e~l~~i---~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK~~~~~  288 (422)
                      ..++++|+++..++|+|... +.+.+++|   |+. |+++|+||+|.+|...+...  ...+..+.   +.+|+|.++ +
T Consensus       196 ~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pD---i~t~gK~l~-~  271 (421)
T PRK09792        196 AKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPD---LMTMAKSLA-G  271 (421)
T ss_pred             CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCc---EEEeehhhc-C
Confidence            24678999987799999876 75555555   444 99999999999986544322  22222222   568899998 8


Q ss_pred             cccceeeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCc
Q 014594          289 GLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYS  362 (422)
Q Consensus       289 G~r~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~  362 (422)
                      |+|+||+++++++.+.+...  ...|+.++++++++.++++   ++++++ .++.-+..++.+.+..++++.+......|
T Consensus       272 G~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~G  351 (421)
T PRK09792        272 GMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLG  351 (421)
T ss_pred             CCceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhCCCcceecccc
Confidence            99999999999998876532  2357789999996666654   444444 33222222333333223455433333448


Q ss_pred             eEEEEEeCCC-------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          363 NFILCEVTSG-------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       363 ~f~~~~~~~~-------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .++|++++++       .....+.+.+.++||.+.+..  ..++.||+.++...+.+++.++++.+
T Consensus       352 l~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g--~~~~~irl~P~l~i~~~ei~~~~~~l  415 (421)
T PRK09792        352 SMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCG--AYGNVIRFLYPLTIPDAQFDAAMKIL  415 (421)
T ss_pred             eEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeecC--CCCCEEEEeCCCcCCHHHHHHHHHHH
Confidence            9999999743       234677888889999996422  23589999977522234555555443

>PRK05967 cystathionine beta-lyase; Provisional

Probab=99.86  E-value=1.1e-19  Score=176.24  Aligned_cols=212  Identities=12%  Similarity=0.060  Sum_probs=159.4

Q ss_pred             CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEecCCCCC
Q 014594          128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDF  203 (422)
Q Consensus       128 ~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~  203 (422)
                      +|....|++.++.+.+- ++. ++++++++|+..++.+++++||+|+++.|.|+.+..    .++..|+++..++.+   
T Consensus        63 nPt~~~Le~~la~le~~-~~~-v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~---  137 (395)
T PRK05967         63 TPTTDALCKAIDALEGS-AGT-ILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE---  137 (395)
T ss_pred             ChHHHHHHHHHHHHhCC-CCE-EEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC---
Confidence            44456799999988763 334 555557899999999999999999999999987664    456789999888632   


Q ss_pred             CCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccCh
Q 014594          204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS  282 (422)
Q Consensus       204 ~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~S  282 (422)
                        +.+.++++++ +++|+|++++|+||+|.+.+.+++.++++. |+++|+|++|.....- .+    -..+.++++.|.+
T Consensus       138 --~~e~l~~al~-~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~-~p----l~~GaDivv~S~t  209 (395)
T PRK05967        138 --IGAGIAKLMR-PNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYF-RP----LDFGVDISIHAAT  209 (395)
T ss_pred             --CHHHHHHhcC-cCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceec-Ch----hHcCCCEEEEecc
Confidence              3578999997 689999999999999999999999999987 9999999999843211 11    1345669999999


Q ss_pred             hhhcc-ccccceeeecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594          283 KRAGL-AGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFL  355 (422)
Q Consensus       283 K~~~~-~G~r~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~  355 (422)
                      |.++. .+.-.|+++.++++.+++......  ..+++....   .+++.-+-+. +.++..++...+.+.|++++.+
T Consensus       210 Ky~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~~p~da~---l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v  283 (395)
T PRK05967        210 KYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCAGPDDTY---QILRGLRTMGIRLEHHRKSALEIARWLEGRPDV  283 (395)
T ss_pred             cccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCCCHHHHH---HHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            97542 336678888888777766543333  234555533   3333334556 7788889999999999988755

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=99.86  E-value=3.2e-19  Score=176.11  Aligned_cols=317  Identities=16%  Similarity=0.139  Sum_probs=207.6

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcC--C-CCCCC-------CCcchHHHHH----HHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQL--K-FPYIY-------PDPESRRLRA----ALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~--~-~~~~y-------~~~~~~~lr~----~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      +.++|-.++|..  +|.+++++...  . ++.+|       +++...+|++    .+++++|.+ .-++.+++|+.|+..
T Consensus        29 ~~~~l~~sen~~--~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~-~alv~~~SG~~A~~~  105 (416)
T PRK13034         29 DHLELIASENFT--SPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCD-YANVQPHSGSQANGA  105 (416)
T ss_pred             cCeeecccccCC--CHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCC-ceEEecCCcHHHHHH
Confidence            458888888776  78999888763  1 22211       1233567888    999999964 233456788999999


Q ss_pred             HHHHhcCCCCEEEEcCCCchh-HHHHHHH--cCCEE--EEecC-CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594          162 IMRCVLDPGDKIVDCPPTFTM-YEFDAAV--NGAAV--VKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~-~~~~~~~--~g~~~--~~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (422)
                      ++.+++++||+|+++..+|.. +...++.  .+...  +.++. ..++.+|++++++.+...++|+|+++++.  +|...
T Consensus       106 ~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~~  183 (416)
T PRK13034        106 VYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSA--YPREL  183 (416)
T ss_pred             HHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCc--ccccc
Confidence            999999999999999998865 2211111  12222  23332 23467999999999865678988876654  67889


Q ss_pred             CHHHHHHHHcC-CCeEEEccCCccccCC-CchhhhhhcCCcEEEEccChhhhccccccceeeecCHH-HHHHHHHhcCCC
Q 014594          236 NDEDLLKILEM-PILVVLDEAYTEFSGL-ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLWRAKQPY  312 (422)
Q Consensus       236 ~~e~l~~i~~~-~~~li~Deay~~~~~~-~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~-~~~~l~~~~~~~  312 (422)
                      +.+++.++++. |+++|+|++|+..... +.....+  ....+++.|++|.++.+  ..|+++++.+ +.+.+.....+.
T Consensus       184 dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~--~~~Di~~~s~~K~l~g~--~GG~v~~~~~~~~~~~~~~~~~~  259 (416)
T PRK13034        184 DFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPF--PHAHVVTTTTHKTLRGP--RGGMILTNDEEIAKKINSAVFPG  259 (416)
T ss_pred             CHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCC--CCceEEEEeCcccCCCC--CCeEEEECcHHHHHHHHhhcCCc
Confidence            99999999987 9999999998864422 1111111  23568899999987422  2487777654 444444332221


Q ss_pred             ---CCcHHHHHHHH-HHccC--ChHHHHHHHHHHHHHHHHHHHccCCCCcccC-CCceEEEEEeCC-CCCHHHHHHHHHh
Q 014594          313 ---NVSVAAEVAAC-AALQN--PIYLEVKEALIKERERLFKLLKDVPFLNPYP-SYSNFILCEVTS-GMDAKKLKDDLAK  384 (422)
Q Consensus       313 ---~~~~~~~~aa~-~~L~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-~~~~f~~~~~~~-~~~~~~~~~~L~~  384 (422)
                         +..+....++. ++++.  .++.+.++++.++.+++++.|+++|+....+ +.++.+++.+.. +.+...+.+.|.+
T Consensus       260 ~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~  339 (416)
T PRK13034        260 LQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGYDLVSGGTDNHLLLVDLRPKGLSGKDAEQALER  339 (416)
T ss_pred             ccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCCEeccCCCCCcEEEEEcCCCCCCHHHHHHHHHh
Confidence               12222222222 22222  2222367889999999999999886433222 466777787753 4466777788989


Q ss_pred             CCcEEEeC------CCCCCCCeEEEEecC-------hhhHHHHHHHHhhh
Q 014594          385 MGVMIRHY------NNKELKGYVRVSVGK-------PEHTDALMECLMHL  421 (422)
Q Consensus       385 ~gI~v~~~------~~~~~~~~iRis~~~-------~~~~~~l~~al~~l  421 (422)
                      +||.+...      ..+..+..+|+++..       +++++++.++++++
T Consensus       340 ~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~  389 (416)
T PRK13034        340 AGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDV  389 (416)
T ss_pred             CCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHH
Confidence            99999852      113346789999653       67788888877653

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.86  E-value=3.6e-20  Score=174.94  Aligned_cols=223  Identities=16%  Similarity=0.067  Sum_probs=158.7

Q ss_pred             CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--C
Q 014594          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--S  201 (422)
Q Consensus       124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~  201 (422)
                      ..+|+.-..++++.+++++|.+ +.+++++|+++++..++.+++++||+|+++.|+|......+...|++++.++.+  .
T Consensus        54 l~~~~g~i~~~~~~~A~~~ga~-~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~  132 (294)
T cd00615          54 LLDPTGPIKEAQELAARAFGAK-HTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNP  132 (294)
T ss_pred             CCCCChHHHHHHHHHHHHhCCC-CEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCc
Confidence            3456666889999999999964 355569999999999999999999999999999998888888899999988743  2


Q ss_pred             C----CCCCHHHHHHHhhc-CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccc-cCCCchhhhhhcCCc
Q 014594          202 D----FSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGLESRMEWVKKHDN  274 (422)
Q Consensus       202 ~----~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~-~~~~~~~~~~~~~~~  274 (422)
                      +    ..+|++++++++++ .+++++++++| |++|.+++.+++.++++. |+++|+||+|..+ .+.+.........+.
T Consensus       133 ~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~  211 (294)
T cd00615         133 YYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGA  211 (294)
T ss_pred             ccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcCC
Confidence            2    37899999999964 57899999998 799999999999999987 9999999999753 232221222224577


Q ss_pred             EEEEccChhhhccccccceeee-cCHHH--HHHHH---HhcCCCCCcHHHHHHHHHHccCC--hHHHHHHHHHHHHHHHH
Q 014594          275 LIVLRTFSKRAGLAGLRVGYGA-FPLSI--IEYLW---RAKQPYNVSVAAEVAACAALQNP--IYLEVKEALIKERERLF  346 (422)
Q Consensus       275 ~i~~~S~SK~~~~~G~r~G~i~-~~~~~--~~~l~---~~~~~~~~~~~~~~aa~~~L~~~--~~~~~~~~~~~~~~~l~  346 (422)
                      ++++.|++|.+  +|++.|+++ .+.+.  .+++.   ...+..+++.....++..++..-  +..+..++..++.+.++
T Consensus       212 div~~S~hK~l--~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~~~~~~r  289 (294)
T cd00615         212 DIVVQSTHKTL--PALTQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAMMALEGKELVEELIELALYAR  289 (294)
T ss_pred             cEEEEchhccc--chHhHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            89999999964  777765544 43321  12222   22233455555444444444321  11124455556666666


Q ss_pred             HHHc
Q 014594          347 KLLK  350 (422)
Q Consensus       347 ~~L~  350 (422)
                      +.|+
T Consensus       290 ~~l~  293 (294)
T cd00615         290 QEIN  293 (294)
T ss_pred             HHHh
Confidence            6554

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=99.86  E-value=4.9e-19  Score=176.06  Aligned_cols=327  Identities=15%  Similarity=0.121  Sum_probs=208.9

Q ss_pred             CCCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CC---CC--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK---FP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~---~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      ..+++++||+..+.  ..++ .+|+|.+++.+ +.   +.  ..+..+...+|.++|+++.+-..+.+++++++++|++.
T Consensus        39 d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~  118 (433)
T PRK08117         39 GVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEG  118 (433)
T ss_pred             eCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHH
Confidence            34678899998873  3343 57888888876 22   11  12334456788999999884345689999999999999


Q ss_pred             HHHHh--cCCCCEEEEcCCCchhHHHHHH-HcC--C-----------EEEEecCCCCCC------------CCHHHHHHH
Q 014594          162 IMRCV--LDPGDKIVDCPPTFTMYEFDAA-VNG--A-----------AVVKVPRKSDFS------------LNVELIADA  213 (422)
Q Consensus       162 ~~~~l--~~~gd~Vl~~~p~y~~~~~~~~-~~g--~-----------~~~~v~~~~~~~------------~d~~~l~~~  213 (422)
                      +++..  .....+|+.....|++....+. ..+  .           .+..+|..+.+.            -|++.+++.
T Consensus       119 AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  198 (433)
T PRK08117        119 ALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESL  198 (433)
T ss_pred             HHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHH
Confidence            99952  1223678888888876443322 111  0           122333211110            145667776


Q ss_pred             hhc----CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhh
Q 014594          214 VER----EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR  284 (422)
Q Consensus       214 i~~----~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~  284 (422)
                      +++    .++.+|++.......|.+.+    .+++.++|+. |+++|+||+|.+|...+..... ...+...-+.+|+|.
T Consensus       199 ~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~-~~~gv~pDi~t~sK~  277 (433)
T PRK08117        199 FKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAA-QTFGVVPDIMTIAKG  277 (433)
T ss_pred             HHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhH-hhcCCCCCEeehhhh
Confidence            542    45778888877888899887    6777777776 9999999999987654432211 122222234689999


Q ss_pred             hccccccceeeecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCccc
Q 014594          285 AGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPY  358 (422)
Q Consensus       285 ~~~~G~r~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~  358 (422)
                      ++ +|+++|++++++++++.+....  ..++.++++++++.++|+.-+.....++++++.+++.+.|++    ++.+.-.
T Consensus       278 lg-~G~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v  356 (433)
T PRK08117        278 IA-SGLPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAALATLEVIKEEKLLDNANEMGAYALERLEVLKEKHPVIGDV  356 (433)
T ss_pred             cc-CCCcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCceeee
Confidence            98 8999999999999988774332  236778999999988886321111455556666666666654    3322224


Q ss_pred             CCCceEEEEEeCCC------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          359 PSYSNFILCEVTSG------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       359 p~~~~f~~~~~~~~------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +..|.++++++.+.      .....+.+.+.++||.+.+...  ..+++|+++....+.++++++++++
T Consensus       357 rg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~--~~~~lRl~p~~~~t~~~i~~~~~~l  423 (433)
T PRK08117        357 RGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCGN--AGNVLRMIPPLTVTKEEIDEGLDIL  423 (433)
T ss_pred             ecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecCC--CCCEEEEeCCccCCHHHHHHHHHHH
Confidence            56677777777321      1245677888899999876432  2579999965322234455555543

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=99.85  E-value=8.3e-19  Score=172.31  Aligned_cols=322  Identities=14%  Similarity=0.132  Sum_probs=205.9

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCC-C---CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFP-Y---IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~-~---~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      ..+++.++|+..+.  ..+ ..+|++.+++.+ +... +   .+......+|-+.|.+..+. .+.+++++++++|++.+
T Consensus        36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~-~~~v~f~~sGseA~e~A  114 (408)
T PRK04612         36 DDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNVFYSAPPLKLAEELVTASRF-AEKVFLCNSGTEANEAA  114 (408)
T ss_pred             ECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhCCC-CCEEEEcCchHHHHHHH
Confidence            45678899998774  233 357888888876 3211 1   12222345677777766542 36899999999999999


Q ss_pred             HHHhcC--------CC-CEEEEcCCCchhHHHHHHH-cCCEEEE---ecCCCC----CCCCHHHHHHHhhcCCCeEEEEe
Q 014594          163 MRCVLD--------PG-DKIVDCPPTFTMYEFDAAV-NGAAVVK---VPRKSD----FSLNVELIADAVEREKPKCIFLT  225 (422)
Q Consensus       163 ~~~l~~--------~g-d~Vl~~~p~y~~~~~~~~~-~g~~~~~---v~~~~~----~~~d~~~l~~~i~~~~~~~i~l~  225 (422)
                      ++....        ++ .+|+....+|++....+.. .|.....   -+...+    ...|++.+++.+. .+..+.++.
T Consensus       115 lklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~aavi~  193 (408)
T PRK04612        115 IKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMA-GGDVAAVML  193 (408)
T ss_pred             HHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhC-CCCEEEEEE
Confidence            984321        12 4689999999765543332 2211110   010111    0137899999886 344555556


Q ss_pred             CCCCccCcCCC--HHHHHH---HHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCH
Q 014594          226 SPNNPDGSIIN--DEDLLK---ILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (422)
Q Consensus       226 ~p~NPtG~~~~--~e~l~~---i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~  299 (422)
                      .|.+++|.+++  .+.+.+   +|+. |+++|+||+|..|...+..... ...+....+.+|||.++ +|+|+|++++++
T Consensus       194 eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~-~~~~~~pdi~t~~K~l~-~G~piga~~~~~  271 (408)
T PRK04612        194 EPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAH-WQEQVTPDIVTLAKALG-GGFPIGAMLAGP  271 (408)
T ss_pred             CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhh-hhcCCCCCEEEEcchhc-CCCceEEEEECH
Confidence            67777887765  334444   5554 9999999999987654433222 23345567789999998 899999999999


Q ss_pred             HHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCcccCCCceEEEEEeCC--
Q 014594          300 SIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPYPSYSNFILCEVTS--  371 (422)
Q Consensus       300 ~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~f~~~~~~~--  371 (422)
                      ++.+.+....  ..|+.+++.+.++.++|+.-+-.+..++.+++.+++.+.|++    .+.+......|.++.+.+..  
T Consensus       272 ~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~  351 (408)
T PRK04612        272 KVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAH  351 (408)
T ss_pred             HHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCch
Confidence            9887775432  246788999999998886422111556666666666666655    34333345667788787742  


Q ss_pred             CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594          372 GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       372 ~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  420 (422)
                      ...+..+.+.|.++||.+.+..    .+.+|+.....-+.++++++++.
T Consensus       352 ~~~a~~i~~~l~~~Gvlv~~~g----~~~lRl~Ppl~it~eeid~~l~~  396 (408)
T PRK04612        352 AGQAGAILDLAAEHGLLLLQAG----PDVLRFVPALNLTDAELADGLAR  396 (408)
T ss_pred             hhHHHHHHHHHHHCCeEEeeCC----CCEEEEcCCccCCHHHHHHHHHH
Confidence            1235678888999999998753    47899986532222444444443

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=99.85  E-value=7.1e-19  Score=174.51  Aligned_cols=321  Identities=18%  Similarity=0.179  Sum_probs=199.6

Q ss_pred             CCCCCCeEEcCCC--CCCC-CCCHHHHHHHhc-CCCCCC----C-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           91 GRKPEDIVKIDAN--ENPY-GPPPEVREALGQ-LKFPYI----Y-PDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~-~~~~~v~~al~~-~~~~~~----y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      +.+++.++|+..+  ...+ ..+|++.+++.+ +.....    | ..+...+|-+.|++..+..-+.+++++++++|++.
T Consensus        37 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~  116 (443)
T PRK08360         37 DIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIYGFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDG  116 (443)
T ss_pred             ECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHH
Confidence            3567889999887  3334 357888888876 322111    1 22234567777777765444689999999999999


Q ss_pred             HHHHhc--CCCCEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCC----CC--------CCHHHHHHHh
Q 014594          162 IMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSD----FS--------LNVELIADAV  214 (422)
Q Consensus       162 ~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~----~~--------~d~~~l~~~i  214 (422)
                      +++.-.  ....+|+.....|++....+.. .|.            .+..++.++.    +.        -+++.+++.+
T Consensus       117 AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  196 (443)
T PRK08360        117 AIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKF  196 (443)
T ss_pred             HHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHH
Confidence            999432  2236788888888754322211 221            1222332111    10        1244566666


Q ss_pred             hc----CCCeEEEEeCCCCccCcCCC-H---HHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChh
Q 014594          215 ER----EKPKCIFLTSPNNPDGSIIN-D---EDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSK  283 (422)
Q Consensus       215 ~~----~~~~~i~l~~p~NPtG~~~~-~---e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK  283 (422)
                      .+    +++++|+++..+||+|.+++ .   +++.++|+. |+++|+||+|.+|...+..  ....+..++++   ++||
T Consensus       197 ~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDii---tlsK  273 (443)
T PRK08360        197 EGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDII---TLGK  273 (443)
T ss_pred             HhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEE---Eecc
Confidence            42    56889998876799999887 3   344445554 9999999999988654432  12222334433   6799


Q ss_pred             hhccccccceeeecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHc----cCCCCcc
Q 014594          284 RAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLK----DVPFLNP  357 (422)
Q Consensus       284 ~~~~~G~r~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~  357 (422)
                      .++ +|+|+||+++++++++.+....  ..++.+++.+.++.++|+.-+-.+..++.+++.+++.+.|+    +.+.+.-
T Consensus       274 ~l~-~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~  352 (443)
T PRK08360        274 PLG-GGLPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIGD  352 (443)
T ss_pred             ccc-CCceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCeee
Confidence            999 8999999999999998886443  24667888888888888641100144444555555555544    3443333


Q ss_pred             cCCCceEEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          358 YPSYSNFILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       358 ~p~~~~f~~~~~~~~--------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      ....|.++-+++.+.        .....+.+.|.++||.+.+..    .+.+|++..   +.++++++.++++
T Consensus       353 vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lr~~P~l~~t~~~id~~~~~l~  421 (443)
T PRK08360        353 VRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFFS----GNVLRIQPPLTIEKEVLDEGLDILE  421 (443)
T ss_pred             eeccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeecC----CCEEEEeCCCCCCHHHHHHHHHHHH
Confidence            345677777776321        123467788889999987643    478999765   3444444444443

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.85  E-value=2.7e-19  Score=168.06  Aligned_cols=319  Identities=17%  Similarity=0.197  Sum_probs=221.2

Q ss_pred             hCCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-C---CC-CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           90 LGRKPEDIVKIDANE--NPY-GPPPEVREALGQ-L---KF-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        90 ~~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~---~~-~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      |+..++++|||..|.  +.+ ..+|.+.+++.+ .   .+ ++.|.++...+|.+.|++..+ ..+.|+++|+++||++.
T Consensus        37 ~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~~~~~~~~la~~L~~~s~-~~d~vff~NSGaEA~Ea  115 (404)
T COG4992          37 WDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFYNEPQAELAEKLVELSP-FADRVFFCNSGAEANEA  115 (404)
T ss_pred             ECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccccCChHHHHHHHHHHhhCc-cccEEEEcCCcHHHHHH
Confidence            456688999998874  444 468999999976 2   22 355666667888888888887 67899999999999999


Q ss_pred             HHHHh---cC-C-CCEEEEcCCCchhHHHHHHHcCCEEEE----ecCCCCC----CCCHHHHHHHhhcCCCeEEEEeCCC
Q 014594          162 IMRCV---LD-P-GDKIVDCPPTFTMYEFDAAVNGAAVVK----VPRKSDF----SLNVELIADAVEREKPKCIFLTSPN  228 (422)
Q Consensus       162 ~~~~l---~~-~-gd~Vl~~~p~y~~~~~~~~~~g~~~~~----v~~~~~~----~~d~~~l~~~i~~~~~~~i~l~~p~  228 (422)
                      +++.-   .. + ..+|+....+|++-...+...+.+..+    -|..+++    --|+++++++++ +++.+|++...+
T Consensus       116 AiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~-~~taAvivEPIQ  194 (404)
T COG4992         116 ALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAID-EDTAAVIVEPIQ  194 (404)
T ss_pred             HHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhc-cCeEEEEEeccc
Confidence            99843   22 2 247888888886443333222222211    0211221    138999999998 599999999999


Q ss_pred             CccCcCCCHHHH----HHHHcC-CCeEEEccCCccccCCCchhhh--hhcCCcEEEEccChhhhccccccceeeecCHHH
Q 014594          229 NPDGSIINDEDL----LKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (422)
Q Consensus       229 NPtG~~~~~e~l----~~i~~~-~~~li~Deay~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~  301 (422)
                      --.|++.+.++.    ++||+. |+++|.||++..+...+.....  .+-.++++   ++.|.+| .|+.+|.+++++.+
T Consensus       195 GEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~---tlaK~Lg-GG~PigA~la~~~~  270 (404)
T COG4992         195 GEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDIL---TLAKALG-GGFPIGAMLATEEI  270 (404)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEE---Eeecccc-CCccceeeEEchhh
Confidence            999999876544    456665 9999999999998766654332  22233333   4679998 88999999999555


Q ss_pred             HHHHH--HhcCCCCCcHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHc----cCCCCcccCCCceEEEEEeCCC
Q 014594          302 IEYLW--RAKQPYNVSVAAEVAACAALQN---PIYLEVKEALIKERERLFKLLK----DVPFLNPYPSYSNFILCEVTSG  372 (422)
Q Consensus       302 ~~~l~--~~~~~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~p~~~~f~~~~~~~~  372 (422)
                      .+.+.  ....+|+.|+++.+++.++|+-   ++.++   +.++..+++.+.|+    +.+.+.-....|.++-+++...
T Consensus       271 ~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~---~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~  347 (404)
T COG4992         271 ASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEGLLE---NVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEP  347 (404)
T ss_pred             hhcCCCCcccCCCCcCHHHHHHHHHHHHHHcchhHHH---HHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCc
Confidence            55443  2234588999999988888763   34444   44444555555554    4454445678899999999644


Q ss_pred             CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          373 MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       373 ~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ..+.++.+.|.++|+++.+..    ++.+|+.....-+.+++.++++++
T Consensus       348 ~~a~~~~~~~~~~gvL~~~a~----~~ViR~~PpL~i~~eei~~~~~~l  392 (404)
T COG4992         348 YRARDIVRALREEGVLVLPAG----PNVIRFLPPLVITEEEIDEALDAL  392 (404)
T ss_pred             ccHHHHHHHHHHCCeEEecCC----CCeEEecCCccCCHHHHHHHHHHH
Confidence            458899999999999998866    579999976433334455554443

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=99.85  E-value=6e-19  Score=174.42  Aligned_cols=325  Identities=13%  Similarity=0.127  Sum_probs=206.8

Q ss_pred             CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC--C---CCCCcchHHHHHHHHHHcCC-CCCCEEEeCCHHHHHH
Q 014594           91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP--Y---IYPDPESRRLRAALAKDSGL-ESDHILVGCGADELID  160 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~--~---~y~~~~~~~lr~~la~~~~~-~~~~i~~~~G~~~al~  160 (422)
                      +.+++.++|+..+..  .+ ..+|++.+++.+ +...  .   .++.+...++-+.+++.... ..+.+++++++++|++
T Consensus        36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e  115 (421)
T PRK06777         36 DVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVE  115 (421)
T ss_pred             eCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHH
Confidence            456788999987742  23 357888888876 3211  1   12333455777888877653 2468999999999999


Q ss_pred             HHHHHhc--CCCCEEEEcCCCchhHHHHHHH-cCCE-------------EEEecCCCC-CC----CCHHHHHHHhhc---
Q 014594          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGAA-------------VVKVPRKSD-FS----LNVELIADAVER---  216 (422)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~~-------------~~~v~~~~~-~~----~d~~~l~~~i~~---  216 (422)
                      .+++.-.  ....+|+....+|++....+.. .|..             +..++.++. .+    -+++.+++.+.+   
T Consensus       116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~  195 (421)
T PRK06777        116 NAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIA  195 (421)
T ss_pred             HHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccC
Confidence            9998432  2235788888889766544432 2210             112221111 11    236667777742   


Q ss_pred             -CCCeEEEEeCCCCccCc-CCCHHHHHHHHc---C-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChhhhccc
Q 014594          217 -EKPKCIFLTSPNNPDGS-IINDEDLLKILE---M-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLA  288 (422)
Q Consensus       217 -~~~~~i~l~~p~NPtG~-~~~~e~l~~i~~---~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK~~~~~  288 (422)
                       .++.+|++....+..|. +.+.+.+++|.+   . |+++|+||+|..|...+...  ...+..+++   .++||.++ +
T Consensus       196 ~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDi---v~~sK~l~-~  271 (421)
T PRK06777        196 PDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDL---ITMAKSLG-G  271 (421)
T ss_pred             CCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCE---Eeeehhhc-C
Confidence             45788888877888886 567666655544   4 99999999999886544321  122222332   36899999 8


Q ss_pred             cccceeeecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC----CCCcccCCCc
Q 014594          289 GLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV----PFLNPYPSYS  362 (422)
Q Consensus       289 G~r~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~  362 (422)
                      |+|+||+++++++++.+....  ..++.+++.+.++.++|+..+..+..++.+++.+++.+.|+++    +.+......|
T Consensus       272 G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G  351 (421)
T PRK06777        272 GMPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCPAIVDIRARG  351 (421)
T ss_pred             CCceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCce
Confidence            999999999999988775433  3477899999999999963221126667777777777777653    4333234555


Q ss_pred             eEEEEEeCC---CCC----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          363 NFILCEVTS---GMD----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       363 ~f~~~~~~~---~~~----~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .++.+.+..   +.+    ...+...+.++||.+.++..+  ++++||.+....+.++++++++++
T Consensus       352 ~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~--g~~lr~~ppl~i~~~~i~~~~~~l  415 (421)
T PRK06777        352 SMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVH--GNVIRFLYPLTIPDAQFSKALNIL  415 (421)
T ss_pred             EEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCC--CCEEEEeCCCCCCHHHHHHHHHHH
Confidence            555555431   111    234555567899999887533  379999985333345566666654

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.85  E-value=9.6e-19  Score=172.90  Aligned_cols=213  Identities=16%  Similarity=0.157  Sum_probs=155.9

Q ss_pred             CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhH----HHHHHHcCCEEEEecCCCC
Q 014594          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPRKSD  202 (422)
Q Consensus       127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~  202 (422)
                      +++....|+++++++.|.+  ..++++++++|+..++.+++++||+|+++.+.|...    ...+...|++++.++.   
T Consensus        61 ~~p~~~~le~~lA~l~g~~--~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~---  135 (427)
T PRK05994         61 TNPTNAVLEERVAALEGGT--AALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA---  135 (427)
T ss_pred             CCccHHHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC---
Confidence            4556788999999999964  478889999999999999999999999999999743    3345668999999874   


Q ss_pred             CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccC
Q 014594          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (422)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~  281 (422)
                        .|++.++++++ +++++|++++|+||||.+.+.+++.++++. |+++|+|++|...... ..   + ..+.++++.|+
T Consensus       136 --~d~~~l~~ai~-~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~-~p---l-~~gaDivv~S~  207 (427)
T PRK05994        136 --DDPASFERAIT-PRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLI-RP---I-EHGADIVVHSL  207 (427)
T ss_pred             --CCHHHHHHhcC-cCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccC-Cc---c-ccCCcEEEEcC
Confidence              37899999997 689999999999999999999999999987 9999999999732211 11   1 23556899999


Q ss_pred             hhhhccccccceeeecC-HH-----------------------HHHHHH-----------Hhc-CCCCCcHHHHHHHHHH
Q 014594          282 SKRAGLAGLRVGYGAFP-LS-----------------------IIEYLW-----------RAK-QPYNVSVAAEVAACAA  325 (422)
Q Consensus       282 SK~~~~~G~r~G~i~~~-~~-----------------------~~~~l~-----------~~~-~~~~~~~~~~~aa~~~  325 (422)
                      +|.+|.+|-.+|.+++. ..                       +.+.+.           ... ....++++....+...
T Consensus       208 tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~~  287 (427)
T PRK05994        208 TKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILTG  287 (427)
T ss_pred             ccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHcC
Confidence            99887666555644431 11                       111100           011 1123444444433333


Q ss_pred             ccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594          326 LQNPIYLE-VKEALIKERERLFKLLKDVPFL  355 (422)
Q Consensus       326 L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~  355 (422)
                      |   +.+. +.++..++...+.+.|++++.+
T Consensus       288 l---~tL~~r~~~~~~~a~~la~~L~~~p~v  315 (427)
T PRK05994        288 I---ETLPLRMQRHSDNALAVAEWLKGHPKV  315 (427)
T ss_pred             c---ccHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            3   3455 7778888899999999987654

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.84  E-value=1e-18  Score=173.22  Aligned_cols=319  Identities=17%  Similarity=0.117  Sum_probs=206.9

Q ss_pred             CCCCCeEEcCCCCCCC---CCCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594           92 RKPEDIVKIDANENPY---GPPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (422)
Q Consensus        92 ~~~~~~i~l~~~~~~~---~~~~~v~~al~~-~~~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~  165 (422)
                      .+++.++|+..+....   ..+|.+.+++.+ +...  ..++.+...+|.++|++.+. ..+.+++++++++|++.+++.
T Consensus        47 ~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~la~~L~~~~~-~~~~v~~~~sGseA~e~Aik~  125 (426)
T PRK00062         47 VDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGLSFGAPTELEVELAELVIELVP-SIEMVRMVNSGTEATMSAIRL  125 (426)
T ss_pred             CCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCC-CCCEEEEecCHHHHHHHHHHH
Confidence            4577899998875332   467888888876 3222  22355566789999988774 356899999999999999996


Q ss_pred             hcC--CCCEEEEcCCCchhHHHHHHHc-CC------------EEEEecCC--CCCCCCHHHHHHHhhc--CCCeEEEEeC
Q 014594          166 VLD--PGDKIVDCPPTFTMYEFDAAVN-GA------------AVVKVPRK--SDFSLNVELIADAVER--EKPKCIFLTS  226 (422)
Q Consensus       166 l~~--~gd~Vl~~~p~y~~~~~~~~~~-g~------------~~~~v~~~--~~~~~d~~~l~~~i~~--~~~~~i~l~~  226 (422)
                      ...  .+++|+...++|+++...+... |.            ....++..  .-...|++.+++.+.+  +++.+|+++.
T Consensus       126 a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEp  205 (426)
T PRK00062        126 ARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEP  205 (426)
T ss_pred             HHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeC
Confidence            432  3578999999998876433221 10            00000000  0011378899888853  4677888885


Q ss_pred             CCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch-hhhhhcCCcEEEEccChhhhccccccceeeecCHH
Q 014594          227 PNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (422)
Q Consensus       227 p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~-~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~  300 (422)
                      ....+|.+.+    .+++.+|++. |+++|+||+|..+..+... ....+..+.   +.+|+|.++ .|+++|+++++++
T Consensus       206 v~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~~~~pD---i~~~gK~l~-~G~p~ga~~~~~~  281 (426)
T PRK00062        206 VAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGGAQGYYGVTPD---LTTLGKIIG-GGLPVGAFGGRRE  281 (426)
T ss_pred             CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCccHHHHhCCCcc---hHhhhhHhh-CCCcceeeeEHHH
Confidence            5555899988    5666777766 9999999999977432211 111221122   468899998 8899999999999


Q ss_pred             HHHHHHHhc-----CCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC
Q 014594          301 IIEYLWRAK-----QPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS  371 (422)
Q Consensus       301 ~~~~l~~~~-----~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~  371 (422)
                      +++.+....     ..++.+++.++++.++|+.   .+..+ .++.....++.|.+.++++++....+..|.++.+.+..
T Consensus       282 i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~  361 (426)
T PRK00062        282 IMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTD  361 (426)
T ss_pred             HHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEec
Confidence            998885221     2367888998888888763   33444 55555555666665555666544334566666665531


Q ss_pred             C-C---------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014594          372 G-M---------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM  419 (422)
Q Consensus       372 ~-~---------~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~  419 (422)
                      . .         +   ...+.+.|.++||.+.+..    .+.+|+++. +.++++++.+.++
T Consensus       362 ~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~----~~~~~~~~~~t~~ei~~~~~~l~  419 (426)
T PRK00062        362 EPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQ----FEAGFVSAAHTDEDIEKTLEAAR  419 (426)
T ss_pred             CCCcchhhhccccHHHHHHHHHHHHHCCeEeecCC----cCceeeeccCCHHHHHHHHHHHH
Confidence            1 0         1   3578888899999998754    235667654 3444555555544

>PRK08114 cystathionine beta-lyase; Provisional

Probab=99.84  E-value=1.1e-18  Score=169.04  Aligned_cols=213  Identities=12%  Similarity=0.035  Sum_probs=165.2

Q ss_pred             CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecCCCC
Q 014594          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSD  202 (422)
Q Consensus       127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~  202 (422)
                      .+|....|+++++++-|.  +..+++++++.|+..++.+++++||+|+++...|......    ++..|+++..++.   
T Consensus        60 ~nPt~~~le~~la~LEg~--~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~---  134 (395)
T PRK08114         60 GTLTHFSLQEAMCELEGG--AGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP---  134 (395)
T ss_pred             CChhHHHHHHHHHHHhCC--CeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC---
Confidence            556678899999998873  5788888899999999999999999999999899655443    3558999998873   


Q ss_pred             CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (422)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~  279 (422)
                        .|.+.++++++ +++|+|++.+|.||+|.+.|.+++.++++.   |+++++|.++.....     ......+-++++.
T Consensus       135 --~d~~~l~~~l~-~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-----~~pl~~GaDivv~  206 (395)
T PRK08114        135 --LIGADIAKLIQ-PNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL-----FKALDFGIDISIQ  206 (395)
T ss_pred             --CCHHHHHHhcC-CCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc-----cCHHHcCCcEEEE
Confidence              47899999997 689999999999999999999999999987   499999999974211     1222446679999


Q ss_pred             cChhhhcccc-ccceeeecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594          280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFL  355 (422)
Q Consensus       280 S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~  355 (422)
                      |.+|.++.+| .-.|.++.+++..+.+......  ..+++.....+...|   +-+. +.++..++...+.+.|++++.+
T Consensus       207 S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl---~TL~lR~~~~~~na~~va~~L~~hp~V  283 (395)
T PRK08114        207 AGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSRGL---RTLGVRLRQHEESSLKVAEWLAEHPEV  283 (395)
T ss_pred             cCcccccCCCcceeEEEEcCHHHHHHHHHHHHhccCCCCHHHHHHHHcCC---CcHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence            9999765454 6688788888777766544333  234555544333333   4456 8888999999999999988754

>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]

Probab=99.84  E-value=5.2e-18  Score=151.60  Aligned_cols=310  Identities=15%  Similarity=0.086  Sum_probs=229.7

Q ss_pred             CCCCCCCHHHHHHHhcCCCCCCCCCc-c-hHHHHHHHHHHcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcC-CC
Q 014594          104 ENPYGPPPEVREALGQLKFPYIYPDP-E-SRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCP-PT  179 (422)
Q Consensus       104 ~~~~~~~~~v~~al~~~~~~~~y~~~-~-~~~lr~~la~~~~~~~~-~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~-p~  179 (422)
                      ..|...++.|++|+.....++.-|+. . ..++++-+...|..... -.++...++.+++.++..+++|||.|++.. ..
T Consensus        23 PGPsnl~~~V~~A~~~~~lgh~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~  102 (385)
T KOG2862|consen   23 PGPSNLSGRVQEAMSRPSLGHMSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGT  102 (385)
T ss_pred             CCCcCCCHHHHHhhcCCccccCCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEech
Confidence            34555678899999875544555654 2 46788888888876444 566777789999999999999999988654 56


Q ss_pred             ch-hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC-HHHHHHHHcC-CCeEEEccCC
Q 014594          180 FT-MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN-DEDLLKILEM-PILVVLDEAY  256 (422)
Q Consensus       180 y~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~-~e~l~~i~~~-~~~li~Deay  256 (422)
                      |. .+.+.++..|++|..++.+.+....++.+++.+.++++++++++|....||+..+ .+.+.++++. ++++++|.+-
T Consensus       103 wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~Va  182 (385)
T KOG2862|consen  103 WGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVA  182 (385)
T ss_pred             HHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechh
Confidence            64 6778889999999999988888999999999999899999999999999999999 7888889887 9999999987


Q ss_pred             ccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--------------C-----------
Q 014594          257 TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--------------P-----------  311 (422)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--------------~-----------  311 (422)
                      +-.+.    ....++++.++....-.|++|.|. .++.+.+++...++++..++              +           
T Consensus       183 Slggt----~F~mDewgVDvaytgSQKaL~aP~-GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yh  257 (385)
T KOG2862|consen  183 SLGGT----EFEMDEWGVDVAYTGSQKALGAPA-GLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYH  257 (385)
T ss_pred             hcCCc----cceehhhcccEEEecchhhcCCCC-CcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccc
Confidence            63221    112335566666666689998532 35668888888888875543              1           


Q ss_pred             CCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcc----cCCCceEEEEEeCCCCCHHHHHHHHHh
Q 014594          312 YNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNP----YPSYSNFILCEVTSGMDAKKLKDDLAK  384 (422)
Q Consensus       312 ~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~----~p~~~~f~~~~~~~~~~~~~~~~~L~~  384 (422)
                      ++++....+.+.++|..  ++.++ .+++.+++.+++...|+++|....    .+..-.--.+.+|.+.|..+++.++..
T Consensus       258 hT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp~gvDw~dVv~~~~~  337 (385)
T KOG2862|consen  258 HTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVPYGVDWKDVVAYAMS  337 (385)
T ss_pred             cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecCCCCCHHHHHHHHHH
Confidence            24556667777777765  45566 899999999999999998763321    111122235778889999999999985


Q ss_pred             C-CcEEEeCCCCCCCCeEEEEe-cChhhHHHHHHHH
Q 014594          385 M-GVMIRHYNNKELKGYVRVSV-GKPEHTDALMECL  418 (422)
Q Consensus       385 ~-gI~v~~~~~~~~~~~iRis~-~~~~~~~~l~~al  418 (422)
                      + ++.+..+-.+..+..+||.+ +.....+.++..+
T Consensus       338 ~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~  373 (385)
T KOG2862|consen  338 HYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVV  373 (385)
T ss_pred             hcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHH
Confidence            5 66666665577788999995 3333334444443

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.84  E-value=1.5e-18  Score=171.08  Aligned_cols=241  Identities=15%  Similarity=0.125  Sum_probs=167.9

Q ss_pred             CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEecCCCCC
Q 014594          128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDF  203 (422)
Q Consensus       128 ~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~  203 (422)
                      ++....|++.+++++|.+  ..+++++|+.|+..++.+++++||+|+++...|.....    .+...|++++.++ +.  
T Consensus        68 ~p~~~~Le~~lA~l~g~~--~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d~--  142 (436)
T PRK07812         68 NPTQDVVEQRIAALEGGV--AALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-DP--  142 (436)
T ss_pred             CchHHHHHHHHHHHhCCC--eEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-CC--
Confidence            556789999999999964  46777888889999999999999999999988865432    2344788888885 21  


Q ss_pred             CCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccCh
Q 014594          204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS  282 (422)
Q Consensus       204 ~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~S  282 (422)
                       .|+++++++++ +++++|++++|+||+|.+.+.+++.++++. |+++|+|+++..... ...   + ..+..+++.|++
T Consensus       143 -~d~e~l~~ai~-~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~-~~p---l-~~GaDivv~S~t  215 (436)
T PRK07812        143 -DDLDAWRAAVR-PNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYL-IRP---L-EHGADIVVHSAT  215 (436)
T ss_pred             -CCHHHHHHhCC-CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-CCc---h-hcCCCEEEEecc
Confidence             38999999997 789999999999999999999999999987 999999999874221 111   1 234558889999


Q ss_pred             hhhccccccceeeecC-HH------------------------------HHHHHH---HhcCCCCCcHHHHHHHHHHccC
Q 014594          283 KRAGLAGLRVGYGAFP-LS------------------------------IIEYLW---RAKQPYNVSVAAEVAACAALQN  328 (422)
Q Consensus       283 K~~~~~G~r~G~i~~~-~~------------------------------~~~~l~---~~~~~~~~~~~~~~aa~~~L~~  328 (422)
                      |.+|..|--+|.+++. ..                              ++.+..   .......+++.....+   ++.
T Consensus       216 K~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~---~rg  292 (436)
T PRK07812        216 KYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLI---AQG  292 (436)
T ss_pred             cccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHH---hcC
Confidence            9987666556665553 11                              000111   1111234455443333   333


Q ss_pred             ChHHH-HHHHHHHHHHHHHHHHccCCCCc--ccC-----------------CCceEEEEEeCCC-CCHHHHHHHHH
Q 014594          329 PIYLE-VKEALIKERERLFKLLKDVPFLN--PYP-----------------SYSNFILCEVTSG-MDAKKLKDDLA  383 (422)
Q Consensus       329 ~~~~~-~~~~~~~~~~~l~~~L~~~~~~~--~~p-----------------~~~~f~~~~~~~~-~~~~~~~~~L~  383 (422)
                      -+-+. +.++..++...+.+.|++++.+.  .+|                 ..|..+.+++.++ ..+.+|.+.|.
T Consensus       293 l~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~  368 (436)
T PRK07812        293 LETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAGGVEAGKAFVNALT  368 (436)
T ss_pred             cCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCC
Confidence            34455 88888999999999999887553  233                 1245667777532 12445666654

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.84  E-value=1.1e-18  Score=172.31  Aligned_cols=214  Identities=14%  Similarity=0.122  Sum_probs=156.4

Q ss_pred             CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecCCC
Q 014594          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKS  201 (422)
Q Consensus       126 y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~  201 (422)
                      +..+...+|+++++++.|.+  ..++++++++|+.+++.+++++||+|+++...|......    +...|++++.++.+ 
T Consensus        61 ~~~p~~~~le~~lA~l~g~~--~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-  137 (433)
T PRK08134         61 ISNPTVAVLEERVAALEGGV--GAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPG-  137 (433)
T ss_pred             CcChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCC-
Confidence            34556789999999999964  478899999999999998999999999999999754333    34589999999853 


Q ss_pred             CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEcc
Q 014594          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT  280 (422)
Q Consensus       202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S  280 (422)
                          |+++++++++ +++|+|++++|+||+|.+.+.+++.++++. |+++|+|.+|...... ..   + ..+.++++.|
T Consensus       138 ----d~~~l~~~i~-~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~-~p---l-~~GaD~vv~S  207 (433)
T PRK08134        138 ----DIDGWRAAIR-PNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLL-RP---F-EHGADLVYHS  207 (433)
T ss_pred             ----CHHHHHHhcC-CCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccC-Cc---h-hcCCCEEEec
Confidence                7999999997 789999999999999999999999999987 9999999998742221 11   1 3455699999


Q ss_pred             ChhhhccccccceeeecC-HH--------------------------------HHHHHH-HhcC--CCCCcHHHHHHHHH
Q 014594          281 FSKRAGLAGLRVGYGAFP-LS--------------------------------IIEYLW-RAKQ--PYNVSVAAEVAACA  324 (422)
Q Consensus       281 ~SK~~~~~G~r~G~i~~~-~~--------------------------------~~~~l~-~~~~--~~~~~~~~~~aa~~  324 (422)
                      .+|.++.+|-.+|.+++. ..                                +..+.. ....  ...+++.....+. 
T Consensus       208 ~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~-  286 (433)
T PRK08134        208 ATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAWQLL-  286 (433)
T ss_pred             cccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHHHHh-
Confidence            999887677556655442 10                                000010 0001  1233444333333 


Q ss_pred             HccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594          325 ALQNPIYLE-VKEALIKERERLFKLLKDVPFL  355 (422)
Q Consensus       325 ~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~  355 (422)
                        ..-+.+. +.++..++...+.+.|++++.+
T Consensus       287 --~gL~tl~~R~~~~~~nA~~la~~L~~~p~V  316 (433)
T PRK08134        287 --QGIETLPLRMERHVANTRKVVAFLASHPAV  316 (433)
T ss_pred             --cCCCcHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence              3323455 7788889999999999987654

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=99.84  E-value=1.2e-18  Score=172.40  Aligned_cols=248  Identities=17%  Similarity=0.091  Sum_probs=174.1

Q ss_pred             cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh---------cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC
Q 014594          129 PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV---------LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR  199 (422)
Q Consensus       129 ~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l---------~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~  199 (422)
                      +...+|+++++++++.+  ++++++|+++++..++.++         +++||+|+++.|+|..+...+...|++++.++.
T Consensus        63 ~~~~~fe~~lA~~~g~~--~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdv  140 (438)
T PRK15407         63 RFNDAFEKKLAEFLGVR--YALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDV  140 (438)
T ss_pred             hhHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEec
Confidence            34689999999999964  7999999999999998876         478999999999999999888899999999986


Q ss_pred             C-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCCchhhhhhcCCcEE
Q 014594          200 K-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLI  276 (422)
Q Consensus       200 ~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~~~~~~~~~~~~~i  276 (422)
                      + .++.+|++.+++.++ +++++|+++|+   +|...+.+++.++++. |++||+|++|+... +.+.....++    .+
T Consensus       141 d~~~~~id~~~le~~i~-~~tkaVi~~~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~g----d~  212 (438)
T PRK15407        141 ELPTYNIDASLLEAAVS-PKTKAIMIAHT---LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFG----DI  212 (438)
T ss_pred             CCCcCCcCHHHHHHHcC-cCCeEEEEeCC---CCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccC----ce
Confidence            5 568899999999997 68999998764   7788899999999987 99999999998654 2333333222    25


Q ss_pred             EEccC--hhhhccccccceeeecCH-HHHHHHHHhcCC-----------------------------------------C
Q 014594          277 VLRTF--SKRAGLAGLRVGYGAFPL-SIIEYLWRAKQP-----------------------------------------Y  312 (422)
Q Consensus       277 ~~~S~--SK~~~~~G~r~G~i~~~~-~~~~~l~~~~~~-----------------------------------------~  312 (422)
                      .+.||  +|.+. .|- .|+++++. ++.+.+......                                         +
T Consensus       213 ~~fSf~~~k~~~-~ge-GG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~  290 (438)
T PRK15407        213 ATLSFYPAHHIT-MGE-GGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNL  290 (438)
T ss_pred             EEEeCCCCCCcc-ccC-ceEEEECCHHHHHHHHHHHHhCccccccccccccccccccccccccccccccccccccccccc
Confidence            66677  46664 343 58888864 454444322110                                         1


Q ss_pred             CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC-Ccc--cCCCc---eEE-EEEeCC--CCCHHHHHHHH
Q 014594          313 NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF-LNP--YPSYS---NFI-LCEVTS--GMDAKKLKDDL  382 (422)
Q Consensus       313 ~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~-~~~--~p~~~---~f~-~~~~~~--~~~~~~~~~~L  382 (422)
                      .++.+..+.+...|+   .++ ..++-+++.+++.+.|.+++. +..  .+.+.   .|. .+.+++  +.+.+++.+.|
T Consensus       291 rmsel~AAig~~qL~---~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Rd~l~~~L  367 (438)
T PRK15407        291 KITDMQAAIGLAQLE---KLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAGFTRVELVKYL  367 (438)
T ss_pred             CccHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCCCCHHHHHHHH
Confidence            122233333333332   233 555666777778888877652 221  12222   222 244432  35689999999


Q ss_pred             HhCCcEEEe
Q 014594          383 AKMGVMIRH  391 (422)
Q Consensus       383 ~~~gI~v~~  391 (422)
                      .++||..+.
T Consensus       368 ~~~GI~~~~  376 (438)
T PRK15407        368 EENKIGTRL  376 (438)
T ss_pred             HHCCCCccc
Confidence            999998764

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=99.84  E-value=1.8e-18  Score=159.37  Aligned_cols=308  Identities=17%  Similarity=0.185  Sum_probs=215.1

Q ss_pred             CCCCCCCCHHHHHHHhcCC--CCCCCCC-cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 014594          103 NENPYGPPPEVREALGQLK--FPYIYPD-PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT  179 (422)
Q Consensus       103 ~~~~~~~~~~v~~al~~~~--~~~~y~~-~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~  179 (422)
                      ++|.-++.|+++++|.+..  ....|++ +....+++.+++.+|.  +.+++++++|++..+++.+.++||+.|++..-.
T Consensus         6 SDn~~g~~~~m~eam~~a~~~~~~~YG~D~~~~~~e~~~ae~~g~--~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~~a   83 (342)
T COG2008           6 SDNVAGPTPEMREALAAANAVGDDVYGEDPTTNALEQRIAELFGK--EAALFVPSGTQANQLALAAHCQPGESVICHETA   83 (342)
T ss_pred             cCccCCCCHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHhCC--ceEEEecCccHHHHHHHHHhcCCCCeEEEeccc
Confidence            3666778899999998754  3367854 4578999999999996  789999999999999999999999999998887


Q ss_pred             chhHH---HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCCHHHHHHHHcC----C
Q 014594          180 FTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM----P  247 (422)
Q Consensus       180 y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~  247 (422)
                      |....   ......++..+.+....+..+++++++..+..+     .+.++++.+.+|.-|.++|+++|++|.+.    |
T Consensus        84 Hi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~  163 (342)
T COG2008          84 HIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHG  163 (342)
T ss_pred             cceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhC
Confidence            74221   122223444444444466789999999987532     34555556666688999999999998775    9


Q ss_pred             CeEEEccCCcccc--CCCchhhhhhcCCcEEEEccChhhhcccccccee-eecCHHHHHHHHHhcCC----CCCcHHHHH
Q 014594          248 ILVVLDEAYTEFS--GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY-GAFPLSIIEYLWRAKQP----YNVSVAAEV  320 (422)
Q Consensus       248 ~~li~Deay~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~-i~~~~~~~~~l~~~~~~----~~~~~~~~~  320 (422)
                      +.|.+|.+-....  ..+.....+..+- +++..++||..+.++   |. ++++.++++++...+..    +.-..+..+
T Consensus       164 l~LHmDGAR~~nA~valg~~~~~~~~~~-D~v~~~~tK~g~~~~---gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA  239 (342)
T COG2008         164 LPLHMDGARLANALVALGVALKTIKSYV-DSVSFCLTKGGGAPV---GAIVFGNRDFAKRARRWRKRAGGLMRKARFLAA  239 (342)
T ss_pred             CceeechHHHHHHHHHcCCCHHHHHhhC-CEEEEecccCCccee---eeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHH
Confidence            9999999865322  1122333333332 355557899877665   54 55699999988765543    455677888


Q ss_pred             HHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCC-
Q 014594          321 AACAALQNPIYLEVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELK-  398 (422)
Q Consensus       321 aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~-  398 (422)
                      +...+|++.-|...-.+-.++.++|.+.|+..++.. ..|..+|.+++++++     ...+.|...|+....+-..... 
T Consensus       240 ~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~-----~~i~~l~~~~~~~~~~~~~~~~~  314 (342)
T COG2008         240 QGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPE-----SAIEALRLAGALFYRGVLIGAHG  314 (342)
T ss_pred             HHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECCh-----HHHHHHHhhchhheeeeeccCCC
Confidence            888999988887655566667999999999765555 456899999999973     2225555555444432211111 


Q ss_pred             CeEEEEec---ChhhHHHHHHHHhhh
Q 014594          399 GYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       399 ~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      ..+|+..+   +.++++++...++.+
T Consensus       315 ~~vRfvts~a~~~edv~~~~~~~~~~  340 (342)
T COG2008         315 EIVRFVTSWATSEEDVDELVAAIKAL  340 (342)
T ss_pred             ceEEEEeeccCCHHHHHHHHHHHHHh
Confidence            47999876   345566666666543

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.84  E-value=2.5e-18  Score=163.27  Aligned_cols=264  Identities=19%  Similarity=0.229  Sum_probs=186.7

Q ss_pred             HHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHH
Q 014594          111 PEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAA  188 (422)
Q Consensus       111 ~~v~~al~~~-~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~  188 (422)
                      .+..+++.+. ..++.-+.+...++++++++++|+  .+.+.++++|.|+.++++++ +.|||+|++++-+|........
T Consensus        15 ~~e~~~v~~vl~sg~i~~G~~v~~FE~~~ae~~G~--k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan~i~   92 (374)
T COG0399          15 EEELAAVQEVLKSGWLTGGPFVRRFEQAFAEYLGV--KYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATANAVL   92 (374)
T ss_pred             hHHHHHHHHHHHcCCeecChHHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHHHHH
Confidence            4445556553 322222334578999999999996  58999999999999999966 6999999999999999999999


Q ss_pred             HcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCCch
Q 014594          189 VNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESR  265 (422)
Q Consensus       189 ~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~~~  265 (422)
                      ..|++++.++.+ +.+.+|++.+|++|+ +++|+|+   |-+--|...+.+.|.+|++. |++||+|.+++..+ +.+..
T Consensus        93 ~~Ga~PVFvDid~~T~nid~~~ie~aIt-~~tKAIi---pVhl~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~  168 (374)
T COG0399          93 LVGAKPVFVDIDPDTLNIDPDLIEAAIT-PRTKAII---PVHLAGQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGKK  168 (374)
T ss_pred             HcCCeEEEEecCCcccCCCHHHHHHHcc-cCCeEEE---EehhccCCCCHHHHHHHHHHcCCeEEEEcchhccCeecCcc
Confidence            999999999976 568999999999998 6899999   55668999999999999998 99999999998655 44444


Q ss_pred             hhhhhcCCcEEEEccC--hhhhccccccceeeecC-HHHHHHHHHhcCC------------------CCCcHHHHHHHHH
Q 014594          266 MEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP------------------YNVSVAAEVAACA  324 (422)
Q Consensus       266 ~~~~~~~~~~i~~~S~--SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~------------------~~~~~~~~~aa~~  324 (422)
                      ...+++    +.+.||  +|.+. .| -.|.++.+ +++.++++..+..                  +.++.+.++....
T Consensus       169 vGt~Gd----~~~fSF~~~K~it-tg-EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~  242 (374)
T COG0399         169 VGSFGD----IGAFSFHATKNLT-TG-EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLA  242 (374)
T ss_pred             cccccc----eEEEEecCCCCcc-cc-CceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHH
Confidence            444432    666677  68886 45 56888874 5677776643211                  1223333333334


Q ss_pred             HccCChHHH-HHHHHHHHHHHHHHHHccCCCCcc--cCCCc---eEE-EEEeCC-CCCHHHHHHHHHhCCcEE
Q 014594          325 ALQNPIYLE-VKEALIKERERLFKLLKDVPFLNP--YPSYS---NFI-LCEVTS-GMDAKKLKDDLAKMGVMI  389 (422)
Q Consensus       325 ~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~---~f~-~~~~~~-~~~~~~~~~~L~~~gI~v  389 (422)
                      .|+.   ++ ..++-++..+...+.|++++.+..  .+...   .++ .+.+++ +.+.+.+.+.|.++||..
T Consensus       243 QL~~---l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~~~~R~~l~~~L~~~gi~~  312 (374)
T COG0399         243 QLER---LDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEEGISRDALMESLKEAGVGA  312 (374)
T ss_pred             HHHH---HHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCCCCCHHHHHHHHHhCCCCc
Confidence            4433   22 444445556666677776653332  22222   222 244543 367889999999987664

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=99.83  E-value=2e-18  Score=172.34  Aligned_cols=322  Identities=16%  Similarity=0.116  Sum_probs=191.8

Q ss_pred             CCCCCCeEEcCCCCCC--C-CCCHHHHHHHhc-CCCCC-----CCCCcchHHHHHHHHHHcCCCC-CCEEEeCCHHHHHH
Q 014594           91 GRKPEDIVKIDANENP--Y-GPPPEVREALGQ-LKFPY-----IYPDPESRRLRAALAKDSGLES-DHILVGCGADELID  160 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~~--~-~~~~~v~~al~~-~~~~~-----~y~~~~~~~lr~~la~~~~~~~-~~i~~~~G~~~al~  160 (422)
                      +.+++.+||+..+...  + ..+|.+.+++.+ +....     .+..+...+|.+.|++..+... +.++++++|++|++
T Consensus        50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e  129 (451)
T PRK06918         50 DVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFNVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVE  129 (451)
T ss_pred             eCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccccccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHH
Confidence            4567889999887432  3 357888888876 32211     1223345677788887775322 58999999999999


Q ss_pred             HHHHHhc--CCCCEEEEcCCCchhHHHHHHH-cCC-------------EEEEecCCCC----CCCC--------HHHHHH
Q 014594          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSD----FSLN--------VELIAD  212 (422)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~----~~~d--------~~~l~~  212 (422)
                      .+++.-.  ....+|+....+|++....+.. .|.             .+..+|....    .+..        ++.+++
T Consensus       130 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (451)
T PRK06918        130 NAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKN  209 (451)
T ss_pred             HHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHH
Confidence            9999432  2236788889889765544332 121             1222332110    1111        123333


Q ss_pred             Hh----hcCCCeEEEEeCCCCccCcCCC-HHHHHHHH---cC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccC
Q 014594          213 AV----EREKPKCIFLTSPNNPDGSIIN-DEDLLKIL---EM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTF  281 (422)
Q Consensus       213 ~i----~~~~~~~i~l~~p~NPtG~~~~-~e~l~~i~---~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~  281 (422)
                      .+    ..+++.+|++...+.-.|.+++ .+.+++|.   +. |+++|+||+|.+|...+...  ...+..++   +.||
T Consensus       210 ~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pD---i~t~  286 (451)
T PRK06918        210 FFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPD---LITV  286 (451)
T ss_pred             HHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCC---EEee
Confidence            33    2245667776644444576554 34355554   44 99999999999886544322  22221222   4489


Q ss_pred             hhhhccccccceeeecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHcc----C
Q 014594          282 SKRAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKD----V  352 (422)
Q Consensus       282 SK~~~~~G~r~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~----~  352 (422)
                      ||.++ +|+|+||+++++++++.+....  ..++.+++.+.++.++|+   ++.   ..++.++..+++.+.|++    +
T Consensus       287 sK~l~-~G~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~l~~l~~~~  362 (451)
T PRK06918        287 SKSLG-AGVPISGVIGRKEIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKEN---LNDRAIELGKVVMNRFEEMKNKY  362 (451)
T ss_pred             ehhhc-CCCccEEEEEcHHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHhhC
Confidence            99998 8999999999999988775333  347889999999777774   233   333344444444444433    3


Q ss_pred             CCCc-ccCCCceEEEEEeC-------CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          353 PFLN-PYPSYSNFILCEVT-------SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       353 ~~~~-~~p~~~~f~~~~~~-------~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +.+. +.+.++++.|....       +......+.+.+.++||.+.++..+  .+++||+++...+.+++++++++|
T Consensus       363 ~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~--~~~lrl~p~l~~t~~~id~~l~~l  437 (451)
T PRK06918        363 NCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTY--GNVIRVLMPLVITDEQLEEGLTII  437 (451)
T ss_pred             CCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCC--CCEEEEECCCccCHHHHHHHHHHH
Confidence            4322 33444444443321       1112456777778999999986533  478999986422235566665554

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=99.83  E-value=3.5e-18  Score=167.00  Aligned_cols=300  Identities=11%  Similarity=0.059  Sum_probs=201.8

Q ss_pred             CCCCCCCHH-HHHHHhcCCC--CCCCCCc--chHHHHHHHHHHcCCC-CCCEEEeC-CHHHHHHHHHHHhcCC-CCEEEE
Q 014594          104 ENPYGPPPE-VREALGQLKF--PYIYPDP--ESRRLRAALAKDSGLE-SDHILVGC-GADELIDLIMRCVLDP-GDKIVD  175 (422)
Q Consensus       104 ~~~~~~~~~-v~~al~~~~~--~~~y~~~--~~~~lr~~la~~~~~~-~~~i~~~~-G~~~al~~~~~~l~~~-gd~Vl~  175 (422)
                      ..|...+|. |++++.....  .++-+..  -..+.|+.++++++.+ +++|+++. |+|.+++.++..++++ ++.|+.
T Consensus        18 ~Gp~~~~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~   97 (378)
T PRK03080         18 SGPCKKRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA   97 (378)
T ss_pred             CCCcCCChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE
Confidence            345556677 9999876322  2333333  2678999999999984 45788875 8999999999999875 444444


Q ss_pred             cCCCchh-HHH-HHHHcCC-EEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcCCCeEEE
Q 014594          176 CPPTFTM-YEF-DAAVNGA-AVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVL  252 (422)
Q Consensus       176 ~~p~y~~-~~~-~~~~~g~-~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~~~~li~  252 (422)
                       .-.|+. +.. .++..|+ ++..++.+++..+|+++++      .++.|.++|.+|.||...|.+++.+ .+.|+++++
T Consensus        98 -~g~f~~~~~~~~~~~~g~~~v~~~~~~~g~~~d~~~i~------~~~~V~~~h~~t~tG~~~pi~~I~~-~~~g~~~vV  169 (378)
T PRK03080         98 -WESFGSKWATDVVKQLKLEDPRVLEADYGSLPDLSAVD------FDRDVVFTWNGTTTGVRVPVARWIG-ADREGLTIC  169 (378)
T ss_pred             -eCHHHHHHHHHHHhhcCCCCceEeccCCCCCCCHhhcC------CCCCEEEEecCCccceeccchhhcc-ccCCCeEEE
Confidence             456653 222 2356788 8888887667678877632      2567899999999999999999988 334999999


Q ss_pred             ccCCccccCCCchhhhhhcCCcEEEEccChhhhcc-ccccceeeecCHHHHHHHHHhc----------------------
Q 014594          253 DEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL-AGLRVGYGAFPLSIIEYLWRAK----------------------  309 (422)
Q Consensus       253 Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~r~G~i~~~~~~~~~l~~~~----------------------  309 (422)
                      |.+++.....-. ...     -++++.|..|.++. +|  +|+++++++.++++....                      
T Consensus       170 Da~qs~G~~pid-v~~-----iD~~~~s~~K~l~~P~G--~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  241 (378)
T PRK03080        170 DATSAAFALPLD-WSK-----LDVYTFSWQKVLGGEGG--HGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSF  241 (378)
T ss_pred             ecccccccCCCC-HHH-----CcEEEEehhhhCCCCCc--eEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhh
Confidence            999885432211 111     24888899998753 45  899999998887765311                      


Q ss_pred             C---CCCCcHHHHHHHHHHc---cCChHHH-HHHHHHHHHHHHHHHHccCCCCccc---CC--CceEEEEEeCC---CCC
Q 014594          310 Q---PYNVSVAAEVAACAAL---QNPIYLE-VKEALIKERERLFKLLKDVPFLNPY---PS--YSNFILCEVTS---GMD  374 (422)
Q Consensus       310 ~---~~~~~~~~~~aa~~~L---~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~---p~--~~~f~~~~~~~---~~~  374 (422)
                      .   +++++.....++.++|   .+...++ +.++.++..+++++.|++++++.+.   +.  .+..+.+++++   +. 
T Consensus       242 ~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~-  320 (378)
T PRK03080        242 KGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQAAV-  320 (378)
T ss_pred             cCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCchHHH-
Confidence            0   1223444443333343   3331345 8889999999999999998865433   11  22355667764   22 


Q ss_pred             HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          375 AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       375 ~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      ..++...|.++||.++.+......+.+|||+.   +.++++.+.++|+.
T Consensus       321 ~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~  369 (378)
T PRK03080        321 DAAAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDW  369 (378)
T ss_pred             HHHHHHHHHHcCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHH
Confidence            33466777777998887543223579999975   45677777777764

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=99.83  E-value=1.3e-18  Score=168.54  Aligned_cols=302  Identities=15%  Similarity=0.076  Sum_probs=199.5

Q ss_pred             CCCCCCCCHHHHHHHhcCC-----CC-------CCCCCc--chHHHHHHHHHHcCC-CCCCEEEeCC-HHHHHHHHHHHh
Q 014594          103 NENPYGPPPEVREALGQLK-----FP-------YIYPDP--ESRRLRAALAKDSGL-ESDHILVGCG-ADELIDLIMRCV  166 (422)
Q Consensus       103 ~~~~~~~~~~v~~al~~~~-----~~-------~~y~~~--~~~~lr~~la~~~~~-~~~~i~~~~G-~~~al~~~~~~l  166 (422)
                      +..|...|++|++++.+.-     .+       ++-+..  -..+.|+.++++++. ++++|++|+| +|++++.++..+
T Consensus         4 ~pGp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l   83 (355)
T cd00611           4 SAGPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNL   83 (355)
T ss_pred             CCCCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhc
Confidence            3456677899999987621     11       111111  256889999999997 5678999988 999999999999


Q ss_pred             cC---CCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCC-C-HHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594          167 LD---PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL-N-VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (422)
Q Consensus       167 ~~---~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~-d-~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~  241 (422)
                      +.   +||.|++ .+........++..|+++..++.+++... + ++..+..++ +++++|.++|.+|.||...+     
T Consensus        84 ~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~lV~~~h~~t~tG~~~~-----  156 (355)
T cd00611          84 LGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLA-PDAAYVHYCSNETIHGVEFD-----  156 (355)
T ss_pred             CCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCCCCCCCHhhcCCC-CCCCEEEEeCCcccccEEcc-----
Confidence            87   4444443 33223344467788999888886433222 4 233333444 78999999999999999843     


Q ss_pred             HHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh-------c----
Q 014594          242 KILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-------K----  309 (422)
Q Consensus       242 ~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~-------~----  309 (422)
                      ++++. |+++++|.+++.....-    .+...+  +.+.|..|.+|.+|  +|++++++++++++...       .    
T Consensus       157 ~i~~~~g~~~~VDa~qs~g~~~i----dv~~~~--~~~ss~~K~lGP~G--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~  228 (355)
T cd00611         157 EVPDTGGVPLVADMSSNILSRPI----DVSKFG--VIYAGAQKNLGPAG--VTVVIVRKDLLGKARKITPSMLNYKTHAD  228 (355)
T ss_pred             eecccCCCeEEEEccccccCCCC----CHHHhC--EEEeecccccCCCc--eEEEEECHHHHhhcccCCCCcccHHHHHh
Confidence            45554 99999999998543211    111222  45566799998777  79999999888764321       0    


Q ss_pred             ---CCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCc-c-cC--CCc-eEEEEEeCCCCCHHH
Q 014594          310 ---QPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLN-P-YP--SYS-NFILCEVTSGMDAKK  377 (422)
Q Consensus       310 ---~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~-~p--~~~-~f~~~~~~~~~~~~~  377 (422)
                         ..+++|.....++.++|+.   ...++ +.++.++..+++++.|++++++. . .+  ... ..+.+.+++....++
T Consensus       229 ~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~~l~~~  308 (355)
T cd00611         229 NNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKEELEKE  308 (355)
T ss_pred             cCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCChhhhHH
Confidence               1245666666666666553   31345 88999999999999999984432 1 11  122 335666653211255


Q ss_pred             HHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          378 LKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       378 ~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      +.+.+.++|+.+..+..  ..+.+|+|+.   +.+|+|+|.++|+.+
T Consensus       309 ~~~~~~r~G~~~~~~~~--~~g~vR~S~~~~nt~edi~~l~~al~~~  353 (355)
T cd00611         309 FLKEAEAAGMIGLKGHR--SVGGIRASIYNALSLEGVQALADFMKEF  353 (355)
T ss_pred             HHHHHHHCCCcccCCCc--ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence            55677789997444432  3478999975   577888888888875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=99.83  E-value=6e-18  Score=167.13  Aligned_cols=322  Identities=15%  Similarity=0.126  Sum_probs=201.0

Q ss_pred             CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHH
Q 014594           91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~-----~~y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~  160 (422)
                      +.+++.++|+..+..  .+ ..+|++.+++.+ +...     ..++.+...++-+.+++..+-. .+.+++++++++|++
T Consensus        36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e  115 (425)
T PRK07495         36 DKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVE  115 (425)
T ss_pred             eCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHH
Confidence            456788999987742  23 357888888876 3211     1234444567788888877532 268999999999999


Q ss_pred             HHHHHhc--CCCCEEEEcCCCchhHHHHHHH-cCC-------------EEEEecCCCC-CCCC----HHHHHHHhh----
Q 014594          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSD-FSLN----VELIADAVE----  215 (422)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~-~~~d----~~~l~~~i~----  215 (422)
                      .+++.-.  ....+|+....+|++....+.. .|.             .++.+|.+.. .+.+    ++.+++.+.    
T Consensus       116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~  195 (425)
T PRK07495        116 NAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVD  195 (425)
T ss_pred             HHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccC
Confidence            9998432  2236799888888765433221 111             1233332211 1222    445566653    


Q ss_pred             cCCCeEEEEeCCCCccCc-CCCHHHHHHHHcC----CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccc
Q 014594          216 REKPKCIFLTSPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGL  290 (422)
Q Consensus       216 ~~~~~~i~l~~p~NPtG~-~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~  290 (422)
                      .+++++|++.....-+|. ..+.+.+++|.+.    |+++|+||+|..|...+.. ......+....+.+|||.++ +|+
T Consensus       196 ~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~-~a~~~~gv~pDi~tlsK~l~-~G~  273 (425)
T PRK07495        196 PQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKL-FAMEHHEVAADLTTMAKGLA-GGF  273 (425)
T ss_pred             CCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCc-eeecccCCCCCEEeehhhhc-CCc
Confidence            246788888844433884 4677666666543    9999999999987654432 11222334455778999998 899


Q ss_pred             cceeeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHcc----CCCCcccCCC
Q 014594          291 RVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKD----VPFLNPYPSY  361 (422)
Q Consensus       291 r~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~  361 (422)
                      ++|++++++++.+.+...  ...|+.+++.++++.++|+   +++   ..++.++..+++.+.|++    ++.+.-....
T Consensus       274 pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~  350 (425)
T PRK07495        274 PLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEED---LCERANQLGNRLKQRLASLRETVPEIADIRGP  350 (425)
T ss_pred             cceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHhhCCCeeeeecC
Confidence            999999999998876532  2457789999987777664   233   334444445555444443    4433323456


Q ss_pred             ceEEEEEeCCCC----C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHh
Q 014594          362 SNFILCEVTSGM----D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLM  419 (422)
Q Consensus       362 ~~f~~~~~~~~~----~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~  419 (422)
                      |.++|+++.+..    +   ...+.+.+.++|+++.....  .++.+||.....-+.+++.++++
T Consensus       351 Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g~--~~~~~r~~Ppl~it~~~id~~~~  413 (425)
T PRK07495        351 GFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTCGV--HGNVIRFLAPITIQDDVFAEALD  413 (425)
T ss_pred             ceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeecCC--CCCEEEEeCCCccCHHHHHHHHH
Confidence            899999884321    1   34577778899999976432  24789999653222233444443

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=99.82  E-value=7e-18  Score=168.54  Aligned_cols=320  Identities=14%  Similarity=0.071  Sum_probs=210.5

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCc----c---hHH----HHHHHHHHcCCCCCCEEEe---CCHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDP----E---SRR----LRAALAKDSGLESDHILVG---CGADE  157 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~~----~---~~~----lr~~la~~~~~~~~~i~~~---~G~~~  157 (422)
                      .+.|+|-..+|..  +|.+++++.. +.  +..++|..    |   ...    .|+.++++++.+++++.++   +|+++
T Consensus        34 ~~~l~l~~sen~~--s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~  111 (452)
T PTZ00094         34 IEGLELIASENFT--SRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSP  111 (452)
T ss_pred             HcCeeEecccccC--CHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHH
Confidence            4569999999877  5788888876 22  21133311    1   122    4668899999988887677   78999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH----------cCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCC
Q 014594          158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----------NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP  227 (422)
Q Consensus       158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----------~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p  227 (422)
                      ++..++.+++++||+|++....|......+..          .+.+++.++.+.+..+|++++++.+++.+++++++.  
T Consensus       112 an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~--  189 (452)
T PTZ00094        112 ANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAG--  189 (452)
T ss_pred             HHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEe--
Confidence            99999999999999999987777544322210          112344455555578999999999975578877754  


Q ss_pred             CCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHH
Q 014594          228 NNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  306 (422)
Q Consensus       228 ~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~  306 (422)
                      ++.+|...|.+++.++++. |+++++|++|........... .+..+.++++.|++|.++  |-+.|++++++++.+.+.
T Consensus       190 ~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~-~~~~~~D~l~~S~hK~l~--GP~Gg~l~~~~~~~~~l~  266 (452)
T PTZ00094        190 ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLP-SPFPYADVVTTTTHKSLR--GPRSGLIFYRKKVKPDIE  266 (452)
T ss_pred             CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCC-CCCCCCcEEEcCCccCCC--CCCceEEEEecccchHHH
Confidence            3449999999999999987 999999999985432211111 011145588999999653  333588888766544332


Q ss_pred             Hhc----CCC---CCcHHHHHHHHHHccCC---hHHHHHHHHHHHHHHHHHHHccCCCCcccCC-CceEEEEEeC-CCCC
Q 014594          307 RAK----QPY---NVSVAAEVAACAALQNP---IYLEVKEALIKERERLFKLLKDVPFLNPYPS-YSNFILCEVT-SGMD  374 (422)
Q Consensus       307 ~~~----~~~---~~~~~~~~aa~~~L~~~---~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~-~~~f~~~~~~-~~~~  374 (422)
                      ...    .+.   +.+....+++.++++.-   ++.+.++++.++++++.+.|++.++....+. ....+.+.+. .+.+
T Consensus       267 ~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~~~~~~~~~~~v~~~~~~~~  346 (452)
T PTZ00094        267 NKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYDLVTGGTDNHLVLVDLRPFGIT  346 (452)
T ss_pred             HhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCCCceEeecCCcCCCC
Confidence            221    111   44555555555555532   2223778899999999999987653222221 1223444443 2567


Q ss_pred             HHHHHHHHHhCCcEEE-eCCC----CCCCCeEEEEec-------ChhhHHHHHHHHhhh
Q 014594          375 AKKLKDDLAKMGVMIR-HYNN----KELKGYVRVSVG-------KPEHTDALMECLMHL  421 (422)
Q Consensus       375 ~~~~~~~L~~~gI~v~-~~~~----~~~~~~iRis~~-------~~~~~~~l~~al~~l  421 (422)
                      ...+...|.++||.+. .+..    ...++++|+++.       +.++++++.++|+++
T Consensus       347 ~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~  405 (452)
T PTZ00094        347 GSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRA  405 (452)
T ss_pred             HHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHH
Confidence            8888888988999995 2221    123579999973       267788888887653

>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]

Probab=99.82  E-value=1.5e-18  Score=163.92  Aligned_cols=199  Identities=19%  Similarity=0.168  Sum_probs=157.4

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhcCC-C----C-CC-CC---CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQLK-F----P-YI-YP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~~-~----~-~~-y~---~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      .+.+.+.|+.+... +.++.|.+++.... .    . .. |.   ..+.++-|+.+|++.+.++.+|++|+|+|++++++
T Consensus        40 ~~~~~vyld~~at~-p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlv  118 (428)
T KOG1549|consen   40 HGTRPVYLDNQATG-PMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLV  118 (428)
T ss_pred             CCCccEEEecCcCC-CCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHH
Confidence            44567888876532 34688999987631 1    1 12 22   12367899999999999999999999999999999


Q ss_pred             HHHhc-CCCC----EEEEcCCCchhHHH---HHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594          163 MRCVL-DPGD----KIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (422)
Q Consensus       163 ~~~l~-~~gd----~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~  234 (422)
                      ++.+. ..+|    .|++..-.|.....   ..+..|.+++.+|.+++...|.+.+++.++ ++|+++.+.+.+|.+|++
T Consensus       119 l~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~-~~T~lv~I~~Vnn~~gv~  197 (428)
T KOG1549|consen  119 LKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIR-SKTRLVSIMHVNNEIGVL  197 (428)
T ss_pred             HHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcC-CCceEEEEEecccCcccc
Confidence            99873 3456    89988888864443   344479999999988888899999999998 799999999999999999


Q ss_pred             CCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCH
Q 014594          235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (422)
Q Consensus       235 ~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~  299 (422)
                      .|.+||.++++. ++.+++|.+++-    +...-.+.+-+.+++..|.+|.||.+|  +|++++++
T Consensus       198 ~Pv~EI~~icr~~~v~v~~DaAQav----G~i~vDV~eln~D~~s~s~HK~ygp~~--iGaLYvr~  257 (428)
T KOG1549|consen  198 QPVKEIVKICREEGVQVHVDAAQAV----GKIPVDVQELNADFLSISAHKIYGPPG--IGALYVRR  257 (428)
T ss_pred             ccHHHHHHHhCcCCcEEEeehhhhc----CCccccHHHcCchheeeecccccCCCc--ceEEEEcc
Confidence            999999999998 999999999983    223333334455677888999999999  99999876

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=99.82  E-value=2.8e-18  Score=166.11  Aligned_cols=303  Identities=15%  Similarity=0.080  Sum_probs=208.5

Q ss_pred             CCCCCCCCHHHHHHHhcCC------------CCCCCCCc--chHHHHHHHHHHcCCC-CCCEE-EeCCHHHHHHHHHHHh
Q 014594          103 NENPYGPPPEVREALGQLK------------FPYIYPDP--ESRRLRAALAKDSGLE-SDHIL-VGCGADELIDLIMRCV  166 (422)
Q Consensus       103 ~~~~~~~~~~v~~al~~~~------------~~~~y~~~--~~~~lr~~la~~~~~~-~~~i~-~~~G~~~al~~~~~~l  166 (422)
                      +..|...|++|++++....            .+++-++.  -..+.++.++++++.+ ..+++ ++++++.+++.++..+
T Consensus         8 ~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl   87 (360)
T PRK05355          8 SAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNL   87 (360)
T ss_pred             cCCCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhc
Confidence            3456667899999987631            11222222  2568999999999973 33454 5577899999999999


Q ss_pred             cCCCCEEEEcCCCch--hHHHHHHHcCCEEEEecCCC-CCCCCHHHHHH-HhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594          167 LDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKS-DFSLNVELIAD-AVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (422)
Q Consensus       167 ~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~-~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~  242 (422)
                      +.+||++++...+..  .+...++..|.. ..+..++ ....+..++++ .++ .++++|.++|..|.||...+  .+.+
T Consensus        88 ~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~-~~~~~V~~th~eTstGv~~~--~i~~  163 (360)
T PRK05355         88 LGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLS-DDAAYVHYTSNETIDGTEFH--ELPD  163 (360)
T ss_pred             CCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCCCCCCChhhccCC-CCCCEEEEccCCCcceEecC--cccc
Confidence            999998876665543  456677888865 5554332 22344444444 665 57999999999999999994  2334


Q ss_pred             HHcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh--------------
Q 014594          243 ILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA--------------  308 (422)
Q Consensus       243 i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~--------------  308 (422)
                      |  .|+++|+|.+.+.....- .   ++..+  +++.|..|.+|.+|  +|++++++++++++...              
T Consensus       164 i--~g~l~vVDavss~g~~~i-d---v~~~d--~~~~ssqK~lgP~G--lg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~  233 (360)
T PRK05355        164 T--GDVPLVADMSSDILSRPI-D---VSKFG--LIYAGAQKNIGPAG--LTIVIVREDLLGRALPSIPSMLDYKTHADND  233 (360)
T ss_pred             c--CCCcEEEEcCccccCccC-C---HHHcc--EEEEeccccccCCc--eEEEEECHHHHhhcccCCChHHHHHHHHhcC
Confidence            4  599999999988543211 1   12223  78888899998776  79999999888765431              


Q ss_pred             cCCCCCcHHHHHHHHHHccC--Ch-HHH-HHHHHHHHHHHHHHHHccCCCCccc-C--CCc-eEEEEEeCCCCCHHHHHH
Q 014594          309 KQPYNVSVAAEVAACAALQN--PI-YLE-VKEALIKERERLFKLLKDVPFLNPY-P--SYS-NFILCEVTSGMDAKKLKD  380 (422)
Q Consensus       309 ~~~~~~~~~~~~aa~~~L~~--~~-~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p--~~~-~f~~~~~~~~~~~~~~~~  380 (422)
                      ..++++|.....++.++|+.  .+ .++ +.++.++..+++++.|+++++.... +  ... .-+.+.+|++.+..++.+
T Consensus       234 ~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~  313 (360)
T PRK05355        234 SMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADEELDKKFLA  313 (360)
T ss_pred             CccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCChHHHHHHHH
Confidence            11356777777777766663  22 356 9999999999999999999854321 1  123 346677775544567777


Q ss_pred             HHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          381 DLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       381 ~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      .+.++|+.+..+..  ..+.+|+|+.   +.+|++.|.++|+.+
T Consensus       314 ~~~~~Gi~~~~~~~--~~g~vRiS~~~~nt~eei~~l~~~l~~~  355 (360)
T PRK05355        314 EAKAAGLVGLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEF  355 (360)
T ss_pred             HHHHCCCcccCCCC--ccCcEEEECCCCCCHHHHHHHHHHHHHH
Confidence            88889999855432  3478999975   467788888888764

>PLN02724 Molybdenum cofactor sulfurase

Probab=99.82  E-value=7.1e-18  Score=178.96  Aligned_cols=319  Identities=14%  Similarity=0.085  Sum_probs=210.7

Q ss_pred             eEEcCCCCCCCCCCHHHHHHHhcC-C--C--CC-CCCC-----cchHHHHHHHHHHcCCCCC--CEEEeCCHHHHHHHHH
Q 014594           97 IVKIDANENPYGPPPEVREALGQL-K--F--PY-IYPD-----PESRRLRAALAKDSGLESD--HILVGCGADELIDLIM  163 (422)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~-~--~--~~-~y~~-----~~~~~lr~~la~~~~~~~~--~i~~~~G~~~al~~~~  163 (422)
                      ++.|+.+.....++..+.+++.+. .  .  .+ .|..     .-..+.|+.+++++|++++  .|++|+|+|++++++.
T Consensus        35 ~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva  114 (805)
T PLN02724         35 VVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVG  114 (805)
T ss_pred             CEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHH
Confidence            689999876655555666665442 1  1  11 1211     1256899999999999765  4899999999999999


Q ss_pred             HHh-cCCCCEEEEcCCCchh---HHHHHHHcCCEEEEecCC--------CCCCCCH--HHHHHHhh---------cCCCe
Q 014594          164 RCV-LDPGDKIVDCPPTFTM---YEFDAAVNGAAVVKVPRK--------SDFSLNV--ELIADAVE---------REKPK  220 (422)
Q Consensus       164 ~~l-~~~gd~Vl~~~p~y~~---~~~~~~~~g~~~~~v~~~--------~~~~~d~--~~l~~~i~---------~~~~~  220 (422)
                      ..+ +++||+|++..-.|..   ....++..|+++..++.+        ....+++  +.+++.++         ..+++
T Consensus       115 ~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~  194 (805)
T PLN02724        115 ETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYN  194 (805)
T ss_pred             HHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcc
Confidence            987 6889999997766753   233445579999888854        2223333  55666531         14568


Q ss_pred             EEEEeCCCCccCcCCCHHHHHHHHcC---------CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcccccc
Q 014594          221 CIFLTSPNNPDGSIINDEDLLKILEM---------PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLR  291 (422)
Q Consensus       221 ~i~l~~p~NPtG~~~~~e~l~~i~~~---------~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r  291 (422)
                      +|.+++.+|.||.++|.+.+.++.+.         ++++++|.++....    ..-.+...+-++++.|+.|.+|.| ..
T Consensus       195 LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~----~piDv~~~~~Dfl~~S~HK~~GgP-~G  269 (805)
T PLN02724        195 LFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGT----SPPDLSRYPADFVVVSFYKIFGYP-TG  269 (805)
T ss_pred             eEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCC----CCCChhhcCCCEEEEecceeccCC-CC
Confidence            99999999999999999988766663         25799999987322    111223345568899999987722 23


Q ss_pred             ceeeecCHHHHHHHHHhc--------------------------CCCCCcHHHHHHHHHHccC---ChHHHHHHHHHHHH
Q 014594          292 VGYGAFPLSIIEYLWRAK--------------------------QPYNVSVAAEVAACAALQN---PIYLEVKEALIKER  342 (422)
Q Consensus       292 ~G~i~~~~~~~~~l~~~~--------------------------~~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~  342 (422)
                      +|++++++++.+.+....                          ...++|..+..++.++++.   -.+..+.++.++..
T Consensus       270 ~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~  349 (805)
T PLN02724        270 LGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALT  349 (805)
T ss_pred             ceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence            899999888776554211                          1124455555555555543   22222778889999


Q ss_pred             HHHHHHHccCC------CCcccCC---------CceEEEEEeCC----CCCHHHHHHHHHhCCcEEEeCCCC--------
Q 014594          343 ERLFKLLKDVP------FLNPYPS---------YSNFILCEVTS----GMDAKKLKDDLAKMGVMIRHYNNK--------  395 (422)
Q Consensus       343 ~~l~~~L~~~~------~~~~~p~---------~~~f~~~~~~~----~~~~~~~~~~L~~~gI~v~~~~~~--------  395 (422)
                      +++.+.|++++      .+.++..         .+..+.+.+..    .....++...+.++||.++.|...        
T Consensus       350 ~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~  429 (805)
T PLN02724        350 HYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFCNPGACAKY  429 (805)
T ss_pred             HHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccccCchHHHHH
Confidence            99999998875      3444421         23455555542    123444555455889999966541        


Q ss_pred             --------------------------C-CCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          396 --------------------------E-LKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       396 --------------------------~-~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                                                + ..+.+|+|++   +.+|+|.|.++|++
T Consensus       430 lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~  484 (805)
T PLN02724        430 LGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIIS  484 (805)
T ss_pred             cCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHH
Confidence                                      0 1288999986   56778888888875

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.81  E-value=1.5e-17  Score=164.98  Aligned_cols=321  Identities=14%  Similarity=0.175  Sum_probs=201.6

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCC---CC--CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKF---PY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~---~~--~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      +.+++.++|+..+.  ..+ ..+|++.+++.+ +..   ..  .|+.+...+|.+.|++..+...+.+++++++++|++.
T Consensus        38 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~  117 (423)
T PRK05964         38 LADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEV  117 (423)
T ss_pred             eCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence            34678899998773  333 357888888875 221   11  2444445678888888775334689999999999999


Q ss_pred             HHHHhcC-------CC-CEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCC--CCCCHHHHHHHhhc--
Q 014594          162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSD--FSLNVELIADAVER--  216 (422)
Q Consensus       162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~--~~~d~~~l~~~i~~--  216 (422)
                      +++....       +| .+|+....+|++....+.. .+-            .+..++...+  ...+++.+++.+.+  
T Consensus       118 A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~  197 (423)
T PRK05964        118 ALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHA  197 (423)
T ss_pred             HHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCC
Confidence            9995321       23 6799999989765443322 111            1122222111  01127888888853  


Q ss_pred             CCCeEEEEeC-CCCccCcCC-CHHHHHHH---HcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccc
Q 014594          217 EKPKCIFLTS-PNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGL  290 (422)
Q Consensus       217 ~~~~~i~l~~-p~NPtG~~~-~~e~l~~i---~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~  290 (422)
                      +++.+|++.. .++..|... +.+.+.+|   |+. |+++|+||+|.+|...+..... ...+...-+.+++|.++.+++
T Consensus       198 ~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~-~~~~v~pDi~~~~K~l~gG~~  276 (423)
T PRK05964        198 GEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFAC-EQAGVSPDIMCLSKGLTGGYL  276 (423)
T ss_pred             CcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHH-HhcCCCCCeeeeehhhhcCcc
Confidence            4566787775 577788777 55555554   554 9999999999887544422111 111211223467899974448


Q ss_pred             cceeeecCHHHHHHHHHh--------cCCCCCcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHccC---CCCc
Q 014594          291 RVGYGAFPLSIIEYLWRA--------KQPYNVSVAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKDV---PFLN  356 (422)
Q Consensus       291 r~G~i~~~~~~~~~l~~~--------~~~~~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~  356 (422)
                      ++|++++++++.+.+...        ..+|+.++++..++.++|+   .+++.   ++..+.-+++.+.|+++   +.+.
T Consensus       277 p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~---~~~~~~g~~l~~~l~~l~~~~~i~  353 (423)
T PRK05964        277 PLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVL---ERVAALSAGLAEGLEPFRDLPGVA  353 (423)
T ss_pred             cceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHhhccCCCeE
Confidence            999999999999887531        1235678888888888876   23444   44444455555555443   3332


Q ss_pred             ccCCCceEEEEEeCCCC---CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          357 PYPSYSNFILCEVTSGM---DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       357 ~~p~~~~f~~~~~~~~~---~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      .....|.++.+.+.+..   ....+.+.|.++||.+.+..     +.+||+..   +.+++|++.+++++
T Consensus       354 ~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~~-----~~lR~~p~l~~t~edId~~v~~l~~  418 (423)
T PRK05964        354 DVRVLGAIGAVELDRPVLERDGPALRAFALERGVLLRPLG-----NTIYLMPPYIITAEELDRITDAIVE  418 (423)
T ss_pred             EeecccEEEEEEeccCcchhHHHHHHHHHHHCCeEEEecC-----CEEEEeCCcccCHHHHHHHHHHHHH
Confidence            23456777778875322   25678888999999998753     58999965   45556666655543

>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]

Probab=99.81  E-value=9e-18  Score=149.21  Aligned_cols=310  Identities=19%  Similarity=0.201  Sum_probs=214.5

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcCCCC-CCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEE
Q 014594           96 DIVKIDANENPYGPPPEVREALGQLKFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI  173 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~-~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~V  173 (422)
                      ..+||-+. .-..|..+++++|.+...+ ..| .|+...+|++..|+.+| ++.-+++++|++..+-.++.-+-++|.+|
T Consensus        22 ~~vDLRSD-TvT~PTdeMr~am~eA~vgDdVyGeD~tt~rLE~~vA~l~G-KEAgLFv~SGTmgNllaIm~Hc~~rg~ei   99 (384)
T KOG1368|consen   22 RSVDLRSD-TVTVPTDEMRRAMAEASVGDDVYGEDPTTNRLEQRVAELFG-KEAGLFVPSGTMGNLLAIMVHCHQRGSEI   99 (384)
T ss_pred             eccccccc-cccCChHHHHHHHhhcccCcccccCCccHHHHHHHHHHHhC-ccceeeecccccccHHHHHHHhcCCCceE
Confidence            34666553 3334568899999885432 557 45678999999999999 44567777776665555554445599999


Q ss_pred             EEcCCCch-hHH--HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-------CCCeEEEEeCCCCccC-cCCCHHHHHH
Q 014594          174 VDCPPTFT-MYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-------EKPKCIFLTSPNNPDG-SIINDEDLLK  242 (422)
Q Consensus       174 l~~~p~y~-~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------~~~~~i~l~~p~NPtG-~~~~~e~l~~  242 (422)
                      ++-.-+|- .|+  .++...|+.+.++..+++..+|++++|+++..       +.+++|++.|-+|-+| .++|+|++.+
T Consensus       100 i~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~  179 (384)
T KOG1368|consen  100 IVGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDR  179 (384)
T ss_pred             EeccchheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHH
Confidence            99988773 343  34556899999999888889999999999863       3489999998877776 9999999888


Q ss_pred             HHcC----CCeEEEccCCccccC--CCchhhh-hhcCCcEEEEccChhhhcccccccee-eecCHHHHHHHHHhcCC---
Q 014594          243 ILEM----PILVVLDEAYTEFSG--LESRMEW-VKKHDNLIVLRTFSKRAGLAGLRVGY-GAFPLSIIEYLWRAKQP---  311 (422)
Q Consensus       243 i~~~----~~~li~Deay~~~~~--~~~~~~~-~~~~~~~i~~~S~SK~~~~~G~r~G~-i~~~~~~~~~l~~~~~~---  311 (422)
                      +..+    |+-+.+|.+-..-+.  .+-+... ....+.+  --.+||.+|.|   +|- ++++.+++++....+..   
T Consensus       180 v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSV--siCLSKglgAP---VGSViVG~k~FI~kA~~~RKalGG  254 (384)
T KOG1368|consen  180 VKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSV--SICLSKGLGAP---VGSVIVGSKDFIDKARHFRKALGG  254 (384)
T ss_pred             HHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhh--hhhhhccCCCC---cccEEEccHHHHHHHHHHHHHhcC
Confidence            7654    999999998764321  1111221 1112222  22478987744   675 45689999988766544   


Q ss_pred             -CCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcc--cCCCceEEEEEeC-CCCCHHHHHHHHHhCCc
Q 014594          312 -YNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNP--YPSYSNFILCEVT-SGMDAKKLKDDLAKMGV  387 (422)
Q Consensus       312 -~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~~f~~~~~~-~~~~~~~~~~~L~~~gI  387 (422)
                       +..+....+|+..+|++. |. ..+.-+++...+.+.++..+.+.+  ...+.|++.+.+. ...+++++++.+.++||
T Consensus       255 GmRQsGvLaaaaLval~~~-~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~~~~~~l~~~~~k~gi  332 (384)
T KOG1368|consen  255 GMRQSGVLAAAALVALDEN-VP-LLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQARLTAEELCKFLEKNGI  332 (384)
T ss_pred             chhHHHHHHHHHHHHhhcc-hH-HHHHHHHHHHHHHHHhccccceeeecchhhcceeeeecccccCCHHHHHHHHHHCCe
Confidence             334555666666666542 22 334455667777788877765543  3367888887664 36799999999999999


Q ss_pred             EEEeCCCCCCCCeEEEEec---ChhhHHHHHHHH
Q 014594          388 MIRHYNNKELKGYVRVSVG---KPEHTDALMECL  418 (422)
Q Consensus       388 ~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al  418 (422)
                      .+..+..    ..+||.+-   ++++.|.+..++
T Consensus       333 ~lm~~~s----~r~Rivlh~Qvt~~~ve~~~~~~  362 (384)
T KOG1368|consen  333 LLMGGAS----RRIRIVLHHQVTDEDVEYVKSVL  362 (384)
T ss_pred             EEeeccc----cceEEEEEEecCHHHHHHHHHHH
Confidence            9999873    55899985   455556666655

>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]

Probab=99.81  E-value=1.5e-17  Score=148.54  Aligned_cols=286  Identities=15%  Similarity=0.208  Sum_probs=205.0

Q ss_pred             CCCCC-CCcchHHHHHHHHHHc-C-----CCCCCE--EEeCCHHHHHHHHHHH---hcCCCCEEEEcCCCchhHHHHHHH
Q 014594          122 FPYIY-PDPESRRLRAALAKDS-G-----LESDHI--LVGCGADELIDLIMRC---VLDPGDKIVDCPPTFTMYEFDAAV  189 (422)
Q Consensus       122 ~~~~y-~~~~~~~lr~~la~~~-~-----~~~~~i--~~~~G~~~al~~~~~~---l~~~gd~Vl~~~p~y~~~~~~~~~  189 (422)
                      ..+.| |..|.+.++++.++.. |     +.++++  +-+-++|.|+.+....   ++. ...|.+++|+|.....+++.
T Consensus        66 ~NHEYLpi~Gl~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~-~~~VY~SnPTW~nH~~if~~  144 (410)
T KOG1412|consen   66 LNHEYLPILGLPTFTKAATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYN-KNTVYVSNPTWENHHAIFEK  144 (410)
T ss_pred             ccchhccccCchhhhhhhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcc-cceeEecCCchhHHHHHHHH
Confidence            44678 7789999999888874 3     234443  3344566666665553   344 46799999999999999999


Q ss_pred             cC-CEEEEec--CCCCCCCCHHHHHHHhhcCCCeEEEEe-C-CCCccCcCCCHHHHHHHHcC----CCeEEEccCCcccc
Q 014594          190 NG-AAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLT-S-PNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFS  260 (422)
Q Consensus       190 ~g-~~~~~v~--~~~~~~~d~~~l~~~i~~~~~~~i~l~-~-p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~  260 (422)
                      .| .++..++  ..++-.+|++.+...++....+.|++. . .+||||.-.+.|++.+|++.    +.+.+.|-+|.+|+
T Consensus       145 aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfA  224 (410)
T KOG1412|consen  145 AGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFA  224 (410)
T ss_pred             cCCceeeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccc
Confidence            99 4455555  234457999999999875444444444 3 38999999999999999985    89999999999998


Q ss_pred             CCCch-----hh-hhhcCCcEEEEccChhhhccccccceeeec---CHHHHHHH----HHhc--CCCCCcHHHHHHHHHH
Q 014594          261 GLESR-----ME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAF---PLSIIEYL----WRAK--QPYNVSVAAEVAACAA  325 (422)
Q Consensus       261 ~~~~~-----~~-~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~---~~~~~~~l----~~~~--~~~~~~~~~~~aa~~~  325 (422)
                      .++..     +. .+......+++.||+|.||+.+.|+|.+..   ++..+..+    ....  ...+++..+...+...
T Consensus       225 SGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kv  304 (410)
T KOG1412|consen  225 SGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKV  304 (410)
T ss_pred             cCCccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHH
Confidence            54321     12 233445589999999999999999997664   45544433    2222  2356777888999999


Q ss_pred             ccCC----hHHH----HHHHHHHHHHHHHHHHccCC----CCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCC
Q 014594          326 LQNP----IYLE----VKEALIKERERLFKLLKDVP----FLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYN  393 (422)
Q Consensus       326 L~~~----~~~~----~~~~~~~~~~~l~~~L~~~~----~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~  393 (422)
                      |+.+    +|.+    +..+++++|..|++.|..++    |.++..+.|+|-+-    |.+...+-....++.|++..-+
T Consensus       305 L~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyT----GLtp~qV~~li~~h~vyLl~~G  380 (410)
T KOG1412|consen  305 LSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYT----GLTPAQVDHLIENHKVYLLSDG  380 (410)
T ss_pred             hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeec----CCCHHHHHHHHHhceEEEecCC
Confidence            9975    4544    66789999999999998874    33456677888764    4466666555558899998766


Q ss_pred             CCCCCCeEEEEecC--hhhHHHHHHHHhh
Q 014594          394 NKELKGYVRVSVGK--PEHTDALMECLMH  420 (422)
Q Consensus       394 ~~~~~~~iRis~~~--~~~~~~l~~al~~  420 (422)
                              ||+++.  ....|.+.+++..
T Consensus       381 --------RInisGLN~~NveyVAkAIde  401 (410)
T KOG1412|consen  381 --------RINISGLNMKNVEYVAKAIDE  401 (410)
T ss_pred             --------cEeeeccccccHHHHHHHHHH
Confidence                    888863  4456777777654

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.81  E-value=4.5e-18  Score=164.52  Aligned_cols=277  Identities=22%  Similarity=0.256  Sum_probs=185.8

Q ss_pred             CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH----HcCCEEEEecCCC
Q 014594          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKS  201 (422)
Q Consensus       126 y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~  201 (422)
                      +.+|....|+++|+++.|.  +.++++++|+.|+..++.+++++||.|+++...|......++    ..|+++..++.  
T Consensus        52 ~gnPt~~~le~~la~Le~g--~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~--  127 (386)
T PF01053_consen   52 YGNPTVRALEQRLAALEGG--EDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP--  127 (386)
T ss_dssp             TC-HHHHHHHHHHHHHHT---SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST--
T ss_pred             cccccHHHHHHHHHHhhcc--cceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc--
Confidence            3556678899999999985  679999999999999999999999999999999976554443    47999988863  


Q ss_pred             CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-C-CeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-P-ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (422)
Q Consensus       202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~-~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~  279 (422)
                         -|+++++++++ +++++|++.+|.||+..+.+.+.+.++++. | +++|+|..+.....- .++    ..+.++++.
T Consensus       128 ---~d~~~l~~~l~-~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~-~pL----~~GaDivv~  198 (386)
T PF01053_consen  128 ---TDLEALEAALR-PNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYNQ-NPL----ELGADIVVH  198 (386)
T ss_dssp             ---TSHHHHHHHHC-TTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTTC--GG----GGT-SEEEE
T ss_pred             ---hhHHHHHhhcc-ccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceeee-ccC----cCCceEEEe
Confidence               47999999998 699999999999999999999999999997 7 999999999743221 111    234459999


Q ss_pred             cChhhhcccc-ccceeeecC--HHHHHHHHHhcCCC--CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594          280 TFSKRAGLAG-LRVGYGAFP--LSIIEYLWRAKQPY--NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP  353 (422)
Q Consensus       280 S~SK~~~~~G-~r~G~i~~~--~~~~~~l~~~~~~~--~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~  353 (422)
                      |.+|.++..| .=.|.++++  .++.+.++.....+  .+++.....+..-|+   -+. +.++..++...+.+.|++.+
T Consensus       199 S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~---Tl~~R~~~~~~nA~~lA~~L~~hp  275 (386)
T PF01053_consen  199 SATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLR---TLPLRMERQNENAEALAEFLEEHP  275 (386)
T ss_dssp             ETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHTST
T ss_pred             eccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCC---cHHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999775333 336777765  47777776554433  345555554444443   344 78888999999999999987


Q ss_pred             CCc-c-cC----------------CCceEEEEEeCCCC-CHHHHHHHHHhCCcEEEeCCC--------------------
Q 014594          354 FLN-P-YP----------------SYSNFILCEVTSGM-DAKKLKDDLAKMGVMIRHYNN--------------------  394 (422)
Q Consensus       354 ~~~-~-~p----------------~~~~f~~~~~~~~~-~~~~~~~~L~~~gI~v~~~~~--------------------  394 (422)
                      .+. + +|                ..+..+.+++.++. ....|.+.|.--++.+..|+.                    
T Consensus       276 ~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~  355 (386)
T PF01053_consen  276 KVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEER  355 (386)
T ss_dssp             TEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHH
T ss_pred             CCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhhhhHhhhhhcCCcccccccccchhhccCChhhh
Confidence            553 2 34                23457788886433 345555555311111111111                    


Q ss_pred             ---CCCCCeEEEEecChhhHHHHHHHHh
Q 014594          395 ---KELKGYVRVSVGKPEHTDALMECLM  419 (422)
Q Consensus       395 ---~~~~~~iRis~~~~~~~~~l~~al~  419 (422)
                         .-.++.||||++.+. .++|.+-|+
T Consensus       356 ~~~Gi~~~liRlSvGlEd-~~dLi~Dl~  382 (386)
T PF01053_consen  356 AEAGISDGLIRLSVGLED-PDDLIADLE  382 (386)
T ss_dssp             HHTTS-TTEEEEE--SS--HHHHHHHHH
T ss_pred             hccCCCCCeeEEEeccCC-HHHHHHHHH
Confidence               012478999999765 455555554

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]

Probab=99.80  E-value=3.1e-18  Score=154.95  Aligned_cols=330  Identities=18%  Similarity=0.245  Sum_probs=230.7

Q ss_pred             CCCchHHHHHHhCCCC-CCeEEcCCCCC--CCC---CCHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHHHc-C----
Q 014594           79 PILPFEVLSIQLGRKP-EDIVKIDANEN--PYG---PPPEVREALGQL---KFPYIY-PDPESRRLRAALAKDS-G----  143 (422)
Q Consensus        79 ~~~~~~~~~~~~~~~~-~~~i~l~~~~~--~~~---~~~~v~~al~~~---~~~~~y-~~~~~~~lr~~la~~~-~----  143 (422)
                      |.+++..+.+.+..++ ..-|+|+.|..  +.+   ..|.|++|-.++   .....| |..|..++.+..+++. |    
T Consensus        35 PpDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa~G~~s~  114 (427)
T KOG1411|consen   35 PPDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLALGDNSP  114 (427)
T ss_pred             CCCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHHHhhcCCch
Confidence            3445555666666543 34578877742  112   246777765542   222457 8889999999999985 3    


Q ss_pred             -CCCCCEEE--eCCHHHHHHHHHHHh--cCCCCEEEEcCCCchhHHHHHHHcCCEEEEec--CCCCCCCCHHHHHHHhhc
Q 014594          144 -LESDHILV--GCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVER  216 (422)
Q Consensus       144 -~~~~~i~~--~~G~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--~~~~~~~d~~~l~~~i~~  216 (422)
                       +..++|+.  |-++|.++.+....+  .-++..|.++.|+|.....+...+|..+..+.  .....++|.+.+.+.+.+
T Consensus       115 ~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~  194 (427)
T KOG1411|consen  115 VIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGE  194 (427)
T ss_pred             hhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhc
Confidence             23344433  334566665554422  34678899999999999999999999887776  345568999998888865


Q ss_pred             CCCeEEEEe--CCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc------hhhhhhcCCcEEEEccChhh
Q 014594          217 EKPKCIFLT--SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES------RMEWVKKHDNLIVLRTFSKR  284 (422)
Q Consensus       217 ~~~~~i~l~--~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~------~~~~~~~~~~~i~~~S~SK~  284 (422)
                      .....+++.  -.|||||+-.+.|++++|.+.    +.+-+.|.+|..|..+..      ....+.+..+++++.||+|.
T Consensus       195 ~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKN  274 (427)
T KOG1411|consen  195 APEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKN  274 (427)
T ss_pred             CCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhh
Confidence            444455555  458999999999999999875    899999999999985431      12334567788999999999


Q ss_pred             hccccccceeeec---CHHHHH----HHHHhcCC-C-CCcHHHHHHHHHHccCC----hHHH----HHHHHHHHHHHHHH
Q 014594          285 AGLAGLRVGYGAF---PLSIIE----YLWRAKQP-Y-NVSVAAEVAACAALQNP----IYLE----VKEALIKERERLFK  347 (422)
Q Consensus       285 ~~~~G~r~G~i~~---~~~~~~----~l~~~~~~-~-~~~~~~~~aa~~~L~~~----~~~~----~~~~~~~~~~~l~~  347 (422)
                      +|+.|.|+|.+.+   +.+...    +++...++ | +++.-+...+...|.+.    +|+.    +.+++...|+.|.+
T Consensus       275 MGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d  354 (427)
T KOG1411|consen  275 MGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFD  354 (427)
T ss_pred             cchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhH
Confidence            9999999998643   444443    34444444 3 45556777888888885    4544    88899999999999


Q ss_pred             HHccCC----CCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC--hhhHHHHHHHHhh
Q 014594          348 LLKDVP----FLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK--PEHTDALMECLMH  420 (422)
Q Consensus       348 ~L~~~~----~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~--~~~~~~l~~al~~  420 (422)
                      .|+..+    |..+..+-|+|.+-.+    +.+++-..-.++.|++..-+        |||++.  ....+.|.+++..
T Consensus       355 ~L~~~gs~~~W~hI~~QIGMF~fTgl----~peQv~~l~ke~~iYmT~dG--------RiS~aG~ss~nV~yLa~aih~  421 (427)
T KOG1411|consen  355 ALEKEGSPGNWSHITKQIGMFCFTGL----NPEQVDWLTKEYHIYLTKDG--------RISMAGLSSSNVPYLADAIHA  421 (427)
T ss_pred             HhhcCCCCccHHHHHHhhheeeecCC----CHHHHHHHHhhheeeeccCc--------eEeeccccccCCcccchhhHh
Confidence            998754    3336677888887544    56666555558899988654        888763  4445777777654

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=99.80  E-value=6.1e-17  Score=158.76  Aligned_cols=318  Identities=16%  Similarity=0.086  Sum_probs=206.8

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC---CCCCCCC------Ccc-hHH----HHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL---KFPYIYP------DPE-SRR----LRAALAKDSGLESDHILVGCGADELID  160 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~y~------~~~-~~~----lr~~la~~~~~~~~~i~~~~G~~~al~  160 (422)
                      .+.|.|-.+||-.  ++.+++++...   .+..+||      ... ..+    ..+...+.|+.+..+|-.-+|+. |+.
T Consensus        49 ~~~l~LiasEN~~--s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~-An~  125 (493)
T PRK13580         49 RSSLKLIASENYS--SLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEHAYVQPHSGAD-ANL  125 (493)
T ss_pred             hcCceEecccccC--CHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCcccccCCCcHH-HHH
Confidence            4558898888876  58888888752   2323332      222 222    34445566888777888877766 555


Q ss_pred             HHHHHhcCC-------------------------------CCEEEEcCCCchhHH---HHHHHcC--CEEEEecCC-CCC
Q 014594          161 LIMRCVLDP-------------------------------GDKIVDCPPTFTMYE---FDAAVNG--AAVVKVPRK-SDF  203 (422)
Q Consensus       161 ~~~~~l~~~-------------------------------gd~Vl~~~p~y~~~~---~~~~~~g--~~~~~v~~~-~~~  203 (422)
                      .++.++++|                               ||+|+..++..+.+.   ......|  .+.+.++.+ ++.
T Consensus       126 ~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g  205 (493)
T PRK13580        126 VAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTG  205 (493)
T ss_pred             HHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccC
Confidence            666668776                               799997766553221   1111122  344455544 346


Q ss_pred             CCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchh-hhh-hcCCcEEEEcc
Q 014594          204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRM-EWV-KKHDNLIVLRT  280 (422)
Q Consensus       204 ~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~-~~~-~~~~~~i~~~S  280 (422)
                      .+|++++++.+. .+++.|++++.+|- |...|.+++.+|++. |+++++|++|.......... ... ...+..++++|
T Consensus       206 ~iD~d~l~~~~~-~~~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT  283 (493)
T PRK13580        206 LLDYDEIAALAR-EFKPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTT  283 (493)
T ss_pred             ccCHHHHHHHHh-hcCCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeC
Confidence            799999999997 56777778888886 558899999999987 99999999998644322111 000 11245588999


Q ss_pred             ChhhhccccccceeeecCHHHHHHHHHhcCCC---CCcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHccCCC
Q 014594          281 FSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY---NVSVAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKDVPF  354 (422)
Q Consensus       281 ~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~---~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~~~~  354 (422)
                      ++|.+  .|-+.|++++++++++.+.... ++   +..+...+++..++.   .+++.+.++++.++.++|.+.|++.|+
T Consensus       284 ~hKaL--~GP~GG~I~~~~~l~~~L~~a~-P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~G~  360 (493)
T PRK13580        284 THKTL--RGPRGGLVLAKKEYADAVDKGC-PLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKRGA  360 (493)
T ss_pred             Chhhc--cCCCeEEEEecHHHHHHHhhCC-CcccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            99987  2344699999999999885443 32   222222222222332   234433788999999999999999886


Q ss_pred             Cccc-CCCceEEEEEeCCCC-CHHHHHHHHHhCCcEEEeCCCC---CC---CCeEEEEecC-------hhhHHHHHHHHh
Q 014594          355 LNPY-PSYSNFILCEVTSGM-DAKKLKDDLAKMGVMIRHYNNK---EL---KGYVRVSVGK-------PEHTDALMECLM  419 (422)
Q Consensus       355 ~~~~-p~~~~f~~~~~~~~~-~~~~~~~~L~~~gI~v~~~~~~---~~---~~~iRis~~~-------~~~~~~l~~al~  419 (422)
                      ..+. .+.+..+++.+.+.. ....+.+.|.+.||.+.....+   ..   ...|||+...       .++++++.+.|.
T Consensus       361 ~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~  440 (493)
T PRK13580        361 RLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIV  440 (493)
T ss_pred             CccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHH
Confidence            4432 345678888886322 2345667888999999754332   22   5789999753       566777777765


Q ss_pred             h
Q 014594          420 H  420 (422)
Q Consensus       420 ~  420 (422)
                      +
T Consensus       441 ~  441 (493)
T PRK13580        441 K  441 (493)
T ss_pred             H
Confidence            4

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=99.80  E-value=6.3e-17  Score=161.09  Aligned_cols=324  Identities=14%  Similarity=0.105  Sum_probs=197.5

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCCC--C---CCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFPY--I---YPDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~~--~---y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~  160 (422)
                      +.+++.+||+..+.  ..+ ..+|++.+++.+ +....  .   ++.+...++.+.|++.++.. .+.+++++++++|++
T Consensus        52 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e  131 (443)
T PRK06058         52 DVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTCFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVE  131 (443)
T ss_pred             eCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHH
Confidence            45678899998774  333 457888888876 32211  1   12233456777777776532 258999999999999


Q ss_pred             HHHHHh--cCCCCEEEEcCCCchhHHHHHHHc-CC-------------EEEEecCCCCCC------C--------CHHHH
Q 014594          161 LIMRCV--LDPGDKIVDCPPTFTMYEFDAAVN-GA-------------AVVKVPRKSDFS------L--------NVELI  210 (422)
Q Consensus       161 ~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~~------~--------d~~~l  210 (422)
                      .+++.-  ....++|+...++|++....+... +.             .+..++....+.      .        .++.+
T Consensus       132 ~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  211 (443)
T PRK06058        132 NAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVI  211 (443)
T ss_pred             HHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHH
Confidence            999932  122378999999998776544321 11             122222111111      0        12334


Q ss_pred             HHHhhcCCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChh
Q 014594          211 ADAVEREKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSK  283 (422)
Q Consensus       211 ~~~i~~~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK  283 (422)
                      ++.+..+++.+|++...+.-.|.+.+    .++++++|+. |+++|.||++..|...+...  ...+..++++   +++|
T Consensus       212 ~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv---~~gK  288 (443)
T PRK06058        212 EKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLI---TTAK  288 (443)
T ss_pred             HHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEE---EEcc
Confidence            44443356778876544433455543    4555666665 99999999999886444322  2222233333   4579


Q ss_pred             hhccccccceeeecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC----CCCcc
Q 014594          284 RAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV----PFLNP  357 (422)
Q Consensus       284 ~~~~~G~r~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~  357 (422)
                      .++ +|+++|++++++++++.+....  ..|+.|+++++++.++|+.-+-.+..++.+++.+++.+.|+++    +.+.-
T Consensus       289 ~l~-~G~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~  367 (443)
T PRK06058        289 GIA-GGLPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGD  367 (443)
T ss_pred             ccc-CCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEe
Confidence            998 8999999999999988775332  3578899999999999853111115566666677777777653    43222


Q ss_pred             cCCCceEEEEEeCCC---C-C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594          358 YPSYSNFILCEVTSG---M-D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       358 ~p~~~~f~~~~~~~~---~-~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  420 (422)
                      ....|.++.+.+...   . +   ...+.+.+.++||.+.++...  ++++|+......+.+++++++++
T Consensus       368 vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~lr~~Ppl~~t~~~i~~~~~~  435 (443)
T PRK06058        368 VRGRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCGTY--GNVIRLLPPLVIGDELLREGLDV  435 (443)
T ss_pred             eeccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccCCC--CCEEEEECCCccCHHHHHHHHHH
Confidence            356677776666321   1 1   345677778999999875422  47999986532223444444443

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.80  E-value=1.3e-17  Score=162.30  Aligned_cols=250  Identities=18%  Similarity=0.197  Sum_probs=177.7

Q ss_pred             cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCCCCC
Q 014594          129 PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLN  206 (422)
Q Consensus       129 ~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d  206 (422)
                      +...++++++++++|.  ++++.+++++.||.+++.++ +++||+|+++.-+|..........|++++.++.+ +++.+|
T Consensus        25 ~~~~~fE~~~a~~~g~--~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id  102 (363)
T PF01041_consen   25 PYVEEFEKEFAEYFGV--KYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAILWAGAEPVFVDIDPETLNID  102 (363)
T ss_dssp             HHHHHHHHHHHHHHTS--SEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-BETTTSSB-
T ss_pred             HHHHHHHHHHHHHhCC--CeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHHHhccEEEEEeccCCcCCcC
Confidence            4478999999999994  68999999999999999987 6799999999999999999999999999999976 789999


Q ss_pred             HHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCCchhhhhhcCCcEEEEccC--h
Q 014594          207 VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTF--S  282 (422)
Q Consensus       207 ~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~~~~~~~~~~~~~i~~~S~--S  282 (422)
                      ++.+++.++ +++|+|+++   +.-|...+.+++.++|+. |++||+|.+++... +.+...+..+    .+.+.||  +
T Consensus       103 ~~~~~~~i~-~~t~ai~~~---h~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~g----d~~~fSf~~~  174 (363)
T PF01041_consen  103 PEALEKAIT-PKTKAILVV---HLFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFG----DIAIFSFHPT  174 (363)
T ss_dssp             HHHHHHHHH-TTEEEEEEE----GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSS----SEEEEESSTT
T ss_pred             HHHHHHHhc-cCccEEEEe---cCCCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCC----CceEecCCCC
Confidence            999999998 789999955   457888999999999986 99999999998654 2333333322    2667777  6


Q ss_pred             hhhccccccceeeecC-HHHHHHHHHhcCC-------------------CCCcHHHHHHHHHHccCChHHH-HHHHHHHH
Q 014594          283 KRAGLAGLRVGYGAFP-LSIIEYLWRAKQP-------------------YNVSVAAEVAACAALQNPIYLE-VKEALIKE  341 (422)
Q Consensus       283 K~~~~~G~r~G~i~~~-~~~~~~l~~~~~~-------------------~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~  341 (422)
                      |.+. .| ..|+++++ +++.+++......                   +.++.+..+.+...|+.   ++ ..++-+++
T Consensus       175 K~i~-~g-eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~---L~~~~~~R~~~  249 (363)
T PF01041_consen  175 KIIT-TG-EGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKR---LDEIIARRREN  249 (363)
T ss_dssp             SSS--SS-S-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHT---HHHHHHHHHHH
T ss_pred             CCCc-CC-CCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHH---hhhhHHHHHHH
Confidence            8764 33 35888875 6677777654321                   23445555555555543   33 55666788


Q ss_pred             HHHHHHHHccCCCCcc--cCCCc----e-EEEEEeCCC--CCHHHHHHHHHhCCcEEEeCC
Q 014594          342 RERLFKLLKDVPFLNP--YPSYS----N-FILCEVTSG--MDAKKLKDDLAKMGVMIRHYN  393 (422)
Q Consensus       342 ~~~l~~~L~~~~~~~~--~p~~~----~-f~~~~~~~~--~~~~~~~~~L~~~gI~v~~~~  393 (422)
                      .+.+.+.|.+++.+..  .+.+.    . .+.+.+++.  .+.+++.+.|.++||.++...
T Consensus       250 a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~~~  310 (363)
T PF01041_consen  250 AQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELVEALRARGIETRPHY  310 (363)
T ss_dssp             HHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHHHHHHHTTBEEBCST
T ss_pred             HHHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHHHHHHHCCCcccccc
Confidence            8888899998876532  22221    2 234566543  368999999999999998655

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.80  E-value=4.9e-17  Score=155.45  Aligned_cols=243  Identities=21%  Similarity=0.208  Sum_probs=176.3

Q ss_pred             CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHH----HHHHHcCCEEEEecCCC
Q 014594          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKS  201 (422)
Q Consensus       126 y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~  201 (422)
                      +.+|....|+++++++-|  .++.+.+++++.|+..++..++++||.|+++...|....    ......|+++..++.  
T Consensus        60 ~~nPT~~~lE~~~a~LEg--~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~--  135 (396)
T COG0626          60 TGNPTRDALEEALAELEG--GEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDP--  135 (396)
T ss_pred             CCCccHHHHHHHHHHhhC--CCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECC--
Confidence            356667899999999987  468899999999999999999999999999999886433    334558999988873  


Q ss_pred             CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEcc
Q 014594          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT  280 (422)
Q Consensus       202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S  280 (422)
                         .|.+++++++.++++|+|++.+|.||+-.+.++..+.++++. |+++|+|..|..-.+.. ++    ..+.+|++.|
T Consensus       136 ---~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~-PL----~~GaDIVvhS  207 (396)
T COG0626         136 ---GDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQR-PL----ELGADIVVHS  207 (396)
T ss_pred             ---CChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccccC-hh----hcCCCEEEEe
Confidence               345677777764689999999999999999999999999998 89999999998433211 11    3445699999


Q ss_pred             Chhhhcccc-ccceeeecCH-HHHHHHHHhcC---CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC
Q 014594          281 FSKRAGLAG-LRVGYGAFPL-SIIEYLWRAKQ---PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF  354 (422)
Q Consensus       281 ~SK~~~~~G-~r~G~i~~~~-~~~~~l~~~~~---~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~  354 (422)
                      .+|.++.-+ +=.|.++++. ++.+.+.....   ...+++.....+..-|   +-+. +.++..++...+.+.|++.+.
T Consensus       208 aTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGl---kTL~~Rm~~~~~nA~~IA~~L~~~p~  284 (396)
T COG0626         208 ATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGL---RTLALRMERHNENALKIAEFLADHPK  284 (396)
T ss_pred             ccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhcc---chHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            999775332 3356666555 45555422222   2345666655444444   4455 778888999999999999776


Q ss_pred             Cc--ccCC----------------CceEEEEEeCCCCCHHHHHHHHH
Q 014594          355 LN--PYPS----------------YSNFILCEVTSGMDAKKLKDDLA  383 (422)
Q Consensus       355 ~~--~~p~----------------~~~f~~~~~~~~~~~~~~~~~L~  383 (422)
                      +.  .+|.                .|..+.+++.++.+..+|.+.|.
T Consensus       285 V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~L~  331 (396)
T COG0626         285 VKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSLK  331 (396)
T ss_pred             eEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHhCC
Confidence            54  3453                45667788864333445555554

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=99.80  E-value=2.2e-17  Score=159.01  Aligned_cols=272  Identities=13%  Similarity=0.048  Sum_probs=193.1

Q ss_pred             hHHHHHHHHHHcCCC-CCCEEEeCC-HHHHHHHHHHHhcCCCCEEEEcCCCch--hHHHHHHHcCCEEEEecCC----CC
Q 014594          131 SRRLRAALAKDSGLE-SDHILVGCG-ADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRK----SD  202 (422)
Q Consensus       131 ~~~lr~~la~~~~~~-~~~i~~~~G-~~~al~~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~----~~  202 (422)
                      ..++++.++++++.+ ..+|++++| +|.+++.++..++.+||++++...+..  .+...++..|+ +..+..+    ++
T Consensus        39 ~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~  117 (349)
T TIGR01364        39 ANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYT  117 (349)
T ss_pred             HHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCC
Confidence            457899999999973 346888877 999999999999999999877665553  55677888898 6666632    33


Q ss_pred             CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccC
Q 014594          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (422)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~  281 (422)
                      ..+|+++++.  . +++++|.++|..|.||...+     ++++. ++++++|.+.+.....- .   +++.+  +++.|.
T Consensus       118 ~~~~~~~~~~--~-~~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDavss~g~~~i-d---~~~~d--~~~~ss  183 (349)
T TIGR01364       118 KIPDPSTWEI--S-EDAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADMSSNILSRPI-D---VSKFG--LIYAGA  183 (349)
T ss_pred             CCCCHHhcCC--C-CCCCEEEEcCCCCcccEecc-----eecccCCCeEEEEccccccCccC-C---HHHcc--EEEEec
Confidence            3567776652  3 58999999999999999886     56655 89999999987433211 1   12233  888889


Q ss_pred             hhhhccccccceeeecCHHHHHHHHH-----------h--cC-CCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHH
Q 014594          282 SKRAGLAGLRVGYGAFPLSIIEYLWR-----------A--KQ-PYNVSVAAEVAACAALQN---PIYLE-VKEALIKERE  343 (422)
Q Consensus       282 SK~~~~~G~r~G~i~~~~~~~~~l~~-----------~--~~-~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~  343 (422)
                      .|.+|.+|  +|+++++++.++++..           .  .. +++++.....++.++|+.   .+.++ +.++.++..+
T Consensus       184 qK~lgP~G--lg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~  261 (349)
T TIGR01364       184 QKNIGPAG--LTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQ  261 (349)
T ss_pred             ccccCCCc--eEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence            99999777  7999999988875521           1  11 346677766666666653   31356 9999999999


Q ss_pred             HHHHHHccCCCCccc-C---CCc-eEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHH
Q 014594          344 RLFKLLKDVPFLNPY-P---SYS-NFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALM  415 (422)
Q Consensus       344 ~l~~~L~~~~~~~~~-p---~~~-~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~  415 (422)
                      ++++.|++++++... .   ..+ ..+.+.+++.....++...+.++|+.+..+..  ..+.+|+|+.   +.++++.|.
T Consensus       262 ~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~--~~g~vRvS~~~~nt~edid~l~  339 (349)
T TIGR01364       262 LLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEELEKRFLKEAEERGLVSLKGHR--SVGGMRASIYNAMPLEGVQALV  339 (349)
T ss_pred             HHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChhHhHHHHHHHHHCCCcccCCcc--ccCeeEEECcCCCCHHHHHHHH
Confidence            999999999644222 1   123 34556666321236666777889996666543  2468999975   467788888


Q ss_pred             HHHhhh
Q 014594          416 ECLMHL  421 (422)
Q Consensus       416 ~al~~l  421 (422)
                      ++|+.+
T Consensus       340 ~al~~~  345 (349)
T TIGR01364       340 DFMKEF  345 (349)
T ss_pred             HHHHHH
Confidence            888764

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=99.79  E-value=8.4e-17  Score=158.95  Aligned_cols=324  Identities=14%  Similarity=0.139  Sum_probs=207.1

Q ss_pred             CCCCCCeEEcCCC--CCCC-CCCHHHHHHHhc-CC---CCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           91 GRKPEDIVKIDAN--ENPY-GPPPEVREALGQ-LK---FPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~-~~~~~v~~al~~-~~---~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      +.+++.++|+..+  ...+ ..+|+|.+++.+ +.   ....| ..+...++.++|++...-..+.++++++++||++.+
T Consensus        71 D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~A  150 (442)
T TIGR03372        71 DTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAA  150 (442)
T ss_pred             ECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHH
Confidence            4567889999887  4444 357888888875 22   21222 344456788888877754446899999999999999


Q ss_pred             HHHhcC----CC-CEEEEcCCCchhHHHHHHHcCCE-EE---EecCCCCC----CCCHHHHHHHhhc-----CCCeEEEE
Q 014594          163 MRCVLD----PG-DKIVDCPPTFTMYEFDAAVNGAA-VV---KVPRKSDF----SLNVELIADAVER-----EKPKCIFL  224 (422)
Q Consensus       163 ~~~l~~----~g-d~Vl~~~p~y~~~~~~~~~~g~~-~~---~v~~~~~~----~~d~~~l~~~i~~-----~~~~~i~l  224 (422)
                      ++.-..    .| .+|+....+|++....+...... ..   ..|...+.    ..|.+.+++.+++     .++.+|++
T Consensus       151 lklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIv  230 (442)
T TIGR03372       151 LKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIIL  230 (442)
T ss_pred             HHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEE
Confidence            994321    23 67999999897655443322111 00   01111110    1256777776642     45778888


Q ss_pred             eCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhcccc-ccceeee
Q 014594          225 TSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGA  296 (422)
Q Consensus       225 ~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G-~r~G~i~  296 (422)
                      .......|...+    .+++.++|+. |+++|+||++..|...+..  ....+-.++++   +++|.+| .| +.+|.++
T Consensus       231 Epv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDiv---t~gK~lg-~G~~Pigavv  306 (442)
T TIGR03372       231 EPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDIL---CLAKALG-GGVMPIGATI  306 (442)
T ss_pred             eCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCee---eehhhhc-CCcccceEEE
Confidence            877777899888    6777788876 9999999999877543332  11222223333   4899998 78 6899999


Q ss_pred             cCHHHHHHHHH----hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CC-CCcccCCCceEEEE
Q 014594          297 FPLSIIEYLWR----AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VP-FLNPYPSYSNFILC  367 (422)
Q Consensus       297 ~~~~~~~~l~~----~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~-~~~~~p~~~~f~~~  367 (422)
                      +++++.+.+..    ...+|+.|+++.+++.+.|+.-+-.+..++.++.-+++.+.|++    ++ .+.-....|.++.+
T Consensus       307 ~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~gi  386 (442)
T TIGR03372       307 ATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAI  386 (442)
T ss_pred             ecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEE
Confidence            99998887742    12346678888888888875311101344445555555555544    44 22223567888889


Q ss_pred             EeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHHHHHHHHhh
Q 014594          368 EVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTDALMECLMH  420 (422)
Q Consensus       368 ~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~~l~~al~~  420 (422)
                      ++.+......+.+.|+++||++.....  ..+.+||....   .++.|++.+++++
T Consensus       387 el~~~~~~~~i~~~l~~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~~~~l~~  440 (442)
T TIGR03372       387 EFRDNEIGYAFAKELFQQNILVAGTLN--NAKSIRIEPPLTITIEQCALVIKAAKD  440 (442)
T ss_pred             EeCChHHHHHHHHHHHHCCcEEeecCC--CCCEEEEECCcccCHHHHHHHHHHHHH
Confidence            886433456788999999999976432  14789999763   4445555555543

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.79  E-value=4.6e-17  Score=160.60  Aligned_cols=214  Identities=14%  Similarity=0.086  Sum_probs=151.8

Q ss_pred             CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHH----HHHHHcCCEEEEecCCCC
Q 014594          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSD  202 (422)
Q Consensus       127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~  202 (422)
                      ..+....+++.++++.|. .+.|++ ++++.++.+++.+++++||+|+++...|....    ..+...|++++.++. . 
T Consensus        67 ~~pt~~~le~~la~l~g~-~~~v~f-sSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-~-  142 (437)
T PRK05613         67 TNPTVEALENRIASLEGG-VHAVAF-ASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVEN-P-  142 (437)
T ss_pred             cChHHHHHHHHHHHHhCC-CeEEEe-CCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECC-C-
Confidence            345578899999999996 344555 55558888888888999999999999997653    344668999999972 2 


Q ss_pred             CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccC
Q 014594          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (422)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~  281 (422)
                        .|++.++++++ +++++|+++++.||+|.+.+.+++.++++. |+++|+|.++..... ....    ..+.++++.|+
T Consensus       143 --~d~e~l~~~l~-~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~-~~p~----~~GaDivv~S~  214 (437)
T PRK05613        143 --DDPESWQAAVQ-PNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAAL-VRPL----ELGADVVVASL  214 (437)
T ss_pred             --CCHHHHHHhCC-ccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccc-cChH----HhCCCEEEeec
Confidence              28999999997 689999999999999999999999999987 999999999864321 1111    23456999999


Q ss_pred             hhhhcccccccee-eecCHHH-----------------------------------H-HHHHHhc--CCCCCcHHHHHHH
Q 014594          282 SKRAGLAGLRVGY-GAFPLSI-----------------------------------I-EYLWRAK--QPYNVSVAAEVAA  322 (422)
Q Consensus       282 SK~~~~~G~r~G~-i~~~~~~-----------------------------------~-~~l~~~~--~~~~~~~~~~~aa  322 (422)
                      +|.++..|--+|- ++.+.++                                   . +......  ....+++.....+
T Consensus       215 ~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~  294 (437)
T PRK05613        215 TKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVT  294 (437)
T ss_pred             cceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence            9987755544444 4433220                                   0 0010111  1234555555444


Q ss_pred             HHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594          323 CAALQNPIYLE-VKEALIKERERLFKLLKDVPFL  355 (422)
Q Consensus       323 ~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~  355 (422)
                      ...|   +-+. +.++..++...+.+.|++++.+
T Consensus       295 ~rgl---~TL~lR~~~~~~nA~~lA~~L~~hp~V  325 (437)
T PRK05613        295 AQGL---DTLSLRLERHNENAIKVAEFLNNHEKV  325 (437)
T ss_pred             Hccc---CcHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence            4333   3355 7788899999999999988754

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=99.79  E-value=1.3e-16  Score=154.61  Aligned_cols=299  Identities=14%  Similarity=0.113  Sum_probs=198.7

Q ss_pred             CCCCCCHHHHHHHhcCC-----CCCCCCCc--chHHHHHHHHHHcCCCC-CCEEEe-CCHHHHHHHHHHHhcCCCCEEEE
Q 014594          105 NPYGPPPEVREALGQLK-----FPYIYPDP--ESRRLRAALAKDSGLES-DHILVG-CGADELIDLIMRCVLDPGDKIVD  175 (422)
Q Consensus       105 ~~~~~~~~v~~al~~~~-----~~~~y~~~--~~~~lr~~la~~~~~~~-~~i~~~-~G~~~al~~~~~~l~~~gd~Vl~  175 (422)
                      .|...++++++++....     .+++-+..  -..+.|+.+++++++++ .+|+++ +|+|.+++.++..++.+ +.+++
T Consensus        10 GP~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i   88 (361)
T TIGR01366        10 GPSKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHL   88 (361)
T ss_pred             CCcCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEE
Confidence            45566899999987531     12333443  26789999999999854 478886 55999999999998743 34445


Q ss_pred             cCCCch-hHHHHHHH--cCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEE
Q 014594          176 CPPTFT-MYEFDAAV--NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVV  251 (422)
Q Consensus       176 ~~p~y~-~~~~~~~~--~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li  251 (422)
                      ....|. .+...+..  .+.++..++.+++..++.     .+. +++++|.++|.+|.||...|.+++   ++. |++++
T Consensus        89 ~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~i  159 (361)
T TIGR01366        89 SFGEFSSKFAKAVKLAPWLGEPIIVTADPGSAPEP-----QAD-PGVDVIAWAHNETSTGVAVPVRRP---EGSDDALVV  159 (361)
T ss_pred             ecCHHHHHHHHHHHhhhccCCceEEecCCCCCCCC-----ccC-CCCCEEEEcccCCccceecccccc---cccCCCeEE
Confidence            555564 44445554  233566666444433433     233 689999999999999999998877   454 99999


Q ss_pred             EccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh-----------------------
Q 014594          252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-----------------------  308 (422)
Q Consensus       252 ~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~-----------------------  308 (422)
                      +|.+.+.....-. +.   .  .++++.|-.|.+|.+| .++++++++++++++...                       
T Consensus       160 VDavqs~g~~~id-v~---~--~D~~~~s~~K~lg~~~-Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~  232 (361)
T TIGR01366       160 IDATSGAGGLPVD-IA---E--TDVYYFAPQKNFASDG-GLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKN  232 (361)
T ss_pred             EEcCccccCCCCC-HH---H--CCEEEEEchhhcCCCC-ceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccC
Confidence            9999885432111 11   1  3478889999998775 266667788877665421                       


Q ss_pred             cCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcccC-CC---c-eEEEEEeCCCCCHHHHH
Q 014594          309 KQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPYP-SY---S-NFILCEVTSGMDAKKLK  379 (422)
Q Consensus       309 ~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p-~~---~-~f~~~~~~~~~~~~~~~  379 (422)
                      ..+++++.....++.++++   ..+.++ +.+++++..+++++.|+++++..+.. ..   . ....+.++++.+.+++.
T Consensus       233 ~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g~~~~~v~  312 (361)
T TIGR01366       233 QTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDDIDAATVA  312 (361)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCccCHHHHH
Confidence            1123444443334444443   332245 77899999999999999988654331 11   1 11234556678999999


Q ss_pred             HHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          380 DDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       380 ~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      +.|.++||.+.++......+.+|||+.   +.+++++|.++++.
T Consensus       313 ~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~  356 (361)
T TIGR01366       313 KILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDW  356 (361)
T ss_pred             HHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHH
Confidence            999999999976543333578999975   56667777777765

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]

Probab=99.79  E-value=7.1e-17  Score=148.70  Aligned_cols=348  Identities=17%  Similarity=0.144  Sum_probs=233.3

Q ss_pred             CCCchHHHHHhhccCCCCCCCchHHH---HHHhC------CC-CCC-eEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCC
Q 014594           61 LTGDSFIRSHLRKLKPYQPILPFEVL---SIQLG------RK-PED-IVKIDANENPYGPPPEVREALGQ-LK-FPYIYP  127 (422)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------~~-~~~-~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~  127 (422)
                      .+.+.|+++.+.+-.....+..|..+   +..+.      .. ..+ -++.++..-....+|+|.+|+.+ ++ ++.+-+
T Consensus       127 F~Yd~ff~~~i~kKk~DhsYRvFk~vNRlA~~fP~A~~~se~t~k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAG  206 (570)
T KOG1360|consen  127 FDYDRFFREEIDKKKRDHSYRVFKNVNRLAKEFPLAHRYSEATEKKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAG  206 (570)
T ss_pred             ccHHHHHHHHHHhhhccchhHHHHHHhHhhhhccchhhccccccCceEEEecCccccccCChHHHHHHHHHHHHcCCCcC
Confidence            56777888877654443333333322   22221      11 011 24444444555778999999987 32 222211


Q ss_pred             -------Cc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh--cCCCCEEEEcCCCchhHHHHHHHcCCEEEEe
Q 014594          128 -------DP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKV  197 (422)
Q Consensus       128 -------~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v  197 (422)
                             .. -..+|++.||++.+- +..+++++.-- |.+..+..|  .-||=+|......+.......+..++.-+.+
T Consensus       207 GTRNIsG~s~~hv~LE~eLA~LHqK-~aALlFsSCfV-ANDstLftLak~lpgcei~SD~gNHASMI~GIrns~v~K~IF  284 (570)
T KOG1360|consen  207 GTRNISGHSKHHVRLEAELADLHQK-EAALLFSSCFV-ANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIF  284 (570)
T ss_pred             CccccCCCCchhhhHHHHHHHHhcC-cceeeeeeeee-ccchHHHHHHHHCCCcEEeccccchHHHHHHhhhcCCcceee
Confidence                   11 145899999999983 34455544322 333333333  2367777777778877777777777665554


Q ss_pred             cCCCCCCCCHHHHHHHhhc---CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhh---
Q 014594          198 PRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVK---  270 (422)
Q Consensus       198 ~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~---  270 (422)
                      .     .-|++.|++.+++   ..+|+|-+.+.+..+|.+.|+|||.++++. |.+..+||+++-..+++....-.+   
T Consensus       285 r-----HND~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdG  359 (570)
T KOG1360|consen  285 R-----HNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDG  359 (570)
T ss_pred             c-----cCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCC
Confidence            4     3478888887754   468999999999999999999999999998 999999999985444332211111   


Q ss_pred             -cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCC----CCcHHHHHHHHHHcc---CChHHHHHHHHHHHH
Q 014594          271 -KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY----NVSVAAEVAACAALQ---NPIYLEVKEALIKER  342 (422)
Q Consensus       271 -~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~----~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~  342 (422)
                       ....+|+.+++.|+||+-|   ||+.+...+++.++.+...|    ++++.....+.++++   ..+....++..+++.
T Consensus       360 vm~kvDiIsGTLgKafGcVG---GYIAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv  436 (570)
T KOG1360|consen  360 VMHKVDIISGTLGKAFGCVG---GYIAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNV  436 (570)
T ss_pred             cchhhhhcccchhhhccccc---ceehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHH
Confidence             2334588999999999988   99999999999998876652    456665555555544   344444777888899


Q ss_pred             HHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCC---CCCCCeEEEEecC---hhhHHHHH
Q 014594          343 ERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNN---KELKGYVRVSVGK---PEHTDALM  415 (422)
Q Consensus       343 ~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~~~~~---~~~~~~iRis~~~---~~~~~~l~  415 (422)
                      +++++.|.++| +.+.|..+..+.+++.+..-+.++.+.|. ++||+|-....   ..+...+||....   +.-++.|.
T Consensus       437 ~~~kq~l~~~G-iPVi~~pSHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv  515 (570)
T KOG1360|consen  437 KYVKQLLMELG-IPVIPNPSHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILV  515 (570)
T ss_pred             HHHHHHHHHcC-CcccCCCcceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHH
Confidence            99999999987 45667777888888865555677888887 89999987665   4567789999763   33344455


Q ss_pred             HHHh
Q 014594          416 ECLM  419 (422)
Q Consensus       416 ~al~  419 (422)
                      +++.
T Consensus       516 ~~l~  519 (570)
T KOG1360|consen  516 NALL  519 (570)
T ss_pred             HHHH
Confidence            5543

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=99.79  E-value=3.9e-18  Score=147.13  Aligned_cols=165  Identities=16%  Similarity=0.148  Sum_probs=133.8

Q ss_pred             hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHH-HHHHHcCCEEEEecCCCCCCCCH--
Q 014594          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE-FDAAVNGAAVVKVPRKSDFSLNV--  207 (422)
Q Consensus       131 ~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~-~~~~~~g~~~~~v~~~~~~~~d~--  207 (422)
                      ..++++.++++++.+.+++++++|+++++..+++++.+++++|+++.+.|+... ..+...|++++.++.+++...+.  
T Consensus         2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~   81 (170)
T cd01494           2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDV   81 (170)
T ss_pred             HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCccchhh
Confidence            367999999999766789999999999999999999888999999999998777 77788999999998655433333  


Q ss_pred             HHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhc
Q 014594          208 ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG  286 (422)
Q Consensus       208 ~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~  286 (422)
                      +.+++.....+++++++++++||+|...+.+++.++++. |+++|+|++|..+...... ......+.++++.|++|.++
T Consensus        82 ~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~~d~~~~s~~K~~~  160 (170)
T cd01494          82 AILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPG-VLIPEGGADVVTFSLHKNLG  160 (170)
T ss_pred             hhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccc-cccccccCCEEEEEcccccC
Confidence            356555545789999999999999999999999999987 9999999999987643321 11223456688899999887


Q ss_pred             cccccceeeecC
Q 014594          287 LAGLRVGYGAFP  298 (422)
Q Consensus       287 ~~G~r~G~i~~~  298 (422)
                      .  .++|+++++
T Consensus       161 ~--~~~G~l~~~  170 (170)
T cd01494         161 G--EGGGVVIVK  170 (170)
T ss_pred             C--CceEEEEeC
Confidence            4  679998863

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=99.78  E-value=1.2e-16  Score=157.48  Aligned_cols=321  Identities=14%  Similarity=0.175  Sum_probs=194.8

Q ss_pred             CCCCCCeEEcCCCCCC--C-CCCHHHHHHHhc-CC-CCCC----CCCcchHHHHHHHHHHcCCC---CCCEEE-eCCHHH
Q 014594           91 GRKPEDIVKIDANENP--Y-GPPPEVREALGQ-LK-FPYI----YPDPESRRLRAALAKDSGLE---SDHILV-GCGADE  157 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~~--~-~~~~~v~~al~~-~~-~~~~----y~~~~~~~lr~~la~~~~~~---~~~i~~-~~G~~~  157 (422)
                      +.+++.+||+..+...  + ..+|++.+++.+ +. ..+.    +......+|-++|++....+   .+.+++ ++++++
T Consensus        31 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGse  110 (412)
T TIGR02407        31 DEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTN  110 (412)
T ss_pred             eCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchH
Confidence            4567889999877432  3 457999998876 32 1111    11223345666666653211   125656 589999


Q ss_pred             HHHHHHHHhc--CCCCEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCCCC---CCHHHHHHHhhc---
Q 014594          158 LIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFS---LNVELIADAVER---  216 (422)
Q Consensus       158 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~---~d~~~l~~~i~~---  216 (422)
                      |++.+++...  ....+|+....+|++....+.. .|.            .+..+|.++...   -+++.+++.+.+   
T Consensus       111 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~  190 (412)
T TIGR02407       111 AVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSS  190 (412)
T ss_pred             HHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccC
Confidence            9999999532  2236799989999866544332 121            223333221111   246778887753   


Q ss_pred             --CCCeEEEEeCCCCccCc-CCCHHHHHHHHcC----CCeEEEccCCccccCCCchhh--hhhcCCcEEEEccChhhhcc
Q 014594          217 --EKPKCIFLTSPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGL  287 (422)
Q Consensus       217 --~~~~~i~l~~p~NPtG~-~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~~  287 (422)
                        +++.+|++....++.|. +.+.+.+++|.+.    |+++|+||++..|...+....  .....++   +.+++|.++.
T Consensus       191 ~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PD---i~~~~K~lg~  267 (412)
T TIGR02407       191 GVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPD---IVCLSKSISG  267 (412)
T ss_pred             CCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCC---EEEechhccC
Confidence              35678888888888998 4577766666543    999999999997754332211  1111223   2357899883


Q ss_pred             ccccceeeecCHHHHHHHHH--hcCCCCCcHHHHHHHHHHcc----CChHHHHHHHHHHHHHHHHHHHc----cCC-CCc
Q 014594          288 AGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQ----NPIYLEVKEALIKERERLFKLLK----DVP-FLN  356 (422)
Q Consensus       288 ~G~r~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~aa~~~L~----~~~~~~~~~~~~~~~~~l~~~L~----~~~-~~~  356 (422)
                      .|+|+|++++++++ +.+..  ....|+.++++..++.++|+    ++++.   ++.++..+++.+.|+    .++ ...
T Consensus       268 ~G~pigav~~~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~---~~~~~~g~~l~~~l~~l~~~~~~~~~  343 (412)
T TIGR02407       268 YGLPLALTLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFE---KAVQRKSEIIQERLDRIVAEYPELIK  343 (412)
T ss_pred             CccceeEEEEchhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHH---HHHHHHHHHHHHHHHHHHhhCCCceE
Confidence            39999999998886 44432  22346777876666555554    33333   333344444444333    344 222


Q ss_pred             ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594          357 PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       357 ~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  420 (422)
                      ..+..|.++|+++++......+.+.+.++||.+.+...  .++.+||+.....+.+++.++++.
T Consensus       344 ~vrg~Gl~~~l~l~~~~~~~~~~~~~~~~Gv~v~~~~~--~~~~lr~~p~l~~t~~~i~~~~~~  405 (412)
T TIGR02407       344 QVRGRGLMQGIECGDGDLAGKIAKAAFENGLIIETSGP--NDEVIKLLPPLTIDEETLQQGLDI  405 (412)
T ss_pred             eeecceeEEEEEecChHHHHHHHHHHHHCCCEEeccCC--CCCEEEEECCCCCCHHHHHHHHHH
Confidence            34577899999997544567888899999999987532  247899997743333445554444

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>PRK06541 hypothetical protein; Provisional

Probab=99.78  E-value=2.1e-16  Score=157.45  Aligned_cols=323  Identities=17%  Similarity=0.172  Sum_probs=204.2

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~-----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      ..+++.+||+..+.  ..+ ..+|++.+++.+ +...     ..|+.+...++.+.|++..+.+.+.+++++++++|++.
T Consensus        48 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~  127 (460)
T PRK06541         48 DDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLWSYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVES  127 (460)
T ss_pred             eCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHH
Confidence            34678899998773  333 357888888876 2211     12344445677788887765444699999999999999


Q ss_pred             HHHHhcC-------C-CCEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCC-----CCCC--------H
Q 014594          162 IMRCVLD-------P-GDKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSD-----FSLN--------V  207 (422)
Q Consensus       162 ~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~-----~~~d--------~  207 (422)
                      +++....       + ..+|+....+|++....+.. .|.            .+..+|.++.     ++-+        +
T Consensus       128 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (460)
T PRK06541        128 AWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAA  207 (460)
T ss_pred             HHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHH
Confidence            9884321       1 36788888888755443322 111            1223332211     1122        3


Q ss_pred             HHHHHHhhc---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEE
Q 014594          208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIV  277 (422)
Q Consensus       208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~  277 (422)
                      +.+++.+.+   .++.+|++...+++.|.+.+    .+++.++|+. |+++|+||+|..|...+...  ...+..++++ 
T Consensus       208 ~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDiv-  286 (460)
T PRK06541        208 DRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDII-  286 (460)
T ss_pred             HHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEE-
Confidence            667777752   34556665565899999988    6677777776 99999999998775333221  1122223333 


Q ss_pred             EccChhhhccccc-cceeeecCHHHHHHHHHhc------CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHc
Q 014594          278 LRTFSKRAGLAGL-RVGYGAFPLSIIEYLWRAK------QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLK  350 (422)
Q Consensus       278 ~~S~SK~~~~~G~-r~G~i~~~~~~~~~l~~~~------~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~  350 (422)
                        +++|.++ .|+ ++|++++++++++.+....      ..++.++++.+++.+.|+.-+..+..++++++.+++.+.|+
T Consensus       287 --t~gK~l~-~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~  363 (460)
T PRK06541        287 --TCAKGIT-SGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLE  363 (460)
T ss_pred             --Eeccccc-CCccceeEEEEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence              4899998 887 9999999999988775321      24667888888888887542111156777788888888877


Q ss_pred             cC---CCCcccCCCceEEEEEeCCC------CC-------H-HHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chhh
Q 014594          351 DV---PFLNPYPSYSNFILCEVTSG------MD-------A-KKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEH  410 (422)
Q Consensus       351 ~~---~~~~~~p~~~~f~~~~~~~~------~~-------~-~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~  410 (422)
                      ++   +.+......|.++.+++...      .+       . ..+.+.|.++||.+.+..  ...+.+||+..   +.++
T Consensus       364 ~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~g~~~lrl~Ppl~~t~~~  441 (460)
T PRK06541        364 KLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADD--RGDPVVQLAPPLISGQEE  441 (460)
T ss_pred             HhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecC--CCCCEEEEECCCCCCHHH
Confidence            65   22222446677777776321      00       0 246677889999998732  12478999976   3444


Q ss_pred             HHHHHHHHh
Q 014594          411 TDALMECLM  419 (422)
Q Consensus       411 ~~~l~~al~  419 (422)
                      ++++.++++
T Consensus       442 id~~~~~l~  450 (460)
T PRK06541        442 FDEIEQILR  450 (460)
T ss_pred             HHHHHHHHH
Confidence            554444443

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=99.78  E-value=1.9e-16  Score=152.60  Aligned_cols=292  Identities=14%  Similarity=0.067  Sum_probs=204.8

Q ss_pred             HHHHHhc--CCCCCCCCCcc--hHHHHHHHHHHcCCCCCC--EEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCch-hHH
Q 014594          113 VREALGQ--LKFPYIYPDPE--SRRLRAALAKDSGLESDH--ILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFT-MYE  184 (422)
Q Consensus       113 v~~al~~--~~~~~~y~~~~--~~~lr~~la~~~~~~~~~--i~~~~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~-~~~  184 (422)
                      ..+++.+  +..+|+-|...  ..++++.+.++++.+.+.  ++++.|++.++++++.+++ ++|++|++.. .|. .+.
T Consensus        19 ~~~~~~~~~~~~~HRs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~   97 (374)
T TIGR01365        19 SIEELKNAPLGRSHRSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWV   97 (374)
T ss_pred             hHHHHhhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHH
Confidence            6677765  33445545542  578899999999974332  6779999999999999998 5888888865 664 334


Q ss_pred             -HHHHHcCC-EEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcCCCeEEEccCCccccCC
Q 014594          185 -FDAAVNGA-AVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGL  262 (422)
Q Consensus       185 -~~~~~~g~-~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~~~~li~Deay~~~~~~  262 (422)
                       .+++..|+ ++..+..+++..+|+++++.  .    +.|+++|....||+..|.+++.+.. .+.++|+|.+-+..+. 
T Consensus        98 ~eia~~~g~~~v~~l~~~~g~~~~~~~ve~--~----~~v~~vhnETSTGv~npv~~i~~~~-~~~lliVDavSs~g~~-  169 (374)
T TIGR01365        98 TDVTKQLKLPDVRVLEAEYGKLPDLKKVDF--K----NDVVFTWNGTTSGVRVPNGDFIPAD-REGLTICDATSAAFAQ-  169 (374)
T ss_pred             HHHHHhcCCCCcEEEcCCCCCCCCHHHcCC--C----CCEEEecCCCchheecccccccccc-CCCcEEEEccchhcCC-
Confidence             78888999 47777777777899999973  1    2367899999999999986554322 3899999988664332 


Q ss_pred             CchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh-------------------------cCCCCCcHH
Q 014594          263 ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-------------------------KQPYNVSVA  317 (422)
Q Consensus       263 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~-------------------------~~~~~~~~~  317 (422)
                      +-...     +-++++.|-.|++++|+ .+++++++++.+++....                         ..+++++..
T Consensus       170 ~l~~d-----~iDv~~tgsQK~L~~pp-Gls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~  243 (374)
T TIGR01365       170 DLDYH-----KLDVVTFSWQKVLGGEG-AHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSML  243 (374)
T ss_pred             CCChh-----HCcEEEEechhccCCCC-ceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHH
Confidence            11111     24588889999998765 478888888887665421                         113455666


Q ss_pred             HHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC----Cce-EEEEEeCCC-C-----C-----HHH
Q 014594          318 AEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPS----YSN-FILCEVTSG-M-----D-----AKK  377 (422)
Q Consensus       318 ~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~----~~~-f~~~~~~~~-~-----~-----~~~  377 (422)
                      ...++..+|+   +.+.++ +.++++++.+.+++.++++|+....+.    .++ .+.+.++++ .     +     ..+
T Consensus       244 ~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~  323 (374)
T TIGR01365       244 CVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKE  323 (374)
T ss_pred             HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHH
Confidence            6677766664   333466 999999999999999999985554331    232 244566433 3     3     688


Q ss_pred             HHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHHHHHHHHh
Q 014594          378 LKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTDALMECLM  419 (422)
Q Consensus       378 ~~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~~l~~al~  419 (422)
                      +.+.|+++||.+.+|.....+..|||+...   .++++.|..+|+
T Consensus       324 ~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~  368 (374)
T TIGR01365       324 LISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLD  368 (374)
T ss_pred             HHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHH
Confidence            999999999999988765556899999654   444455554443

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=99.77  E-value=3.1e-16  Score=155.97  Aligned_cols=323  Identities=13%  Similarity=0.162  Sum_probs=208.0

Q ss_pred             CCCCCCeEEcCCC--CCCC-CCCHHHHHHHhc-CCC---C-CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           91 GRKPEDIVKIDAN--ENPY-GPPPEVREALGQ-LKF---P-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~-~~~~~v~~al~~-~~~---~-~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      +.+++.++|+..+  ...+ ..+|+|.+++.+ +..   . ..++.+...+|.++|++...-..+.+++++++++|++.+
T Consensus        78 D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~A  157 (459)
T PRK11522         78 DTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAA  157 (459)
T ss_pred             ECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHH
Confidence            3567889999887  3444 357889888876 321   1 123445566788888887754456899999999999999


Q ss_pred             HHHhc--C--CC-CEEEEcCCCchhHHHHHHH-cCCEEEE---ecCCCCC----CCCHHHHHHHhhc-----CCCeEEEE
Q 014594          163 MRCVL--D--PG-DKIVDCPPTFTMYEFDAAV-NGAAVVK---VPRKSDF----SLNVELIADAVER-----EKPKCIFL  224 (422)
Q Consensus       163 ~~~l~--~--~g-d~Vl~~~p~y~~~~~~~~~-~g~~~~~---v~~~~~~----~~d~~~l~~~i~~-----~~~~~i~l  224 (422)
                      ++.-.  .  +| .+|+....+|++....+.. .|-....   .|..+++    ..|.+.+++.+.+     .++.+|++
T Consensus       158 lklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIv  237 (459)
T PRK11522        158 LKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVIL  237 (459)
T ss_pred             HHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEE
Confidence            99432  1  22 4688888889866544332 2211111   1110110    1267888887752     35678888


Q ss_pred             eCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChhhhcccc-ccceeee
Q 014594          225 TSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAG-LRVGYGA  296 (422)
Q Consensus       225 ~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK~~~~~G-~r~G~i~  296 (422)
                      .......|.+.+    .+++.++|+. |+++|+||++..|...+...  ...+..++++   +++|.+| .| +.+|.++
T Consensus       238 Epv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDiv---t~gK~lg-gG~~Pigav~  313 (459)
T PRK11522        238 EPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDIL---CLAKALG-GGVMPIGATI  313 (459)
T ss_pred             ecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCCEE---Eechhhh-CCCccceeEE
Confidence            877888899887    6777778876 99999999998775433321  1122223333   6799998 67 6899999


Q ss_pred             cCHHHHHHHHH----hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC----C-CCcccCCCceEEEE
Q 014594          297 FPLSIIEYLWR----AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV----P-FLNPYPSYSNFILC  367 (422)
Q Consensus       297 ~~~~~~~~l~~----~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~-~~~~~p~~~~f~~~  367 (422)
                      +.+++.+.+..    ...+|+.++++.+++.+.|+.-+-.+..++.+++-+++.+.|+++    + .+.-....|.++.+
T Consensus       314 ~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~gi  393 (459)
T PRK11522        314 ATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAI  393 (459)
T ss_pred             EcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEE
Confidence            99998886642    123466688888888888764211124556666666666666553    3 22223456788888


Q ss_pred             EeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          368 EVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       368 ~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      ++.+......+.+.|.++||.+.+..  ...+.+|+.++   +.++++++.++++
T Consensus       394 el~~~~~~~~i~~~l~~~Gvl~~~~~--~~~~~lr~~Ppl~~t~~~id~~l~~l~  446 (459)
T PRK11522        394 EFVDNEIGYNFASEMFRQRVLVAGTL--NNAKTIRIEPPLTLTIEQCEQVLKAAR  446 (459)
T ss_pred             EecCchHHHHHHHHHHHCCeEEEecC--CCCCEEEEECCccCCHHHHHHHHHHHH
Confidence            88643335678888999999997643  12478999876   3445555555544

>PRK06434 cystathionine gamma-lyase; Validated

Probab=99.77  E-value=1.7e-16  Score=154.05  Aligned_cols=237  Identities=16%  Similarity=0.183  Sum_probs=164.1

Q ss_pred             CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch----hHHHHHHHcCCEEEEecCCCC
Q 014594          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSD  202 (422)
Q Consensus       127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~v~~~~~  202 (422)
                      .+|...+|++.++++.|.  +..+++++++.|+.+++.+++++||+|+++.+.|.    .+...+...|++++.++.++.
T Consensus        62 ~~P~~~~lE~~la~leg~--~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~  139 (384)
T PRK06434         62 GNPTVQAFEEKYAVLENA--EHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRL  139 (384)
T ss_pred             CChhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCCh
Confidence            455678999999999985  46788888899999999999999999999887664    333556678999999986432


Q ss_pred             CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccC
Q 014594          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (422)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~  281 (422)
                      ..++       +..+++++|++.+|.|||+.+.+.+++.++++. +  +++|.++.... ...++    ..+-++++.|.
T Consensus       140 ~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~-~~~pl----~~gaDivv~S~  205 (384)
T PRK06434        140 NSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPY-NQNPL----DLGADVVIHSA  205 (384)
T ss_pred             hhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcc-cCCch----hcCCCEEEeec
Confidence            1222       222478999999999999999999999999987 6  46799975221 11122    23455889999


Q ss_pred             hhhhcccc-ccceeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCc
Q 014594          282 SKRAGLAG-LRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLN  356 (422)
Q Consensus       282 SK~~~~~G-~r~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~  356 (422)
                      +|.++.+| .-.|.+++ ++++.++++.....  ...+++....+..-|   +.++ +.++.+++...+.+.|++++.+.
T Consensus       206 tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL---~tL~~R~~r~~~~a~~~a~~L~~~p~v~  282 (384)
T PRK06434        206 TKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGL---KTLGLRMEKHNKNGMELARFLRDSKKIS  282 (384)
T ss_pred             ccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCC---CcHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence            99886434 33577766 55666766654322  344554433333333   4455 77888999999999999987653


Q ss_pred             --ccCC----------CceEEEEEeCCCCCHHHHHHHH
Q 014594          357 --PYPS----------YSNFILCEVTSGMDAKKLKDDL  382 (422)
Q Consensus       357 --~~p~----------~~~f~~~~~~~~~~~~~~~~~L  382 (422)
                        .+|.          .|..+.+++.....+.+|.+.|
T Consensus       283 ~V~yPgl~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l  320 (384)
T PRK06434        283 NVYYPDTEIGKKVLRGFGGMLSFELRSMEDVHKFIRNL  320 (384)
T ss_pred             EEECCChHHHHHhcCCCCceEEEEECCHHHHHHHHHhC
Confidence              2443          3566778885222233444444

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=99.77  E-value=2.1e-16  Score=154.86  Aligned_cols=316  Identities=14%  Similarity=0.119  Sum_probs=197.3

Q ss_pred             CCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCC-CCCCCCcchHHHHHHHHHHcCC--CCCCEEEeCCHHHHHHHHHH
Q 014594           92 RKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKF-PYIYPDPESRRLRAALAKDSGL--ESDHILVGCGADELIDLIMR  164 (422)
Q Consensus        92 ~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~-~~~y~~~~~~~lr~~la~~~~~--~~~~i~~~~G~~~al~~~~~  164 (422)
                      .+++.++|+..+.  ..+ ..+|++.+++.+ +.. .+.+. ....+.+.++++.+.-  ..+.+++++++++|++.+++
T Consensus        33 ~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~-~~~~~~~~~la~~l~~~~~~~~v~f~~SGseA~e~Aik  111 (395)
T PRK03715         33 HNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSP-AFYNEPMAKLAGLLTQHSCFDKVFFANSGAEANEGAIK  111 (395)
T ss_pred             CCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccc-cccCHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHH
Confidence            3567899998752  223 247889888875 221 11111 1223445555555531  23689999999999999999


Q ss_pred             Hhc------CCC-CEEEEcCCCchhHHHHHHH-cCCEEEE---ecCCCCC----CCCHHHHHHHhhcCCCeEEEEeCCCC
Q 014594          165 CVL------DPG-DKIVDCPPTFTMYEFDAAV-NGAAVVK---VPRKSDF----SLNVELIADAVEREKPKCIFLTSPNN  229 (422)
Q Consensus       165 ~l~------~~g-d~Vl~~~p~y~~~~~~~~~-~g~~~~~---v~~~~~~----~~d~~~l~~~i~~~~~~~i~l~~p~N  229 (422)
                      ...      ++| .+|+.....|++....+.. .|.....   .|...++    ..|++.+++.+. +++++|+++..++
T Consensus       112 ~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~aavi~Epv~~  190 (395)
T PRK03715        112 LARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLIT-DKTVAVMLEPVQG  190 (395)
T ss_pred             HHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcC-CCceEEEEeCCcC
Confidence            663      123 5788888888765443332 3322111   1111111    247899999886 6788999888888


Q ss_pred             ccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChhhhccccccceeeecCHHHH
Q 014594          230 PDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII  302 (422)
Q Consensus       230 PtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~  302 (422)
                      ..|...+    .+++.++|+. |+++|+||+|..|...+...  ...+..++   +.+++|.++ .|+.+|.+++++++.
T Consensus       191 ~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PD---i~t~gK~lg-~G~p~~av~~~~~i~  266 (395)
T PRK03715        191 EGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPD---IMTLGKGIG-GGVPLAALLAKAEVA  266 (395)
T ss_pred             CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCc---eeeehhhhh-CCcceEEEEEccccc
Confidence            8888876    6777777776 99999999999875444321  22222222   346789998 679999999988875


Q ss_pred             HHHH-HhcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCcccCCCceEEEEEeCCCCCHHH
Q 014594          303 EYLW-RAKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPYPSYSNFILCEVTSGMDAKK  377 (422)
Q Consensus       303 ~~l~-~~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~f~~~~~~~~~~~~~  377 (422)
                      .... .....|+.++++.+++.+.|+.-+-.+..++.+++.+++.+.|++    .+ +......|.++.+++.+. ....
T Consensus       267 ~~~~~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-i~~vrG~Glm~~i~l~~~-~~~~  344 (395)
T PRK03715        267 VFEAGDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLELSEERG-LEGERGEGLLRALLLGKD-IGPQ  344 (395)
T ss_pred             cccCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcCC-cCeEEcceeEEEEEecCc-hHHH
Confidence            3211 112346778888888888775422111555666666666666654    34 222346678888888531 2345


Q ss_pred             HHHHHHhC---CcEEEeCCCCCCCCeEEEEecC---hhhHHHHHHHHh
Q 014594          378 LKDDLAKM---GVMIRHYNNKELKGYVRVSVGK---PEHTDALMECLM  419 (422)
Q Consensus       378 ~~~~L~~~---gI~v~~~~~~~~~~~iRis~~~---~~~~~~l~~al~  419 (422)
                      +.+.+.+.   ||.+....    .+.+||++..   .++++++.++++
T Consensus       345 ~~~~~~~~~~~Gi~~~~~~----~~~lR~~p~l~~t~~ei~~~~~~l~  388 (395)
T PRK03715        345 IVEKARDMQPDGLLLNAPR----PNLLRFMPALNVTTEEIDQMIAMLR  388 (395)
T ss_pred             HHHHHHhccCCCEEEeecC----CCEEEEeCCcccCHHHHHHHHHHHH
Confidence            66555555   99987543    3689999763   444454444443

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.77  E-value=1.8e-16  Score=167.72  Aligned_cols=321  Identities=13%  Similarity=0.085  Sum_probs=220.6

Q ss_pred             CCeEEcCCCCCCCCCCHHHH-HHHhcCCCCCCC-CCc---c----hHHHHHHHHHHcCCCCCCEEEeCCHH----HHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVR-EALGQLKFPYIY-PDP---E----SRRLRAALAKDSGLESDHILVGCGAD----ELIDL  161 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~-~al~~~~~~~~y-~~~---~----~~~lr~~la~~~~~~~~~i~~~~G~~----~al~~  161 (422)
                      ..+|.|++..+-+.+.-+.. ....++...|-| |..   |    ..++|+.+++++|.  +.|.++++++    +++.+
T Consensus       525 ~~~~plgsctmk~n~~~~~~~~~~~~~~~~hp~~p~~~~~g~~~~~~~~r~~la~i~g~--~~v~f~pnaga~ge~a~~~  602 (993)
T PLN02414        525 HSMIPLGSCTMKLNATTEMMPVTWPEFANIHPFAPVDQAQGYQEMFEDLGDLLCEITGF--DSFSLQPNAGAAGEYAGLM  602 (993)
T ss_pred             cCCccCcccccccCchhhhhhhcCcchhhcCCCCCHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEcCCCcHHHHHHHHH
Confidence            44577777776665322221 111122233445 432   3    34899999999997  7999999999    99999


Q ss_pred             HHHHhcCC-CC----EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCccCcC
Q 014594          162 IMRCVLDP-GD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSI  234 (422)
Q Consensus       162 ~~~~l~~~-gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~  234 (422)
                      +++.+.++ ||    .|+++...|......+...|.+++.++.+.+..+|+++|++++++  +++++|++++|+|-+|..
T Consensus       603 vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e  682 (993)
T PLN02414        603 VIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYE  682 (993)
T ss_pred             HHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCcccccc
Confidence            99999866 88    899999999888778888999999999877779999999999974  478999999999999999


Q ss_pred             CCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhc----cccccceeeecCHHHHHHHHHh-
Q 014594          235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG----LAGLRVGYGAFPLSIIEYLWRA-  308 (422)
Q Consensus       235 ~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~----~~G~r~G~i~~~~~~~~~l~~~-  308 (422)
                      .+.+++.++++. |+++++|.++.--..   ........+-++++.|..|.|+    ..|-.+|++.+.+++...+-.. 
T Consensus       683 ~~I~eI~~iah~~Galv~vDgAq~~a~~---~l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~  759 (993)
T PLN02414        683 EGIDEICDIIHDNGGQVYMDGANMNAQV---GLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHP  759 (993)
T ss_pred             chHHHHHHHHHHcCCEEEEEecCHHhcc---CcCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCc
Confidence            999999999987 999999999853111   1111224566789999999664    2344589998888776654321 


Q ss_pred             -----------cCC--CCCc------HHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceE--
Q 014594          309 -----------KQP--YNVS------VAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNF--  364 (422)
Q Consensus       309 -----------~~~--~~~~------~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f--  364 (422)
                                 ...  .+.+      .....++..++..  .+.+. ..+....+..++.+.|++.-.+......+.+  
T Consensus       760 v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~h  839 (993)
T PLN02414        760 VVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAH  839 (993)
T ss_pred             cccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeee
Confidence                       100  1211      1233334444433  23344 6777888899999999763222221112221  


Q ss_pred             -EEEEeC---C--CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          365 -ILCEVT---S--GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       365 -~~~~~~---~--~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                       ..+.++   +  +.+..++.++|.++||..-... +...+++||+..   +.+++|+|.+++..+
T Consensus       840 Efv~~~~~l~~~~g~~~~di~krL~d~Gihapt~~-~pv~~~lmiepTE~~skeelDrf~~al~~i  904 (993)
T PLN02414        840 EFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAPTMS-WPVPGTLMIEPTESESKAELDRFCDALISI  904 (993)
T ss_pred             eEEEeccccccccCCCHHHHHHHHHHcCcEEeeec-cccCCEEEEEeeeeCCHHHHHHHHHHHHHH
Confidence             123332   1  3677899999999999875533 334789999976   466778888887654

>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]

Probab=99.77  E-value=1.2e-16  Score=141.88  Aligned_cols=309  Identities=17%  Similarity=0.177  Sum_probs=208.3

Q ss_pred             CCeEEcCCCC-CCCCCCHHHHHHHhcC--CCCCC-----C--CCcc-hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           95 EDIVKIDANE-NPYGPPPEVREALGQL--KFPYI-----Y--PDPE-SRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        95 ~~~i~l~~~~-~~~~~~~~v~~al~~~--~~~~~-----y--~~~~-~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      ..+++|..|. -.+..+|++.++-.+.  .++.+     +  +... ...|+..||++.+-  ++.++.+.+-.|...++
T Consensus        67 k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~r--ED~ilypscfdANag~f  144 (417)
T KOG1359|consen   67 KKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGR--EDTILYPSCFDANAGAF  144 (417)
T ss_pred             cceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCC--CceEEeccccccchHHH
Confidence            4578887653 3456789988776552  12211     1  1222 46799999999983  45666677777888888


Q ss_pred             HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhh---cCCCeEEEEeCCCCccCcCCCHHHH
Q 014594          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDEDL  240 (422)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~~e~l  240 (422)
                      .+++.|.|.|+.....+.......+.+.         ...++|+-.++..+.   +.+-|+|+....-...|.+.|.++|
T Consensus       145 eail~pedAvfSDeLNhASIIdGirLck---------ry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~ei  215 (417)
T KOG1359|consen  145 EAILTPEDAVFSDELNHASIIDGIRLCK---------RYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLEEI  215 (417)
T ss_pred             HHhcChhhhhhccccccchhhhhhHHHh---------hhccchhHHHHHHHHHhhhheEEEEEecceeccCCCcccHHHH
Confidence            8899999999988888877666555443         122566666665443   2566777767888999999999999


Q ss_pred             HHHHcC-CCeEEEccCCccccCCCc---hhhhh-hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCC---
Q 014594          241 LKILEM-PILVVLDEAYTEFSGLES---RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY---  312 (422)
Q Consensus       241 ~~i~~~-~~~li~Deay~~~~~~~~---~~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~---  312 (422)
                      .+|++. |.++++||+|.-+..+..   ....+ .+.+.++..++++|++|  |.-.||..+|.++++.+++..++|   
T Consensus       216 ~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlG--ga~GGyttgp~~li~llrqr~RpylFS  293 (417)
T KOG1359|consen  216 SQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALG--GASGGYTTGPKPLISLLRQRSRPYLFS  293 (417)
T ss_pred             HHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhc--CCCCCCccCChhHHHHHHhcCCceeec
Confidence            999998 999999999986543221   12222 24566788899999976  444599999999999999888874   


Q ss_pred             -CCcHHHHHH---HHHHcc-CChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCc
Q 014594          313 -NVSVAAEVA---ACAALQ-NPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGV  387 (422)
Q Consensus       313 -~~~~~~~~a---a~~~L~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI  387 (422)
                       +.++.....   +..+|- ...   ...+.+.+.+++++..+.-|+ .+.....+...+-+.+..-+..+.++|+++||
T Consensus       294 nslppavV~~a~ka~dllm~s~~---~i~~~~a~~qrfr~~me~aGf-tIsg~~hPI~pv~lGda~lA~~~ad~lLk~Gi  369 (417)
T KOG1359|consen  294 NSLPPAVVGMAAKAYDLLMVSSK---EIQSRQANTQRFREFMEAAGF-TISGASHPICPVMLGDARLASKMADELLKRGI  369 (417)
T ss_pred             CCCChhhhhhhHHHHHHHHhhHH---HHHHHHHHHHHHHHHHHhcCc-eecCCCCCccceecccHHHHHHHHHHHHhcCc
Confidence             233322222   222222 112   344556667777777776664 33333345555556444456788899999999


Q ss_pred             EEEeCCC---CCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          388 MIRHYNN---KELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       388 ~v~~~~~---~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      .|..+++   +.+...||+.++   +++++|++.+|+-.
T Consensus       370 ~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~  408 (417)
T KOG1359|consen  370 YVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSE  408 (417)
T ss_pred             eEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHH
Confidence            9998777   455668888886   45666777776643

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=99.76  E-value=9.4e-16  Score=152.47  Aligned_cols=321  Identities=16%  Similarity=0.149  Sum_probs=198.1

Q ss_pred             CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC----C-CCCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHH
Q 014594           91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP----Y-IYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~----~-~y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~  160 (422)
                      ..+++.++|+..+..  .+ ..+|++.+++.+ +...    . .++.+...+|.+.|++.++.. .+.|++++++++|++
T Consensus        38 D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e  117 (445)
T PRK08593         38 DVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDAND  117 (445)
T ss_pred             eCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHH
Confidence            346788999977632  33 357888888875 3211    1 134444567888888887533 258999999999999


Q ss_pred             HHHHHhc--CCCCEEEEcCCCchhHHHHHH-HcCC-------------EEEEecCCCCCC-----CC-------HHHHHH
Q 014594          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAA-VNGA-------------AVVKVPRKSDFS-----LN-------VELIAD  212 (422)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~-~~g~-------------~~~~v~~~~~~~-----~d-------~~~l~~  212 (422)
                      .+++...  ....+|+....+|++....+. ..+.             .++.+|.++.+.     .+       ++.+++
T Consensus       118 ~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  197 (445)
T PRK08593        118 GIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKE  197 (445)
T ss_pred             HHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHH
Confidence            9999431  123568888888876543332 1221             123333221111     11       244554


Q ss_pred             Hhh----cCCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccC
Q 014594          213 AVE----REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTF  281 (422)
Q Consensus       213 ~i~----~~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~  281 (422)
                      .+.    .+++.+|++....+..|.+.+    .+++.++|+. |+++|+||+|..|...+...  ...+..++   +.++
T Consensus       198 ~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pD---i~t~  274 (445)
T PRK08593        198 MFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPD---LMSF  274 (445)
T ss_pred             HHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCC---Eeee
Confidence            442    246888998888888898865    5555666665 99999999998875443321  12222233   3368


Q ss_pred             hhhhccccccceeeecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHc----cCCCC
Q 014594          282 SKRAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLK----DVPFL  355 (422)
Q Consensus       282 SK~~~~~G~r~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~  355 (422)
                      +|.++ .|+++|++++++++++.+....  ..++.++++.+++.+.|+.-+-.+..++.+++.+++.+.|+    +++.+
T Consensus       275 gK~l~-~G~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v  353 (445)
T PRK08593        275 GKSLA-GGMPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFV  353 (445)
T ss_pred             ccccc-CCcccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCcE
Confidence            99998 7899999999999998875322  24667888888888777531111133444444444444444    35544


Q ss_pred             cccCCCceEEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          356 NPYPSYSNFILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       356 ~~~p~~~~f~~~~~~~~--------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      .-....|.++.+.+...        .....+...|.++||.+.+..    .+.+|+...   +.++++++.++++
T Consensus       354 ~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~  424 (445)
T PRK08593        354 GDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAVA----GNVLRFQPPLVITYEQLDTALNTIE  424 (445)
T ss_pred             EEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEeccC----CCEEEEECCCccCHHHHHHHHHHHH
Confidence            33456666766666321        113567788889999997642    368999876   3445555555544

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=99.76  E-value=7.3e-16  Score=152.77  Aligned_cols=323  Identities=15%  Similarity=0.154  Sum_probs=195.9

Q ss_pred             CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CC-CCC----CCCCcchHHHHHHHHHHcCCC--CC-CEEE-eCCHHH
Q 014594           91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LK-FPY----IYPDPESRRLRAALAKDSGLE--SD-HILV-GCGADE  157 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~-~~~----~y~~~~~~~lr~~la~~~~~~--~~-~i~~-~~G~~~  157 (422)
                      +.+++.+||+..+..  .+ ..+|++.+++.+ +. ..+    .++.+...+|-+++++.+..+  .+ .+++ ++++++
T Consensus        35 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGse  114 (425)
T PRK09264         35 DEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTN  114 (425)
T ss_pred             eCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHH
Confidence            456788999987742  23 357889888876 22 111    122333456777777754211  22 5666 589999


Q ss_pred             HHHHHHHHhc--CCCCEEEEcCCCchhHHHHHHHc-C---------C---EEEEecCCCCC---CCCHHHHHHHhhc---
Q 014594          158 LIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVN-G---------A---AVVKVPRKSDF---SLNVELIADAVER---  216 (422)
Q Consensus       158 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g---------~---~~~~v~~~~~~---~~d~~~l~~~i~~---  216 (422)
                      |++.+++...  ....+|+....+|++....+... |         .   .+..+|.+..+   .-|++.+++.+.+   
T Consensus       115 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~  194 (425)
T PRK09264        115 AVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSS  194 (425)
T ss_pred             HHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccC
Confidence            9999999532  22367888888897654433221 1         0   23334432111   1267888888753   


Q ss_pred             --CCCeEEEEeCCCCccCcC-CCHHHHHHHH---cC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChhhhcc
Q 014594          217 --EKPKCIFLTSPNNPDGSI-INDEDLLKIL---EM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGL  287 (422)
Q Consensus       217 --~~~~~i~l~~p~NPtG~~-~~~e~l~~i~---~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK~~~~  287 (422)
                        +++.+|++.......|.+ ++.+.+++|.   +. |+++|+||+|..|...+...  ...+..+++   .+++|.++.
T Consensus       195 ~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi---~t~~K~l~~  271 (425)
T PRK09264        195 GVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDI---VTLSKSISG  271 (425)
T ss_pred             CCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCCE---EEeccccCC
Confidence              246788888777777864 5565555554   44 99999999999876444322  111222332   367899985


Q ss_pred             ccccceeeecCHHHHHHHHH--hcCCCCCcHHHHHHHHHHccCChHHH--HHHHHHHHHHHHHHHHcc----CCCC-ccc
Q 014594          288 AGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLE--VKEALIKERERLFKLLKD----VPFL-NPY  358 (422)
Q Consensus       288 ~G~r~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~aa~~~L~~~~~~~--~~~~~~~~~~~l~~~L~~----~~~~-~~~  358 (422)
                      .|+++|++++++++ ..+..  ....|+.++++..++.++|++- +.+  ..++++++.+++.+.|++    .+.+ ...
T Consensus       272 ~G~pigav~~~~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~-~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~v  349 (425)
T PRK09264        272 YGLPMALVLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEEY-WSDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEV  349 (425)
T ss_pred             CccceEEEEEchhh-hccCCCccCCCCCCCHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHHHHHhCCCceecc
Confidence            59999999999886 33322  1234667777777776777321 111  455555666666655544    3322 223


Q ss_pred             CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594          359 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       359 p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  420 (422)
                      +..|.++++.+++......+.+.+.++||.+.+...  ....||++.....+.+++.+++++
T Consensus       350 rg~Gl~~~i~l~~~~~~~~l~~~~~~~Gv~~~~~~~--~~~~lr~~p~l~~t~~ei~~~~~~  409 (425)
T PRK09264        350 RGRGMMQGIDFGDGELAGKIAAEAFENGLIIETSGP--EDEVVKLLPPLTIDEEELEEGLDI  409 (425)
T ss_pred             eecccEEEEEecChHHHHHHHHHHHHCCCEEeccCC--CCCEEEEeCCCCCCHHHHHHHHHH
Confidence            456788899997544566888889999999987542  236788886522223445544444

>PRK02769 histidine decarboxylase; Provisional

Probab=99.75  E-value=6.4e-16  Score=150.02  Aligned_cols=271  Identities=10%  Similarity=-0.016  Sum_probs=188.6

Q ss_pred             HHHHHHHHHHcCCCCCCE--EEeCCHHHHHHHHHHHh--cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCH
Q 014594          132 RRLRAALAKDSGLESDHI--LVGCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV  207 (422)
Q Consensus       132 ~~lr~~la~~~~~~~~~i--~~~~G~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~  207 (422)
                      .++++.+++++|.+++++  ++|+|+|+++..++...  ..+++.|++++-.|......++..|.+.+.++.++++.+|+
T Consensus        68 ~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~g~id~  147 (380)
T PRK02769         68 RDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSLPNGEIDY  147 (380)
T ss_pred             HHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccCCCCcCcH
Confidence            467888899999876665  88999999987665533  25678999999999999899998999888888766778999


Q ss_pred             HHHHHHhhcC--CCeEEEEeCCCCccCcCCCHHHHHHHHcC-C---CeEEEccCCccccCC---CchhhhhhcCCcEEEE
Q 014594          208 ELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEM-P---ILVVLDEAYTEFSGL---ESRMEWVKKHDNLIVL  278 (422)
Q Consensus       208 ~~l~~~i~~~--~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~---~~li~Deay~~~~~~---~~~~~~~~~~~~~i~~  278 (422)
                      ++|++.+.+.  +|.+|+++.++|+||.+.|.+++.++++. |   +++++|.+|..+...   ....-.+.. +.+.+.
T Consensus       148 ~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~-~vDsis  226 (380)
T PRK02769        148 DDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFAD-GIDSIA  226 (380)
T ss_pred             HHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccC-CCCEEE
Confidence            9999999743  48899999999999999999999999987 6   699999999865421   000111111 345677


Q ss_pred             ccChhhhccccccceeeecCHHHHHHHHHhcC---------CCCCcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHH
Q 014594          279 RTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ---------PYNVSVAAEVAACAALQ---NPIYLEVKEALIKERERLF  346 (422)
Q Consensus       279 ~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~---------~~~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~  346 (422)
                      .|.+|.++ ....+|.++.+++..+.+.....         ..+.+.....++.++|+   ..++.+..++..+..+++.
T Consensus       227 ~s~HK~~~-~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~  305 (380)
T PRK02769        227 ISGHKFIG-SPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAV  305 (380)
T ss_pred             ECCcccCC-CCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Confidence            78999655 34568999998877665532111         12233333344444443   3444448888999999999


Q ss_pred             HHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHH
Q 014594          347 KLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL  418 (422)
Q Consensus       347 ~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al  418 (422)
                      +.|++.+......+..+.+.++.|.    +++.     +|..+....     +++||.+...-+.+.+++.+
T Consensus       306 ~~L~~~g~~~~~~p~~~~v~f~~~~----~~~~-----~~w~l~~~~-----~~~hi~~~~~~~~~~~~~f~  363 (380)
T PRK02769        306 DRLQANGIPAWRNPNSITVVFPCPS----ERIW-----KKWHLATSG-----NQAHIITMPHHNKQQIDSLI  363 (380)
T ss_pred             HHHHhCCCEEEcCCCceEEEEcCCC----HHHH-----hCeeEcccC-----CEEEEEECCCCCHHHHHHHH
Confidence            9998876544555667777766542    2221     455555432     58999987543333333333

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=99.75  E-value=3.3e-15  Score=144.56  Aligned_cols=314  Identities=13%  Similarity=0.127  Sum_probs=203.1

Q ss_pred             eEEcCCCCCCCCCCHHHHHH-HhcCCCC-CCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEE
Q 014594           97 IVKIDANENPYGPPPEVREA-LGQLKFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI  173 (422)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~a-l~~~~~~-~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~V  173 (422)
                      +|||-+..   ++ ..+.++ +..+..+ ..| .++...+|++++++++|.  ++++.+++++.|++++....++|||.|
T Consensus        40 ~iDLltDs---gT-~aMs~~q~a~~~~GDe~yag~~s~~~lE~~va~~~G~--~~av~v~sGT~Al~ll~~l~l~pGDeV  113 (450)
T TIGR02618        40 YIDLLTDS---GT-NAMSDKQWAGLMMGDEAYAGSRNFYHLERTVRELYGF--KYVVPTHQGRGAENLLSQIAIKPGDYV  113 (450)
T ss_pred             EEEcccCC---Cc-HHHHHHHHHHhhhcchhhcCCCcHHHHHHHHHHHHCC--CeEEEcCCHHHHHHHHHHhCCCCcCEE
Confidence            46664422   22 556665 5553322 347 667889999999999996  479999999999998887779999977


Q ss_pred             EEcCCCch-hHHHHHHHcCCEEEEecC----------CCCCCCCHHHHHHHhhcC---CCeEEEEeCCCCcc-CcCCCHH
Q 014594          174 VDCPPTFT-MYEFDAAVNGAAVVKVPR----------KSDFSLNVELIADAVERE---KPKCIFLTSPNNPD-GSIINDE  238 (422)
Q Consensus       174 l~~~p~y~-~~~~~~~~~g~~~~~v~~----------~~~~~~d~~~l~~~i~~~---~~~~i~l~~p~NPt-G~~~~~e  238 (422)
                        +.++|. .+....+..|+..+.++.          +.++.+|++++++.+++.   ++++|.+++++|-. |.+++.+
T Consensus       114 --psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~  191 (450)
T TIGR02618       114 --PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMA  191 (450)
T ss_pred             --CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHH
Confidence              667774 444446778987777743          235789999999999742   45578888888854 8998875


Q ss_pred             HHHH---HHcC-CCeEEEccCCcc----cc------CCCchh----hhhhcCCcEEEEccChhhhccccccceeee-cCH
Q 014594          239 DLLK---ILEM-PILVVLDEAYTE----FS------GLESRM----EWVKKHDNLIVLRTFSKRAGLAGLRVGYGA-FPL  299 (422)
Q Consensus       239 ~l~~---i~~~-~~~li~Deay~~----~~------~~~~~~----~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~-~~~  299 (422)
                      .+.+   +|+. |+.||+|.++..    |.      +.+..+    .....+-. .++.|..|.++.+-  .|+++ .++
T Consensus       192 ~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD-~~~~S~~Kd~~~~~--GG~l~~~d~  268 (450)
T TIGR02618       192 NMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYAD-GCTMSGKKDCLVNI--GGFLCMNDD  268 (450)
T ss_pred             HHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCc-EEEEeeccCCCCCC--ceEEEeCCH
Confidence            5555   4554 999999999864    21      111112    11112222 47778888876551  26666 478


Q ss_pred             HHHHHHHHhcCCC-------CCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeC--
Q 014594          300 SIIEYLWRAKQPY-------NVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT--  370 (422)
Q Consensus       300 ~~~~~l~~~~~~~-------~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~--  370 (422)
                      ++++++++....+       .++.-...++..+|.+.--....++-....++|.+.|.+.|.-.+.|.+|+-++++..  
T Consensus       269 ~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~~y~~~r~~~a~~La~~L~~~Gvpv~~p~ggh~V~vda~~~  348 (450)
T TIGR02618       269 EMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRF  348 (450)
T ss_pred             HHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcceEEEEhHHh
Confidence            8999888774332       2233344444444543110013333344578888888887643457888898888652  


Q ss_pred             ------CCCCHHHHHHHHH-hCCcEEEeCCC------C-C------CCCeEEEEec----ChhhHHHHHHHHhhh
Q 014594          371 ------SGMDAKKLKDDLA-KMGVMIRHYNN------K-E------LKGYVRVSVG----KPEHTDALMECLMHL  421 (422)
Q Consensus       371 ------~~~~~~~~~~~L~-~~gI~v~~~~~------~-~------~~~~iRis~~----~~~~~~~l~~al~~l  421 (422)
                            ....++.+...|. +.||.-.-.+.      + .      .-..+|+.+.    +..++|.+.+++..+
T Consensus       349 lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~  423 (450)
T TIGR02618       349 LPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKL  423 (450)
T ss_pred             CCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHH
Confidence                  1345778887776 78877653111      0 0      1257999976    456677777777654

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=99.75  E-value=1.2e-15  Score=150.10  Aligned_cols=310  Identities=17%  Similarity=0.108  Sum_probs=202.2

Q ss_pred             CCCHHHHHHHhc-CCCC----CCCCCc--chHHHHHHHHHHcCCC-C-CCEEE--eCCHHHHHHHHHHHhc--------C
Q 014594          108 GPPPEVREALGQ-LKFP----YIYPDP--ESRRLRAALAKDSGLE-S-DHILV--GCGADELIDLIMRCVL--------D  168 (422)
Q Consensus       108 ~~~~~v~~al~~-~~~~----~~y~~~--~~~~lr~~la~~~~~~-~-~~i~~--~~G~~~al~~~~~~l~--------~  168 (422)
                      ++.|++.+.+.. +...    ..+|..  -..+.++.+++++|++ + +++..  |+|+|+++.+++.+..        .
T Consensus        52 ~~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~  131 (431)
T TIGR01788        52 WMEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEA  131 (431)
T ss_pred             CCCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHh
Confidence            345667777655 2211    112221  1356788888999987 3 45654  8999999998876542        1


Q ss_pred             CC-----CEEEEcCCCchhHHHHHHHcCCEEEEecCCCC-CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594          169 PG-----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (422)
Q Consensus       169 ~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~  242 (422)
                      .|     ..|+++.-.|......++..|.++..+|.+.+ +.+|+++|++++. +++.+|+++..+|.||.+.|.+++.+
T Consensus       132 ~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~-~~t~lV~~t~g~t~tG~idpi~~I~~  210 (431)
T TIGR01788       132 AGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYVIDPEQVVEAVD-ENTIGVVCILGTTYTGEYEDVKALND  210 (431)
T ss_pred             cCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCCceeeCHHHHHHHHh-hCCeEEEEEeCCCCCcccCCHHHHHH
Confidence            12     36888999999999999889999999997654 5799999999997 67889999999999999999999999


Q ss_pred             HHcC-------CCeEEEccCCccccC---CCchhhhhhcCCcEEEEccChhhhccccccceeeecCHH--HHHHHHHh--
Q 014594          243 ILEM-------PILVVLDEAYTEFSG---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS--IIEYLWRA--  308 (422)
Q Consensus       243 i~~~-------~~~li~Deay~~~~~---~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~--~~~~l~~~--  308 (422)
                      +++.       ++++++|.+|..+..   .+.....+...+..-+..|.+|.+ .....+|+++.+++  +.+.+...  
T Consensus       211 i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~-~~P~g~G~l~~r~~~~l~~~~~~~~~  289 (431)
T TIGR01788       211 ALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYG-LVYPGVGWVIWRDEEALPEELIFHVN  289 (431)
T ss_pred             HHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhcc-CCCCCcEEEEEeChHHcchhheeccc
Confidence            9973       699999999995331   111111122233445777889953 33445898887543  22322110  


Q ss_pred             --cC-----CCCCcHHH-----HHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCccc-C-CCceEEEEEeCC---
Q 014594          309 --KQ-----PYNVSVAA-----EVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPY-P-SYSNFILCEVTS---  371 (422)
Q Consensus       309 --~~-----~~~~~~~~-----~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p-~~~~f~~~~~~~---  371 (422)
                        ..     ....+...     ..+....+....+.++.++..+..+++.+.|++.+.+.+. + ...+.+.+++.+   
T Consensus       290 yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~~  369 (431)
T TIGR01788       290 YLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDAD  369 (431)
T ss_pred             ccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCCC
Confidence              00     01111111     1111122222344447888889999999999998866543 3 355667777753   


Q ss_pred             -CCCHHHHHHHHHhCCcEEEeCCCC---CCCCeEEEEecC---hhhHHHHHHHHh
Q 014594          372 -GMDAKKLKDDLAKMGVMIRHYNNK---ELKGYVRVSVGK---PEHTDALMECLM  419 (422)
Q Consensus       372 -~~~~~~~~~~L~~~gI~v~~~~~~---~~~~~iRis~~~---~~~~~~l~~al~  419 (422)
                       +.+..++.+.|.++|+.+.....+   ...-++|+++..   ....++|.+.++
T Consensus       370 ~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~  424 (431)
T TIGR01788       370 PGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIE  424 (431)
T ss_pred             CCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHH
Confidence             356788999999999987544432   123478999852   333455555444

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=99.75  E-value=2e-15  Score=150.58  Aligned_cols=319  Identities=16%  Similarity=0.111  Sum_probs=199.3

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhc-C--CCCCCCC------Cc-chHHHHH----HHHHHcCCCCCCEEE---eCCHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQ-L--KFPYIYP------DP-ESRRLRA----ALAKDSGLESDHILV---GCGADE  157 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~--~~~~~y~------~~-~~~~lr~----~la~~~~~~~~~i~~---~~G~~~  157 (422)
                      .+.|.|-..||..  ++.+++++.. +  .++.+||      .. ...++++    ...+.|+.+.+.+++   ..+|+.
T Consensus        34 ~~~l~liasen~~--s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~  111 (475)
T PLN03226         34 WKGLELIASENFT--SRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSP  111 (475)
T ss_pred             HcCeeEecCCccC--CHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHH
Confidence            3458888888876  4778888765 2  3333332      11 2334443    344556766655544   366777


Q ss_pred             HHHHHHHHhcCCCCEEEEcCC---CchhHHHH---HHHcCCEEE----EecC-CCCCCCCHHHHHHHhhcCCCeEEEEeC
Q 014594          158 LIDLIMRCVLDPGDKIVDCPP---TFTMYEFD---AAVNGAAVV----KVPR-KSDFSLNVELIADAVEREKPKCIFLTS  226 (422)
Q Consensus       158 al~~~~~~l~~~gd~Vl~~~p---~y~~~~~~---~~~~g~~~~----~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~  226 (422)
                      |+..++.++++|||+|+..+.   .|......   .+..+....    .+.. .++..+|++++++.+.+.++++|++. 
T Consensus       112 AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~-  190 (475)
T PLN03226        112 ANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIAG-  190 (475)
T ss_pred             HHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEEe-
Confidence            888888899999999998442   33222211   111222211    2222 24567999999999876688877653 


Q ss_pred             CCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHH---
Q 014594          227 PNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII---  302 (422)
Q Consensus       227 p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~---  302 (422)
                      .++ +|...|.+++.+|++. |+++++|++|............. ....+++++|++|.+  .|-+.|+++++++.+   
T Consensus       191 ~S~-~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p-~~~~Div~~t~hK~L--~GP~Gg~I~~~~~~~~~~  266 (475)
T PLN03226        191 ASA-YPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASP-FEYCDVVTTTTHKSL--RGPRGGMIFFRKGPKPPK  266 (475)
T ss_pred             cCc-CCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCC-CCCCeEEEecCcccc--cCCCceEEEEchhhcccc
Confidence            333 8899999999999998 99999999998543221111110 113558899999986  334458888887544   


Q ss_pred             --------HH---HHHhcCC---CCCcHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHccCCCCcccC-CCceE
Q 014594          303 --------EY---LWRAKQP---YNVSVAAEVAACAALQN---PIYLEVKEALIKERERLFKLLKDVPFLNPYP-SYSNF  364 (422)
Q Consensus       303 --------~~---l~~~~~~---~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-~~~~f  364 (422)
                              +.   +.....+   .+++....+++.++|+.   .++.+.++++.++.++|.+.|.+.|+..+.+ .....
T Consensus       267 ~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~G~~l~~~~t~~hi  346 (475)
T PLN03226        267 GQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSKGYKLVTGGTDNHL  346 (475)
T ss_pred             cCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCCCCCE
Confidence                    22   1111111   23344444444444543   3443378889999999999999876433322 33566


Q ss_pred             EEEEe-CCCCCHHHHHHHHHhCCcEEEeCC----C-CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014594          365 ILCEV-TSGMDAKKLKDDLAKMGVMIRHYN----N-KELKGYVRVSVG-------KPEHTDALMECLMH  420 (422)
Q Consensus       365 ~~~~~-~~~~~~~~~~~~L~~~gI~v~~~~----~-~~~~~~iRis~~-------~~~~~~~l~~al~~  420 (422)
                      +++++ +.+.+..++.+.|.+.||.+..+.    . +..+..+|++..       .+++++++.+.|.+
T Consensus       347 ~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~  415 (475)
T PLN03226        347 VLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHR  415 (475)
T ss_pred             EEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHH
Confidence            77887 457788899999999999997543    1 223567999642       34556666666554

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=99.74  E-value=2.4e-15  Score=151.02  Aligned_cols=322  Identities=16%  Similarity=0.142  Sum_probs=200.4

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCC---C---CCCCcchHHHHHHHHHHcC-CCCCCEEEeCCHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFP---Y---IYPDPESRRLRAALAKDSG-LESDHILVGCGADELI  159 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~---~---~y~~~~~~~lr~~la~~~~-~~~~~i~~~~G~~~al  159 (422)
                      +.+++.+||+..+.  ..+ ..+|++.+++.+ +...   +   .++.+...+|.+.|.+.+. .+.+.++++++|++|+
T Consensus        85 D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~  164 (504)
T PLN02760         85 DINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEAN  164 (504)
T ss_pred             ECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHH
Confidence            45678899998863  233 457888888876 3221   1   1222334567777777653 3345799999999999


Q ss_pred             HHHHHHhc------C-CC-CEEEEcCCCchhHHHHHHH-cCCE------------EEEecCCCCCC-------------C
Q 014594          160 DLIMRCVL------D-PG-DKIVDCPPTFTMYEFDAAV-NGAA------------VVKVPRKSDFS-------------L  205 (422)
Q Consensus       160 ~~~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~~~-~g~~------------~~~v~~~~~~~-------------~  205 (422)
                      +.+++...      . ++ .+|+....+|++....+.. .|..            +..++.+..+.             .
T Consensus       165 e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  244 (504)
T PLN02760        165 DTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTR  244 (504)
T ss_pred             HHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHH
Confidence            99999552      1 23 5788888888765433322 2221            11222111111             0


Q ss_pred             CHHHHHHHhhc---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEE
Q 014594          206 NVELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIV  277 (422)
Q Consensus       206 d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~  277 (422)
                      ..+.+++.+..   .++.+|++.......|.+.+    .+++++||+. |+++|+||++..|...+.... ...++..--
T Consensus       245 ~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a-~e~~gv~PD  323 (504)
T PLN02760        245 LADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFG-CDKYNIKPD  323 (504)
T ss_pred             HHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhH-HHhcCCCCc
Confidence            12456666631   35778888877777899888    7888888887 999999999988854333221 111111112


Q ss_pred             EccChhhhcccc-ccceeeecCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHH
Q 014594          278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFK  347 (422)
Q Consensus       278 ~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~  347 (422)
                      +.+|+|.+| .| +.+|.+++++++.+.+...         ...|+.++++.+++.+.|+.-+-.+..++.+++.++|.+
T Consensus       324 ivtlgK~lg-gG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~  402 (504)
T PLN02760        324 LVSLAKALS-SAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQD  402 (504)
T ss_pred             EEEeccccc-CCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence            456799987 56 5899999999999887531         234778899998888888632110145555666666666


Q ss_pred             HHcc---CCCCcccCCCceEEEEEeCCCCC-----------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chhh
Q 014594          348 LLKD---VPFLNPYPSYSNFILCEVTSGMD-----------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEH  410 (422)
Q Consensus       348 ~L~~---~~~~~~~p~~~~f~~~~~~~~~~-----------~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~  410 (422)
                      .|++   .+.+.-....|.++.+++.+...           ...+.+.+.++||.+.+..     +.+||+..   +.++
T Consensus       403 ~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-----~~lrl~Ppl~it~ee  477 (504)
T PLN02760        403 GIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAG-----DNIMMSPPLIITPEE  477 (504)
T ss_pred             HHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEecC-----CEEEEECCCCCCHHH
Confidence            6554   33322234567777777742111           4457788889999998743     57899965   4455


Q ss_pred             HHHHHHHHh
Q 014594          411 TDALMECLM  419 (422)
Q Consensus       411 ~~~l~~al~  419 (422)
                      ++++.++++
T Consensus       478 id~~~~~l~  486 (504)
T PLN02760        478 VDELISIYG  486 (504)
T ss_pred             HHHHHHHHH
Confidence            555555554

>PLN03032 serine decarboxylase; Provisional

Probab=99.74  E-value=1.5e-15  Score=146.43  Aligned_cols=275  Identities=13%  Similarity=0.005  Sum_probs=189.9

Q ss_pred             hHHHHHHHHHHcCCCCCCE--EEeCCHHHHHHHHHHHhc--CCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCC
Q 014594          131 SRRLRAALAKDSGLESDHI--LVGCGADELIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN  206 (422)
Q Consensus       131 ~~~lr~~la~~~~~~~~~i--~~~~G~~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d  206 (422)
                      ..++++.+++++|.+++++  ++|+|+|+++..++....  .++..|+++.-.|......++..|.++..||.+.++.+|
T Consensus        68 e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id  147 (374)
T PLN03032         68 EVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPTLPSGEID  147 (374)
T ss_pred             HHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeeeCCCCcCc
Confidence            4578888899999988877  999999999988877543  245678889889988889999999998889988888999


Q ss_pred             HHHHHHHhhcC--CCeEEEEeCCCCccCcCCCHHHHHHHHcC-C-----CeEEEccCCccccC--CC-chhhhhhcCCcE
Q 014594          207 VELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEM-P-----ILVVLDEAYTEFSG--LE-SRMEWVKKHDNL  275 (422)
Q Consensus       207 ~~~l~~~i~~~--~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~-----~~li~Deay~~~~~--~~-~~~~~~~~~~~~  275 (422)
                      +++|++++.+.  ++.+++++..+|+||.+-|.+++.++++. |     +++++|.+|..+..  .. .....+ ..+.+
T Consensus       148 ~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~-~~~vD  226 (374)
T PLN03032        148 YDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTF-RKPIG  226 (374)
T ss_pred             HHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCC-CcCCc
Confidence            99999999742  57788888999999999999999999986 4     58999999975421  10 000011 11234


Q ss_pred             EEEccChhhhccccccceeeecCHHHHHHHHHhcCC---------CCCcHH---HHHHHHHHccCChHHHHHHHHHHHHH
Q 014594          276 IVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP---------YNVSVA---AEVAACAALQNPIYLEVKEALIKERE  343 (422)
Q Consensus       276 i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~---------~~~~~~---~~~aa~~~L~~~~~~~~~~~~~~~~~  343 (422)
                      -+..|.+|..+ ....+|.++.+.+.++.+......         .+-+..   ...+....+....+.++.++..+..+
T Consensus       227 Sis~s~HK~~g-~P~g~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~  305 (374)
T PLN03032        227 SVSVSGHKFLG-CPMPCGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAH  305 (374)
T ss_pred             EEEECcccccC-CCcCeEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            56678899665 345689999987776655321111         111222   33333333333455558888889999


Q ss_pred             HHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecCh---hhHHHHHHHHhh
Q 014594          344 RLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKP---EHTDALMECLMH  420 (422)
Q Consensus       344 ~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~---~~~~~l~~al~~  420 (422)
                      ++.+.|++.++.....+..+.+.++-|   +.+.    + .+|..+...     .+.+||.+...   +..|+|.+.|++
T Consensus       306 ~l~~~l~~~~~~~~~~p~~~~V~f~~~---~~~~----~-~~~w~l~~~-----~~~~hi~vm~~~~~~~id~fi~dl~~  372 (374)
T PLN03032        306 YLKDRLTEAGLTCRLNELSSTVVFERP---MDEA----F-IKKWQLACE-----GDIAHVVVMPNVTVEKLDEFVEELVE  372 (374)
T ss_pred             HHHHHHHhCCCcEEECCCceEEEEcCC---CcHh----H-hheeeeccc-----CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence            999999988765555566666666654   1121    2 245555542     35899998753   334555554443

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=99.74  E-value=2.3e-15  Score=147.48  Aligned_cols=256  Identities=15%  Similarity=0.007  Sum_probs=177.9

Q ss_pred             hHHHHHHHHHHcCCCC-CCEEEeCCHH-HHHHHHHHHhcC---CCCEEEEcCCCchhHHHHHHHcCCEEEEecC---CCC
Q 014594          131 SRRLRAALAKDSGLES-DHILVGCGAD-ELIDLIMRCVLD---PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSD  202 (422)
Q Consensus       131 ~~~lr~~la~~~~~~~-~~i~~~~G~~-~al~~~~~~l~~---~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~  202 (422)
                      ..++++.+++++|++. +..++++|+| .++.+++.++-.   +||.|+++.-+|......+...|++++.++.   +++
T Consensus       107 ~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~  186 (444)
T TIGR03531       107 TNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDGDE  186 (444)
T ss_pred             HHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecCcC
Confidence            3478888888899852 4688888988 688888776542   5899999999999999999999999999983   567


Q ss_pred             CCCCHHHHHHHhhcC--CCeEEEEeCCC-CccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCc-hh-hhhhcCCcEE
Q 014594          203 FSLNVELIADAVERE--KPKCIFLTSPN-NPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES-RM-EWVKKHDNLI  276 (422)
Q Consensus       203 ~~~d~~~l~~~i~~~--~~~~i~l~~p~-NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~-~~-~~~~~~~~~i  276 (422)
                      +.+|++++++++++.  +..++++.+|+ .++|...+.++|.++|+. |+++|+|++|........ .. .......-.+
T Consensus       187 ~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~~~Grad~  266 (444)
T TIGR03531       187 LTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKAIKVGRVDA  266 (444)
T ss_pred             CCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhccccccCCCe
Confidence            899999999999731  55677777665 556688899999999887 999999999985331100 10 1111112257


Q ss_pred             EEccChhhhccccccceeeec-CHHHHHHHHHhcCCCCCcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCC
Q 014594          277 VLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVP  353 (422)
Q Consensus       277 ~~~S~SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~  353 (422)
                      ++.|++|.+.++|+ .|.+++ ++++++.+.........+...+.+...++..+ ++.+ +.++..++++++.+.|+++.
T Consensus       267 vv~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~~y~g~~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~  345 (444)
T TIGR03531       267 VVSSTDKNFMVPVG-GAIIYSFDENFIQEISKSYPGRASASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLA  345 (444)
T ss_pred             EEEeCccCCCCCCC-EEEEEECCHHHHHHHHHhccCCCCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            78899999987775 444446 78888888765333334456676666666543 4445 88888899999999887752


Q ss_pred             ---CCcccCCCceEEE--EEeC--CCCCHHHHHHHHHhCCc
Q 014594          354 ---FLNPYPSYSNFIL--CEVT--SGMDAKKLKDDLAKMGV  387 (422)
Q Consensus       354 ---~~~~~p~~~~f~~--~~~~--~~~~~~~~~~~L~~~gI  387 (422)
                         +..+.....|-+.  +.+.  .+.+...+-..|-.++|
T Consensus       346 ~~~~~~~~~~~~n~is~~~~~~~~~~~~~~~~g~~l~~~~v  386 (444)
T TIGR03531       346 ERHGERLLDTPENPISSAMTLSTLKGKDPTMLGSMLYSRRV  386 (444)
T ss_pred             HhhCcEeecCCCCceeEEEecccccccCHHHHHHHHHhCCC
Confidence               1233333333333  3332  13467777777876665

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>PRK07678 aminotransferase; Validated

Probab=99.74  E-value=4.3e-15  Score=148.00  Aligned_cols=324  Identities=15%  Similarity=0.118  Sum_probs=200.5

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      ..+++.+||+..+.  ..+ ..+|++.+++.+ +...    ..|+.+...+|.+.|++.++. .+.+++++++++|++.+
T Consensus        43 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~lae~l~~~~~~-~~~v~f~~sGseA~e~A  121 (451)
T PRK07678         43 DIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPLTQSHEPAIKLAEKLNEWLGG-EYVIFFSNSGSEANETA  121 (451)
T ss_pred             eCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCccccccCCHHHHHHHHHHHHhCCC-CCEEEEeCCcHHHHHHH
Confidence            35678899998763  223 357888888765 2211    223444456788888888764 35899999999999999


Q ss_pred             HHHhcC-------CC-CEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCCCCC---------C---HHH
Q 014594          163 MRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSL---------N---VEL  209 (422)
Q Consensus       163 ~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~~---------d---~~~  209 (422)
                      ++....       +| .+|+....+|++....+.. .|.            .+..++.++.+..         |   ++.
T Consensus       122 lklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (451)
T PRK07678        122 FKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKE  201 (451)
T ss_pred             HHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHH
Confidence            985321       23 5789888889765543332 111            1222332111111         1   233


Q ss_pred             HHHHhh---cCCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEc
Q 014594          210 IADAVE---REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLR  279 (422)
Q Consensus       210 l~~~i~---~~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~  279 (422)
                      +++.+.   .+++.+|++.....-.|.+.+    .++++++|+. |+++|.||++..|...+..  ....+-.++++   
T Consensus       202 l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDiv---  278 (451)
T PRK07678        202 IDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDII---  278 (451)
T ss_pred             HHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEE---
Confidence            565563   256888988876666788775    3455666665 9999999999988643322  12222233333   


Q ss_pred             cChhhhcccc-ccceeeecCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHH
Q 014594          280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLF  346 (422)
Q Consensus       280 S~SK~~~~~G-~r~G~i~~~~~~~~~l~~--------~~~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~  346 (422)
                      +++|.+| .| +.+|.+++++++.+.+..        ...+|+.|+++.+++.+.|+.   ++..+ ..+.-...++.|.
T Consensus       279 t~gK~lg-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~  357 (451)
T PRK07678        279 TMAKGIT-SAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIERSAQLGELLLEQLK  357 (451)
T ss_pred             Eeecccc-cCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence            5689998 56 699999999999887753        234578889998888888763   33333 3333334444444


Q ss_pred             HHHccCCCCcccCCCceEEEEEeCCC------CC---HHHHHHHHHhCCcEEEeCCC--CCCCCeEEEEec---ChhhHH
Q 014594          347 KLLKDVPFLNPYPSYSNFILCEVTSG------MD---AKKLKDDLAKMGVMIRHYNN--KELKGYVRVSVG---KPEHTD  412 (422)
Q Consensus       347 ~~L~~~~~~~~~p~~~~f~~~~~~~~------~~---~~~~~~~L~~~gI~v~~~~~--~~~~~~iRis~~---~~~~~~  412 (422)
                      +.+++++.+......|.++.+++...      .+   ...+...|.++||++.+...  +...+.+||+..   +.++++
T Consensus       358 ~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid  437 (451)
T PRK07678        358 EELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIA  437 (451)
T ss_pred             HHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEECCCcCCHHHHH
Confidence            44445554433456677777776311      11   35677888899999976432  233578999865   445555


Q ss_pred             HHHHHHh
Q 014594          413 ALMECLM  419 (422)
Q Consensus       413 ~l~~al~  419 (422)
                      ++.++++
T Consensus       438 ~~~~~l~  444 (451)
T PRK07678        438 FIVGTLK  444 (451)
T ss_pred             HHHHHHH
Confidence            5555443

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=99.73  E-value=2.5e-15  Score=145.57  Aligned_cols=325  Identities=17%  Similarity=0.159  Sum_probs=213.3

Q ss_pred             CCCCCCeEEcCCCCCCC---CCCHHHHHHHhc-C---CC-CCCC-CCcchHHHHHHHHHHcCC-CCCCEEEeCCHHHHHH
Q 014594           91 GRKPEDIVKIDANENPY---GPPPEVREALGQ-L---KF-PYIY-PDPESRRLRAALAKDSGL-ESDHILVGCGADELID  160 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~~~---~~~~~v~~al~~-~---~~-~~~y-~~~~~~~lr~~la~~~~~-~~~~i~~~~G~~~al~  160 (422)
                      +.+++.+|||.++.+..   ..+|.|.+|+.+ +   .+ ...| +.....++-+.|.+.... ..+.+++++++++|++
T Consensus        52 DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E  131 (447)
T COG0160          52 DVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVE  131 (447)
T ss_pred             eCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHH
Confidence            45688899999965433   468999999876 2   21 2333 223456777888887765 4678999999999999


Q ss_pred             HHHHHh--cCCCCEEEEcCCCchhHHHHHHH-cC-------------CEEEEecCCCCC----CC--------CHHHHHH
Q 014594          161 LIMRCV--LDPGDKIVDCPPTFTMYEFDAAV-NG-------------AAVVKVPRKSDF----SL--------NVELIAD  212 (422)
Q Consensus       161 ~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~-~g-------------~~~~~v~~~~~~----~~--------d~~~l~~  212 (422)
                      .+++.-  ......|+.....|++....+.. .|             ..++.+|.+..+    ..        ..+.+++
T Consensus       132 ~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~  211 (447)
T COG0160         132 AAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIER  211 (447)
T ss_pred             HHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHH
Confidence            999943  22346799888888754433321 11             125555532221    11        2344555


Q ss_pred             Hhhc-----CCCeEEEEeCCCCccCcCCCHHHH----HHHHcC-CCeEEEccCCccccCCCchhhh--hhcCCcEEEEcc
Q 014594          213 AVER-----EKPKCIFLTSPNNPDGSIINDEDL----LKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRT  280 (422)
Q Consensus       213 ~i~~-----~~~~~i~l~~p~NPtG~~~~~e~l----~~i~~~-~~~li~Deay~~~~~~~~~~~~--~~~~~~~i~~~S  280 (422)
                      .+..     .++.++++...+.-.|.+.+.+.+    +++|+. |+++|+||++..|...+.....  .+-.++++   +
T Consensus       212 ~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDiv---t  288 (447)
T COG0160         212 ALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIV---T  288 (447)
T ss_pred             HHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEE---E
Confidence            4432     357899999999999999876544    445555 9999999999999876643222  22223333   5


Q ss_pred             ChhhhccccccceeeecCHHHHHHHH-HhcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCC
Q 014594          281 FSKRAGLAGLRVGYGAFPLSIIEYLW-RAKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFL  355 (422)
Q Consensus       281 ~SK~~~~~G~r~G~i~~~~~~~~~l~-~~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~  355 (422)
                      ++|.+| .|+.+|.+++++++.+... .....|..|+.+.+++.+.|+.-+-..+.++..+.-+++++.|.+    ++.+
T Consensus       289 ~aK~ig-~G~Pl~avv~r~ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~I  367 (447)
T COG0160         289 LAKSLG-GGLPLSAVVGRAEIMDWPPGGHGGTFGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLI  367 (447)
T ss_pred             eccccc-CCCceeEEeccHHhcccCCcccCCCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCce
Confidence            789998 5999999999999888221 122347889999999999986321112555555666666666654    4433


Q ss_pred             cccCCCceEEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          356 NPYPSYSNFILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       356 ~~~p~~~~f~~~~~~~~--------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      --....|.++.+++-..        .-.+.+.+.+.++|+.+..++  ...+.+||.....-+.++++++++.|
T Consensus       368 gdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G--~~~nviRi~PPL~is~e~~d~~l~il  439 (447)
T COG0160         368 GDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCG--PHGNVLRILPPLTISDEELDEGLDIL  439 (447)
T ss_pred             ecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccC--CCCcEEEEeCCcccCHHHHHHHHHHH
Confidence            33467788988887421        225678888899999888765  23589999976433335555555443

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=99.73  E-value=5.5e-15  Score=147.08  Aligned_cols=322  Identities=15%  Similarity=0.162  Sum_probs=196.7

Q ss_pred             CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCC---CC--CCCCcchHHHHHHHHHHcCCC--CCC-EEEeCCHHHH
Q 014594           91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKF---PY--IYPDPESRRLRAALAKDSGLE--SDH-ILVGCGADEL  158 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~---~~--~y~~~~~~~lr~~la~~~~~~--~~~-i~~~~G~~~a  158 (422)
                      +.+++.+||+..+..  .+ ..+|++.+++.+ +..   .+  .++.+...+|-++|++..+..  ... +++++++++|
T Consensus        35 D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA  114 (442)
T TIGR00709        35 DVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADA  114 (442)
T ss_pred             eCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHH
Confidence            456788999988742  22 457889888876 221   11  134444567778888776522  134 4556999999


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCchhHHHHHHH-cC------------CEEEEecCCCCCCC--------CH----HHHH
Q 014594          159 IDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFSL--------NV----ELIA  211 (422)
Q Consensus       159 l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~~--------d~----~~l~  211 (422)
                      ++.+++...  ....+|+....+|++....+.. .|            ..+..++..+.+..        +.    +.++
T Consensus       115 ~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (442)
T TIGR00709       115 VEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFE  194 (442)
T ss_pred             HHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHH
Confidence            999999432  2236799999999766544432 22            01233332211111        11    1233


Q ss_pred             HHhhc-----CCCeEEEEeCCCCccCcC-CCHHHHHHHHcC----CCeEEEccCCccccCCCchhh--hhhcCCcEEEEc
Q 014594          212 DAVER-----EKPKCIFLTSPNNPDGSI-INDEDLLKILEM----PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLR  279 (422)
Q Consensus       212 ~~i~~-----~~~~~i~l~~p~NPtG~~-~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~  279 (422)
                      +.+..     .++.++++....+..|.+ .+.+.++++.+.    |+++|.||+|..|...+....  ..+..+++++  
T Consensus       195 ~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--  272 (442)
T TIGR00709       195 NFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVV--  272 (442)
T ss_pred             HHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEE--
Confidence            33321     457888888665555554 677777766553    999999999999865443222  2222333333  


Q ss_pred             cChhhhccccccceeeecCHHHHHHHHH--hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CC
Q 014594          280 TFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VP  353 (422)
Q Consensus       280 S~SK~~~~~G~r~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~  353 (422)
                       ++|.++ .|+++|+++++++ ++.+..  ....|+.++++++++.++|+.-+-.+..++.+++.+++.+.|++    ++
T Consensus       273 -~gK~l~-~G~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~  349 (442)
T TIGR00709       273 -MSKAVG-GGLPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHP  349 (442)
T ss_pred             -Eccccc-CCcccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence             799998 4899999999988 444421  22357889999999999985311111555666667777666654    44


Q ss_pred             CCcccCCCceEEEEEeCCCC--------------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHH
Q 014594          354 FLNPYPSYSNFILCEVTSGM--------------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALME  416 (422)
Q Consensus       354 ~~~~~p~~~~f~~~~~~~~~--------------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~  416 (422)
                      .+.-....|.++.+++.+..              -...+...+.++||++.+...  ..+.+|+..+   +.++++++.+
T Consensus       350 ~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~--~~~~l~~~Ppl~it~~ei~~~~~  427 (442)
T TIGR00709       350 CIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGR--EGEVFRLLCPITIDQEECEEGIS  427 (442)
T ss_pred             CeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCC--CCCEEEEECCCCCCHHHHHHHHH
Confidence            44334567788877774211              134567778899999976432  2478999876   3444444444


Q ss_pred             HHh
Q 014594          417 CLM  419 (422)
Q Consensus       417 al~  419 (422)
                      +++
T Consensus       428 ~l~  430 (442)
T TIGR00709       428 RFK  430 (442)
T ss_pred             HHH
Confidence            443

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=99.73  E-value=2.8e-15  Score=148.94  Aligned_cols=320  Identities=18%  Similarity=0.161  Sum_probs=200.9

Q ss_pred             CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHH
Q 014594           91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~-----~~y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~  160 (422)
                      ..+++.++|+..+..  .+ ..+|++.+++.+ +...     ..|+.+...+|.+.|++..+-. .+.+++++++++|++
T Consensus        50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e  129 (441)
T PRK05769         50 DVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNE  129 (441)
T ss_pred             eCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccCcccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHH
Confidence            356788999987743  33 346888888876 2211     1233444567777777776422 368999999999999


Q ss_pred             HHHHHhc--CCCCEEEEcCCCchhHHHHHHH-cCC-------------EEEEecCCCCC----C-CC--------HHHHH
Q 014594          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSDF----S-LN--------VELIA  211 (422)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~----~-~d--------~~~l~  211 (422)
                      .+++.-.  ...++|+....+|++....+.. .|.             .+..++.++.+    + -|        ++.++
T Consensus       130 ~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le  209 (441)
T PRK05769        130 AAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIE  209 (441)
T ss_pred             HHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHH
Confidence            9998431  2236788888888765543322 121             12233321111    1 11        23455


Q ss_pred             H-Hhh----cCCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEc
Q 014594          212 D-AVE----REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLR  279 (422)
Q Consensus       212 ~-~i~----~~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~  279 (422)
                      + .++    ..++.+|++.......|...+    .+++.++|+. |+++|+||++..|...+..  ....+..++++   
T Consensus       210 ~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDiv---  286 (441)
T PRK05769        210 DYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDII---  286 (441)
T ss_pred             HHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCCEE---
Confidence            5 222    246788888877777899888    7778888876 9999999999987543322  11222223333   


Q ss_pred             cChhhhccccccceeeecCHHHHHHHHH-hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCC
Q 014594          280 TFSKRAGLAGLRVGYGAFPLSIIEYLWR-AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPF  354 (422)
Q Consensus       280 S~SK~~~~~G~r~G~i~~~~~~~~~l~~-~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~  354 (422)
                      +|+|.++ .|+++|++++++++.+.+.. ....|+.++++++++.++|+.-+- +..++.+++.++|.+.|++    ++.
T Consensus       287 t~~K~l~-~G~p~gav~~~~~i~~~~~~~~~~T~~g~p~~~aaa~a~L~~l~~-~~~~~~~~~g~~l~~~L~~l~~~~~~  364 (441)
T PRK05769        287 TLAKAIA-GGLPLGAVIGRAELMFLPPGSHANTFGGNPVAAAAALATLEELEE-GLLENAQKLGEYLRKELKELKEKYEF  364 (441)
T ss_pred             EEccccc-CCcccEEEEEehhhhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4789998 78999999999988753321 223466788998888888864322 4555666666666666654    443


Q ss_pred             CcccCCCceEEEEEeCCC------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          355 LNPYPSYSNFILCEVTSG------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       355 ~~~~p~~~~f~~~~~~~~------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      +.-....|.++.+.+.+.      .....+.+.+.++||.+.+..    .+.+|++..   +.++++++.++++
T Consensus       365 ~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~  434 (441)
T PRK05769        365 IGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLGAG----KSAIRIIPPLIITEEEADIGLEILE  434 (441)
T ss_pred             eeeeecceEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHH
Confidence            322345567777777321      113457777889999997643    378999976   3445555555443

>PLN02271 serine hydroxymethyltransferase

Probab=99.73  E-value=5.7e-15  Score=145.52  Aligned_cols=318  Identities=16%  Similarity=0.097  Sum_probs=208.4

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC---CCCCCCC------Ccc-hHHH----HHHHHHHcCCCC----CCEEEeCCHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL---KFPYIYP------DPE-SRRL----RAALAKDSGLES----DHILVGCGAD  156 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~y~------~~~-~~~l----r~~la~~~~~~~----~~i~~~~G~~  156 (422)
                      .+-|.|-..||-.  ++.+++++...   .+..+||      ... ..++    .+...+.|+.+.    .+|..- +++
T Consensus       148 ~~~l~LIASEN~~--S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~-SGs  224 (586)
T PLN02271        148 FKGIELIASENFV--CRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY-SCT  224 (586)
T ss_pred             hcCeeeccccccC--CHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec-cHH
Confidence            4458888888866  58889998752   2333343      221 2233    344445678766    566666 556


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCchhHHHH---------HHHcCCEEEEec--C-CCCCCCCHHHHHHHhhcCCCeEEEE
Q 014594          157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---------AAVNGAAVVKVP--R-KSDFSLNVELIADAVEREKPKCIFL  224 (422)
Q Consensus       157 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---------~~~~g~~~~~v~--~-~~~~~~d~~~l~~~i~~~~~~~i~l  224 (422)
                      .|+..++.++++|||+|+..+..|.++...         +...|..+..++  . +++..+|.+++++.....+||+|++
T Consensus       225 ~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~  304 (586)
T PLN02271        225 SANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILIC  304 (586)
T ss_pred             HHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEE
Confidence            677788888999999999988777543221         233565544444  4 3456899999999665589999998


Q ss_pred             eCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHH---
Q 014594          225 TSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS---  300 (422)
Q Consensus       225 ~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~---  300 (422)
                      ..-.+|  ..+|.+++.+||+. |+++++|.+|....-.......... ...++..|.+|.+  .|-|.|.++.+++   
T Consensus       305 g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~-~aDvvt~TTHKtL--rGPrGG~I~~r~~~~~  379 (586)
T PLN02271        305 GGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFD-YCDIVTSTTHKSL--RGPRGGIIFYRKGPKL  379 (586)
T ss_pred             Cchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCc-CCcEEEeCCcccC--CCCCceEEEecccccc
Confidence            877787  88999999999997 9999999999854321111111111 2458899999975  5667788887653   


Q ss_pred             -----------------HHHHHHHhcCCC---CCcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHccCCCCcc
Q 014594          301 -----------------IIEYLWRAKQPY---NVSVAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKDVPFLNP  357 (422)
Q Consensus       301 -----------------~~~~l~~~~~~~---~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~  357 (422)
                                       +.+++.....|.   ++.....++...+++   .++|.+..+++.++.+.|.+.|.+.|+..+
T Consensus       380 ~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~G~~vv  459 (586)
T PLN02271        380 RKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRRKCRLV  459 (586)
T ss_pred             cccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHCCCeEe
Confidence                             455555444442   111112333334444   356645777888999999999988875544


Q ss_pred             cC-CCceEEEEEeCC-CCCHHHHHHHHHhCCcEEE----eCCC-CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014594          358 YP-SYSNFILCEVTS-GMDAKKLKDDLAKMGVMIR----HYNN-KELKGYVRVSVG-------KPEHTDALMECLMH  420 (422)
Q Consensus       358 ~p-~~~~f~~~~~~~-~~~~~~~~~~L~~~gI~v~----~~~~-~~~~~~iRis~~-------~~~~~~~l~~al~~  420 (422)
                      .. .+...+++++.+ +.+...+.+.|.+.||.+.    |++. +..++.|||+..       .+++++++.+.+.+
T Consensus       460 ~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~  536 (586)
T PLN02271        460 TGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLR  536 (586)
T ss_pred             eCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHH
Confidence            32 233457788853 5678888888889999996    3332 334678999863       35566666665554

>PRK06105 aminotransferase; Provisional

Probab=99.72  E-value=4.5e-15  Score=148.11  Aligned_cols=319  Identities=12%  Similarity=0.101  Sum_probs=197.3

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCC---C---CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFP---Y---IYPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~---~---~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~  160 (422)
                      ..+++.+||+..+.  ..+ ..+|++.+++.+ +...   .   .|..+...++.+.|++.++.+-+.+++++++++|++
T Consensus        44 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve  123 (460)
T PRK06105         44 DDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEAND  123 (460)
T ss_pred             ECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence            45678899998773  233 457888888876 2211   1   233334567888888877544568999999999999


Q ss_pred             HHHHHhc------C-CC-CEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCCCCC-------------C
Q 014594          161 LIMRCVL------D-PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSL-------------N  206 (422)
Q Consensus       161 ~~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~~-------------d  206 (422)
                      .+++...      . +| .+|+....+|++....+.. .|.            .+..++.+..+..             .
T Consensus       124 ~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  203 (460)
T PRK06105        124 TVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRL  203 (460)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHH
Confidence            9999531      1 23 5788888888755433211 111            1122221111111             1


Q ss_pred             HHHHHHHhh---cCCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEE
Q 014594          207 VELIADAVE---REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLI  276 (422)
Q Consensus       207 ~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i  276 (422)
                      .+++++.+.   ..++.+|++.......|...+    .+++++||+. |+++|+||++..|...+...  ...+..++  
T Consensus       204 ~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PD--  281 (460)
T PRK06105        204 ANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPD--  281 (460)
T ss_pred             HHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCC--
Confidence            356777663   245788888877777788876    5666677766 99999999998875433221  11222233  


Q ss_pred             EEccChhhhcccc-ccceeeecCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHH
Q 014594          277 VLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLF  346 (422)
Q Consensus       277 ~~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~  346 (422)
                       +.+++|.++ .| +.+|.+++++++.+.+...         ..+|+.|+++.+++.+.|+.-+-.+..++.++..++|.
T Consensus       282 -i~~~gK~lg-gG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~  359 (460)
T PRK06105        282 -ILVMSKQLS-SSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEERDLVGNAAERGARLQ  359 (460)
T ss_pred             -eeeeecccc-cCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence             336789987 56 6899999999998877531         23467888888888777753110014445555555555


Q ss_pred             HHHcc---CCCCcccCCCceEEEEEeCCC------CC-----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chh
Q 014594          347 KLLKD---VPFLNPYPSYSNFILCEVTSG------MD-----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPE  409 (422)
Q Consensus       347 ~~L~~---~~~~~~~p~~~~f~~~~~~~~------~~-----~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~  409 (422)
                      +.|++   ++.+.-....|.+.-+++...      .+     +..+...+.++||.+.+..     +.+|++..   +.+
T Consensus       360 ~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~g-----~~i~l~Ppl~it~~  434 (460)
T PRK06105        360 ARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAMG-----DTLAFCPPLIITAA  434 (460)
T ss_pred             HHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEecC-----CEEEEECCCccCHH
Confidence            55544   443333446677776766311      01     2467777889999998742     58999866   344


Q ss_pred             hHHHHHHHH
Q 014594          410 HTDALMECL  418 (422)
Q Consensus       410 ~~~~l~~al  418 (422)
                      +++++.+++
T Consensus       435 eid~~~~~l  443 (460)
T PRK06105        435 QVDEMVDRF  443 (460)
T ss_pred             HHHHHHHHH
Confidence            444444444

>PRK06062 hypothetical protein; Provisional

Probab=99.72  E-value=7.5e-15  Score=146.17  Aligned_cols=320  Identities=14%  Similarity=0.106  Sum_probs=200.0

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      +.+++.+||+..+.  ..+ ..+|++.+++.+ +...    ..|..+...+|-+.|++...-..+.+++++++++|.+.+
T Consensus        49 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~A  128 (451)
T PRK06062         49 DYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAPAHANDARSEAARLIAERAPGDLSKVFFTNGGADANEHA  128 (451)
T ss_pred             ECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCCccCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHH
Confidence            45678899998874  333 357888888876 2211    233444456788888887753356999999999999999


Q ss_pred             HHHhc--CCCCEEEEcCCCchhHHHHHHH-cCC-----------EEEEecCCCCCC------CC-------HHHHHHHhh
Q 014594          163 MRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-----------AVVKVPRKSDFS------LN-------VELIADAVE  215 (422)
Q Consensus       163 ~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-----------~~~~v~~~~~~~------~d-------~~~l~~~i~  215 (422)
                      ++.-.  ....+|+....+|++....+.. .|.           .+..++.+..+.      -|       ++.+++.++
T Consensus       129 lklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~  208 (451)
T PRK06062        129 VRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIE  208 (451)
T ss_pred             HHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHH
Confidence            99432  2236788888888765543332 111           112222111111      12       577777775


Q ss_pred             c---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhh
Q 014594          216 R---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRA  285 (422)
Q Consensus       216 ~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~  285 (422)
                      .   .++.+|++.......|.+.+    .++++++|+. |+++|+||++..|...+..  ....+-.++   +.+|+|.+
T Consensus       209 ~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PD---i~t~gK~l  285 (451)
T PRK06062        209 LEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPD---LITFAKGV  285 (451)
T ss_pred             hcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCC---eeeechhh
Confidence            2   45778888877777898888    7777788876 9999999999987543322  122222233   33679998


Q ss_pred             ccccc-cceeeecCHHHHHHHHHh----cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHH-HHHHHHHc----cCCCC
Q 014594          286 GLAGL-RVGYGAFPLSIIEYLWRA----KQPYNVSVAAEVAACAALQNPIYLEVKEALIKER-ERLFKLLK----DVPFL  355 (422)
Q Consensus       286 ~~~G~-r~G~i~~~~~~~~~l~~~----~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~-~~l~~~L~----~~~~~  355 (422)
                      + .|+ .+|.+++++++.+.+...    ...|+.++++.+++.+.|+.-+-.+..++.++.. +++.+.|+    +.+.+
T Consensus       286 g-gG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~~v  364 (451)
T PRK06062        286 N-SGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEEGIVENAARIGAEVLGPGLRELAERHPSV  364 (451)
T ss_pred             h-cCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcE
Confidence            7 674 899999999998877532    1247778888888888875311001333333333 24444443    34433


Q ss_pred             cccCCCceEEEEEeCCC------C--------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHH
Q 014594          356 NPYPSYSNFILCEVTSG------M--------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECL  418 (422)
Q Consensus       356 ~~~p~~~~f~~~~~~~~------~--------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al  418 (422)
                      ......|.++.+++...      .        ....+.+.|+++||++.+.     .+.+||+..   +.++++++.+++
T Consensus       365 ~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~-----~~~lrl~ppl~~t~~eid~~~~~l  439 (451)
T PRK06062        365 GEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFVN-----GNRIHVVPPCTVTEDEVREGLAIL  439 (451)
T ss_pred             EeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEeec-----CCEEEEECCccCCHHHHHHHHHHH
Confidence            33445677766766311      0        1346778888999998763     367999874   445555555544


Q ss_pred             h
Q 014594          419 M  419 (422)
Q Consensus       419 ~  419 (422)
                      +
T Consensus       440 ~  440 (451)
T PRK06062        440 D  440 (451)
T ss_pred             H
Confidence            3

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=99.72  E-value=2.4e-15  Score=148.40  Aligned_cols=319  Identities=14%  Similarity=0.145  Sum_probs=198.3

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCC---CC--CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKF---PY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~---~~--~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      +.+++.++|+..+.  ..+ ..+|++.+++.+ +..   ..  .+..+...+|.+.|++..+...+.+++++++++|++.
T Consensus        39 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~  118 (428)
T PRK07986         39 LADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVEV  118 (428)
T ss_pred             eCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHH
Confidence            34678899998763  333 356888888875 321   11  1233345667777777765444799999999999999


Q ss_pred             HHHHhcC------C-CCEEEEcCCCchhHHHHHHHc-CC-------------EEEEecCCCC-C-----CCCHHHHHHHh
Q 014594          162 IMRCVLD------P-GDKIVDCPPTFTMYEFDAAVN-GA-------------AVVKVPRKSD-F-----SLNVELIADAV  214 (422)
Q Consensus       162 ~~~~l~~------~-gd~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~-~-----~~d~~~l~~~i  214 (422)
                      +++....      . ..+|+....+|++....+... +.             .+..++.... +     .-|++.+++.+
T Consensus       119 AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l  198 (428)
T PRK07986        119 AMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLM  198 (428)
T ss_pred             HHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHH
Confidence            9985321      2 367999999997644332221 21             1122221111 1     12567888877


Q ss_pred             hc--CCCeEEEEeCC-CCccCcCC-CH---HHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChhh
Q 014594          215 ER--EKPKCIFLTSP-NNPDGSII-ND---EDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKR  284 (422)
Q Consensus       215 ~~--~~~~~i~l~~p-~NPtG~~~-~~---e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK~  284 (422)
                      .+  .+..+|++... +.-.|... +.   +++.++|+. |+++|+||++..|...+...  ...+..++++   +++|.
T Consensus       199 ~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~---t~gK~  275 (428)
T PRK07986        199 AAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPDIL---CLGKA  275 (428)
T ss_pred             HhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCCEE---Eechh
Confidence            53  35667777753 55556544 43   455666665 99999999998774333221  1122223333   48999


Q ss_pred             hcccc-ccceeeecCHHHHHHHHHh-------cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC---C
Q 014594          285 AGLAG-LRVGYGAFPLSIIEYLWRA-------KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV---P  353 (422)
Q Consensus       285 ~~~~G-~r~G~i~~~~~~~~~l~~~-------~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~---~  353 (422)
                      ++ .| +.+|.+++++++.+.+...       ..+|+.++++.+++.+.|+.-+-.+..++.+++-+++.+.|+++   +
T Consensus       276 l~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~  354 (428)
T PRK07986        276 LT-GGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEAQLREELAPLRDAP  354 (428)
T ss_pred             hh-CCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence            97 77 5889889999999888642       23577888888888887753110014455555556666666543   3


Q ss_pred             CCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHH
Q 014594          354 FLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECL  418 (422)
Q Consensus       354 ~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al  418 (422)
                      .+.-....|.++.+.+....+...+.+.|.++||++.+.+     +.+|+...   +.++++++.+++
T Consensus       355 ~i~~vRg~Gl~~~ve~~~~~~~~~~~~~l~~~Gl~~~~~g-----~~i~~~Ppl~it~~ei~~~~~~l  417 (428)
T PRK07986        355 MVADVRVLGAIGVVETTRPVNMAALQRFFVEQGVWIRPFG-----KLIYLMPPYIILPEQLQRLTAAV  417 (428)
T ss_pred             CEEeEeccceEEEEEeCCcccHHHHHHHHHHCCcEEEecC-----CEEEEeCCCCCCHHHHHHHHHHH
Confidence            2222345677777887644456788899999999998753     68999865   344444444444

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=99.71  E-value=4.6e-15  Score=147.43  Aligned_cols=320  Identities=17%  Similarity=0.172  Sum_probs=203.1

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CC---CCC--CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~---~~~--~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      ..+++.+||+..+.  ..+ ..+|++.+++.+ +.   +..  .++.+...+|.+.|++.+....+.+++++++++|++.
T Consensus        45 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~  124 (445)
T PRK09221         45 DADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQMGHPLAFELAERLAELAPGGLDHVFFTNSGSESVDT  124 (445)
T ss_pred             eCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence            34678899998773  233 357888888775 22   211  2334445678888888775334689999999999999


Q ss_pred             HHHHhc------C-C-CCEEEEcCCCchhHHHHHHHc-C------------CEEEEecCCC-C----CCC--------CH
Q 014594          162 IMRCVL------D-P-GDKIVDCPPTFTMYEFDAAVN-G------------AAVVKVPRKS-D----FSL--------NV  207 (422)
Q Consensus       162 ~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~~-g------------~~~~~v~~~~-~----~~~--------d~  207 (422)
                      +++...      . + ..+|+....+|++....+... |            ..+..+|... .    +..        ..
T Consensus       125 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (445)
T PRK09221        125 ALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELA  204 (445)
T ss_pred             HHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHH
Confidence            998432      1 1 257998899997654332211 1            0122232111 0    111        13


Q ss_pred             HHHHHHhhc---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEE
Q 014594          208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV  277 (422)
Q Consensus       208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~  277 (422)
                      +.+++.+..   .++.+|++.......|...+    .+++.++|+. |+++|+||++..|...+..  ....+..++   
T Consensus       205 ~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PD---  281 (445)
T PRK09221        205 DDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPD---  281 (445)
T ss_pred             HHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCC---
Confidence            566776642   45778888888888899888    7888888887 9999999999877543322  112222223   


Q ss_pred             EccChhhhcccc-ccceeeecCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHH
Q 014594          278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFK  347 (422)
Q Consensus       278 ~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~  347 (422)
                      +.+++|.++ .| +.+|.+++++++.+.+..         ....|+.++++.+++.+.|+.-+-.+..++.++..+++.+
T Consensus       282 i~~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~  360 (445)
T PRK09221        282 IITFAKGLT-NGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREEDLFERAAELAPYFED  360 (445)
T ss_pred             EEEeccccc-cCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence            236789987 55 679999999999887643         1234677888888888777532111255667777777777


Q ss_pred             HHccC---CCCcccCCCceEEEEEeCC-----CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHH
Q 014594          348 LLKDV---PFLNPYPSYSNFILCEVTS-----GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALME  416 (422)
Q Consensus       348 ~L~~~---~~~~~~p~~~~f~~~~~~~-----~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~  416 (422)
                      .|+++   +.+.-....|.+..+++..     ......+.+.|.++||.++.+.     +.+||+..   +.++++++.+
T Consensus       361 ~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~-----~~lr~~Ppl~~t~~eid~~~~  435 (445)
T PRK09221        361 AVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYTG-----DTIALSPPLIIEKAQIDELVD  435 (445)
T ss_pred             HHHhhccCCCEEEEecCceEEEEEEecccccccchHHHHHHHHHHCCeEEeecC-----CEEEEECCccCCHHHHHHHHH
Confidence            77664   3222234456666666532     1124578888889999998643     68999965   4455555555


Q ss_pred             HHh
Q 014594          417 CLM  419 (422)
Q Consensus       417 al~  419 (422)
                      +++
T Consensus       436 ~l~  438 (445)
T PRK09221        436 ALG  438 (445)
T ss_pred             HHH
Confidence            544

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=99.71  E-value=7.1e-15  Score=145.96  Aligned_cols=320  Identities=18%  Similarity=0.180  Sum_probs=200.0

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CC---CCC--CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~---~~~--~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      ..+++.++|+..+.  ..+ ..+|++.+++.+ +.   +..  .++.+...++.+.|++.+.-..+.+++++++++|++.
T Consensus        42 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~  121 (442)
T PRK13360         42 THDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGGLNHVFFTNSGSESVDT  121 (442)
T ss_pred             eCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence            34577899998773  223 457888888875 22   111  2233445577778877764334689999999999999


Q ss_pred             HHHHhcC-------C-CCEEEEcCCCchhHHHHHHH-cC------------CEEEEecCCCC-----CCC--------CH
Q 014594          162 IMRCVLD-------P-GDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSD-----FSL--------NV  207 (422)
Q Consensus       162 ~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~-----~~~--------d~  207 (422)
                      +++....       + ..+|+....+|++....+.. .|            ..+..+|....     +..        .+
T Consensus       122 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  201 (442)
T PRK13360        122 ALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELA  201 (442)
T ss_pred             HHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHH
Confidence            9884321       2 25799999999765432221 11            11222332110     111        14


Q ss_pred             HHHHHHhhc---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEE
Q 014594          208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV  277 (422)
Q Consensus       208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~  277 (422)
                      +.+++.+..   .++.+|++.......|...+    .++++++|+. |+++|+||++..|...+..  ....+..+++  
T Consensus       202 ~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi--  279 (442)
T PRK13360        202 DELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDL--  279 (442)
T ss_pred             HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCce--
Confidence            577777742   45678888877888899988    7888888886 9999999999877533322  1122222222  


Q ss_pred             EccChhhhcccc-ccceeeecCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHH
Q 014594          278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFK  347 (422)
Q Consensus       278 ~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~  347 (422)
                       .+|+|.++ .| +.+|.+++++++.+.+...         ...|+.++++.+++.++|+.-+-....++.+++.+++.+
T Consensus       280 -vt~gK~l~-gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~  357 (442)
T PRK13360        280 -LTCAKGLT-NGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGLLTRAARLAPYWED  357 (442)
T ss_pred             -eeeeeccc-cCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence             36799987 56 7899999999998876531         234677888888888887531100155566666667767


Q ss_pred             HHccC---CCCcccCCCceEEEEEeCC-----CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHH
Q 014594          348 LLKDV---PFLNPYPSYSNFILCEVTS-----GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALME  416 (422)
Q Consensus       348 ~L~~~---~~~~~~p~~~~f~~~~~~~-----~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~  416 (422)
                      .|+++   +.+......|.+.-+.+..     .....++.+.|.++||++....     +.+||+..   +.+++|++.+
T Consensus       358 ~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~~-----~~lr~~Ppl~~t~~eid~~~~  432 (442)
T PRK13360        358 ALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYTG-----DILALSPPLIIEEAQIDELFD  432 (442)
T ss_pred             HHHHhhcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEecC-----CEEEEeCCCccCHHHHHHHHH
Confidence            66654   2222223445555555531     1124577788889999998643     57999965   3445555555


Q ss_pred             HHh
Q 014594          417 CLM  419 (422)
Q Consensus       417 al~  419 (422)
                      +++
T Consensus       433 ~l~  435 (442)
T PRK13360        433 ILA  435 (442)
T ss_pred             HHH
Confidence            544

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=99.71  E-value=2.3e-15  Score=145.36  Aligned_cols=300  Identities=15%  Similarity=0.184  Sum_probs=197.4

Q ss_pred             CCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CC---C-CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           92 RKPEDIVKIDANE--NPY-GPPPEVREALGQ-LK---F-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        92 ~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~---~-~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      .+++.++|+..+.  ..+ ..+|++.+++.+ +.   + ...|+.+...++.++++++.+.  +.+++++++++|++.++
T Consensus        21 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~l~~~~~~--~~v~~~~SGseA~e~Al   98 (364)
T PRK04013         21 SQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWVNY--EYVYMGNSGTEAVEAAL   98 (364)
T ss_pred             CCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccCCcCCHHHHHHHHHHHhhcCC--CEEEEeCchHHHHHHHH
Confidence            4577899998764  333 356888888875 22   1 1235555567889999988764  58999999999999999


Q ss_pred             HHh-cCCC-CEEEEcCCCchhHHHHHHHc-C-------CE-----EEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCC
Q 014594          164 RCV-LDPG-DKIVDCPPTFTMYEFDAAVN-G-------AA-----VVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN  228 (422)
Q Consensus       164 ~~l-~~~g-d~Vl~~~p~y~~~~~~~~~~-g-------~~-----~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~  228 (422)
                      +.. ..+| ++|+....+|+.....+... +       ..     +..+|    + .|++.+++.+. .++++|++.+.+
T Consensus        99 klar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~----~-~d~~~l~~~i~-~~~aAvivEpi~  172 (364)
T PRK04013         99 KFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIP----F-NDVEAAKEAIT-KETAAVIFEPIQ  172 (364)
T ss_pred             HHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEec----C-CCHHHHHHHhc-CCcEEEEEcCCc
Confidence            954 2245 88999999998654433221 1       11     11122    1 26889999886 689999988777


Q ss_pred             CccCcCC-C---HHHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChhhhccccccceeeecCHHH
Q 014594          229 NPDGSII-N---DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (422)
Q Consensus       229 NPtG~~~-~---~e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~  301 (422)
                      ...|... +   .++++++|+. |+++|+||++..+ ..+...  ...+-.++++   +++|.++ .|+.+|.++.+.++
T Consensus       173 g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PDiv---~~gK~lg-gG~P~~a~~~~~~~  247 (364)
T PRK04013        173 GEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIV---TMGKGIG-NGVPVSLTLTNFDV  247 (364)
T ss_pred             CCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCCCCCEE---Eeccccc-CCceeEEEEecccc
Confidence            7667655 4   5677777876 9999999999987 433322  2223334444   4589998 68999999988775


Q ss_pred             HHHHHHhcCCCCCcHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHH
Q 014594          302 IEYLWRAKQPYNVSVAAEVAACAALQN---PIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL  378 (422)
Q Consensus       302 ~~~l~~~~~~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~  378 (422)
                      ..  .....+|+.++++.+++.+.|+-   ++..+   +.++.   + ..+.. +.+.-....|.++-+++.+  ....+
T Consensus       248 ~~--~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~---~~~~~---l-~~l~~-~~v~~vRG~Gl~~gve~~~--~~~~i  315 (364)
T PRK04013        248 ER--GKHGSTFGGNPLACKAVAVTLRILRRERLVE---KAGEK---F-IEIKG-ERVVTTRGRGLMIGIVLKK--PVGKY  315 (364)
T ss_pred             cC--CCcCCCCCcCHHHHHHHHHHHHHHHhccHHH---HHHHH---H-HHhcc-CcceeeeeCcEEEEEEeCC--cHHHH
Confidence            21  12334577889988888888753   33333   22221   2 22222 3333345778888888853  36778


Q ss_pred             HHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594          379 KDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       379 ~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  420 (422)
                      .+.+.++|+.+.+..    .+.+|+.....-+.+++.+++++
T Consensus       316 ~~~~~~~Gll~~~~g----~~vlr~~Ppl~it~~~i~~~~~~  353 (364)
T PRK04013        316 VEELQNRGYLVHTAG----QRVIRLLPPLIISKDTMEEAKSA  353 (364)
T ss_pred             HHHHHhCCcEEeeCC----CCEEEEeCCcccCHHHHHHHHHH
Confidence            888999999997643    47899997632222444444443

>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species

Probab=99.71  E-value=2.9e-16  Score=143.66  Aligned_cols=271  Identities=21%  Similarity=0.239  Sum_probs=166.6

Q ss_pred             hHHHHHHHHHHc---C---CCCCCEEEeCCHHHHHHHHHHHhcCC----C--CEEEEcCCCchhHHHHHHHcCCEEEEec
Q 014594          131 SRRLRAALAKDS---G---LESDHILVGCGADELIDLIMRCVLDP----G--DKIVDCPPTFTMYEFDAAVNGAAVVKVP  198 (422)
Q Consensus       131 ~~~lr~~la~~~---~---~~~~~i~~~~G~~~al~~~~~~l~~~----g--d~Vl~~~p~y~~~~~~~~~~g~~~~~v~  198 (422)
                      ..+|++.|.+++   |   .+...|++++|+++++++++.+|...    +  -.|+...|.|+.|......+.-......
T Consensus        45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~  124 (363)
T PF04864_consen   45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWA  124 (363)
T ss_dssp             -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEE
T ss_pred             cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcccc
Confidence            578999999887   2   24558999999999999999998432    1  4699999999999987655433333322


Q ss_pred             -CCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEE
Q 014594          199 -RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLI  276 (422)
Q Consensus       199 -~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i  276 (422)
                       ....|. +      . ....+-+=++++||||.|.+     .+.+++- +..+|.|-+|..=.+.  ++..  ..+.+|
T Consensus       125 Gda~~~~-~------~-~~~~~~IElVTSPNNPDG~l-----r~~V~~g~~~k~I~D~AYYWPhyT--pI~~--~aD~Di  187 (363)
T PF04864_consen  125 GDASNFK-N------S-DNPSPYIELVTSPNNPDGQL-----REAVLNGSSGKVIHDLAYYWPHYT--PITA--PADHDI  187 (363)
T ss_dssp             EECCCGT-T--------S-CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS-----S---B--SE
T ss_pred             ccHHhhc-c------C-CCCCCeEEEEeCCCCCcccc-----cchhcCCCCcceeeeeeeeccccc--ccCC--CCCCce
Confidence             112221 1      0 01234455778999999987     3445554 6678999999843222  2222  234458


Q ss_pred             EEccChhhhccccccceeeecC-HHHHHHHHHhcC--CCCCcHHHHHHHHHHccC-----------ChHHH-HHHHHHHH
Q 014594          277 VLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQ--PYNVSVAAEVAACAALQN-----------PIYLE-VKEALIKE  341 (422)
Q Consensus       277 ~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~-----------~~~~~-~~~~~~~~  341 (422)
                      .+.|+||.-|-+|-|+||.++. +++.+++.+...  ..+++.=+|.-+..+|+.           .+..+ -++.++++
T Consensus       188 MLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~R  267 (363)
T PF04864_consen  188 MLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRER  267 (363)
T ss_dssp             EEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHH
T ss_pred             EEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHH
Confidence            8999999999999999999985 567777765543  466777777777766652           13566 78888999


Q ss_pred             HHHHHHHHccCCCCc--------------ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEEec
Q 014594          342 RERLFKLLKDVPFLN--------------PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVG  406 (422)
Q Consensus       342 ~~~l~~~L~~~~~~~--------------~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~-~~~~~iRis~~  406 (422)
                      .++|.+.+..-+-..              +......|.|++.... +.++..+.|++.||..+.|..+ ....++|||+-
T Consensus       268 W~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~e-ed~DC~~~l~~~~I~tr~G~~fga~~ryVRlSml  346 (363)
T PF04864_consen  268 WEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCERE-EDEDCYAVLREAKIITRSGVLFGADSRYVRLSML  346 (363)
T ss_dssp             HHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSC-GGSSHHHHHHCTTEEEEEGGGGTS-TTEEEEESS
T ss_pred             HHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCc-ccccHHHHHHhCCcccCCCCccCCCCCeEEEecc
Confidence            999999987643111              1223456999999632 2345667777999999998874 45689999976


Q ss_pred             C-hhhHHHHHHHHh
Q 014594          407 K-PEHTDALMECLM  419 (422)
Q Consensus       407 ~-~~~~~~l~~al~  419 (422)
                      . .++.+.|.+-|.
T Consensus       347 ~~~d~Fd~l~~rL~  360 (363)
T PF04864_consen  347 KRDDDFDQLLERLS  360 (363)
T ss_dssp             S-HHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHH
Confidence            5 444455555444

Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.

>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.71  E-value=6.9e-15  Score=139.00  Aligned_cols=215  Identities=19%  Similarity=0.153  Sum_probs=163.7

Q ss_pred             CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEecCC
Q 014594          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRK  200 (422)
Q Consensus       125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~  200 (422)
                      ++++|....+++.+++..|.  .+.++.++|..|+..++..++..|+.|++....|.....    ....+|++...++. 
T Consensus        73 r~~nPt~~~le~~iaal~ga--~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~-  149 (409)
T KOG0053|consen   73 RSGNPTRDVLESGIAALEGA--AHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV-  149 (409)
T ss_pred             cCCCCchHHHHHHHHHHhCC--ceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech-
Confidence            34566678899999999985  458888999999999999999999999999999975443    34457888887763 


Q ss_pred             CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (422)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~  279 (422)
                          -|++++++++. +++++|++.+|.||+..+.+.+++.++++. |+++|+|+.+.....- .++    ..+.+|++.
T Consensus       150 ----~~~~~~~~~i~-~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~-~pL----~lGADIV~h  219 (409)
T KOG0053|consen  150 ----DDLKKILKAIK-ENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQ-DPL----PLGADIVVH  219 (409)
T ss_pred             ----hhHHHHHHhhc-cCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCccccc-Chh----hcCCCEEEE
Confidence                35789999997 589999999999999999999999999998 9999999999854321 111    234569999


Q ss_pred             cChhhhcccc-ccceeeecC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC
Q 014594          280 TFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF  354 (422)
Q Consensus       280 S~SK~~~~~G-~r~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~  354 (422)
                      |.+|.+|..+ +=.|.++.+ +++.+++...+..  ++++++.......-|   ..+. +.++..++...+.+.|+..+.
T Consensus       220 SaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rgl---ktl~lRi~~~~ena~~~A~~Le~~~~  296 (409)
T KOG0053|consen  220 SATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSRGL---KTLHLRINKHSENALKIALLLEAHPK  296 (409)
T ss_pred             eeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHhcCc---chhhhhHHHHHHHHHHHHHHhhhCCc
Confidence            9999876322 446777775 8888888876654  667776655433333   3344 666677777777788877654


Q ss_pred             C
Q 014594          355 L  355 (422)
Q Consensus       355 ~  355 (422)
                      +
T Consensus       297 v  297 (409)
T KOG0053|consen  297 V  297 (409)
T ss_pred             e
Confidence            4

>PRK06149 hypothetical protein; Provisional

Probab=99.70  E-value=6.5e-15  Score=159.27  Aligned_cols=324  Identities=15%  Similarity=0.126  Sum_probs=204.6

Q ss_pred             CCCCCCeEEcCCCCCCCC-CCHHHHHHHhc-CC---CCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594           91 GRKPEDIVKIDANENPYG-PPPEVREALGQ-LK---FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~~~~-~~~~v~~al~~-~~---~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~  165 (422)
                      ..+++.++|+.++...++ .+|+|.+++.+ +.   ...+|..+...+|.++|++.+.-..+.++++++|++|++.+++.
T Consensus       581 D~dG~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~~~~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~Alkl  660 (972)
T PRK06149        581 DMAGRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNTNSRFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRL  660 (972)
T ss_pred             eCCCCEEEECCCCccccCCCCHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHH
Confidence            345788999988876666 78999988865 22   22223333456788888888753346899999999999999983


Q ss_pred             h--cCCCCEEEEcCCCchhHHHHHHHc-C-----C--------EEEEecCCCC----CC-CC-----HHHHHHHhh----
Q 014594          166 V--LDPGDKIVDCPPTFTMYEFDAAVN-G-----A--------AVVKVPRKSD----FS-LN-----VELIADAVE----  215 (422)
Q Consensus       166 l--~~~gd~Vl~~~p~y~~~~~~~~~~-g-----~--------~~~~v~~~~~----~~-~d-----~~~l~~~i~----  215 (422)
                      .  .....+|+...-+|++....+... +     .        .+..++..+.    |. .|     .+.+++.++    
T Consensus       661 Ar~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  740 (972)
T PRK06149        661 AWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDA  740 (972)
T ss_pred             HHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhh
Confidence            2  122356888888887544222110 0     0        1222322111    11 12     234333332    


Q ss_pred             -cCCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchh---hhhhcCCcEEEEccChhhhc
Q 014594          216 -REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM---EWVKKHDNLIVLRTFSKRAG  286 (422)
Q Consensus       216 -~~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~---~~~~~~~~~i~~~S~SK~~~  286 (422)
                       ..++.+|++.......|.+.+    .+++.++|+. |+++|+||++..|...+...   ...+-.++++   +++|.+|
T Consensus       741 ~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv---t~gK~lg  817 (972)
T PRK06149        741 SGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII---TMAKGMG  817 (972)
T ss_pred             cCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE---Eeccccc
Confidence             145778888776766788887    6777778877 99999999998876444321   1122223333   6799998


Q ss_pred             cccccceeeecCHHHHHHHHH---hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCcccC
Q 014594          287 LAGLRVGYGAFPLSIIEYLWR---AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPYP  359 (422)
Q Consensus       287 ~~G~r~G~i~~~~~~~~~l~~---~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p  359 (422)
                       .|+.+|.+++++++.+.+..   ....++.|+++.+++.+.|+--+-.+..++.++.-+++.+.|++    .+.+....
T Consensus       818 -~G~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vr  896 (972)
T PRK06149        818 -NGHPLGAVITRREIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLIGAVH  896 (972)
T ss_pred             -CCeeeEEEEEcHHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEe
Confidence             78999999999999887753   12346778998888888875311001444555555555555543    45444456


Q ss_pred             CCceEEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          360 SYSNFILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       360 ~~~~f~~~~~~~~--------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      ..|.|+-+++...        .....+.+.|+++||.+.+...  ..+.+||...   +.++.+++.+++++
T Consensus       897 G~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g~--~~~vl~~~Ppl~it~~~id~~~~~l~~  966 (972)
T PRK06149        897 GMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTGD--HLNILKIKPPLCLDRESADFFVDMLDR  966 (972)
T ss_pred             ecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeecCC--CCCEEEEECCCcCCHHHHHHHHHHHHH
Confidence            7788888877311        1145678888899999987532  2478999865   45555555555543

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.70  E-value=3.9e-14  Score=140.47  Aligned_cols=318  Identities=14%  Similarity=0.092  Sum_probs=198.3

Q ss_pred             CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594           91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~  164 (422)
                      ..+++.+||+..+..  .+ ..+|++.+++.+ +...  ..++.+...++.++|.+... ..+.+++++++++|++.+++
T Consensus        49 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~la~~l~~~~p-~~~~v~f~~sGseA~e~Alk  127 (428)
T PRK12389         49 DVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGTPTELEIEFAKMLKEAIP-SLEKVRFVNSGTEAVMTTIR  127 (428)
T ss_pred             eCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCccCCCCHHHHHHHHHHHHhCC-CCcEEEEeCCHHHHHHHHHH
Confidence            346788999977743  23 357889888876 3221  23455556678888887765 34689999999999999999


Q ss_pred             Hhc--CCCCEEEEcCCCchhHHHHHHH-cCCEEEE--------ec--CCCC----CCCCHHHHHHHhhc--CCCeEEEEe
Q 014594          165 CVL--DPGDKIVDCPPTFTMYEFDAAV-NGAAVVK--------VP--RKSD----FSLNVELIADAVER--EKPKCIFLT  225 (422)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~--------v~--~~~~----~~~d~~~l~~~i~~--~~~~~i~l~  225 (422)
                      .-.  ....+|+....+|++....+.. .|.....        ++  ...+    ...|++.+++.+.+  .++.+|++.
T Consensus       128 lAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~E  207 (428)
T PRK12389        128 VARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVE  207 (428)
T ss_pred             HHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEe
Confidence            432  2236788888888765443322 2211110        00  0000    01278899888853  357788888


Q ss_pred             CCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceeeecC
Q 014594          226 SPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (422)
Q Consensus       226 ~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~  298 (422)
                      ......|.+.+    .+++.++|+. |+++|+||++..|. ....  ....+..+++   -+++|.++ .|+.+|.++++
T Consensus       208 Pv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~R-t~~~~a~~~~gv~PDi---vt~gK~lg-gG~Pi~av~~~  282 (428)
T PRK12389        208 PIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFR-FMYGGAQDLLGVEPDL---TALGKIIG-GGLPIGAYGGR  282 (428)
T ss_pred             CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccc-cCcchhhHHhCCCCCe---eeechhhc-CCCceeEEeEH
Confidence            77787898887    6777888876 99999999999873 2211  1122222333   36799997 78999999999


Q ss_pred             HHHHHHHHH-----hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCc-ccCCCceEEEEE
Q 014594          299 LSIIEYLWR-----AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLN-PYPSYSNFILCE  368 (422)
Q Consensus       299 ~~~~~~l~~-----~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~-~~p~~~~f~~~~  368 (422)
                      +++.+.+..     ....|+.|+++.+++.+.|+.-+-.+..++.+++-+++.+.|++    ++.+. +....+ ++.+.
T Consensus       283 ~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g-~~gi~  361 (428)
T PRK12389        283 KDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHGITITINRLKG-ALTVY  361 (428)
T ss_pred             HHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc-EEEEE
Confidence            999888742     12346788998888888876311101444555555555555543    45332 223344 33344


Q ss_pred             eCC-CC---------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014594          369 VTS-GM---------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM  419 (422)
Q Consensus       369 ~~~-~~---------~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~  419 (422)
                      +.. ..         +   ...+.+.|.++||.+.+...    +.+.+++. +.++++++.++++
T Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----~~~~~~l~~t~e~id~~~~~l~  422 (428)
T PRK12389        362 FTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSKY----EAWFLTTAHTEEDIEETLEAVD  422 (428)
T ss_pred             EeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCCC----CCeeecCCCCHHHHHHHHHHHH
Confidence            421 10         1   35677888899999987532    23445544 3444555555554

>PRK07482 hypothetical protein; Provisional

Probab=99.70  E-value=1.4e-14  Score=144.69  Aligned_cols=318  Identities=14%  Similarity=0.101  Sum_probs=197.3

Q ss_pred             CCCCCCeEEcCCCCCC--C-CCCHHHHHHHhc-CCCC---C---CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594           91 GRKPEDIVKIDANENP--Y-GPPPEVREALGQ-LKFP---Y---IYPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~~--~-~~~~~v~~al~~-~~~~---~---~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~  160 (422)
                      +.+++.+||+.++...  + ..+|++.+++.+ +...   +   .++.....+|-+.|++....+.+.+++++++++|++
T Consensus        46 D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve  125 (461)
T PRK07482         46 DAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANE  125 (461)
T ss_pred             ECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHH
Confidence            4567889999887432  2 357888888876 3221   1   233334567777787776544578999999999999


Q ss_pred             HHHHHhc------C-C-CCEEEEcCCCchhHHHHHHH-cC------------CEEEEecCCCCCC-------------CC
Q 014594          161 LIMRCVL------D-P-GDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS-------------LN  206 (422)
Q Consensus       161 ~~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~-------------~d  206 (422)
                      .+++...      . + ..+|+....+|++....+.. .|            ..+..++....+.             .+
T Consensus       126 ~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  205 (461)
T PRK07482        126 TQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYC  205 (461)
T ss_pred             HHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHH
Confidence            9999542      1 2 25788888889765433221 11            0112222111000             13


Q ss_pred             HHHHHHHhhc---CCCeEEEEeCCCCccCcCCC-HHHH---HHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEE
Q 014594          207 VELIADAVER---EKPKCIFLTSPNNPDGSIIN-DEDL---LKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLI  276 (422)
Q Consensus       207 ~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~-~e~l---~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i  276 (422)
                      ++.+++.+.+   +++.+|++.......|.+.+ .+-+   ++||+. |+++|.||++..|...+..  ....+..++++
T Consensus       206 ~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv  285 (461)
T PRK07482        206 ADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLI  285 (461)
T ss_pred             HHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEE
Confidence            5777877742   45788888876666787754 4444   445555 9999999999988643322  22222334444


Q ss_pred             EEccChhhhccccc-cceeeecCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHccC---ChHHHHHHHHHHHHH
Q 014594          277 VLRTFSKRAGLAGL-RVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQN---PIYLEVKEALIKERE  343 (422)
Q Consensus       277 ~~~S~SK~~~~~G~-r~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~  343 (422)
                      +   ++|.++ .|+ .+|.+++.+++.+.+..         ...+|+.|+++.+++.+.|+.   ++   ..++.++..+
T Consensus       286 ~---~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~---l~~~~~~~g~  358 (461)
T PRK07482        286 T---VAKGLT-SAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILEREN---LVGNAAEVGA  358 (461)
T ss_pred             E---Eccccc-cCccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHH
Confidence            3   589987 675 89999999998877652         223477899999888888753   23   3344445555


Q ss_pred             HHHHHH----ccCCCCcccCCCceEEEEEeCCC------CC-----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--
Q 014594          344 RLFKLL----KDVPFLNPYPSYSNFILCEVTSG------MD-----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--  406 (422)
Q Consensus       344 ~l~~~L----~~~~~~~~~p~~~~f~~~~~~~~------~~-----~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--  406 (422)
                      ++.+.|    ++++.+.-....|.++.+++...      .+     ...+...+.++||++++..   ..+.+|+..+  
T Consensus       359 ~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~---~~~~i~~~Ppl~  435 (461)
T PRK07482        359 YFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAMP---HGDILGFAPPLV  435 (461)
T ss_pred             HHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecCC---CCCEEEEeCCCC
Confidence            555555    44554433456777777877421      11     3567788889999987532   1368999855  


Q ss_pred             -ChhhHHHHHHHH
Q 014594          407 -KPEHTDALMECL  418 (422)
Q Consensus       407 -~~~~~~~l~~al  418 (422)
                       +.++++++.+++
T Consensus       436 it~~ei~~~~~~l  448 (461)
T PRK07482        436 LTRAEADEIVAIA  448 (461)
T ss_pred             CCHHHHHHHHHHH
Confidence             344444444443

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.70  E-value=1.9e-14  Score=142.11  Aligned_cols=319  Identities=12%  Similarity=0.124  Sum_probs=197.5

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CC---CCC--CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~---~~~--~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      ..+++.++|+..+.  ..+ ..+|++.+++.+ +.   +..  .+..+...+|.+.|++..+-..+.+++++++++|++.
T Consensus        36 D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~  115 (422)
T PRK05630         36 LEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEV  115 (422)
T ss_pred             ECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHH
Confidence            34678899998763  333 357888888875 22   111  1233345678888888765334699999999999999


Q ss_pred             HHHHhcC-------CC-CEEEEcCCCchhHHHHHHH-cCC-------------EEEEecCCCCCCCC-------HHHHHH
Q 014594          162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSDFSLN-------VELIAD  212 (422)
Q Consensus       162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~~~d-------~~~l~~  212 (422)
                      +++.-..       ++ .+|+....+|++....+.. .+.             ....+|.......+       .+.+++
T Consensus       116 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  195 (422)
T PRK05630        116 AIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLEL  195 (422)
T ss_pred             HHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHH
Confidence            9984321       23 5789999999764433322 111             12223322111112       234555


Q ss_pred             HhhcCCCeEEEEeCC-CCccCcCCC-HHH---HHHHHcC-CCeEEEccCCccccCCCchhh--hhhcCCcEEEEccChhh
Q 014594          213 AVEREKPKCIFLTSP-NNPDGSIIN-DED---LLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKR  284 (422)
Q Consensus       213 ~i~~~~~~~i~l~~p-~NPtG~~~~-~e~---l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~~~S~SK~  284 (422)
                      .+. +++.+|++... +.-.|...+ .+-   ++++|+. |+++|+||++..|...+....  ..+..++++   +++|.
T Consensus       196 ~~~-~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~---t~gK~  271 (422)
T PRK05630        196 LID-ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIM---CVGKA  271 (422)
T ss_pred             HHh-hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCee---eeech
Confidence            554 57888888863 666777654 444   4445555 999999999988754333211  122223333   67998


Q ss_pred             hcccc-ccceeeecCHHHHHHHHHh--------cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc---C
Q 014594          285 AGLAG-LRVGYGAFPLSIIEYLWRA--------KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD---V  352 (422)
Q Consensus       285 ~~~~G-~r~G~i~~~~~~~~~l~~~--------~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~---~  352 (422)
                      ++ .| ..+|++++++++.+.+...        ..+|+.++++.+++.++|+.-+-....++++++-+++.+.|++   .
T Consensus       272 l~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~~g~~l~~~L~~l~~~  350 (422)
T PRK05630        272 LT-GGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKRIEAELIAGLSPLAHL  350 (422)
T ss_pred             hh-cCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHhhcC
Confidence            86 56 4799999999998877531        3457788888888888775311001333445555555555543   3


Q ss_pred             CCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          353 PFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       353 ~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      +.+.-....|.++-+++....+...+.+.++++|+.+.+..     +.+||...   +++++|++.++++
T Consensus       351 ~~v~~vRg~Gl~~~ie~~~~~~~~~~~~~~~~~Gl~~~~~g-----~~l~~~PpL~it~~~i~~~~~~l~  415 (422)
T PRK05630        351 PGVADVRVLGAIGVVEMEQPVDMEEATQAAVDHGVWLRPFG-----RLVYVMPPYITTSEQIAQICAALA  415 (422)
T ss_pred             CCeeeeeccccEEEEEECCcccHHHHHHHHHHCCeEEEecC-----CEEEEECCccCCHHHHHHHHHHHH
Confidence            33332345688888888644456788889999999997742     68999975   4444555444443

>PRK05965 hypothetical protein; Provisional

Probab=99.70  E-value=1.3e-14  Score=144.75  Aligned_cols=320  Identities=15%  Similarity=0.125  Sum_probs=198.5

Q ss_pred             CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC---C---CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594           91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP---Y---IYPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~---~---~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~  160 (422)
                      ..+++.+||+..+..  .+ ..+|++.+++.+ +...   .   .++.+...+|.++|++....+.+.+++++++++|++
T Consensus        42 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve  121 (459)
T PRK05965         42 DASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVD  121 (459)
T ss_pred             ECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHH
Confidence            456788999977632  23 357888888876 2211   1   233334557888888876544568999999999999


Q ss_pred             HHHHHhc------C-CC-CEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCC----CCCC--------H
Q 014594          161 LIMRCVL------D-PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSD----FSLN--------V  207 (422)
Q Consensus       161 ~~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~----~~~d--------~  207 (422)
                      .+++...      . ++ .+|+....+|++....+.. .|.            .+..++....    +.-|        +
T Consensus       122 ~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (459)
T PRK05965        122 SAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASV  201 (459)
T ss_pred             HHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHH
Confidence            9998532      1 22 5799899999765432211 111            1122321110    1123        2


Q ss_pred             HHHHHHhhc---CCCeEEEEeCCCCccCcCCCH-HH---HHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEE
Q 014594          208 ELIADAVER---EKPKCIFLTSPNNPDGSIIND-ED---LLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV  277 (422)
Q Consensus       208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~-e~---l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~  277 (422)
                      +.+++.+.+   +++.+|++...+...|.+.+. +-   ++++|+. |+++|.||++..|...+..  ....+..++++ 
T Consensus       202 ~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv-  280 (459)
T PRK05965        202 AALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLM-  280 (459)
T ss_pred             HHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeE-
Confidence            567777752   467888888777777876644 33   3445555 9999999999988644432  12222234444 


Q ss_pred             EccChhhhcccc-ccceeeecCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHH
Q 014594          278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFK  347 (422)
Q Consensus       278 ~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~  347 (422)
                        +++|.++ .| +.+|.+++++++.+.+..         ...+|+.++++.+++.+.|+--+-.+..++.++.-+++.+
T Consensus       281 --~~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~  357 (459)
T PRK05965        281 --TVAKGLT-SGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAA  357 (459)
T ss_pred             --Eechhhc-cCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence              3589997 78 599999999999887742         2235778899988888887531100144455566666666


Q ss_pred             HHcc---CCCCcccCCCceEEEEEeCCCC-----------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chhh
Q 014594          348 LLKD---VPFLNPYPSYSNFILCEVTSGM-----------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEH  410 (422)
Q Consensus       348 ~L~~---~~~~~~~p~~~~f~~~~~~~~~-----------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~  410 (422)
                      .|++   .+.+.-....|.++.+++....           -...+.+.+.++||++++..    .+.+|+...   ++++
T Consensus       358 ~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g----~~~i~~~PpL~it~~e  433 (459)
T PRK05965        358 GLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRAFG----DGVLGFAPALCCTEGE  433 (459)
T ss_pred             HHHhhccCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEecC----CcEEEEECCCcCCHHH
Confidence            6654   3433334566777777763211           13467778889999998643    467999854   3444


Q ss_pred             HHHHHHHH
Q 014594          411 TDALMECL  418 (422)
Q Consensus       411 ~~~l~~al  418 (422)
                      ++++.+++
T Consensus       434 i~~~~~~l  441 (459)
T PRK05965        434 FDLIFERT  441 (459)
T ss_pred             HHHHHHHH
Confidence            44444444

>PRK07046 aminotransferase; Validated

Probab=99.70  E-value=4.7e-14  Score=140.32  Aligned_cols=312  Identities=15%  Similarity=0.128  Sum_probs=193.6

Q ss_pred             CCCCCCeEEcCCCCCC--C-CCCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594           91 GRKPEDIVKIDANENP--Y-GPPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~~--~-~~~~~v~~al~~-~~~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~  164 (422)
                      ..+++.+||+..+..+  + ..+|.+.+++.+ +..+  ..++.+...+|.+.|++..+  .+.+.+++++++|.+.+++
T Consensus        71 D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~~~~~~~~~~lAe~l~~~~~--~~~v~F~nSGtEA~e~Alr  148 (453)
T PRK07046         71 DVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTTMLPSEDAAWVGEELARRFG--LPYWQVATTATDANRFVLR  148 (453)
T ss_pred             eCCCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhC--CCEEEEECCHHHHHHHHHH
Confidence            4467889998776433  3 356888888876 3322  23344556678888888775  5799999999999999998


Q ss_pred             Hhc--CCCCEEEEcCCCchhHHHHHHH--cCCE-----------------EEEecCCCCCCCCHHHHHHHhhcCCCeEEE
Q 014594          165 CVL--DPGDKIVDCPPTFTMYEFDAAV--NGAA-----------------VVKVPRKSDFSLNVELIADAVEREKPKCIF  223 (422)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~--~g~~-----------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~  223 (422)
                      .-.  ...++|+....+|++....+..  .+.+                 +..++    | -|++.+++.+...+..+|+
T Consensus       149 lAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~-nd~~~l~~~l~~~~vAavi  223 (453)
T PRK07046        149 WARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE----F-NDLAALEAALADGDVAAVL  223 (453)
T ss_pred             HHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC----C-CCHHHHHHHhCCCCeEEEE
Confidence            432  2237799888888865322211  1110                 11111    1 2789999988656788888


Q ss_pred             EeCCCCccCcCCCH----HHHHHHHcC-CCeEEEccCCccccCC-CchhhhhhcCCcEEEEccChhhhccccccceeeec
Q 014594          224 LTSPNNPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGL-ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (422)
Q Consensus       224 l~~p~NPtG~~~~~----e~l~~i~~~-~~~li~Deay~~~~~~-~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~  297 (422)
                      +.......|.+.+.    ++++++|+. |+++|.||++. |..+ +......+..++++   +++|.+| .|+.+|.+++
T Consensus       224 ~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~~~~~gv~PDi~---t~gK~lg-gG~Pi~av~g  298 (453)
T PRK07046        224 AEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGYTRAHGLEPDFL---VVGKPIA-GGVPCAVYGF  298 (453)
T ss_pred             ECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcchhHHhCCCccce---eehhhhc-CCCcceeeee
Confidence            88666666777763    677777876 99999999997 4311 11112222223333   4789998 7899999999


Q ss_pred             CHHHHHHHHHh-----------cCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCc
Q 014594          298 PLSIIEYLWRA-----------KQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYS  362 (422)
Q Consensus       298 ~~~~~~~l~~~-----------~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~  362 (422)
                      ++++.+.+...           ...|+.++++.+++.+.|+   +++..+ ..+.-...++.|.+.+++.+........|
T Consensus       299 ~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G  378 (453)
T PRK07046        299 SAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVG  378 (453)
T ss_pred             hHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            99999887531           1246778888888888875   333333 33334444444444444455332222333


Q ss_pred             eEEEEEeC-C-CC---------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014594          363 NFILCEVT-S-GM---------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM  419 (422)
Q Consensus       363 ~f~~~~~~-~-~~---------~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~  419 (422)
                      ..+.+.+. + ..         +   ...+...|.++||.+.+..     +.++++.. +.++++++.++++
T Consensus       379 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~-----~~~~~~p~~t~~did~~~~~~~  445 (453)
T PRK07046        379 ARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITPFH-----NMMLVCPATTAADVDRLVAAFD  445 (453)
T ss_pred             cEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEeccc-----CcEEEeCCCCHHHHHHHHHHHH
Confidence            33444431 1 10         1   2345667779999998632     56788865 3444555555544

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=99.69  E-value=4.6e-15  Score=142.50  Aligned_cols=302  Identities=18%  Similarity=0.152  Sum_probs=182.2

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcC---CCCCCCCC------cc-hHH----HHHHHHHHcCCCCC----CEEEeCCHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQL---KFPYIYPD------PE-SRR----LRAALAKDSGLESD----HILVGCGADE  157 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~y~~------~~-~~~----lr~~la~~~~~~~~----~i~~~~G~~~  157 (422)
                      +.|.|-..||..  +|.+++++...   .+..+||.      .. ..+    .++.++++|+.+++    +|-. .+++.
T Consensus        21 ~~l~LiaSEN~~--Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp-~SGs~   97 (399)
T PF00464_consen   21 STLNLIASENYM--SPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQP-HSGSQ   97 (399)
T ss_dssp             HSEE-CTT-------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE----SSHHH
T ss_pred             cCccccCccccc--CHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeec-CCchH
Confidence            358888888876  57888888752   23233332      21 122    34555567898754    3333 45666


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCchhHH---HH--H-----HHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeC
Q 014594          158 LIDLIMRCVLDPGDKIVDCPPTFTMYE---FD--A-----AVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTS  226 (422)
Q Consensus       158 al~~~~~~l~~~gd~Vl~~~p~y~~~~---~~--~-----~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~  226 (422)
                      |...++.+|++|||+|+..++...++.   ..  .     .....+.+.++.+ ++..+|.+++++.+.+.+||+|++-.
T Consensus        98 An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~  177 (399)
T PF00464_consen   98 ANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGA  177 (399)
T ss_dssp             HHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-
T ss_pred             HHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECc
Confidence            888899999999999998887664332   11  1     1123467777755 66799999999999888999999764


Q ss_pred             CCCccCcCCCHHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecC------
Q 014594          227 PNNPDGSIINDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP------  298 (422)
Q Consensus       227 p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~------  298 (422)
                      -+  .-..++.+++++|++. |.+|+.|-+|.. +...+.....+ .+ -.++.+|..|++  +|-|.|.++.+      
T Consensus       178 S~--y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~-~~-ADvvt~sThKtl--~GPrggiI~~~~~~~~~  251 (399)
T PF00464_consen  178 SS--YPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPF-PY-ADVVTGSTHKTL--RGPRGGIILTNKGSKNV  251 (399)
T ss_dssp             SS--TSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GC-CT-SSEEEEESSGGG---SSS-EEEEES-SEEEE
T ss_pred             hh--ccCccCHHHHHHHHHhcCcEEEecccccccceehheecCcc-cc-ceEEEeeccccc--cccCceEEEEcCCcccc
Confidence            33  3366899999999997 999999999964 22112111111 22 348888999986  78899999999      


Q ss_pred             --------HHHHHHHHHhcCCCCC---cHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHccCCCCccc-CCCce
Q 014594          299 --------LSIIEYLWRAKQPYNV---SVAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKDVPFLNPY-PSYSN  363 (422)
Q Consensus       299 --------~~~~~~l~~~~~~~~~---~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~  363 (422)
                              +++.+++.+...|...   ..-..++...+|.   ..++.+..+++.++.+.|.+.|.+.|+..+. ..+..
T Consensus       252 ~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~~v~~ggTd~H  331 (399)
T PF00464_consen  252 DKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERGFKVVTGGTDNH  331 (399)
T ss_dssp             -TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-EEGGGS-SSS
T ss_pred             CCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCCcEEEECCCCCC
Confidence                    8899999887766432   1112222222232   2345457778889999999999998854443 24456


Q ss_pred             EEEEEeCC-CCCHHHHHHHHHhCCcEEEe----CCC-CCCCCeEEEEec
Q 014594          364 FILCEVTS-GMDAKKLKDDLAKMGVMIRH----YNN-KELKGYVRVSVG  406 (422)
Q Consensus       364 f~~~~~~~-~~~~~~~~~~L~~~gI~v~~----~~~-~~~~~~iRis~~  406 (422)
                      .+|+++.. +.+..++.+.|.+.||.+..    ++. +.....|||+..
T Consensus       332 ~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~  380 (399)
T PF00464_consen  332 QVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTP  380 (399)
T ss_dssp             EEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESH
T ss_pred             eEEEEecccccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCH
Confidence            78899853 57888888999999999963    332 233578999964

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>PRK04311 selenocysteine synthase; Provisional

Probab=99.69  E-value=5.6e-14  Score=139.25  Aligned_cols=300  Identities=19%  Similarity=0.152  Sum_probs=197.0

Q ss_pred             CCHHHHHHHhcCCCCC---CC--C--Ccc--hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 014594          109 PPPEVREALGQLKFPY---IY--P--DPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT  179 (422)
Q Consensus       109 ~~~~v~~al~~~~~~~---~y--~--~~~--~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~  179 (422)
                      .++++.+++.+....+   .|  .  ..+  +..+++.+++++|.+  +.+++++++.++..++.. +.+||+|+++...
T Consensus        98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Gae--~a~vv~sgtaAl~l~l~~-l~~GdeVIvs~~e  174 (464)
T PRK04311         98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGAE--DALVVNNNAAAVLLALNA-LAAGKEVIVSRGE  174 (464)
T ss_pred             CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHH-hCCCCEEEEcchh
Confidence            4688888887632111   11  1  112  468999999999964  577888888999988875 5889999998764


Q ss_pred             chh------HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCc--cC--cCCCHHHHHHHHcC-CC
Q 014594          180 FTM------YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNP--DG--SIINDEDLLKILEM-PI  248 (422)
Q Consensus       180 y~~------~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NP--tG--~~~~~e~l~~i~~~-~~  248 (422)
                      +..      .....+..|++++.++.++  ..++++++++++ +++++|+++|++||  +|  ...+.+++.++++. |+
T Consensus       175 ~~~~ggs~~i~~~~~~~G~~l~~v~~~~--~t~~~dle~aI~-~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi  251 (464)
T PRK04311        175 LVEIGGAFRIPDVMRQAGARLVEVGTTN--RTHLRDYEQAIN-ENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGL  251 (464)
T ss_pred             hhhcCcchhhHHHHHHCCcEEEEECCCC--CCCHHHHHHhcC-ccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCC
Confidence            431      2334567899999998532  357999999997 78999999999998  34  67899999999987 99


Q ss_pred             eEEEccCCcccc----C---CCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh--cCCCCCcHHHH
Q 014594          249 LVVLDEAYTEFS----G---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAE  319 (422)
Q Consensus       249 ~li~Deay~~~~----~---~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~--~~~~~~~~~~~  319 (422)
                      ++|+|.+...+.    +   ...........+.++++.|.+|.+|.+  ..|++++++++++++.+.  ...+.+.....
T Consensus       252 ~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp--~~G~i~g~~~li~~l~~~~~~r~lr~dk~~l  329 (464)
T PRK04311        252 PVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP--QAGIIVGKKELIARLKKHPLKRALRVDKLTL  329 (464)
T ss_pred             eEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC--ceEEEEEcHHHHHHHhhchhHHHHhcchHHH
Confidence            999999643221    1   011111222356679999999987634  489999999999877631  12233333333


Q ss_pred             HHHHHHcc-----CChH--------HH-HHHHHHHHHHHHHHHHccCC--CC--cccCC-----Cc-------eEEEEEe
Q 014594          320 VAACAALQ-----NPIY--------LE-VKEALIKERERLFKLLKDVP--FL--NPYPS-----YS-------NFILCEV  369 (422)
Q Consensus       320 ~aa~~~L~-----~~~~--------~~-~~~~~~~~~~~l~~~L~~~~--~~--~~~p~-----~~-------~f~~~~~  369 (422)
                      .+..++|.     +..|        +. ..+++.++.+.+.+.|+...  ..  .+.+.     +|       .-..+.+
T Consensus       330 ~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~  409 (464)
T PRK04311        330 AALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTL  409 (464)
T ss_pred             HHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEE
Confidence            33333433     1112        22 44677788889999997753  11  22221     11       1122333


Q ss_pred             C-CCCCHHHHHHHHHhC--CcEEEeCCCCCCCCeEEEEecC--hhhHHHHHHHHhhh
Q 014594          370 T-SGMDAKKLKDDLAKM--GVMIRHYNNKELKGYVRVSVGK--PEHTDALMECLMHL  421 (422)
Q Consensus       370 ~-~~~~~~~~~~~L~~~--gI~v~~~~~~~~~~~iRis~~~--~~~~~~l~~al~~l  421 (422)
                      . ++.+..++.+.|++.  .|+.+-.     ++.+.+-+.+  +.+.+.+.++++.+
T Consensus       410 ~~~~~~~~~l~~~lr~~~~~i~~r~~-----~~~~~ld~r~~~~~~~~~~~~~~~~~  461 (464)
T PRK04311        410 TPKDRSLEALAARLRLLPPPVIGRIE-----DGRLLLDLRTLEEEDEERLAAALLEA  461 (464)
T ss_pred             eCCCCCHHHHHHHHhcCCCCEEEEEE-----CCEEEEEeCcCCHHHHHHHHHHHHHH
Confidence            2 356889999999864  4555533     4777777754  45667777777654

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=99.69  E-value=3.8e-14  Score=141.34  Aligned_cols=321  Identities=14%  Similarity=0.151  Sum_probs=197.3

Q ss_pred             CCCCCCeEEcCCC-CCCCC-CCHHHHHHHhc-CC---CC-CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           91 GRKPEDIVKIDAN-ENPYG-PPPEVREALGQ-LK---FP-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        91 ~~~~~~~i~l~~~-~~~~~-~~~~v~~al~~-~~---~~-~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      ..+++.+||+..+ ...++ .+|+|.+++.+ +.   +. ..|+.+...+|.++|++.++-..+.+++++++++|++.++
T Consensus        68 D~dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~Al  147 (459)
T PRK06082         68 DVDGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPFSPRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMAL  147 (459)
T ss_pred             ECCCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCCccCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHH
Confidence            3467889998633 23344 67889888875 22   11 2345555678888888888643468999999999999999


Q ss_pred             HHhc--CCCCEEEEcCCCchhHHHHHH-HcCCE------------EEEecCCCC----CC-CC------HHHHHHHhhc-
Q 014594          164 RCVL--DPGDKIVDCPPTFTMYEFDAA-VNGAA------------VVKVPRKSD----FS-LN------VELIADAVER-  216 (422)
Q Consensus       164 ~~l~--~~gd~Vl~~~p~y~~~~~~~~-~~g~~------------~~~v~~~~~----~~-~d------~~~l~~~i~~-  216 (422)
                      +...  ....+|+....+|+.....+. ..|..            +..+|....    +. .|      ++.+++.+.+ 
T Consensus       148 klAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~  227 (459)
T PRK06082        148 KLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE  227 (459)
T ss_pred             HHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC
Confidence            8432  223678888888876543332 22211            222331111    11 11      3557777742 


Q ss_pred             CCCeEEEEeCCCCccCcCCC---HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhcccc-
Q 014594          217 EKPKCIFLTSPNNPDGSIIN---DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG-  289 (422)
Q Consensus       217 ~~~~~i~l~~p~NPtG~~~~---~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G-  289 (422)
                      .++.+|++....+..+.+.+   .++++++|+. |+++|.||++..|...+..  ....+..++++   +++|.++ .| 
T Consensus       228 ~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv---~~gKgl~-gG~  303 (459)
T PRK06082        228 GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDIL---CIGKGLG-GGL  303 (459)
T ss_pred             CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCCEE---Eeccccc-CCC
Confidence            35778888766665444566   3566666765 9999999999987543322  12222233333   3799998 66 


Q ss_pred             ccceeeecCHHHHHHHHH--hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCcccCCCce
Q 014594          290 LRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPYPSYSN  363 (422)
Q Consensus       290 ~r~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~  363 (422)
                      +.+|.+++++++.+....  ....|+.++++.+++.+.|+.-+-.+..++.+++-++|.+.|++    ++.+.-....|.
T Consensus       304 ~P~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl  383 (459)
T PRK06082        304 VPIAAMITKDKYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGL  383 (459)
T ss_pred             CcceEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccc
Confidence            589999999887654321  12357788888888888875311001444555555555555544    454333456777


Q ss_pred             EEEEEeCCCC-----C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          364 FILCEVTSGM-----D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       364 f~~~~~~~~~-----~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      ++.+++....     +   ...+...+.++||++.+..    .+.+|++..   +.++++++.++++
T Consensus       384 ~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~----~~~i~~~Ppl~it~~eid~~~~~l~  446 (459)
T PRK06082        384 LWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVSQ----GNVIQLSPPLIITREELTQALAILE  446 (459)
T ss_pred             eeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEecC----CCEEEEeCCCccCHHHHHHHHHHHH
Confidence            8777774211     1   3466777889999998743    478999965   4455555555444

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.69  E-value=2e-14  Score=142.16  Aligned_cols=320  Identities=13%  Similarity=0.148  Sum_probs=200.1

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CC---CCC--CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~---~~~--~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      ..+++.++|+..+.  ..+ ..+|++.+++.+ +.   +..  .|..+...+|.++|++......+.+++++++++|++.
T Consensus        40 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~  119 (429)
T PRK06173         40 LKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEV  119 (429)
T ss_pred             cCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHH
Confidence            34678899997763  233 356888888765 22   111  2344455678888888775445699999999999999


Q ss_pred             HHHHhcC-------CC-CEEEEcCCCchhHHHHHHH-cCC-------------EEEEecCCCC-CC-----CCHHHHHHH
Q 014594          162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSD-FS-----LNVELIADA  213 (422)
Q Consensus       162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~-~~-----~d~~~l~~~  213 (422)
                      +++....       +| .+|+....+|++....+.. .|.             .+..+|.... +.     -+++.+++.
T Consensus       120 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~  199 (429)
T PRK06173        120 AMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDL  199 (429)
T ss_pred             HHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHH
Confidence            9985321       33 5688888888764322211 110             1122221110 10     136667777


Q ss_pred             hhc--CCCeEEEEeCC-CCccCcC-CCHHHHHHH---HcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChh
Q 014594          214 VER--EKPKCIFLTSP-NNPDGSI-INDEDLLKI---LEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSK  283 (422)
Q Consensus       214 i~~--~~~~~i~l~~p-~NPtG~~-~~~e~l~~i---~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK  283 (422)
                      +.+  +++.+|++... +.-.|.. .+.+-+.++   |+. |+++|+||++..|...+..  ....+..++ ++  +|+|
T Consensus       200 i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD-iv--~~gK  276 (429)
T PRK06173        200 LEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPD-IM--CIGK  276 (429)
T ss_pred             HHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCC-EE--Eeeh
Confidence            742  46788888864 6767776 455555554   444 9999999999877543332  122222233 33  3899


Q ss_pred             hhcccc-ccceeeecCHHHHHHHHH-------hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC---
Q 014594          284 RAGLAG-LRVGYGAFPLSIIEYLWR-------AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV---  352 (422)
Q Consensus       284 ~~~~~G-~r~G~i~~~~~~~~~l~~-------~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~---  352 (422)
                      .++ .| +.++.+++++++.+.+..       ...+|..++++.+++.++|+.-+-.+..++.+++.+++.+.|+++   
T Consensus       277 ~l~-gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~  355 (429)
T PRK06173        277 ALT-GGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQRIEAQLKQELAPAAEF  355 (429)
T ss_pred             hhh-CCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhcC
Confidence            987 77 478889999999887742       223466788888888888753110014556666666777766643   


Q ss_pred             CCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHHHHHHHHh
Q 014594          353 PFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTDALMECLM  419 (422)
Q Consensus       353 ~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~~l~~al~  419 (422)
                      +.+.-....|.++.+.+....+...+.+.|.++||.+.+..     +.+||....   .++.+++.++++
T Consensus       356 ~~v~~vRg~Gl~~~iel~~~~~~~~i~~~l~e~Gi~v~~~g-----~~l~~~Ppl~it~~ei~~~~~~l~  420 (429)
T PRK06173        356 DSVAEVRVLGAIGVVEMKEPVNMATLQPRFVEHGIWVRPFG-----KLVYIMPPFIISPDELSQLTSGLL  420 (429)
T ss_pred             CCeeeeeccceEEEEEeCCcccHHHHHHHHHHCCeEEEecC-----CEEEEeCCccCCHHHHHHHHHHHH
Confidence            22211235677777888654456788999999999998753     589999763   444444444443

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.69  E-value=1.2e-14  Score=135.06  Aligned_cols=315  Identities=18%  Similarity=0.198  Sum_probs=209.4

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhc-C--CCCCCCC------Ccch-H----HHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQ-L--KFPYIYP------DPES-R----RLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~--~~~~~y~------~~~~-~----~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      +.|.|=..||-.  ++.|++++.. +  .+..+||      ...+ .    -..+...++||.+..+|-..+|++ |...
T Consensus        27 ~~ieLIASEN~~--S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~-AN~a  103 (413)
T COG0112          27 EHIELIASENFT--SPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQ-ANQA  103 (413)
T ss_pred             hceeeeeccccC--CHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchH-HHHH
Confidence            458888888865  5889998865 2  2333343      2222 1    234445567898888999888877 5556


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHH---HHcCC--EEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGA--AVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (422)
                      ++.++++|||+|+-.+..+.++....   ...|.  +++.++.+ ++..+|.|++++.+.+.+||+|+.-  .+---..+
T Consensus       104 v~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G--~SaY~r~i  181 (413)
T COG0112         104 VYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAG--GSAYSRPI  181 (413)
T ss_pred             HHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHhCCCEEEEC--cccccccc
Confidence            66779999999997776665432211   11233  45555655 5578999999999988999999853  22244778


Q ss_pred             CHHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCH-HHHHHHHHhcCCC
Q 014594          236 NDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPY  312 (422)
Q Consensus       236 ~~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~~l~~~~~~~  312 (422)
                      +.+++++|++. |.++++|.+|.. +...+.....+ . ...++..|.+|.+  .|-|.|.|+++. ++.+++.+.-.|.
T Consensus       182 d~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~-~-~AdvVTtTTHKTl--rGPrGG~Il~~~eel~kkin~aVFPg  257 (413)
T COG0112         182 DFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPL-P-HADVVTTTTHKTL--RGPRGGIILTNDEELAKKINSAVFPG  257 (413)
T ss_pred             CHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCC-C-ccceEeCCcccCC--CCCCceEEEeccHHHHHHhhhhcCCc
Confidence            99999999998 999999999964 22222111111 1 1348889999985  788999999985 8888888876664


Q ss_pred             CC-cHHHHHHH--HHHcc---CChHHHHHHHHHHHHHHHHHHHccCCCCcccCC-CceEEEEEeC-CCCCHHHHHHHHHh
Q 014594          313 NV-SVAAEVAA--CAALQ---NPIYLEVKEALIKERERLFKLLKDVPFLNPYPS-YSNFILCEVT-SGMDAKKLKDDLAK  384 (422)
Q Consensus       313 ~~-~~~~~~aa--~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~-~~~f~~~~~~-~~~~~~~~~~~L~~  384 (422)
                      .. ++.....+  ..++.   .+++.+-.+++.++.+.|.+.|.+.|+..+... +...+.+++. .+.+..+....|.+
T Consensus       258 ~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgTdnHl~lVDl~~~~~~Gk~ae~~L~~  337 (413)
T COG0112         258 LQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGTDNHLVLVDLRSKGLTGKKAEAALER  337 (413)
T ss_pred             cCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCCccceEEEEEcccCCCCHHHHHHHHHH
Confidence            33 22221111  12222   235545677788999999999999875444322 2234567775 35677888888889


Q ss_pred             CCcEEE----eCCC--CCCCCeEEEEec-------ChhhHHHHHHHHh
Q 014594          385 MGVMIR----HYNN--KELKGYVRVSVG-------KPEHTDALMECLM  419 (422)
Q Consensus       385 ~gI~v~----~~~~--~~~~~~iRis~~-------~~~~~~~l~~al~  419 (422)
                      .||.+.    |++.  +..+..|||...       .+.+++++.+.+.
T Consensus       338 ~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~  385 (413)
T COG0112         338 AGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIA  385 (413)
T ss_pred             cCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHH
Confidence            999996    4443  345678999853       2445666655544

>PRK12403 putative aminotransferase; Provisional

Probab=99.69  E-value=4.6e-14  Score=140.86  Aligned_cols=320  Identities=15%  Similarity=0.122  Sum_probs=194.1

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCC-C--CC---CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKF-P--YI---YPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~-~--~~---y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~  160 (422)
                      ..+++.+||+..+.  ..+ ..+|++.+++.+ +.. .  ..   ++.+...+|.++|+++++...+.+++++++++|++
T Consensus        50 D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e  129 (460)
T PRK12403         50 DNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSEANE  129 (460)
T ss_pred             eCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence            45677899987663  223 356888888876 321 1  11   12233567888888888644478999999999999


Q ss_pred             HHHHHhc-------CCCC-EEEEcCCCchhHHHHH-HHcCCE-----------EEEecCCCC----CCC--------CHH
Q 014594          161 LIMRCVL-------DPGD-KIVDCPPTFTMYEFDA-AVNGAA-----------VVKVPRKSD----FSL--------NVE  208 (422)
Q Consensus       161 ~~~~~l~-------~~gd-~Vl~~~p~y~~~~~~~-~~~g~~-----------~~~v~~~~~----~~~--------d~~  208 (422)
                      .+++...       ++++ .|+....+|++....+ ...|..           +..+|....    +..        +.+
T Consensus       130 ~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  209 (460)
T PRK12403        130 VLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAAL  209 (460)
T ss_pred             HHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHH
Confidence            9999653       2333 3556666776543322 222211           223331110    011        134


Q ss_pred             HHHHHhhc---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEE
Q 014594          209 LIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVL  278 (422)
Q Consensus       209 ~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~  278 (422)
                      .+++.+.+   +++.+|++.......|.+.+    .+++++||+. |+++|+||++..|...+...  ...+-.++++  
T Consensus       210 ~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv--  287 (460)
T PRK12403        210 QLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTL--  287 (460)
T ss_pred             HHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeE--
Confidence            56665532   45678888877777888887    7788888887 99999999998876443321  2222233333  


Q ss_pred             ccChhhhccccc-cceeeecCHHHHHHHHH------hcCCCCCcHHHHHHHHHHccC---ChHHH-HH-HHHHHHHHHHH
Q 014594          279 RTFSKRAGLAGL-RVGYGAFPLSIIEYLWR------AKQPYNVSVAAEVAACAALQN---PIYLE-VK-EALIKERERLF  346 (422)
Q Consensus       279 ~S~SK~~~~~G~-r~G~i~~~~~~~~~l~~------~~~~~~~~~~~~~aa~~~L~~---~~~~~-~~-~~~~~~~~~l~  346 (422)
                       +++|.++ .|. .+|.+++++++.+.+..      ...+|+.++++.+++.+.|+.   ++..+ .+ +.-...++.|.
T Consensus       288 -~~gK~lg-gG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~  365 (460)
T PRK12403        288 -SIAKGLT-SGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLR  365 (460)
T ss_pred             -EEccccc-ccccceEEEEECHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence             3789987 674 89999999998887743      123467889988888888753   33333 32 23333444444


Q ss_pred             HHHccCCCCcccCCCceEEEEEeCCC------CC-----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHH
Q 014594          347 KLLKDVPFLNPYPSYSNFILCEVTSG------MD-----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTD  412 (422)
Q Consensus       347 ~~L~~~~~~~~~p~~~~f~~~~~~~~------~~-----~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~  412 (422)
                      +..++++.+.-....|.++.+++...      .+     ...+...+.++|+.+.+..     +.+|++..   +.++.+
T Consensus       366 ~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~-----~~~~l~Ppl~it~~eid  440 (460)
T PRK12403        366 EVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRSTL-----GRMIMAPALVAGRAEID  440 (460)
T ss_pred             HHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEecC-----CEEEEECCCCCCHHHHH
Confidence            44444554444556777877777421      01     1234455678999998542     45889876   344444


Q ss_pred             HHHHHHh
Q 014594          413 ALMECLM  419 (422)
Q Consensus       413 ~l~~al~  419 (422)
                      ++.++++
T Consensus       441 ~~~~~l~  447 (460)
T PRK12403        441 ELVDKTR  447 (460)
T ss_pred             HHHHHHH
Confidence            4444443

>PLN02452 phosphoserine transaminase

Probab=99.69  E-value=1.4e-14  Score=139.63  Aligned_cols=306  Identities=13%  Similarity=0.068  Sum_probs=205.8

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhc-C-----------CCCCCCCCcc--hHHHHHHHHHHcCCCCC--CEEEeCCHHHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQ-L-----------KFPYIYPDPE--SRRLRAALAKDSGLESD--HILVGCGADELI  159 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~-----------~~~~~y~~~~--~~~lr~~la~~~~~~~~--~i~~~~G~~~al  159 (422)
                      ..+.|..  .|...|++|++++.+ +           ..+|+-++..  ..+.++.|.++++++.+  -+++..|++.++
T Consensus         7 ~~~~f~p--GP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~   84 (365)
T PLN02452          7 RVFNFSA--GPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQF   84 (365)
T ss_pred             ceEeeeC--CCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHH
Confidence            3455544  556668999988865 2           1224444432  56888999999998433  356678999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCc-h-hHHHHHHHcCCEEEEecCCCC---CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594          160 DLIMRCVLDPGDKIVDCPPTF-T-MYEFDAAVNGAAVVKVPRKSD---FSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (422)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y-~-~~~~~~~~~g~~~~~v~~~~~---~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~  234 (422)
                      ++++..++.+||++++...++ . .+...++.+|...+....+++   ..+++++++.   .++.+.+.+++.+..||+.
T Consensus        85 ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~hnETstGv~  161 (365)
T PLN02452         85 AAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWEL---TPDAKFVHICANETIHGVE  161 (365)
T ss_pred             HHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHcCC---CCCCcEEEECCCCCCCcEe
Confidence            999999999999877665544 3 455667778864444422122   1356666522   2568999999999999996


Q ss_pred             -CCHHHHHHHHcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc----
Q 014594          235 -INDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK----  309 (422)
Q Consensus       235 -~~~e~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~----  309 (422)
                       .+.+++   .  ++++|+|.+.......    -.+...+  +...|..|.+|.+|  +|++++++++++++....    
T Consensus       162 ~~~~~~i---~--~~~lvVDa~Ss~g~~p----idv~~~~--v~~~saqK~lGP~G--l~~v~vr~~~l~~~~~~~~~~~  228 (365)
T PLN02452        162 FKDYPDV---G--NVPLVADMSSNFLSKP----VDVSKYG--VIYAGAQKNVGPSG--VTIVIIRKDLIGNARPITPGML  228 (365)
T ss_pred             cCccccc---C--CCeEEEECCccccCcc----cCHHHcC--EEEEecccccCCCC--eEEEEEcHHHHhhcccCCCchh
Confidence             443333   2  4899999998744321    1122233  23358999999888  789999999887653211    


Q ss_pred             ---------C-CCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCC-cc-cC---CCceEEEEEeC
Q 014594          310 ---------Q-PYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFL-NP-YP---SYSNFILCEVT  370 (422)
Q Consensus       310 ---------~-~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~-~~-~p---~~~~f~~~~~~  370 (422)
                               + .++++....+++..+|+.   ...++ +.++.+++.+++++.|++.+++ .. ..   .....+.+.++
T Consensus       229 ~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~  308 (365)
T PLN02452        229 DYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLG  308 (365)
T ss_pred             hHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcC
Confidence                     1 135666666666666653   32456 9999999999999999986433 21 11   12345667777


Q ss_pred             CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          371 SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       371 ~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      +....++|.+.+.++|+...+|.... .+ +|+|+-   ..++++.|.++++.+
T Consensus       309 ~~~~~~~f~~~~~~~g~~~~~G~r~~-gg-~R~s~yna~~~~~v~~L~~~m~~f  360 (365)
T PLN02452        309 GSELEAEFVKEAAKAGMVQLKGHRSV-GG-MRASIYNAMPLAGVEKLVAFMKDF  360 (365)
T ss_pred             CchhHHHHHHHHHHCCCcccCCcccc-Cc-eEEECcCCCCHHHHHHHHHHHHHH
Confidence            54467889999999999998876432 23 999963   466788888888765

>PRK07480 putative aminotransferase; Validated

Probab=99.69  E-value=1.7e-14  Score=143.74  Aligned_cols=319  Identities=18%  Similarity=0.162  Sum_probs=193.8

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCC------CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFP------YIYPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~------~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~  160 (422)
                      ..+++.+||+..+.  ..+ ..+|++.+++.+ +...      ..++.+...+|.++|++.++...+.+++++++++|++
T Consensus        46 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e  125 (456)
T PRK07480         46 DSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEAND  125 (456)
T ss_pred             eCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence            45678899998763  223 357888888875 2211      1234445567888888887544569999999999999


Q ss_pred             HHHHHhcC-------CC-CEEEEcCCCchhHHHHHHH-cCCE------------EEEecCCCCC----CCC--------H
Q 014594          161 LIMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGAA------------VVKVPRKSDF----SLN--------V  207 (422)
Q Consensus       161 ~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~~------------~~~v~~~~~~----~~d--------~  207 (422)
                      .+++....       +| .+|+....+|++....+.. .|..            +..++.+..+    ..+        +
T Consensus       126 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  205 (456)
T PRK07480        126 TVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAA  205 (456)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHH
Confidence            99985321       33 4688888888754332211 1111            1112211100    011        2


Q ss_pred             HHHHHHhhc---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEE
Q 014594          208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV  277 (422)
Q Consensus       208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~  277 (422)
                      +.+++.+.+   .++.+|++...+.-.|.+.+    .+.+++||+. |+++|+||++..|...+..  ....+..+++  
T Consensus       206 ~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDi--  283 (456)
T PRK07480        206 RQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDL--  283 (456)
T ss_pred             HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCe--
Confidence            566655521   46778888877776788776    4566667766 9999999999988543322  1222222333  


Q ss_pred             EccChhhhccccc-cceeeecCHHHHHHHHH------hcCCCCCcHHHHHHHHHHccCChHHHHHHHH-HHHHHHHHHHH
Q 014594          278 LRTFSKRAGLAGL-RVGYGAFPLSIIEYLWR------AKQPYNVSVAAEVAACAALQNPIYLEVKEAL-IKERERLFKLL  349 (422)
Q Consensus       278 ~~S~SK~~~~~G~-r~G~i~~~~~~~~~l~~------~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~-~~~~~~l~~~L  349 (422)
                       -+|+|.++ .|+ .+|.+++++++.+.+..      ...+|+.|+++.+++.+.|+.-+-.+..++. ++.-+++.+.|
T Consensus       284 -v~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l  361 (456)
T PRK07480        284 -MTIAKGLT-SGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERVRDDTGPYLQKRL  361 (456)
T ss_pred             -eeeehhhc-cCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence             35689987 674 89999999999887731      2235788999999998888531100133344 24444444444


Q ss_pred             c---cCCCCcccCCCceEEEEEeCCC------C-C----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHH
Q 014594          350 K---DVPFLNPYPSYSNFILCEVTSG------M-D----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTD  412 (422)
Q Consensus       350 ~---~~~~~~~~p~~~~f~~~~~~~~------~-~----~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~  412 (422)
                      +   +++.+.-....|.++.+++.+.      . +    ...+.+.++++||.+.+..     +.+||+...   .+++|
T Consensus       362 ~~l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~-----~~l~~~Ppl~it~~eid  436 (456)
T PRK07480        362 RELADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAVG-----DRMIISPPLVITHAEID  436 (456)
T ss_pred             HHhhcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeecC-----CEEEEECCCCCCHHHHH
Confidence            3   4443333446677777777311      0 1    2456677889999997642     679999764   44444


Q ss_pred             HHHHHH
Q 014594          413 ALMECL  418 (422)
Q Consensus       413 ~l~~al  418 (422)
                      ++.+++
T Consensus       437 ~~~~~l  442 (456)
T PRK07480        437 ELVEKA  442 (456)
T ss_pred             HHHHHH
Confidence            444443

>PRK07483 hypothetical protein; Provisional

Probab=99.69  E-value=5.7e-14  Score=139.56  Aligned_cols=321  Identities=13%  Similarity=0.160  Sum_probs=194.2

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~-----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      +.+++.+||+..+.  ..+ ..+|.+.+++.+ +...     ..|..+...+|.+.|++......+.+++++++++|++.
T Consensus        26 D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~  105 (443)
T PRK07483         26 DATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEA  105 (443)
T ss_pred             eCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHH
Confidence            45678899998773  333 357888888876 3211     11333445567777777764334699999999999999


Q ss_pred             HHHHhcC-------CC-CEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCCCCC-----C--------H
Q 014594          162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSL-----N--------V  207 (422)
Q Consensus       162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~~-----d--------~  207 (422)
                      +++....       +| .+|+....+|++....+.. .|-            .+..++....+..     +        +
T Consensus       106 AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (443)
T PRK07483        106 ALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLA  185 (443)
T ss_pred             HHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHH
Confidence            9984321       33 5688888888755433222 111            1122221111110     0        2


Q ss_pred             HHHHHHhhc---CCCeEEEEeCCCC-ccCcCCC-H---HHHHHHHcC-CCeEEEccCCccccCCCchhh--hhhcCCcEE
Q 014594          208 ELIADAVER---EKPKCIFLTSPNN-PDGSIIN-D---EDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLI  276 (422)
Q Consensus       208 ~~l~~~i~~---~~~~~i~l~~p~N-PtG~~~~-~---e~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i  276 (422)
                      +.+++.+.+   +++.+|++...+. -.|.+.+ .   +.++++|+. |+++|.||++..|...+....  ..+..++++
T Consensus       186 ~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv  265 (443)
T PRK07483        186 DELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLV  265 (443)
T ss_pred             HHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCee
Confidence            566665532   4577888886553 3465554 4   444555665 999999999998864443221  222233334


Q ss_pred             EEccChhhhccccc-cceeeecCHHHHHHHHHh------cCCCCCcHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHH
Q 014594          277 VLRTFSKRAGLAGL-RVGYGAFPLSIIEYLWRA------KQPYNVSVAAEVAACAALQN---PIYLEVKEALIKERERLF  346 (422)
Q Consensus       277 ~~~S~SK~~~~~G~-r~G~i~~~~~~~~~l~~~------~~~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~  346 (422)
                         +++|.++ .|+ .+|.+++++++.+.+...      ..+|+.|+++.+++.+.|+-   ++   ..++.++.-++|.
T Consensus       266 ---~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~---l~~~~~~~g~~l~  338 (443)
T PRK07483        266 ---TIAKGLG-AGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDG---LLANVRARGEQLR  338 (443)
T ss_pred             ---eehhhhc-cCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHH
Confidence               4589987 785 899999999998877532      23577889988888888752   33   3344444444444


Q ss_pred             HHH----ccCCCCcccCCCceEEEEEeCCC------C-----CHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEec--
Q 014594          347 KLL----KDVPFLNPYPSYSNFILCEVTSG------M-----DAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVG--  406 (422)
Q Consensus       347 ~~L----~~~~~~~~~p~~~~f~~~~~~~~------~-----~~~~~~~~L~~~gI~v~~~~~---~~~~~~iRis~~--  406 (422)
                      +.|    ++++.+.-....|.++-+++...      .     ....+.+.+.++||++.+...   ...++.+||...  
T Consensus       339 ~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~  418 (443)
T PRK07483        339 ARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFI  418 (443)
T ss_pred             HHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECCCC
Confidence            444    44554333456777777766321      0     135677888899999987532   122478999875  


Q ss_pred             -ChhhHHHHHHHH
Q 014594          407 -KPEHTDALMECL  418 (422)
Q Consensus       407 -~~~~~~~l~~al  418 (422)
                       +.+++|++.+++
T Consensus       419 it~~eid~~~~~l  431 (443)
T PRK07483        419 ITAAQIDEIVERL  431 (443)
T ss_pred             CCHHHHHHHHHHH
Confidence             344444444443

>PRK06148 hypothetical protein; Provisional

Probab=99.68  E-value=2.8e-14  Score=154.49  Aligned_cols=323  Identities=13%  Similarity=0.082  Sum_probs=201.7

Q ss_pred             CCCCCCeEEcCCCCCCCC-CCHHHHHHHhc-CC---CCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594           91 GRKPEDIVKIDANENPYG-PPPEVREALGQ-LK---FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~~~~-~~~~v~~al~~-~~---~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~  165 (422)
                      ..+++.++|+.++...++ .+|+|.+++.+ +.   ....|..+...+|-++|++.+.-..+.++++++|++|++.+++.
T Consensus       620 D~dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~Alkl  699 (1013)
T PRK06148        620 DNRGRAYLDCFNNVCHVGHAHPRVVAAAARQAARLNTNTRYLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRL  699 (1013)
T ss_pred             ECCCCEEEEcccChhhcCCCCHHHHHHHHHHHhhcCCcCCcCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHH
Confidence            345788999988765554 57889888876 32   22345555567788888887754346899999999999999994


Q ss_pred             hc--CCCCEEEEcCCCchhHHHHHHH-cC------------CEEEEecCCC----CCCC-C-------HHHHHHHhh---
Q 014594          166 VL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKS----DFSL-N-------VELIADAVE---  215 (422)
Q Consensus       166 l~--~~gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~----~~~~-d-------~~~l~~~i~---  215 (422)
                      -.  ....+|+....+|++....+.. .+            ..+..++..+    .++. |       .+.+++.+.   
T Consensus       700 Ar~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~  779 (1013)
T PRK06148        700 ARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMA  779 (1013)
T ss_pred             HHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhh
Confidence            32  2236788888888755432211 11            0111111110    1111 1       134554442   


Q ss_pred             --cCCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCc-hh--hhhhcCCcEEEEccChhhh
Q 014594          216 --REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES-RM--EWVKKHDNLIVLRTFSKRA  285 (422)
Q Consensus       216 --~~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~-~~--~~~~~~~~~i~~~S~SK~~  285 (422)
                        ..++.+|++.....-.|.+.+    .+++.++|+. |+++|.||++..|...+. ..  ...+-.+.+   -+++|.+
T Consensus       780 ~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDi---vt~gK~l  856 (1013)
T PRK06148        780 AKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDI---VTMGKPI  856 (1013)
T ss_pred             ccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcce---eeecccc
Confidence              145788888866666777776    4555666666 999999999998864442 11  112222333   3568999


Q ss_pred             ccccccceeeecCHHHHHHHHH---hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCccc
Q 014594          286 GLAGLRVGYGAFPLSIIEYLWR---AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPY  358 (422)
Q Consensus       286 ~~~G~r~G~i~~~~~~~~~l~~---~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~  358 (422)
                      | .|+.+|.+++++++.+.+..   ...+|+.|+++.+++.+.|+.-+-.+..++.++.-++|.+.|++    ++.+.-.
T Consensus       857 g-gG~Plgav~~~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~V  935 (1013)
T PRK06148        857 G-NGHPMGAVVTTREIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGDV  935 (1013)
T ss_pred             c-CCcceEEEEEcHHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCceEE
Confidence            8 78999999999999887743   22457789999888888875311001444455555555555544    4544334


Q ss_pred             CCCceEEEEEeCCCC--------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          359 PSYSNFILCEVTSGM--------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       359 p~~~~f~~~~~~~~~--------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      ...|.++-+++....        ....+.+.|+++||++.+...  ..+.+||...   +.++.|++.++++
T Consensus       936 rG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~--~~~vlr~~Ppl~it~~~id~~l~~l~ 1005 (1013)
T PRK06148        936 RGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTEGP--HDNVLKIRPPLIFSRADADHLLEVLD 1005 (1013)
T ss_pred             eeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEeccCC--CCCEEEEeCCccCCHHHHHHHHHHHH
Confidence            567788888774211        134677888899999986432  2578999876   3444444444443

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=99.68  E-value=1.1e-13  Score=137.74  Aligned_cols=324  Identities=16%  Similarity=0.172  Sum_probs=196.0

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCC----CCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFP----YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~----~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      +.+++.+||+..+.  ..+ ..+|++.+++.+ +...    ..| +.+...+|.+.|++..+...+.+++++++++|++.
T Consensus        49 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~  128 (457)
T PRK05639         49 DVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDM  128 (457)
T ss_pred             eCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHH
Confidence            45678899998774  233 457888888876 3211    122 23344678888888776444689999999999999


Q ss_pred             HHHHhc--CCCCEEEEcCCCchhHHHHHHH-cCC-------------EEEEecCCCCCC--------CCH--------HH
Q 014594          162 IMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSDFS--------LNV--------EL  209 (422)
Q Consensus       162 ~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~~--------~d~--------~~  209 (422)
                      +++.-.  ....+|+....+|++....+.. .|.             .++.+|.++.+.        -|.        +.
T Consensus       129 AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (457)
T PRK05639        129 AIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDY  208 (457)
T ss_pred             HHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHH
Confidence            999532  2336788888888765433322 111             133344221111        122        23


Q ss_pred             HHHHhh-----cCCCeEEEEeCCCCccCcCCC-HHHHH---HHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEE
Q 014594          210 IADAVE-----REKPKCIFLTSPNNPDGSIIN-DEDLL---KILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV  277 (422)
Q Consensus       210 l~~~i~-----~~~~~~i~l~~p~NPtG~~~~-~e~l~---~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~  277 (422)
                      +++.+.     ..++.+|++...+...|.+.+ .+-++   ++|+. |+++|+||++..|...+..  ....+-.+++++
T Consensus       209 le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~  288 (457)
T PRK05639        209 LENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLII  288 (457)
T ss_pred             HHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCCEEE
Confidence            444431     256889998877776787664 44444   44554 9999999999987543332  122222333333


Q ss_pred             EccChhhhccccccceeeecCHHHHHHHHH-hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----C
Q 014594          278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWR-AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----V  352 (422)
Q Consensus       278 ~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~-~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~  352 (422)
                         |+|.++ .|+.+|.+++++++.+.... ....++.++++.+++.+.|+.-+-.+..++.+++-++|.+.|++    .
T Consensus       289 ---~gK~l~-gG~pi~av~~~~~i~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~  364 (457)
T PRK05639        289 ---FGKGVA-SGMGLSGVIGRKELMDLTSGSALLTPAANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESF  364 (457)
T ss_pred             ---echhhc-CCCcceeEEehHHHHhhcCCCcccCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhC
Confidence               799997 68999999999999883211 12246678888888887775321111344444455555555544    4


Q ss_pred             CCCcccCCCceEEEEEeCCC------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594          353 PFLNPYPSYSNFILCEVTSG------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       353 ~~~~~~p~~~~f~~~~~~~~------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  420 (422)
                      +.+.-....|.++.+++...      .....+.+.+.++|+++.+..  ..++.+|+.....-+.++++++++.
T Consensus       365 ~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~g--~~~~~lr~~Ppl~it~~~id~~~~~  436 (457)
T PRK05639        365 EVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFELGLILPSYG--MFGNVIRITPPLVITKEIAEKGLEI  436 (457)
T ss_pred             CCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeecC--CCCCEEEEeCCCccCHHHHHHHHHH
Confidence            43333456777777776321      114567788889999997653  1247899997633223444444443

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.67  E-value=5.3e-14  Score=140.07  Aligned_cols=320  Identities=13%  Similarity=0.101  Sum_probs=197.7

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CC---CC--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LK---FP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~---~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      +.+++.+||+..+.  ..+ ..+|++.+++.+ +.   +.  ..++.+...+|.+.|++..+..-+.+++++++++|++.
T Consensus        50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~  129 (453)
T PRK06943         50 DRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAGCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEI  129 (453)
T ss_pred             eCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHH
Confidence            34678899998773  333 357888888875 22   11  12344445678888888776434689999999999999


Q ss_pred             HHHHhc-------CCC-CEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCCCC------------CCHH
Q 014594          162 IMRCVL-------DPG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFS------------LNVE  208 (422)
Q Consensus       162 ~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~------------~d~~  208 (422)
                      +++.-.       .+| .+|+....+|++....+.. .|-            .+..++.+....            -+++
T Consensus       130 AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  209 (453)
T PRK06943        130 ALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALA  209 (453)
T ss_pred             HHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHH
Confidence            999541       123 6799999999765432221 110            122233211111            1246


Q ss_pred             HHHHHhhc--CCCeEEEEeC-CCCccCcCC-CHHHHH---HHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEE
Q 014594          209 LIADAVER--EKPKCIFLTS-PNNPDGSII-NDEDLL---KILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVL  278 (422)
Q Consensus       209 ~l~~~i~~--~~~~~i~l~~-p~NPtG~~~-~~e~l~---~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~  278 (422)
                      .+++.+.+  +++.+|++.. .+.-.|... +.+-++   ++|+. |+++|.||++..|...+...  ...+..+++++ 
T Consensus       210 ~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt-  288 (453)
T PRK06943        210 DVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLC-  288 (453)
T ss_pred             HHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEe-
Confidence            77777742  4678888886 366677765 444444   44554 99999999999886443321  22233344443 


Q ss_pred             ccChhhhcccc-ccceeeecCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHH
Q 014594          279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLL  349 (422)
Q Consensus       279 ~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~--------~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L  349 (422)
                        ++|.++ .| +.+|.+++++++.+.+..        ...+|+.|+++.+++.+.|+--+-.+..++.+++-+++.+.|
T Consensus       289 --~gKgl~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L  365 (453)
T PRK06943        289 --LSKGIS-GGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDDVLARNARKSARLRAAL  365 (453)
T ss_pred             --eehhhc-cCcccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence              589998 78 599999999999887752        223567889988888888753110013444455555555555


Q ss_pred             cc---CCCCcccCCCceEEEEEeCCCCC-----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHH
Q 014594          350 KD---VPFLNPYPSYSNFILCEVTSGMD-----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECL  418 (422)
Q Consensus       350 ~~---~~~~~~~p~~~~f~~~~~~~~~~-----~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al  418 (422)
                      ++   .+.+.-....|.++-+++....+     ...+.+.+.++||++.+..     +.+||+..   ++++++++.+++
T Consensus       366 ~~l~~~~~v~~vrG~Gl~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~g-----~~l~~~Ppl~it~~eid~~~~~l  440 (453)
T PRK06943        366 APLAAHPQVRHLRQRGTIFAFDVALDGDAARTFSRRFFEAALERELLLRPIG-----TTVYLMPPYVLDDDEIAWLAERT  440 (453)
T ss_pred             HHHhcCCCEEeEeccccEEEEEEccCCCcchHHHHHHHHHHHHCCcEEEecC-----CEEEEeCCCcCCHHHHHHHHHHH
Confidence            44   33333345667777777742111     3567788889999998753     46999854   344444444444


Q ss_pred             h
Q 014594          419 M  419 (422)
Q Consensus       419 ~  419 (422)
                      +
T Consensus       441 ~  441 (453)
T PRK06943        441 R  441 (453)
T ss_pred             H
Confidence            3

>PRK07036 hypothetical protein; Provisional

Probab=99.67  E-value=6.5e-14  Score=139.94  Aligned_cols=319  Identities=15%  Similarity=0.173  Sum_probs=198.1

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CC---CCCC---CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LK---FPYI---YPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~---~~~~---y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~  160 (422)
                      ..+++.++|+..+.  ..+ ..+|++.+++.+ +.   +...   ++.+...+|.+.|.+......+.+++++++++|++
T Consensus        47 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve  126 (466)
T PRK07036         47 DADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVD  126 (466)
T ss_pred             ECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHH
Confidence            34678899998774  223 357888888875 22   1111   23333556777777776544468999999999999


Q ss_pred             HHHHHhc------C-CC-CEEEEcCCCchhHHHHHHHc-CC------------EEEEecCCCC----CCCC--------H
Q 014594          161 LIMRCVL------D-PG-DKIVDCPPTFTMYEFDAAVN-GA------------AVVKVPRKSD----FSLN--------V  207 (422)
Q Consensus       161 ~~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~----~~~d--------~  207 (422)
                      .+++...      . +| .+|+....+|++....+... |-            .+..++.+..    ++.+        +
T Consensus       127 ~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  206 (466)
T PRK07036        127 SALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLV  206 (466)
T ss_pred             HHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHH
Confidence            9999431      1 22 67888888887654333221 11            1233332111    1111        2


Q ss_pred             HHHHHHhhc---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhh---hhhcCCcEE
Q 014594          208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME---WVKKHDNLI  276 (422)
Q Consensus       208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~---~~~~~~~~i  276 (422)
                      +.+++.+..   +++.+|++.......|...+    .++++++|+. |+++|.||++..|...+....   ..+..++++
T Consensus       207 ~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDiv  286 (466)
T PRK07036        207 DEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDII  286 (466)
T ss_pred             HHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEE
Confidence            345555532   46788888877777888887    5677777876 999999999998864332211   122233333


Q ss_pred             EEccChhhhcccc-ccceeeecCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHH
Q 014594          277 VLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLF  346 (422)
Q Consensus       277 ~~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~  346 (422)
                         +++|.++ .| +.+|.+++++++.+.+...         ..+|+.++++.+++.+.|+.-+-.+..++.++..++|.
T Consensus       287 ---t~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~  362 (466)
T PRK07036        287 ---TFAKGLT-SGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREGLCEHVREVGPYFE  362 (466)
T ss_pred             ---EEccccc-cCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence               4689987 68 5899999999998877531         12567789998888888753110014455555555555


Q ss_pred             HHHcc---CCCCcccCCCceEEEEEeCCCC--------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chh
Q 014594          347 KLLKD---VPFLNPYPSYSNFILCEVTSGM--------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPE  409 (422)
Q Consensus       347 ~~L~~---~~~~~~~p~~~~f~~~~~~~~~--------~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~  409 (422)
                      +.|++   ++.+......|.++.+++....        +   ...+.+.+.++||++.+..     +.+|++..   +.+
T Consensus       363 ~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~-----~~~~l~Ppl~it~~  437 (466)
T PRK07036        363 ERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLE-----HLCVLSPPLIITRA  437 (466)
T ss_pred             HHHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeecC-----CEEEEeCCCcCCHH
Confidence            55544   4433334456777777773210        1   3467778889999998643     57888855   445


Q ss_pred             hHHHHHHHH
Q 014594          410 HTDALMECL  418 (422)
Q Consensus       410 ~~~~l~~al  418 (422)
                      +++++.+++
T Consensus       438 ~id~~~~~l  446 (466)
T PRK07036        438 QIDEIVAIL  446 (466)
T ss_pred             HHHHHHHHH
Confidence            555554444

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.67  E-value=7e-14  Score=138.46  Aligned_cols=317  Identities=14%  Similarity=0.141  Sum_probs=198.2

Q ss_pred             CCCCCeEEcCCCC---CCCCCCHHHHHHHhc-CCC-C---C-CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           92 RKPEDIVKIDANE---NPYGPPPEVREALGQ-LKF-P---Y-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        92 ~~~~~~i~l~~~~---~~~~~~~~v~~al~~-~~~-~---~-~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      .++++++|+..+.   +--..+|++.+++.+ +.. .   . .+..+...++.+.+++..+..-+.++++++++++++.+
T Consensus        42 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~A  121 (427)
T TIGR00508        42 DDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVA  121 (427)
T ss_pred             CCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHH
Confidence            4577899998764   222457888888775 221 1   1 12333456788888887754447999999999999999


Q ss_pred             HHHhcC-------CC-CEEEEcCCCchhHHHHHHH-cCCE-------------EEEecCC-CCCC-----CCHHHHHHHh
Q 014594          163 MRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGAA-------------VVKVPRK-SDFS-----LNVELIADAV  214 (422)
Q Consensus       163 ~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~~-------------~~~v~~~-~~~~-----~d~~~l~~~i  214 (422)
                      ++.-..       +| .+|+....+|++....+.. .|..             ...++.. ..+.     -|++++++.+
T Consensus       122 lklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l  201 (427)
T TIGR00508       122 LKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLM  201 (427)
T ss_pred             HHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHH
Confidence            885321       23 6799999999765433322 1211             1112111 0111     1467777777


Q ss_pred             hc--CCCeEEEEeCC-CCccCcCC-CHHHHHHH---HcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhh
Q 014594          215 ER--EKPKCIFLTSP-NNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKR  284 (422)
Q Consensus       215 ~~--~~~~~i~l~~p-~NPtG~~~-~~e~l~~i---~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~  284 (422)
                      .+  .+..+|++... ++-.|... +.+.+.+|   |+. |+++|+||++.+|...+..  ....+..+. ++  +++|.
T Consensus       202 ~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pD-i~--~~gK~  278 (427)
T TIGR00508       202 ELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPD-IL--CVGKA  278 (427)
T ss_pred             HhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCC-EE--Eechh
Confidence            53  35667777753 55555533 55555555   444 9999999999877543322  112222233 33  37999


Q ss_pred             hccccc-cceeeecCHHHHHHHHHh-------cCCCCCcHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHccCC
Q 014594          285 AGLAGL-RVGYGAFPLSIIEYLWRA-------KQPYNVSVAAEVAACAALQN---PIYLEVKEALIKERERLFKLLKDVP  353 (422)
Q Consensus       285 ~~~~G~-r~G~i~~~~~~~~~l~~~-------~~~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~~~L~~~~  353 (422)
                      ++ .|+ .++.+++++++.+.+...       ..+|..++++.+++.++|+.   ++   ..++.+++.++|.+.|+++.
T Consensus       279 l~-gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~---~~~~~~~~~~~l~~~L~~l~  354 (427)
T TIGR00508       279 LT-GGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEGE---WQKQVSAIENQLKRELSPLR  354 (427)
T ss_pred             hh-cCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHhh
Confidence            96 774 688888999998887642       23466788888888888762   23   44566666777777776653


Q ss_pred             CC---cccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          354 FL---NPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       354 ~~---~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      ..   ......|.++.+.+....+...+.+.|.++||.+.+..     +.+|++..   +.++++++.+++++
T Consensus       355 ~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gv~~~~~~-----~~l~~~ppl~~t~~~id~~~~~l~~  422 (427)
T TIGR00508       355 KNPVVKDVRVLGAIGVVEMYKPVNVEELQKKFVEQGVWIRPFG-----KLIYVMPPYIITTEQLQKLTAALIE  422 (427)
T ss_pred             cCCCEEeEeccccEEEEEECCccCHHHHHHHHHHCCeEEEecC-----CEEEEECCCCCCHHHHHHHHHHHHH
Confidence            21   11223467777777544467789999999999997653     47999875   45555655555543

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.66  E-value=7.2e-14  Score=138.08  Aligned_cols=321  Identities=12%  Similarity=0.102  Sum_probs=196.1

Q ss_pred             CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594           91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~  164 (422)
                      +.+++.+||+..+..  .+ ..+|++.+++.+ +...  ..++.+...+|-+.|.+.++...+.+.+++++++|++.+++
T Consensus        49 D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~Aik  128 (433)
T PRK00615         49 DSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTSYGLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVR  128 (433)
T ss_pred             ECCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHH
Confidence            356788999987743  33 357888888876 3222  22344456678888888776444689999999999999999


Q ss_pred             HhcC-CC-CEEEEcCCCchhHHHH---HHH-cCCEE----EEe--c-CCCC----CCCCHHHHHHHhhc--CCCeEEEEe
Q 014594          165 CVLD-PG-DKIVDCPPTFTMYEFD---AAV-NGAAV----VKV--P-RKSD----FSLNVELIADAVER--EKPKCIFLT  225 (422)
Q Consensus       165 ~l~~-~g-d~Vl~~~p~y~~~~~~---~~~-~g~~~----~~v--~-~~~~----~~~d~~~l~~~i~~--~~~~~i~l~  225 (422)
                      .-.. .| .+|+....+|++....   +.. .+...    ...  + ....    ..-|++.+++.+.+  .++.+|++.
T Consensus       129 lAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~E  208 (433)
T PRK00615        129 LARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFE  208 (433)
T ss_pred             HHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEEC
Confidence            4321 23 6788888888765311   111 11000    000  0 0000    01268888888853  356788877


Q ss_pred             CCCCccCcCCCHH----HHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceeeecC
Q 014594          226 SPNNPDGSIINDE----DLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (422)
Q Consensus       226 ~p~NPtG~~~~~e----~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~  298 (422)
                      ......|...+.+    ++.++|+. |+++|+||++..|. .+..  ....+..+.++   +++|.+| .|+.+|+++++
T Consensus       209 pv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R-~G~~ga~~~~gv~PDi~---~~gK~lg-gG~p~~av~~~  283 (433)
T PRK00615        209 PICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFR-VAQGGAAAIYHVKPDIT---VYGKILG-GGLPAAAVVAH  283 (433)
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccccc-ccHhHHHHhcCCCCCeE---EEccccc-CCcceeeeeec
Confidence            7777789888765    88888886 99999999998772 2221  11122223332   4799987 67889999999


Q ss_pred             HHHHHHHHHhc-----CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHH----HHHHccCCC-CcccCCCceEEEEE
Q 014594          299 LSIIEYLWRAK-----QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERL----FKLLKDVPF-LNPYPSYSNFILCE  368 (422)
Q Consensus       299 ~~~~~~l~~~~-----~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l----~~~L~~~~~-~~~~p~~~~f~~~~  368 (422)
                      +++++.+....     ..++.+++..+++.+.|+.-+..+.+++++++-+++    .+.+.+.++ +.... .|.++.++
T Consensus       284 ~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~G~~~~i~  362 (433)
T PRK00615        284 KSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-YGSMFSFF  362 (433)
T ss_pred             HHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-eceEEEEE
Confidence            99998875322     235668888888888875311001344444444555    444444332 22233 56666666


Q ss_pred             eCCCC----------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594          369 VTSGM----------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       369 ~~~~~----------~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  420 (422)
                      +....          +   ...+...|.++||.+.+...+.  .+++... ++++++++.++++.
T Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~--~~ls~~h-t~~did~~~~a~~~  424 (433)
T PRK00615        363 FNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPFEA--SFLSSAH-SMENLDYAQNVLID  424 (433)
T ss_pred             EeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCccccc--cceecCC-CHHHHHHHHHHHHH
Confidence            64211          1   2367888889999998765311  1232222 45556677666654

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.66  E-value=6.4e-14  Score=139.85  Aligned_cols=319  Identities=13%  Similarity=0.139  Sum_probs=196.9

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCC---C--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKF---P--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~---~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      ..+++.++|+..+.  ..+ ..+|++.+++.+ +..   .  ..|..+...+|.+.|++......+.+++++++++|++.
T Consensus        43 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~  122 (466)
T PRK07030         43 DFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEV  122 (466)
T ss_pred             ECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHH
Confidence            34678899998773  223 357888888775 321   1  12344445678888887765344699999999999999


Q ss_pred             HHHHhc------C-CC-CEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCCC----CC--------CHH
Q 014594          162 IMRCVL------D-PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDF----SL--------NVE  208 (422)
Q Consensus       162 ~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~----~~--------d~~  208 (422)
                      +++...      . +| .+|+....+|++....+.. .|.            .+..+|....+    +.        +++
T Consensus       123 AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~  202 (466)
T PRK07030        123 ALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFA  202 (466)
T ss_pred             HHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHH
Confidence            999541      1 23 5788899999765443322 121            12223321111    11        245


Q ss_pred             HHHHHhhc--CCCeEEEEeC-CCCccCcCCC-HH---HHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEE
Q 014594          209 LIADAVER--EKPKCIFLTS-PNNPDGSIIN-DE---DLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVL  278 (422)
Q Consensus       209 ~l~~~i~~--~~~~~i~l~~-p~NPtG~~~~-~e---~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~  278 (422)
                      .+++.+.+  +++.+|++.. .+.-.|...+ .+   +++++|+. |+++|.||++..|...+..  ....+-.++++  
T Consensus       203 ~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv--  280 (466)
T PRK07030        203 HMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFL--  280 (466)
T ss_pred             HHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEE--
Confidence            66777742  4677888776 4666677554 33   44555655 9999999999988643332  12222334444  


Q ss_pred             ccChhhhcccc-ccceeeecCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHH
Q 014594          279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKL  348 (422)
Q Consensus       279 ~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~  348 (422)
                       +++|.++ .| +.+|.+++++++.+.+..         ...+|+.++++.+++.+.|+--+-.+..++.++.-+++.+.
T Consensus       281 -~~gKgl~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~  358 (466)
T PRK07030        281 -CLSKALT-GGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIENNRALARRMAEA  358 (466)
T ss_pred             -eeehhcc-CCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence             3589988 78 499999999999887742         22347788999888888875311111445555666666665


Q ss_pred             Hcc---CCCCcccCCCceEEEEEeCCCC--------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhH
Q 014594          349 LKD---VPFLNPYPSYSNFILCEVTSGM--------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHT  411 (422)
Q Consensus       349 L~~---~~~~~~~p~~~~f~~~~~~~~~--------~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~  411 (422)
                      |++   .+.+.-....|.++.+++....        +   ...+.+.+.++|+++.+..     +.+|+...   +.+++
T Consensus       359 L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-----~~i~~~Ppl~it~~ei  433 (466)
T PRK07030        359 TAHLADHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPLG-----SVVYFLPPYVITPEQI  433 (466)
T ss_pred             HHHHhcCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEecC-----CEEEEECCccCCHHHH
Confidence            554   3433324566777777774211        1   2467788889999998753     57999855   34444


Q ss_pred             HHHHHHH
Q 014594          412 DALMECL  418 (422)
Q Consensus       412 ~~l~~al  418 (422)
                      +++.+.+
T Consensus       434 d~~~~~l  440 (466)
T PRK07030        434 DFLAEVA  440 (466)
T ss_pred             HHHHHHH
Confidence            4443333

>PRK07481 hypothetical protein; Provisional

Probab=99.66  E-value=1e-13  Score=138.03  Aligned_cols=319  Identities=15%  Similarity=0.160  Sum_probs=195.9

Q ss_pred             CCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCC---C---CCCCcchHHHHHHHHHHcC-CCCCCEEEeCCHHHHHH
Q 014594           92 RKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFP---Y---IYPDPESRRLRAALAKDSG-LESDHILVGCGADELID  160 (422)
Q Consensus        92 ~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~---~---~y~~~~~~~lr~~la~~~~-~~~~~i~~~~G~~~al~  160 (422)
                      .+++.+||+..+.  ..+ ..+|++.+++.+ +...   .   .++.+...++.+.|++.++ -..+.+++++++++|++
T Consensus        39 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve  118 (449)
T PRK07481         39 IDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVE  118 (449)
T ss_pred             CCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHH
Confidence            4577889997762  233 357888888865 3211   1   2344445678888888773 22458999999999999


Q ss_pred             HHHHHhcC-------CC-CEEEEcCCCchhHHHHHHHcCC-------------EEEEecCCCC----CC-CCHHHH----
Q 014594          161 LIMRCVLD-------PG-DKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSD----FS-LNVELI----  210 (422)
Q Consensus       161 ~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~----~~-~d~~~l----  210 (422)
                      .+++.-..       +| .+|+....+|++....+...+.             .+..++.+..    ++ .|++.+    
T Consensus       119 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~  198 (449)
T PRK07481        119 TALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARIC  198 (449)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHH
Confidence            99995321       23 5789899889765443222111             1222221111    11 244443    


Q ss_pred             ----HHHhh---cCCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEE
Q 014594          211 ----ADAVE---REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLI  276 (422)
Q Consensus       211 ----~~~i~---~~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i  276 (422)
                          ++.+.   .+++.+|++...+.-.|.+.+    .++++++|+. |+++|.||++..|...+...  ...+..++++
T Consensus       199 ~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv  278 (449)
T PRK07481        199 ARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIM  278 (449)
T ss_pred             HHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEE
Confidence                33332   246788988877776788665    4555666665 99999999999886433221  1222233333


Q ss_pred             EEccChhhhcccc-ccceeeecCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHH
Q 014594          277 VLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLF  346 (422)
Q Consensus       277 ~~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~  346 (422)
                         +++|.++ .| +.+|.+++++++.+.+..         ...+|+.++++.+++.+.|+.-+-.+..++.++.-+++.
T Consensus       279 ---~~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~  354 (449)
T PRK07481        279 ---CLAKGIT-SGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVREDLPANAAKRGAYLL  354 (449)
T ss_pred             ---EEeeccc-CCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence               3589987 67 589999999999887753         123467889988888888753111114444555555555


Q ss_pred             HHHcc----CCCCcccCCCceEEEEEeCCC------CC-----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Ch
Q 014594          347 KLLKD----VPFLNPYPSYSNFILCEVTSG------MD-----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KP  408 (422)
Q Consensus       347 ~~L~~----~~~~~~~p~~~~f~~~~~~~~------~~-----~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~  408 (422)
                      +.|++    ++.+.-....|.++.+++...      .+     ...+.+.+.++||++.+..     +.+||+..   +.
T Consensus       355 ~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g-----~~i~l~Ppl~it~  429 (449)
T PRK07481        355 EGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPSG-----TKIILSPPLVIQR  429 (449)
T ss_pred             HHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEecC-----CEEEEECCCCCCH
Confidence            55544    443333456677777776321      01     3456777889999998753     35899855   45


Q ss_pred             hhHHHHHHHHh
Q 014594          409 EHTDALMECLM  419 (422)
Q Consensus       409 ~~~~~l~~al~  419 (422)
                      +++|++.++++
T Consensus       430 ~eid~~~~~l~  440 (449)
T PRK07481        430 EDVDRIVDALD  440 (449)
T ss_pred             HHHHHHHHHHH
Confidence            55555555544

>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.65  E-value=5.4e-15  Score=138.66  Aligned_cols=304  Identities=15%  Similarity=0.137  Sum_probs=205.6

Q ss_pred             CCCCHHHHHHHhcCCCCCC-----CCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCc
Q 014594          107 YGPPPEVREALGQLKFPYI-----YPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF  180 (422)
Q Consensus       107 ~~~~~~v~~al~~~~~~~~-----y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y  180 (422)
                      .++.+.+.+++........     -++. ...++++.+|+++|+ ++.+++..| -......+.+++.||.-|+-.+..|
T Consensus       154 g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~-e~a~vF~mG-f~TNs~~~p~l~~~gsLIiSDelNH  231 (519)
T KOG1357|consen  154 GPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGV-EDAIVFSMG-FATNSMNIPSLLGKGSLIISDELNH  231 (519)
T ss_pred             CcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcCC-cceEEEecc-ccccccCcceeecCCcceeeccccc
Confidence            3456778888876432211     1222 257899999999996 577888887 3355566778899999999999999


Q ss_pred             hhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc------CCC-----eEE-EEeCCCCccCcCCCHHHHHHHHcC-C
Q 014594          181 TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER------EKP-----KCI-FLTSPNNPDGSIINDEDLLKILEM-P  247 (422)
Q Consensus       181 ~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------~~~-----~~i-~l~~p~NPtG~~~~~e~l~~i~~~-~  247 (422)
                      ......++..|+.+.-+..     -|...||+.+++      +++     |.+ ++......-|.+..+.++.++.+. .
T Consensus       232 aSi~~GaRLSgAtiRVfkH-----Ndm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkyk  306 (519)
T KOG1357|consen  232 ASLITGARLSGATTRVFRH-----NDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYK  306 (519)
T ss_pred             hheeccccccCceEEEEec-----CCHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhcccc
Confidence            9999999999999888873     245555555532      222     233 334778899999999999999998 9


Q ss_pred             CeEEEccCCccccCCCc---h--hhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--C--CCcHHH
Q 014594          248 ILVVLDEAYTEFSGLES---R--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--Y--NVSVAA  318 (422)
Q Consensus       248 ~~li~Deay~~~~~~~~---~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~--~~~~~~  318 (422)
                      .+++.||+|+-.+.+..   .  ....+..+.+|.+++|+|+||.+|   ||+.+++++++.++.....  +  .+|++.
T Consensus       307 ayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyiagsk~lid~lrt~s~~~~yat~~sppv  383 (519)
T KOG1357|consen  307 AYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGSKELIDYLRTPSPSALYATSLSPPV  383 (519)
T ss_pred             EEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---ceecCcHHHHhhhccCCCceeecccCChHH
Confidence            99999999986553221   1  122334567799999999999887   9999999999988765433  1  334443


Q ss_pred             HHHHHHHccC-----C-hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEe
Q 014594          319 EVAACAALQN-----P-IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRH  391 (422)
Q Consensus       319 ~~aa~~~L~~-----~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~  391 (422)
                      .......++.     . +..+ ..+++.++..+++..|+..+++......+.-+.+-+-.+..-..+.+.|++++|.+..
T Consensus       384 aqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfivyG~~dSpVvplll~~~~k~~~f~r~~l~~nigvVv  463 (519)
T KOG1357|consen  384 AQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFIVYGNNDSPVVPLLLYGPAKIVAFSREMLERNIGVVV  463 (519)
T ss_pred             HHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEEEecCCCCCcceeeecCcccccHHHHHHHhcCceEEE
Confidence            3334434432     1 2233 7788999999999999999876654445543332221122345677788877666654


Q ss_pred             CC--C-CCCCCeEEEEecChhhHHHHHHHHhh
Q 014594          392 YN--N-KELKGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       392 ~~--~-~~~~~~iRis~~~~~~~~~l~~al~~  420 (422)
                      .+  . +-.+..+|++.+.....|.+..+++.
T Consensus       464 vgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~  495 (519)
T KOG1357|consen  464 VGFPATPLLESRARFCLSASHTKEDLDRALEV  495 (519)
T ss_pred             EeCCCchHHHhHHHhhhcccccHHHHHHHHHH
Confidence            33  3 44577889998754444555555543

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=99.65  E-value=5.3e-13  Score=129.70  Aligned_cols=291  Identities=13%  Similarity=0.122  Sum_probs=187.1

Q ss_pred             CCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch-hHHHHHHHcCCEEEEec---
Q 014594          124 YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT-MYEFDAAVNGAAVVKVP---  198 (422)
Q Consensus       124 ~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~-~~~~~~~~~g~~~~~v~---  198 (422)
                      ..| .++...+|++++++++|.+  +++.+++++.|+.+++...+++||.|  +..+|. .........|+..+.+.   
T Consensus        72 d~Yagd~s~~~LE~~vAe~lG~e--~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d~  147 (460)
T PRK13237         72 EAYAGSRNFYHLEETVQEYYGFK--HVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVDIIIDE  147 (460)
T ss_pred             hhhcCCCcHHHHHHHHHHHHCCC--eEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEeeeccc
Confidence            346 5678899999999999964  79999999999999877778999965  555454 33333567888666553   


Q ss_pred             -------CCCCCCCCHHHHHHHhhcC---CCeEEEEeCCCCcc-CcCCCH---HHHHHHHcC-CCeEEEccCCccc----
Q 014594          199 -------RKSDFSLNVELIADAVERE---KPKCIFLTSPNNPD-GSIIND---EDLLKILEM-PILVVLDEAYTEF----  259 (422)
Q Consensus       199 -------~~~~~~~d~~~l~~~i~~~---~~~~i~l~~p~NPt-G~~~~~---e~l~~i~~~-~~~li~Deay~~~----  259 (422)
                             ...++.+|++++++.+++.   +++++.+.+++|.. |..+|.   +++.++++. |+.||+|.++...    
T Consensus       148 a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~f  227 (460)
T PRK13237        148 AHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYF  227 (460)
T ss_pred             ccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhh
Confidence                   1346789999999999742   34567777788888 688865   555555655 9999999998632    


Q ss_pred             c------CCCchhhh----hhcCCcEEEEccChhhhccccccceeeec-CHHHHHHHHHhcCCC-------CCcHHHHHH
Q 014594          260 S------GLESRMEW----VKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPY-------NVSVAAEVA  321 (422)
Q Consensus       260 ~------~~~~~~~~----~~~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~~~-------~~~~~~~~a  321 (422)
                      .      +.+..+..    ...+. ...+.|++|.++.+ . .|++++ ++++.++++...-.|       +++.-...+
T Consensus       228 I~~re~~y~~~~i~ei~~e~~s~a-D~~t~S~~K~~~~~-~-GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~a  304 (460)
T PRK13237        228 IKEREEGYQDKSIKEIVHEMFSYA-DGCTMSGKKDCLVN-I-GGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEA  304 (460)
T ss_pred             hcccccccCCCcHhHHhhhccCcC-cEEEEeCCCCCCCC-C-ceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHH
Confidence            1      11222111    11122 36667899987644 1 377776 567888887764322       233323333


Q ss_pred             HHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEe----C----CCCCHHHHHHHHH-hCCcEEEeC
Q 014594          322 ACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEV----T----SGMDAKKLKDDLA-KMGVMIRHY  392 (422)
Q Consensus       322 a~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~----~----~~~~~~~~~~~L~-~~gI~v~~~  392 (422)
                      +...|.+..-.+..++.....++|.+.|.+.|.-.+.|.+|.-++++.    |    ....+..+...|. +.||.-...
T Consensus       305 lAvgl~E~~~~~y~~~ri~~~~~l~~~L~~~Gvpv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~  384 (460)
T PRK13237        305 MAIGIEESVQYEYIEHRVGQVRYLGEKLLAAGVPIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIESGVRSMER  384 (460)
T ss_pred             HHhHHHhhchHHHHHHHHHHHHHHHHHHHHCCCceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCeEee
Confidence            333343211112333334567888999988775455678887777753    2    1346778888876 788876421


Q ss_pred             CC------C-CC------CCeEEEEec----ChhhHHHHHHHHhhh
Q 014594          393 NN------K-EL------KGYVRVSVG----KPEHTDALMECLMHL  421 (422)
Q Consensus       393 ~~------~-~~------~~~iRis~~----~~~~~~~l~~al~~l  421 (422)
                      +.      + ..      -..+|+.+.    +..++|.+.+++..+
T Consensus       385 g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~  430 (460)
T PRK13237        385 GIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKL  430 (460)
T ss_pred             cceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHH
Confidence            11      1 11      257999976    456677777777654

>PRK06917 hypothetical protein; Provisional

Probab=99.65  E-value=3.6e-13  Score=134.02  Aligned_cols=325  Identities=15%  Similarity=0.137  Sum_probs=197.5

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCC-CC----CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKF-PY----IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~-~~----~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      ..+++.+||+..+.  ..+ ..+|+|.+++.+ +.. .+    .|+.+...+|.+.|++.+....+.+++++++++|++.
T Consensus        27 D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~  106 (447)
T PRK06917         27 DQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANET  106 (447)
T ss_pred             eCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHH
Confidence            35678899998773  234 357889888876 321 11    2333445678888888775444689999999999999


Q ss_pred             HHHHhc-------CCC-CEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCCC----CC--------CHH
Q 014594          162 IMRCVL-------DPG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDF----SL--------NVE  208 (422)
Q Consensus       162 ~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~----~~--------d~~  208 (422)
                      +++...       .+| .+|+....+|++....+.. .|.            .+..++.....    .-        +++
T Consensus       107 AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  186 (447)
T PRK06917        107 AMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACAT  186 (447)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHH
Confidence            999541       133 6799999999765543322 221            11112211100    01        245


Q ss_pred             HHHHHhhc---CCCeEEEEeCCCC-ccCcCC-CHHHHHH---HHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEE
Q 014594          209 LIADAVER---EKPKCIFLTSPNN-PDGSII-NDEDLLK---ILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIV  277 (422)
Q Consensus       209 ~l~~~i~~---~~~~~i~l~~p~N-PtG~~~-~~e~l~~---i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~  277 (422)
                      .+++.+.+   +++.+|++..... --|.+. +.+-+.+   +|+. |+++|.||++..|...+...  ...+..+++  
T Consensus       187 ~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi--  264 (447)
T PRK06917        187 ELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDI--  264 (447)
T ss_pred             HHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCE--
Confidence            66777653   3578888885543 345555 4544444   4554 99999999999875333221  222223333  


Q ss_pred             EccChhhhccccc-cceeeecCHHHHHHHHHh------cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHc
Q 014594          278 LRTFSKRAGLAGL-RVGYGAFPLSIIEYLWRA------KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLK  350 (422)
Q Consensus       278 ~~S~SK~~~~~G~-r~G~i~~~~~~~~~l~~~------~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~  350 (422)
                       .+++|.++ .|+ .+|.+++++++.+.+...      ..+|+.++++.+++.+.|+.-+-.+..++.+++-++|.+.|+
T Consensus       265 -~~~gK~l~-~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~  342 (447)
T PRK06917        265 -MTLGKGLG-AGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQ  342 (447)
T ss_pred             -EEeeehhc-cCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Confidence             35689987 775 899999999998877532      134678899888888887531100144455555555555554


Q ss_pred             c----CCCCcccCCCceEEEEEeCCC------C-----CHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEec---Chh
Q 014594          351 D----VPFLNPYPSYSNFILCEVTSG------M-----DAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVG---KPE  409 (422)
Q Consensus       351 ~----~~~~~~~p~~~~f~~~~~~~~------~-----~~~~~~~~L~~~gI~v~~~~~---~~~~~~iRis~~---~~~  409 (422)
                      +    .+.+.-....|.++.+++...      .     -...+.+.+.++||++.+...   ....+.+|++..   +++
T Consensus       343 ~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~  422 (447)
T PRK06917        343 KVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTITYS  422 (447)
T ss_pred             HHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECCCcCCHH
Confidence            4    443333456677777766211      1     145677788899999987532   122478999865   344


Q ss_pred             hHHHHHHHHh
Q 014594          410 HTDALMECLM  419 (422)
Q Consensus       410 ~~~~l~~al~  419 (422)
                      +++++.++++
T Consensus       423 eid~~~~~l~  432 (447)
T PRK06917        423 ELDELLSIFA  432 (447)
T ss_pred             HHHHHHHHHH
Confidence            5555555544

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.65  E-value=1.2e-13  Score=137.78  Aligned_cols=317  Identities=12%  Similarity=0.111  Sum_probs=195.0

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-C---CCCC--CCCCcchHHHHHHHHHHcCC-----CCCCEEEeCCHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-L---KFPY--IYPDPESRRLRAALAKDSGL-----ESDHILVGCGAD  156 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~---~~~~--~y~~~~~~~lr~~la~~~~~-----~~~~i~~~~G~~  156 (422)
                      ..+++.+||+..+.  ..+ ..+|++.+++.+ +   .+..  .++.+...+|-+.|++.+..     +.+.++++++++
T Consensus        60 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGS  139 (472)
T PRK08742         60 GHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGS  139 (472)
T ss_pred             eCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCch
Confidence            35678899998773  333 357888888865 2   2221  23444456777777777642     235899999999


Q ss_pred             HHHHHHHHHhcC-------CC-CEEEEcCCCchhHHHHHHHc-CC------------EEEEecCCCCC----CC------
Q 014594          157 ELIDLIMRCVLD-------PG-DKIVDCPPTFTMYEFDAAVN-GA------------AVVKVPRKSDF----SL------  205 (422)
Q Consensus       157 ~al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~----~~------  205 (422)
                      +|++.+++....       +| .+|+....+|++....+... |.            .+..+|..+.+    +.      
T Consensus       140 EAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~  219 (472)
T PRK08742        140 AGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYA  219 (472)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHH
Confidence            999999995421       22 67999999997655433322 11            12223321111    11      


Q ss_pred             --CHHHHHHHhhc--CCCeEEEEeC-CCCccCcCC-CHHHHH---HHHcC-CCeEEEccCCccccCCCch--hhhhhcCC
Q 014594          206 --NVELIADAVER--EKPKCIFLTS-PNNPDGSII-NDEDLL---KILEM-PILVVLDEAYTEFSGLESR--MEWVKKHD  273 (422)
Q Consensus       206 --d~~~l~~~i~~--~~~~~i~l~~-p~NPtG~~~-~~e~l~---~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~  273 (422)
                        +++.+++.+.+  .++.+|++.. ..+-.|.+. +.+-++   ++|+. |+++|.||++..|...+..  ....+..+
T Consensus       220 ~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~P  299 (472)
T PRK08742        220 LQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMP  299 (472)
T ss_pred             HHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCC
Confidence              25667777642  4677888775 466678755 444444   44554 9999999999988643322  22222234


Q ss_pred             cEEEEccChhhhcccc-ccceeeecCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHccC---ChHHHHHHHHHHH
Q 014594          274 NLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALQN---PIYLEVKEALIKE  341 (422)
Q Consensus       274 ~~i~~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~--------~~~~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~  341 (422)
                      ++++   ++|.++ .| +.+|.+++++++.+.+..        ...+|+.++++.+++.+.|+-   ++..+   +.++.
T Consensus       300 Div~---~gKgl~-gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~~---~~~~~  372 (472)
T PRK08742        300 DLLC---LSKGLT-GGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDDVIA---RNQPT  372 (472)
T ss_pred             CEEE---Eccccc-CCCCCcceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCCHHH---HHHHH
Confidence            4443   589987 78 489999999999887642        223477889988888888753   33333   33333


Q ss_pred             HHHH---HHHHccCCCCcccCCCceEEEEEeCCCC------C-----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-
Q 014594          342 RERL---FKLLKDVPFLNPYPSYSNFILCEVTSGM------D-----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-  406 (422)
Q Consensus       342 ~~~l---~~~L~~~~~~~~~p~~~~f~~~~~~~~~------~-----~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-  406 (422)
                      .+++   .+.+++++.+.-....|.++-+++....      +     ...+.+.+.++||++.+.+     +.|||... 
T Consensus       373 g~~l~~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g-----~vi~~~PpL  447 (472)
T PRK08742        373 AARMTQLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPLG-----DVLYWMPPY  447 (472)
T ss_pred             HHHHHHHHHHHhcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEecC-----CEEEEECCC
Confidence            3333   3334445544444677888878774210      1     2456777889999998753     68999976 


Q ss_pred             --ChhhHHHHHHHHh
Q 014594          407 --KPEHTDALMECLM  419 (422)
Q Consensus       407 --~~~~~~~l~~al~  419 (422)
                        ++++++++.+.++
T Consensus       448 ~it~~ei~~~~~~l~  462 (472)
T PRK08742        448 CVDEAQLALLADTTR  462 (472)
T ss_pred             CCCHHHHHHHHHHHH
Confidence              4444444444443

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=99.65  E-value=3.6e-13  Score=118.62  Aligned_cols=301  Identities=20%  Similarity=0.232  Sum_probs=208.2

Q ss_pred             CCHHHHHHHhcCCCCCC---C---------CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Q 014594          109 PPPEVREALGQLKFPYI---Y---------PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDC  176 (422)
Q Consensus       109 ~~~~v~~al~~~~~~~~---y---------~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~  176 (422)
                      .+++.++++.+...++.   |         ..|....+.+.+++++|.  |.+-+|+|+.++=++++.+++++||.|++.
T Consensus        29 Lt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~--D~~R~t~GARe~KfavMhal~~~gd~vV~D  106 (382)
T COG1103          29 LTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGM--DEVRVTAGAREAKFAVMHALCKEGDWVVVD  106 (382)
T ss_pred             CCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCC--ceeeecccchhhHHHHHHHhccCCCEEEEc
Confidence            46788888866422110   1         123456788889999997  468899999999999999999999999999


Q ss_pred             CCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhc------CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-C
Q 014594          177 PPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILEM-P  247 (422)
Q Consensus       177 ~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~------~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~  247 (422)
                      ...|....-+++.+|.++..||..  +++.++++...+.|.+      ..+.+.++++|....|.+.+.+.+.+||+. |
T Consensus       107 ~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~g  186 (382)
T COG1103         107 SLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYG  186 (382)
T ss_pred             CcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcC
Confidence            998876667888999999999932  5678888888777743      237788889999999999999999999998 9


Q ss_pred             CeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc-CC--------CCCcHH-
Q 014594          248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK-QP--------YNVSVA-  317 (422)
Q Consensus       248 ~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~-~~--------~~~~~~-  317 (422)
                      +.++...+|.-...    .......+.+++++|-+|+++ +.-.+|.+....++.+.+.+.. ..        ++.... 
T Consensus       187 vPlllN~AYt~Grm----pvs~ke~g~DFiVgSGHKsmA-As~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rG  261 (382)
T COG1103         187 VPLLLNCAYTVGRM----PVSGKEIGADFIVGSGHKSMA-ASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRG  261 (382)
T ss_pred             CceEeecceeeccc----cccccccCCCEEEecCccchh-ccCCeeEEeehhHHHHHHHhhcccccccceeeeecccccC
Confidence            99999999984322    111223455689999999997 4458999999999988877655 21        122211 


Q ss_pred             -HHHHHHHHccCChHHH---HHHHHHHHHHHHHHHHccCCCCc---ccCCCceEEEEEeCC--------CCCHHHHHHHH
Q 014594          318 -AEVAACAALQNPIYLE---VKEALIKERERLFKLLKDVPFLN---PYPSYSNFILCEVTS--------GMDAKKLKDDL  382 (422)
Q Consensus       318 -~~~aa~~~L~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~---~~p~~~~f~~~~~~~--------~~~~~~~~~~L  382 (422)
                       ......+.+  +.-.+   .++.--++.+++.+.|++++++.   ..|...-.+.++.|.        ....--+++.|
T Consensus       262 apivTlmASf--P~V~eRVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~EL  339 (382)
T COG1103         262 APIVTLMASF--PHVVERVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEEL  339 (382)
T ss_pred             chHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHH
Confidence             111111111  22122   44444566778888888887543   234444455555541        11122356777


Q ss_pred             HhCCcEEEeCCCCCCCCeEEEEe-c-ChhhHHHHHHHHhhh
Q 014594          383 AKMGVMIRHYNNKELKGYVRVSV-G-KPEHTDALMECLMHL  421 (422)
Q Consensus       383 ~~~gI~v~~~~~~~~~~~iRis~-~-~~~~~~~l~~al~~l  421 (422)
                      +++||.-   -.++...++.+|+ + +.++.+.+.++++.|
T Consensus       340 K~RgI~G---I~~G~Tk~~K~svyGl~~Eqve~V~~afkeI  377 (382)
T COG1103         340 KKRGIHG---IQPGQTKYFKLSVYGLSWEQVEYVVDAFKEI  377 (382)
T ss_pred             HhcCccc---cccCceeEEEEEeecCCHHHHHHHHHHHHHH
Confidence            7777642   2234578999996 3 456677778877765

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=99.64  E-value=5.4e-16  Score=144.65  Aligned_cols=250  Identities=22%  Similarity=0.238  Sum_probs=170.7

Q ss_pred             CCHHHHHHHhcCCCC-CCCC-CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch---hH
Q 014594          109 PPPEVREALGQLKFP-YIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT---MY  183 (422)
Q Consensus       109 ~~~~v~~al~~~~~~-~~y~-~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~---~~  183 (422)
                      +.|++++++.+...+ ..|. ++...++++.+++++|.  +..+++.+++.+..++++++++|++.|++..++|.   ..
T Consensus         7 ~~~~m~~a~~~a~~gd~~Yg~D~~~~~l~~~i~~l~g~--e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~   84 (290)
T PF01212_consen    7 PTPAMLEAMAAANVGDDAYGEDPTTARLEERIAELFGK--EAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDET   84 (290)
T ss_dssp             S-HHEEHHHHHTTSB-CCTTSSHHHHHHHHHHHHHHTS--SEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSST
T ss_pred             CCHHHHHHHHccccCCcccCCChhHHHHHHHHHHHcCC--CEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeecc
Confidence            678999999764322 3584 55688999999999995  46679999999999999999999999999999884   22


Q ss_pred             HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeEEEEeCCCCcc-CcCCCHHHHHHHHcC----CCeEEEc
Q 014594          184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPD-GSIINDEDLLKILEM----PILVVLD  253 (422)
Q Consensus       184 ~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPt-G~~~~~e~l~~i~~~----~~~li~D  253 (422)
                      .......|++++.++.+++..+|+++|++.+..     .++++|+|++|+|-. |.+++.+++++|.+.    |+.++.|
T Consensus        85 ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmD  164 (290)
T PF01212_consen   85 GAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMD  164 (290)
T ss_dssp             THHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEE
T ss_pred             chhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEe
Confidence            334456999999999766468999999999975     468999999999953 999999999999875    9999999


Q ss_pred             cCCccccC--CCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCC----c-HHHH-----HH
Q 014594          254 EAYTEFSG--LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNV----S-VAAE-----VA  321 (422)
Q Consensus       254 eay~~~~~--~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~----~-~~~~-----~a  321 (422)
                      .+-..-.-  .+..+..+..+ .+++..|++|..++++  -+.++++++++++..+.....+.    . .+..     .+
T Consensus       165 GARl~~a~~~~~~~~~e~~~~-~D~v~~~~tK~~g~~~--Gavl~~~~~~i~~~~~~~k~~gg~~~~~G~~~a~~~~~~~  241 (290)
T PF01212_consen  165 GARLANAAAALGVSLAEIAAG-ADSVSFGGTKNGGAPG--GAVLAGNKEFIAKARRQRKRLGGGMRQAGVLAAAELYQFA  241 (290)
T ss_dssp             ETTHHHHHCHHHHHHHHHHTT-SSEEEEETTSTT-SSS--EEEEEESHHHHHHHHHHHHHHTHHHHHTTHHHHHHHHHHH
T ss_pred             hhhHHHhhhcccccHHHHhhh-CCEEEEEEEccccccc--ceEEEechHHHHHHHHHHHHhccCeeecceeeeechhhHH
Confidence            98643211  01112222222 3355668999887765  46777899977665444332111    1 1111     12


Q ss_pred             HHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEE
Q 014594          322 ACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFI  365 (422)
Q Consensus       322 a~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~  365 (422)
                      +...+  +.|.....+-.++.++|.+.|+.+++..+.|..++-+
T Consensus       242 ~l~~l--~~~~~~~~~~~~~A~~La~~l~~~~~~~~~~~~tn~~  283 (290)
T PF01212_consen  242 ALRAL--ELWLERARHANAMAKRLAAGLEALGGVLPRPVETNQV  283 (290)
T ss_dssp             HHCHE--ECSHHHHHCHHHHHHCHHHCHHEECEEEETTSS-HHH
T ss_pred             HHHHH--HhhHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCcEE
Confidence            33333  3445566667788999999999988665555555433

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=99.64  E-value=1.8e-13  Score=136.40  Aligned_cols=315  Identities=17%  Similarity=0.139  Sum_probs=190.3

Q ss_pred             CCCCCCeEEcCCCCCC--C-CCCHHHHHHHhc-CCCCCCC--CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594           91 GRKPEDIVKIDANENP--Y-GPPPEVREALGQ-LKFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~~--~-~~~~~v~~al~~-~~~~~~y--~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~  164 (422)
                      +.+++.+||+..+..+  + ..+|+|.+++.+ +.....+  +.+...+|-+.|++.... .+.+.+++++++|.+.+++
T Consensus        95 D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~lAe~l~~~~p~-~~~v~f~~SGsEA~e~Alk  173 (474)
T PLN02482         95 DVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTSFGAPCLLENVLAEMVIDAVPS-VEMVRFVNSGTEACMGVLR  173 (474)
T ss_pred             ECCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHHHhCCC-CCEEEEeCChHHHHHHHHH
Confidence            4557788999776433  3 357889888876 3322222  333455777777777653 5799999999999999999


Q ss_pred             Hhc--CCCCEEEEcCCCchhHHHH--HHH-cCC-----------------EEEEecCCCCCCCCHHHHHHHhhc--CCCe
Q 014594          165 CVL--DPGDKIVDCPPTFTMYEFD--AAV-NGA-----------------AVVKVPRKSDFSLNVELIADAVER--EKPK  220 (422)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~--~~~-~g~-----------------~~~~v~~~~~~~~d~~~l~~~i~~--~~~~  220 (422)
                      .-.  ...++|+....+|++....  +.. .|.                 .++.+|    + -|++.+++.+.+  .++.
T Consensus       174 lAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~-nd~~~l~~~l~~~~~~iA  248 (474)
T PLN02482        174 LARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAP----Y-NDLEAVKKLFEANKGEIA  248 (474)
T ss_pred             HHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEec----C-CChHHHHHHHHhCCCceE
Confidence            432  2236788888888875422  111 010                 011111    1 278899888853  3567


Q ss_pred             EEEEeCCCCccCcCCCHH----HHHHHHcC-CCeEEEccCCccccCCCch-hhhhhcCCcEEEEccChhhhcccccccee
Q 014594          221 CIFLTSPNNPDGSIINDE----DLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGY  294 (422)
Q Consensus       221 ~i~l~~p~NPtG~~~~~e----~l~~i~~~-~~~li~Deay~~~~~~~~~-~~~~~~~~~~i~~~S~SK~~~~~G~r~G~  294 (422)
                      +|++.......|.+.+.+    .+.+||+. |+++|+||++..|..+... ....+..+++   .+|+|.+| .|+.+|.
T Consensus       249 avI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~~ga~~~~gv~PDi---~t~gK~lg-gG~Piga  324 (474)
T PLN02482        249 AVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAYGGAQEYFGITPDL---TTLGKVIG-GGLPVGA  324 (474)
T ss_pred             EEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCcchHhHHhCCCCCE---EEecchhh-CCCceEE
Confidence            888777777788887744    56777776 9999999999877432211 1112222332   36799998 7899999


Q ss_pred             eecCHHHHHHHHHhc-----CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC----CCCcc-cCCCceE
Q 014594          295 GAFPLSIIEYLWRAK-----QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV----PFLNP-YPSYSNF  364 (422)
Q Consensus       295 i~~~~~~~~~l~~~~-----~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~-~p~~~~f  364 (422)
                      +++++++++.+....     ..|+.++++..++.+.|+.-+-.+..++++++-+++.+.|+++    +...+ ..-.+ +
T Consensus       325 v~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g-~  403 (474)
T PLN02482        325 YGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISG-M  403 (474)
T ss_pred             EEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccce-E
Confidence            999999998875321     2356788888888777653211014555555566666655543    21111 12233 3


Q ss_pred             EEEEeCC--C--------CC---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHhh
Q 014594          365 ILCEVTS--G--------MD---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLMH  420 (422)
Q Consensus       365 ~~~~~~~--~--------~~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~~  420 (422)
                      +.+.+..  .        .+   ...+.+.|.++||++.+.....  ++  +++. +++++|++.+++++
T Consensus       404 ~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~~--~~--psl~ht~~dId~~l~al~~  469 (474)
T PLN02482        404 FGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQFEA--GF--TSLAHTEEDIDFTIAAAER  469 (474)
T ss_pred             EEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCCCC--Cc--CCCCCCHHHHHHHHHHHHH
Confidence            2233311  0        12   2467788889999998754311  12  3433 34455555555543

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=99.64  E-value=9.2e-14  Score=127.88  Aligned_cols=220  Identities=18%  Similarity=0.215  Sum_probs=161.4

Q ss_pred             CCCC---CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch----hHHHHHHHcCCEEE
Q 014594          123 PYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT----MYEFDAAVNGAAVV  195 (422)
Q Consensus       123 ~~~y---~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~  195 (422)
                      ++.|   .+|....|++.|+.+-|-  ---+.+.+++.|+..++..++++||.|+..+--|.    .+....+..|+++.
T Consensus        53 G~iYsRi~NPT~~vlE~RiAaLEGG--~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~  130 (426)
T COG2873          53 GNIYTRIMNPTTDVLEERIAALEGG--VAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVR  130 (426)
T ss_pred             CceeeeccCchHHHHHHHHHHhhcc--hhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEE
Confidence            4555   466778999999999863  23567788899999999999999999998887775    44455677999999


Q ss_pred             EecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCc
Q 014594          196 KVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDN  274 (422)
Q Consensus       196 ~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~  274 (422)
                      +++     ..|++.++++++ ++||+|++.+..||-+.+.+.|.+.+||+. |+.+|+|..+..    +-.+. .-+++.
T Consensus       131 fvd-----~~d~~~~~~aI~-~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~at----pyl~r-P~~hGA  199 (426)
T COG2873         131 FVD-----PDDPENFEAAID-ENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFAT----PYLCR-PIEHGA  199 (426)
T ss_pred             EeC-----CCCHHHHHHHhC-cccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCc----ceecc-hhhcCC
Confidence            997     346999999998 899999999999999999999999999998 999999998772    21111 125667


Q ss_pred             EEEEccChhhhccccccceeeecCHHHHHHH-----HHhcCC------------CCCcHHHHHHHHHHccC---------
Q 014594          275 LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL-----WRAKQP------------YNVSVAAEVAACAALQN---------  328 (422)
Q Consensus       275 ~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l-----~~~~~~------------~~~~~~~~~aa~~~L~~---------  328 (422)
                      .|++.|.||..|-.|--+|-++++..-.+.-     .....+            ++...+...+-...|+|         
T Consensus       200 DIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfn  279 (426)
T COG2873         200 DIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFN  279 (426)
T ss_pred             CEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcccccCcHH
Confidence            7999999998888888888777643222211     111111            12222333333333443         


Q ss_pred             -------ChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594          329 -------PIYLE-VKEALIKERERLFKLLKDVPFL  355 (422)
Q Consensus       329 -------~~~~~-~~~~~~~~~~~l~~~L~~~~~~  355 (422)
                             -|-+. +.++..++...+.+.|+.++.+
T Consensus       280 Afl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV  314 (426)
T COG2873         280 AFLLLQGLETLSLRMERHCENALKVAEFLENHPKV  314 (426)
T ss_pred             HHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCe
Confidence                   13344 7888999999999999987543

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.63  E-value=1.6e-13  Score=136.93  Aligned_cols=320  Identities=14%  Similarity=0.162  Sum_probs=197.3

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CC---CCC--CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~---~~~--~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      +.+++.+||+..+.  ..+ ..+|+|.+++.+ +.   +..  .++.+...+|.+.|++.+....+.+++++++++|++.
T Consensus        52 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~  131 (460)
T PRK06916         52 DVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLLGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEI  131 (460)
T ss_pred             eCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence            34578899987763  223 457888888865 32   221  2344445678888888875434689999999999999


Q ss_pred             HHHHhc-------CCC-CEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCC----CC--------CCHH
Q 014594          162 IMRCVL-------DPG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSD----FS--------LNVE  208 (422)
Q Consensus       162 ~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~----~~--------~d~~  208 (422)
                      +++...       .+| .+|+....+|++....+.. .|.            .+..+|....    +.        -+++
T Consensus       132 AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~  211 (460)
T PRK06916        132 AIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLE  211 (460)
T ss_pred             HHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHH
Confidence            999542       233 6789999999865443322 121            1222331110    11        1356


Q ss_pred             HHHHHhhc--CCCeEEEEeC-CCCccCcCC-CHHHHHHH---HcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEE
Q 014594          209 LIADAVER--EKPKCIFLTS-PNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVL  278 (422)
Q Consensus       209 ~l~~~i~~--~~~~~i~l~~-p~NPtG~~~-~~e~l~~i---~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~  278 (422)
                      .+++.+.+  +++.+|++.. +..-.|.+. +.+-++++   |+. |+++|.||++..|...+...  ...+..++++  
T Consensus       212 ~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv--  289 (460)
T PRK06916        212 ELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIM--  289 (460)
T ss_pred             HHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCee--
Confidence            66777642  4678888886 466678765 55555544   444 99999999998875433221  1222233333  


Q ss_pred             ccChhhhcccc-ccceeeecCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHH
Q 014594          279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKL  348 (422)
Q Consensus       279 ~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~  348 (422)
                       +++|.++ .| +.+|.+++++++.+.+..         ....|+.++++.+++.+.|+.-+-.+..++.+++-+++.+.
T Consensus       290 -~~gK~l~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~  367 (460)
T PRK06916        290 -TAGKGLT-GGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQ  367 (460)
T ss_pred             -eeehhhh-cCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence             4689987 78 599999999999887642         12246778888888888875311101455566666666666


Q ss_pred             HccC---CCCcccCCCceEEEEEeCCCC--------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhH
Q 014594          349 LKDV---PFLNPYPSYSNFILCEVTSGM--------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHT  411 (422)
Q Consensus       349 L~~~---~~~~~~p~~~~f~~~~~~~~~--------~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~  411 (422)
                      |+++   +.+.-....|.++-+++.+..        +   ...+...+.++||++.+..     +.+|+...   +.+++
T Consensus       368 l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-----~~l~~~Ppl~it~~~i  442 (460)
T PRK06916        368 LEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPLG-----NTIVFMPPLASTIDEL  442 (460)
T ss_pred             HHHhhcCCCeEEeecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEecC-----CEEEEeCCcccCHHHH
Confidence            6553   322223455666666663210        1   2467788889999998753     58899855   34444


Q ss_pred             HHHHHHHh
Q 014594          412 DALMECLM  419 (422)
Q Consensus       412 ~~l~~al~  419 (422)
                      +++.++++
T Consensus       443 d~~~~~l~  450 (460)
T PRK06916        443 DEMLRILY  450 (460)
T ss_pred             HHHHHHHH
Confidence            44444443

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=99.62  E-value=9.6e-13  Score=130.14  Aligned_cols=297  Identities=19%  Similarity=0.177  Sum_probs=188.2

Q ss_pred             CCHHHHHHHhcC-C-CC-CCC--C--Ccc--hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 014594          109 PPPEVREALGQL-K-FP-YIY--P--DPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT  179 (422)
Q Consensus       109 ~~~~v~~al~~~-~-~~-~~y--~--~~~--~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~  179 (422)
                      .++++.+++.+. . +. ..|  .  ..+  ...+++.+++++|.+  ..+++++++.++..++. .+.+||+|+++...
T Consensus        93 l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae--~alvv~sg~aAi~l~l~-~l~~GdeVIvs~~e  169 (454)
T TIGR00474        93 LAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAE--DALVVNNNAAAVLLALN-TLAKGKEVIVSRGE  169 (454)
T ss_pred             CCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHH-HhCCcCEEEECCCh
Confidence            468888888762 2 11 112  1  112  478999999999964  35567778888988886 46889999999876


Q ss_pred             chh------HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCcc--C--cCCCHHHHHHHHcC-CC
Q 014594          180 FTM------YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD--G--SIINDEDLLKILEM-PI  248 (422)
Q Consensus       180 y~~------~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt--G--~~~~~e~l~~i~~~-~~  248 (422)
                      |..      +....+..|++++.++.++  ..|+++++++++ ++|++|++++++|++  |  ...+.+++.++++. |+
T Consensus       170 ~v~~ggs~~i~~~~~~~G~~~~~v~~~~--~~~l~dle~aI~-~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~  246 (454)
T TIGR00474       170 LVEIGGSFRIPDVMEQSGAKLVEVGTTN--RTHLKDYEDAIT-ENTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGL  246 (454)
T ss_pred             hhhhcchhhHHHHHHHcCCEEEEeCCCC--CCCHHHHHHhcC-cCCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCC
Confidence            432      2345567899999997532  357999999997 789999999999995  6  58899999999997 99


Q ss_pred             eEEEccCCccccC-------CCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCCcHHHH
Q 014594          249 LVVLDEAYTEFSG-------LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAE  319 (422)
Q Consensus       249 ~li~Deay~~~~~-------~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~~~~~~  319 (422)
                      ++++|....-+..       ...........+.++++.|.+|.+|.+  ..|++++++++++++....-  ...+.....
T Consensus       247 ~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp--~~G~i~g~~~~i~~l~~~~l~r~lr~~k~~l  324 (454)
T TIGR00474       247 PVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP--QAGIIVGKKELIERLKKNPLTRALRVDKLTL  324 (454)
T ss_pred             eEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC--eEEEEEECHHHHHhhhhchhHHHHhhChHHH
Confidence            9999976332211       011111222345568999999987544  47999999998877653211  012222222


Q ss_pred             HHHHHH----ccC-ChH--------HH-HHHHHHHHHHHHHHHHccC--CCC--cccCC-----Cc-------eEEEEEe
Q 014594          320 VAACAA----LQN-PIY--------LE-VKEALIKERERLFKLLKDV--PFL--NPYPS-----YS-------NFILCEV  369 (422)
Q Consensus       320 ~aa~~~----L~~-~~~--------~~-~~~~~~~~~~~l~~~L~~~--~~~--~~~p~-----~~-------~f~~~~~  369 (422)
                      .+..+.    +.. ..|        +. ..+++.++...+.+.|++.  +.+  .+.+.     +|       .-.-+.+
T Consensus       325 a~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~  404 (454)
T TIGR00474       325 AALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTL  404 (454)
T ss_pred             HHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEE
Confidence            222222    221 112        22 4456777888888888763  222  12111     11       1112333


Q ss_pred             -CCCCCHHHHHHHHHhCC--cEEEeCCCCCCCCeEEEEecC--hhhHHHHHHHH
Q 014594          370 -TSGMDAKKLKDDLAKMG--VMIRHYNNKELKGYVRVSVGK--PEHTDALMECL  418 (422)
Q Consensus       370 -~~~~~~~~~~~~L~~~g--I~v~~~~~~~~~~~iRis~~~--~~~~~~l~~al  418 (422)
                       +.+.++.++.+.|++..  |+.+-.     ++.+-+-+.+  +.+.+.+.+++
T Consensus       405 ~~~~~~~~~l~~~lr~~~~~ii~r~~-----~~~~~ld~r~~~~~~~~~~~~~~  453 (454)
T TIGR00474       405 TPDGLSAEKLEARLRELPPPIIGRIE-----DDRFLLDLRTLLEDEEELLIEAL  453 (454)
T ss_pred             ecCCCCHHHHHHHHhcCCCCEEEEEE-----CCEEEEEeCcCCHHHHHHHHHHh
Confidence             23668899999998665  555532     4677777765  34455555544

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=99.61  E-value=2.2e-13  Score=129.82  Aligned_cols=322  Identities=20%  Similarity=0.131  Sum_probs=201.5

Q ss_pred             hCCCCCCeEEcCCCCCCC---CCCHHHHHHHhc-CCCCCCCCCc--chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           90 LGRKPEDIVKIDANENPY---GPPPEVREALGQ-LKFPYIYPDP--ESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        90 ~~~~~~~~i~l~~~~~~~---~~~~~v~~al~~-~~~~~~y~~~--~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      ++.+++.+||+..+-.|.   ..+|.|.+|+.+ +..+..|..|  ..-++-+.+.+.++. .+.|-+++++|||...++
T Consensus        48 ~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~fg~Pte~Ei~~Aell~~~~p~-~e~vrfvnSGTEAtmsAi  126 (432)
T COG0001          48 TDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLSFGAPTELEVELAELLIERVPS-IEKVRFVNSGTEATMSAI  126 (432)
T ss_pred             EeCCCCEeeehhccCcccccCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcCc-ccEEEEecchhHHHHHHH
Confidence            345678889998877665   357889999987 5556666444  345677778777773 479999999999999988


Q ss_pred             HHh--cCCCCEEEEcCCCchhHHHHHHH-cC--CEEEEecCC----CC--------CCCCHHHHHHHhhcC--CCeEEEE
Q 014594          164 RCV--LDPGDKIVDCPPTFTMYEFDAAV-NG--AAVVKVPRK----SD--------FSLNVELIADAVERE--KPKCIFL  224 (422)
Q Consensus       164 ~~l--~~~gd~Vl~~~p~y~~~~~~~~~-~g--~~~~~v~~~----~~--------~~~d~~~l~~~i~~~--~~~~i~l  224 (422)
                      +.-  ...-|+|+..+.+|+...+.+.. .|  ..-...|..    .+        ---|++.+++++++.  +..+|++
T Consensus       127 RlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIv  206 (432)
T COG0001         127 RLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIV  206 (432)
T ss_pred             HHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEe
Confidence            832  22338999999999876655443 22  111111100    00        013799999999753  7888888


Q ss_pred             eCCCCccCcCCCHHH----HHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCH
Q 014594          225 TSPNNPDGSIINDED----LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (422)
Q Consensus       225 ~~p~NPtG~~~~~e~----l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~  299 (422)
                      .....-.|.+.|.++    |++|++. |.++|.||+...|.........  .++..--+.+|.|..| .|+.+|.+.++.
T Consensus       207 EPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~--~~gi~PDlttlGKiIG-GGlP~ga~gGr~  283 (432)
T COG0001         207 EPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQG--YYGVEPDLTTLGKIIG-GGLPIGAFGGRA  283 (432)
T ss_pred             ccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCccccc--ccCcCcchhhhhhhhc-CCcceeeeccHH
Confidence            844433788777643    4555665 9999999999988643211111  1111123446889998 999999999999


Q ss_pred             HHHHHHHHhcC-----CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHc----cCCCC-cccCCCceEEEEE
Q 014594          300 SIIEYLWRAKQ-----PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLK----DVPFL-NPYPSYSNFILCE  368 (422)
Q Consensus       300 ~~~~~l~~~~~-----~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~----~~~~~-~~~p~~~~f~~~~  368 (422)
                      ++++.+.....     .++.|+++..|..+.|+.-.-.+ ..+++.+..++|.+.|+    +.+.- .+...+++|-+.-
T Consensus       284 eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F  363 (432)
T COG0001         284 EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFF  363 (432)
T ss_pred             HHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEe
Confidence            99998765543     25678888888887776422111 44455555555555554    44422 2333444443221


Q ss_pred             eCC-CC--------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014594          369 VTS-GM--------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM  419 (422)
Q Consensus       369 ~~~-~~--------~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~  419 (422)
                      .+. ..        +   ...+.+.|+++||++.|...   +.++ +|.. +++++|+..++++
T Consensus       364 ~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~---ea~f-lS~ahte~di~~~~~a~~  423 (432)
T COG0001         364 TEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQF---EAGF-LSTAHTEEDIDRTLEAAD  423 (432)
T ss_pred             cCCCCCCHHHHHhhchHHHHHHHHHHHhCCcccCCccc---ccee-eecccCHHHHHHHHHHHH
Confidence            110 11        1   23456678899999998752   2222 4554 3455555555554

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=99.61  E-value=7.8e-14  Score=134.66  Aligned_cols=262  Identities=17%  Similarity=0.174  Sum_probs=162.0

Q ss_pred             CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCC--
Q 014594          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF--  203 (422)
Q Consensus       127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~--  203 (422)
                      |..-..+-++.+|+.||.+ ...++++|+|.++.+++.+++++||+|+++..+|-+........|+++++++.. +.+  
T Consensus        64 p~G~I~eAe~~aA~~fGAd-~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi  142 (417)
T PF01276_consen   64 PEGIIKEAEELAARAFGAD-KTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGI  142 (417)
T ss_dssp             TBTHHHHHHHHHHHHHTES-EEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-
T ss_pred             CccHHHHHHHHHHHhcCCC-eEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccccCC
Confidence            3334678999999999964 578999999999999999999999999999999998888888999999998742 222  


Q ss_pred             --CCCH-----HHHHHHhhc-CCCeE---EEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccc-cCCCchhhhh-
Q 014594          204 --SLNV-----ELIADAVER-EKPKC---IFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGLESRMEWV-  269 (422)
Q Consensus       204 --~~d~-----~~l~~~i~~-~~~~~---i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~-~~~~~~~~~~-  269 (422)
                        .+++     +.+++++++ +..|+   +++++|+- .|.+++.++|.+++.. ++.|++||||... .+.+-..... 
T Consensus       143 ~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a~~  221 (417)
T PF01276_consen  143 IGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSALA  221 (417)
T ss_dssp             BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTCSS
T ss_pred             ccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccchhh
Confidence              3455     999999864 34444   99999976 9999999999999998 9999999999753 2332111111 


Q ss_pred             -----hcCCcEEEEccChhhhcccccccee-eecCH------HHHHHHHHhcCCCCCcHHH---HHHHHHHccCChHHHH
Q 014594          270 -----KKHDNLIVLRTFSKRAGLAGLRVGY-GAFPL------SIIEYLWRAKQPYNVSVAA---EVAACAALQNPIYLEV  334 (422)
Q Consensus       270 -----~~~~~~i~~~S~SK~~~~~G~r~G~-i~~~~------~~~~~l~~~~~~~~~~~~~---~~aa~~~L~~~~~~~~  334 (422)
                           .....++++.|.+|.+  +++.-+. +..+.      +-+++.....+..++|-+.   ...+...++..+..+.
T Consensus       222 ~gad~~~~~~~~vvqS~HKtL--~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G~~l  299 (417)
T PF01276_consen  222 LGADRPNDPGIIVVQSTHKTL--PALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMASLDVARAQMEEEEGREL  299 (417)
T ss_dssp             TTSS-CTSBEEEEEEEHHHHS--SS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHHHHHHHHHHHSHHHHHHH
T ss_pred             ccCccccccceeeeechhhcc--cccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhhhhhHHH
Confidence                 1123569999999975  6766554 44322      3333333344444555443   3333344422222224


Q ss_pred             HHHHHHHHHHHHHHH---ccCCCCccc-C-----CC------------------ceE------EEEEeC----------C
Q 014594          335 KEALIKERERLFKLL---KDVPFLNPY-P-----SY------------------SNF------ILCEVT----------S  371 (422)
Q Consensus       335 ~~~~~~~~~~l~~~L---~~~~~~~~~-p-----~~------------------~~f------~~~~~~----------~  371 (422)
                      .++..++.+.+++.+   +++.++.+. |     ..                  +.+      +.+..|          .
T Consensus       300 ~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~~~lDP~K~ti~~pG~~~~g~~~~~  379 (417)
T PF01276_consen  300 LEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDYYMLDPTKLTINTPGIDADGELSEL  379 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--TTSEEE-TTEEEEE-STBETTSSB-SS
T ss_pred             HHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhcccCccccCCcEEEEEccCcCcCCccccc
Confidence            444455555555555   555444321 1     11                  122      335543          2


Q ss_pred             CCCHHHHHHHHHhCCcEEEeC
Q 014594          372 GMDAKKLKDDLAKMGVMIRHY  392 (422)
Q Consensus       372 ~~~~~~~~~~L~~~gI~v~~~  392 (422)
                      |.++..+.++|+++||.+.-.
T Consensus       380 Gi~g~~~~~~L~~~~I~~Ek~  400 (417)
T PF01276_consen  380 GIPGYIVEKYLREHGIQVEKT  400 (417)
T ss_dssp             ---HHHHHHHHHHTTEE-SEE
T ss_pred             CCCHHHHHHHHHHcCCEEEec
Confidence            567888999999999998643

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.60  E-value=6.9e-13  Score=132.38  Aligned_cols=322  Identities=17%  Similarity=0.168  Sum_probs=193.7

Q ss_pred             CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHcCCCC---CCEEEe-CCHHH
Q 014594           91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLES---DHILVG-CGADE  157 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~-----~~y~~~~~~~lr~~la~~~~~~~---~~i~~~-~G~~~  157 (422)
                      ..+++.+||+..+..  .+ ..+|++.+++.+ +...     ..++.+...+|-+++.+.....-   +.++++ +++++
T Consensus        59 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSE  138 (464)
T PRK06938         59 DVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTD  138 (464)
T ss_pred             eCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhcccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHH
Confidence            456788999977742  23 357888888876 3211     12333444566666666654211   357665 79999


Q ss_pred             HHHHHHHHhc-CCC-CEEEEcCCCchhHHHHHHH-cCC------------EEEEecCCCCCC------------CCHHHH
Q 014594          158 LIDLIMRCVL-DPG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFS------------LNVELI  210 (422)
Q Consensus       158 al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~------------~d~~~l  210 (422)
                      |++.+++... -+| .+|+....+|++....+.. .|.            .+..++.+..+.            .+++.+
T Consensus       139 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l  218 (464)
T PRK06938        139 AVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYL  218 (464)
T ss_pred             HHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHH
Confidence            9999999432 133 6788888888765443322 110            123333221111            136777


Q ss_pred             HHHhhc-----CCCeEEEEeCCCCccCcCCC-HHHH---HHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEE
Q 014594          211 ADAVER-----EKPKCIFLTSPNNPDGSIIN-DEDL---LKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVL  278 (422)
Q Consensus       211 ~~~i~~-----~~~~~i~l~~p~NPtG~~~~-~e~l---~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~  278 (422)
                      ++.+.+     +++.+|++.....-.|.+.+ .+-+   +++|+. |+++|.||++..|...+...  ...+-.++++  
T Consensus       219 ~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv--  296 (464)
T PRK06938        219 ENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVV--  296 (464)
T ss_pred             HHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEE--
Confidence            887753     25788888866665677665 4444   445555 99999999999886444322  1222234444  


Q ss_pred             ccChhhhccccccceeeecCHHHHHHHHH--hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----C
Q 014594          279 RTFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----V  352 (422)
Q Consensus       279 ~S~SK~~~~~G~r~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~  352 (422)
                       +++|.++ .|+.+|.+++++++ +.+..  ...+|+.|+++.+++.+.|+.-+-.+..++.++.-+++.+.|++    +
T Consensus       297 -~~gKglg-gG~PlsAv~~~~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~  373 (464)
T PRK06938        297 -VLSKAIG-GSLPLAVVVYREWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDY  373 (464)
T ss_pred             -Eeecccc-CCCceEEEeehhHh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhC
Confidence             3589997 78999999998774 44321  22457789999988888885321111344444555555555543    4


Q ss_pred             CCCcccCCCceEEEEEeCCCC-----------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHH
Q 014594          353 PFLNPYPSYSNFILCEVTSGM-----------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALM  415 (422)
Q Consensus       353 ~~~~~~p~~~~f~~~~~~~~~-----------~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~  415 (422)
                      +.+.-....|.++.+++....           +   ...+.+.+.++|+++.+...  ..+.+|+...   +.++++++.
T Consensus       374 ~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~--~~~~l~~~Ppl~it~~eid~~~  451 (464)
T PRK06938        374 PQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELGGR--HGSVVRFLPPLIITAEQIDEVA  451 (464)
T ss_pred             CCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeecCC--CCCEEEEECCCccCHHHHHHHH
Confidence            544434567788878773210           1   34567778899999986431  2478999855   445555555


Q ss_pred             HHHh
Q 014594          416 ECLM  419 (422)
Q Consensus       416 ~al~  419 (422)
                      ++++
T Consensus       452 ~~l~  455 (464)
T PRK06938        452 EIFA  455 (464)
T ss_pred             HHHH
Confidence            5544

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=99.59  E-value=3.4e-13  Score=133.67  Aligned_cols=315  Identities=16%  Similarity=0.160  Sum_probs=187.5

Q ss_pred             CCCCCCeEEcCCCCCC--C-CCCHHHHHHHhcC--C----CCCCCCCcchHHHHHHHHH----HcCCCCCCEEEeCCHHH
Q 014594           91 GRKPEDIVKIDANENP--Y-GPPPEVREALGQL--K----FPYIYPDPESRRLRAALAK----DSGLESDHILVGCGADE  157 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~~--~-~~~~~v~~al~~~--~----~~~~y~~~~~~~lr~~la~----~~~~~~~~i~~~~G~~~  157 (422)
                      +.+++.+||+..+...  + ..+|.+.+++.+.  .    ....|+.+...++.+.+++    ...-+.+.+++++++++
T Consensus        54 D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~~~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsE  133 (464)
T TIGR00699        54 DVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRPALGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSD  133 (464)
T ss_pred             eCCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccccCCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHH
Confidence            4567889999887433  2 4578888888752  1    1122343334556666654    33323368999999999


Q ss_pred             HHHHHHHHhcC--------------------------CC---CEEEEcCCCchhHHHHHHH-cCCE-----------EEE
Q 014594          158 LIDLIMRCVLD--------------------------PG---DKIVDCPPTFTMYEFDAAV-NGAA-----------VVK  196 (422)
Q Consensus       158 al~~~~~~l~~--------------------------~g---d~Vl~~~p~y~~~~~~~~~-~g~~-----------~~~  196 (422)
                      |++.+++....                          +|   .+|+....+|++....+.. .|-.           ...
T Consensus       134 AvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~  213 (464)
T TIGR00699       134 ANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQ  213 (464)
T ss_pred             HHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCcee
Confidence            99999995410                          11   2699999999765544332 2211           111


Q ss_pred             ecCCC-C--C-----------CCCHHHHHHHhhc--CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccC
Q 014594          197 VPRKS-D--F-----------SLNVELIADAVER--EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEA  255 (422)
Q Consensus       197 v~~~~-~--~-----------~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Dea  255 (422)
                      +|... .  +           .-+++.+++.+.+  .++.+|++.......|.+.+    .++++++|+. |+++|+||+
T Consensus       214 ~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV  293 (464)
T TIGR00699       214 APFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEV  293 (464)
T ss_pred             cCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeee
Confidence            22111 0  0           0135667777743  46788988877777899887    6777777776 999999999


Q ss_pred             CccccCCCch--hhhhhc--CCcEEEEccChhhhccccccceeeecCHHHHHHHH--HhcCCCCCcHHHHHHHHHHccC-
Q 014594          256 YTEFSGLESR--MEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW--RAKQPYNVSVAAEVAACAALQN-  328 (422)
Q Consensus       256 y~~~~~~~~~--~~~~~~--~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~--~~~~~~~~~~~~~~aa~~~L~~-  328 (422)
                      +..|...+..  ....+-  .+++   .+++|.++..    |+++..+ .+....  ....+|..++++.+++.+.|+. 
T Consensus       294 ~tGfGrtG~~fa~e~~gv~~~PDi---~t~gK~lg~g----G~~~~~~-~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~l  365 (464)
T TIGR00699       294 QTGVGATGKFWAHEHWNLDDPPDM---VTFSKKFQTA----GYFFHDP-AFRPNKPYRQFNTWMGDPSRALILREIIQEI  365 (464)
T ss_pred             eeCCCCCcchhHHHhcCCCCCCCE---EEehhhhccC----Cccccch-hccCCCCcccccCCCCCHHHHHHHHHHHHHH
Confidence            9888643332  111111  1333   3568988523    4444432 221100  1223467788888888777642 


Q ss_pred             --ChHHHHHHHHHHHHHHHHHHHc----cCC-CCcccC--CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCC
Q 014594          329 --PIYLEVKEALIKERERLFKLLK----DVP-FLNPYP--SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKG  399 (422)
Q Consensus       329 --~~~~~~~~~~~~~~~~l~~~L~----~~~-~~~~~p--~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~  399 (422)
                        ++   ..++.+++-+++.+.|+    +++ .+....  ..|.++-++++.......+.+.+.++||++....    .+
T Consensus       366 ~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~~~~~~i~~~~~~~Gvl~~~~g----~~  438 (464)
T TIGR00699       366 KRKD---LLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDEAKRDKLLKKARNNGVNIGGCG----VK  438 (464)
T ss_pred             HhcC---HHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCHHHHHHHHHHHHHCCcEEecCC----CC
Confidence              23   34444444444444444    344 232233  5678888888632235678888899999997742    47


Q ss_pred             eEEEEec---ChhhHHHHHHHHhh
Q 014594          400 YVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       400 ~iRis~~---~~~~~~~l~~al~~  420 (422)
                      .+||...   +.++++.+.+++++
T Consensus       439 ~ir~~Ppl~it~~eid~~~~~l~~  462 (464)
T TIGR00699       439 AIRLRPMLVFQKHHADIFLEIISK  462 (464)
T ss_pred             eEEEeCCCCCCHHHHHHHHHHHHH
Confidence            8999976   34445555555443

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=99.58  E-value=8.3e-13  Score=130.52  Aligned_cols=283  Identities=19%  Similarity=0.162  Sum_probs=192.1

Q ss_pred             CCHHHHHHHhc-C----CCCCCCCCcc--hHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHHHHHhcC-----C---C--
Q 014594          109 PPPEVREALGQ-L----KFPYIYPDPE--SRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLD-----P---G--  170 (422)
Q Consensus       109 ~~~~v~~al~~-~----~~~~~y~~~~--~~~lr~~la~~~~~~-~~~i~~~~G~~~al~~~~~~l~~-----~---g--  170 (422)
                      +++...+.+.. +    .....||...  ..++-..+++.++.+ ...=.+|.|+|+++.+.+.+..+     .   +  
T Consensus        74 ~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~  153 (460)
T COG0076          74 VPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGK  153 (460)
T ss_pred             CHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccc
Confidence            34555555543 2    2223455321  234555566667774 33578999999999877765421     0   1  


Q ss_pred             ----CEEEEcCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCe-EEEEeCCCCccCcCCCHHHHHHHH
Q 014594          171 ----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPK-CIFLTSPNNPDGSIINDEDLLKIL  244 (422)
Q Consensus       171 ----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~-~i~l~~p~NPtG~~~~~e~l~~i~  244 (422)
                          -+|+++.-.|..+...++..|.++..++... ++.+|++++++++.+.... +|+.+-++.+||.+=|.++|.+|+
T Consensus       154 ~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia  233 (460)
T COG0076         154 PGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIA  233 (460)
T ss_pred             cCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHH
Confidence                1588999999999999999999999999665 7899999999999854333 277778999999999999999999


Q ss_pred             cC-CCeEEEccCCccccC--CCchhh-hhhcCCcEEEEccChhhhccccccceeeecCHH-HHHHHHHhcCCCC------
Q 014594          245 EM-PILVVLDEAYTEFSG--LESRME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLWRAKQPYN------  313 (422)
Q Consensus       245 ~~-~~~li~Deay~~~~~--~~~~~~-~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~-~~~~l~~~~~~~~------  313 (422)
                      +. ++++++|.||..|..  ...... ........-+..+++| ||..-..+||++.+.+ ...+......++.      
T Consensus       234 ~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK-~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~  312 (460)
T COG0076         234 EEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHK-YGLAPIGCGVVLFRDEEALRRILIFADYYLPGGGIP  312 (460)
T ss_pred             HHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECccc-ccCCCCCceEEEEECHHHhhhhhhcccccCCCCCcC
Confidence            97 999999999997652  122222 2222333445668999 6678888999998654 4444443322211      


Q ss_pred             -------Cc---HHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCCC-HHHHHHH
Q 014594          314 -------VS---VAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMD-AKKLKDD  381 (422)
Q Consensus       314 -------~~---~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~~-~~~~~~~  381 (422)
                             .+   .+.+.+....|..+++.++.++..+..+++.+.|++.+... +.++..+-+.+++++..+ ..+..+.
T Consensus       313 ~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~~~~~~~~~~~~  392 (460)
T COG0076         313 NFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDDEDTLADLSER  392 (460)
T ss_pred             ceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCCcccchhchHHH
Confidence                   11   23344444444445565588888899999999999997444 455677888899864333 4455566


Q ss_pred             HHhCCcEEEeC
Q 014594          382 LAKMGVMIRHY  392 (422)
Q Consensus       382 L~~~gI~v~~~  392 (422)
                      +.+.|..+...
T Consensus       393 ~~~~gw~v~~~  403 (460)
T COG0076         393 LDRRGWQVPAQ  403 (460)
T ss_pred             HHhcCceeecc
Confidence            66677777643

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.57  E-value=1.7e-12  Score=129.58  Aligned_cols=319  Identities=13%  Similarity=0.163  Sum_probs=188.6

Q ss_pred             CCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CCCC---C--CCCCcchHHHHHHHHHHcCCCC---CCEEEeCCHHHH
Q 014594           91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFP---Y--IYPDPESRRLRAALAKDSGLES---DHILVGCGADEL  158 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~~~---~--~y~~~~~~~lr~~la~~~~~~~---~~i~~~~G~~~a  158 (422)
                      ..+++.+||+..+..  .+ ..+|++.+++.+ +...   +  .++.+...+|.+.+.+..+...   ..+++++++++|
T Consensus        54 D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEA  133 (459)
T PRK06931         54 DVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADA  133 (459)
T ss_pred             eCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccccccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHH
Confidence            456788999988742  22 457889988876 3211   1  1333344567777777764221   134666899999


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCchhHHHHHHH-cC------------CEEEEecCCCCCC--------CCHHHH----H
Q 014594          159 IDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS--------LNVELI----A  211 (422)
Q Consensus       159 l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~--------~d~~~l----~  211 (422)
                      ++.+++...  ...++|+....+|++....+.. .|            ..+..+|.++.+.        -+.+.+    +
T Consensus       134 ve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (459)
T PRK06931        134 VEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFE  213 (459)
T ss_pred             HHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHH
Confidence            999999432  2336799899999866544432 11            1123333221111        122332    3


Q ss_pred             HHhhc-----CCCeEEEEeCCCCccCcCCC-H---HHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEc
Q 014594          212 DAVER-----EKPKCIFLTSPNNPDGSIIN-D---EDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLR  279 (422)
Q Consensus       212 ~~i~~-----~~~~~i~l~~p~NPtG~~~~-~---e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~  279 (422)
                      +.+.+     .++.+|++.....-.|.+.+ .   ++++++|+. |+++|.||++..|...+...  ...+-.++++   
T Consensus       214 ~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDiv---  290 (459)
T PRK06931        214 NFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDII---  290 (459)
T ss_pred             HHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEE---
Confidence            33321     34788888866666677664 4   344555655 99999999999886444321  1222233444   


Q ss_pred             cChhhhccccccceeeecCHHHHHHHHH--hcCCCCCcHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHc----
Q 014594          280 TFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQN---PIYLEVKEALIKERERLFKLLK----  350 (422)
Q Consensus       280 S~SK~~~~~G~r~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~~~L~----  350 (422)
                      +++|.++ .|+.+|.+++++++ +.+..  ....|+.|+++.+++.+.|+.   ++   ..++.++.-++|.+.|+    
T Consensus       291 t~gK~l~-gG~Pi~av~~~~~~-~~~~~~~~~~T~~gnpla~aaala~L~~l~~~~---l~~~~~~~G~~l~~~L~~l~~  365 (459)
T PRK06931        291 VMSKAVG-GGLPLAVLGIKKEF-DAWQPGGHTGTFRGNQLAMATGLTTLKILKEEN---LAQNAAERGEWLKAQLAELQK  365 (459)
T ss_pred             Eeccccc-CCcceeeeeeHHHH-hhccCCCCCCCCCCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHH
Confidence            4589998 78999988877664 54421  223477899998888888753   23   33444444444444443    


Q ss_pred             cCCCCcccCCCceEEEEEeCCCC-----------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHH
Q 014594          351 DVPFLNPYPSYSNFILCEVTSGM-----------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDA  413 (422)
Q Consensus       351 ~~~~~~~~p~~~~f~~~~~~~~~-----------~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~  413 (422)
                      +++.+.-....|.++.+++.+..           +   ...+...+.++||++.+...  ..+.+|+..+   +.+++++
T Consensus       366 ~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~--~~~~l~~~Ppl~it~~eid~  443 (459)
T PRK06931        366 RYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGR--NGNVVRLLPPLLITQAECEE  443 (459)
T ss_pred             hCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecCC--CCCEEEEECCCCcCHHHHHH
Confidence            45544444567778777773210           1   24566777899999986532  2478998876   3444444


Q ss_pred             HHHHHh
Q 014594          414 LMECLM  419 (422)
Q Consensus       414 l~~al~  419 (422)
                      +.++++
T Consensus       444 ~~~~l~  449 (459)
T PRK06931        444 FIDRFE  449 (459)
T ss_pred             HHHHHH
Confidence            444443

>PLN02263 serine decarboxylase

Probab=99.57  E-value=1.8e-12  Score=127.09  Aligned_cols=271  Identities=12%  Similarity=-0.017  Sum_probs=181.1

Q ss_pred             HHHHHHHHHcCCCCC--CEEEeCCHHHHHHHHHHHhcC--CCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHH
Q 014594          133 RLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE  208 (422)
Q Consensus       133 ~lr~~la~~~~~~~~--~i~~~~G~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~  208 (422)
                      ++.+.+++++|.+++  .=++|+|||+++-.++.+-.+  +...|+++.-+|......++..|.+++.||.++++.+|++
T Consensus       137 ~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~g~mD~~  216 (470)
T PLN02263        137 GVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTLVSGEIDCA  216 (470)
T ss_pred             HHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccCCCCcCcHH
Confidence            455666666788654  358899999998887775432  3347888999999999999999999999998888899999


Q ss_pred             HHHHHhhcCC--CeEEEEeCCCCccCcCCCHHHHHHHHcC-CC-----eEEEccCCccccC---CC-chhhhhhcCCcEE
Q 014594          209 LIADAVEREK--PKCIFLTSPNNPDGSIINDEDLLKILEM-PI-----LVVLDEAYTEFSG---LE-SRMEWVKKHDNLI  276 (422)
Q Consensus       209 ~l~~~i~~~~--~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~-----~li~Deay~~~~~---~~-~~~~~~~~~~~~i  276 (422)
                      +|++++.++.  +-+|+.+-...++|.+=|.+++.++++. |+     |+.+|.+|..+..   .. .....  ..+..=
T Consensus       217 aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df--~~~vDS  294 (470)
T PLN02263        217 DFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTF--KKPIGS  294 (470)
T ss_pred             HHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCC--CcCccE
Confidence            9999997443  4566667889999999999999999986 75     9999999986542   11 01111  111223


Q ss_pred             EEccChhhhccccccceeeecCHHHHHHHHHhcC-------CCCC--c---HHHHHHHHHHccCChHHHHHHHHHHHHHH
Q 014594          277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-------PYNV--S---VAAEVAACAALQNPIYLEVKEALIKERER  344 (422)
Q Consensus       277 ~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~-------~~~~--~---~~~~~aa~~~L~~~~~~~~~~~~~~~~~~  344 (422)
                      +..+.+|. +......|.++.+.+.++.+.....       ....  +   .+...+....+...++.+..++..++.++
T Consensus       295 IsvD~HK~-l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~  373 (470)
T PLN02263        295 VSVSGHKF-VGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHY  373 (470)
T ss_pred             EEECCccc-cCCCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence            44567895 4577889999988765543322110       1111  1   22223333333333444477888899999


Q ss_pred             HHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecCh---hhHHHHHHHHh
Q 014594          345 LFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKP---EHTDALMECLM  419 (422)
Q Consensus       345 l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~---~~~~~l~~al~  419 (422)
                      +.+.|++.+...+..+..+.+.++-|   +.+     ...+|..+...     ++.++|.+...   +..|+|.+.|+
T Consensus       374 l~~~l~~~g~~~~~~p~s~~V~f~~p---~~~-----~~~~gW~L~~~-----~~~~Hivvmphv~~~~id~fi~DL~  438 (470)
T PLN02263        374 LKDRLREAGISAMLNELSSTVVFERP---KDE-----EFVRRWQLACQ-----GNIAHVVVMPSVTIEKLDYFLKELV  438 (470)
T ss_pred             HHHHHHhCCCeEEeCCCceEEEEecC---chH-----HhhcceEEccC-----CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            99999998765555566666666654   111     12456666553     35689998753   33444444443

>PRK15029 arginine decarboxylase; Provisional

Probab=99.57  E-value=3.6e-12  Score=131.86  Aligned_cols=167  Identities=16%  Similarity=0.105  Sum_probs=128.4

Q ss_pred             CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCC--
Q 014594          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF--  203 (422)
Q Consensus       127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~--  203 (422)
                      |..-..+.++..|+.||.+ ...+++||+|.++.+++.+++++||+|+++..+|-+......+.|++++++..+ +.+  
T Consensus       203 p~G~I~eAq~~aA~~fgA~-~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi  281 (755)
T PRK15029        203 HTGAFGESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGI  281 (755)
T ss_pred             CCcHHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCC
Confidence            4444678999999999964 678999999999999999999999999999999998888888999999999732 122  


Q ss_pred             --CCC-----HHHHHHHhhc-CCCe--------EEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccc-cCCCch
Q 014594          204 --SLN-----VELIADAVER-EKPK--------CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGLESR  265 (422)
Q Consensus       204 --~~d-----~~~l~~~i~~-~~~~--------~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~-~~~~~~  265 (422)
                        +++     ++.+++++.+ +..|        ++++++|+- .|.+++.+++.+++.. ++.|++||||... .+.+..
T Consensus       282 ~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~~~  360 (755)
T PRK15029        282 IGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIY  360 (755)
T ss_pred             ccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhcCCeEEEECccccccccCccc
Confidence              344     8999998854 2334        899999976 9999999999999987 9999999999763 333211


Q ss_pred             h--hhh-----h-cCCcEEEEccChhhhccccccce-eeec
Q 014594          266 M--EWV-----K-KHDNLIVLRTFSKRAGLAGLRVG-YGAF  297 (422)
Q Consensus       266 ~--~~~-----~-~~~~~i~~~S~SK~~~~~G~r~G-~i~~  297 (422)
                      .  ..+     . ....++++.|.+|.+  +++.-| ++..
T Consensus       361 p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv  399 (755)
T PRK15029        361 ADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHV  399 (755)
T ss_pred             cccccccccccccCCCceEEEEchhhcc--cchhhhhhhee
Confidence            1  111     1 122349999999975  566655 4444

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=99.57  E-value=2e-12  Score=123.51  Aligned_cols=303  Identities=13%  Similarity=0.044  Sum_probs=199.7

Q ss_pred             EEcCCCCCCCCCCHHHHHHHhc-C-C----------CCCCCCCcc--hHHHHHHHHHHcCCCC-CCE-EEeCCHHHHHHH
Q 014594           98 VKIDANENPYGPPPEVREALGQ-L-K----------FPYIYPDPE--SRRLRAALAKDSGLES-DHI-LVGCGADELIDL  161 (422)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~-~-~----------~~~~y~~~~--~~~lr~~la~~~~~~~-~~i-~~~~G~~~al~~  161 (422)
                      ++|+.  .|-..|++|++++++ + +          .+|+-+...  ..+.++.+.++++++. .+| ++..|++.++++
T Consensus         6 ~nF~a--GPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea   83 (364)
T PRK12462          6 LNFSG--GPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSM   83 (364)
T ss_pred             ceecC--CCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHH
Confidence            44544  344457888887764 2 1          223334432  5678888888999843 245 555669999999


Q ss_pred             HHHHhcCCCCEEE--EcCCCch-hHHHHHHHcCCEEEEecC----CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594          162 IMRCVLDPGDKIV--DCPPTFT-MYEFDAAVNGAAVVKVPR----KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (422)
Q Consensus       162 ~~~~l~~~gd~Vl--~~~p~y~-~~~~~~~~~g~~~~~v~~----~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~  234 (422)
                      +...++.+||+++  +....|. .+...++..| ++..+..    +.+.-++++.+  .+. ++.+.|++|+....||+.
T Consensus        84 ~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~-~d~~~v~~t~NETstGv~  159 (364)
T PRK12462         84 IPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWD-ARAPFRHYVSNETVEGLQ  159 (364)
T ss_pred             HHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccC-CCCcEEEEccCCCCceEe
Confidence            9999999999654  5566664 4455666666 4444431    12234556665  222 467899999999999999


Q ss_pred             CCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc----
Q 014594          235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK----  309 (422)
Q Consensus       235 ~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~----  309 (422)
                      ++     ++.+. +.++|+|.+-..++. +-   .++++  .++..|..|.+|.+|  ++.++.+++.+++.....    
T Consensus       160 ~~-----~~~~~~~~llvvD~sS~~~s~-pi---d~~~~--dvi~agsQKnlgP~G--ltvvivs~~al~~~~~~~p~~l  226 (364)
T PRK12462        160 FP-----DAAGLPDSPLIADMSSDFMSR-PF---DVEAY--GMVYAHAQKNLGPAG--VTVAIIRRALLERVPDTLPPML  226 (364)
T ss_pred             cC-----cccccCCCeEEEEcCchhhCC-CC---ChHHc--cEEEeeccccCCCCc--eEEEEECHHHHhhccccCCchh
Confidence            97     33333 889999988664332 11   12223  477778899999887  678888988887644211    


Q ss_pred             ---------C-CCCCcHHHHHHHHHHcc---CC-hHHH-HHHHHHHHHHHHHHHHccCCCCccc---C--CCceEEEEEe
Q 014594          310 ---------Q-PYNVSVAAEVAACAALQ---NP-IYLE-VKEALIKERERLFKLLKDVPFLNPY---P--SYSNFILCEV  369 (422)
Q Consensus       310 ---------~-~~~~~~~~~~aa~~~L~---~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~---p--~~~~f~~~~~  369 (422)
                               . +++++....+++..+|+   +. +.++ +.++.+++.+.+++.+.+.++....   +  ..-+-+.+++
T Consensus       227 dy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~  306 (364)
T PRK12462        227 DFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVAFRF  306 (364)
T ss_pred             hHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCcceEEEEc
Confidence                     1 23566777776666644   23 3567 8889999999999999998733221   1  1234566777


Q ss_pred             CCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          370 TSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       370 ~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      ++.....+|.+.+.++|+.-..|..  .-+.+|+|+-   ..+..+.|.+.++.+
T Consensus       307 ~~~~l~~~f~~~a~~~gl~~lkGhr--~vgg~Ras~yna~~~e~v~~L~~fm~~f  359 (364)
T PRK12462        307 RQPRLDTLFKEQSTEAGFCGLSGHR--SIGGIRASLYNAVSEQAVSRLCAFLKDF  359 (364)
T ss_pred             CCHHHHHHHHHHHHHCCCccccCCc--ccCceEEEcCCCCCHHHHHHHHHHHHHH
Confidence            6555567888889999988765542  2466999963   456677787777654

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.56  E-value=2.3e-12  Score=135.22  Aligned_cols=282  Identities=14%  Similarity=0.117  Sum_probs=182.3

Q ss_pred             HHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhc--------CCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCC
Q 014594          132 RRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL--------DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDF  203 (422)
Q Consensus       132 ~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~  203 (422)
                      .++.+.+++..|.+...+.. +|+.++-...+.++.        ...++|+++.-.|+.....+...|.+++.++.+.++
T Consensus       533 ~elq~~l~eltGmd~~Sl~p-~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~G  611 (939)
T TIGR00461       533 AQLEKWLCSITGFDAISLQP-NSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQDG  611 (939)
T ss_pred             HHHHHHHHHHHCCCCcccCC-chHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCCC
Confidence            47888888889987433333 344433332222221        123578899989966666688899999999987778


Q ss_pred             CCCHHHHHHHhhc--CCCeEEEEeCCCCccCcCCC-HHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEE
Q 014594          204 SLNVELIADAVER--EKPKCIFLTSPNNPDGSIIN-DEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVL  278 (422)
Q Consensus       204 ~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~-~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~  278 (422)
                      .+|+++|++.+++  .++++|++++|+| +|.+-+ .+++.++++. |.++++|.++.- ...    .......+-++++
T Consensus       612 ~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~----l~~Pg~~GaDi~~  686 (939)
T TIGR00461       612 NIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVG----LTSPGDLGADVCH  686 (939)
T ss_pred             CcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCC----CCCccccCCCEEE
Confidence            9999999999974  4899999999999 899887 9999999987 899999999853 221    1112345667899


Q ss_pred             ccChhhhc----cccccceeeecCHHHHHHHHHh-----------cCC-------CCCcHHHHHHHHHHccC--ChHHH-
Q 014594          279 RTFSKRAG----LAGLRVGYGAFPLSIIEYLWRA-----------KQP-------YNVSVAAEVAACAALQN--PIYLE-  333 (422)
Q Consensus       279 ~S~SK~~~----~~G~r~G~i~~~~~~~~~l~~~-----------~~~-------~~~~~~~~~aa~~~L~~--~~~~~-  333 (422)
                      .|..|.|+    ..|-.+|++.+.+++...+...           .+.       ..-+......+..++..  .+.+. 
T Consensus       687 ~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~  766 (939)
T TIGR00461       687 LNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPK  766 (939)
T ss_pred             ecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHH
Confidence            99999654    3444579999887655544310           000       11112222333333332  23344 


Q ss_pred             HHHHHHHHHHHHHHHHccCCCCcccCC-CceE---EEEEeCC-----CCCHHHHHHHHHhCCcEEEeCCCCCCCC--eEE
Q 014594          334 VKEALIKERERLFKLLKDVPFLNPYPS-YSNF---ILCEVTS-----GMDAKKLKDDLAKMGVMIRHYNNKELKG--YVR  402 (422)
Q Consensus       334 ~~~~~~~~~~~l~~~L~~~~~~~~~p~-~~~f---~~~~~~~-----~~~~~~~~~~L~~~gI~v~~~~~~~~~~--~iR  402 (422)
                      ..+....+..++.+.|++. ....++. .+.+   +.+++++     +.+..++.++|.++|+..-... +...+  .||
T Consensus       767 ~a~~ailnAnYl~~rL~~~-~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~~-~pv~g~lmie  844 (939)
T TIGR00461       767 ASVVAILNANYMATRLKDH-YPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTLS-FPVPGTLMVE  844 (939)
T ss_pred             HHHHHHHHHHHHHHHhhcc-CcccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccccC-CccCCeEEEE
Confidence            6666777888999999873 2223332 2221   3345542     4678999999999998754432 22333  455


Q ss_pred             EEec-ChhhHHHHHHHHhhh
Q 014594          403 VSVG-KPEHTDALMECLMHL  421 (422)
Q Consensus       403 is~~-~~~~~~~l~~al~~l  421 (422)
                      .+-. +.+++|++.+++..|
T Consensus       845 pTE~eskeelD~f~~al~~I  864 (939)
T TIGR00461       845 PTESESLEELDRFCDAMIAI  864 (939)
T ss_pred             eeccCCHHHHHHHHHHHHHH
Confidence            5544 355677788877654

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.55  E-value=7e-12  Score=133.70  Aligned_cols=319  Identities=13%  Similarity=0.057  Sum_probs=194.5

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhc-CCC--CCCC-CC---cc----hHHHHHHHHHHcCCCCCCEEEeC-CHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQ-LKF--PYIY-PD---PE----SRRLRAALAKDSGLESDHILVGC-GADELIDLI  162 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~--~~~y-~~---~~----~~~lr~~la~~~~~~~~~i~~~~-G~~~al~~~  162 (422)
                      ..+|.|++..+.+.  |.+...+.. -..  .+-| |.   .|    ..++.+.+++++|.+  ++-+.. |++++....
T Consensus       499 ~~~i~lGsct~~~~--p~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d--~~sl~~~~ga~ge~ag  574 (954)
T PRK05367        499 RSMIPLGSCTMKLN--AAAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEITGYD--AVSLQPNAGAQGEYAG  574 (954)
T ss_pred             cceeeCCcCCCcCC--HHHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHHHCCC--CEEECccHHHHHHHHH
Confidence            34677887666554  333333332 222  1334 31   12    246778888888975  455544 454444332


Q ss_pred             HHHh----cCCCC----EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC--CCeEEEEeCCCCccC
Q 014594          163 MRCV----LDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDG  232 (422)
Q Consensus       163 ~~~l----~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG  232 (422)
                      +.++    .++||    +|+++...|......+...|.+++.++.+.+..+|+++|++++.+.  ++.+|++++|++-.+
T Consensus       575 L~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~  654 (954)
T PRK05367        575 LLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGV  654 (954)
T ss_pred             HHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCee
Confidence            3222    35565    5999999998777778889999999998777799999999999643  577888889988644


Q ss_pred             cCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhc----cccccceeeecCHHHHHHHHH
Q 014594          233 SIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG----LAGLRVGYGAFPLSIIEYLWR  307 (422)
Q Consensus       233 ~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~----~~G~r~G~i~~~~~~~~~l~~  307 (422)
                      ...+.+++.++++. |+++++|.++......-.   .....+-++++.+.+|.|+    .+|-.+|++.+...+...+..
T Consensus       655 ~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~---~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg  731 (954)
T PRK05367        655 FEETIREICEIVHEHGGQVYLDGANMNAQVGLA---RPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPG  731 (954)
T ss_pred             ecCCHHHHHHHHHHcCCEEEEECcChhhccCCC---ChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCC
Confidence            45789999999987 999999999963211111   1123445688889999864    233347788877655544322


Q ss_pred             hc-----C---CCCC--cHH----HHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCce---EEEE
Q 014594          308 AK-----Q---PYNV--SVA----AEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSN---FILC  367 (422)
Q Consensus       308 ~~-----~---~~~~--~~~----~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~---f~~~  367 (422)
                      ..     .   ...+  +..    ....+...+..  .+.+. ..+....+.+++.+.|++.-.+......+.   =..+
T Consensus       732 ~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~  811 (954)
T PRK05367        732 HPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECIL  811 (954)
T ss_pred             CccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEE
Confidence            11     0   0111  122    11112222322  23333 555555788899998876311111111111   1222


Q ss_pred             E---eCC--CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          368 E---VTS--GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       368 ~---~~~--~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      +   ++.  +.+.+++.++|.++|+.....+ +...+.+||++.   +.+++|+|.++++.|
T Consensus       812 ~~~~~~~~~g~~~~di~krL~d~G~~~~t~~-~pv~~~l~i~ptE~~s~~elDr~~~al~~i  872 (954)
T PRK05367        812 DLRPLKESTGITVDDIAKRLIDYGFHAPTMS-FPVAGTLMVEPTESESKAELDRFCDAMIAI  872 (954)
T ss_pred             EeecccccCCCCHHHHHHHHHHCCCeEeecC-CccCCEEEEEeeecCCHHHHHHHHHHHHHH
Confidence            2   332  4578899999999999887633 334788999976   456677777777654

>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]

Probab=99.54  E-value=1.4e-12  Score=120.68  Aligned_cols=322  Identities=16%  Similarity=0.132  Sum_probs=212.1

Q ss_pred             CCCCCCeEEcCCCCCC---CCCCHHHHHHHhc-CC---C-CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           91 GRKPEDIVKIDANENP---YGPPPEVREALGQ-LK---F-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~~---~~~~~~v~~al~~-~~---~-~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      +..++.++|+-.|...   -..+|++.+++.+ +.   + ...|-.+...++.++|++.+.-+-+.++++|+++||.+++
T Consensus        46 De~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANela  125 (442)
T KOG1404|consen   46 DEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSGYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELA  125 (442)
T ss_pred             cCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeeccccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHH
Confidence            4456677777766432   2568999988876 21   1 2456666678999999999976667899999999999999


Q ss_pred             HHHhc--CCCCEEEEcCCCchhHHHHH-HHcCCEEEEecCCCC----------------CCCC---------HHHHHHHh
Q 014594          163 MRCVL--DPGDKIVDCPPTFTMYEFDA-AVNGAAVVKVPRKSD----------------FSLN---------VELIADAV  214 (422)
Q Consensus       163 ~~~l~--~~gd~Vl~~~p~y~~~~~~~-~~~g~~~~~v~~~~~----------------~~~d---------~~~l~~~i  214 (422)
                      ++...  ...-.++....+|++....+ -..|......+.+..                |+-+         .++++..+
T Consensus       126 l~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i  205 (442)
T KOG1404|consen  126 LKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLI  205 (442)
T ss_pred             HHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHH
Confidence            88531  12235777777776443332 223332222211000                1111         24444444


Q ss_pred             hc---CCCeEEEEeCCCCccCcCCCH----HHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhc
Q 014594          215 ER---EKPKCIFLTSPNNPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG  286 (422)
Q Consensus       215 ~~---~~~~~i~l~~p~NPtG~~~~~----e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~  286 (422)
                      ..   ..+.+++....+...|.+-.+    +...++++. |.+.|.||++..|...+ .+..++.++.+--+-|++|.+|
T Consensus       206 ~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG-~~wgfe~h~v~PDIvTmAKgiG  284 (442)
T KOG1404|consen  206 LYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG-HMWGFESHGVVPDIVTMAKGIG  284 (442)
T ss_pred             HhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc-ccccccccCCCccHHHHHhhcc
Confidence            32   346677777877777777654    455666666 99999999999998776 4444556666666789999998


Q ss_pred             cccccceeeecCHHHHHHHHHhcC---CCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC----CCCcccC
Q 014594          287 LAGLRVGYGAFPLSIIEYLWRAKQ---PYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV----PFLNPYP  359 (422)
Q Consensus       287 ~~G~r~G~i~~~~~~~~~l~~~~~---~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p  359 (422)
                       .|..+|.++..+++.+-+.+...   .|+.++++.+++.++|+--+...++++..+...+|.+.|.++    +.+--.+
T Consensus       285 -nG~Pl~AVvtt~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vikee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVR  363 (442)
T KOG1404|consen  285 -NGFPLGAVVTTPEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKEENLQENAAEVGSYLLEKLAALKDKHPIIGDVR  363 (442)
T ss_pred             -CCCcceeeecCHHHHHHHHhccccccccCCCchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcCCceeecc
Confidence             88999999999999999987763   367788888888888864322226666777777777777654    3232346


Q ss_pred             CCceEEEEEeCCCC---------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHH
Q 014594          360 SYSNFILCEVTSGM---------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALME  416 (422)
Q Consensus       360 ~~~~f~~~~~~~~~---------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~  416 (422)
                      ..|.++-+++-+..         ....+.+.+++.|+.|--+.-.  .+.+||+..   +.++.|-+.+
T Consensus       364 G~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~--G~vfriaPPlciT~edi~f~~~  430 (442)
T KOG1404|consen  364 GRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIH--GNVFRIAPPLCITKEDIDFAVE  430 (442)
T ss_pred             cceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeeccccc--ceEEEecCCeeccHHHHHHHHH
Confidence            67888877764211         1335668889999999544322  359999964   4444444443

>PRK13578 ornithine decarboxylase; Provisional

Probab=99.53  E-value=1.2e-11  Score=126.84  Aligned_cols=168  Identities=14%  Similarity=0.202  Sum_probs=123.9

Q ss_pred             CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH-HHHcCCEEEEecCC-CCC-
Q 014594          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD-AAVNGAAVVKVPRK-SDF-  203 (422)
Q Consensus       127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~~~~g~~~~~v~~~-~~~-  203 (422)
                      |..-..+-++..|+.||.+ ...+++||+|.++.+++.+++.+||.|++...+|-+.... ..+.|++++++..+ +.+ 
T Consensus       172 ~eG~i~eAq~~AA~~fgAd-~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~G  250 (720)
T PRK13578        172 HEGAAKDAQKHAAKVFNAD-KTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFG  250 (720)
T ss_pred             CChHHHHHHHHHHHHhCCC-ceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccccC
Confidence            3334678899999999964 5789999999999999999999999999999999877764 67899999998732 222 


Q ss_pred             ---CCCH-----HHHHHHhhcC--------C-CeEEEEeCCCCccCcCCCHHHHHHHH-cCCCeEEEccCCcccc-CCCc
Q 014594          204 ---SLNV-----ELIADAVERE--------K-PKCIFLTSPNNPDGSIINDEDLLKIL-EMPILVVLDEAYTEFS-GLES  264 (422)
Q Consensus       204 ---~~d~-----~~l~~~i~~~--------~-~~~i~l~~p~NPtG~~~~~e~l~~i~-~~~~~li~Deay~~~~-~~~~  264 (422)
                         ++++     +.+++++.+.        + .|++++++|+- .|.+++.+++.+++ +..-.|++||||..+. +.+.
T Consensus       251 i~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~ydi~~I~~~~~h~~~~llvDEAhgah~~F~p~  329 (720)
T PRK13578        251 FIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYNARQVVDKIGHLCDYILFDSAWVGYEQFIPM  329 (720)
T ss_pred             CcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeecHHHHHHHhhccCCcEEEeCcchhhhccCcc
Confidence               3454     4488888643        1 58899998876 99999999999984 5533999999997643 3221


Q ss_pred             ---hh-hhh---hcCCcEEEEccChhhhccccccce-eeecC
Q 014594          265 ---RM-EWV---KKHDNLIVLRTFSKRAGLAGLRVG-YGAFP  298 (422)
Q Consensus       265 ---~~-~~~---~~~~~~i~~~S~SK~~~~~G~r~G-~i~~~  298 (422)
                         .. ..+   .+.+.++++.|.+|.+  +++--+ ++..+
T Consensus       330 ~~~~p~~al~~GaD~p~i~v~QStHKtL--~alTQaS~LHvk  369 (720)
T PRK13578        330 MADCSPLLLELNENDPGIFVTQSVHKQQ--AGFSQTSQIHKK  369 (720)
T ss_pred             cccCChhhhhcCCCCCCeEEEEChhhcc--hhhhhHhhhhcC
Confidence               11 111   1234468999999975  565544 44443

>PLN02880 tyrosine decarboxylase

Probab=99.53  E-value=5.3e-12  Score=126.72  Aligned_cols=288  Identities=14%  Similarity=0.099  Sum_probs=176.2

Q ss_pred             HHHHHHHHHHcCCCCC-------CEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEcCCCchhHHHHHHHcCCE
Q 014594          132 RRLRAALAKDSGLESD-------HILVGCGADELIDLIMRCVLD-----------PGDKIVDCPPTFTMYEFDAAVNGAA  193 (422)
Q Consensus       132 ~~lr~~la~~~~~~~~-------~i~~~~G~~~al~~~~~~l~~-----------~gd~Vl~~~p~y~~~~~~~~~~g~~  193 (422)
                      .++.+++++++|.+.+       .-++|+|+++++-.++.+-.+           +.-.|++++-+|......+...|..
T Consensus       125 ~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg  204 (490)
T PLN02880        125 MIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIH  204 (490)
T ss_pred             HHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCC
Confidence            3466666677787643       367889989887665543211           1124567888899999999999984


Q ss_pred             ---EEEecCC--CCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCC
Q 014594          194 ---VVKVPRK--SDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL  262 (422)
Q Consensus       194 ---~~~v~~~--~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~  262 (422)
                         ++.||.+  .++.+|++.|++++.+.     .+-+|+.+-....||.+-|.++|.++|+. |+|+++|.+|..+...
T Consensus       205 ~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~  284 (490)
T PLN02880        205 PENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACI  284 (490)
T ss_pred             HHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHh
Confidence               7778864  36789999999999642     24456666778899999999999999998 9999999999976421


Q ss_pred             -Cchhhhhhc-CCcEEEEccChhhhccccccceeeecCH--HHHHHHHHh----cC-------C-----CCC---c---H
Q 014594          263 -ESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL--SIIEYLWRA----KQ-------P-----YNV---S---V  316 (422)
Q Consensus       263 -~~~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~--~~~~~l~~~----~~-------~-----~~~---~---~  316 (422)
                       +.....+.. ..-+-+..+++|.+ .....+|+++++.  .+.+.+...    ..       .     |++   .   .
T Consensus       285 ~~~~~~~l~gie~aDSit~d~HKwl-~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~a  363 (490)
T PLN02880        285 CPEYRHYIDGVEEADSFNMNAHKWF-LTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRS  363 (490)
T ss_pred             CHHHHHHhcCchhcCEEEECchhhc-CCCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcCCCCcccH
Confidence             111111211 22346677899954 5777889888753  222222110    00       0     111   0   1


Q ss_pred             HHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCC-CCCH-------HHHHHHHHhCCc
Q 014594          317 AAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS-GMDA-------KKLKDDLAKMGV  387 (422)
Q Consensus       317 ~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~-~~~~-------~~~~~~L~~~gI  387 (422)
                      +...+....+..+.+.+..++..+..+++.+.|++.+... +.|...+.+.+++++ ..+.       .++.+.|.+.|-
T Consensus       364 lklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~  443 (490)
T PLN02880        364 LKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGK  443 (490)
T ss_pred             HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCC
Confidence            1111122222222222255555688999999998876555 345566677777753 2221       345566664454


Q ss_pred             EEEeCCCCCCCCeEEEEecC----hhhHHHHHHHHhh
Q 014594          388 MIRHYNNKELKGYVRVSVGK----PEHTDALMECLMH  420 (422)
Q Consensus       388 ~v~~~~~~~~~~~iRis~~~----~~~~~~l~~al~~  420 (422)
                      .........+..++|+++..    .++++.+.+.+++
T Consensus       444 ~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~  480 (490)
T PLN02880        444 IFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQD  480 (490)
T ss_pred             EEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence            43332322335799999753    3455555555543

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=99.52  E-value=2.8e-11  Score=123.95  Aligned_cols=285  Identities=12%  Similarity=0.095  Sum_probs=176.0

Q ss_pred             CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCC--
Q 014594          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF--  203 (422)
Q Consensus       127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~--  203 (422)
                      |..-..+-++..|+.||.+ ...+++||++.++.+++.+++.+||.|++...+|-+......+.|+++++++.. +.+  
T Consensus       193 ~~G~i~eAe~~aA~~fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi  271 (713)
T PRK15399        193 HTGPHLEAEEYIARTFGAE-QSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGI  271 (713)
T ss_pred             CChHHHHHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccCC
Confidence            3334678889999999964 578999999999999999999999999999999988877888899999998733 222  


Q ss_pred             --CCCH-----HHHHHHhhcC----CCeEEEEeCCCCccCcCCCHHHHHHHHcCCCeE-EEccCCcccc-CCC-----ch
Q 014594          204 --SLNV-----ELIADAVERE----KPKCIFLTSPNNPDGSIINDEDLLKILEMPILV-VLDEAYTEFS-GLE-----SR  265 (422)
Q Consensus       204 --~~d~-----~~l~~~i~~~----~~~~i~l~~p~NPtG~~~~~e~l~~i~~~~~~l-i~Deay~~~~-~~~-----~~  265 (422)
                        ++++     +.+++++.+.    +++++++++| +-.|.+++.+++.+++  |+.+ ++||||..+. +.+     +.
T Consensus       272 ~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~~--g~~~ilvDEAhgah~~F~p~~~~~sa  348 (713)
T PRK15399        272 LGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQTL--DVPSIHFDSAWVPYTHFHPIYQGKSG  348 (713)
T ss_pred             cCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHHh--CCCEEEEeccchhhhhcCcccCCcCh
Confidence              3445     8899888642    3368888888 5599999999998888  5655 6999998643 222     11


Q ss_pred             hhhh-hcCCcEEEEccChhhhccccccce-eeecCH----HHHHHHHHhcCCCCCcHH---HHHHHHHHccCChHHHHHH
Q 014594          266 MEWV-KKHDNLIVLRTFSKRAGLAGLRVG-YGAFPL----SIIEYLWRAKQPYNVSVA---AEVAACAALQNPIYLEVKE  336 (422)
Q Consensus       266 ~~~~-~~~~~~i~~~S~SK~~~~~G~r~G-~i~~~~----~~~~~l~~~~~~~~~~~~---~~~aa~~~L~~~~~~~~~~  336 (422)
                      +... .....++++.|.+|.+  +++.-+ ++..+.    +-++......+..+++-+   +...+.+.++.....+..+
T Consensus       349 m~~~~~aD~~i~~tQStHKtL--~alTQaS~iHvk~~vd~~~~n~a~~m~~STSPsY~LmASLD~a~~~m~~~~G~~l~~  426 (713)
T PRK15399        349 MSGERVPGKVIFETQSTHKML--AAFSQASLIHIKGEYDEETFNEAFMMHTSTSPSYPIVASVETAAAMLRGNPGKRLIN  426 (713)
T ss_pred             hhCCCCCCeeeeeeeehhccc--cccchheeeeecCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence            1111 1122345589999975  566544 444422    222222223333334333   2333334444222112333


Q ss_pred             HHHHHHHHHHHHHccCC-----C-CcccC--------------C----------------CceEEEEEeC----------
Q 014594          337 ALIKERERLFKLLKDVP-----F-LNPYP--------------S----------------YSNFILCEVT----------  370 (422)
Q Consensus       337 ~~~~~~~~l~~~L~~~~-----~-~~~~p--------------~----------------~~~f~~~~~~----------  370 (422)
                      ...+....+++.+.+++     | +.+..              .                +-.=+.+..|          
T Consensus       427 ~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~  506 (713)
T PRK15399        427 RSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSE  506 (713)
T ss_pred             HHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEecCccccccccc
Confidence            33344444444443322     1 11111              0                0011334443          


Q ss_pred             CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeE--EEEec-ChhhHHHHHHHHhhh
Q 014594          371 SGMDAKKLKDDLAKMGVMIRHYNNKELKGYV--RVSVG-KPEHTDALMECLMHL  421 (422)
Q Consensus       371 ~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~i--Ris~~-~~~~~~~l~~al~~l  421 (422)
                      .|..+..+.+.|.++||.+--.+.    ..+  =++++ +.++.++|..+|.++
T Consensus       507 ~Gi~g~~l~~~L~e~gI~~E~~d~----~~vL~l~s~g~t~~~~~~L~~aL~~f  556 (713)
T PRK15399        507 EGIPAALVAKFLDERGIVVEKTGP----YNLLFLFSIGIDKTKAMGLLRGLTEF  556 (713)
T ss_pred             CCCCHHHHHHHHHHcCCEEEecCC----CeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            156788899999999999986652    223  23343 445567787777654

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=99.52  E-value=8e-12  Score=120.62  Aligned_cols=316  Identities=16%  Similarity=0.155  Sum_probs=199.4

Q ss_pred             CCCCeEEcCCC---CCCCCCCHHHHHHHhc----CCCCCCC--CCcchHHHHHHHHHHcC-CCCCCEEEeCCHHHHHHHH
Q 014594           93 KPEDIVKIDAN---ENPYGPPPEVREALGQ----LKFPYIY--PDPESRRLRAALAKDSG-LESDHILVGCGADELIDLI  162 (422)
Q Consensus        93 ~~~~~i~l~~~---~~~~~~~~~v~~al~~----~~~~~~y--~~~~~~~lr~~la~~~~-~~~~~i~~~~G~~~al~~~  162 (422)
                      +++.++|--++   .|--...|++.+|+.+    +.+.+.+  ......+|-++|++..+ -+-++|++++|++++++.+
T Consensus        42 ~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtA  121 (449)
T COG0161          42 DGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEPAIELAEKLAELAPEGGLDHVFFTDSGSEAVETA  121 (449)
T ss_pred             CCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccCCchHHHHHHHHHHhCCCCCccEEEEeCCchHHHHHH
Confidence            34556665444   1222346788888765    3332111  11126788888888887 4468999999999999999


Q ss_pred             HHHhc-------CCC-CEEEEcCCCchhHHHHHHHcCC--------------EEEEecCCC--------CCC----CCHH
Q 014594          163 MRCVL-------DPG-DKIVDCPPTFTMYEFDAAVNGA--------------AVVKVPRKS--------DFS----LNVE  208 (422)
Q Consensus       163 ~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~~g~--------------~~~~v~~~~--------~~~----~d~~  208 (422)
                      ++...       +|. .+++.-..+|++-...+...|.              .+..++...        ...    -..+
T Consensus       122 lKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~  201 (449)
T COG0161         122 LKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAAD  201 (449)
T ss_pred             HHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHH
Confidence            98542       233 3488888888643332221111              122222111        011    2256


Q ss_pred             HHHHHhhc---CCCeEEEEeCCCCc-cCcCCCH----HHHHHHHcC-CCeEEEccCCccccCCCchhhh--hhcCCcEEE
Q 014594          209 LIADAVER---EKPKCIFLTSPNNP-DGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIV  277 (422)
Q Consensus       209 ~l~~~i~~---~~~~~i~l~~p~NP-tG~~~~~----e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~--~~~~~~~i~  277 (422)
                      +|++.+.+   ++..++++.....- .|..++.    +++++||+. |+++|.||+-..|...+.....  .+-.++++ 
T Consensus       202 ~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~-  280 (449)
T COG0161         202 ELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDIL-  280 (449)
T ss_pred             HHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCee-
Confidence            77887765   45678887755554 8888775    567778887 9999999999999876654332  22233334 


Q ss_pred             EccChhhhccccccceeeecCHHHHHHHHHh-c------CCCCCcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHH
Q 014594          278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-K------QPYNVSVAAEVAACAALQ---NPIYLEVKEALIKERERLFK  347 (422)
Q Consensus       278 ~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~-~------~~~~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~  347 (422)
                        +++|.+...=+.+|.+++.+++.+.+..- .      .+|+.++++.+++.+.|+   ++++++   +.++.-.++.+
T Consensus       281 --~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~l~~---~~~~~~~~l~~  355 (449)
T COG0161         281 --CLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEEDLLE---RVAEIGAYLQA  355 (449)
T ss_pred             --eecccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcCHHH---HHHHHHHHHHH
Confidence              46798763337788888999999988764 1      247789999988887775   344444   44455555555


Q ss_pred             HHcc----CCCCcccCCCceEEEEEeCCCCC---------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe---cChhhH
Q 014594          348 LLKD----VPFLNPYPSYSNFILCEVTSGMD---------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSV---GKPEHT  411 (422)
Q Consensus       348 ~L~~----~~~~~~~p~~~~f~~~~~~~~~~---------~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~---~~~~~~  411 (422)
                      .|++    .+.+.-....|.+.-+++....+         ...+.+.+.++|+++||..     +.+=++.   .+.+++
T Consensus       356 ~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g-----~~i~~~PPliit~~ei  430 (449)
T COG0161         356 GLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPLG-----DVIYLMPPLIITREEI  430 (449)
T ss_pred             HHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeecC-----CEEEEcCCccCCHHHH
Confidence            5544    34444456677777788754333         5577788889999999985     3444443   256666


Q ss_pred             HHHHHHHh
Q 014594          412 DALMECLM  419 (422)
Q Consensus       412 ~~l~~al~  419 (422)
                      +++.+++.
T Consensus       431 d~l~~~l~  438 (449)
T COG0161         431 DELVDALR  438 (449)
T ss_pred             HHHHHHHH
Confidence            76666654

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.52  E-value=1e-11  Score=129.64  Aligned_cols=321  Identities=12%  Similarity=0.077  Sum_probs=194.3

Q ss_pred             CeEEcCCCCCCCCCCHHHHHH-HhcCCCCCCC-C---Ccch----HHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 014594           96 DIVKIDANENPYGPPPEVREA-LGQLKFPYIY-P---DPES----RRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~a-l~~~~~~~~y-~---~~~~----~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l  166 (422)
                      .++.|++..+-+++-....-+ ..++...+-| |   ..|+    .++++.+++..|.+.-.+...+|++ +-...+.++
T Consensus       501 ~~~~LGsCTmK~n~~~~~~p~s~~eF~t~hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~~Sl~p~sGA~-gE~A~Lmai  579 (954)
T PRK12566        501 SMIPLGSCTMKLNATSEMIPITWPEFAQLHPFAPREQAEGYRAMIDELEAWLCAITGFDAICMQPNSGAQ-GEYAGLLAI  579 (954)
T ss_pred             CcccCcccccCcCcHHhhhcccchhhhcCCCCCchhhhcCHHHHHHHHHHHHHHHHCCCeEeecCCchHH-HHHHHHHHH
Confidence            357777765555543332222 1222222455 4   2243    4788888888897654444434443 332333322


Q ss_pred             ----cCC----CCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCccCcCCC
Q 014594          167 ----LDP----GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIIN  236 (422)
Q Consensus       167 ----~~~----gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~  236 (422)
                          +.+    .++|+++.-.|+.....+...|.+++.++.+++..+|+++|++.+++  .++.+|++++|++-.+...+
T Consensus       580 r~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~  659 (954)
T PRK12566        580 RRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVIVECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEG  659 (954)
T ss_pred             HHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecch
Confidence                222    25788888888544555777899999999876779999999999863  56778888899886666666


Q ss_pred             HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcc----ccccceeeecCHHHHHHHHHhc--
Q 014594          237 DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL----AGLRVGYGAFPLSIIEYLWRAK--  309 (422)
Q Consensus       237 ~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~----~G~r~G~i~~~~~~~~~l~~~~--  309 (422)
                      .+++.++++. |+++++|.++.--.   ..+......+.+++++++.|.|+.    .|.-+|.+.+.+++...+....  
T Consensus       660 V~eI~~iah~~Galv~vDgA~~~a~---~~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~  736 (954)
T PRK12566        660 IREICEVVHQHGGQVYMDGANLNAQ---VGLARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVV  736 (954)
T ss_pred             HHHHHHHHHHcCCEEEEEeeChhhc---cCCCChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCc
Confidence            8888888886 99999999986211   111212345667999999997752    2444666666665554444221  


Q ss_pred             -------CCC------CCcHHHHHHHHHHccCChH-HH-HHHHHHHHHHHHHHHHccCCCCcccCCCceE---EEEE---
Q 014594          310 -------QPY------NVSVAAEVAACAALQNPIY-LE-VKEALIKERERLFKLLKDVPFLNPYPSYSNF---ILCE---  368 (422)
Q Consensus       310 -------~~~------~~~~~~~~aa~~~L~~~~~-~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f---~~~~---  368 (422)
                             ...      ..+.....++...+..-++ +. ..+....+..++.+.|.+.-.+...+..+.|   ..++   
T Consensus       737 d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~eLk~aa~~ailnAnYla~rL~~~~~v~~~~~~~~~~hEfii~~~~  816 (954)
T PRK12566        737 PVEGPDPNNGAVSAAPWGSASILPISWMYIAMMGPQLADASEVAILSANYLANQLGGAFPVLYRGRNERVAHECILDLRP  816 (954)
T ss_pred             CCCCCCCCCCceeecccchHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHhHhhCCCCcCCCCCCeeeEEEEEccc
Confidence                   001      1122223334444433111 33 4444567888888888763222222222331   1123   


Q ss_pred             eC--CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          369 VT--SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       369 ~~--~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      ++  .+.+.+++.++|.++||..-.. .+...+++||+..   +.+++|+|.++++.+
T Consensus       817 l~~~~g~~~~dvakRL~d~Gihapt~-~fPv~~~LmIepTE~eskeEIDrf~eAL~~I  873 (954)
T PRK12566        817 LKAQTGISEEDVAKRLMDYGFHAPTM-SFPVPGTLMVEPTESESKAELDRFVEAMLSI  873 (954)
T ss_pred             cccccCCCHHHHHHHHHHCCcEEeEE-eeccCCEEEEEeeeeCCHHHHHHHHHHHHHH
Confidence            33  2467788999999999987553 3334789999975   567788888888765

>PRK08297 L-lysine aminotransferase; Provisional

Probab=99.51  E-value=9.8e-12  Score=123.64  Aligned_cols=315  Identities=14%  Similarity=0.111  Sum_probs=181.0

Q ss_pred             CCCCeEEcCCCC--CCC-CCCHHHHH--HHhc-C---C--CC--CCCCCcchHHHHHHHHHHc-CCCCCCEEEeCCHHHH
Q 014594           93 KPEDIVKIDANE--NPY-GPPPEVRE--ALGQ-L---K--FP--YIYPDPESRRLRAALAKDS-GLESDHILVGCGADEL  158 (422)
Q Consensus        93 ~~~~~i~l~~~~--~~~-~~~~~v~~--al~~-~---~--~~--~~y~~~~~~~lr~~la~~~-~~~~~~i~~~~G~~~a  158 (422)
                      +++.++|+..+.  ..+ ..+|++.+  ++.+ +   .  ..  ..|..+...++-++|++.. .-..+.+++++++++|
T Consensus        43 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEA  122 (443)
T PRK08297         43 TGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLGDPELPHLFFVDGGALA  122 (443)
T ss_pred             CCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHH
Confidence            577889987763  333 35678887  7764 2   1  11  1233444556777777766 2234699999999999


Q ss_pred             HHHHHHHhc--------CCC------CEEEEcCCCchhHHHHHHH-cCCEE-----------EEecCCC------CCC--
Q 014594          159 IDLIMRCVL--------DPG------DKIVDCPPTFTMYEFDAAV-NGAAV-----------VKVPRKS------DFS--  204 (422)
Q Consensus       159 l~~~~~~l~--------~~g------d~Vl~~~p~y~~~~~~~~~-~g~~~-----------~~v~~~~------~~~--  204 (422)
                      ++.+++...        ..|      .+|+....+|++....+.. .|...           ..++...      +..  
T Consensus       123 ve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (443)
T PRK08297        123 VENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLE  202 (443)
T ss_pred             HHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccc
Confidence            999999541        012      5799999999866544433 22110           0011000      000  


Q ss_pred             -------CCHHHHHHHhhc--CCCeEEEEeCCCCccCcC-CCHHHHHH---HHcC-CCeEEEccCCccccCCCchh--hh
Q 014594          205 -------LNVELIADAVER--EKPKCIFLTSPNNPDGSI-INDEDLLK---ILEM-PILVVLDEAYTEFSGLESRM--EW  268 (422)
Q Consensus       205 -------~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~-~~~e~l~~---i~~~-~~~li~Deay~~~~~~~~~~--~~  268 (422)
                             -+++.+++.+.+  +++.+|++.......|.+ .|.+.+++   +|+. |+++|.||++..|...+...  ..
T Consensus       203 ~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~  282 (443)
T PRK08297        203 EVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQ  282 (443)
T ss_pred             hhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHh
Confidence                   023555666642  567888888666666765 34444444   4554 99999999999886543221  12


Q ss_pred             hhcCCcEEEEccChhhhccccccceeeecCHHHHHHHH-------HhcCCCCCcHHHHHHHHHHccC---ChHHH-HHHH
Q 014594          269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW-------RAKQPYNVSVAAEVAACAALQN---PIYLE-VKEA  337 (422)
Q Consensus       269 ~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~-------~~~~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~  337 (422)
                      .+..+.++   +|+|.++     +|.+++..++.+...       ....+|+.++++..++.+.|+-   ++..+ ..+.
T Consensus       283 ~gv~PDiv---~~gK~l~-----~~a~l~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~  354 (443)
T PRK08297        283 LGVRPDIV---AFGKKTQ-----VCGIMAGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEEDGLVENAARQ  354 (443)
T ss_pred             cCCCCCEE---Eeccccc-----ccceecchHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence            22233333   4689864     233444444322211       1224467888888888888762   33333 3333


Q ss_pred             HHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHH
Q 014594          338 LIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDA  413 (422)
Q Consensus       338 ~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~  413 (422)
                      -+..++.|.+..++.+.+. .....|.++.+++++......+.+.|.++||++.+..    .+.+||+.+   +.++.++
T Consensus       355 g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~~~----~~~lr~~P~l~~t~~eid~  430 (443)
T PRK08297        355 GEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPTTADRDEVIRRLWEEGVLVLPCG----ERSIRFRPALTVTTEEIDA  430 (443)
T ss_pred             HHHHHHHHHHHHHHCCCcceeeeccceEEEEEecCHHHHHHHHHHHHHCCEEEecCC----CCeEEEECCccCCHHHHHH
Confidence            3333333433333344332 2345678888888643335678888889999998754    367899755   3344444


Q ss_pred             HHHHHh
Q 014594          414 LMECLM  419 (422)
Q Consensus       414 l~~al~  419 (422)
                      +.++++
T Consensus       431 ~l~~l~  436 (443)
T PRK08297        431 AIDALR  436 (443)
T ss_pred             HHHHHH
Confidence            444443

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=99.50  E-value=3.7e-11  Score=123.11  Aligned_cols=285  Identities=11%  Similarity=0.105  Sum_probs=179.0

Q ss_pred             CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCC--
Q 014594          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF--  203 (422)
Q Consensus       127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~--  203 (422)
                      |..-..+.++..|+.||.+ ...+++||++.++.+++.+++.+||.|++...+|-+......+.|+++++++.. +.+  
T Consensus       193 ~~G~i~eAe~~AA~~fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi  271 (714)
T PRK15400        193 HSGPHKEAEEYIARVFNAD-RSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGI  271 (714)
T ss_pred             CChHHHHHHHHHHHHhCCC-cEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCC
Confidence            3334678899999999964 578999999999999999999999999999999988877888899999998733 222  


Q ss_pred             --CCC-----HHHHHHHhhc-CCCe---EEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCC-----ch
Q 014594          204 --SLN-----VELIADAVER-EKPK---CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLE-----SR  265 (422)
Q Consensus       204 --~~d-----~~~l~~~i~~-~~~~---~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~-----~~  265 (422)
                        +++     .+.+++.+.+ ++.+   .+++++| +-.|.+++.+++.+++.. +  +++||||..+. +.+     +.
T Consensus       272 ~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~sa  348 (714)
T PRK15400        272 LGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCG  348 (714)
T ss_pred             ccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCCcCh
Confidence              234     8999999864 2333   7888888 559999999999999976 5  78999998643 222     12


Q ss_pred             hhhh-hcCCcEEEEccChhhhcccccccee-eec----CHHHHHHHHHhcCCCCCcHH---HHHHHHHHccCChHHHHHH
Q 014594          266 MEWV-KKHDNLIVLRTFSKRAGLAGLRVGY-GAF----PLSIIEYLWRAKQPYNVSVA---AEVAACAALQNPIYLEVKE  336 (422)
Q Consensus       266 ~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~-i~~----~~~~~~~l~~~~~~~~~~~~---~~~aa~~~L~~~~~~~~~~  336 (422)
                      +... ...+.++++.|.+|.+  +|+.-+. +..    +.+-++......+..+++-+   +...+.+.++.....+..+
T Consensus       349 m~~ga~~~~~i~vtQStHKtL--~alTQaS~LHvkg~vd~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~~~~G~~l~~  426 (714)
T PRK15400        349 MSGGRVEGKVIYETQSTHKLL--AAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLIN  426 (714)
T ss_pred             hhcCCCCCCceEEEEchhhcc--cchhHHhHHHHcCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence            2111 1124468999999975  5554442 222    22222233233333334333   2333334444322222334


Q ss_pred             HHHHHHHHHHHHHccCCC------CcccC-C-----------------------------CceEEEEEeCC---------
Q 014594          337 ALIKERERLFKLLKDVPF------LNPYP-S-----------------------------YSNFILCEVTS---------  371 (422)
Q Consensus       337 ~~~~~~~~l~~~L~~~~~------~~~~p-~-----------------------------~~~f~~~~~~~---------  371 (422)
                      ...+....+++.|.+++.      +.+.. +                             +-.=+.+..|.         
T Consensus       427 ~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~  506 (714)
T PRK15400        427 GSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSD  506 (714)
T ss_pred             HHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEEEEeCCCCCCccccc
Confidence            444445555555544432      21111 1                             00013344432         


Q ss_pred             -CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEE--EEec-ChhhHHHHHHHHhhh
Q 014594          372 -GMDAKKLKDDLAKMGVMIRHYNNKELKGYVR--VSVG-KPEHTDALMECLMHL  421 (422)
Q Consensus       372 -~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iR--is~~-~~~~~~~l~~al~~l  421 (422)
                       |..+..+.+.|.++||.+--.+.    ..+=  ++++ +.++.++|.++|.++
T Consensus       507 ~Gipg~~v~~~L~e~gI~~E~~d~----~~iLfl~s~g~t~~~~~~L~~aL~~f  556 (714)
T PRK15400        507 FGIPASIVAKYLDEHGIVVEKTGP----YNLLFLFSIGIDKTKALSLLRALTDF  556 (714)
T ss_pred             cCCCHHHHHHHHHHcCCEEEecCC----CeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence             45677888999999999986652    3333  3343 345567788877654

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=99.49  E-value=7.9e-12  Score=124.09  Aligned_cols=316  Identities=13%  Similarity=0.137  Sum_probs=178.3

Q ss_pred             CCCCeEEcCCCC--CCC-CCCHHHH--HHHhc-CCCC----C---CCCCcchHHHHHHHHHHcC-CCCCCEEEeCCHHHH
Q 014594           93 KPEDIVKIDANE--NPY-GPPPEVR--EALGQ-LKFP----Y---IYPDPESRRLRAALAKDSG-LESDHILVGCGADEL  158 (422)
Q Consensus        93 ~~~~~i~l~~~~--~~~-~~~~~v~--~al~~-~~~~----~---~y~~~~~~~lr~~la~~~~-~~~~~i~~~~G~~~a  158 (422)
                      +++.+||+..+.  ..+ ..+|.+.  +++.+ +...    .   .+......++-+.|++... -..+.+++++++++|
T Consensus        36 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEA  115 (431)
T TIGR03251        36 DGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGDPALPHLFFIEGGALA  115 (431)
T ss_pred             CCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHH
Confidence            677888887763  223 3467887  67655 2211    1   1222223455555666542 234689999999999


Q ss_pred             HHHHHHHhcC--------C------CCEEEEcCCCchhHHHHHHH-cCCE-EE----------E--ec-----CC-CCCC
Q 014594          159 IDLIMRCVLD--------P------GDKIVDCPPTFTMYEFDAAV-NGAA-VV----------K--VP-----RK-SDFS  204 (422)
Q Consensus       159 l~~~~~~l~~--------~------gd~Vl~~~p~y~~~~~~~~~-~g~~-~~----------~--v~-----~~-~~~~  204 (422)
                      ++.+++.-..        .      +.+|+....+|++....+.. .|.. ..          .  .|     .+ +...
T Consensus       116 ve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  195 (431)
T TIGR03251       116 VENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLD  195 (431)
T ss_pred             HHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccc
Confidence            9999995420        1      36799999999765544332 2211 00          0  11     00 0000


Q ss_pred             -------CCHHHHHHHhh--cCCCeEEEEeCCCCccCcCC-CHHHH---HHHHcC-CCeEEEccCCccccCCCchh--hh
Q 014594          205 -------LNVELIADAVE--REKPKCIFLTSPNNPDGSII-NDEDL---LKILEM-PILVVLDEAYTEFSGLESRM--EW  268 (422)
Q Consensus       205 -------~d~~~l~~~i~--~~~~~~i~l~~p~NPtG~~~-~~e~l---~~i~~~-~~~li~Deay~~~~~~~~~~--~~  268 (422)
                             -+++.+++.+.  .+++.++++.......|.+. +.+.+   .++|+. |+++|+||++..|...+...  ..
T Consensus       196 ~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~  275 (431)
T TIGR03251       196 QVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQ  275 (431)
T ss_pred             hhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHh
Confidence                   12445555553  25788999887777778765 44444   445554 99999999999876543221  12


Q ss_pred             hhcCCcEEEEccChhhhccccccceeeecCH--HHHHHHH----HhcCCCCCcHHHHHHHHHHccC---ChHHH-HHHHH
Q 014594          269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL--SIIEYLW----RAKQPYNVSVAAEVAACAALQN---PIYLE-VKEAL  338 (422)
Q Consensus       269 ~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~--~~~~~l~----~~~~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~  338 (422)
                      .+-.++++   +++|.+  +.  .|++....  ++.....    .....|+.++++.+++.+.|+.   .+..+ ..+.-
T Consensus       276 ~gv~PDi~---~~gK~~--~~--~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g  348 (431)
T TIGR03251       276 LGVQPDIV---AFGKKT--QV--CGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEERLVDNARVQG  348 (431)
T ss_pred             cCCCCCEE---EecccC--cc--ceEEecchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            22233333   368875  22  35554432  2222111    1223467788888888887763   23333 44444


Q ss_pred             HHHHHHHHHHHccCC-CCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHHHH
Q 014594          339 IKERERLFKLLKDVP-FLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTDAL  414 (422)
Q Consensus       339 ~~~~~~l~~~L~~~~-~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~~l  414 (422)
                      +..++.|.+..++.+ .+.-....|.++.+++++......+.+.|.++||.+.+..    .+.+||++..   .++++++
T Consensus       349 ~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~~g----~~~lr~~P~l~~t~~eid~~  424 (431)
T TIGR03251       349 AHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTADRDEVIRQLYREGVLLLGCG----ERSIRFRPPLTVTREEIDAA  424 (431)
T ss_pred             HHHHHHHHHHHHhCccceecccccceeEEEEeCCHHHHHHHHHHHHhCCeEEecCC----CCeEEEECCccCCHHHHHHH
Confidence            444444444333344 3222345577888888643345578888999999997754    3679998763   3444555


Q ss_pred             HHHHh
Q 014594          415 MECLM  419 (422)
Q Consensus       415 ~~al~  419 (422)
                      .++++
T Consensus       425 l~~l~  429 (431)
T TIGR03251       425 IDAIR  429 (431)
T ss_pred             HHHHH
Confidence            54444

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>PLN02590 probable tyrosine decarboxylase

Probab=99.48  E-value=1.8e-11  Score=123.12  Aligned_cols=287  Identities=13%  Similarity=0.094  Sum_probs=176.5

Q ss_pred             HHHHHHHHHcCCCC-------CCEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEcCCCchhHHHHHHHcCC--
Q 014594          133 RLRAALAKDSGLES-------DHILVGCGADELIDLIMRCVLD-----------PGDKIVDCPPTFTMYEFDAAVNGA--  192 (422)
Q Consensus       133 ~lr~~la~~~~~~~-------~~i~~~~G~~~al~~~~~~l~~-----------~gd~Vl~~~p~y~~~~~~~~~~g~--  192 (422)
                      .+.+++++++|.+.       ..-++++|+++++-.++.+-.+           +.-.|++++.+|......+...|.  
T Consensus       174 ~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~  253 (539)
T PLN02590        174 IVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHE  253 (539)
T ss_pred             HHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCc
Confidence            45556666678764       2357788999887665543211           112455678889999999999888  


Q ss_pred             -EEEEecCC--CCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCC-
Q 014594          193 -AVVKVPRK--SDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-  262 (422)
Q Consensus       193 -~~~~v~~~--~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~-  262 (422)
                       +++.||.+  .++.+|++.|+++|.+.     .|-+|+.+-....||.+-|.++|.+||+. |+|+.+|.+|..+..- 
T Consensus       254 ~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~  333 (539)
T PLN02590        254 ENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACIC  333 (539)
T ss_pred             ccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcC
Confidence             57888865  46789999999999642     24456666778899999999999999997 9999999999976521 


Q ss_pred             Cchhhhhhc-CCcEEEEccChhhhccccccceeeecCH--HHHHHHHH------hcC----------CCC--Cc----HH
Q 014594          263 ESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL--SIIEYLWR------AKQ----------PYN--VS----VA  317 (422)
Q Consensus       263 ~~~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~--~~~~~l~~------~~~----------~~~--~~----~~  317 (422)
                      +.....+.. ....=+...++|. +.....+|.++++.  .+.+.+..      ...          .|+  .+    .+
T Consensus       334 ~~~r~~~~Gie~ADSit~D~HK~-l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raL  412 (539)
T PLN02590        334 PEYRKFIDGIENADSFNMNAHKW-LFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSL  412 (539)
T ss_pred             hhhHHHhcCCccCCEEEECchhh-cCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHH
Confidence            111111111 1122345578995 44677888888753  22222210      000          011  11    12


Q ss_pred             HHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC-CCC-------HHHHHHHHHhCCcE
Q 014594          318 AEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMD-------AKKLKDDLAKMGVM  388 (422)
Q Consensus       318 ~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~-~~~-------~~~~~~~L~~~gI~  388 (422)
                      -..++...+....+.++.++..+..+++.+.|++.+.+.+ .+..-+.+.+++.+ +.+       ..++.+.|.+.|..
T Consensus       413 klW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~  492 (539)
T PLN02590        413 KLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKI  492 (539)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCE
Confidence            2233333333334444778888999999999998875553 44455556666542 222       13566666666765


Q ss_pred             EEeCCCCCCCCeEEEEecCh-hhHHHHHHHHhh
Q 014594          389 IRHYNNKELKGYVRVSVGKP-EHTDALMECLMH  420 (422)
Q Consensus       389 v~~~~~~~~~~~iRis~~~~-~~~~~l~~al~~  420 (422)
                      ......-.+.-++|++++.+ .+.+++..+++.
T Consensus       493 ~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~  525 (539)
T PLN02590        493 FISHTALSGKFVLRFAVGAPLTEEKHVTEAWQI  525 (539)
T ss_pred             EEEeeEECCEEEEEEEecCCCCCHHHHHHHHHH
Confidence            55443323346999998632 223444444443

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.48  E-value=2.7e-11  Score=129.28  Aligned_cols=296  Identities=15%  Similarity=0.101  Sum_probs=191.5

Q ss_pred             cCCCCCCCCCCHHHHHHHhc-CCCCCCC-CC-----cc----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-c
Q 014594          100 IDANENPYGPPPEVREALGQ-LKFPYIY-PD-----PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-L  167 (422)
Q Consensus       100 l~~~~~~~~~~~~v~~al~~-~~~~~~y-~~-----~~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~  167 (422)
                      ++.|.-+.-.|+.+.+.+.+ -..-..| |.     .|    ..++++.++++.|.+..++-+..+++.+.+.++.++ .
T Consensus        81 ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~  160 (954)
T PRK05367         81 IGQGYYGTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRV  160 (954)
T ss_pred             cCCCCCCCcCcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhh
Confidence            44454444455656555544 2211233 32     12    237889999999999999999999999999888876 3


Q ss_pred             CCC--CEEEEcCCCchhHHH----HHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594          168 DPG--DKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (422)
Q Consensus       168 ~~g--d~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~  241 (422)
                      .++  |+|++++..|+....    .++..|++++.++.+.+  ++        . .++.++++.+| |-+|.+.+.+++.
T Consensus       161 ~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d--~~--------~-~~~~~vlvq~p-~~~G~i~d~~~i~  228 (954)
T PRK05367        161 SKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA--LD--------H-DDVFGVLLQYP-GTSGEVRDYTALI  228 (954)
T ss_pred             ccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC--CC--------c-ccEEEEEEecC-CCCeeeccHHHHH
Confidence            443  899999999986554    34668999999986432  11        1 34555655566 5599999999999


Q ss_pred             HHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhh-----hccccccceeeecCHHHHHHHHHhc------
Q 014594          242 KILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR-----AGLAGLRVGYGAFPLSIIEYLWRAK------  309 (422)
Q Consensus       242 ~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~-----~~~~G~r~G~i~~~~~~~~~l~~~~------  309 (422)
                      ++++. |+++++|.....+....    .....+-++++++..|.     ||.|  ..|++.+++++.+.+.-..      
T Consensus       229 ~~ah~~Gal~~vda~~~Al~~l~----~pge~GaDi~vgs~qkfg~P~g~GGP--~aGflavr~~~~r~lpgrivG~s~d  302 (954)
T PRK05367        229 AAAHARGALVAVAADLLALTLLT----PPGEMGADIAVGSAQRFGVPMGFGGP--HAAYFAVRDAYKRSMPGRIVGVSVD  302 (954)
T ss_pred             HHHHHcCCEEEEEehhhhccCCC----ChhhcCCCEEEeeCcccCCCCCCCCC--CEEEEEECHHHHhhCCCCeeeeecc
Confidence            99987 99999997553332211    13355667999999984     4434  4899999988877653100      


Q ss_pred             ----C----------------CCCCcHH---HHHHHHH----HccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC
Q 014594          310 ----Q----------------PYNVSVA---AEVAACA----ALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY  361 (422)
Q Consensus       310 ----~----------------~~~~~~~---~~~aa~~----~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~  361 (422)
                          .                ..+.|..   +..++.+    .+..+..++ +.++...+..++.+.|+..++....+..
T Consensus       303 ~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~~  382 (954)
T PRK05367        303 AAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHDSF  382 (954)
T ss_pred             cCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCCCC
Confidence                0                0011111   1111111    112234455 7888899999999999876533222221


Q ss_pred             ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          362 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       362 ~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      ..-+.++++  .++.++.++|+++||.++...    ++.+|||+.   +.++++.|.+++.
T Consensus       383 f~~~~~~~~--~~~~~i~~~l~~~gi~~~~~~----~~~l~is~~e~~t~~did~l~~~l~  437 (954)
T PRK05367        383 FDTLTVEVG--GDAAAVLARALAAGINLRRVD----DDHVGISLDETTTREDLAALLAVFG  437 (954)
T ss_pred             CCeEEEeCC--CCHHHHHHHHHHCCceecccc----CCEEEEEecccCCHHHHHHHHHHHc
Confidence            122345553  478999999999999996543    468999986   4556666666664

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=99.45  E-value=1.6e-11  Score=121.86  Aligned_cols=309  Identities=14%  Similarity=0.105  Sum_probs=170.6

Q ss_pred             CCCCCCeEEcCCCC--CCC-CCCHHHHHHHhc-CCCCCCCCCc--chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFPYIYPDP--ESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~-~~~~~v~~al~~-~~~~~~y~~~--~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~  164 (422)
                      +.+++.+||+..+.  ..+ ..+|++.+++.+ +.....+..+  ...++.+.|++.+.. .+.+++++++++|++.+++
T Consensus        44 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~la~~l~~~~p~-~~~v~f~~sGseA~e~Alk  122 (431)
T PRK06209         44 DVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCNFTRPSAIELDAAESFLELIDG-ADMVKFCKNGSDATSAAVR  122 (431)
T ss_pred             eCCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHhCCc-cceEEEecCHHHHHHHHHH
Confidence            45678899998774  233 357889888876 3322233222  233678888887742 3689999999999999999


Q ss_pred             Hhc-CCC-CEEEEc-CCCchhHHHHHHHcCCEEE---------EecCCCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCc
Q 014594          165 CVL-DPG-DKIVDC-PPTFTMYEFDAAVNGAAVV---------KVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNP  230 (422)
Q Consensus       165 ~l~-~~g-d~Vl~~-~p~y~~~~~~~~~~g~~~~---------~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NP  230 (422)
                      .-. -.| .+|+.. .-.|+.+....  .|....         .... .-..-|++.+++.+.+  .++.+|++....  
T Consensus       123 lAr~~tgr~~i~~~~~~~~h~~~~~~--~g~~~~~~~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~aavi~Epv~--  197 (431)
T PRK06209        123 LARAYTGRDLVARCADHPFFSTDDWF--IGTTPMSAGIPASVSALTV-TFRYNDIASLEALFEDHPGRIACVILEPAT--  197 (431)
T ss_pred             HHHHHhCCCeEEEeccCccccccccc--cccCCCCCCCChhHhcccc-ccCCCCHHHHHHHHHhCCCCEEEEEEcccc--
Confidence            432 133 445554 23333211110  111100         0000 0012378999988853  346677765432  


Q ss_pred             cCcCCC---HHHHHHHHcC-CCeEEEccCCccccCCCchhh-hhhcCCcEEEEccChhhhccccccceeeecCHHHHHH-
Q 014594          231 DGSIIN---DEDLLKILEM-PILVVLDEAYTEFSGLESRME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY-  304 (422)
Q Consensus       231 tG~~~~---~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~-  304 (422)
                       |...+   .+++.++|+. |+++|+||++..|........ ..+..+.   +.+++|.+| .|+.+|++++++++++. 
T Consensus       198 -g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~~~gv~PD---i~t~gK~lg-gG~p~~av~~~~~i~~~~  272 (431)
T PRK06209        198 -ADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQKLYGIVPD---LSCFGKALG-NGFAVSALAGKREYMELG  272 (431)
T ss_pred             -CCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhHHhCCCcc---eeeehhhhc-CCcccEEEEEHHHHHhhh
Confidence             33444   4566666766 999999999987653221111 1222222   356799998 68899999999998876 


Q ss_pred             -HHH--------hcCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEe--
Q 014594          305 -LWR--------AKQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEV--  369 (422)
Q Consensus       305 -l~~--------~~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~--  369 (422)
                       +..        ...+++.+++..+++.+.|+   +++..+ ..+.....++.|.+...+++........|..+.+.+  
T Consensus       273 ~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~  352 (431)
T PRK06209        273 GLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYST  352 (431)
T ss_pred             cccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEec
Confidence             311        12235667777777777664   333333 434444444444443344553321222232222221  


Q ss_pred             -C-CCCC----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014594          370 -T-SGMD----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM  419 (422)
Q Consensus       370 -~-~~~~----~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~  419 (422)
                       . .+.+    ...+.+.|.++||.+.+         ++|+.. +.++++++.++++
T Consensus       353 ~~~~~~~~~~~~~~~~~~l~~~Gi~~p~---------l~is~~ht~~dId~~l~~l~  400 (431)
T PRK06209        353 LDGNGQPSQAFRTLFLQETIRRGVLMPS---------LVVSYAHGDADIERTIDAVH  400 (431)
T ss_pred             CCcccCCcHHHHHHHHHHHHHCCccccc---------ccccccCCHHHHHHHHHHHH
Confidence             1 1111    12566778899997622         455533 3455555555554

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.44  E-value=6.1e-11  Score=124.54  Aligned_cols=315  Identities=14%  Similarity=0.179  Sum_probs=189.8

Q ss_pred             CeEEcCCC--CCCCC--CCHHHHHHHhc-CC-CCCC----CCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHHHH
Q 014594           96 DIVKIDAN--ENPYG--PPPEVREALGQ-LK-FPYI----YPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMR  164 (422)
Q Consensus        96 ~~i~l~~~--~~~~~--~~~~v~~al~~-~~-~~~~----y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~~~~~  164 (422)
                      .++|+..+  ...++  ..|++.+|+.+ +. ..+.    +..+...+|-++|.+..+-+ .+.|+++++|++|++.+++
T Consensus       366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlK  445 (817)
T PLN02974        366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALK  445 (817)
T ss_pred             eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHH
Confidence            57777665  23333  47999988876 32 2121    22223456667776643311 3589999999999999988


Q ss_pred             HhcC---------------------CCCEEEEcCCCchhHHHHHHHcCC----------E-----EEEecCC--------
Q 014594          165 CVLD---------------------PGDKIVDCPPTFTMYEFDAAVNGA----------A-----VVKVPRK--------  200 (422)
Q Consensus       165 ~l~~---------------------~gd~Vl~~~p~y~~~~~~~~~~g~----------~-----~~~v~~~--------  200 (422)
                      .-.+                     ...+|+....+|++-...+...+.          .     ...++..        
T Consensus       446 mA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~  525 (817)
T PLN02974        446 MAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGR  525 (817)
T ss_pred             HHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCcccccccc
Confidence            4311                     124699999999744333222111          0     0011100        


Q ss_pred             ------CC-----------CC-----CC------------HHHHHHHhhc-------CCCeEEEEeCC-CCccCcCCC-H
Q 014594          201 ------SD-----------FS-----LN------------VELIADAVER-------EKPKCIFLTSP-NNPDGSIIN-D  237 (422)
Q Consensus       201 ------~~-----------~~-----~d------------~~~l~~~i~~-------~~~~~i~l~~p-~NPtG~~~~-~  237 (422)
                            .+           |.     +|            .+.+++.+.+       .++.+|++... +.-.|.+.+ .
T Consensus       526 ~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~  605 (817)
T PLN02974        526 WNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDP  605 (817)
T ss_pred             ccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCH
Confidence                  00           00     00            2456666642       45778888763 676788775 3


Q ss_pred             H---HHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChhhhcccc-ccceeeecCHHHHHHHHH---
Q 014594          238 E---DLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---  307 (422)
Q Consensus       238 e---~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~---  307 (422)
                      +   .++++|+. |+++|.||++..|...+...  ...+-.++++   +++|.++ .| +.+|.+++++++.+.+..   
T Consensus       606 ~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi---~~gKgLt-gG~~Plaa~l~~~~I~~~f~~~~~  681 (817)
T PLN02974        606 LFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIA---CYAKLLT-GGLVPLAATLATEEVFEAFRGPSK  681 (817)
T ss_pred             HHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEE---eeccccc-CCCCccEEEEEcHHHHHhhccccc
Confidence            3   34455555 99999999999987544322  2222233334   4679987 78 699999999999988752   


Q ss_pred             -----hcCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHH----HHHccCCCCcccCCCceEEEEEeCCCC-
Q 014594          308 -----AKQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLF----KLLKDVPFLNPYPSYSNFILCEVTSGM-  373 (422)
Q Consensus       308 -----~~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~----~~L~~~~~~~~~p~~~~f~~~~~~~~~-  373 (422)
                           ...+|+.++++.+++.+.|+   +++..+ +.+...+..+++.    +.|.+++.+.-....|.++.+++.+.. 
T Consensus       682 ~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~  761 (817)
T PLN02974        682 LDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGS  761 (817)
T ss_pred             cCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCc
Confidence                 22357889999988887775   333333 3344444444443    344555654444567778888875311 


Q ss_pred             -------CHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          374 -------DAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       374 -------~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                             -+..+.+.+. ++||.+++..     +.||+...   .+++.+++..++.
T Consensus       762 ~~~~~~~~a~~v~~~~~~~~Gl~~r~~G-----nvi~l~pP~~i~~e~l~~~~~~l~  813 (817)
T PLN02974        762 GSGYSSLYARSVVRRLRREDGIYARPLG-----NVVYLMCGPTTSPETCTRLLRKVY  813 (817)
T ss_pred             ccccchHHHHHHHHHHHHhCCEEEEecC-----CEEEEeCCCCCCHHHHHHHHHHHH
Confidence                   1346778888 9999999853     68888643   4555566655554

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.42  E-value=9.7e-11  Score=124.61  Aligned_cols=297  Identities=15%  Similarity=0.142  Sum_probs=189.5

Q ss_pred             CCCCCCCCCHHHHHHHhc-CCCC---CCC-CC--cc----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCC
Q 014594          102 ANENPYGPPPEVREALGQ-LKFP---YIY-PD--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDP  169 (422)
Q Consensus       102 ~~~~~~~~~~~v~~al~~-~~~~---~~y-~~--~~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~  169 (422)
                      .|.-+.-.|+.+.+++.+ ...-   ..| |+  .|    ..+++..++++.|.+++++.++.+++.+.+.++.++ .++
T Consensus       110 ~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~  189 (993)
T PLN02414        110 MGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILK  189 (993)
T ss_pred             CCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhccc
Confidence            333334456777677765 2211   334 22  12    347899999999999999999999999999888766 454


Q ss_pred             C--CEEEEcCCCchhHHH----HHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594          170 G--DKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (422)
Q Consensus       170 g--d~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i  243 (422)
                      |  |+|++++..|+.+..    .++..|++++.++.+.   .+      ... ..+-.+++..|+ .+|.+.+.+++.++
T Consensus       190 g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~---~~------~~~-~~v~~vlvq~P~-~~G~v~dv~~I~~~  258 (993)
T PLN02414        190 GKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKD---FD------YSS-GDVCGVLVQYPA-TDGEVLDYAEFVKN  258 (993)
T ss_pred             CCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchh---hc------ccc-CceEEEEEecCC-CCeEEcCHHHHHHH
Confidence            4  789999999986544    3455799999988532   11      111 233344444554 49999999999999


Q ss_pred             HcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhh---ccccccceeeecCHHHHHHHHH-h-c--------
Q 014594          244 LEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA---GLAGLRVGYGAFPLSIIEYLWR-A-K--------  309 (422)
Q Consensus       244 ~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~---~~~G~r~G~i~~~~~~~~~l~~-~-~--------  309 (422)
                      ++. |+++++ .++..-.   ..+......+.++++++..|..   |..|-+.|++.+++++.+.+.- . .        
T Consensus       259 ah~~GaL~iV-aad~lal---~~l~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~PgriVG~s~d~~g~  334 (993)
T PLN02414        259 AHANGVKVVM-ATDLLAL---TMLKPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSGK  334 (993)
T ss_pred             HHHcCCEEEE-EECHHHh---cCCCCHhhccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhCCCcccCcccCCCCC
Confidence            987 899888 4433211   1111133456678899988843   1234458999998887664420 0 0        


Q ss_pred             C----------------CCCCcHHHHHHHHHHc-------cCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEE
Q 014594          310 Q----------------PYNVSVAAEVAACAAL-------QNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFI  365 (422)
Q Consensus       310 ~----------------~~~~~~~~~~aa~~~L-------~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~  365 (422)
                      .                ..+.|.....++.+.+       ..+..++ +.+++.++..++.+.|++.|+....+....-+
T Consensus       335 ~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~~~~f~~v  414 (993)
T PLN02414        335 PALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQVQSLPFFDTV  414 (993)
T ss_pred             cccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCccCCCCCcCeE
Confidence            0                0122221222222222       1223344 77889999999999998876332233222234


Q ss_pred             EEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          366 LCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       366 ~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      .++++   +..++.++|.++||.++...    .+.+|+|+.   +.+|+|.|.+++..
T Consensus       415 t~~~~---~~~~v~~~L~~~gI~l~~~~----~~~lrvs~~e~~T~edId~L~~~l~~  465 (993)
T PLN02414        415 KVKCS---DADAIADAAAKVGINLRVVD----ANTVTVSFDETTTLEDVDKLFKVFAG  465 (993)
T ss_pred             EEecC---CHHHHHHHHHHCCCeeEEec----CCeEEEEeeccCCHHHHHHHHHHHcc
Confidence            45554   56889999999999888654    467999975   56778888888754

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=99.42  E-value=8.8e-11  Score=118.27  Aligned_cols=270  Identities=12%  Similarity=0.082  Sum_probs=170.0

Q ss_pred             EEEeCCHHHHHHHHHHHh----cC----------------------CCCEEEEcCCCchhHHHHHHHcCC---EEEEecC
Q 014594          149 ILVGCGADELIDLIMRCV----LD----------------------PGDKIVDCPPTFTMYEFDAAVNGA---AVVKVPR  199 (422)
Q Consensus       149 i~~~~G~~~al~~~~~~l----~~----------------------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~  199 (422)
                      -++|+|+++++-.++.+-    +.                      ++..|+++.-.|......++..|.   +++.+|.
T Consensus       162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~  241 (522)
T TIGR03799       162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKT  241 (522)
T ss_pred             eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEe
Confidence            577889998887765532    11                      124688888899999888888888   7899998


Q ss_pred             CCCCCCCHHHHHHHhhc---CCCeEEEEe--CCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCC-Cchhhhhhc-
Q 014594          200 KSDFSLNVELIADAVER---EKPKCIFLT--SPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-ESRMEWVKK-  271 (422)
Q Consensus       200 ~~~~~~d~~~l~~~i~~---~~~~~i~l~--~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~-~~~~~~~~~-  271 (422)
                      ++++.+|+++|++.+.+   .+++.++++  ..++.||.+-|.+++.++++. |+++++|.+|...... +.....+.. 
T Consensus       242 d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gl  321 (522)
T TIGR03799       242 DANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGI  321 (522)
T ss_pred             CCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCc
Confidence            88889999999998853   455656555  557799999999999999997 9999999999854311 111111111 


Q ss_pred             CCcEEEEccChhhhccccccceeeecC-HHHHHHHHHh----cC-------C--C--CCcH--HHHHHHHHHccCChHHH
Q 014594          272 HDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRA----KQ-------P--Y--NVSV--AAEVAACAALQNPIYLE  333 (422)
Q Consensus       272 ~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~----~~-------~--~--~~~~--~~~~aa~~~L~~~~~~~  333 (422)
                      .....+..+.+|.++ ....+|.++.+ ++..+.+...    ..       .  +  +-+.  +...++...+....+.+
T Consensus       322 e~aDSit~d~HK~l~-~P~g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~  400 (522)
T TIGR03799       322 ERADSVTIDAHKQLY-VPMGAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYEL  400 (522)
T ss_pred             hhCCEEEEChhhcCC-cCcccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhHHHHHH
Confidence            233467778999443 34558888875 4555544321    00       0  1  1111  22334444444444434


Q ss_pred             HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEe-CCCC---------------C--H----HHHHHHHHhCCcEEE
Q 014594          334 VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEV-TSGM---------------D--A----KKLKDDLAKMGVMIR  390 (422)
Q Consensus       334 ~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~-~~~~---------------~--~----~~~~~~L~~~gI~v~  390 (422)
                      +.++..+..+++.+.|++.+.+.+ .+..-+.+.+++ |.+.               +  .    ..+.+.+.+.|....
T Consensus       401 ii~~~~~la~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~v  480 (522)
T TIGR03799       401 LIDQSIEKAKYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFV  480 (522)
T ss_pred             HHHHHHHHHHHHHHHHhhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEE
Confidence            888889999999999998866654 344444555554 3211               0  1    245556666776554


Q ss_pred             eCCC-----C-C-CCCeEEEEecCh-hhHHHHHHHHh
Q 014594          391 HYNN-----K-E-LKGYVRVSVGKP-EHTDALMECLM  419 (422)
Q Consensus       391 ~~~~-----~-~-~~~~iRis~~~~-~~~~~l~~al~  419 (422)
                      ....     . + ..-.+|++++.+ .+.+.+...++
T Consensus       481 s~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~  517 (522)
T TIGR03799       481 SRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILD  517 (522)
T ss_pred             EEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHH
Confidence            3221     1 1 124799998643 23355555554

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=99.41  E-value=3.4e-10  Score=111.73  Aligned_cols=286  Identities=19%  Similarity=0.198  Sum_probs=186.9

Q ss_pred             CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CC--
Q 014594          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SD--  202 (422)
Q Consensus       127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~--  202 (422)
                      |..-..+..+..|+.+|.+ ...+++||++.++..++.+++.+||.|+++.++|-+........|+.++++...  ..  
T Consensus        68 p~G~i~eAqe~aA~~fgAd-~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~g  146 (557)
T COG1982          68 PEGPIKEAQELAARVFGAD-HTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYG  146 (557)
T ss_pred             CCccHHHHHHHHHHHhCCC-ceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCcccc
Confidence            4444678999999999964 478899999999999999999999999999999988887778899999998732  21  


Q ss_pred             --CCCCHHHHHHHhhc-CCC-eEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCch-hhhhhcCCcEE
Q 014594          203 --FSLNVELIADAVER-EKP-KCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLI  276 (422)
Q Consensus       203 --~~~d~~~l~~~i~~-~~~-~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~-~~~~~~~~~~i  276 (422)
                        .+++.+.+.+++.+ +.. |+++++||.- .|.+++.+++.+.+.. ++|+.+||++......... .......+.++
T Consensus       147 i~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~  225 (557)
T COG1982         147 IIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADF  225 (557)
T ss_pred             ccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCceE
Confidence              36899999997753 344 7888888876 8999999999999876 9999999998754322211 11222367789


Q ss_pred             EEccChhhhccccccce-eeecCH-------HHHHHHHHhcCCCCCcHHH---HHHHHHHccCC---hHHHHHHHHHHHH
Q 014594          277 VLRTFSKRAGLAGLRVG-YGAFPL-------SIIEYLWRAKQPYNVSVAA---EVAACAALQNP---IYLEVKEALIKER  342 (422)
Q Consensus       277 ~~~S~SK~~~~~G~r~G-~i~~~~-------~~~~~l~~~~~~~~~~~~~---~~aa~~~L~~~---~~~~~~~~~~~~~  342 (422)
                      ++.|.+|..  +++.-+ ++..+.       .+-+.+. ..+..+++-..   ..+|...+...   .|.+..+..-+.|
T Consensus       226 ~tqS~HK~l--~alSQaS~iHv~~~~~~~~~r~nea~~-~h~STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r  302 (557)
T COG1982         226 VTQSTHKLL--AALSQASMIHVKDGRAVNHERFNEALM-MHQSTSPSYPLMASLDVARMQEGNAGRELWQEVIDEAIDFR  302 (557)
T ss_pred             EEechhhhh--hhhhhhHHHhhCCCccCCHHHHHHHHH-HHccCCchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHH
Confidence            999999975  455544 344432       2223332 22223333222   22222222221   1222355556667


Q ss_pred             HHHHHHHccCCCCccc-CCC-----c----------eE------EEEEeC-CCCCHHHHHHHHHhCCcEEEeCCCCCCCC
Q 014594          343 ERLFKLLKDVPFLNPY-PSY-----S----------NF------ILCEVT-SGMDAKKLKDDLAKMGVMIRHYNNKELKG  399 (422)
Q Consensus       343 ~~l~~~L~~~~~~~~~-p~~-----~----------~f------~~~~~~-~~~~~~~~~~~L~~~gI~v~~~~~~~~~~  399 (422)
                      +.+++...+++|+.+. |+.     +          .|      +.+..| .|..+-.+..+|+++||...-.+..  ..
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L~e~gii~e~~~d~--~~  380 (557)
T COG1982         303 KALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYLREHGIIPEETGDY--SN  380 (557)
T ss_pred             HHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHHHHHcCCeeeecCCc--ee
Confidence            7777777776655432 221     1          11      234443 3788999999999999888765521  12


Q ss_pred             eEEEEec---ChhhHHHHHHHHh
Q 014594          400 YVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       400 ~iRis~~---~~~~~~~l~~al~  419 (422)
                      .+=++.+   .....+.|.++.+
T Consensus       381 lll~~~~~gk~~~lv~~L~~f~r  403 (557)
T COG1982         381 LLLFSPGIGKWQTLVDRLLEFKR  403 (557)
T ss_pred             eEEeeeccchHHHHHHHHHHHHH
Confidence            2233333   2344566666665

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=99.41  E-value=2.3e-11  Score=112.52  Aligned_cols=191  Identities=21%  Similarity=0.276  Sum_probs=126.6

Q ss_pred             HHHHHHHhcC-------C--CCCCCCCcchHHHHHHHHHHcCCCCCCEEEe---CCHHHHHHHHHHHhcCCCCEEEEcC-
Q 014594          111 PEVREALGQL-------K--FPYIYPDPESRRLRAALAKDSGLESDHILVG---CGADELIDLIMRCVLDPGDKIVDCP-  177 (422)
Q Consensus       111 ~~v~~al~~~-------~--~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~---~G~~~al~~~~~~l~~~gd~Vl~~~-  177 (422)
                      ..|++|+++.       .  .+++|.|.|-+.|.+..|+.|+.+  .-++=   .++|+||..++..+++|||+++... 
T Consensus        27 ~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vfgaE--~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG  104 (403)
T PF06838_consen   27 LKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVFGAE--DALVRPQFVSGTHAIALALFGVLRPGDELLSITG  104 (403)
T ss_dssp             HHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHCT-S--EEEEETTS-SHHHHHHHHHHHH--TT-EEEESSS
T ss_pred             HHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHhCch--hhhhcccccchHHHHHHHHHhcCCCCCeEEEcCC
Confidence            3466666542       1  235667778889999999999953  33332   3789999999999999999988543 


Q ss_pred             CCchhHHHHH----------HHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEe-CCCCccCcCCCHHHHHHHHcC
Q 014594          178 PTFTMYEFDA----------AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILEM  246 (422)
Q Consensus       178 p~y~~~~~~~----------~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~e~l~~i~~~  246 (422)
                      .-|.......          +-+|++...+++.++..+|++.++++++ +++|++++. +---.+=..++.++|+++++.
T Consensus       105 ~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~-~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~  183 (403)
T PF06838_consen  105 KPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDGTIDWEAIKKALK-PNTKMVLIQRSRGYSWRPSLTIEEIKEIIKF  183 (403)
T ss_dssp             S--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTSSB-HHHHHHHHH-TTEEEEEEE-S-TTSSS----HHHHHHHHHH
T ss_pred             CchhhHHHHhCCCCCCCCChHHhCceeEEEeecCCCCcCHHHHHHhhc-cCceEEEEecCCCCCCCCCCCHHHHHHHHHH
Confidence            3444333332          3468899999988888999999999998 899999988 655555566788999998874


Q ss_pred             ------CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccc--cceeeecCHHHHHHHHHhc
Q 014594          247 ------PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGL--RVGYGAFPLSIIEYLWRAK  309 (422)
Q Consensus       247 ------~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~--r~G~i~~~~~~~~~l~~~~  309 (422)
                            ++++++|.+|.+|+....+.    ..+.+++.+|+=|..| .|+  -.||++++.+++++.....
T Consensus       184 vk~~~p~~iifVDNCYGEFvE~~EP~----~vGADl~aGSLIKNpG-GgiAptGGYIaGr~~lVe~~a~RL  249 (403)
T PF06838_consen  184 VKEINPDVIIFVDNCYGEFVETQEPT----EVGADLMAGSLIKNPG-GGIAPTGGYIAGRKDLVERAAYRL  249 (403)
T ss_dssp             HHHH-TTSEEEEE-TTTTTTSSS-GG----GGT-SEEEEETTSGGG-TTT-SS-EEEEESHHHHHHHHHHH
T ss_pred             HHhhCCCeEEEEeCCcceeccccCcc----ccchhheeccceeCCC-CCccCcCCEEechHHHHHHHHhhh
Confidence                  89999999999998533222    2233499999999876 443  2689999999999886543

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.36  E-value=4.9e-11  Score=108.09  Aligned_cols=317  Identities=15%  Similarity=0.124  Sum_probs=210.8

Q ss_pred             hCCCCCCeEEcCCC---CCCCCCCHHHHHHHhcC-CCC---C--CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594           90 LGRKPEDIVKIDAN---ENPYGPPPEVREALGQL-KFP---Y--IYPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (422)
Q Consensus        90 ~~~~~~~~i~l~~~---~~~~~~~~~v~~al~~~-~~~---~--~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~  160 (422)
                      |+.++.+.+||=.+   .|.-..+|.+.+++.+. +..   .  .|. .-..++.+-+.++++.  +.++.++.+.|+.+
T Consensus        54 wD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlssrafYn-d~~~~f~~~vt~lf~~--~kvlpmnTGaEa~E  130 (427)
T KOG1402|consen   54 WDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSSRAFYN-DVLGEFAEYVTKLFGY--DKVLPMNTGAEAVE  130 (427)
T ss_pred             ECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhhHHHhh-hhHHHHHHHHHHhcCc--ceeeecccchhHHH
Confidence            45566777777554   35556789999999862 211   1  121 2245778888888885  57888999999999


Q ss_pred             HHHHHhc------C--CCC--EEEEcCCCchhHHHHHHHcCCE--------------EEEecCCCCCCCCHHHHHHHhhc
Q 014594          161 LIMRCVL------D--PGD--KIVDCPPTFTMYEFDAAVNGAA--------------VVKVPRKSDFSLNVELIADAVER  216 (422)
Q Consensus       161 ~~~~~l~------~--~gd--~Vl~~~p~y~~~~~~~~~~g~~--------------~~~v~~~~~~~~d~~~l~~~i~~  216 (422)
                      .+++...      +  |.+  .|+.....|++-...+-..+..              +..+|     --|.++|+.+++.
T Consensus       131 ta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~-----Y~d~eale~~l~~  205 (427)
T KOG1402|consen  131 TACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVP-----YGDAEALEVALKS  205 (427)
T ss_pred             HHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeec-----cCCHHHHHHHhcC
Confidence            9988432      1  322  3444444443211111111111              11111     1368999999988


Q ss_pred             CCCeEEEEeCCCCccCcCCCH----HHHHHHHcC-CCeEEEccCCccccCCCchhhh--hhcCCcEEEEccChhhhcccc
Q 014594          217 EKPKCIFLTSPNNPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKRAGLAG  289 (422)
Q Consensus       217 ~~~~~i~l~~p~NPtG~~~~~----e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G  289 (422)
                      ++.+++++...+-.-|++.|.    +..++||.. ++++|.||++......+..+..  -.-.++++.   |.|+++-.=
T Consensus       206 ~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivi---lgKalSGG~  282 (427)
T KOG1402|consen  206 PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVI---LGKALSGGV  282 (427)
T ss_pred             CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCCeEE---EeccccCCe
Confidence            889999999889999999986    456677776 9999999999988765543221  111233333   459887333


Q ss_pred             ccceeeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCC-----CcccCCCc
Q 014594          290 LRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPF-----LNPYPSYS  362 (422)
Q Consensus       290 ~r~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~-----~~~~p~~~  362 (422)
                      +.+..++++.+++-.+...  ...|+.|+++.+++.++|+--......++.+..-+.+++.|.+++.     +......|
T Consensus       283 ~Pvsavl~~~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrG  362 (427)
T KOG1402|consen  283 YPVSAVLADDDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRG  362 (427)
T ss_pred             eeeEEEEecHHHHhccCCCccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccc
Confidence            6788888999988776533  3358899999999998885422112777778888888888888642     23346778


Q ss_pred             eEEEEEeC----CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          363 NFILCEVT----SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       363 ~f~~~~~~----~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .+..+.+-    .+.++-+++-.|.++|++..+..    ++.||+.....-..++|.++++.+
T Consensus       363 l~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkptH----~~IiRfaPPL~I~e~dl~eg~e~i  421 (427)
T KOG1402|consen  363 LLNAIVINPSKTSGQDAWDVCLALKENGLLAKPTH----GNIIRFAPPLVISEEDLREGIEAI  421 (427)
T ss_pred             eEEEEEeccccccchhHHHHHHcccccccccCCCC----CCeEEecCCcccCHHHHHHHHHHH
Confidence            88777663    24677778888889999888765    579999976544447788877765

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=99.35  E-value=1.3e-09  Score=105.03  Aligned_cols=316  Identities=14%  Similarity=0.118  Sum_probs=196.6

Q ss_pred             eEEcCCCCCCCCCCHHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcC-CCCEEE
Q 014594           97 IVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD-PGDKIV  174 (422)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~-~gd~Vl  174 (422)
                      +|||-+....-.+.+++.++|..-+  ..| .++....|++.+++++|.  +.++.|..+..+-.++++.+++ +||+++
T Consensus        43 ~IDLrSDTgT~apS~~m~aAM~~GD--D~Y~gdpSv~~Lee~vael~G~--E~alpthqGRgaE~Il~~~~~~~~g~e~g  118 (467)
T TIGR02617        43 FIDLLTDSGTGAVTQSMQAAMMRGD--EAYSGSRSYYALAESVKNIFGY--QYTIPTHQGRGAEQIYIPVLIKKREQEKG  118 (467)
T ss_pred             EEECccCCCCCCCCHHHHHHHHcCC--cccccCchHHHHHHHHHHHhCC--ceEEECCCCchHHHHHHHhhccccccccc
Confidence            5788664443346788888887622  346 667789999999999996  4688888889999999998988 788777


Q ss_pred             EcCC-------Cc-hhHHHHHHHcCCEEEEecC----------CCCCCCCHHHHHHHhhcC---CCeEEEEe-CCCCccC
Q 014594          175 DCPP-------TF-TMYEFDAAVNGAAVVKVPR----------KSDFSLNVELIADAVERE---KPKCIFLT-SPNNPDG  232 (422)
Q Consensus       175 ~~~p-------~y-~~~~~~~~~~g~~~~~v~~----------~~~~~~d~~~l~~~i~~~---~~~~i~l~-~p~NPtG  232 (422)
                      +..+       .| ......+...|+.++.++.          +....+|++++++.+++.   +...+.+. ..|.--|
T Consensus       119 ~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~GG  198 (467)
T TIGR02617       119 LDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAGG  198 (467)
T ss_pred             ccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCCC
Confidence            5443       22 2233456778998887632          123579999999999742   23333333 2233468


Q ss_pred             cCCCHHHHHHHHcC----CCeEEEccCCcc----c------cCCCchhhhh----hcCCcEEEEccChhhhccc-cccce
Q 014594          233 SIINDEDLLKILEM----PILVVLDEAYTE----F------SGLESRMEWV----KKHDNLIVLRTFSKRAGLA-GLRVG  293 (422)
Q Consensus       233 ~~~~~e~l~~i~~~----~~~li~Deay~~----~------~~~~~~~~~~----~~~~~~i~~~S~SK~~~~~-G~r~G  293 (422)
                      .++|.+.++++.+.    |+.++.|.+-..    |      .+.+..+..+    ..+ .+.+..|+||.++.| |   |
T Consensus       199 qpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~-aDsvt~slsKglgApvG---g  274 (467)
T TIGR02617       199 QPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKY-ADMLAMSAKKDAMVPMG---G  274 (467)
T ss_pred             EEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhcc-CCEEEEEcCCCCCCccc---c
Confidence            89999999888764    999999986432    1      1122222222    122 235566899988765 3   5


Q ss_pred             eeecCHH----HHHHHHHhcC-------CCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCc
Q 014594          294 YGAFPLS----IIEYLWRAKQ-------PYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYS  362 (422)
Q Consensus       294 ~i~~~~~----~~~~l~~~~~-------~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~  362 (422)
                      +++++.+    +.++++...-       ..+++.-...++...|.+.--.+..+.-....++|.+.|.+.|.-.+. .+|
T Consensus       275 ~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~~L~~~Gvpi~~-~Gg  353 (467)
T TIGR02617       275 LLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQVQYLVNGLEEIGVVCQQ-AGG  353 (467)
T ss_pred             eEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHhCCCcEEe-cCc
Confidence            6666544    3344333221       125566666666666665311112222234567788888876633334 555


Q ss_pred             eEEEEEe-------C-CCCCHHHHHHHHH-hCCcEEEeCCC------C-------CCCCeEEEEec----ChhhHHHHHH
Q 014594          363 NFILCEV-------T-SGMDAKKLKDDLA-KMGVMIRHYNN------K-------ELKGYVRVSVG----KPEHTDALME  416 (422)
Q Consensus       363 ~f~~~~~-------~-~~~~~~~~~~~L~-~~gI~v~~~~~------~-------~~~~~iRis~~----~~~~~~~l~~  416 (422)
                      .-++++.       | ....+..+...|. +.||.-...+.      +       ..-..+|+.+.    +..++|.+.+
T Consensus       354 hav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~  433 (467)
T TIGR02617       354 HAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIE  433 (467)
T ss_pred             cEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccccccccHhHHHHHHH
Confidence            5555532       2 1345778888876 88887542111      0       11257999976    4566777888


Q ss_pred             HHhhh
Q 014594          417 CLMHL  421 (422)
Q Consensus       417 al~~l  421 (422)
                      ++..+
T Consensus       434 ~~~~~  438 (467)
T TIGR02617       434 AFKHV  438 (467)
T ss_pred             HHHHH
Confidence            77654

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.33  E-value=4.6e-10  Score=105.01  Aligned_cols=276  Identities=18%  Similarity=0.195  Sum_probs=178.8

Q ss_pred             hCCCCCCeEEcCCCCC--CC-CCCHHHHHHHhc-CC-CCC---CCCCcchHHHHHHHHHHcC-CCCCCEEEeCCHHHHHH
Q 014594           90 LGRKPEDIVKIDANEN--PY-GPPPEVREALGQ-LK-FPY---IYPDPESRRLRAALAKDSG-LESDHILVGCGADELID  160 (422)
Q Consensus        90 ~~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~~-~~~---~y~~~~~~~lr~~la~~~~-~~~~~i~~~~G~~~al~  160 (422)
                      ++..+.++||+-++--  -+ +..|++.+++.+ +. ..+   .|-....-++.+.+.+..+ -..+.|.+++++++|++
T Consensus        51 ~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne  130 (433)
T KOG1401|consen   51 FDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEANE  130 (433)
T ss_pred             ecCCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCccccHHHHHHHHHHHhcccCCCccEEEEecCCcHHHH
Confidence            3445678899877632  22 347899999875 22 212   2211124567777777663 25789999999999999


Q ss_pred             HHHHHhcC---C---C--CEEEEcCCCchhHHHHH-HHcCCEEEEecCC---CC----CCCCHHHHHHHhhcCC--CeEE
Q 014594          161 LIMRCVLD---P---G--DKIVDCPPTFTMYEFDA-AVNGAAVVKVPRK---SD----FSLNVELIADAVEREK--PKCI  222 (422)
Q Consensus       161 ~~~~~l~~---~---g--d~Vl~~~p~y~~~~~~~-~~~g~~~~~v~~~---~~----~~~d~~~l~~~i~~~~--~~~i  222 (422)
                      .+++.-.+   .   -  .+++....+|++-...+ ...+......|.+   ++    ..-|..++++.++.++  ..++
T Consensus       131 ~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAV  210 (433)
T KOG1401|consen  131 TALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAV  210 (433)
T ss_pred             HHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEE
Confidence            99984321   1   1  24888888887443332 2233333333321   11    1236899999887543  6889


Q ss_pred             EEeCCCCccCcCC-CHHHHHHH---HcC-CCeEEEccCCccccCCCc--hhhhhhcCCcEEEEccChhhhccccccceee
Q 014594          223 FLTSPNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG  295 (422)
Q Consensus       223 ~l~~p~NPtG~~~-~~e~l~~i---~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i  295 (422)
                      ++...+--.|.+. ++|.+..|   |+. ++++|.||++..|...+.  ....+...+++.   ++.|.++ .|+.+|..
T Consensus       211 IvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~---t~aK~L~-gGlPigA~  286 (433)
T KOG1401|consen  211 IVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDIT---TVAKPLG-GGLPIGAT  286 (433)
T ss_pred             EEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCcce---eehhhcc-CCceeEEE
Confidence            8887777677766 44555444   444 999999999998764332  222333333333   5679987 88999999


Q ss_pred             ecCHHHHHHHHHhcC-----CCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEE
Q 014594          296 AFPLSIIEYLWRAKQ-----PYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFI  365 (422)
Q Consensus       296 ~~~~~~~~~l~~~~~-----~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~  365 (422)
                      ++++++.+.+.....     .|+.|+++..++...|+   +++++. +.+.-+..|+.+.+.+.+.+.... ....+.++
T Consensus       287 ~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~i  366 (433)
T KOG1401|consen  287 GVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVI  366 (433)
T ss_pred             eehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEE
Confidence            999999998864333     47788888888777665   578888 778888889999998887653322 23455665


Q ss_pred             EEEe
Q 014594          366 LCEV  369 (422)
Q Consensus       366 ~~~~  369 (422)
                      .+.+
T Consensus       367 g~~~  370 (433)
T KOG1401|consen  367 GFEF  370 (433)
T ss_pred             EEEE
Confidence            5443

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=99.20  E-value=4.4e-10  Score=108.14  Aligned_cols=275  Identities=18%  Similarity=0.217  Sum_probs=164.7

Q ss_pred             CCCCCeEEcCCC--CCCCC-CCHHHHHHHhcC-C-CCC----CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQL-K-FPY----IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~~-~-~~~----~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      .+++.++|+..+  ...++ .+|++.+++.+. . ..+    .+..+...+|.+.|.+.++-..+++++++++++|++.+
T Consensus        13 ~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~A   92 (339)
T PF00202_consen   13 VDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVEAA   92 (339)
T ss_dssp             TTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHH
T ss_pred             CCCCEEEECCCCccceecCCCccccchhHHHHhhhcccccccceeccchhhhhhhhhhccccccceeeeccCchHHHHHH
Confidence            356778999755  33343 468888888762 1 111    22223356788888888854557999999999999999


Q ss_pred             HHHhc-------CC-CCEEEEcCCCchhHHHHHHH-cC------------CEEEEecCCCCCC-----CCHHHHHHH---
Q 014594          163 MRCVL-------DP-GDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS-----LNVELIADA---  213 (422)
Q Consensus       163 ~~~l~-------~~-gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~-----~d~~~l~~~---  213 (422)
                      ++...       .+ ..+|+....+|++....+.. .+            ..+..+|.++...     -..+.+++.   
T Consensus        93 lkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  172 (339)
T PF00202_consen   93 LKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAA  172 (339)
T ss_dssp             HHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHh
Confidence            99654       12 37899999999754332222 11            1245555321100     001112222   


Q ss_pred             hhcCCCeEEEEeCCCCccCcCCC-H---HHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhc
Q 014594          214 VEREKPKCIFLTSPNNPDGSIIN-D---EDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAG  286 (422)
Q Consensus       214 i~~~~~~~i~l~~p~NPtG~~~~-~---e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~  286 (422)
                      ...+++.+|++.......|...+ .   +++.++|+. |+++|+||++..|...+..  ....+..+++++   ++|.++
T Consensus       173 ~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~---~gK~l~  249 (339)
T PF00202_consen  173 LNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIVT---FGKGLG  249 (339)
T ss_dssp             HHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEE---EEGGGG
T ss_pred             hcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCcccc---cccchh
Confidence            23356788888866666676664 3   444555555 9999999999998644432  223333444443   469998


Q ss_pred             cccccceeeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCcccCC
Q 014594          287 LAGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPYPS  360 (422)
Q Consensus       287 ~~G~r~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~  360 (422)
                       .|+.+|.+++++++.+.+...  ..+|+.++++..++.+.|+--+-.+..++.++..+++.+.|++    .+.+.-...
T Consensus       250 -gG~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg  328 (339)
T PF00202_consen  250 -GGLPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLREGLRELAARYPLIGEVRG  328 (339)
T ss_dssp             -TTSSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred             -hhhhcccccccchhhccccccccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEee
Confidence             679999999999998876432  3457788888888888876421111344444555555554443    344433456


Q ss_pred             CceEEEEEeC
Q 014594          361 YSNFILCEVT  370 (422)
Q Consensus       361 ~~~f~~~~~~  370 (422)
                      .|.++.+++.
T Consensus       329 ~Gl~~~ie~~  338 (339)
T PF00202_consen  329 IGLMIGIELV  338 (339)
T ss_dssp             ETTEEEEEES
T ss_pred             eCeEEEEEEE
Confidence            6777777763

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.18  E-value=1.5e-09  Score=100.69  Aligned_cols=316  Identities=16%  Similarity=0.107  Sum_probs=193.7

Q ss_pred             CCCeEEcCCCC-CCCCCCHHHHHH----HhcCCCC----C-CCCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           94 PEDIVKIDANE-NPYGPPPEVREA----LGQLKFP----Y-IYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        94 ~~~~i~l~~~~-~~~~~~~~v~~a----l~~~~~~----~-~y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      +.++++|.+.. -.+.-.+++.+.    +.+...+    . .|++- -...+++.||+++|+ ++.|+...|-+ +++-+
T Consensus        93 G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~-E~aivYs~gF~-ti~S~  170 (467)
T KOG1358|consen   93 GKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGT-EDAIVYSYGFS-TIESA  170 (467)
T ss_pred             CceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCC-cceeeeccccc-hhhhc
Confidence            55677776543 234445555543    3333222    2 24444 356899999999996 56788877766 56667


Q ss_pred             HHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-----------C-CeEEEEeCCCCc
Q 014594          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----------K-PKCIFLTSPNNP  230 (422)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----------~-~~~i~l~~p~NP  230 (422)
                      +.++++.||.|.+.+-.........+...-.++.+.     +.|.+.+++.+.+.           . -+.|++..-.-+
T Consensus       171 ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fk-----hndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N  245 (467)
T KOG1358|consen  171 IPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFK-----HNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYAN  245 (467)
T ss_pred             chhhhccCcEEEEehhhhHHHHHHHhhhhheeEEec-----CCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccC
Confidence            777999999998888776666666666666666665     34667776665421           1 245666677777


Q ss_pred             cCcCCCHHHHHHHHcC-CCeEEEccCCccccCCC--c-hhh--hhhcCCcEEEEccChhhhccccccceeeecCHHHHHH
Q 014594          231 DGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE--S-RME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY  304 (422)
Q Consensus       231 tG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~--~-~~~--~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~  304 (422)
                      ||.+.+..++-++... ...+|+||.|+...-+.  . ...  ..+..+-+++++|+.-+++..|   |+.+++.-++ .
T Consensus       246 ~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G---gFc~G~~~i~-~  321 (467)
T KOG1358|consen  246 TGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG---GFCAGKSFIA-D  321 (467)
T ss_pred             CCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC---ceeecceeeE-e
Confidence            9999999999999987 99999999998654221  1 111  1223455688899988776555   7777744333 2


Q ss_pred             HHHhcC---CC--CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC--C--C
Q 014594          305 LWRAKQ---PY--NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS--G--M  373 (422)
Q Consensus       305 l~~~~~---~~--~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~--~--~  373 (422)
                      .++...   -|  +.++....++..++.-.+|-. +.+.++.....+-+.|....+..+ ....+..+.+.+..  +  .
T Consensus       322 hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~~s~e  401 (467)
T KOG1358|consen  322 HQRLSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSYGSRE  401 (467)
T ss_pred             eeeccccceeeeccCchhhhhhHHHHHHHHhhCcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecccccchH
Confidence            333322   23  345556666666665544433 556666666666667766543332 33445555555542  1  1


Q ss_pred             C----HHHHHHHHHhCCcEEEeCCC------CCCCCeEEEEecChhhHHHHHHHHhh
Q 014594          374 D----AKKLKDDLAKMGVMIRHYNN------KELKGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       374 ~----~~~~~~~L~~~gI~v~~~~~------~~~~~~iRis~~~~~~~~~l~~al~~  420 (422)
                      +    -+++++.+..+|+.+.....      ...+..+||++...-..++++++...
T Consensus       402 ~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~  458 (467)
T KOG1358|consen  402 KEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAEL  458 (467)
T ss_pred             HHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHH
Confidence            1    23455565545888764322      34466899999753333555555443

>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.17  E-value=5.8e-09  Score=96.11  Aligned_cols=313  Identities=17%  Similarity=0.165  Sum_probs=188.2

Q ss_pred             EEcCCCCCCCCCCHHHHHHHhcC---CCCCCCCCc---chHHH---HHHH-----HHHcCCCCC----CEEEeCCHHHHH
Q 014594           98 VKIDANENPYGPPPEVREALGQL---KFPYIYPDP---ESRRL---RAAL-----AKDSGLESD----HILVGCGADELI  159 (422)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~---~~~~~y~~~---~~~~l---r~~l-----a~~~~~~~~----~i~~~~G~~~al  159 (422)
                      |.|=..||-.  +..|++|+...   .+..+||..   |..++   .|.|     -+.|+++|+    +|..-+|+. |.
T Consensus        43 ieLIaSENFt--s~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSP-AN  119 (477)
T KOG2467|consen   43 IELIASENFT--SRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSP-AN  119 (477)
T ss_pred             eeEeecccch--HHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCc-hh
Confidence            6666666644  57788888752   344455431   11222   2222     234677766    566655554 67


Q ss_pred             HHHHHHhcCCCCEEE---EcCCCch--hHHHHHHHcCCEEEEec-----CC-CCCCCCHHHHHHHhhcCCCeEEEEeCCC
Q 014594          160 DLIMRCVLDPGDKIV---DCPPTFT--MYEFDAAVNGAAVVKVP-----RK-SDFSLNVELIADAVEREKPKCIFLTSPN  228 (422)
Q Consensus       160 ~~~~~~l~~~gd~Vl---~~~p~y~--~~~~~~~~~g~~~~~v~-----~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~  228 (422)
                      ..+..++++|+|+|.   +++..|-  +|....+.-.+.-+++.     .+ ...-+|.|.||+....-+||+|+.-  .
T Consensus       120 favYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG--~  197 (477)
T KOG2467|consen  120 FAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIAG--T  197 (477)
T ss_pred             hHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEEec--c
Confidence            778888999999987   3444552  33322222233333322     22 4456899999998766899988742  2


Q ss_pred             CccCcCCCHHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHH-----
Q 014594          229 NPDGSIINDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-----  301 (422)
Q Consensus       229 NPtG~~~~~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~-----  301 (422)
                      .-.-..++-.++++|++. |.+++.|.+|.. ++..+-....+ ++- +|+..+.+|+  +.|-|.|.|..++.+     
T Consensus       198 SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPF-ey~-DiVTTTTHKs--LRGPRg~mIFyRkGvk~~~~  273 (477)
T KOG2467|consen  198 SAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPF-EYC-DIVTTTTHKS--LRGPRGAMIFYRKGVKSIKP  273 (477)
T ss_pred             ccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcc-ccc-ceeecccccc--ccCCcceeEEEeccCCcCCC
Confidence            224577899999999998 999999999974 22211111111 221 3777788996  478898988864321     


Q ss_pred             ----------HHHHHHhcCC---CCCcHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCce-E
Q 014594          302 ----------IEYLWRAKQP---YNVSVAAEVAACAALQN---PIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSN-F  364 (422)
Q Consensus       302 ----------~~~l~~~~~~---~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~-f  364 (422)
                                -+++...-.|   .++..-...+...+|++   +++.+-.++..++.+.|.+.|.+.|...+.....+ .
T Consensus       274 k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~Gy~lvtgGTDnHl  353 (477)
T KOG2467|consen  274 KQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISRGYKLVTGGTDNHL  353 (477)
T ss_pred             CCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHcCceEecCCccceE
Confidence                      1222222222   22322334444445554   56666777888999999999999886555444344 4


Q ss_pred             EEEEeC-CCCCHHHHHHHHHhCCcEEE----eCCC-CCCCCeEEEEec-------ChhhHHHHHHHHh
Q 014594          365 ILCEVT-SGMDAKKLKDDLAKMGVMIR----HYNN-KELKGYVRVSVG-------KPEHTDALMECLM  419 (422)
Q Consensus       365 ~~~~~~-~~~~~~~~~~~L~~~gI~v~----~~~~-~~~~~~iRis~~-------~~~~~~~l~~al~  419 (422)
                      +++++. .+.|...+...|..-+|.+.    ||+. ...++.|||...       .+++.+++.+.+.
T Consensus       354 vLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~  421 (477)
T KOG2467|consen  354 VLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFID  421 (477)
T ss_pred             EEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHH
Confidence            667875 47777776666666677775    4444 345789999842       2444555554443

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=99.16  E-value=1e-08  Score=93.33  Aligned_cols=257  Identities=14%  Similarity=0.080  Sum_probs=175.1

Q ss_pred             HHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcC--CCCEEEEcCC-Cch----hHHHHHHHcCCEEEEecCCCCCC
Q 014594          132 RRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD--PGDKIVDCPP-TFT----MYEFDAAVNGAAVVKVPRKSDFS  204 (422)
Q Consensus       132 ~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~--~gd~Vl~~~p-~y~----~~~~~~~~~g~~~~~v~~~~~~~  204 (422)
                      ..|-.+++-+.|..+.+++++.+++-.++.++.+.++  +|+.||+++- +|+    .....++..|..     .+-...
T Consensus        79 ~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~-----~~~~~~  153 (407)
T COG3844          79 ERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG-----YDLEGV  153 (407)
T ss_pred             hHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc-----ccceee
Confidence            4577788888899999999999999999888887654  5788888764 443    223344444433     112224


Q ss_pred             CCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChh
Q 014594          205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSK  283 (422)
Q Consensus       205 ~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK  283 (422)
                      .++++++++++ +++.++++++.|--||+.++...+.+++.. |++++-|-+|+-...    ...+...+..+-+++-.|
T Consensus       154 ~~P~~~~~~~~-dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGav----p~~Lh~~gaDfaigcsyK  228 (407)
T COG3844         154 IAPRALEEAIT-DDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAV----PVDLHAAGADFAIGCSYK  228 (407)
T ss_pred             eChHHHHHhhc-cceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCc----ceeecccCCCeeeeeece
Confidence            56789999997 789999999999999999999999999987 999999999985432    112223455678888888


Q ss_pred             hhc-cccccceeeecCHHHHHHHHHhcCC-------------------------CCCcHHHHHHHHHHccC---ChHHHH
Q 014594          284 RAG-LAGLRVGYGAFPLSIIEYLWRAKQP-------------------------YNVSVAAEVAACAALQN---PIYLEV  334 (422)
Q Consensus       284 ~~~-~~G~r~G~i~~~~~~~~~l~~~~~~-------------------------~~~~~~~~~aa~~~L~~---~~~~~~  334 (422)
                      -++ -|| -.+++.+.++..+........                         .+++.++..+...+|+-   -+.-++
T Consensus       229 YLNgGPG-apa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~l  307 (407)
T COG3844         229 YLNGGPG-APAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITEL  307 (407)
T ss_pred             eccCCCC-CceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHH
Confidence            764 244 355666655555443321110                         23445555555555543   232227


Q ss_pred             HHHHHHHHHHHHHHHccC-C--CCc-ccC----CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014594          335 KEALIKERERLFKLLKDV-P--FLN-PYP----SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG  406 (422)
Q Consensus       335 ~~~~~~~~~~l~~~L~~~-~--~~~-~~p----~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~  406 (422)
                      +++--...+++.+.++.. +  ++. ..|    ..|..+.+..|   ...++.++|-++||..-.-.    ++.+|+.++
T Consensus       308 R~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp---~~~~V~qaLi~rGVigD~R~----P~vlRfgft  380 (407)
T COG3844         308 RKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP---HGYQVMQALIDRGVIGDFRE----PDVLRFGFT  380 (407)
T ss_pred             HHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC---cHHHHHHHHHHcCccccccC----CCeeeecCc
Confidence            777777778887777653 1  222 233    34667888876   68899999999999865433    689999976

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.16  E-value=2.8e-08  Score=104.87  Aligned_cols=294  Identities=16%  Similarity=0.147  Sum_probs=186.8

Q ss_pred             CCCCCCCCCCHHHHHHHhc-CCCCCCC-C---C--cc----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cC
Q 014594          101 DANENPYGPPPEVREALGQ-LKFPYIY-P---D--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LD  168 (422)
Q Consensus       101 ~~~~~~~~~~~~v~~al~~-~~~~~~y-~---~--~~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~  168 (422)
                      +.|.-+.-.|+.+.+.+.+ -..-..| |   +  .|    .-+++..++++.|.+..|.-+..+++.+.++++.+. ..
T Consensus        70 g~G~y~~~~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~  149 (939)
T TIGR00461        70 GMGYYGTILPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVS  149 (939)
T ss_pred             CCCcCCCcCChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhh
Confidence            4444444456777756554 2211233 3   2  12    237888999999999888888899999888777664 22


Q ss_pred             --CCCEEEEcCCCchhHHHH----HHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594          169 --PGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (422)
Q Consensus       169 --~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~  242 (422)
                        ++++|++++-.|+.+...    ++..|.+++.++        +++|++.+   ++.++++.+|+. .|.+.+.+++.+
T Consensus       150 ~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~--------~~~l~~~~---~~~~v~~q~Pn~-~G~ied~~~i~~  217 (939)
T TIGR00461       150 KKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD--------CSDIKKAV---DVFGCLLQYPAT-DGSILDYKQLID  217 (939)
T ss_pred             cCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc--------HHHHhhcC---CEEEEEEECCCC-CeEEecHHHHHH
Confidence              347899999999766533    346899988874        44565554   467787788876 999999999988


Q ss_pred             HHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcc----ccccceeeecCHHHHHHHHHh---------
Q 014594          243 ILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL----AGLRVGYGAFPLSIIEYLWRA---------  308 (422)
Q Consensus       243 i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~----~G~r~G~i~~~~~~~~~l~~~---------  308 (422)
                      +++. |.+++++.-...+.    .+....+.+.+|++++- |.||+    .|-..|++.+++++.+.+--.         
T Consensus       218 ~~h~~gal~~~~ad~~al~----ll~~Pge~GaDi~vg~~-q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~  292 (939)
T TIGR00461       218 ALHSHKSLVSVAADLMALT----LLTPPGHYGADIVLGSS-QRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDAL  292 (939)
T ss_pred             HHHHcCCEEEEEechHHhC----CcCCHHHcCCcEEeeCC-CccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCC
Confidence            8887 88888854322222    11222344556777654 43554    244478888888777654200         


Q ss_pred             ------------cC-------CCC--Cc-HHHHHHHH--HHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCce
Q 014594          309 ------------KQ-------PYN--VS-VAAEVAAC--AALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSN  363 (422)
Q Consensus       309 ------------~~-------~~~--~~-~~~~~aa~--~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~  363 (422)
                                  .+       ..+  .+ .+....+.  ..+-.++.+. +.++...+..++.+.|++.|+..+.+  .+
T Consensus       293 G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~--~f  370 (939)
T TIGR00461       293 GNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHELINK--TW  370 (939)
T ss_pred             CCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC--Cc
Confidence                        00       001  11 11111111  2233345566 78888899999999999976433333  33


Q ss_pred             E--EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHH
Q 014594          364 F--ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECL  418 (422)
Q Consensus       364 f--~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al  418 (422)
                      |  +.++++ ..+++++.+.++++||.++...    ++.+++|+.   +.++++.|.+++
T Consensus       371 F~~~~v~~~-~~~~~~i~~~~~~~gi~l~~~~----~~~i~~s~~E~~t~~di~~l~~~~  425 (939)
T TIGR00461       371 FDTLTVKVG-NGISSELLKAAEEFNINLRAVD----TTTVGIALDETTTKADVENLLKVF  425 (939)
T ss_pred             cceEEEEeC-CCCHHHHHHHHHHCCCeeeecC----CCEEEEEeecCCCHHHHHHHHHHh
Confidence            3  345553 2468899999999999988743    468999986   455566666665

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.14  E-value=2.8e-09  Score=103.63  Aligned_cols=236  Identities=19%  Similarity=0.116  Sum_probs=146.0

Q ss_pred             HHHHHHHHHcCCCC-------CCEEEeCCHHHHHHHHHHHhcC--------CC-----C-EEEEcCCCchhHHHHHHHcC
Q 014594          133 RLRAALAKDSGLES-------DHILVGCGADELIDLIMRCVLD--------PG-----D-KIVDCPPTFTMYEFDAAVNG  191 (422)
Q Consensus       133 ~lr~~la~~~~~~~-------~~i~~~~G~~~al~~~~~~l~~--------~g-----d-~Vl~~~p~y~~~~~~~~~~g  191 (422)
                      ++.+.+++++|.+.       ..=++|+|+++++-.++.+..+        .|     . .|++++-+|......+...|
T Consensus        83 ~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lG  162 (373)
T PF00282_consen   83 EVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILG  162 (373)
T ss_dssp             HHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTT
T ss_pred             HHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcceee
Confidence            45566667778762       2468899999998776653311        11     2 46677778999999999999


Q ss_pred             CEEEEecCCCCCCCCHHHHHHHhhcC--C---CeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCC-Cc
Q 014594          192 AAVVKVPRKSDFSLNVELIADAVERE--K---PKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-ES  264 (422)
Q Consensus       192 ~~~~~v~~~~~~~~d~~~l~~~i~~~--~---~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~-~~  264 (422)
                      ..++.||.++++.+|+++|++++.+.  +   +-+|+.+-....||.+-+.++|.+|++. ++|+.+|.+|.....- +.
T Consensus       163 lg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~  242 (373)
T PF00282_consen  163 LGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSALLSPE  242 (373)
T ss_dssp             SEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGGGGHCT
T ss_pred             eEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeeccccccccccccc
Confidence            99999998888899999999988542  2   2255556888999999999999999987 9999999999873210 11


Q ss_pred             hhhhhhc-CCcEEEEccChhhhccccccceeeecCH-HHHHHHHHhcCC-------------------CCCcH----HHH
Q 014594          265 RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQP-------------------YNVSV----AAE  319 (422)
Q Consensus       265 ~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~~l~~~~~~-------------------~~~~~----~~~  319 (422)
                      ....... ....=+..+++|.++ .....|+++.+. ..+.........                   ...+.    +..
T Consensus       243 ~~~~~~gi~~adSit~d~HK~l~-~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~  321 (373)
T PF00282_consen  243 YRHLLFGIERADSITIDPHKWLG-VPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSRRFRALKL  321 (373)
T ss_dssp             TGGGGTTGGGESEEEEETTTTTS--SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHH
T ss_pred             ccccccccccccccccchhhhhc-CCccceeEEeecccchHHHhccChhhhcccccccccccccccccccccccchHHHH
Confidence            1111111 111123447899665 567889888754 333322110000                   11222    222


Q ss_pred             HHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEe
Q 014594          320 VAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEV  369 (422)
Q Consensus       320 ~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~  369 (422)
                      .+....+....+.+..++..+..+++.+.|++.+...+ .+..-+.+.+++
T Consensus       322 w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~  372 (373)
T PF00282_consen  322 WATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRY  372 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEE
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEe
Confidence            22222232334444778888999999999999876553 455556666554

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=98.99  E-value=4.4e-08  Score=88.10  Aligned_cols=178  Identities=19%  Similarity=0.248  Sum_probs=125.7

Q ss_pred             CCCCCcchHHHHHHHHHHcCCCCC--CEEEeCCHHHHHHHHHHHhcCCCCEEEEcC-CCchhHHHH----------HHHc
Q 014594          124 YIYPDPESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCP-PTFTMYEFD----------AAVN  190 (422)
Q Consensus       124 ~~y~~~~~~~lr~~la~~~~~~~~--~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~-p~y~~~~~~----------~~~~  190 (422)
                      ++|.|-|-..|.+-.|+.++.+..  +..+. ++|+|+..++..+++|||+.+... --|......          .+-+
T Consensus        60 YGydD~GRdtLe~vyA~vf~aE~a~VRpq~i-sGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~df  138 (416)
T COG4100          60 YGYDDLGRDTLERVYAQVFGAEAALVRPQII-SGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDF  138 (416)
T ss_pred             CCccccchhHHHHHHHHHhccccceeeeeee-cchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHHh
Confidence            555667888899999999986443  33343 456799999999999999977433 234322222          2446


Q ss_pred             CCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEe-CCCCccCcCCCHHHHHHHHcC------CCeEEEccCCccccCCC
Q 014594          191 GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILEM------PILVVLDEAYTEFSGLE  263 (422)
Q Consensus       191 g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~e~l~~i~~~------~~~li~Deay~~~~~~~  263 (422)
                      |+....+|+..+..+|.+.+...++ +++|+|.+. +-.--.--.++.++++++.+.      ++++.+|.+|.+|....
T Consensus       139 gi~Y~~v~Lt~~gkiD~~~v~~~i~-~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~  217 (416)
T COG4100         139 GIKYKAVPLTADGKIDIQAVKTAIS-DRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEK  217 (416)
T ss_pred             CcceeecccccCCcccHHHHHHhcC-ccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhcc
Confidence            7888889987778999999999998 899999976 432222234567777777653      89999999999998432


Q ss_pred             chhhhhhcCCcEEEEccChhhhcccccc--ceeeecCHHHHHHHHHh
Q 014594          264 SRMEWVKKHDNLIVLRTFSKRAGLAGLR--VGYGAFPLSIIEYLWRA  308 (422)
Q Consensus       264 ~~~~~~~~~~~~i~~~S~SK~~~~~G~r--~G~i~~~~~~~~~l~~~  308 (422)
                      .+.    .-+.++..+|+-|.-| .|+-  .||+++..+++++..-+
T Consensus       218 EPt----~vGaDliAGSLIKNpG-GgiaktGGYiaGk~~~ve~~~yR  259 (416)
T COG4100         218 EPT----HVGADLIAGSLIKNPG-GGIAKTGGYIAGKAELVEAAAYR  259 (416)
T ss_pred             Ccc----ccchhhhccceeeCCC-CceeeccceeechHHHHHhhcee
Confidence            211    1233478888888765 3422  58999999999877533

>PLN02994 1-aminocyclopropane-1-carboxylate synthase

Probab=98.96  E-value=2.3e-09  Score=90.09  Aligned_cols=86  Identities=24%  Similarity=0.496  Sum_probs=66.4

Q ss_pred             CCCCeEEcCCCCCCC-----------------CCCHHHHHHHhcCCCCCCCCCc-chHHHHHHHHHHc----C----CCC
Q 014594           93 KPEDIVKIDANENPY-----------------GPPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDS----G----LES  146 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~-----------------~~~~~v~~al~~~~~~~~y~~~-~~~~lr~~la~~~----~----~~~  146 (422)
                      .+..+|+|+..||.+                 .+++.+.+++.++   ..|++. |..+||+++++++    |    +++
T Consensus        41 np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~---a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~p  117 (153)
T PLN02994         41 NPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI---ALFQDYHGLANFRKAIANFMAEARGGRVKFDA  117 (153)
T ss_pred             CCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH---hcCCCCCCcHHHHHHHHHHHHHHhCCCCccch
Confidence            345678888877743                 2233434444442   336544 7899999999986    4    468


Q ss_pred             CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch
Q 014594          147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT  181 (422)
Q Consensus       147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~  181 (422)
                      ++|++|+|++++++.+++++++|||.|+++.|+|+
T Consensus       118 d~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~  152 (153)
T PLN02994        118 DMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA  152 (153)
T ss_pred             hheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence            89999999999999999999999999999999996

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=98.89  E-value=3.2e-07  Score=87.12  Aligned_cols=212  Identities=17%  Similarity=0.104  Sum_probs=145.4

Q ss_pred             CHHHHHHHhcC-C---CCCCCCCcc--hHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHHHHHhcCCCCEEE-----EcC
Q 014594          110 PPEVREALGQL-K---FPYIYPDPE--SRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLDPGDKIV-----DCP  177 (422)
Q Consensus       110 ~~~v~~al~~~-~---~~~~y~~~~--~~~lr~~la~~~~~~-~~~i~~~~G~~~al~~~~~~l~~~gd~Vl-----~~~  177 (422)
                      .+++++++... .   ....|-..+  ...++..-...+++. .+.++++++.+.++.+++.++.+++..|+     ++ 
T Consensus        40 ~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~lV~-  118 (395)
T COG1921          40 SPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGELVE-  118 (395)
T ss_pred             CHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHHHhhhccCCeEEEEcccccc-
Confidence            57777776652 1   112222222  234554444445553 57899999999999999998887555443     33 


Q ss_pred             CCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCC-ccCcCCCHHHHHHHHcC-CCeEEEccC
Q 014594          178 PTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN-PDGSIINDEDLLKILEM-PILVVLDEA  255 (422)
Q Consensus       178 p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~N-PtG~~~~~e~l~~i~~~-~~~li~Dea  255 (422)
                      +..+......+..|++++.+-..  ..-...+++.+|. +++++++=.+-+| +-=...+.+++.+|++. |+++++|.+
T Consensus       119 gg~~~v~d~~~~aG~~l~EvG~t--n~t~~~d~~~AIn-e~ta~llkV~s~~~~f~~~l~~~~l~~ia~~~~lpvivD~a  195 (395)
T COG1921         119 GGAFRVPDIIRLAGAKLVEVGTT--NRTHLKDYELAIN-ENTALLLKVHSSNYGFTGMLSEEELVEIAHEKGLPVIVDLA  195 (395)
T ss_pred             CCCCChhHHHHHcCCEEEEeccc--CcCCHHHHHHHhc-cCCeeEEEEeeccccccccccHHHHHHHHHHcCCCEEEecC
Confidence            56678899999999999999742  2456899999998 6787776664443 44445788999999997 999999999


Q ss_pred             CccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHcc
Q 014594          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQ  327 (422)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~  327 (422)
                      -.............-..+.++++.|-.|.+|  |.+-|.+++.+++++++++..-  .+.+.....++..++|+
T Consensus       196 Sg~~v~~e~~l~~~la~GaDLV~~SgdKllg--GPqaGii~GkKelI~~lq~~~l~Ralrv~K~tla~l~~aLe  267 (395)
T COG1921         196 SGALVDKEPDLREALALGADLVSFSGDKLLG--GPQAGIIVGKKELIEKLQSHPLKRALRVDKETLAALEAALE  267 (395)
T ss_pred             CccccccccchhHHHhcCCCEEEEecchhcC--CCccceEechHHHHHHHHhhhhhhhhhcCcHhHHHHHHHHH
Confidence            7665443333333334566688889999865  7779999999999998876543  34455555555555544

>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]

Probab=98.83  E-value=6.6e-07  Score=85.49  Aligned_cols=260  Identities=18%  Similarity=0.151  Sum_probs=174.7

Q ss_pred             HHHHHHHHHHcCCCCCC-EEEeCCHHHHHHHHHHHhc----C-CC---CEEEEcCCCchhHHHHHHHcCCEEEEecCC-C
Q 014594          132 RRLRAALAKDSGLESDH-ILVGCGADELIDLIMRCVL----D-PG---DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-S  201 (422)
Q Consensus       132 ~~lr~~la~~~~~~~~~-i~~~~G~~~al~~~~~~l~----~-~g---d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~  201 (422)
                      .+....++.+++.+++. =..|.|+++++.++.+...    + .|   ..++++...+..+...++.++.++..||.+ .
T Consensus       123 ~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~  202 (491)
T KOG1383|consen  123 AECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPLDEG  202 (491)
T ss_pred             HHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeecccc
Confidence            45666677777765442 2567888998666555431    1 23   357777778889999999999999999976 7


Q ss_pred             CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC--CCeEEEccCCccccCC--Cchh--hhhhcCCcE
Q 014594          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGL--ESRM--EWVKKHDNL  275 (422)
Q Consensus       202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~--~~~li~Deay~~~~~~--~~~~--~~~~~~~~~  275 (422)
                      +|.+|+.++.+.++ +++.+++.+-|+.|+|.+=+.+++.++.-.  ++.+.+|.+-..|...  ....  ..+......
T Consensus       203 ~~~~D~~k~~~~i~-eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~  281 (491)
T KOG1383|consen  203 DYRVDPGKVVRMID-ENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVT  281 (491)
T ss_pred             ceEecHHHHHHHhc-cceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCce
Confidence            78999999999998 789999999999999999999999888654  9999999998877641  1111  111111111


Q ss_pred             EEEccChhhhccccccceeeec-CHHHHH-HHH-------HhcCCCC-------CcHHHHHHHHHHccCChHHHHHHHHH
Q 014594          276 IVLRTFSKRAGLAGLRVGYGAF-PLSIIE-YLW-------RAKQPYN-------VSVAAEVAACAALQNPIYLEVKEALI  339 (422)
Q Consensus       276 i~~~S~SK~~~~~G~r~G~i~~-~~~~~~-~l~-------~~~~~~~-------~~~~~~~aa~~~L~~~~~~~~~~~~~  339 (422)
                      =.-.+-+| ||+.--..||++= +.++.. ++.       -....++       ....+|.++..-|..++|.+.-+++.
T Consensus       282 Sisa~~HK-YGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~iv  360 (491)
T KOG1383|consen  282 SISADGHK-YGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIV  360 (491)
T ss_pred             eEeeccce-eeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            11223356 6665555788774 333322 111       0011111       12345666666666678888777899


Q ss_pred             HHHHHHHHHHccCCCCccc-CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC
Q 014594          340 KERERLFKLLKDVPFLNPY-PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN  394 (422)
Q Consensus       340 ~~~~~l~~~L~~~~~~~~~-p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~  394 (422)
                      +..+.+++.+++++++.+. ++.-.|+...- ...+.-++.+.|.++|..+....-
T Consensus       361 e~~~~l~egie~i~~i~i~gkp~vs~~~~~s-~~~~i~elsd~l~~~GW~lnalq~  415 (491)
T KOG1383|consen  361 ETARKLREGIENIKGIKIVGKPLVSFILFGS-NDVNIFELSDLLRKKGWILNALQF  415 (491)
T ss_pred             HHHHHHHHhhhccccceecCCCcEEEEEccC-CccchhhhhHHHHhcCcCccccCC
Confidence            9999999999998877754 32333333322 245667888999999998876654

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=98.82  E-value=2.4e-07  Score=89.95  Aligned_cols=266  Identities=16%  Similarity=0.171  Sum_probs=144.9

Q ss_pred             HHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh---cCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecCCCCCCC
Q 014594          133 RLRAALAKDSGLESDHILVGCGADELIDLIMRCV---LDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSDFSL  205 (422)
Q Consensus       133 ~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l---~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~  205 (422)
                      ++...++++.|.+..+.-+-.|++.+-+.++.+.   -+..++|+++.-.|+.+...    +...|.+++.++.+++...
T Consensus       114 e~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~  193 (429)
T PF02347_consen  114 EYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTT  193 (429)
T ss_dssp             HHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB
T ss_pred             HHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCc
Confidence            7888999999987666667778887777665543   22335899999999877663    3447899999997655454


Q ss_pred             CHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhh
Q 014594          206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR  284 (422)
Q Consensus       206 d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~  284 (422)
                      |         .+++.+|++.+||. .|.+-+.+++.++++. |.++++ .+.- .+-  ..+....+.+.+|++++ +|.
T Consensus       194 d---------~~~~a~v~vq~Pn~-~G~~ed~~~i~~~~h~~gal~~~-~ad~-~aL--~~l~~Pge~GADI~vg~-~Q~  258 (429)
T PF02347_consen  194 D---------DDDTAAVMVQNPNT-FGVFEDIKEIADIAHAAGALVIV-GADP-NAL--GGLKSPGEYGADIVVGE-HQT  258 (429)
T ss_dssp             ----------STTEEEEEEESS-T-TSB--THHHHHHHHHHTT-EEEE-CGGC-CGC--CTC--GGGGT-SEEEEC-CTT
T ss_pred             c---------ccCeEEEEeecCCC-CceEeeHHHHHHHHHHcCCEEEE-ecCH-HHH--hCcCChhhcCccEEeeC-CCC
Confidence            5         37899999999986 9999999999999886 877776 3321 111  11222234455577776 666


Q ss_pred             hcc----ccccceeeecCHHHHHHHH----------------------------HhcCC--CCCc-HHHHHH--HHHHcc
Q 014594          285 AGL----AGLRVGYGAFPLSIIEYLW----------------------------RAKQP--YNVS-VAAEVA--ACAALQ  327 (422)
Q Consensus       285 ~~~----~G~r~G~i~~~~~~~~~l~----------------------------~~~~~--~~~~-~~~~~a--a~~~L~  327 (422)
                      ||.    .|-..|++.+..++++++-                            +-+..  .+.+ .+...+  +...+-
T Consensus       259 fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~  338 (429)
T PF02347_consen  259 FGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYL  338 (429)
T ss_dssp             TT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHH
T ss_pred             CcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHh
Confidence            653    3445788888888776543                            11111  1122 222222  222232


Q ss_pred             CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceE--EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEE
Q 014594          328 NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNF--ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVS  404 (422)
Q Consensus       328 ~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f--~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis  404 (422)
                      .++.+. +.++...+..++.+.|+++. ........+|  +....+ ....+++.+.....|+.....    ..+++-|+
T Consensus       339 G~~GL~~iA~~~~~~A~yl~~~L~~~~-~~~~~~~~f~e~v~~~~~-~~~~~~l~~~~~~~gl~~~~~----~~~~~li~  412 (429)
T PF02347_consen  339 GPEGLREIAERIHLNAHYLAERLKKIY-GLPFDNPFFFEFVVVFSK-DKEVEELLKRGIEGGLNLRYP----DDGALLIC  412 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCTT-BECSSSSSBSSEEEEESS--HHHHHHHHTT----EEEGGG-----SSEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhc-CcccCCCCceeeeeecCC-cHHHHHHHHHHHhcCCCcccc----CCCeEEEE
Confidence            345666 88899999999999999973 2223333333  333332 222223334444445333222    23488888


Q ss_pred             ecChhhHHHHHHHHh
Q 014594          405 VGKPEHTDALMECLM  419 (422)
Q Consensus       405 ~~~~~~~~~l~~al~  419 (422)
                      +....+.++++..++
T Consensus       413 ~TE~~t~edid~lv~  427 (429)
T PF02347_consen  413 VTETRTKEDIDRLVE  427 (429)
T ss_dssp             --TT--HHHHHHHHH
T ss_pred             ccCCCCHHHHHHHHh
Confidence            875444455555443

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=98.82  E-value=1.1e-06  Score=83.19  Aligned_cols=318  Identities=16%  Similarity=0.163  Sum_probs=177.9

Q ss_pred             CCeEEcCCCCCCCCCCHHHH-HHHhcCCCCCCC-CCc---chHHHHHHHHHH----cCCCCCCEEEeCCHHHHHH--HHH
Q 014594           95 EDIVKIDANENPYGPPPEVR-EALGQLKFPYIY-PDP---ESRRLRAALAKD----SGLESDHILVGCGADELID--LIM  163 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~-~al~~~~~~~~y-~~~---~~~~lr~~la~~----~~~~~~~i~~~~G~~~al~--~~~  163 (422)
                      ..++.|++..+-+.+--+.+ ....++...+-| |..   |+.++-..|++|    -|.+.-.+..-.|++.=..  +++
T Consensus        66 ~~m~PLGSCTMK~Np~~e~~~~~~p~f~~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~I  145 (496)
T COG1003          66 RGMIPLGSCTMKLNPKAEMKPATWPEFANIHPFQPEEQVQGYLELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAI  145 (496)
T ss_pred             cCccCCcccccccCchhhcccccccchhhcCCCCChHHHHHHHHHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHH
Confidence            45678887776665432221 111222222444 432   455544444444    4665444445455543222  333


Q ss_pred             HHh-cCCC----CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHH
Q 014594          164 RCV-LDPG----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (422)
Q Consensus       164 ~~l-~~~g----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e  238 (422)
                      +.. -..|    +.||+++..|......+.+.|.+|+.|+.+++..+|+++|+++.. +++.++.+++||. .|..  .+
T Consensus       146 r~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~~G~VDlddLk~k~~-~~~AalMiTnPsT-~GvF--E~  221 (496)
T COG1003         146 RAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDENGNVDLDDLRAKAE-DNLAALMITNPST-LGVF--EE  221 (496)
T ss_pred             HHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEecCCCCCccHHHHHHHhc-cceeEEEeccCcc-cccc--hh
Confidence            333 2233    679999999988888888999999999998888999999999998 7999999999986 4543  35


Q ss_pred             HHHHHHc---C-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccc----cccceeeecCHHHHHHHHH---
Q 014594          239 DLLKILE---M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIEYLWR---  307 (422)
Q Consensus       239 ~l~~i~~---~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----G~r~G~i~~~~~~~~~l~~---  307 (422)
                      .|.+||+   . |..|..|.+-..-..+-..   .++-+.+++=.-++|.|+.|    |-..|=+.+..++...+-.   
T Consensus       222 ~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~r---PGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~  298 (496)
T COG1003         222 DIREICEIVHEAGGQVYYDGANLNAIVGLAR---PGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVV  298 (496)
T ss_pred             hHHHHHHHHHHcCCEEEecCcchhhhhcccc---ccccccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcc
Confidence            5555555   3 9999999886532111111   11222334433467777432    3334545544444433321   


Q ss_pred             -------------------hcCCCCCcHHHHHHHHHHcc--CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC--c-
Q 014594          308 -------------------AKQPYNVSVAAEVAACAALQ--NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY--S-  362 (422)
Q Consensus       308 -------------------~~~~~~~~~~~~~aa~~~L~--~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~--~-  362 (422)
                                         ...+|+- ......+.+.+.  ..+.+. .-+.---+..++...|+..=.+...+..  . 
T Consensus       299 ~~~~~~y~~~~~~~~s~g~~~a~~Gs-~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~y~~~y~~~~~~~H  377 (496)
T COG1003         299 YHDVGEYRLDYDGKKSIGVSAAPYGS-ASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGYYPVPYTGENRVAH  377 (496)
T ss_pred             cCCCccccccCCCCccceeeccccCc-chHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhcCccccCCCCccee
Confidence                               0011211 111222222222  234444 5555556788899999862111112221  1 


Q ss_pred             eEEEEEeC-----CCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEEecC---hhhHHHHHHHHhhh
Q 014594          363 NFILCEVT-----SGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVGK---PEHTDALMECLMHL  421 (422)
Q Consensus       363 ~f~~~~~~-----~~~~~~~~~~~L~~~gI~v~~~~~~-~~~~~iRis~~~---~~~~~~l~~al~~l  421 (422)
                      -|+ ++..     .+.+..+++++|.++|+.--.-..+ -..+.+-|=...   .++.|++.+++..|
T Consensus       378 E~i-ld~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I  444 (496)
T COG1003         378 ECI-LDARPLKKETGVRALDVAKRLLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAI  444 (496)
T ss_pred             EEE-eechHhHhhcCCcHHHHHHHHHhcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHH
Confidence            122 2222     2678999999999999876543322 135666666553   34566666666554

>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]

Probab=98.81  E-value=1.5e-07  Score=84.67  Aligned_cols=307  Identities=14%  Similarity=0.120  Sum_probs=175.6

Q ss_pred             CCCCeEEcCCCCCCC-CCCHHHHHHHhc-CC---CCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-
Q 014594           93 KPEDIVKIDANENPY-GPPPEVREALGQ-LK---FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-  166 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~-~~~~~v~~al~~-~~---~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-  166 (422)
                      ++..++|.-+|.... ..+|+|.+|... +.   ...++-.....+..+.|...+. .-+-+++++++++|.+++++.- 
T Consensus        45 ~g~~yLDCInNVaHvghchp~VV~A~~kQmat~~tN~RFlhd~lv~cA~~l~stlP-eLsvc~F~NSGSEANDLALRLAR  123 (452)
T KOG1403|consen   45 EGTRYLDCINNVAHVGHCHPEVVRAGAKQMATISTNNRFLHDELVQCARTLTSTLP-ELSVCFFVNSGSEANDLALRLAR  123 (452)
T ss_pred             CcccHHHHhhhhhhcccCCHHHHHHHHHHHhHhcccchhhHHHHHHHHHHHhhcCC-CceEEEEecCCchhhHHHHHHHH
Confidence            445555554444333 467888887764 32   2233321112222222222222 1346899999999999999843 


Q ss_pred             --cCCCCEEEEcCCCchhHHHHH------HH-cCC-----EEEEe-cCCCCC----------CCC-----HHHHHHHhhc
Q 014594          167 --LDPGDKIVDCPPTFTMYEFDA------AV-NGA-----AVVKV-PRKSDF----------SLN-----VELIADAVER  216 (422)
Q Consensus       167 --~~~gd~Vl~~~p~y~~~~~~~------~~-~g~-----~~~~v-~~~~~~----------~~d-----~~~l~~~i~~  216 (422)
                        .+..| |++.+..|++.....      +. .|.     ..+.| |.++-+          .-|     .+.+++.++.
T Consensus       124 ~ftkhqD-vItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d  202 (452)
T KOG1403|consen  124 NFTKHQD-VITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQD  202 (452)
T ss_pred             hhcccCc-eEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHH
Confidence              33345 566666664322110      00 111     11111 111110          001     2334444321


Q ss_pred             -----CCCeEEEEeCCCCccCcCCCHHH-HHHHHcC----CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhc
Q 014594          217 -----EKPKCIFLTSPNNPDGSIINDED-LLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG  286 (422)
Q Consensus       217 -----~~~~~i~l~~p~NPtG~~~~~e~-l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~  286 (422)
                           .+..+.+-.+-++-.|.++|+.. ++++++.    |.+.|.||++..|..-++....+..++.+--+-++.|..|
T Consensus       203 ~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmG  282 (452)
T KOG1403|consen  203 QLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMG  282 (452)
T ss_pred             HHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchheecccCC
Confidence                 23445555566777888887754 4445543    8999999999999876666555555554444557789998


Q ss_pred             cccccceeeecCHHHHHHHHHhc----CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC----CCCccc
Q 014594          287 LAGLRVGYGAFPLSIIEYLWRAK----QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV----PFLNPY  358 (422)
Q Consensus       287 ~~G~r~G~i~~~~~~~~~l~~~~----~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~  358 (422)
                       .|..++.+++.+++.+.+....    ..|+.|+.+.++..+.++.-+-..+.+.-.+..++|...|+++    ..+--.
T Consensus       283 -NGhPVa~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDv  361 (452)
T KOG1403|consen  283 -NGHPVAAVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQKHECIGDV  361 (452)
T ss_pred             -CCCeeeEEeccHHHHHHhccccceehhccCCCchhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhccceecc
Confidence             9999999999999999887532    3477888888888888763221114445555556666666543    222224


Q ss_pred             CCCceEEEEEeCC--------CCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEE
Q 014594          359 PSYSNFILCEVTS--------GMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVS  404 (422)
Q Consensus       359 p~~~~f~~~~~~~--------~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis  404 (422)
                      ...|.|+-+++-+        ...+..+..+|+ .++|++..-+.  ..+.+.|-
T Consensus       362 RGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGP--h~NilKiK  414 (452)
T KOG1403|consen  362 RGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGP--HRNILKIK  414 (452)
T ss_pred             ccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCC--CCceeecC
Confidence            5678898887742        123455667777 56788875332  23555553

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=98.79  E-value=3.5e-06  Score=86.20  Aligned_cols=89  Identities=16%  Similarity=0.274  Sum_probs=73.1

Q ss_pred             EEEEcCCCchhHHHHHHHcCC---EEEEecCCCCCCCCHHHHHHHhhc---CC--CeEEEEeCCCCccCcCCCHHHHHHH
Q 014594          172 KIVDCPPTFTMYEFDAAVNGA---AVVKVPRKSDFSLNVELIADAVER---EK--PKCIFLTSPNNPDGSIINDEDLLKI  243 (422)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~---~~--~~~i~l~~p~NPtG~~~~~e~l~~i  243 (422)
                      +|+++.-.|......+...|.   .++.||.++++.+|++.|++.+.+   .+  +-+|+.+-....+|.+=|.++|.+|
T Consensus       224 ~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l  303 (608)
T TIGR03811       224 KWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVAL  303 (608)
T ss_pred             EEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHH
Confidence            577788789999999999998   589999888899999999998853   22  3345556788899999999999999


Q ss_pred             Hc---C-CC--eEEEccCCcccc
Q 014594          244 LE---M-PI--LVVLDEAYTEFS  260 (422)
Q Consensus       244 ~~---~-~~--~li~Deay~~~~  260 (422)
                      ++   . |+  ++.+|.||..+.
T Consensus       304 ~~~~~~~gl~~~lHVDAAyGG~~  326 (608)
T TIGR03811       304 RNKLMKEGIYFYLHVDAAYGGYG  326 (608)
T ss_pred             HHHHHHcCCceeEeeeccccchh
Confidence            83   2 65  799999999753

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=98.74  E-value=2.6e-05  Score=74.15  Aligned_cols=302  Identities=17%  Similarity=0.136  Sum_probs=186.5

Q ss_pred             EcCCCCCCCCCCHHHHHHHhc-CCCCCCC-CC-c----c----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhc
Q 014594           99 KIDANENPYGPPPEVREALGQ-LKFPYIY-PD-P----E----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL  167 (422)
Q Consensus        99 ~l~~~~~~~~~~~~v~~al~~-~~~~~~y-~~-~----~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~  167 (422)
                      .++.|.-+.-.|+.|.+.+.+ -.+-..| |. +    |    .-++...++++.|.+-.|--+--++|.+-++++.+..
T Consensus        79 fiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r  158 (450)
T COG0403          79 FIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKR  158 (450)
T ss_pred             hccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHH
Confidence            345555555566767645544 3332334 32 1    2    2367788888889887787777888888777776652


Q ss_pred             -C--CCCEEEEcCCCchhHHHHHH----HcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccC-cCCCHHH
Q 014594          168 -D--PGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG-SIINDED  239 (422)
Q Consensus       168 -~--~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG-~~~~~e~  239 (422)
                       .  +..+++++.-.|+.+....+    -.|.+++.++.+     |.+.+++. ....+-++++.+|+. .| ...+...
T Consensus       159 ~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-----d~~~l~~~-~~~~~~gv~vQyP~~-~G~~~~d~~~  231 (450)
T COG0403         159 VTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-----DLDDLESA-DDGDVFGVLVQYPNT-FGIVEEDLRA  231 (450)
T ss_pred             hhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-----hhhhhhhc-cccCeEEEEEecCCC-CCccchhHHH
Confidence             2  24789999999987665543    356777777643     78888888 545788999999985 77 6666888


Q ss_pred             HHHHHcC-CCeEEE--ccCCccccCCCchhhhhhcCCcEEEEccChhh---hccccccceeeecCHHHHHHHH-------
Q 014594          240 LLKILEM-PILVVL--DEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR---AGLAGLRVGYGAFPLSIIEYLW-------  306 (422)
Q Consensus       240 l~~i~~~-~~~li~--Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~---~~~~G~r~G~i~~~~~~~~~l~-------  306 (422)
                      +.++++. +.++++  |-.-.      ..+.....++-+|++++..-.   +|..|-..||+.+..++.+++-       
T Consensus       232 l~~~~h~~~al~~v~aDplaL------~LL~pPGe~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S  305 (450)
T COG0403         232 LIEAAHSAGALVIVAADPLAL------GLLKPPGEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVS  305 (450)
T ss_pred             HHHHHhhcCCEEEEEechhHh------hccCCccccCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeee
Confidence            8888876 665543  32111      122223356667888887652   2334667888888888766432       


Q ss_pred             ---------------------HhcCCCCC--cH-H--HHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC-Cccc
Q 014594          307 ---------------------RAKQPYNV--SV-A--AEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF-LNPY  358 (422)
Q Consensus       307 ---------------------~~~~~~~~--~~-~--~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~-~~~~  358 (422)
                                           +-+...|.  +. +  ..+++.+.+..++.+. +.++..+...++.+.|++.+. ..+.
T Consensus       306 ~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~  385 (450)
T COG0403         306 VDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELV  385 (450)
T ss_pred             ecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEec
Confidence                                 11111111  11 1  1222223333455666 888999999999999997652 3333


Q ss_pred             CCCceE--EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          359 PSYSNF--ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       359 p~~~~f--~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      .+ .+|  +.++++. ...+.+.++....|+-++....    +.+=|++.   +.++++.|.+++.
T Consensus       386 ~~-~fFdt~~v~~~~-~~~~~l~~~~~~~G~~L~~~~~----~~~~ia~tEt~t~~~i~~l~~~~~  445 (450)
T COG0403         386 FD-HFFDTFTVRVPE-EVAEALLAAAIAGGINLRRVDA----DTVLIALTETTTKEDIDALVAAFG  445 (450)
T ss_pred             cc-cceeeEEEecch-hHHHHHHHHHHhcCCceeeecC----CceEEEeecccCHHHHHHHHHHHh
Confidence            33 444  4466652 3455666666678999887663    35556654   3555666666654

>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

Probab=98.65  E-value=9.3e-06  Score=75.85  Aligned_cols=306  Identities=14%  Similarity=0.112  Sum_probs=178.8

Q ss_pred             eEEcCCCCCCCCCCHHHHHHHhc-C-C----------CCCCCCCc--chHHHHHHHHHHcCCCCC-CEEEe-CCHHHHHH
Q 014594           97 IVKIDANENPYGPPPEVREALGQ-L-K----------FPYIYPDP--ESRRLRAALAKDSGLESD-HILVG-CGADELID  160 (422)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~-~-~----------~~~~y~~~--~~~~lr~~la~~~~~~~~-~i~~~-~G~~~al~  160 (422)
                      +.+|+.|  |-..+++|++...+ + .          ..|+-...  -..+.++.+.++++++.+ .|++. .|++...+
T Consensus         6 ~~nFsaG--Pa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~   83 (365)
T COG1932           6 VYNFSAG--PAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFA   83 (365)
T ss_pred             CCCCCCC--cccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHH
Confidence            3566664  34446777766654 2 1          11332111  145677888889999655 56555 46788888


Q ss_pred             HHHHHhcCCCCEEEEcCCCchhHH-HHHHHcCC--EEEEec-CCCCC--CCCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594          161 LIMRCVLDPGDKIVDCPPTFTMYE-FDAAVNGA--AVVKVP-RKSDF--SLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (422)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~-~~~~~~g~--~~~~v~-~~~~~--~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~  234 (422)
                      ++...|+.+...-.+....|.... ..++..+-  ++.... .+.++  -++++...  +. ++...|++|+.+.-+|+-
T Consensus        84 ~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~-~~~ayv~~~~NeTi~Gv~  160 (365)
T COG1932          84 MAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FS-DNDAYVHFCWNETISGVE  160 (365)
T ss_pred             HHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cC-CCccEEEEecCCcccceE
Confidence            888888876532134444564322 23344443  222222 12222  23343332  32 334558889888889998


Q ss_pred             CCHHHHHHHHcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc-----
Q 014594          235 INDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK-----  309 (422)
Q Consensus       235 ~~~e~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~-----  309 (422)
                      ++  +...+.. +.++|+|..-.-+...-.    +  ..-.++..|..|.+|..|  ++.++.++++++++....     
T Consensus       161 v~--~~p~~~~-~~~~v~D~SS~ilsr~iD----v--sk~dviyagaQKnlGpaG--ltvvIvr~~~l~r~~~~~~P~if  229 (365)
T COG1932         161 VP--ELPDIGS-DGLLVADASSAILSRPID----V--SKYDVIYAGAQKNLGPAG--LTVVIVRPDLLERAESYTLPSIF  229 (365)
T ss_pred             cc--CCCCCCC-CceEEEecccHHhcCCCC----h--hHcceEEEehhhccCccc--eEEEEEcHHHHhcccccCCchHh
Confidence            87  1111111 388999977554432211    1  122367778999999888  888999999999886541     


Q ss_pred             ---------CCCC-CcHHHHHHHH---HHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcc--cC--CCceEEEEEeCC
Q 014594          310 ---------QPYN-VSVAAEVAAC---AALQNPIYLE-VKEALIKERERLFKLLKDVPFLNP--YP--SYSNFILCEVTS  371 (422)
Q Consensus       310 ---------~~~~-~~~~~~~aa~---~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~--~p--~~~~f~~~~~~~  371 (422)
                               ..|+ ++.++.+...   .++...+.++ +.++-+++.+.|.+.+.+-++...  .+  ..-+-+.+++.+
T Consensus       230 ~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~mnV~f~~~~  309 (365)
T COG1932         230 DYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRMNVTFTLVD  309 (365)
T ss_pred             hchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhhccceeEEEEcCc
Confidence                     1233 3444444433   3333444555 777888889999999988776542  22  122456677764


Q ss_pred             CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHHHHHHHHhh
Q 014594          372 GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTDALMECLMH  420 (422)
Q Consensus       372 ~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~~l~~al~~  420 (422)
                      ..-...|...+.++|+..--|.  ...+.+|+|+..   .++.+.|...++.
T Consensus       310 ~~ld~~fv~eae~~gl~~lkGh--r~vgGmRasiynA~~~e~veaL~~fm~~  359 (365)
T COG1932         310 AELDKGFVAEAEAAGLIYLKGH--RSVGGLRASIYNAVPLEDVEALTDFMDW  359 (365)
T ss_pred             HHHHHHHHHHHHHcCCceeccc--cCCCceeeeeecCCCHHHHHHHHHHHHH
Confidence            3344667777777877766653  234459999753   4556667666654

>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]

Probab=98.56  E-value=7.1e-05  Score=69.55  Aligned_cols=289  Identities=17%  Similarity=0.185  Sum_probs=179.6

Q ss_pred             CC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCC-----CCEEEEcCCCch-hHHHHHHHcCCEEEEe
Q 014594          125 IY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDP-----GDKIVDCPPTFT-MYEFDAAVNGAAVVKV  197 (422)
Q Consensus       125 ~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~-----gd~Vl~~~p~y~-~~~~~~~~~g~~~~~v  197 (422)
                      .| +..++..|++++.+.+|.  +.++.|.-+..|=+++...++++     |.+..+++..|. ......+..|+.++.+
T Consensus        74 AYagsrs~~~L~~avkdifGf--q~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~  151 (471)
T COG3033          74 AYAGSRSYYALADAVKDIFGF--QYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNV  151 (471)
T ss_pred             hhcccccHHHHHHHHHHhcCc--eeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcCCccccc
Confidence            45 455788999999999996  57888887777777777766654     444455556554 4445556688888777


Q ss_pred             cCCC----------CCCCCHHHHHHHhhc---CCCeEEEEe-CCCCccCcCCCHHHHHHHHc---C-CCeEEEccCCc-c
Q 014594          198 PRKS----------DFSLNVELIADAVER---EKPKCIFLT-SPNNPDGSIINDEDLLKILE---M-PILVVLDEAYT-E  258 (422)
Q Consensus       198 ~~~~----------~~~~d~~~l~~~i~~---~~~~~i~l~-~p~NPtG~~~~~e~l~~i~~---~-~~~li~Deay~-~  258 (422)
                      +.++          ...+|+++|++.|.+   ++...|+++ ..|.-.|+..+.+-+++..+   . ++.++.|.+-- +
T Consensus       152 ~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaE  231 (471)
T COG3033         152 YVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAE  231 (471)
T ss_pred             cccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhh
Confidence            6321          135899999999975   455677776 67778899998887777654   3 99999997632 1


Q ss_pred             ---cc------CCCchhhhhh----cCCcEEEEccChhhhccccccceeeecCHH----HHHHHHHhcC------C-CCC
Q 014594          259 ---FS------GLESRMEWVK----KHDNLIVLRTFSKRAGLAGLRVGYGAFPLS----IIEYLWRAKQ------P-YNV  314 (422)
Q Consensus       259 ---~~------~~~~~~~~~~----~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~----~~~~l~~~~~------~-~~~  314 (422)
                         |.      +.+..+..+.    .+.. -.+.|.-|. |+..+ .|++..+.+    +...++...-      . .++
T Consensus       232 NaYFIk~rE~gYrd~sI~~IarEm~sYaD-~~~mS~KKD-~lvnm-GGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl  308 (471)
T COG3033         232 NAYFIKQREPGYRDWSIEEIAREMYSYAD-GCTMSAKKD-GLVNM-GGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGL  308 (471)
T ss_pred             hhhhhhhcCcccccccHHHHHHHHHhhhh-hheeecccc-ceecc-ccEEEecCccHHHHHHHHHhheEeeccccccCcc
Confidence               11      1111111110    1222 233455564 33221 266776554    4555543321      1 245


Q ss_pred             cHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeC--------CCCCHHHHHHHHH
Q 014594          315 SVAAEVAACAALQN---PIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT--------SGMDAKKLKDDLA  383 (422)
Q Consensus       315 ~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~--------~~~~~~~~~~~L~  383 (422)
                      +.-...+....|.+   .+|++  .+ ....++|.+.|.+.|.-.+.|.+|.=++++..        +...++.|+-.|.
T Consensus       309 ~GrdmealAvGL~e~~~~~yl~--~R-v~Qv~YL~~~l~~~GVpi~~paGGHavfvda~~~lphip~eqFpaqala~ely  385 (471)
T COG3033         309 AGRDMEALAVGLREGVNFDYLA--HR-VAQVQYLADGLEEAGVPIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACELY  385 (471)
T ss_pred             cchhHHHHHHHHHHhcCcHHHH--HH-HHHHHHHHHHHHhcCCeeEecCCCceEEeehhhhcCCCChhhCcHHHHHHHHH
Confidence            55556666666654   35554  22 24467888999988743456777766666542        1245777877776


Q ss_pred             -hCCcEEEeCCC-------------CCCCCeEEEEec----ChhhHHHHHHHHhhh
Q 014594          384 -KMGVMIRHYNN-------------KELKGYVRVSVG----KPEHTDALMECLMHL  421 (422)
Q Consensus       384 -~~gI~v~~~~~-------------~~~~~~iRis~~----~~~~~~~l~~al~~l  421 (422)
                       +.||.....+.             +..-..+|+++.    +.+.+|.+.++++++
T Consensus       386 ~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l  441 (471)
T COG3033         386 KEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKAL  441 (471)
T ss_pred             HHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHH
Confidence             88988864322             111257999975    467788888888775

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=98.41  E-value=3e-07  Score=86.56  Aligned_cols=213  Identities=18%  Similarity=0.138  Sum_probs=50.4

Q ss_pred             hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch------hHHHHHHHcCCEEEEecCCCCCC
Q 014594          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT------MYEFDAAVNGAAVVKVPRKSDFS  204 (422)
Q Consensus       131 ~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~------~~~~~~~~~g~~~~~v~~~~~~~  204 (422)
                      +..+.+.++...|.  +..+++|+...|+.+++..++. |.+|+++...-.      ......+..|++++.|-..+  .
T Consensus        49 ~~~v~~ll~~ltgA--eaA~VvNnnaAAv~L~l~~la~-~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN--~  123 (367)
T PF03841_consen   49 YAHVEELLCELTGA--EAALVVNNNAAAVLLALNTLAK-GKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTN--R  123 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccccc--cccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccc--c
Confidence            35677777777774  5677888888899888887764 667777664332      24456667899999887432  3


Q ss_pred             CCHHHHHHHhhcCCCeEEEEeCCCCccCc----CCCHHHHHHHHcC-CCeEEEccCCcccc--------CCCchhhhhhc
Q 014594          205 LNVELIADAVEREKPKCIFLTSPNNPDGS----IINDEDLLKILEM-PILVVLDEAYTEFS--------GLESRMEWVKK  271 (422)
Q Consensus       205 ~d~~~l~~~i~~~~~~~i~l~~p~NPtG~----~~~~e~l~~i~~~-~~~li~Deay~~~~--------~~~~~~~~~~~  271 (422)
                      -.+++++++|+ ++|.+|+-.|++|-.-.    ..+.+++.+|++. ++++++|-.-..+.        ..+.....+ .
T Consensus       124 t~~~Dye~AI~-e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~-~  201 (367)
T PF03841_consen  124 THLSDYEKAIT-ENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYL-A  201 (367)
T ss_dssp             --------------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CC-C
T ss_pred             ccccccccccc-ccccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHh-h
Confidence            45788999998 78999988888886322    4588999999987 99999997753221        112222222 3


Q ss_pred             CCcEEEEccChhhhccccccceeeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHccC-----C--------hHHH-HH
Q 014594          272 HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQN-----P--------IYLE-VK  335 (422)
Q Consensus       272 ~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~~-----~--------~~~~-~~  335 (422)
                      .+.++++.|-.|.+|  |-..|.+++.+++++++++.  .+.+-+......++.+.|+.     .        ..+. ..
T Consensus       202 ~GaDlV~fSGdKlLG--GPQaGiI~Gkk~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~  279 (367)
T PF03841_consen  202 AGADLVTFSGDKLLG--GPQAGIIVGKKELIEKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSL  279 (367)
T ss_dssp             CT-SEEEEETTSSSS--S-S-EEEEEEHHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH---------------------
T ss_pred             cCCCEEEEECCCcCC--CCCeEEEEeCHHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhcccccccccccccccc
Confidence            455688889999876  44589999999999998754  33455666665555555541     1        1122 44


Q ss_pred             HHHHHHHHHHHHHHccC
Q 014594          336 EALIKERERLFKLLKDV  352 (422)
Q Consensus       336 ~~~~~~~~~l~~~L~~~  352 (422)
                      +.++++.+.+...|+..
T Consensus       280 ~~L~~rA~~l~~~l~~~  296 (367)
T PF03841_consen  280 EELRARAERLAAQLKAA  296 (367)
T ss_dssp             -----------------
T ss_pred             ccccccccccccccccc
Confidence            56667777777777654

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]

Probab=98.39  E-value=0.00011  Score=69.64  Aligned_cols=288  Identities=16%  Similarity=0.132  Sum_probs=172.1

Q ss_pred             HHHHHHHHHcCCCC--CCEEEeCCHHHHHHHHHHHhcC--C-----C-----CEEE-EcCCCchhHHHHHHHcC---CEE
Q 014594          133 RLRAALAKDSGLES--DHILVGCGADELIDLIMRCVLD--P-----G-----DKIV-DCPPTFTMYEFDAAVNG---AAV  194 (422)
Q Consensus       133 ~lr~~la~~~~~~~--~~i~~~~G~~~al~~~~~~l~~--~-----g-----d~Vl-~~~p~y~~~~~~~~~~g---~~~  194 (422)
                      ++-..+.+..|.+.  |.|+.-.|+.+.+..+..+-.+  |     |     +-|+ +++-+|.+....+...|   -.+
T Consensus       145 ~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c  224 (510)
T KOG0629|consen  145 EVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHC  224 (510)
T ss_pred             HHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCcee
Confidence            44445555556654  4555545555555544433211  1     2     3333 56667888888888888   578


Q ss_pred             EEecCCCCCCCCHHHHHHHhhcCCCe----EEE-EeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCC-chhh
Q 014594          195 VKVPRKSDFSLNVELIADAVEREKPK----CIF-LTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE-SRME  267 (422)
Q Consensus       195 ~~v~~~~~~~~d~~~l~~~i~~~~~~----~i~-l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~-~~~~  267 (422)
                      +.|+.+....+++++||+.|.+.+.+    +++ .+.-....|..-|++.+.++|+. ++|+.+|.+|....--. ....
T Consensus       225 ~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~  304 (510)
T KOG0629|consen  225 IKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRH  304 (510)
T ss_pred             EEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHh
Confidence            88998888899999999998543333    232 23456788999999999999988 99999999998632111 1111


Q ss_pred             hh-hcCCcEEEEccChhhhccccccceeeecCHH-HHHHHHHhcC--------CCCCcH---------------HHHHHH
Q 014594          268 WV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLWRAKQ--------PYNVSV---------------AAEVAA  322 (422)
Q Consensus       268 ~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~-~~~~l~~~~~--------~~~~~~---------------~~~~aa  322 (422)
                      .+ ......-+..+.+|..| +.+..+..+.+.+ ++++..+...        .|.+|.               +-.-..
T Consensus       305 kl~Giera~SvtwnpHK~~g-aplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlm  383 (510)
T KOG0629|consen  305 KLTGIERANSVTWNPHKLMG-APLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLM  383 (510)
T ss_pred             hccCccccCceeecHHHhhc-CcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHHH
Confidence            11 11111134556789887 6677887776543 5555443322        122211               111111


Q ss_pred             HHHccCChHHHHHHHHHHHHHHHHHHHccCCCCc-c---cCCCceEEEEEeCCCC---------------CHHHHHHHHH
Q 014594          323 CAALQNPIYLEVKEALIKERERLFKLLKDVPFLN-P---YPSYSNFILCEVTSGM---------------DAKKLKDDLA  383 (422)
Q Consensus       323 ~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~---~p~~~~f~~~~~~~~~---------------~~~~~~~~L~  383 (422)
                      ..+=....+...+++.-++.+++.+.|++-+... +   .|+..++.+..+|+..               -+-.+...+.
T Consensus       384 wkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm  463 (510)
T KOG0629|consen  384 WKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRGWQENPERDSRLVKVAPKIKERMM  463 (510)
T ss_pred             HHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhccCcccchhhhHHHhhCcHHHHHHH
Confidence            1111112333378888999999999999876432 2   2444666655555211               1223456666


Q ss_pred             hCCcEEEeCCC-CCCCCeEEEEecC----hhhHHHHHHHHhhh
Q 014594          384 KMGVMIRHYNN-KELKGYVRVSVGK----PEHTDALMECLMHL  421 (422)
Q Consensus       384 ~~gI~v~~~~~-~~~~~~iRis~~~----~~~~~~l~~al~~l  421 (422)
                      ++|-....+.. ...++++|+.++.    ..+++-+.+-|+++
T Consensus       464 ~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerl  506 (510)
T KOG0629|consen  464 KKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERL  506 (510)
T ss_pred             hccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence            88877776665 4457899998864    34567777777665

>PRK12566 glycine dehydrogenase; Provisional

Probab=98.30  E-value=0.00065  Score=72.21  Aligned_cols=295  Identities=15%  Similarity=0.088  Sum_probs=173.4

Q ss_pred             EcCCCCCCCCCCHHHHHHHhc-CCCCCCC-C---C--cc----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhc
Q 014594           99 KIDANENPYGPPPEVREALGQ-LKFPYIY-P---D--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL  167 (422)
Q Consensus        99 ~l~~~~~~~~~~~~v~~al~~-~~~~~~y-~---~--~~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~  167 (422)
                      .++.|.-+.-.|+.+.+.+.+ -..-..| |   +  .|    .-++...++++.|.+..|--+-.|++.+-+.++.+..
T Consensus        83 fiG~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~  162 (954)
T PRK12566         83 LIGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKR  162 (954)
T ss_pred             cccccccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHH
Confidence            344454444456666455544 3322333 3   2  12    2367888899999876666666676666554444331


Q ss_pred             -C--CCCEEEEcCCCchhHHHH----HHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHH
Q 014594          168 -D--PGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL  240 (422)
Q Consensus       168 -~--~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l  240 (422)
                       .  +..+|+++.-.|+.+...    ++..|.+++.           +++++.+. .++-++++.+||. .|.+.+.+++
T Consensus       163 ~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-----------~~~~~~~~-~~~~~v~vq~P~~-~G~i~d~~~i  229 (954)
T PRK12566        163 VAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-----------DAVDNLAA-HAVFGALLQYPDT-HGEIRDLRPL  229 (954)
T ss_pred             HhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-----------cchhhcCC-CCEEEEEEECCCC-ceEEccHHHH
Confidence             2  246799999999876653    3346777764           23334444 4688898889975 8999998999


Q ss_pred             HHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccCh---hhhccccccceeeecCHHHHHHHH----------
Q 014594          241 LKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS---KRAGLAGLRVGYGAFPLSIIEYLW----------  306 (422)
Q Consensus       241 ~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~S---K~~~~~G~r~G~i~~~~~~~~~l~----------  306 (422)
                      .++++. |.++| +.+.- +..  ..+....+++.+|++++-.   =-+|..|-..||+.+.+++.+++-          
T Consensus       230 ~~~~h~~gal~~-~~~d~-laL--~ll~~Pge~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~  305 (954)
T PRK12566        230 IDQLHGQQALAC-VAADL-LSL--LVLTPPGELGADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDA  305 (954)
T ss_pred             HHHHHHcCCEEE-EEeCH-HHH--hCCCChhhcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecC
Confidence            888876 76644 32211 000  1122234566678777532   223334555788888887776542          


Q ss_pred             ------------------HhcCCCCC--cH-H-H-HHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCc
Q 014594          307 ------------------RAKQPYNV--SV-A-A-EVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYS  362 (422)
Q Consensus       307 ------------------~~~~~~~~--~~-~-~-~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~  362 (422)
                                        +-+...+.  +. + + .++...++..++.+. +.++...+..++.+.|.+.|+ .+.. ..
T Consensus       306 ~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~-~~~~-~~  383 (954)
T PRK12566        306 RGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKGI-KRLN-RH  383 (954)
T ss_pred             CCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCC-cccc-CC
Confidence                              11111111  11 1 1 222223343456566 778888899999999999664 3322 24


Q ss_pred             eE--EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHHHHHHHH
Q 014594          363 NF--ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTDALMECL  418 (422)
Q Consensus       363 ~f--~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~~l~~al  418 (422)
                      +|  +.+++  +.+++++.+...++||-++..+    ++.+.||+..   .++.+.|..++
T Consensus       384 fF~~~~v~~--~~~~~~~~~~a~~~~~n~r~~~----~~~~~~s~de~~~~~~~~~~~~~f  438 (954)
T PRK12566        384 FFDTLTLEV--GGAQAAIIESAEAARINLRILG----RGRLGVSLDETCDEATVARLFDIF  438 (954)
T ss_pred             ccceEEEEc--cCCHHHHHHHHHHCCCeeEEeC----CCeEEEEeCCCCCHHHHHHHHHHh
Confidence            44  33444  2257888888889999999875    3678888864   34444444444

>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]

Probab=98.05  E-value=0.00012  Score=67.95  Aligned_cols=185  Identities=15%  Similarity=0.109  Sum_probs=107.1

Q ss_pred             HHHHHHHhhcC-----CCeEEEEeCCCCccCcCC-CHHHHHHH---HcC-CCeEEEccCCccccCCCchh----hhhhcC
Q 014594          207 VELIADAVERE-----KPKCIFLTSPNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRM----EWVKKH  272 (422)
Q Consensus       207 ~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~-~~e~l~~i---~~~-~~~li~Deay~~~~~~~~~~----~~~~~~  272 (422)
                      ++++|+.|.+.     .+.+|++...+..-|.-. +.+.++.|   ++. ++.+|+||++......+...    ..++..
T Consensus       255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P  334 (484)
T KOG1405|consen  255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP  334 (484)
T ss_pred             HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence            56677777542     345677666677666544 66555554   444 99999999998654333211    111222


Q ss_pred             CcEEEEccChhhhccccccceeeecCHHHHH-HHHHhcCCCCCcHHHHHHHHHH---ccCChHHHHHHHHHHHHHHHHHH
Q 014594          273 DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE-YLWRAKQPYNVSVAAEVAACAA---LQNPIYLEVKEALIKERERLFKL  348 (422)
Q Consensus       273 ~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~-~l~~~~~~~~~~~~~~~aa~~~---L~~~~~~~~~~~~~~~~~~l~~~  348 (422)
                      ..   +-+|||-|- .|   ||.. +++++- .-.+.-..|...+.-...+.++   +++.+   +.+..+...+.|...
T Consensus       335 pD---~vTFSKK~q-~g---Gffh-~~~frpn~pYrifNTWmGdP~k~lll~~vv~~I~~~~---Ll~n~~~vG~~l~~g  403 (484)
T KOG1405|consen  335 PD---VVTFSKKFQ-TG---GFFH-DEEFRPNEPYRIFNTWMGDPSKNLLLEEVVQEIKRED---LLNNVAHVGKALLKG  403 (484)
T ss_pred             cc---ceehhhhhh-cC---cccc-CcccCCCchHHHhhhhcCChHHHHHHHHHHHHHhHHH---HHHHHHHHHHHHHHH
Confidence            22   337899885 54   5554 333332 1223334454443332223333   33333   333344445555555


Q ss_pred             Hcc----CCCC-cccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014594          349 LKD----VPFL-NPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG  406 (422)
Q Consensus       349 L~~----~~~~-~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~  406 (422)
                      |.+    .|.. .-....|.|+.+++|.+.-.+.++..++-+|+-+-.|+    ...||+-.+
T Consensus       404 L~~Lq~~~p~~~~~~RGrGTF~a~d~ps~~~Rdk~i~~~~~nGv~~GGCg----~~siRfRPs  462 (484)
T KOG1405|consen  404 LLELQAKYPGKINNLRGRGTFIAWDCPSGSIRDKLILIARLNGVNLGGCG----DKSIRFRPS  462 (484)
T ss_pred             HHHHHHhCchhhhcccccceEEEEeCCChHHHHHHHHHHHHcCceecccc----cceeeeccc
Confidence            543    3432 23567899999999987777889999999999988776    466777654

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=97.78  E-value=0.006  Score=58.46  Aligned_cols=276  Identities=16%  Similarity=0.044  Sum_probs=145.3

Q ss_pred             cCCC-CCCEEEeCCHHH-HHHHHHHHhc--CCCCEEEEcCCCchhHHHHHHHcCCEEEEecC---CCCCCCCHHHHHHHh
Q 014594          142 SGLE-SDHILVGCGADE-LIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADAV  214 (422)
Q Consensus       142 ~~~~-~~~i~~~~G~~~-al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~~d~~~l~~~i  214 (422)
                      .|+. ....++.+.+|. .+.+.+.++.  ..++.|+.+.-.+-.....+..+|.+++.|+.   ++....|.+.+++.+
T Consensus        69 ~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i  148 (389)
T PF05889_consen   69 AGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKI  148 (389)
T ss_dssp             TTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHH
T ss_pred             cCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHH
Confidence            4664 345666666553 3334444443  35688988877666666677789999999982   233456788888888


Q ss_pred             hc--CCCeEEEEeCCCCccCcCCC-HHHHHHHHcC-CCeEEEccCCccccCCCchhhhh----hcCCcEEEEccChhhhc
Q 014594          215 ER--EKPKCIFLTSPNNPDGSIIN-DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWV----KKHDNLIVLRTFSKRAG  286 (422)
Q Consensus       215 ~~--~~~~~i~l~~p~NPtG~~~~-~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~----~~~~~~i~~~S~SK~~~  286 (422)
                      ++  ....+.++++++---|...+ .+++.+||+. |+..|+-.||.--..  .....+    ....-.+++.|.-|.|-
T Consensus       149 ~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~--~~~~~i~~a~~~GRvda~vqS~dkNF~  226 (389)
T PF05889_consen  149 EELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSS--KCMHLIQQAWRVGRVDAFVQSTDKNFM  226 (389)
T ss_dssp             HHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-H--HHHHHHHHHHHHSTCSEEEEEHHHHHC
T ss_pred             HHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHH--HHHHHHHHHHhcCCcceeeeecCCCEE
Confidence            64  34567777888777788887 8899999987 999999999984211  111111    11233478999999995


Q ss_pred             cccccceeeec-CHHHHHHHHHhcCCCCCcHHHHHHHHHHcc--CChHHHHHHHHHHHHHHHHHHHc----cCCCCc-cc
Q 014594          287 LAGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQ--NPIYLEVKEALIKERERLFKLLK----DVPFLN-PY  358 (422)
Q Consensus       287 ~~G~r~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~--~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~-~~  358 (422)
                       -+...+.+.+ ++..+..+.+.-..-....+.......+|.  ...|........+...++.+.|+    +.+... ..
T Consensus       227 -VPvGgai~As~~~~~i~~vs~~YpGRas~sp~ld~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~~  305 (389)
T PF05889_consen  227 -VPVGGAIMASFDPSGILAVSKEYPGRASASPSLDLFITLLSLGCTGYGALLKERKASFPYLKERLKKWAEEVGERLLET  305 (389)
T ss_dssp             -EESSHEEEEESSHHHHHHHHHTSHSHBTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSSS
T ss_pred             -ecCCCcEEEecCHHHHHHHHHHhhhhhhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC
Confidence             4433444444 566777776543221111222222333333  22443333333344444444443    333211 13


Q ss_pred             CCCceEEEEEeCC-----CCCHHHHHHHHHhCCc---EEEeCCCCC--------CCCeEEEEe--c-ChhhHHHHHHHHh
Q 014594          359 PSYSNFILCEVTS-----GMDAKKLKDDLAKMGV---MIRHYNNKE--------LKGYVRVSV--G-KPEHTDALMECLM  419 (422)
Q Consensus       359 p~~~~f~~~~~~~-----~~~~~~~~~~L~~~gI---~v~~~~~~~--------~~~~iRis~--~-~~~~~~~l~~al~  419 (422)
                      |...--+.+.++.     ..+.-.|...|..+||   .+.......        ...|+-++-  + +.+|+|.+.+.|+
T Consensus       306 p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~eevd~~v~rL~  385 (389)
T PF05889_consen  306 PRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMTREEVDYFVKRLD  385 (389)
T ss_dssp             TT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--HHHHHHHHHHHH
T ss_pred             CCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhCCCHHHHHHHHHHHH
Confidence            4444444555542     1234577788887754   422211111        136888843  3 4555666666665


Q ss_pred             h
Q 014594          420 H  420 (422)
Q Consensus       420 ~  420 (422)
                      +
T Consensus       386 k  386 (389)
T PF05889_consen  386 K  386 (389)
T ss_dssp             H
T ss_pred             H
Confidence            4

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]

Probab=97.71  E-value=0.0025  Score=58.21  Aligned_cols=165  Identities=15%  Similarity=0.089  Sum_probs=115.5

Q ss_pred             hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCC---CEEEEcCCCch----hHHHHHHHcCCEE----EEec-
Q 014594          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG---DKIVDCPPTFT----MYEFDAAVNGAAV----VKVP-  198 (422)
Q Consensus       131 ~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~g---d~Vl~~~p~y~----~~~~~~~~~g~~~----~~v~-  198 (422)
                      .+..-..++...|...+.|.+.++-|-.+..++-.+.+|-   -+|+++.-.|+    .+...++..|..+    +.+. 
T Consensus       113 De~il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~ieP  192 (465)
T KOG3846|consen  113 DEPILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEP  192 (465)
T ss_pred             chhhhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecc
Confidence            4567788888999988999999999999999999998875   45888887775    4455666778753    3332 


Q ss_pred             CCCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcE
Q 014594          199 RKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNL  275 (422)
Q Consensus       199 ~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~  275 (422)
                      .+.+..+-.+++...|.+  +...+|+++..+--||+.++...|..-.+. |+++=.|-+|+..   . ..-.+-+++..
T Consensus       193 REGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvg---N-VpL~LHdWgVD  268 (465)
T KOG3846|consen  193 REGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVG---N-VPLQLHDWGVD  268 (465)
T ss_pred             cccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhc---C-CceEEeecCCc
Confidence            334446777888888764  346677778999999999999888866665 9999899888731   1 11122356666


Q ss_pred             EEEccChhhhccccc-cceeeecCHH
Q 014594          276 IVLRTFSKRAGLAGL-RVGYGAFPLS  300 (422)
Q Consensus       276 i~~~S~SK~~~~~G~-r~G~i~~~~~  300 (422)
                      +.+..--|-. .+|. .+|-+.+.+.
T Consensus       269 FACWCSYKYl-naGaGgIgGlFvHek  293 (465)
T KOG3846|consen  269 FACWCSYKYL-NAGAGGIGGLFVHEK  293 (465)
T ss_pred             eEEEeeeccc-ccCCCccceeeeehh
Confidence            7777767743 3442 2554554443

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=97.60  E-value=0.0083  Score=60.20  Aligned_cols=280  Identities=15%  Similarity=0.133  Sum_probs=147.7

Q ss_pred             HHHHHHHHHcCCCCCCEEEeCCHH---HHHHHHHHHhcCCC----CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCC
Q 014594          133 RLRAALAKDSGLESDHILVGCGAD---ELIDLIMRCVLDPG----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL  205 (422)
Q Consensus       133 ~lr~~la~~~~~~~~~i~~~~G~~---~al~~~~~~l~~~g----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~  205 (422)
                      +|++.+++.-|.+.-....-+|++   .++..+-..+...|    ...+++...+......+.++|.++++|..+.+..+
T Consensus       586 ~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV~~~~~G~i  665 (1001)
T KOG2040|consen  586 ELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPVGCDANGNI  665 (1001)
T ss_pred             HHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEeeccCCCCc
Confidence            344444444465433333333432   23333333333344    23456777787777788889999999998888899


Q ss_pred             CHHHHHHHhhc--CCCeEEEEeCCCCccCcC-CCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccC
Q 014594          206 NVELIADAVER--EKPKCIFLTSPNNPDGSI-INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (422)
Q Consensus       206 d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~-~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~  281 (422)
                      |..+|.+...+  ++-.++.++.|+. .|+. -..+++.++... |.-|..|.+-..-.-   .+...++.+.++.=--+
T Consensus       666 d~~dLk~kaekh~~~Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqV---Glc~pGd~GaDV~HLNL  741 (1001)
T KOG2040|consen  666 DMVDLKAKAEKHKDNLAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDGANMNAQV---GLCRPGDIGADVCHLNL  741 (1001)
T ss_pred             cHHHHHHHHHHhhhhhheeEEecccc-cccccccHHHHHHHHHhcCCEEEecCCCcccee---cccCCccccccceeecc
Confidence            99999988754  4567888888876 3433 345666666555 889999987542110   01111123333333346


Q ss_pred             hhhhccc----cccceeeecCHHHHHHHHHhc------------------CCCCCcH-HHH-HHHHHHccCChHHHHHHH
Q 014594          282 SKRAGLA----GLRVGYGAFPLSIIEYLWRAK------------------QPYNVSV-AAE-VAACAALQNPIYLEVKEA  337 (422)
Q Consensus       282 SK~~~~~----G~r~G~i~~~~~~~~~l~~~~------------------~~~~~~~-~~~-~aa~~~L~~~~~~~~~~~  337 (422)
                      .|.|++|    |-.+|=+.+...+...+-...                  .||+.+. +.. .+-...+...+..+.-+.
T Consensus       742 HKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~  821 (1001)
T KOG2040|consen  742 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKI  821 (1001)
T ss_pred             cceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHHHHHHHhcccccchhhHH
Confidence            6776543    233444444444443332100                  1222111 111 111122222222222223


Q ss_pred             HHHHHHHHHHHHccCCCCcccCCCce----EEEEEeC-----CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecCh
Q 014594          338 LIKERERLFKLLKDVPFLNPYPSYSN----FILCEVT-----SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKP  408 (422)
Q Consensus       338 ~~~~~~~l~~~L~~~~~~~~~p~~~~----f~~~~~~-----~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~  408 (422)
                      ..-+..++.++|+..=-+......+.    |+ +++.     .+.++.+++++|.++|.-.-.-++ ...+.+-|-....
T Consensus       822 AiLNaNYMakRLe~hYkil~~~~~~~vaHEFI-lD~r~fK~~agieavDvAKRL~DYgFHaPTmsw-PV~gtLMIEPTES  899 (1001)
T KOG2040|consen  822 AILNANYMAKRLESHYKILFRGENGLVAHEFI-LDLRPFKKTAGIEAVDVAKRLMDYGFHAPTMSW-PVAGTLMIEPTES  899 (1001)
T ss_pred             HhhhhHHHHHHHhhccceeEecCCcceeeeee-eechhhccccCCcHHHHHHHHHhccCCCCcccc-ccCCceEeccCcc
Confidence            34466778888876421222222221    22 2332     367899999999999976544433 3456777776654


Q ss_pred             hhHHHHHHHH
Q 014594          409 EHTDALMECL  418 (422)
Q Consensus       409 ~~~~~l~~al  418 (422)
                      ++.+++++.+
T Consensus       900 E~k~ElDRfc  909 (1001)
T KOG2040|consen  900 EDKAELDRFC  909 (1001)
T ss_pred             ccHHHHHHHH
Confidence            4444444433

>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]

Probab=97.51  E-value=0.062  Score=52.14  Aligned_cols=85  Identities=14%  Similarity=0.214  Sum_probs=63.5

Q ss_pred             EEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCe----EEEEeCCCCccCcC--CCHHHHHHHHcC
Q 014594          173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPK----CIFLTSPNNPDGSI--INDEDLLKILEM  246 (422)
Q Consensus       173 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~----~i~l~~p~NPtG~~--~~~e~l~~i~~~  246 (422)
                      +.+++-++......+...|+++..++.+.+++++.+.|++++.++..+    .+++.+... ||.+  -.++++..+++.
T Consensus       185 ~Y~SDqahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GT-T~~ca~D~l~elg~Vc~~  263 (511)
T KOG0628|consen  185 AYCSDQAHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGT-TSSCAFDELEELGPVCRE  263 (511)
T ss_pred             EEecCcccchHHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecC-ccccccccHHHhcchhhh
Confidence            456777888899999899999999998889999999999999753322    333333322 3332  356777777776


Q ss_pred             -CCeEEEccCCcc
Q 014594          247 -PILVVLDEAYTE  258 (422)
Q Consensus       247 -~~~li~Deay~~  258 (422)
                       |+|+.+|.+|++
T Consensus       264 ~glWLHVDAAYAG  276 (511)
T KOG0628|consen  264 EGLWLHVDAAYAG  276 (511)
T ss_pred             cCEEEEeehhhcc
Confidence             999999999995

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=96.89  E-value=0.44  Score=48.41  Aligned_cols=263  Identities=16%  Similarity=0.176  Sum_probs=144.6

Q ss_pred             HHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHH----HcCCEEEEecCCCCCCCCHH
Q 014594          134 LRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKSDFSLNVE  208 (422)
Q Consensus       134 lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~d~~  208 (422)
                      +...++++-|++-.+.-+---+|.+-+++..+. ..++.+.++...+|+-.....+    .+|++++..        |++
T Consensus       168 yQTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~--------~~~  239 (1001)
T KOG2040|consen  168 YQTMITDLTGLPMANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVS--------DIK  239 (1001)
T ss_pred             hHHhhhhccCCcccchhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEec--------CHH
Confidence            445566666776555443333344444333322 4566778888889975544433    234443322        233


Q ss_pred             HHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcc
Q 014594          209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL  287 (422)
Q Consensus       209 ~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~  287 (422)
                      +.....  .+...+++..|.. .|.+.+.+++.++++. +.++++-.--..+    ..+......+.+|.++|-.. ||+
T Consensus       240 ~~~~s~--~~v~gvlvQYP~t-~G~i~d~~el~~~a~~~~s~vv~atDLLaL----tiLrpPgefGaDIavGSsQR-FGV  311 (1001)
T KOG2040|consen  240 EADYSS--KDVSGVLVQYPDT-EGSVLDFDELVELAHANGSLVVMATDLLAL----TILRPPGEFGADIAVGSSQR-FGV  311 (1001)
T ss_pred             Hhhccc--cceeEEEEEcCCC-CCcccCHHHHHHHhhccCceEEEeehhhHH----HccCChhhcCceeeeccccc-cCc
Confidence            322222  3567788777776 8999999999999998 5554432111111    12222335566788888554 544


Q ss_pred             c----cccceeeecCHHHHHHH---------------------HHh-------cCCCCCcH-----HHHHHHHHHccCCh
Q 014594          288 A----GLRVGYGAFPLSIIEYL---------------------WRA-------KQPYNVSV-----AAEVAACAALQNPI  330 (422)
Q Consensus       288 ~----G~r~G~i~~~~~~~~~l---------------------~~~-------~~~~~~~~-----~~~~aa~~~L~~~~  330 (422)
                      |    |-..||+.+.+++.+.+                     +..       +...+.-+     ....|..+.+..+.
T Consensus       312 PlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~  391 (1001)
T KOG2040|consen  312 PLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPH  391 (1001)
T ss_pred             cccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcH
Confidence            3    22233333333332211                     100       00111100     11223334444566


Q ss_pred             HHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---
Q 014594          331 YLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---  406 (422)
Q Consensus       331 ~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---  406 (422)
                      .++ +.+++....-.|...|+..+.. +.. ..+|=.+++.-+.+.+++.+..++++|-++...    ++.|-+++-   
T Consensus       392 gL~~IArrvh~~T~~l~~~l~~aghe-l~~-k~fFDTLkI~~~~s~~~~l~rA~~~~iNlr~~e----d~tigvslDETv  465 (1001)
T KOG2040|consen  392 GLKEIARRVHNLTLILAEGLKNAGHE-LQH-KPFFDTLKIRCGCSAEEVLDRAAKRQINLRLVE----DGTIGVSLDETV  465 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcchh-hcc-ccccceEEEEecCcHHHHHHHHHhhcCceEEee----cCceEEeecccc
Confidence            677 8888889999999999987632 222 225534444324578999999888889998876    467777774   


Q ss_pred             ChhhHHHHHHHH
Q 014594          407 KPEHTDALMECL  418 (422)
Q Consensus       407 ~~~~~~~l~~al  418 (422)
                      +.++.+.|...+
T Consensus       466 ~~~DvddLl~vf  477 (1001)
T KOG2040|consen  466 TEKDVDDLLWVF  477 (1001)
T ss_pred             cHHHHHHHHHHH
Confidence            344455554443

>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]

Probab=96.38  E-value=0.52  Score=43.14  Aligned_cols=309  Identities=13%  Similarity=0.093  Sum_probs=162.1

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHh-cC-CC----------CCCCCCcc--hHHHHHHHHHHcCCCCC-C-EEEeCCHHH
Q 014594           94 PEDIVKIDANENPYGPPPEVREALG-QL-KF----------PYIYPDPE--SRRLRAALAKDSGLESD-H-ILVGCGADE  157 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~-~~-~~----------~~~y~~~~--~~~lr~~la~~~~~~~~-~-i~~~~G~~~  157 (422)
                      ++.+++|..|...+  |.+|+..++ ++ .+          .|+-.+..  ..+.+..+.++++++.+ . +++-.|++.
T Consensus         5 ~~~vvnFaaGPAkl--p~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~   82 (370)
T KOG2790|consen    5 PERVVNFAAGPAKL--PESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTG   82 (370)
T ss_pred             ccceeecCCCcccC--CHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcc
Confidence            35578887765444  345543333 22 11          13322221  34566677788888543 3 456667777


Q ss_pred             HHHHHHHHhc--CCC---CEEEEcCCCchhHHHHHHHcCCE-EEEecCCC-C--CCCCHHHHHHHhhcCCCeEEEEeCCC
Q 014594          158 LIDLIMRCVL--DPG---DKIVDCPPTFTMYEFDAAVNGAA-VVKVPRKS-D--FSLNVELIADAVEREKPKCIFLTSPN  228 (422)
Q Consensus       158 al~~~~~~l~--~~g---d~Vl~~~p~y~~~~~~~~~~g~~-~~~v~~~~-~--~~~d~~~l~~~i~~~~~~~i~l~~p~  228 (422)
                      -+..+...++  +.|   |-|+.-.-+--.+..+ +..|.. .+..+..+ .  --.|.+.++.   .++.+.++.|...
T Consensus        83 qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EA-kk~~~~~~V~~~~k~y~ygkvPd~~~w~~---~~da~yvyyCaNE  158 (370)
T KOG2790|consen   83 QFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEA-KKYGTPNIVIPKLKSYTYGKVPDPSTWEL---NPDASYVYYCANE  158 (370)
T ss_pred             cccccchhhhccccCCccceEEeccccHHHHHHH-HhhCCceEEeccccccccCcCCChhhccc---CCCccEEEEecCc
Confidence            7777777776  444   4455443222344444 334433 33333211 1  1244444433   2456789999777


Q ss_pred             CccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHH
Q 014594          229 NPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR  307 (422)
Q Consensus       229 NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~  307 (422)
                      ...|+-++.--   +-.- +.++|.|-.-- |...+-.     -....+++.+..|.+|.+|+  -.++.+++++.....
T Consensus       159 TVHGVEf~~~P---~~~~~~~vlVaDmSSn-flSrpvD-----vsk~gvi~aGAQKN~G~aG~--Tvvivr~dllg~~~~  227 (370)
T KOG2790|consen  159 TVHGVEFDFIP---VNDPKGAVLVADMSSN-FLSRPVD-----VSKFGVIFAGAQKNVGPAGV--TVVIVRKDLLGNALD  227 (370)
T ss_pred             eeeceecCCCC---CCCCCCceEEEecccc-hhcCCcc-----chhcceEEeccccccCcccc--EEEEEehhhhccccc
Confidence            77787764322   1122 78889987643 3222211     12223778889999998884  447778888776543


Q ss_pred             hcC-------------CCC-CcHHHHHH----HHHHccCChHHHHHHHHHHHHHHHHHHHccC-CCCc--ccCC--CceE
Q 014594          308 AKQ-------------PYN-VSVAAEVA----ACAALQNPIYLEVKEALIKERERLFKLLKDV-PFLN--PYPS--YSNF  364 (422)
Q Consensus       308 ~~~-------------~~~-~~~~~~~a----a~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~--~~p~--~~~f  364 (422)
                      ...             .|+ ++.++.++    ....++.+....+.+.-.+..+.+.+.+.+. ++..  +.|.  .-+-
T Consensus       228 ~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~~RS~MN  307 (370)
T KOG2790|consen  228 ITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPSVRSRMN  307 (370)
T ss_pred             CCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeEEcccchhhhhhcc
Confidence            321             122 23233222    2233333333336666677788899999875 4332  1221  2245


Q ss_pred             EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          365 ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       365 ~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      +.+++.+..-.++|.....+++..-.-|.  .--|.||-|+-   +.++.+.|...++.+
T Consensus       308 V~Fri~~d~Le~eFLkeA~~~~mv~LKGh--RSVGGiRASlYNAisv~~~q~L~~~m~~F  365 (370)
T KOG2790|consen  308 VPFRIEKDELEAEFLKEAAKEHMVQLKGH--RSVGGIRASLYNAISVEEVQKLAAFMKEF  365 (370)
T ss_pred             cceeecchHHHHHHHHHHHHhhhhccccc--cccccchhhhhccccHHHHHHHHHHHHHH
Confidence            66676433234455555544443222221  22467898863   344556666666543

>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]

Probab=91.92  E-value=1.7  Score=39.36  Aligned_cols=149  Identities=13%  Similarity=0.089  Sum_probs=81.2

Q ss_pred             HHHHHHHHhc--CCCCE-EEEcCCCchhHHHHHHHcCCEEEEec--C-CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCcc
Q 014594          158 LIDLIMRCVL--DPGDK-IVDCPPTFTMYEFDAAVNGAAVVKVP--R-KSDFSLNVELIADAVEREKPKCIFLTSPNNPD  231 (422)
Q Consensus       158 al~~~~~~l~--~~gd~-Vl~~~p~y~~~~~~~~~~g~~~~~v~--~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt  231 (422)
                      .+.+.+..+.  +|..+ |+-..-.--......-.+|.+++.+.  . .+..--|++.+++.+++-+..+|+..+-.  |
T Consensus        88 slslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~st--t  165 (432)
T KOG3843|consen   88 SLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIHST--T  165 (432)
T ss_pred             cHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeec--c
Confidence            4555555553  34433 44333222222223334788888776  2 23345689999999987677766543322  2


Q ss_pred             CcCC-----CHHHHHHHHcC-CCeEEEccCCccccCCC-chhhhhhc-CCcEEEEccChhhhccccccceeee--cCHHH
Q 014594          232 GSII-----NDEDLLKILEM-PILVVLDEAYTEFSGLE-SRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGA--FPLSI  301 (422)
Q Consensus       232 G~~~-----~~e~l~~i~~~-~~~li~Deay~~~~~~~-~~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~--~~~~~  301 (422)
                      ....     ..|++..|+.. ++.-|+..+|.--...- ..+..... .....++.|+-|.|..|=  .|.++  .+..+
T Consensus       166 scfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~~~grida~vqsldknf~vpv--ggaiia~fk~n~  243 (432)
T KOG3843|consen  166 SCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAAECGRIDAFVQSLDKNFMVPV--GGAIIAAFKDNF  243 (432)
T ss_pred             cccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHHhhhccHHHHHHHhhhcceeec--chhHhhHhHHHH
Confidence            2222     34566666655 88889999997322100 11111111 222357889999997652  23333  26778


Q ss_pred             HHHHHHhcC
Q 014594          302 IEYLWRAKQ  310 (422)
Q Consensus       302 ~~~l~~~~~  310 (422)
                      ++.+.+...
T Consensus       244 iq~iak~yp  252 (432)
T KOG3843|consen  244 IQEIAKMYP  252 (432)
T ss_pred             HHHHHHhCC
Confidence            887776543

>PLN02672 methionine S-methyltransferase

Probab=86.66  E-value=7.4  Score=43.21  Aligned_cols=168  Identities=17%  Similarity=0.216  Sum_probs=97.5

Q ss_pred             CCcchHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHHHHHHh------cCCCCEEEEcCCCchhHHHHHHHcC---
Q 014594          127 PDPESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCV------LDPGDKIVDCPPTFTMYEFDAAVNG---  191 (422)
Q Consensus       127 ~~~~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al~~~~~~l------~~~gd~Vl~~~p~y~~~~~~~~~~g---  191 (422)
                      |..|...+|..++.++    +  +.+++|++-++-..|++.+++.+      ++.+.+-.++ +.|   .......|   
T Consensus       424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~  499 (1082)
T PLN02672        424 PPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP-KKW---LTSLAIENATS  499 (1082)
T ss_pred             CCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCC-HHH---HhHhhhhcccc
Confidence            4458899999999885    3  57899999999999999999843      2222111111 122   11111122   


Q ss_pred             -------CEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHc---C-CCeEEEccCC-ccc
Q 014594          192 -------AAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE---M-PILVVLDEAY-TEF  259 (422)
Q Consensus       192 -------~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~---~-~~~li~Deay-~~~  259 (422)
                             ++|+.-|.    .-  +.+.+.+++-++++++..-..   +-..+...++.|.+   . |.+++.|..- .++
T Consensus       500 ~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  570 (1082)
T PLN02672        500 DSKSDDVITVIEAPR----QS--DLVIELIKKLKPQVVVTGMAD---FEMRTSTAFEHLLNVTAEIGARLFLDISDHLEL  570 (1082)
T ss_pred             cCccCCeEEEEeCCC----cc--hHHHHHHHhCCCeEEEEeccc---hhhhhHHHHHHHHHHHHhhCcEEEEehhhheee
Confidence                   22333332    22  366677776788988865332   22233334444433   3 9999999863 334


Q ss_pred             cCCCc---hhhhhh---cCCcEEEEccChhhhccccccceeeec-CHHHHHHHHH
Q 014594          260 SGLES---RMEWVK---KHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWR  307 (422)
Q Consensus       260 ~~~~~---~~~~~~---~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~~~l~~  307 (422)
                      ...++   .+..+.   ...+..++.++-|.--.+.+.+.+++. +..+.+.+.+
T Consensus       571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  625 (1082)
T PLN02672        571 SSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVISENEAVLKALSK  625 (1082)
T ss_pred             ccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEecCcHHHHHHHHH
Confidence            33221   222221   234556667787775568899999886 4455555554

>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]

Probab=80.16  E-value=34  Score=30.50  Aligned_cols=154  Identities=19%  Similarity=0.252  Sum_probs=88.7

Q ss_pred             EEEeCCHHHHHHHHHHHhcCCCCEEE----E-c-CC-Cc-------hhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHh
Q 014594          149 ILVGCGADELIDLIMRCVLDPGDKIV----D-C-PP-TF-------TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAV  214 (422)
Q Consensus       149 i~~~~G~~~al~~~~~~l~~~gd~Vl----~-~-~p-~y-------~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i  214 (422)
                      +.+-+|+.....++..++ +.|..|.    + + ++ +|       ......++..|..++.........-..++|.+++
T Consensus         4 ~aL~SGGKDS~~Al~~a~-~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~~e~eve~L~~~l   82 (223)
T COG2102           4 IALYSGGKDSFYALYLAL-EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGEEEREVEELKEAL   82 (223)
T ss_pred             EEEEecCcHHHHHHHHHH-HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCccchhhHHHHHHHH
Confidence            567788888877777654 4453331    1 1 12 12       2334566778999888886543445678888888


Q ss_pred             hcCCCeEEEEeCCCCccCcCCCHHHHHH---HHcC-CCeEEEccCCccccCCCc--hhhhhhcCCcEEEEccChhhhccc
Q 014594          215 EREKPKCIFLTSPNNPDGSIINDEDLLK---ILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLA  288 (422)
Q Consensus       215 ~~~~~~~i~l~~p~NPtG~~~~~e~l~~---i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~~~S~SK~~~~~  288 (422)
                      ..-+...|+       +|.+++..+..+   +|+. |+.+     |.++...++  .+...-..+--+.+-+-+| .|++
T Consensus        83 ~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~-----~~PLWg~d~~ell~e~~~~Gf~~~Iv~Vsa-~gL~  149 (223)
T COG2102          83 RRLKVDGIV-------AGAIASEYQKERVERLCEELGLKV-----YAPLWGRDPEELLEEMVEAGFEAIIVAVSA-EGLD  149 (223)
T ss_pred             HhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEE-----eecccCCCHHHHHHHHHHcCCeEEEEEEec-cCCC
Confidence            766677888       899998877655   5655 7643     455554332  1211112222233334444 4444


Q ss_pred             cccceeeecCHHHHHHHHHhcCCCCCcHH
Q 014594          289 GLRVGYGAFPLSIIEYLWRAKQPYNVSVA  317 (422)
Q Consensus       289 G~r~G~i~~~~~~~~~l~~~~~~~~~~~~  317 (422)
                      ..=+|.- .+.+.++.+......|++++.
T Consensus       150 ~~~lGr~-i~~~~~e~l~~l~~~ygi~~~  177 (223)
T COG2102         150 ESWLGRR-IDREFLEELKSLNRRYGIHPA  177 (223)
T ss_pred             hHHhCCc-cCHHHHHHHHHHHHhcCCCcc
Confidence            3223332 377888888777665655543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	422
1gew_A	356	Crystal Structure Of Histidinol-Phosphate Aminotran		9e-35
1fg3_A	356	Crystal Structure Of L-Histidinol Phosphate Aminotr		9e-34
3ffh_A	363	The Crystal Structure Of Histidinol-phosphate Amino		2e-33
3get_A	365	Crystal Structure Of Putative Histidinol-Phosphate		2e-30
3euc_A	367	Crystal Structure Of Histidinol-Phosphate Aminotran		6e-30
3hdo_A	360	Crystal Structure Of A Histidinol-Phosphate Aminotr		1e-26
3cq5_A	369	Histidinol-Phosphate Aminotransferase From Coryneba		4e-26
3cq4_A	376	Histidinol-Phosphate Aminotransferase From Coryneba		4e-26
1uu1_A	335	Complex Of Histidinol-Phosphate Aminotransferase (H		6e-26
2f8j_A	347	Crystal Structure Of Histidinol-phosphate Aminotran		7e-26
3cq6_A	369	Histidinol-Phosphate Aminotransferase From Coryneba		2e-25
1h1c_A	335	Histidinol-Phosphate Aminotransferase (Hisc) From T		5e-23
3ftb_A	361	The Crystal Structure Of The Histidinol-Phosphate A		6e-22
1lkc_A	364	Crystal Structure Of L-Threonine-O-3-Phosphate Deca		1e-16
3p1t_A	337	Crystal Structure Of A Putative Aminotransferase (B		2e-14
1gde_A	389	Crystal Structure Of Pyrococcus Protein A-1 E-form		5e-13
1dju_A	388	Crystal Structure Of Aromatic Aminotransferase From		5e-13
3ly1_A	354	Crystal Structure Of Putative Histidinol-Phosphate		5e-12
3fkd_A	350	The Crystal Structure Of L-Threonine-O-3-Phosphate		9e-12
1o4s_A	389	Crystal Structure Of Aspartate Aminotransferase (Tm		3e-11
5bj3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		3e-10
1gc3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		6e-10
3ele_A	398	Crystal Structure Of Amino Transferase (rer07020700		9e-10
1v2d_A	381	Crystal Structure Of T.Th Hb8 Glutamine Aminotransf		1e-09
1gck_A	385	Thermus Thermophilus Aspartate Aminotransferase Dou		1e-09
1b5o_A	385	Thermus Thermophilus Aspartate Aminotransferase Sin		2e-09
1bkg_A	385	Aspartate Aminotransferase From Thermus Thermophilu		2e-09
1bjw_A	382	Aspartate Aminotransferase From Thermus Thermophilu		8e-09
1j32_A	388	Aspartate Aminotransferase From Phormidium Lapideum		2e-08
2gb3_A	409	Crystal Structure Of Aspartate Aminotransferase (Tm		3e-08
2o0r_A	411	The Three-Dimensional Structure Of N-Succinyldiamin		4e-08
2egy_A	397	Crystal Structure Of Lysn, Alpha-Aminoadipate Amino		6e-08
2x5d_A	412	Crystal Structure Of A Probable Aminotransferase Fr		2e-07
3jtx_A	396	Crystal Structure Of Aminotransferase (np_283882.1)		8e-07
1u08_A	386	Crystal Structure And Reactivity Of Ybdl From Esche		9e-07
3aov_A	448	Crystal Structure Of Pyrococcus Horikoshii Kynureni		1e-06
1x0m_A	403	A Human Kynurenine Aminotransferase Ii Homologue Fr		1e-06
1xi9_A	406	Alanine Aminotransferase From Pyrococcus Furiosus P		2e-06
3b46_A	447	Crystal Structure Of Bna3p, A Putative Kynurenine A		2e-06
2zc0_A	407	Crystal Structure Of An Archaeal Alanine:glyoxylate		2e-06
2z61_A	370	Crystal Structure Of Mj0684 From Methanococcus Jann		3e-06
3e2z_B	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		4e-06
3dyd_A	427	Human Tyrosine Aminotransferase Length = 427		6e-06
3op7_A	375	Crystal Structure Of A Plp-Dependent Aminotransfera		6e-06
3asa_A	400	Crystal Structure Of Apo-Ll-Diaminopimelate Aminotr		1e-05
3e2f_A	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		1e-05
1iax_A	428	Crystal Structure Of Acc Synthase Complexed With Pl		1e-05
4fl0_A	456	Crystal Structure Of Ald1 From Arabidopsis Thaliana		2e-05
3pdx_A	402	Crystal Structural Of Mouse Tyrosine Aminotransfera		3e-05
2o1b_A	404	Structure Of Aminotransferase From Staphylococcus A		3e-05
3ezs_A	376	Crystal Structure Of Aminotransferase Aspb (Np_2074		1e-04
2z20_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		3e-04
2z1z_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		4e-04

>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase Complexed With Pyridoxal 5'-Phosphate Length = 356

Iteration: 1
 Score =  144 bits (363), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 179/367 (48%), Gaps = 28/367 (7%)
Query: 61  LTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL 120
           +T     R ++R L PYQ        + +LG   +  V ++ANE P      V   L Q 
Sbjct: 4   VTITDLARENVRNLTPYQS-------ARRLGGNGD--VWLNANEYPTA----VEFQLTQQ 50
Query: 121 KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPT 179
                YP+ + + +    A+ +G++ + +LV  GADE I+L++R   +PG D I+ CPPT
Sbjct: 51  TLNR-YPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPT 109
Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           + MY   A   G     VP   ++ L+++ I+D ++    K +++ SPNNP G +IN +D
Sbjct: 110 YGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQD 167
Query: 240 LLKILEMP---ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296
              +LE+     +VV DEAY EF    S   W+ ++ +L +LRT SK   LAGLR G+  
Sbjct: 168 FRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTL 227
Query: 297 FPLSIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYLEVKE---ALIKERERLFKLLKDVP 353
               +I  L +   PY             L     + ++E    +I ERE L   LK++P
Sbjct: 228 ANEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIP 287
Query: 354 FLNP-YPSYSNFILCEVTSGMXXXXXXXXXXXMGVMIRHYNNK-ELKGYVRVSVGKPEHT 411
            +   + S +N+IL    +              G+++R  N +  L G +R++VG  E +
Sbjct: 288 CVEQVFDSETNYILARFKAS---SAVFKSLWDQGIILRDQNKQPSLSGCLRITVGTREES 344
Query: 412 DALMECL 418
             +++ L
Sbjct: 345 QRVIDAL 351

>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate Aminotransferase Complexed With L-Histidinol Length = 356

Iteration: 1
 Score =  140 bits (354), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 177/367 (48%), Gaps = 28/367 (7%)
Query: 61  LTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL 120
           +T     R ++R L PYQ        + +LG   +  V ++ANE P      V   L Q 
Sbjct: 4   VTITDLARENVRNLTPYQS-------ARRLGGNGD--VWLNANEYPTA----VEFQLTQQ 50
Query: 121 KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPT 179
                YP+ + + +    A+ +G++ + +LV  GADE I+L++R   +PG D I+ CPPT
Sbjct: 51  TLNR-YPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPT 109
Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           +  Y   A   G     VP   ++ L+++ I+D ++    K +++ SPNNP G +IN +D
Sbjct: 110 YGXYSVSAETIGVECRTVPTLDNWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQD 167
Query: 240 LLKILEMP---ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296
              +LE+     +VV DEAY EF    S   W+ ++ +L +LRT SK   LAGLR G+  
Sbjct: 168 FRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTL 227
Query: 297 FPLSIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYLEVKE---ALIKERERLFKLLKDVP 353
               +I  L +   PY             L     +  +E    +I ERE L   LK++P
Sbjct: 228 ANEEVINLLXKVIAPYPLSTPVADIAAQALSPQGIVAXRERVAQIIAEREYLIAALKEIP 287
Query: 354 FLNP-YPSYSNFILCEVTSGMXXXXXXXXXXXMGVMIRHYNNK-ELKGYVRVSVGKPEHT 411
            +   + S +N+IL    +              G+++R  N +  L G +R++VG  E +
Sbjct: 288 CVEQVFDSETNYILARFKAS---SAVFKSLWDQGIILRDQNKQPSLSGCLRITVGTREES 344
Query: 412 DALMECL 418
             +++ L
Sbjct: 345 QRVIDAL 351

>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate Aminotransferase From Listeria Innocua Clip11262. Length = 363

Iteration: 1
 Score =  140 bits (352), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 169/364 (46%), Gaps = 18/364 (4%)
Query: 68  RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPY-IY 126
           +  L  L  Y+P    E +  +LG     I K+ +NENP G   +V            IY
Sbjct: 7   KKSLAGLSSYKPGKREEEVXAELGLTK--ITKLSSNENPLGTSKKVAAIQANSSVETEIY 64
Query: 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           PD  +  LR  +A    LE + ++   G DELI+L+ R +LD     V   PTF  Y  +
Sbjct: 65  PDGWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYRQN 124
Query: 187 AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE- 245
           A + GA V ++P   D   ++E   +A++ EK   +++ +PNNP G+ I   D+   L+ 
Sbjct: 125 ALIEGAEVREIPLLQDGEHDLEGXLNAID-EKTTIVWICNPNNPTGNYIELADIQAFLDR 183
Query: 246 --MPILVVLDEAYTEFSG--LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301
               +LVVLDEAY E+     E   + V+ + NLI+ RTFSK  GLA  RVGYG     I
Sbjct: 184 VPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEI 243
Query: 302 IEYLWRAKQPYNXXXXXXXXXXXXLQNPIYL-EVKEA---LIKERERLFKLLKDVPFLNP 357
           I  L   + P+N            +++  ++ E + +    IK+ E   K  + V     
Sbjct: 244 IRQLNIVRPPFNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKL--- 300
Query: 358 YPSYSNFILCEVTSGMXXXXXXXXXXXMGVMIRHYNNKELKGYVRVSVGKPEHTDALMEC 417
           YP+  NF+L ++  G+            G + R          VR+++GK E   A++  
Sbjct: 301 YPANGNFVLIDL--GIEAGTIFSYLEKNGYITRSGAALGFPTAVRITIGKEEDNSAVIAL 358
Query: 418 LMHL 421
           L  L
Sbjct: 359 LEKL 362

>pdb|3GET|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate Aminotransferase (Np_281508.1) From Campylobacter Jejuni At 2.01 A Resolution Length = 365

Iteration: 1
 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 133/255 (52%), Gaps = 17/255 (6%)
Query: 71  LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP 129
           L  L  Y+P    EV++ + G K  +++K+ +NENP+G PP+  E L Q     ++YPD 
Sbjct: 8   LNNLSNYEPGKDIEVIAKEYGVK--EVIKLASNENPFGTPPKAIECLRQNANKAHLYPDD 65
Query: 130 ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV 189
               L++ LA+   +++++I++G G+D++I+  +   L+  +  +    TF  YE  A  
Sbjct: 66  SXIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAXYEIYAKQ 125
Query: 190 NGAAVVKVPRKSDFSLNVELIADAVEREKP--KCIFLTSPNNPDGSIINDED---LLKIL 244
            GA   K  +    + N++      E  K   K IFL  PNNP G  ++  +    +K +
Sbjct: 126 CGA---KCYKTQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGV 182
Query: 245 EMPILVVLDEAYTEFSGLESR------MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
               LVV+D AY EF+  +         E +K+ DN++ L TFS   GL GLR+GYG   
Sbjct: 183 NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSXLYGLGGLRIGYGIAN 242
Query: 299 LSIIEYLWRAKQPYN 313
            +II   ++ + P+N
Sbjct: 243 ANIISAFYKLRAPFN 257

>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase (Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A Resolution Length = 367

Iteration: 1
 Score =  128 bits (322), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 155/336 (46%), Gaps = 20/336 (5%)
Query: 97  IVKIDANENPYGPPPEVREAL----GQLKFPYIYPDPESRRLRAALAKDSGLESD-HILV 151
           +VK+DA ENPY  PP +R  L    G++     YP P S  LRA L +   + +   +L+
Sbjct: 32  LVKLDAXENPYRLPPALRSELAARLGEVALNR-YPVPSSEALRAKLKEVXQVPAGXEVLL 90
Query: 152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIA 211
           G G+DE+I  +      PG K+    P F  Y   A   G   V VP ++DF+L+     
Sbjct: 91  GNGSDEIISXLALAAARPGAKVXAPVPGFVXYAXSAQFAGLEFVGVPLRADFTLDRGAXL 150
Query: 212 DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP------ILVVLDEAYTEFSGLESR 265
            A    +P  ++L  PNNP G++ +  D   I+          LVV+DEAY  F+  ES 
Sbjct: 151 AAXAEHQPAIVYLAYPNNPTGNLFDAADXEAIVRAAQGSVCRSLVVVDEAYQPFAQ-ESW 209
Query: 266 MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXX 325
              +    NL+V RT SK  GLAG+R+GY A     +E L + + PYN            
Sbjct: 210 XSRLTDFGNLLVXRTVSKL-GLAGIRLGYVAGDPQWLEQLDKVRPPYNVNVLTEATALFA 268
Query: 326 LQNPIYLEVKEALIK-ERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMXXXXXXXXXXX 384
           L++   L+ + A ++ ER R+ +       +  +PS +NF+L  V               
Sbjct: 269 LEHVAVLDEQAAQLRAERSRVAEGXAAHGGVTVFPSAANFLLARVPDAAQTFDRLLARK- 327
Query: 385 MGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECL 418
             V+I++ +     L   +RV+V  PE     +E  
Sbjct: 328 --VLIKNVSKXHPLLANCLRVTVSTPEENAQFLEAF 361

>pdb|3HDO|A Chain A, Crystal Structure Of A Histidinol-Phosphate Aminotransferase From Geobacter Metallireducens Length = 360

Iteration: 1
 Score =  117 bits (294), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 34/349 (9%)
Query: 91  GRKPEDI---VKIDANENPYGPPPEVREALGQLKFP-----YIYPDPESRRLRAALAKDS 142
           G +P DI   +K++ NENPY P PEV +A+ +   P      IYP   S++LR    +  
Sbjct: 19  GYQPPDIASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSASSQKLREVAGELY 78
Query: 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD 202
           G +   I+   G+DE+++ ++R     G++I    P+++ Y   A V GA V       D
Sbjct: 79  GFDPSWIIXANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGD 138
Query: 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE-MPILVVLDEAYTEFSG 261
           F      IA   ER + K  FLT+PN P G     E + ++       +VLDE Y EF+ 
Sbjct: 139 FR-----IAGFPERYEGKVFFLTTPNAPLGPSFPLEYIDELARRCAGXLVLDETYAEFAE 193
Query: 262 LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXX 321
             + +E V++H+N++V RT SK   LAG R+G       +I  L + +  YN        
Sbjct: 194 -SNALELVRRHENVVVTRTLSKSYSLAGXRIGLAIARPEVIAALDKIRDHYNLDRLAQAA 252
Query: 322 XXXXLQNPIYLEVKEALIKE-RERLFKLLKDVPFLNPYPSYSNFILC--------EVTSG 372
               L++  YL      I+E RE     L+ + + +  PS  N++           V  G
Sbjct: 253 CVAALRDQAYLSECCRRIRETREWFTTELRSIGY-DVIPSQGNYLFATPPDRDGKRVYDG 311
Query: 373 MXXXXXXXXXXXMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 421
           +             V++RH+++  L    R+S+G  E  +  +  L  +
Sbjct: 312 LYARK---------VLVRHFSDPLLAHGXRISIGTREEXEQTLAALKEI 351

>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum In Complex With Pmp Length = 369

Iteration: 1
 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 163/335 (48%), Gaps = 22/335 (6%)
Query: 98  VKIDANENPYGPPPEVREALGQLKFPYI------YPDPESRRLRAALA----KDSGLE-- 145
           ++++ NENPY PP E   A        I      YP+ ++  LR  LA    K +G+   
Sbjct: 33  IRLNTNENPY-PPSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVT 91
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL 205
            D++    G++E++  +++    PG   +   P+++M+   A       + V R +DF +
Sbjct: 92  RDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRI 151
Query: 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES 264
           ++++  + +  ++P  +F+T+PNNP G + + +D+ +I+ + P +V++DEAY EFS   S
Sbjct: 152 DMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPS 211
Query: 265 RMEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXX 323
               ++K+   L+V RT SK    AG R+GY     + I+ +   + PY+          
Sbjct: 212 ATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPYHLSALSQAAAI 271
Query: 324 XXLQNPI-YLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMXXXXXXXXX 382
             L++    L   E L  ER R+   L+++ +    PS SNF+     S           
Sbjct: 272 VALRHSADTLGTVEKLSVERVRVAARLEELGYA-VVPSESNFVFFGDFSDQHAAWQAFLD 330
Query: 383 XXMGVMIRHYNNKELKGYVRVSVGKPEHTDALMEC 417
              GV+IR      + G++R ++G PE  DA ++ 
Sbjct: 331 R--GVLIRDVG---IAGHLRTTIGVPEENDAFLDA 360

>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum Length = 376

Iteration: 1
 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 163/335 (48%), Gaps = 22/335 (6%)
Query: 98  VKIDANENPYGPPPEVREALGQLKFPYI------YPDPESRRLRAALA----KDSGLE-- 145
           ++++ NENPY PP E   A        I      YP+ ++  LR  LA    K +G+   
Sbjct: 30  IRLNTNENPY-PPSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVT 88
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL 205
            D++    G++E++  +++    PG   +   P+++M+   A       + V R +DF +
Sbjct: 89  RDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRI 148
Query: 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES 264
           ++++  + +  ++P  +F+T+PNNP G + + +D+ +I+ + P +V++DEAY EFS   S
Sbjct: 149 DMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPS 208
Query: 265 RMEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXX 323
               ++K+   L+V RT SK    AG R+GY     + I+ +   + PY+          
Sbjct: 209 ATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPYHLSALSQAAAI 268
Query: 324 XXLQNPI-YLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMXXXXXXXXX 382
             L++    L   E L  ER R+   L+++ +    PS SNF+     S           
Sbjct: 269 VALRHSADTLGTVEKLSVERVRVAARLEELGYA-VVPSESNFVFFGDFSDQHAAWQAFLD 327
Query: 383 XXMGVMIRHYNNKELKGYVRVSVGKPEHTDALMEC 417
              GV+IR      + G++R ++G PE  DA ++ 
Sbjct: 328 R--GVLIRDVG---IAGHLRTTIGVPEENDAFLDA 357

>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc) From Thermotoga Maritima (Apo-Form) Length = 335

Iteration: 1
 Score =  115 bits (287), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 150/323 (46%), Gaps = 25/323 (7%)
Query: 103 NENPYGPPPEVREALGQ------LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGAD 156
           NENP+  P ++ + + +      L+  Y  PD E      +      L  +++ VG GAD
Sbjct: 27  NENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGAD 86
Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER 216
           E+I ++M       D+ V  PPT++ Y   A   GA  ++VP   D  +        V  
Sbjct: 87  EIIYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRI------PEVNV 136
Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLI 276
            +   +F+ +PNNP G +   E++ +IL+    V LDEAY EF G ES ++++KK++NL 
Sbjct: 137 GEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHG-ESYVDFLKKYENLA 195
Query: 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXXLQN-PIYLEVK 335
           V+RTFSK   LA  RVGY       I+   R + P+N            L +  I+ E  
Sbjct: 196 VIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERT 255
Query: 336 EALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMXXXXXXXXXXXMGVMIRHYNNK 395
           + +++ERER+   L+++ +     S  NF+                     V +R +   
Sbjct: 256 KFIVEERERMKSALREMGY-RITDSRGNFVFV-FMEKEEKERLLEHLRTKNVAVRSFREG 313
Query: 396 ELKGYVRVSVGKPEHTDALMECL 418
                VR+++GK E  D ++  L
Sbjct: 314 -----VRITIGKREENDMILREL 331

>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase (ec 2.6.1.9) (imidazole Acetol-phosphate Transferase) (tm1040) From Thermotoga Maritima At 2.40 A Resolution Length = 347

Iteration: 1
 Score =  115 bits (287), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 150/323 (46%), Gaps = 25/323 (7%)
Query: 103 NENPYGPPPEVREALGQ------LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGAD 156
           NENP+  P ++ + + +      L+  Y  PD E      +      L  +++ VG GAD
Sbjct: 39  NENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGAD 98
Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER 216
           E+I ++M       D+ V  PPT++ Y   A   GA  ++VP   D  +        V  
Sbjct: 99  EIIYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRI------PEVNV 148
Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLI 276
            +   +F+ +PNNP G +   E++ +IL+    V LDEAY EF G ES ++++KK++NL 
Sbjct: 149 GEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHG-ESYVDFLKKYENLA 207
Query: 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXXLQN-PIYLEVK 335
           V+RTFSK   LA  RVGY       I+   R + P+N            L +  I+ E  
Sbjct: 208 VIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERT 267
Query: 336 EALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMXXXXXXXXXXXMGVMIRHYNNK 395
           + +++ERER+   L+++ +     S  NF+                     V +R +   
Sbjct: 268 KFIVEERERMKSALREMGY-RITDSRGNFVFV-FMEKEEKERLLEHLRTKNVAVRSFREG 325
Query: 396 ELKGYVRVSVGKPEHTDALMECL 418
                VR+++GK E  D ++  L
Sbjct: 326 -----VRITIGKREENDMILREL 343

>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum Holo-Form (Plp Covalently Bound ) Length = 369

Iteration: 1
 Score =  113 bits (283), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 162/335 (48%), Gaps = 22/335 (6%)
Query: 98  VKIDANENPYGPPPEVREALGQLKFPYI------YPDPESRRLRAALA----KDSGLE-- 145
           ++++ NENPY PP E   A        I      YP+ ++  LR  LA    K +G+   
Sbjct: 33  IRLNTNENPY-PPSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVT 91
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL 205
            D++    G++E++  +++    PG   +   P+++M+   A       + V R +DF +
Sbjct: 92  RDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRI 151
Query: 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES 264
           ++++  + +  ++P  +F+T+PNNP G + + +D+ +I+ + P +V++DEAY EFS   S
Sbjct: 152 DMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPS 211
Query: 265 RMEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXX 323
               ++K+   L+V RT S     AG R+GY     + I+ +   + PY+          
Sbjct: 212 ATTLLEKYPTKLVVSRTMSXAFDFAGGRLGYFVANPAFIDAVMLVRLPYHLSALSQAAAI 271
Query: 324 XXLQNPI-YLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMXXXXXXXXX 382
             L++    L   E L  ER R+   L+++ +    PS SNF+     S           
Sbjct: 272 VALRHSADTLGTVEKLSVERVRVAARLEELGYA-VVPSESNFVFFGDFSDQHAAWQAFLD 330
Query: 383 XXMGVMIRHYNNKELKGYVRVSVGKPEHTDALMEC 417
              GV+IR      + G++R ++G PE  DA ++ 
Sbjct: 331 R--GVLIRDVG---IAGHLRTTIGVPEENDAFLDA 360

>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From Thermotoga Maritima Length = 335

Iteration: 1
 Score =  105 bits (262), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 126/256 (49%), Gaps = 18/256 (7%)
Query: 103 NENPYGPPPEVREALGQ------LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGAD 156
           NENP+  P ++ + + +      L+  Y  PD E      +      L  +++ VG GAD
Sbjct: 27  NENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGAD 86
Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER 216
           E+I +         D+ V  PPT++ Y   A   GA  ++VP   D  +    + +    
Sbjct: 87  EIIYVXXLXF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVGEG--- 139
Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLI 276
                +F+ +PNNP G +   E++ +IL+    V LDEAY EF G ES ++++KK++NL 
Sbjct: 140 ---DVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHG-ESYVDFLKKYENLA 195
Query: 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXXLQN-PIYLEVK 335
           V+RTFSK   LA  RVGY       I+   R + P+N            L +  I+ E  
Sbjct: 196 VIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQXFAKVALDHREIFEERT 255
Query: 336 EALIKERERLFKLLKD 351
           + +++ERER    L++
Sbjct: 256 KFIVEERERXKSALRE 271

>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate Aminotransferase From Clostridium Acetobutylicum Length = 361

Iteration: 1
 Score =  102 bits (253), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 144/291 (49%), Gaps = 20/291 (6%)
Query: 93  KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILV 151
           K  +++   +N NP G P      + + +K   +YPD   RRL  ++     L+   I++
Sbjct: 24  KGRELLDYSSNINPLGIPKSFLNNIDEGIKNLGVYPDVNYRRLNKSIENYLKLKDIGIVL 83
Query: 152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIA 211
           G GA E+I+L +       +KI+   P++  YE +A  +G +VV      +  ++ E I 
Sbjct: 84  GNGASEIIELSISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDII 139
Query: 212 DAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAYTEFSG--LESR 265
             +  +    + + +PNNP+G +IN E  + +L    E    +++DEA+ EF+G    S 
Sbjct: 140 SKI--DDVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSF 197
Query: 266 MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-PYNXXXXXXXXXXX 324
           +  +K +  L ++R  +K   + G+R GYG      I    +AKQ P+N           
Sbjct: 198 VGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAAIN 257
Query: 325 XLQNPIYLEVKEALI---KERERLFKLLKDVPFLNP-YPSYSNFILCEVTS 371
            L++  Y+E  E+L+   KER+R  + L  + F+   +  ++NF+LC + +
Sbjct: 258 CLKDTNYIE--ESLLWIKKERKRFIEELNKIGFIKRVFSPHANFVLCRLEN 306

>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate Decarboxylase From Salmonella Enterica Length = 364

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 16/291 (5%)
Query: 90  LGRKPEDIVKIDANENPYGPPPEVREAL-GQLKFPYIYPDPESRRLRAALAKDSGLESDH 148
           LG  P+ ++   AN NP G P  V+ AL   L     YPD +   L  ALA+   + +  
Sbjct: 19  LGISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDADYFHLHQALARHHQVPASW 78
Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNV 207
           IL G G  E I   +   L P   ++   P F  Y    A +G  + +   R++D     
Sbjct: 79  ILAGNGETESI-FTVASGLKPRRAMI-VTPGFAEYGRALAQSGCEIRRWSLREADGWQLT 136
Query: 208 ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL-----EMPILVVLDEAYTEFSGL 262
           + I +A+  +   C+FL +PNNP G ++ +  LL+ +      + I ++LDEA+ +F   
Sbjct: 137 DAILEALTPDL-DCLFLCTPNNPTG-LLPERPLLQAIADRCKSLNINLILDEAFIDFIPH 194
Query: 263 ESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQPYNXXXXXXX 320
           E+  +  +K + ++ VLR+ +K   + GLR+GY      + +  + R + P++       
Sbjct: 195 ETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMPWSVNALAAL 254
Query: 321 XXXXXLQNPIYLEVKEALIKER-ERLFKLLKDVPFLNPYPSYSNFIL--CE 368
                LQ+  + +     ++E   R ++ L  +P L  YP  +N++L  CE
Sbjct: 255 AGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVYPGRANYLLLRCE 305

>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase (Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60 A Resolution Length = 337

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 140/333 (42%), Gaps = 21/333 (6%)
Query: 92  RKPEDIVKIDANENPYGPPPEVREALGQL-----KFPYIYPDPESRRLRAALAKDSGLES 146
           R     V +  NENP    P V+ A+        ++P+   D E R  R  LA+      
Sbjct: 13  RAAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPF---DAEPRVXRK-LAEHFSCPE 68
Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN 206
           D++ +  G DE  D I         + V   P F  Y    AV+G    ++    D  L+
Sbjct: 69  DNLXLVRGIDECFDRI--SAEFSSXRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLD 126
Query: 207 VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRM 266
              +A      +  C+ L +P+NP G  ++  +L ++ +    +++DE Y ++S   +R 
Sbjct: 127 PNDLAQV---SRDDCVVLANPSNPTGQALSAGELDQLRQRAGKLLIDETYVDYSSFRAR- 182
Query: 267 EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXXL 326
             +   +N +V R+FSK  GLAGLR+G    P  +I    R +   N            L
Sbjct: 183 -GLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAXKRKQWFCNVGTLDLHALEAAL 241
Query: 327 QNPIYLEVKEA-LIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMXXXXXXXXXXXM 385
            N    E   A  + +R R+   L+ + +     S +NF+L E  +G             
Sbjct: 242 DNDRAREAHIAKTLAQRRRVADALRGLGY-RVASSEANFVLVENAAG---ERTLRFLRER 297
Query: 386 GVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 418
           G+ ++      L  ++R+S+G+ E  D L+  L
Sbjct: 298 GIQVKDAGQFGLHHHIRISIGREEDNDRLLAAL 330

>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form Length = 389

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 119/250 (47%), Gaps = 24/250 (9%)
Query: 84  EVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL---KFPYIYPDPESRRLRAALA- 139
           ++  I  G K  D++ +   E  +  P  ++E   +       +  P+     LR A+A 
Sbjct: 17  KLFDIAAGMK--DVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAE 74
Query: 140 ---KDSGLESD---HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA 193
              K +G+E+D    I+V  GA++   + +   L  G++++   P F  Y     + G  
Sbjct: 75  KLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGK 134
Query: 194 VVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMP 247
            V+VP   + +F LNV+ +   V  +K + + + SP NP G+++  +DL +I    +E  
Sbjct: 135 PVEVPTYEEDEFRLNVDELKKYV-TDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHD 193
Query: 248 ILVVLDEAYTEFSGLESRMEWVKKHDNL----IVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
           ++V+ DE Y  F   ++R   +   D +    I +  FSK   + G R+G+ A P  IIE
Sbjct: 194 LIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIE 253
Query: 304 YLWRAKQPYN 313
            + +  Q YN
Sbjct: 254 RMVKF-QMYN 262

>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From Pyrococcus Horikoshii Ot3 Length = 388

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 119/250 (47%), Gaps = 24/250 (9%)
Query: 84  EVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL---KFPYIYPDPESRRLRAALA- 139
           ++  I  G K  D++ +   E  +  P  ++E   +       +  P+     LR A+A 
Sbjct: 16  KLFDIAAGMK--DVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAE 73
Query: 140 ---KDSGLESD---HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA 193
              K +G+E+D    I+V  GA++   + +   L  G++++   P F  Y     + G  
Sbjct: 74  KLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGK 133
Query: 194 VVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMP 247
            V+VP   + +F LNV+ +   V  +K + + + SP NP G+++  +DL +I    +E  
Sbjct: 134 PVEVPTYEEDEFRLNVDELKKYV-TDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHD 192
Query: 248 ILVVLDEAYTEFSGLESRMEWVKKHDNL----IVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
           ++V+ DE Y  F   ++R   +   D +    I +  FSK   + G R+G+ A P  IIE
Sbjct: 193 LIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIE 252
Query: 304 YLWRAKQPYN 313
            + +  Q YN
Sbjct: 253 RMVKF-QMYN 261

>pdb|3LY1|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate Aminotransferase (Yp_050345.1) From Erwinia Carotovora Atroseptica Scri1043 At 1.80 A Resolution Length = 354

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 17/285 (5%)
Query: 98  VKIDANENPYGPPPEVREAL-GQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGAD 156
           ++I+ NENP G  P+ + A    +     Y   E   L   LA    +E+  IL+  G+ 
Sbjct: 19  IRINFNENPLGXSPKAQAAARDAVVKANRYAKNEILXLGNKLAAHHQVEAPSILLTAGSS 78
Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER 216
           E I   +        ++V    T+   E  A + G  V KV    +++ ++E +  AV  
Sbjct: 79  EGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGXKVTKVKXLDNWAFDIEGLKAAVAA 138
Query: 217 -EKPKCIFLTSPNNPDGSIINDEDLLK--ILEMP--ILVVLDEAYTEFSGLESRMEWV-- 269
              P  ++L +PNNP G+I    D+++  I   P     ++DEAY EF   + R   +  
Sbjct: 139 YSGPSIVYLVNPNNPTGTI-TPADVIEPWIASKPANTXFIVDEAYAEFVN-DPRFRSISP 196
Query: 270 ---KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXXL 326
              +  +N+I+L+TFSK    AG RVGY     ++I    R                   
Sbjct: 197 XITQGAENIILLKTFSKIHAXAGXRVGYAVAHPTVIALXGRYVAGEKINFSGVDAALASX 256
Query: 327 QNPIYLEV-KEALIKERERLFKLLKDVPFLNPY-PSYSNFILCEV 369
            +  ++   K++    R+ L K L+D+    PY PS  NF+  ++
Sbjct: 257 NDSAFITYSKKSNDVSRQILLKALEDLKL--PYLPSEGNFVFHQL 299

>pdb|3FKD|A Chain A, The Crystal Structure Of L-Threonine-O-3-Phosphate Decarboxylase From Porphyromonas Gingivalis Length = 350

Iteration: 1
 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 125/304 (41%), Gaps = 26/304 (8%)
Query: 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
           YP+P++  LR  LAK + ++++ ILV  G       I +     G + +   P+F  YE 
Sbjct: 47  YPEPDAGTLRQXLAKRNSVDNNAILVTNGPTAAFYQIAQAF--RGSRSLIAIPSFAEYED 104
Query: 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL- 244
                   V   P   D       I +A       C +L +PNNPDG ++   ++L++L 
Sbjct: 105 ACRXYEHEVCFYPSNED-------IGEADFSNXDFC-WLCNPNNPDGRLLQRTEILRLLN 156
Query: 245 EMP-ILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302
           + P    VLD++Y  F+  E  R   +K   NL+ + +FS   G+ GLR+GY        
Sbjct: 157 DHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVXVYSFSHAYGIPGLRIGYIVANKDFX 216
Query: 303 EYLWRAKQPYNXXXXXXXXXXXXLQNPIYLEVKEALIKERER----LFKLLKDVPFLNPY 358
           + +     P+             L +P    +    I++ +R        L  +  +  +
Sbjct: 217 KRVAAFSTPWAVNALAIEAAKFILIHPAQFTLP---IRKWQRNTVDFITALNRLDGVEVH 273
Query: 359 PSYSNFILCEVTSGMXXXXXXXXXXXMGVMIRHYNNKELKG----YVRVSVGKPEHTDAL 414
           PS + F L  +  G               +IR  +N   +G    YVR++  +P      
Sbjct: 274 PSGTTFFLLRLKKGTAAELKKYXLEEYNXLIRDASN--FRGLDESYVRITTQRPAQNQLF 331
Query: 415 MECL 418
           ++ L
Sbjct: 332 IKAL 335

>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255) From Thermotoga Maritima At 1.90 A Resolution Length = 389

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 106/241 (43%), Gaps = 27/241 (11%)
Query: 76  PYQPILPFEVLSIQLGRKPEDIVKIDANENPY-GPPPEVREAL-----GQLKFPYIYPDP 129
           P    +  +  +  L +K ED++ + A E  +  P P V EA+     G++K    Y DP
Sbjct: 22  PISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVK----YTDP 77
Query: 130 ES-RRLRAALAKDSG------LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM 182
                LR  +AK  G      +  D ++V  GA + +      +LDPGD+++   P +  
Sbjct: 78  RGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVS 137
Query: 183 Y--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240
           Y  +   A     VV+     +F  ++E + + +   K K + + SPNNP G +   E L
Sbjct: 138 YIPQIILAGGTVNVVETFMSKNFQPSLEEV-EGLLVGKTKAVLINSPNNPTGVVYRREFL 196
Query: 241 LKILEMP----ILVVLDEAYTEF---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
             ++ +       ++ DE Y          S ++  +  D ++ +  FSK   + G RVG
Sbjct: 197 EGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVG 256
Query: 294 Y 294
           Y
Sbjct: 257 Y 257

>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 1 Length = 385

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 27/261 (10%)
Query: 67  IRSHLRKLKPYQPILPFEV--LSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
           +R   R+++  +P  P  V   +++L R+  D+V + A E  +  P  V+EA    L Q 
Sbjct: 1   MRGLSRRVQAMKPDAPVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDK 172
           K  Y  P   PE   LR ALA    +++GL    +  +V  G  + +  + + +LDPGD+
Sbjct: 61  KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
           ++   P +  Y       G  VV+V    +  F  + E +  A+   + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKILEMPI----LVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
            G++   E L  +  + +     +V DE Y    + G       V     L V    +K 
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAKA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYL 305
             + G R+GY   P  +I+ +
Sbjct: 236 FAMTGWRIGYACGPKEVIKAM 256

>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 2 Complexed With Tryptophan Length = 385

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 117/261 (44%), Gaps = 27/261 (10%)
Query: 67  IRSHLRKLKPYQP--ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
           +R   R+++  +P  ++     +++L R+  D+V + A E  +  P  V+EA    L Q 
Sbjct: 1   MRGLSRRVQAMKPDAVVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDK 172
           K  Y  P   PE   LR ALA    +++GL    +  +V  G  + +  + + +LDPGD+
Sbjct: 61  KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
           ++   P +  Y       G  VV+V    +  F  + E +  A+   + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKILEMPI----LVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
            G++   E L  +  + +     +V DE Y    + G       V     L V    +K 
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAKA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYL 305
             + G R+GY   P  +I+ +
Sbjct: 236 FAMTGWRIGYACGPKEVIKAM 256

>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803) From Eubacterium Rectale At 2.10 A Resolution Length = 398

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 88/179 (49%), Gaps = 20/179 (11%)
Query: 135 RAALAK------DSGLESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFDA 187
           RAA+A+       +   +D++    GA   + +  R +  D  D+ +   P F  Y+   
Sbjct: 82  RAAIAEFLNNTHGTHFNADNLYXTXGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFV 141
Query: 188 AVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246
              GA +V+VP  ++ F ++ + + + +     + + + SPNNP G++ ++E + K+ ++
Sbjct: 142 NAAGARLVEVPADTEHFQIDFDALEERINAHT-RGVIINSPNNPSGTVYSEETIKKLSDL 200
Query: 247 ----------PILVVLDEAYTEFSGLESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGY 294
                     PI ++ DE Y E      ++ +V K +DN +V  ++SK   L G R+GY
Sbjct: 201 LEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGY 259

>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase Length = 381

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 22/205 (10%)
Query: 106 PYGPPP-----EVREALG---QLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADE 157
           P  PPP      VR ALG   Q   P   P      LR ALA++  +E + ++V  GA E
Sbjct: 35  PSNPPPPFLLEAVRRALGRQDQYAPPAGLPA-----LREALAEEFAVEPESVVVTSGATE 89
Query: 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP---RKSDFSLNVELIADAV 214
            + ++++ ++ PGD++V   P F +Y  DA + GA    V        F L++  +  A+
Sbjct: 90  ALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKAL 149
Query: 215 EREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE-FSGLESRMEWV 269
              + + + L +P NP G +  + +L  I  +     + ++ DE Y E + G   R    
Sbjct: 150 T-PRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLRE 208
Query: 270 KKHDNLIVLRTFSKRAGLAGLRVGY 294
              +    + +  KR    G RVG+
Sbjct: 209 FAPERTFTVGSAGKRLEATGYRVGW 233

>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double Mutant 1 Complexed With Aspartate Length = 385

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 27/261 (10%)
Query: 67  IRSHLRKLKPYQP--ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
           +R   R+++  +P   +     +++L R+  D+V + A E  +  P  V+EA    L Q 
Sbjct: 1   MRGLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDK 172
           K  Y  P   PE   LR ALA    +++GL    +  +V  G  + +  + + +LDPGD+
Sbjct: 61  KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
           ++   P +  Y       G  VV+V    +  F  + E +  A+   + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKILEMPI----LVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
            G++   E L  +  + +     +V DE Y    + G       V     L V    +K 
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAKA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYL 305
             + G R+GY   P  +I+ +
Sbjct: 236 FAMTGWRIGYACGPKEVIKAM 256

>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single Mutant 1 Length = 385

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 27/261 (10%)
Query: 67  IRSHLRKLKPYQP--ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
           +R   R+++  +P   +     +++L R+  D+V + A E  +  P  V+EA    L Q 
Sbjct: 1   MRGLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDK 172
           K  Y  P   PE   LR ALA    +++GL    +  +V  G  + +  + + +LDPGD+
Sbjct: 61  KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
           ++   P +  Y       G  VV+V    +  F  + E +  A+   + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKILEMPI----LVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
            G++   E L  +  + +     +V DE Y    + G       V     L V    +K 
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAKA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYL 305
             + G R+GY   P  +I+ +
Sbjct: 236 FAMTGWRIGYACGPKEVIKAM 256

>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With Maleate Length = 385

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 27/261 (10%)
Query: 67  IRSHLRKLKPYQP--ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
           +R   R+++  +P   +     +++L R+  D+V + A E  +  P  V+EA    L Q 
Sbjct: 1   MRGLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDK 172
           K  Y  P   PE   LR ALA    +++GL    +  +V  G  + +  + + +LDPGD+
Sbjct: 61  KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
           ++   P +  Y       G  VV+V    +  F  + E +  A+   + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKILEMPI----LVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
            G++   E L  +  + +     +V DE Y    + G       V     L V    +K 
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAKA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYL 305
             + G R+GY   P  +I+ +
Sbjct: 236 FAMTGWRIGYACGPKEVIKAM 256

>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus Length = 382

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 27/261 (10%)
Query: 67  IRSHLRKLKPYQP--ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
           +R   R+++  +P   +     +++L R+  D+V + A E  +  P  V+EA    L Q 
Sbjct: 1   MRGLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDK 172
           K  Y  P   PE   LR ALA    +++GL    +  +V  G  + +  + + +LDPGD+
Sbjct: 61  KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
           ++   P +  Y       G  VV+V    +  F  + E +  A+   + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKILEMPI----LVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
            G++   E L  +  + +     +V DE Y    + G       V     L V    +  
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAXA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYL 305
             + G R+GY   P  +I+ +
Sbjct: 236 FAMTGWRIGYACGPKEVIKAM 256

>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum Length = 388

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 23/229 (10%)
Query: 96  DIVKIDANENPYGPPPEVREA----LGQLKFPYIYPDPESRRLRAALA----KDSGL--E 145
           D+    A E  +  P  + EA    L Q K  Y  P     RLR A+A    +D+GL   
Sbjct: 31  DVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRY-GPAAGEPRLREAIAQKLQRDNGLCYG 89
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY-EFDAAVNGAAVV-KVPRKSDF 203
           +D+ILV  G  + I  +M  +++PGD+++   P +  Y E      G  V+     ++ F
Sbjct: 90  ADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQF 149
Query: 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTEF 259
            ++ E I  A+   K K +   +P+NP G +   +++  I    +E  + V+ DE Y + 
Sbjct: 150 KVSPEQIRQAI-TPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKI 208
Query: 260 -----SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
                  L       + ++  +V   F+K   + G RVG+ A P+ +++
Sbjct: 209 LYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLVK 257

>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698) From Thermotoga Maritima At 2.50 A Resolution Length = 409

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 7/153 (4%)
Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN 206
           +++LV  G  E I      + +PGD+I+   P +  Y   A + G  ++ V R+ +    
Sbjct: 103 ENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRXEEGFA 162
Query: 207 VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE--FS 260
           +    ++   E+ K I L++P NP G +   ++   ++E+     + +++DE Y+E  F 
Sbjct: 163 IPQNLESFINERTKGIVLSNPCNPTGVVYGKDEXRYLVEIAERHGLFLIVDEVYSEIVFR 222
Query: 261 GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
           G E       + D ++V+ + S +    G RVG
Sbjct: 223 G-EFASALSIESDKVVVIDSVSXKFSACGARVG 254

>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of N-Succinyldiaminopimelate Aminotransferase From Mycobacterium Tuberculosis Length = 411

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 102/234 (43%), Gaps = 17/234 (7%)
Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
           +LV  GA E I   +  +++PG +++   P +  Y    A+ GA  V VP   D      
Sbjct: 89  VLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPD-GRGFA 147
Query: 209 LIADAVERE---KPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSG 261
           L ADA+ R    + + + + SP+NP G++++  +L  I E+     ++V+ DE Y     
Sbjct: 148 LDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVF 207
Query: 262 LESRMEWVKKHDNL----IVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXX 317
             +R   +   D +    I + + +      G ++G+   P  +I  +  AKQ  +    
Sbjct: 208 DHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGWACGPAELIAGVRAAKQYLSYVGG 267
Query: 318 XXXXXXXXL----QNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILC 367
                   L    ++     ++ +L   R+RL   L ++ F   + SY  + LC
Sbjct: 268 APFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEIGFAV-HDSYGTYFLC 320

>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate Aminotransferase (Substrate Free Form), From Thermus Thermophilus Hb27 Length = 397

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 94/188 (50%), Gaps = 13/188 (6%)
Query: 134 LRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA 193
           LRA +A+  G+  + +L+  G+ + +DL+ +  LD G  ++   P++        + G  
Sbjct: 79  LRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPR 138
Query: 194 VVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSII----NDEDLLKILEMPI 248
            + VP   +   +++ + + ++RE+P+ ++L  S  NP G +         L  ++E  +
Sbjct: 139 FLTVPAGEE-GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGL 197
Query: 249 LVVLDEAYTEFSGLESRM----EWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302
           +VV D+AY E    E+R+    E  ++  +  +I L +FSK     GLRV +       +
Sbjct: 198 VVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEAL 256
Query: 303 EYLWRAKQ 310
           + L +AKQ
Sbjct: 257 QKLVQAKQ 264

>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From Pseudomonas Aeruginosa Length = 412

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 139/328 (42%), Gaps = 31/328 (9%)
Query: 69  SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGP-PPEVREAL---GQLKFPY 124
           + + +L PY   +  E L +   R+ EDI+ +    NP GP PP + E L    Q +  +
Sbjct: 12  ARIDRLPPYVFNITAE-LKMAARRRGEDIIDLSMG-NPDGPTPPHIVEKLCTVAQREDTH 69
Query: 125 IYPDPES-RRLRAALAK------DSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDC 176
            Y       RLR A++       D  ++ +   +V  G+ E +  +M   LD GD I+  
Sbjct: 70  GYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVP 129
Query: 177 PPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE---KPKCIFLTSPNNPDGS 233
            P++ ++ + A + GA V  VP         EL  +   RE   KP+ + L  P+NP   
Sbjct: 130 NPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNEL--ERAIRESIPKPRMMILGFPSNPTAQ 187
Query: 234 IINDEDLLKILEMP----ILVVLDEAYTE--FSGLE--SRMEWVKKHDNLIVLRTFSKRA 285
            +  +   +++ +     ++VV D AY +  + G +  S M+     D  +   T SK  
Sbjct: 188 CVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSY 247
Query: 286 GLAGLRVGYGAFPLSIIEYLWRAK--QPYNXXXXXXXXXXXXLQ--NPIYLEVKEALIKE 341
            +AG R+G+      ++  L R K    Y             L+       ++     + 
Sbjct: 248 NMAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQR 307
Query: 342 RERLFKLLKDVPFLNPYPSYSNFILCEV 369
           R+ L K L++  ++   P  S ++  ++
Sbjct: 308 RDVLVKGLREAGWMVENPKASMYVWAKI 335

>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From Neisseria Meningitidis Z2491 At 1.91 A Resolution Length = 396

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 117/259 (45%), Gaps = 39/259 (15%)
Query: 71  LRKLKPYQPILPFEVL--SIQLGRKPE--DIVKIDANENPYGPPPEVREALGQL-----K 121
           L++LKPY    PF  L  + Q    PE  + V +   E  +  P  + +AL        K
Sbjct: 6   LKQLKPY----PFARLHEAXQGISAPEGXEAVPLHIGEPKHPTPKVITDALTASLHELEK 61
Query: 122 FPYIYPDPESRRLRAALAKD--SGLESD---HILVGCGADELIDLIMRCVLDP---GDK- 172
           +P     PE R+  A   K    GL  D    IL   G+ E +   ++ VL+P   G K 
Sbjct: 62  YPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKP 121
Query: 173 -IVDCPPTFTMYEFDAAVNGAAV--VKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN 229
            IV   P + +YE    + G  +     P  S F+ +   I++ V + + K +F+ SPNN
Sbjct: 122 AIVSPNPFYQIYEGATLLGGGEIHFANCPAPS-FNPDWRSISEEVWK-RTKLVFVCSPNN 179
Query: 230 PDGSIINDEDLLKILEMP----ILVVLDEAYTE--FSG------LESRMEWVKKHDNLIV 277
           P GS+++ +   ++ ++      ++  DE Y+E  F G      L++  +  +    L+ 
Sbjct: 180 PSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLX 239
Query: 278 LRTFSKRAGLAGLRVGYGA 296
             + S R+ + GLR G+ A
Sbjct: 240 FTSLSXRSNVPGLRSGFVA 258

>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia Coli Identify A Methionine Aminotransferase Function. Length = 386

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 17/186 (9%)
Query: 132 RRLRAALAKDS----GLESD---HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE 184
           + LR A+A+ +    G + D    I V  GA E +   +  ++  GD+++   P++  Y 
Sbjct: 70  QALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYA 129
Query: 185 FDAAVNGAAVVKVP-RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243
              A++G  V ++  +   F ++ +  A A+  E+ + + L +P+NP  ++    D   +
Sbjct: 130 PAIALSGGIVKRMALQPPHFRVDWQEFA-ALLSERTRLVILNTPHNPSATVWQQADFAAL 188
Query: 244 LEM----PILVVLDEAYTEFSGLESRMEWVKKHDNL----IVLRTFSKRAGLAGLRVGYG 295
            +      I V+ DE Y   +  +     V  H  L    + + +F K   + G +VGY 
Sbjct: 189 WQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYC 248
Query: 296 AFPLSI 301
             P  I
Sbjct: 249 VAPAPI 254

>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine Aminotransferase In Complex With Plp Length = 448

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 129 PESRRLRAALAKDSGLESDH-ILVGCGADELIDLIMRCVLDPGDKIVDCPPT-------F 180
           P    L   L K  G+  D+ I++  G+ + +DLI R  L+PGD +V   PT       F
Sbjct: 122 PLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAF 181
Query: 181 TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKC----IFLTSPN--NPDGSI 234
             YE          +++P   D  + VE++ + ++  K +     +  T P   NP G  
Sbjct: 182 NFYE-------PQYIQIPL-DDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVT 233
Query: 235 INDEDLLKILEMP----ILVVLDEAYTE--FSGL-ESRMEWVKKHDNLIVLRTFSKRAGL 287
           +N++    +LE+      +VV D+ Y E  +SG  E +++ +     +I L TFSK    
Sbjct: 234 MNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA- 292
Query: 288 AGLRVGYGAFPLSIIEYLWRAKQ 310
            G R+G+      II  +  AKQ
Sbjct: 293 PGFRIGWMVGDPGIIRKMEIAKQ 315

>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From Pyrococcus Horikoshii Ot3 Length = 403

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 129 PESRRLRAALAKDSGLESDH-ILVGCGADELIDLIMRCVLDPGDKIVDCPPT-------F 180
           P    L   L K  G+  D+ I++  G+ + +DLI R  L+PGD +V   PT       F
Sbjct: 77  PLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAF 136
Query: 181 TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKC----IFLTSPN--NPDGSI 234
             YE          +++P   D  + VE++ + ++  K +     +  T P   NP G  
Sbjct: 137 NFYE-------PQYIQIPL-DDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVT 188
Query: 235 INDEDLLKILEMP----ILVVLDEAYTE--FSGL-ESRMEWVKKHDNLIVLRTFSKRAGL 287
           +N++    +LE+      +VV D+ Y E  +SG  E +++ +     +I L TFSK    
Sbjct: 189 MNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA- 247
Query: 288 AGLRVGYGAFPLSIIEYLWRAKQ 310
            G R+G+      II  +  AKQ
Sbjct: 248 PGFRIGWMVGDPGIIRKMEIAKQ 270

>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus Pfu-1397077-001 Length = 406

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 9/159 (5%)
Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVV--KVPRKSDFS 204
           D + V     E + LI   +LDPGD+I+   P++  Y       G   V  +   + D+ 
Sbjct: 102 DDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQ 161
Query: 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAY--TE 258
            +++ I   +  ++ K I + +PNNP G++ + + L +IL    E  I V+ DE Y    
Sbjct: 162 PDIDDIRKKI-TDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMT 220
Query: 259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297
           + G       + K   +IV+   SK     G R+GY  F
Sbjct: 221 YEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYF 259

>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine Aminotransferase From Saccharomyces Cerevisiae Length = 447

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 31/218 (14%)
Query: 107 YGPPP-EVREALGQLKFPYIYPDPESR---RLRAALAK------DSGLESDHILVGCGAD 156
           Y PP   ++EA   L  P +     +R    L  +L K      ++ L+++++ V  GA+
Sbjct: 69  YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGAN 128
Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP------------RKSDFS 204
           E I   +  +L+ GD+++   P F  Y  +  + G  VV VP            R  +++
Sbjct: 129 EGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWT 188
Query: 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTE-- 258
           ++ E    A+   K K + + +P+NP G +   E+L  +    ++  ++++ DE Y    
Sbjct: 189 IDFEQFEKAI-TSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLY 247
Query: 259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLA--GLRVGY 294
           F+   +R+  +      + L   S     A  G R+G+
Sbjct: 248 FTDSFTRIATLSPEIGQLTLTVGSAGXSFAATGWRIGW 285

>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate Aminotransferase Length = 407

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 110/237 (46%), Gaps = 36/237 (15%)
Query: 109 PPPEV--REALGQLKFPYIYPDPES-------------RRLRAALAKDSGLES--DHILV 151
           P PE+  R  LG++    +  +P+S               L A L K   LE   ++I++
Sbjct: 44  PDPELIPRAVLGEIAKEVLEKEPKSVMYTPANGIPELREELAAFLKKYDHLEVSPENIVI 103
Query: 152 GCGADELIDLIMRCVLDPGDKIVDCPPTF--TMYEFDAAVNGAAVVKVPRKSDFSLNVEL 209
             G    +DL+ R ++DPGD ++   P++  T+  F+    GA +  VP  +D  + V+L
Sbjct: 104 TIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQL--GAKIEGVPVDND-GMRVDL 160
Query: 210 IADAVER-----EKPKCIF-LTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEF 259
           + + ++      +K K I+ + +  NP G  ++ E    +LE+     +L++ D AY   
Sbjct: 161 LEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFM 220
Query: 260 SGLESRMEWVKKHDN---LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
                 +  +K  DN   +IV  T SK  G  G R+G+      I++ +   KQP +
Sbjct: 221 RYEGGDIVPLKALDNEGRVIVAGTLSKVLG-TGFRIGWIIAEGEILKKVLMQKQPID 276

>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii Reveals Its Similarity In The Active Site To Kynurenine Aminotransferases Length = 370

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 24/245 (9%)
Query: 83  FEVLSI-----QLGRKPEDIVKIDANENPYGPP-PEVREALGQLKFPYI-YPDP----ES 131
           FEV+ I     +L  + + ++ ++  E  +  P P V E +  LK     Y D     E 
Sbjct: 12  FEVMDILALAQKLESEGKKVIHLEIGEPDFNTPKPIVDEGIKSLKEGKTHYTDSRGILEL 71
Query: 132 RRLRAALAKD---SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA 188
           R   + L KD   + +  D+I++  G+   +   +  ++D GD+++   P +  Y+    
Sbjct: 72  REKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIR 131
Query: 189 VNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPI 248
             GA     P   DF+  VE + +A+  +K K I + SP+NP G +I+ E      E   
Sbjct: 132 FLGAK----PVFCDFT--VESLEEAL-SDKTKAIIINSPSNPLGEVIDREIYEFAYENIP 184
Query: 249 LVVLDEAYTEF---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL 305
            ++ DE Y          S +E+ +  +  I++  FS    + G R+GY      IIE +
Sbjct: 185 YIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSXLYAMTGWRIGYVISNDEIIEAI 244
Query: 306 WRAKQ 310
            + +Q
Sbjct: 245 LKLQQ 249

>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii In Complex With Kynurenine Length = 410

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 112/267 (41%), Gaps = 53/267 (19%)
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL 205
           ++ ILV  GA   +   ++ ++DPGD+++   P +  YE    + GA  V +P +S  + 
Sbjct: 85  NEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTD 144
Query: 206 NVELIA-----DAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEMPI----LVV 251
            ++  +     D  E E     K K I L +P+NP G +   ++L  I ++ +    L +
Sbjct: 145 GMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCI 204
Query: 252 LDEAYTEFSGLESRMEWV--KKHDNL------------IVLRTFSKRAGLAGLRVGYGAF 297
            DE Y          EW+    H ++            I + +  K   + G ++G+   
Sbjct: 205 SDEVY----------EWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIG 254
Query: 298 PLSIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYLEVK---------EALIKE----RER 344
           P  +I++L   +Q  N            L    ++++K          +L KE    R+R
Sbjct: 255 PAHLIKHLQTVQQ--NSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDR 312
Query: 345 LFKLLKDVPFLNPYPSYSNFILCEVTS 371
           + +LL  V      P    FI+ +V+S
Sbjct: 313 MVRLLNSVGLKPIVPDGGYFIIADVSS 339

>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase Length = 427

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVV---KVPRK 200
           LE+  +++  G  + IDL +  + +PG  I+   P F++Y+  A   G  V     +P K
Sbjct: 116 LEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEK 175
Query: 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAY 256
           S + ++++ +   ++ EK  C+ + +P+NP GS+ +   L KIL +     + ++ DE Y
Sbjct: 176 S-WEIDLKQLEYLID-EKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIY 233
Query: 257 TEFSGLESRMEWVKKHDN---LIVLRTFSKRAGLAGLRVGY 294
            +    + + E +        ++     +KR  + G R+G+
Sbjct: 234 GDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGW 274

>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase (Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70 A Resolution Length = 375

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 96/185 (51%), Gaps = 12/185 (6%)
Query: 119 QLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
           +L + +I   P  ++  + L   +G++ + IL   GA     L++  +++PGD ++   P
Sbjct: 56  KLNYGWIEGSPAFKKSVSQLY--TGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYP 113
Query: 179 TF-TMYEFDAAVNGAAV--VKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235
           T+  +Y+   ++ GA V   ++  ++ +  ++E +   + R   K I + + NNP G++ 
Sbjct: 114 TYQQLYDIPKSL-GAEVDLWQIEEENGWLPDLEKLRQLI-RPTTKXICINNANNPTGAVX 171
Query: 236 ND---EDLLKIL-EMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLR 291
           +    E+L++I  E+   ++ DE Y  FS L+     ++ +D  I + + S    L G+R
Sbjct: 172 DRTYLEELVEIASEVGAYILSDEVYRSFSELDVP-SIIEVYDKGIAVNSLSXTYSLPGIR 230
Query: 292 VGYGA 296
           +G+ A
Sbjct: 231 IGWVA 235

>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate Aminotransferase From Chlamydia Trachomatis Length = 400

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 19/185 (10%)
Query: 127 PDPESRRLRAALAKD---SGLESDHILVGCGADELIDLI-MRCVLDPGDKIVDCPPTFTM 182
           PD     LR  L++D     +++  I +  GA   +DL  +     P   +    P++  
Sbjct: 73  PDFGLPALRQKLSEDFYRGFVDAKEIFISDGAK--VDLFRLLSFFGPNQTVAIQDPSYPA 130
Query: 183 YEFDAAVNGAA-VVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241
           Y   A + GA  ++ +P   + +   E   D         + L SPNNP G+++N + L 
Sbjct: 131 YLDIARLTGAKEIIALPCLQENAFFPEFPEDT----HIDILCLCSPNNPTGTVLNKDQLR 186
Query: 242 KI----LEMPILVVLDEAYTEF----SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
            I    +E  IL++ D AY+ F    S  +S  E        I + +FSK  G AG+R+G
Sbjct: 187 AIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLG 246
Query: 294 YGAFP 298
           +   P
Sbjct: 247 WTVIP 251

>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii, Plp-Bound Form Length = 410

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 53/267 (19%)
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL 205
           ++ ILV  GA   +   ++ ++DPGD+++   P +  YE    + GA  V +P +S  + 
Sbjct: 85  NEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTD 144
Query: 206 NVELIA-----DAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEMPI----LVV 251
            ++  +     D  E E     K K I L +P+NP G +   ++L  I ++ +    L +
Sbjct: 145 GMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCI 204
Query: 252 LDEAYTEFSGLESRMEWV----KKHDNLIVLRTFSKRA----------GLAGLRVGYGAF 297
            DE Y          EW+      H  +  L    +R            + G ++G+   
Sbjct: 205 SDEVY----------EWLVYTGHTHVKIATLPGMWERTITIGSAGXTFSVTGWKLGWSIG 254
Query: 298 PLSIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYLEVK---------EALIKE----RER 344
           P  +I++L   +Q  N            L    ++++K          +L KE    R+R
Sbjct: 255 PAHLIKHLQTVQQ--NSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDR 312
Query: 345 LFKLLKDVPFLNPYPSYSNFILCEVTS 371
           + +LL  V      P    FI+ +V+S
Sbjct: 313 MVRLLNSVGLKPIVPDGGYFIIADVSS 339

>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp Length = 428

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 40/220 (18%)
Query: 99  KIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADEL 158
           K  AN   Y   PE R+A+ +             R+R         + + +++  GA   
Sbjct: 74  KAIANFQDYHGLPEFRKAIAKF-----MEKTRGGRVR--------FDPERVVMAGGATGA 120
Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE- 217
            + I+ C+ DPGD  +   P +  +  D       V  +P   + S N ++ + AV+   
Sbjct: 121 NETIIFCLADPGDAFLVPSPYYPAFNRDLRWR-TGVQLIPIHCESSNNFKITSKAVKEAY 179
Query: 218 --------KPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYT-------E 258
                   K K + LT+P+NP G+ ++ + L  +L       I +V DE Y        +
Sbjct: 180 ENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQ 239
Query: 259 FSGL-----ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
           F  +     E  M +  K D + ++ + SK  GL G RVG
Sbjct: 240 FVSIAEILDEQEMTYCNK-DLVHIVYSLSKDMGLPGFRVG 278

>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana Length = 456

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 22/188 (11%)
Query: 131 SRRLRAALA----KDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           ++ LR A+A    +D  ++S+ + V  GA   I   ++ +L     I    PTF  Y  D
Sbjct: 114 NKTLRKAIAETFYRDLHVKSNEVFVSDGAQSDISR-LQLLLGSNVTIAVQDPTFPAY-ID 171
Query: 187 AAVNGAAVVKVPRKSDFSLNV---------ELIADAVEREKPKCIFLTSPNNPDGSIIND 237
           ++V          K+    NV             D     +   IF  SPNNP G + + 
Sbjct: 172 SSVIIGQTGHFHEKTKKYQNVVYMPCGPNNSFFPDLAMTPRTDVIFFCSPNNPTGYVASR 231
Query: 238 EDLLKILEMP----ILVVLDEAYTEF---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGL 290
           + L ++++       +++ D AY  F       S  E     +  I + +FSK AG  G+
Sbjct: 232 KQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPRSIYEIPGAREVAIEVSSFSKFAGFTGV 291
Query: 291 RVGYGAFP 298
           R+G+   P
Sbjct: 292 RLGWSIIP 299

>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase Length = 402

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 141 DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK---V 197
           ++ LE+  +++  G  + I+L +  + +PG  I+   P F++Y   A   G  V     +
Sbjct: 90  EAPLEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLYNLL 149
Query: 198 PRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLD 253
           P KS + ++++ +   ++ EK  C+ + +P+NP GS+ +   L KIL +     + ++ D
Sbjct: 150 PEKS-WEIDLKQLESLID-EKTACLVVNNPSNPCGSVFSKRHLQKILAVAERQCVPILAD 207
Query: 254 EAYTEFSGLESRME-WVKKHDNLIVLRT--FSKRAGLAGLRVGY 294
           E Y +    + + E       N+ +L     + R  + G R+G+
Sbjct: 208 EIYGDMVFSDCKYEPMATLSTNVPILSCGGLAXRWLVPGWRLGW 251

>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus Length = 404

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 17/217 (7%)
Query: 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS 204
           + D + +  G    +  +  CV++PGD ++   P +T Y     +     V +  +    
Sbjct: 108 KEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHY 167
Query: 205 LNVELIADAVEREKPKCIFLTSPNNPDGSI----INDEDLLKILEMPILVVLDEAYTEFS 260
           L      D+   +K K I+LT PNNP GS     + DE + K       +V D AY  F 
Sbjct: 168 LPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAF- 226
Query: 261 GLESRMEWVKKHDN----LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXX 316
           G +++   +   +N     I + + SK    +G RVG+       I+ L + +   N   
Sbjct: 227 GFDAKNPSILASENGKDVAIEIYSLSKGYNXSGFRVGFAVGNKDXIQALKKYQTHTN--- 283
Query: 317 XXXXXXXXXLQN-PIY-LEVKEALIKERERLFKLLKD 351
                    LQ+  IY L   +  ++E+  +FK  +D
Sbjct: 284 ---AGXFGALQDAAIYALNHYDDFLEEQSNVFKTRRD 317

>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1) From Helicobacter Pylori 26695 At 2.19 A Resolution Length = 376

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 84/169 (49%), Gaps = 20/169 (11%)
Query: 144 LESDHILVGCGADE-LIDLIMRCVLDPGDKIVDCP-PTFTMYEFDAAVNGAAVVKVP--R 199
           L+ + ++   G+ E L +     + D  +  +  P P + +YE  A    A  +  P  +
Sbjct: 80  LKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLXPLTK 139
Query: 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPI----LVVLDEA 255
           ++DF+ ++    +  E ++   + L SPNNP G  ++ E+L+  +++ +    +++ DE 
Sbjct: 140 ENDFTPSL----NEKELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDEC 195
Query: 256 YTEF-------SGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296
           Y+E        S LE+  +   +   N++V+ + SKR+   GLR G+ A
Sbjct: 196 YSEIYENTPPPSLLEACXLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIA 244

>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Length = 432

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 222 IFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSGLE---SRMEWVKKHDN 274
           IF  SPNNP G+    E L +++E       ++V D AY  +   +   S  E     + 
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAXYXSDDNPRSIFEIPGAEEV 261
Query: 275 LIVLRTFSKRAGLAGLRVGYGAFPLSII 302
                +FSK AG  G+R+G+   P  ++
Sbjct: 262 AXETASFSKYAGFTGVRLGWTVIPKKLL 289

>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With L-malate Ion Length = 432

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 222 IFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSGLE---SRMEWVKKHDN 274
           IF  SPNNP G+    E L +++E       ++V D AY  +   +   S  E     + 
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEV 261
Query: 275 LIVLRTFSKRAGLAGLRVGYGAFPLSII 302
            +   +FSK AG  G+R+G+   P  ++
Sbjct: 262 AMETASFSKYAGFTGVRLGWTVIPKKLL 289

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	422
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	1e-148
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	1e-143
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	1e-142
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	1e-140
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	1e-133
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	1e-132
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	1e-132
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	1e-132
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	1e-131
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	1e-129
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	1e-125
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	1e-114
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	2e-63
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	2e-36
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	6e-32
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	1e-29
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	3e-29
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	1e-28
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	4e-28
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	5e-28
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	6e-28
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	1e-27
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	2e-27
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	9e-27
3nra_A	407	Aspartate aminotransferase; structural genomics, j	1e-26
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	2e-26
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	2e-26
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	8e-26
3ele_A	398	Amino transferase; RER070207001803, structural gen	1e-25
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	9e-25
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	1e-24
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	1e-24
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	1e-24
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	1e-24
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	1e-24
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	2e-23
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	5e-23
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	5e-23
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	6e-23
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	9e-22
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	2e-21
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	1e-20
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	3e-20
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	3e-20
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	4e-20
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	8e-20
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	1e-19
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	2e-19
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	8e-19
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	7e-18
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	1e-17
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	1e-17
1vp4_A	425	Aminotransferase, putative; structural genomics, j	1e-17
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	2e-17
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	3e-17
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	5e-17
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	7e-16
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	1e-15
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	3e-14
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	4e-14
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	1e-06
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	1e-06
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	3e-06
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	5e-06
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	7e-06
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	7e-06
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	4e-05
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	2e-04

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} Length = 363

 Score =  425 bits (1095), Expect = e-148
 Identities = 109/359 (30%), Positives = 175/359 (48%), Gaps = 12/359 (3%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYI 125
            +  L  L  Y+P    E +  +LG     I K+ +NENP G   +V            I
Sbjct: 6   WKKSLAGLSSYKPGKREEEVMAELGLT--KITKLSSNENPLGTSKKVAAIQANSSVETEI 63

Query: 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
           YPD  +  LR  +A    LE + ++   G DELI+L+ R +LD     V   PTF  Y  
Sbjct: 64  YPDGWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQ 123

Query: 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
           +A + GA V ++P   D   ++E + +A+  EK   +++ +PNNP G+ I   D+   L+
Sbjct: 124 NALIEGAEVREIPLLQDGEHDLEGMLNAI-DEKTTIVWICNPNNPTGNYIELADIQAFLD 182

Query: 246 -MP--ILVVLDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300
            +P  +LVVLDEAY E+   +     + V+ + NLI+ RTFSK  GLA  RVGYG     
Sbjct: 183 RVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKE 242

Query: 301 IIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYP 359
           II  L   + P+N +   +  A  A+++  ++   + +     ++     K    +  YP
Sbjct: 243 IIRQLNIVRPPFNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKLYP 302

Query: 360 SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 418
           +  NF+L ++  G++A  +   L K G + R          VR+++GK E   A++  L
Sbjct: 303 ANGNFVLIDL--GIEAGTIFSYLEKNGYITRSGAALGFPTAVRITIGKEEDNSAVIALL 359

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} Length = 367

 Score =  412 bits (1062), Expect = e-143
 Identities = 116/368 (31%), Positives = 177/368 (48%), Gaps = 30/368 (8%)

Query: 64  DSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL--K 121
           +  IR  +R +  Y                   +VK+DA ENPY  PP +R  L     +
Sbjct: 11  ERIIRDDVRAMGAYHV------------PDSHGLVKLDAMENPYRLPPALRSELAARLGE 58

Query: 122 FPY-IYPDPESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
                YP P S  LRA L +   + +   +L+G G+DE+I ++      PG K++   P 
Sbjct: 59  VALNRYPVPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPG 118

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           F MY   A   G   V VP ++DF+L+   +  A+   +P  ++L  PNNP G++ +  D
Sbjct: 119 FVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAAD 178

Query: 240 LLKILE------MPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
           +  I+          LVV+DEAY  F+  ES M  +    NL+V+RT SK  GLAG+R+G
Sbjct: 179 MEAIVRAAQGSVCRSLVVVDEAYQPFAQ-ESWMSRLTDFGNLLVMRTVSKL-GLAGIRLG 236

Query: 294 YGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDV 352
           Y A     +E L + + PYNV+V  E  A  AL++   L+     L  ER R+ + +   
Sbjct: 237 YVAGDPQWLEQLDKVRPPYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAH 296

Query: 353 PFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE--LKGYVRVSVGKPEH 410
             +  +PS +NF+L  V    DA +  D L    V+I++ +     L   +RV+V  PE 
Sbjct: 297 GGVTVFPSAANFLLARVP---DAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVSTPEE 353

Query: 411 TDALMECL 418
               +E  
Sbjct: 354 NAQFLEAF 361

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A* Length = 356

 Score =  408 bits (1051), Expect = e-142
 Identities = 107/366 (29%), Positives = 179/366 (48%), Gaps = 32/366 (8%)

Query: 64  DSFIRSHLRKLKPYQPILPFEVLSIQLGRKP--EDIVKIDANENPYGPPPEVREALGQLK 121
               R ++R L PYQ             R+      V ++ANE P     ++ +      
Sbjct: 7   TDLARENVRNLTPYQS-----------ARRLGGNGDVWLNANEYPTAVEFQLTQQTLN-- 53

Query: 122 FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTF 180
               YP+ + + +    A+ +G++ + +LV  GADE I+L++R   +PG D I+ CPPT+
Sbjct: 54  ---RYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTY 110

Query: 181 TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240
            MY   A   G     VP   ++ L+++ I+D ++    K +++ SPNNP G +IN +D 
Sbjct: 111 GMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQDF 168

Query: 241 LKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297
             +LE+     +VV DEAY EF    S   W+ ++ +L +LRT SK   LAGLR G+   
Sbjct: 169 RTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA 228

Query: 298 PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEVK---EALIKERERLFKLLKDVPF 354
              +I  L +   PY +S      A  AL     + ++     +I ERE L   LK++P 
Sbjct: 229 NEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPC 288

Query: 355 LNP-YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE-LKGYVRVSVGKPEHTD 412
           +   + S +N+IL        +  +   L   G+++R  N +  L G +R++VG  E + 
Sbjct: 289 VEQVFDSETNYILARFK---ASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVGTREESQ 345

Query: 413 ALMECL 418
            +++ L
Sbjct: 346 RVIDAL 351

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp} Length = 365

 Score =  405 bits (1042), Expect = e-140
 Identities = 103/363 (28%), Positives = 180/363 (49%), Gaps = 17/363 (4%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYI 125
               L  L  Y+P    EV++ + G K  +++K+ +NENP+G PP+  E L Q     ++
Sbjct: 4   FNEFLNNLSNYEPGKDIEVIAKEYGVK--EVIKLASNENPFGTPPKAIECLRQNANKAHL 61

Query: 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
           YPD     L++ LA+   +++++I++G G+D++I+  +   L+  +  +    TF MYE 
Sbjct: 62  YPDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEI 121

Query: 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
            A   GA   K    +      + + +   +++ K IFL  PNNP G  ++  +  + ++
Sbjct: 122 YAKQCGAKCYKTQSITHNLDEFKKLYETH-KDEIKLIFLCLPNNPLGECLDASEATEFIK 180

Query: 246 -MP--ILVVLDEAYTEFSGLE------SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296
            +    LVV+D AY EF+  +         E +K+ DN++ L TFSK  GL GLR+GYG 
Sbjct: 181 GVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGI 240

Query: 297 FPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFL 355
              +II   ++ + P+NVS  A  AA AA+ +  + E   E    + E   +  K    +
Sbjct: 241 ANANIISAFYKLRAPFNVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH-NI 299

Query: 356 NPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALM 415
               SY+NFI        ++  L + L K G++IR+  +  L   +R+++G     +   
Sbjct: 300 KIIDSYTNFITYFFD-EKNSTDLSEKLLKKGIIIRNLKSYGLN-AIRITIGTSYENEKFF 357

Query: 416 ECL 418
              
Sbjct: 358 TEF 360

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A* Length = 335

 Score =  385 bits (991), Expect = e-133
 Identities = 99/361 (27%), Positives = 170/361 (47%), Gaps = 38/361 (10%)

Query: 65  SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPY 124
           + +    ++  PY+              +  D   +  NENP+  P ++ + + +     
Sbjct: 2   NPLDLIAKRAYPYET-------------EKRDKTYLALNENPFPFPEDLVDEVFRRLNSD 48

Query: 125 ---IYPDPESRRLRAALAK---DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
              IY D     L   +        L  +++ VG GADE+I ++M       D+ V  PP
Sbjct: 49  ALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLM----FDRSVFFPP 104

Query: 179 TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238
           T++ Y   A   GA  ++VP   D  +        V   +   +F+ +PNNP G +   E
Sbjct: 105 TYSCYRIFAKAVGAKFLEVPLTKDLRI------PEVNVGEGDVVFIPNPNNPTGHVFERE 158

Query: 239 DLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
           ++ +IL+    V LDEAY EF G ES ++++KK++NL V+RTFSK   LA  RVGY    
Sbjct: 159 EIERILKTGAFVALDEAYYEFHG-ESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVAS 217

Query: 299 LSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYL-EVKEALIKERERLFKLLKDVPFLNP 357
              I+   R + P+NVS  +++ A  AL +     E  + +++ERER+   L+++ +   
Sbjct: 218 EKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMGY-RI 276

Query: 358 YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMEC 417
             S  NF+   +    + ++L + L    V +R +        VR+++GK E  D ++  
Sbjct: 277 TDSRGNFVFVFME-KEEKERLLEHLRTKNVAVRSFRE-----GVRITIGKREENDMILRE 330

Query: 418 L 418
           L
Sbjct: 331 L 331

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} Length = 361

 Score =  384 bits (990), Expect = e-132
 Identities = 88/340 (25%), Positives = 166/340 (48%), Gaps = 19/340 (5%)

Query: 91  GRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHI 149
             K  +++   +N NP G P      + + +K   +YPD   RRL  ++     L+   I
Sbjct: 22  VFKGRELLDYSSNINPLGIPKSFLNNIDEGIKNLGVYPDVNYRRLNKSIENYLKLKDIGI 81

Query: 150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVEL 209
           ++G GA E+I+L +       +KI+   P++  YE +A  +G +VV      +  ++ E 
Sbjct: 82  VLGNGASEIIELSISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYED 137

Query: 210 IADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-- 263
           I   +  +    + + +PNNP+G +IN E  + +L++       +++DEA+ EF+G    
Sbjct: 138 IISKI--DDVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSS 195

Query: 264 SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG-AFPLSIIEYLWRAKQPYNVSVAAEVAA 322
           S +  +K +  L ++R  +K   + G+R GYG      I   +   + P+N++  AE+AA
Sbjct: 196 SFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAA 255

Query: 323 CAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKD 380
              L++  Y+E     + KER+R  + L  + F+   +  ++NF+LC +   +  +KL D
Sbjct: 256 INCLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHANFVLCRLE-NISGEKLYD 314

Query: 381 DLAKMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECL 418
            L K  ++IR   N       +VR ++   +     +  L
Sbjct: 315 SLLKEDIVIRRCCNFIGLDDSFVRFAIKDEKKNTKFLRAL 354

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A Length = 369

 Score =  385 bits (990), Expect = e-132
 Identities = 93/369 (25%), Positives = 170/369 (46%), Gaps = 32/369 (8%)

Query: 64  DSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ---- 119
           D  +R  LR    Y               +    ++++ NENPY P   +   L      
Sbjct: 11  DLPLREELRGEHAYGA------------PQLNVDIRLNTNENPYPPSEALVADLVATVDK 58

Query: 120 -LKFPYIYPDPESRRLRAALAK------DSGLESDHILVGCGADELIDLIMRCVLDPGDK 172
                  YP+ ++  LR  LA          +  D++    G++E++  +++    PG  
Sbjct: 59  IATELNRYPERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRT 118

Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG 232
            +   P+++M+   A       + V R +DF +++++  + +  ++P  +F+T+PNNP G
Sbjct: 119 ALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTG 178

Query: 233 SIINDEDLLKILE-MPILVVLDEAYTEFSGLESRMEWVKKH-DNLIVLRTFSKRAGLAGL 290
            + + +D+ +I+   P +V++DEAY EFS   S    ++K+   L+V RT SK    AG 
Sbjct: 179 DVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGG 238

Query: 291 RVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYL-EVKEALIKERERLFKLL 349
           R+GY     + I+ +   + PY++S  ++ AA  AL++        E L  ER R+   L
Sbjct: 239 RLGYFVANPAFIDAVMLVRLPYHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARL 298

Query: 350 KDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPE 409
           +++ +    PS SNF+        D           GV+IR      + G++R ++G PE
Sbjct: 299 EELGY-AVVPSESNFVFFGD--FSDQHAAWQAFLDRGVLIRDVG---IAGHLRTTIGVPE 352

Query: 410 HTDALMECL 418
             DA ++  
Sbjct: 353 ENDAFLDAA 361

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15} Length = 360

 Score =  382 bits (984), Expect = e-132
 Identities = 103/362 (28%), Positives = 176/362 (48%), Gaps = 29/362 (8%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPED---IVKIDANENPYGPPPEVREALGQLKFP 123
           +R ++  +K Y P           G +P D    +K++ NENPY P PEV +A+ +   P
Sbjct: 6   LRQNIASMKGYIP-----------GYQPPDIASWIKLNTNENPYPPSPEVVKAILEELGP 54

Query: 124 Y-----IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
                 IYP   S++LR    +  G +   I++  G+DE+++ ++R     G++I    P
Sbjct: 55  DGAALRIYPSASSQKLREVAGELYGFDPSWIIMANGSDEVLNNLIRAFAAEGEEIGYVHP 114

Query: 179 TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238
           +++ Y   A V GA V       DF +          R + K  FLT+PN P G     E
Sbjct: 115 SYSYYGTLAEVQGARVRTFGLTGDFRIAGFPE-----RYEGKVFFLTTPNAPLGPSFPLE 169

Query: 239 DLLKILE-MPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297
            + ++      ++VLDE Y EF+   + +E V++H+N++V RT SK   LAG+R+G    
Sbjct: 170 YIDELARRCAGMLVLDETYAEFAE-SNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIA 228

Query: 298 PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLN 356
              +I  L + +  YN+   A+ A  AAL++  YL      + + RE     L+ + + +
Sbjct: 229 RPEVIAALDKIRDHYNLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSIGY-D 287

Query: 357 PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALME 416
             PS  N++        D K++ D L    V++RH+++  L   +R+S+G  E  +  + 
Sbjct: 288 VIPSQGNYLFATP-PDRDGKRVYDGLYARKVLVRHFSDPLLAHGMRISIGTREEMEQTLA 346

Query: 417 CL 418
            L
Sbjct: 347 AL 348

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A* Length = 364

 Score =  381 bits (981), Expect = e-131
 Identities = 90/357 (25%), Positives = 155/357 (43%), Gaps = 16/357 (4%)

Query: 73  KLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREAL-GQLKFPYIYPDPES 131
            L            +  LG  P+ ++   AN NP G P  V+ AL   L     YPD + 
Sbjct: 2   ALFNTAHGGNIREPATVLGISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDADY 61

Query: 132 RRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNG 191
             L  ALA+   + +  IL G G  E I  +   +     + +   P F  Y    A +G
Sbjct: 62  FHLHQALARHHQVPASWILAGNGETESIFTVASGL--KPRRAMIVTPGFAEYGRALAQSG 119

Query: 192 AAVVKVP-RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE----M 246
             + +   R++D     + I +A+      C+FL +PNNP G +     L  I +    +
Sbjct: 120 CEIRRWSLREADGWQLTDAILEALT-PDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSL 178

Query: 247 PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG-AFPLSIIEY 304
            I ++LDEA+ +F       +  +K + ++ VLR+ +K   + GLR+GY      + +  
Sbjct: 179 NINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMAR 238

Query: 305 LWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSN 363
           + R + P++V+  A +A   ALQ+  + +     L +E  R ++ L  +P L  YP  +N
Sbjct: 239 MRRQQMPWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVYPGRAN 298

Query: 364 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECL 418
           ++L       +   L+  L    ++IR   N       Y RV++      + L+  L
Sbjct: 299 YLLLRC--EREDIDLQRRLLTQRILIRSCANYPGLDSRYYRVAIRSAAQNERLLAAL 353

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis} Length = 350

 Score =  376 bits (967), Expect = e-129
 Identities = 77/336 (22%), Positives = 137/336 (40%), Gaps = 17/336 (5%)

Query: 90  LGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDH 148
           +     +IV         G    + + L + L     YP+P++  LR  LAK + ++++ 
Sbjct: 10  ITPLSSEIVNFSTTVWTDGDKDHLEKHLVENLNCIRHYPEPDAGTLRQMLAKRNSVDNNA 69

Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
           ILV  G       I +     G + +   P+F  YE    +    V   P   D      
Sbjct: 70  ILVTNGPTAAFYQIAQAF--RGSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDI----- 122

Query: 209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGLE-SR 265
                 +       +L +PNNPDG ++   ++L++L        VLD++Y  F+  E  R
Sbjct: 123 ---GEADFSNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIR 179

Query: 266 MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAA 325
              +K   NL+++ +FS   G+ GLR+GY       ++ +     P+ V+  A  AA   
Sbjct: 180 PADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFSTPWAVNALAIEAAKFI 239

Query: 326 LQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK 384
           L +P           +        L  +  +  +PS + F L  +  G  A+  K  L +
Sbjct: 240 LIHPAQFTLPIRKWQRNTVDFITALNRLDGVEVHPSGTTFFLLRLKKGTAAELKKYMLEE 299

Query: 385 MGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECL 418
             ++IR  +N     + YVR++  +P      ++ L
Sbjct: 300 YNMLIRDASNFRGLDESYVRITTQRPAQNQLFIKAL 335

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei} Length = 337

 Score =  366 bits (941), Expect = e-125
 Identities = 84/340 (24%), Positives = 144/340 (42%), Gaps = 13/340 (3%)

Query: 81  LPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALA 139
           +          R     V +  NENP    P V+ A+         YP     R+   LA
Sbjct: 2   MSVGEAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFDAEPRVMRKLA 61

Query: 140 KDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199
           +      D++++  G DE  D I         + V   P F  Y    AV+G    ++  
Sbjct: 62  EHFSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGL 119

Query: 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEF 259
             D  L+   +A      +  C+ L +P+NP G  ++  +L ++ +    +++DE Y ++
Sbjct: 120 TDDLLLDPNDLAQV---SRDDCVVLANPSNPTGQALSAGELDQLRQRAGKLLIDETYVDY 176

Query: 260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAE 319
           S   +R   +   +N +V R+FSK  GLAGLR+G    P  +I  + R +   NV     
Sbjct: 177 SSFRAR--GLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWFCNVGTLDL 234

Query: 320 VAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL 378
            A  AAL N    E      + +R R+   L+ + +     S +NF+L E       ++ 
Sbjct: 235 HALEAALDNDRAREAHIAKTLAQRRRVADALRGLGY-RVASSEANFVLVENA---AGERT 290

Query: 379 KDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 418
              L + G+ ++      L  ++R+S+G+ E  D L+  L
Sbjct: 291 LRFLRERGIQVKDAGQFGLHHHIRISIGREEDNDRLLAAL 330

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica} Length = 354

 Score =  337 bits (866), Expect = e-114
 Identities = 84/350 (24%), Positives = 155/350 (44%), Gaps = 16/350 (4%)

Query: 79  PILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAA 137
              P            ++ ++I+ NENP G  P+ + A    +     Y   E   L   
Sbjct: 2   ETQPESAAFTAPS--TDNPIRINFNENPLGMSPKAQAAARDAVVKANRYAKNEILMLGNK 59

Query: 138 LAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKV 197
           LA    +E+  IL+  G+ E I   +        ++V    T+   E  A + G  V KV
Sbjct: 60  LAAHHQVEAPSILLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKV 119

Query: 198 PRKSDFSLNVELIADAV-EREKPKCIFLTSPNNPDGSIINDEDLLKILE-MP--ILVVLD 253
               +++ ++E +  AV     P  ++L +PNNP G+I   + +   +   P   + ++D
Sbjct: 120 KMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVD 179

Query: 254 EAYTEF---SGLESRMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309
           EAY EF       S    + +  +N+I+L+TFSK   +AG+RVGY     ++I  + R  
Sbjct: 180 EAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYV 239

Query: 310 QPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCE 368
               ++ +   AA A++ +  ++   K++    R+ L K L+D+      PS  NF+  +
Sbjct: 240 AGEKINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDLKL-PYLPSEGNFVFHQ 298

Query: 369 VTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 418
           +   +  K  +  +A  GV+I          + R+S+G P+    + + +
Sbjct: 299 L--VVPLKDYQTHMADAGVLIGR-AFPPADNWCRISLGTPQEMQWVADTM 345

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A* Length = 391

 Score =  208 bits (530), Expect = 2e-63
 Identities = 60/331 (18%), Positives = 115/331 (34%), Gaps = 53/331 (16%)

Query: 126 YPDPESRRLRAALAK------DSGLESDHILVGCGADELIDLIMRCVLDPGD----KIVD 175
                   L  A+        ++  E  +I+VG G+ +L    +  +          +V 
Sbjct: 65  LCWFLEPELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVA 124

Query: 176 CPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235
             P ++ Y  +     + + K           E  A   +++ P    +TSPNNPDG+I 
Sbjct: 125 AAPFYSTYVEETTYVRSGMYKW----------EGDAWGFDKKGPYIELVTSPNNPDGTI- 173

Query: 236 NDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG 295
            +  + +  +    V+ D AY             ++ D+ I+L TFSK  G AG R+G+ 
Sbjct: 174 RETVVNRPDDDEAKVIHDFAYYWPHYTP----ITRRQDHDIMLFTFSKITGHAGSRIGWA 229

Query: 296 AFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN---------------PIYLEVKEALIK 340
                 +          N    ++ +     +                  +   +E +  
Sbjct: 230 LVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKN 289

Query: 341 ERERLFKLLKDVP---FLNPYPSYSNFILCEVTSG--------MDAKKLKDDLAKMGVMI 389
             E+L +++K+           ++ N+    + S          +   L  +L +  VM 
Sbjct: 290 RWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEETDLVSELRRHKVMS 349

Query: 390 RHYNNKEL-KGYVRVSVGKPEHT-DALMECL 418
           R        K +VRVS+   E   +  +E L
Sbjct: 350 RAGERCGSDKKHVRVSMLSREDVFNVFLERL 380

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A* Length = 375

 Score =  136 bits (344), Expect = 2e-36
 Identities = 63/315 (20%), Positives = 132/315 (41%), Gaps = 26/315 (8%)

Query: 110 PPEVREAL------GQLKFPYIYPDPESRRLRAALA-KDSGLESDHILVGCGADELIDLI 162
                E         +L + +I   P     + +++   +G++ + IL   GA     L+
Sbjct: 41  SGTNPEDFYKKLQGTKLNYGWIEGSPA---FKKSVSQLYTGVKPEQILQTNGATGANLLV 97

Query: 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPK 220
           +  +++PGD ++   PT+          GA V       ++ +  ++E +   + R   K
Sbjct: 98  LYSLIEPGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLI-RPTTK 156

Query: 221 CIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLI 276
            I + + NNP G++++   L +++E+       ++ DE Y  FS        ++ +D  I
Sbjct: 157 MICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSE-LDVPSIIEVYDKGI 215

Query: 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY---NVSVAAEVAACAALQNP--IY 331
            + + SK   L G+R+G+ A    + + L   +  Y      V  ++ A  AL +   I 
Sbjct: 216 AVNSLSKTYSLPGIRIGWVAANHQVTDILRDYRD-YTMICAGVFDDLVAQLALAHYQEIL 274

Query: 332 LEVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDL-AKMGVMI 389
              +  L +    L + +++ P ++   P+  +    ++   M  +     L  + GV++
Sbjct: 275 ERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDMPMEDFCLQLLQEHGVLL 334

Query: 390 RHYNNKELKGYVRVS 404
              N  E  GYVR+ 
Sbjct: 335 VPGNRFERDGYVRLG 349

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A* Length = 381

 Score =  123 bits (312), Expect = 6e-32
 Identities = 77/336 (22%), Positives = 134/336 (39%), Gaps = 47/336 (13%)

Query: 107 YGPPPEVREALGQ-LKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164
             PPP + EA+ + L     Y P      LR ALA++  +E + ++V  GA E + ++++
Sbjct: 37  NPPPPFLLEAVRRALGRQDQYAPPAGLPALREALAEEFAVEPESVVVTSGATEALYVLLQ 96

Query: 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP---RKSDFSLNVELIADAVEREKPKC 221
            ++ PGD++V   P F +Y  DA + GA    V        F L++  +  A+   + + 
Sbjct: 97  SLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKAL-TPRTRA 155

Query: 222 IFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTE--FSGLESRMEWVKKHDNL 275
           + L +P NP G +  + +L  I        + ++ DE Y E  +          +     
Sbjct: 156 LLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGE--------RPRRLR 207

Query: 276 IVL--RT-----FSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVA---AEVAACAA 325
                RT       KR    G RVG+   P   +  L   +Q +    A    +     A
Sbjct: 208 EFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQ-WTSFSAPTPLQAGVAEA 266

Query: 326 LQNP----IYLEVKEALIKERERLFKLLKDVPF--LNPYPSYSNFILCEVTSGMDAKKLK 379
           L+       Y  ++E   + R+ L   L+ +      P  +Y  F++ E+  G DA +L 
Sbjct: 267 LKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTY--FLMAEL-PGWDAFRL- 322

Query: 380 DDLAKMGVMI----RHYNNKELKGYVRVSVGKPEHT 411
             + +  V +      Y     K   R +  K E  
Sbjct: 323 --VEEARVALIPASAFYLEDPPKDLFRFAFCKTEEE 356

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} Length = 376

 Score =  117 bits (295), Expect = 1e-29
 Identities = 79/373 (21%), Positives = 146/373 (39%), Gaps = 49/373 (13%)

Query: 73  KLKPYQPILPFEVLS--IQLGRKPEDIVKIDANE-NPYGPPPE-VREALGQ-LKFPYIYP 127
             +PY    PFE L   ++     +    +D     P    P+ +++AL        IYP
Sbjct: 3   TFEPY----PFERLRALLKEITPKKRG--LDLGIGEPQFETPKFIQDALKNHTHSLNIYP 56

Query: 128 DPE-SRRLRAALAK------DSGLESDHILVGCGADELIDLIMRCVLD--PGDKIVDCPP 178
                  LRAA            L+ + ++   G+ E++      VL       I    P
Sbjct: 57  KSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNP 116

Query: 179 TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238
            + +YE  A    A  + +P   +      L  +  E ++   + L SPNNP G  ++ E
Sbjct: 117 FYQIYEGAAKFIKAKSLLMPLTKENDFTPSL--NEKELQEVDLVILNSPNNPTGRTLSLE 174

Query: 239 DLLKILEM----PILVVLDEAYTEF-------SGLESRMEWVKK-HDNLIVLRTFSKRAG 286
           +L+  +++      +++ DE Y+E        S LE+ M    +   N++V+ + SKR+ 
Sbjct: 175 ELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSS 234

Query: 287 LAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKER-E 343
             GLR G+ A    ++E     +    Y  + A + A+ AA  +  + E    +     +
Sbjct: 235 APGLRSGFIAGDSRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLK 294

Query: 344 RLFKLLKDVPFLNPYPSYSNFILCEVTSGMD-AKKLKDDLAKMGVMI---RHYNNKEL-K 398
              K+ K+         YS ++   V +G + AK L       G++     +     +  
Sbjct: 295 LARKIFKNTLI----YPYSFYVYLPVQNGENFAKTL---YQNEGIITLPALYLGRNRIGA 347

Query: 399 GYVRVSVGKPEHT 411
            YVR+++      
Sbjct: 348 DYVRLALVYDTPL 360

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1 Length = 386

 Score =  116 bits (293), Expect = 3e-29
 Identities = 71/343 (20%), Positives = 135/343 (39%), Gaps = 51/343 (14%)

Query: 109 PPPEVREALGQ--LKFPYIY-PDPESRRLRAALA----KDSGLESD---HILVGCGADEL 158
            P  ++E L     +    Y P    + LR A+A    +  G + D    I V  GA E 
Sbjct: 44  GPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEA 103

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNVELIADAVERE 217
           +   +  ++  GD+++   P++  Y    A++G  V ++  +   F ++ +  A  +  E
Sbjct: 104 LYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALL-SE 162

Query: 218 KPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTE--FSGLESRMEWVKK 271
           + + + L +P+NP  ++    D   +        I V+ DE Y    FS         + 
Sbjct: 163 RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQ--------QG 214

Query: 272 HDNLIVL-----RT-----FSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAE 319
           H +++       R      F K   + G +VGY   P  I   + +  Q   ++V+  A+
Sbjct: 215 HASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQ 274

Query: 320 VAACAALQNPI--YLEVKEALIKERERLFKLLKDVPF--LNPYPSYSNFILCEVT--SGM 373
           +A    L+     YL + +   ++R+ L   L +     L    +Y  F+L + +  S +
Sbjct: 275 LALADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILPCEGTY--FLLVDYSAVSTL 332

Query: 374 DAKKLKDDLAK-MGVMI----RHYNNKELKGYVRVSVGKPEHT 411
           D  +    L +  GV          +      +R+   K E T
Sbjct: 333 DDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKEST 375

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3} Length = 391

 Score =  114 bits (289), Expect = 1e-28
 Identities = 62/349 (17%), Positives = 113/349 (32%), Gaps = 71/349 (20%)

Query: 80  ILPFEVLSI-----QLGRKPEDIVKIDANENPYGPPPEVREAL------GQLKFPYIYPD 128
           + PF V+ +     +       I+ ++  +   G P    EAL        L     Y  
Sbjct: 11  VDPFIVMDVMEAARRAEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETDALG----YTV 66

Query: 129 ----PESRRLRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
               P    LR  +A    +  G++     +++  G+     L    + D GD++    P
Sbjct: 67  ALGLPA---LRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAP 123

Query: 179 TFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236
            +  Y       G   V +P   ++                    + + SP NP G++++
Sbjct: 124 GYPSYRQILRALGLVPVDLPTAPENRLQPVPA----DFAGLDLAGLMVASPANPTGTMLD 179

Query: 237 DEDLLKI----LEMPILVVLDEAY-------TEFSGLESRMEWVKKHDNLIVLRTFSKRA 285
              +  +           + DE Y          + LE         D   V+ +FSK  
Sbjct: 180 HAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELT-------DECYVINSFSKYF 232

Query: 286 GLAGLRVGYGAFPLSIIEYLWRAKQPY--NVSVAAEVAACAALQNPIYLE-VKEALIKER 342
            + G RVG+   P   +  + R  Q        A++VAA AAL     L+   +     R
Sbjct: 233 SMTGWRVGWMVVPEDQVRVVERIAQNMFICAPHASQVAALAALDCDAELQANLDVYKANR 292

Query: 343 ERLFKLLKDVPFLNP---------YPSYSNFILCEVTSGMDAKKLKDDL 382
           + + + L    F            Y   S+          D++    ++
Sbjct: 293 KLMLERLPKAGFTRIAPPDGAFYVYADVSDL-------TDDSRAFAAEI 334

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus} Length = 376

 Score =  113 bits (285), Expect = 4e-28
 Identities = 63/331 (19%), Positives = 121/331 (36%), Gaps = 36/331 (10%)

Query: 109 PPPEVREALGQ-LKFP--YIYPDPE-SRRLRAALA----KDSGLESD---HILVGCGADE 157
           PP    +AL + L  P  Y Y     +       A       G+  D     L   G+ E
Sbjct: 39  PPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQE 98

Query: 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE 217
            +  ++  + +P D ++     +  Y   A V       +P + D   +++ + + V   
Sbjct: 99  GLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGV-WR 157

Query: 218 KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE----SRMEWV 269
           + K + L  PNNP G++ +     + L +     + ++ D  Y +    E    S +   
Sbjct: 158 EAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQ-VYEGEAPSPLALP 216

Query: 270 KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQ 327
              + ++ L + SK   LAG R+G+       +  L R K    +N           AL+
Sbjct: 217 GAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERVKGVIDFNQYAGVLRMGVEALK 276

Query: 328 NP--IYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKM 385
            P  +         +    + + LK V      P  + ++   +  G+D  +    L + 
Sbjct: 277 TPKEVVRGYARVYRERALGMAEALKGV-LSLLPPRATMYLWGRLPEGVDDLEFGLRLVER 335

Query: 386 GVMIR------HYNNKELKGYVRVSVGKPEH 410
           GV +              KG+VR+++ +P  
Sbjct: 336 GVALAPGRGFGPGG----KGFVRIALVRPLE 362

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus} Length = 404

 Score =  113 bits (285), Expect = 5e-28
 Identities = 73/405 (18%), Positives = 139/405 (34%), Gaps = 56/405 (13%)

Query: 44  MSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPF-EVLSIQLGRKPEDIVKID- 101
           M S+       +    R  G   I + L  +        F + +  ++   P  +  I+ 
Sbjct: 1   MGSSHHHHHHSSGLVPR--GSHMISNKLANIPDS----YFGKTMGRKIEHGPLPL--INM 52

Query: 102 ANENP-YGPPPEVREALGQ-LKFP--YIYPDPE-SRRLRAALA----KDSGLESD---HI 149
           A   P    P  + +   + L  P    Y         + A+     +   +  D    +
Sbjct: 53  AVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEV 112

Query: 150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNVE 208
            +  G    +  +  CV++PGD ++   P +T Y     +     V +      +  +  
Sbjct: 113 CILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWS 172

Query: 209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE- 263
            +   +  +K K I+LT PNNP GS    E   + +         +V D AY  F G + 
Sbjct: 173 KVDSQI-IDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAF-GFDA 230

Query: 264 ---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAA 318
              S +      D  I + + SK   ++G RVG+      +I+ L + +      +  A 
Sbjct: 231 KNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTHTNAGMFGAL 290

Query: 319 EVAACAALQNP--IYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMD-- 374
           + AA  AL +      E        R+R   +L        +     ++  E   G D  
Sbjct: 291 QDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKADLPFVHAKGGIYVWLETPPGYDSE 350

Query: 375 --AKKLKDDLAKMGVMI-------RHYNNKELKGYVRVSVGKPEH 410
              + L   + +  +++        +        YVR+S+   + 
Sbjct: 351 QFEQFL---VQEKSILVAPGKPFGENG-----NRYVRISLALDDQ 387

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A* Length = 427

 Score =  113 bits (284), Expect = 6e-28
 Identities = 51/333 (15%), Positives = 99/333 (29%), Gaps = 73/333 (21%)

Query: 126 YPDPESRRLRAALAKDSGL---ESDHILVGCGADELIDLIMR--------CVLDPGDKIV 174
           +   E  +    L +  G    +  +I+ G G  +LI  ++             P  K+V
Sbjct: 100 FISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVV 159

Query: 175 DCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234
              P + ++                   ++ N     +     +     +TSPNNP+G +
Sbjct: 160 AHAPFYPVFREQTKYFDKKGYV------WAGNAANYVNVS-NPEQYIEMVTSPNNPEGLL 212

Query: 235 INDEDLLKILEMPILVVLDEAY--TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRV 292
                ++K        + D  Y    ++ ++       K D  I+L T SK  G +G R 
Sbjct: 213 --RHAVIKG----CKSIYDMVYYWPHYTPIKY------KADEDILLFTMSKFTGHSGSRF 260

Query: 293 GYGAF-PLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNP-------------IYLEVKE 336
           G+      S+   L               ++ +   L+               +     +
Sbjct: 261 GWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFK 320

Query: 337 ALIKERERLFKLLKDVPFLN----PYPSYSNFIL-------------CEVTSGMDAKKLK 379
            L +    +  LL      +    P   Y N+               CE     D  +  
Sbjct: 321 KLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCYQT- 379

Query: 380 DDLAKMGVMIR---HYNNKELKGYVRVSVGKPE 409
                  +  +    +       YVR+S+ K +
Sbjct: 380 --FQNGRINTQNGVGFEASS--RYVRLSLIKTQ 408

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis} Length = 437

 Score =  112 bits (283), Expect = 1e-27
 Identities = 51/353 (14%), Positives = 102/353 (28%), Gaps = 81/353 (22%)

Query: 94  PEDIVK-----IDANENPYGPP----PEVREALGQLKFPYIYPDPESRRLRAALAKDSGL 144
           P+  ++     +        P     PE+++               SR  +        +
Sbjct: 59  PQIGIETEIQKLREGVASIYPNLDGLPELKQEA-------------SRFAK----LFVNI 101

Query: 145 E--SDHILVGCGADELIDLIM----RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP 198
           +  +   +   G+ +   +      R   +     +   P F + +    + G       
Sbjct: 102 DIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFD 161

Query: 199 --RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVL 252
                   L  +L +      +   I  ++PNNP    + DE+L  I E+     ++V+ 
Sbjct: 162 LFEYRGEKLREKLESYLQT-GQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIE 220

Query: 253 DEAYTEFSGLESRMEWVKKH----------DNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302
           D AY              +           DN I+  + SK    AG R+G       + 
Sbjct: 221 DLAYFGMD-FRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLY 279

Query: 303 EYLWRAKQPY--------------------NVSVAAEVAACAALQNP-----IYLEVKEA 337
           E  +   +                        + +A+    A L+        + +    
Sbjct: 280 EREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIE 339

Query: 338 LIKERERLFKLLKDVPFLNPYPSYSN------FILCEVTSGMDAKKLKDDLAK 384
             ++   + K+  D  F   Y    N      F       GMD+ KL +   +
Sbjct: 340 YGRKARIMKKMFLDNGFNIVYDKDGNEPLADGFYFTVGYKGMDSSKLIEKFVR 392

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis} Length = 411

 Score =  111 bits (281), Expect = 2e-27
 Identities = 70/300 (23%), Positives = 123/300 (41%), Gaps = 46/300 (15%)

Query: 107 YGPPPEVREALGQ--LKFPYIY-PDPESRRLRAALA----KDSGLESD---HILVGCGAD 156
              PP++ +A           Y P P S  LR A+A    +  G++ D    +LV  GA 
Sbjct: 37  EDGPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGAT 96

Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP---RKSDFSLNVELIADA 213
           E I   +  +++PG +++   P +  Y    A+ GA  V VP       F+L+ + +  A
Sbjct: 97  EAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRA 156

Query: 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTE--FSGLESRME 267
           V   + + + + SP+NP G++++  +L  I    +   ++V+ DE Y    F        
Sbjct: 157 V-TPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDH------ 209

Query: 268 WVKKHDNLIVL-----RT-----FSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVS 315
              +H  L        RT      +K     G ++G+   P  +I  +  AKQ   Y   
Sbjct: 210 --ARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAELIAGVRAAKQYLSYVGG 267

Query: 316 VAAEVAACAALQNP--IYLEVKEALIKERERLFKLLKDVPF--LNPYPSYSNFILCEVTS 371
              + A   AL         ++ +L   R+RL   L ++ F   + Y +Y  F+  +   
Sbjct: 268 APFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEIGFAVHDSYGTY--FLCADPRP 325

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1 Length = 409

 Score =  109 bits (276), Expect = 9e-27
 Identities = 60/337 (17%), Positives = 125/337 (37%), Gaps = 56/337 (16%)

Query: 110 PPEVREALGQLKFPYI-YPD----PESRRLRAALA----KDSGLE--SDHILVGCGADEL 158
           P    E + + K   + Y       E   LR A A    +   ++   +++LV  G  E 
Sbjct: 58  PEVFFERIYENKPEVVYYSHSAGIWE---LREAFASYYKRRQRVDVKPENVLVTNGGSEA 114

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVER 216
           I      + +PGD+I+   P +  Y   A + G  ++ V    +  F++  + +   +  
Sbjct: 115 ILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFIN- 172

Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTEFSGLESRMEWVKKH 272
           E+ K I L++P NP G +   +++  +        + +++DE Y+E         +  + 
Sbjct: 173 ERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIV-------FRGEF 225

Query: 273 --------DNLIVLRTFSKRAGLAGLRVGY-GAFPLSIIEYLWRAKQPY--NVSVAAEVA 321
                   D ++V+ + SK+    G RVG        +I +  +  Q       +  ++ 
Sbjct: 226 ASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKLAQ-GRLAPPLLEQIG 284

Query: 322 ACAALQNP--IYLEVKEALIKERERLFKLLKDVPFLN-PYPS---YSNFILCEVTSGMD- 374
           +   L      +  V+E   +  E + K L++        PS   Y       V    + 
Sbjct: 285 SVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYI-TAELPVEDAEEF 343

Query: 375 AKKL--KDDLAKMGVMIRH-----YNNKELKGYVRVS 404
           A+ +    ++     M+             K  +R++
Sbjct: 344 ARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIA 380

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides} Length = 407

 Score =  109 bits (274), Expect = 1e-26
 Identities = 44/274 (16%), Positives = 90/274 (32%), Gaps = 48/274 (17%)

Query: 134 LRAALA----KDSGLE---SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           +R  LA      +G      D +++  G    + L +   +  GDK+    P +      
Sbjct: 83  IRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKL 142

Query: 187 AAVNGAAVVKVPRKS------DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240
                  +V V             L++  + +A  +   +    ++PNNP G + + E++
Sbjct: 143 VEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAF-KAGARVFLFSNPNNPAGVVYSAEEI 201

Query: 241 LKI----LEMPILVVLDEAY-------TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG 289
            +I          V+ D+ Y         ++ L +        +N++ +   SK   L+G
Sbjct: 202 GQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDA--ENVVTIMGPSKTESLSG 259

Query: 290 LRVGYGAFPLSIIEYLWRAK-QPY---NVSVAAEVAACAALQNPIYLEVKEALIKE---- 341
            R+G      +II  +   K Q       +  ++                E  I      
Sbjct: 260 YRLGVAFGSRAIIARM--EKLQAIVSLRAAGYSQAVLRGWFDEA--PGWMEDRIARHQAI 315

Query: 342 RERLFKLLKDVPFL---NP------YPSYSNFIL 366
           R+ L  +L+    +    P      +P      +
Sbjct: 316 RDELLHVLRGCEGVFARTPQAGSYLFPRLPKLAV 349

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A* Length = 389

 Score =  108 bits (273), Expect = 2e-26
 Identities = 69/266 (25%), Positives = 120/266 (45%), Gaps = 36/266 (13%)

Query: 134 LRAA----LAKDSGLE---SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           LR A    L K +G+E      I+V  GA++   + +   L  G++++   P F  Y   
Sbjct: 68  LREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPA 127

Query: 187 AAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI- 243
             + G   V+VP   + +F LNV+ +   V  +K + + + SP NP G+++  +DL +I 
Sbjct: 128 VILAGGKPVEVPTYEEDEFRLNVDELKKYVT-DKTRALIINSPCNPTGAVLTKKDLEEIA 186

Query: 244 ---LEMPILVVLDEAYTE--FSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296
              +E  ++V+ DE Y    +      S        +  I +  FSK   + G R+G+ A
Sbjct: 187 DFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVA 246

Query: 297 FPLSIIEYLWRAK-QPYNVSVA---AEVAACAALQNPIYLEVKEALIKE----RERLFKL 348
            P  IIE +   K Q YN +      + AA  AL++    +  E + KE    R+ ++K 
Sbjct: 247 APSWIIERM--VKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKR 304

Query: 349 LKDVPF--LNP------YPSYSNFIL 366
           L ++    + P      +P   +  L
Sbjct: 305 LNEMGLPTVKPKGAFYIFPRIRDTGL 330

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A* Length = 428

 Score =  108 bits (273), Expect = 2e-26
 Identities = 59/284 (20%), Positives = 109/284 (38%), Gaps = 40/284 (14%)

Query: 114 REALGQLKFPYIYPDPE-SRRLRAALAK--------DSGLESDHILVGCGADELIDLIMR 164
            E +   K    + D       R A+AK            + + +++  GA    + I+ 
Sbjct: 67  SEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIF 126

Query: 165 CVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVPRKS--DFSLNVELIADAVERE---- 217
           C+ DPGD  +   P +  +  D     G  ++ +  +S  +F +  + + +A E      
Sbjct: 127 CLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSN 186

Query: 218 -KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTE--FSG--------- 261
            K K + LT+P+NP G+ ++ + L  +L       I +V DE Y    F           
Sbjct: 187 IKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEI 246

Query: 262 LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG-AFPLSIIEYLWRAKQPYNVSVA--A 318
           L+ +       D + ++ + SK  GL G RVG   +F   ++    +      VS     
Sbjct: 247 LDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQY 306

Query: 319 EVAACAALQNPI--YL-EVKEALIKERERLFKLLKD--VPFLNP 357
            +AA  + +  +  +L E    L K  +     L+   +  L  
Sbjct: 307 FLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKN 350

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa} Length = 412

 Score =  107 bits (269), Expect = 8e-26
 Identities = 61/244 (25%), Positives = 103/244 (42%), Gaps = 24/244 (9%)

Query: 109 PPPEVREALGQ-LKFP--YIYPDPE-SRRLRAALA----KDSGLESD---HILVGCGADE 157
            PP + E L    +    + Y       RLR A++        ++ D     +V  G+ E
Sbjct: 51  TPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKE 110

Query: 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVE 215
            +  +M   LD GD I+   P++ ++ + A + GA V  VP     DF   +E       
Sbjct: 111 GLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRES- 169

Query: 216 REKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTE--FSGLE--SRME 267
             KP+ + L  P+NP    +  +   +++ +     ++VV D AY +  + G +  S M+
Sbjct: 170 IPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQ 229

Query: 268 WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAA 325
                D  +   T SK   +AG R+G+      ++  L R K    Y      +VAA AA
Sbjct: 230 VPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAA 289

Query: 326 LQNP 329
           L+  
Sbjct: 290 LEGD 293

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale} Length = 398

 Score =  106 bits (267), Expect = 1e-25
 Identities = 51/251 (20%), Positives = 102/251 (40%), Gaps = 36/251 (14%)

Query: 134 LRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFD 186
            RAA+A       G    +D++ +  GA   + +  R +     D+ +   P F  Y+  
Sbjct: 81  TRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVF 140

Query: 187 AAVNGAAVVKVP-RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
               GA +V+VP     F ++ + + + +     + + + SPNNP G++ ++E + K+ +
Sbjct: 141 VNAAGARLVEVPADTEHFQIDFDALEERIN-AHTRGVIINSPNNPSGTVYSEETIKKLSD 199

Query: 246 M----------PILVVLDEAYTE--FSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRV 292
           +          PI ++ DE Y E  + G++   +      DN +V  ++SK   L G R+
Sbjct: 200 LLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYY--DNTLVCYSYSKSLSLPGERI 257

Query: 293 GYGAFPLSIIE------YLWRAKQPYNVSVA---AEVAACAALQNPIYLEVKEALIKERE 343
           GY   P  + +       +  A +      A    +                 A  + R+
Sbjct: 258 GYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGAT---GDINAYKENRD 314

Query: 344 RLFKLLKDVPF 354
            L++ L  + +
Sbjct: 315 LLYEGLTRIGY 325

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491} Length = 396

 Score =  104 bits (261), Expect = 9e-25
 Identities = 87/389 (22%), Positives = 162/389 (41%), Gaps = 59/389 (15%)

Query: 71  LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANE-------NPYGPPPE-VREALGQ-LK 121
           L++LKPY    PF     +L    + I   +  E        P  P P+ + +AL   L 
Sbjct: 6   LKQLKPY----PFA----RLHEAMQGISAPEGMEAVPLHIGEPKHPTPKVITDALTASLH 57

Query: 122 FPYIYPDPE-SRRLRAALA-------KDSGLESD-HILVGCGADELIDLIMRCVLDP--- 169
               YP       LR A A           +++D  IL   G+ E +   ++ VL+P   
Sbjct: 58  ELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSD 117

Query: 170 --GDKIVDCP-PTFTMYEFDAAVNGAAVVKVP-RKSDFSLNVELIADAVEREKPKCIFLT 225
                IV  P P + +YE    + G  +         F+ +   I++ V  ++ K +F+ 
Sbjct: 118 GIKPAIV-SPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEV-WKRTKLVFVC 175

Query: 226 SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEF--------SGLESRMEWVKKHD 273
           SPNNP GS+++ +   ++ ++      ++  DE Y+E           L++  +  +   
Sbjct: 176 SPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQ 235

Query: 274 NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIY 331
            L++  + SKR+ + GLR G+ A    +++     +      +S+  + A+ AA  +  +
Sbjct: 236 KLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSAMSIPVQRASIAAWDDEQH 295

Query: 332 LEVKEALIKER-ERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGV--- 387
           +     L +E+ ER+  +L+ V F    P  S +I  +V  G D    ++   K  +   
Sbjct: 296 VIDNRRLYQEKFERVIPILQQV-FDVKLPDASFYIWLKVPDGDDLAFARNLWQKAAIQVL 354

Query: 388 ----MIRHYNNKEL-KGYVRVSVGKPEHT 411
               + R        +GYVR+++     T
Sbjct: 355 PGRFLARDTEQGNPGEGYVRIALVADVAT 383

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A* Length = 429

 Score =  104 bits (261), Expect = 1e-24
 Identities = 61/317 (19%), Positives = 111/317 (35%), Gaps = 63/317 (19%)

Query: 107 YGPPPEVREALGQ-----LKFPYIY-PDPESRRLRAALA----KDSGLESD---HILVGC 153
           Y  P     AL             Y       RL  AL+    +      +    +LV  
Sbjct: 49  YHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTV 108

Query: 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP----------RKSDF 203
           GA E +   ++  +D GD+++   P F  YE      G     +P            +D+
Sbjct: 109 GAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADW 168

Query: 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTE- 258
            L+   +      EK K I + +P+NP G +++  +L  +     +  +L V DE Y   
Sbjct: 169 VLDNNELEALF-NEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHM 227

Query: 259 -FSGLESRMEWVKKHDNLIVL-----RT-----FSKRAGLAGLRVGYGAFPLSIIEYLWR 307
            F           +H  +  L     RT       K   L G ++G+   P ++++ L  
Sbjct: 228 VFEP--------FEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLKNLQM 279

Query: 308 AKQ--PYNVSVAAEVAACAALQNPI---------YLEVKEALIKERERLFKLLKDVPF-- 354
             Q   Y  +   + A     +  +         +  +   L+ +R+ +   L +V    
Sbjct: 280 VHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNP 339

Query: 355 LNPYPSYSNFILCEVTS 371
             P   Y  F++ + +S
Sbjct: 340 TVPQGGY--FMVADWSS 354

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii} Length = 370

 Score =  103 bits (259), Expect = 1e-24
 Identities = 52/243 (21%), Positives = 97/243 (39%), Gaps = 37/243 (15%)

Query: 134 LRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA 187
           LR  ++         +   D+I++  G+   +   +  ++D GD+++   P +  Y+   
Sbjct: 71  LREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFI 130

Query: 188 AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP 247
              GA  V           VE + +A+  +K K I + SP+NP G +I+ E      E  
Sbjct: 131 RFLGAKPVFCD------FTVESLEEAL-SDKTKAIIINSPSNPLGEVIDREIYEFAYENI 183

Query: 248 ILVVLDEAYTEFSGLESRMEWVKKH----------DNLIVLRTFSKRAGLAGLRVGYGAF 297
             ++ DE Y       + + +  K           +  I++  FSK   + G R+GY   
Sbjct: 184 PYIISDEIY-------NGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVIS 236

Query: 298 PLSIIEYLWRAKQPYNVSVA---AEVAACAALQNPIYLEVKE---ALIKERERLFKLLKD 351
              IIE + + +Q      A   ++ AA  A +     E+        + R  + K +KD
Sbjct: 237 NDEIIEAILKLQQ-NLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKD 295

Query: 352 VPF 354
             +
Sbjct: 296 FGW 298

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A* Length = 422

 Score =  103 bits (260), Expect = 1e-24
 Identities = 60/318 (18%), Positives = 121/318 (38%), Gaps = 64/318 (20%)

Query: 107 YGPPPEVREALGQ-LKFPYIY----PDPESRRLRAALA----KDSGLESD---HILVGCG 154
           + PP    EA    +   ++            L   LA    +  G E D   ++LV  G
Sbjct: 40  FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVG 99

Query: 155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP------------RKSD 202
               +    + ++D GD+++   P F  YE    + G   V V               S+
Sbjct: 100 GYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSN 159

Query: 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTE 258
           + L+   +A      + K + L +PNNP G + + E+L  +     +  ++ + DE Y  
Sbjct: 160 WQLDPMELAGKF-TSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQW 218

Query: 259 --FSGLESRMEWVKKHDNLIVL-----RT-----FSKRAGLAGLRVGYGAFPLSIIEYLW 306
             + G         +H ++  L     RT       K     G +VG+   P  I+++L 
Sbjct: 219 MVYDG--------HQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLR 270

Query: 307 RAKQ--PYNVSVAAEVAACAALQNPI---------YLEVKEALIKERERLFKLLKDVPF- 354
              Q   ++    ++ A   + +            +++  +A+ + R+ + + L+ V   
Sbjct: 271 TVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLK 330

Query: 355 -LNPYPSYSNFILCEVTS 371
            + P  SY  F++ +++ 
Sbjct: 331 PIIPQGSY--FLITDISD 346

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} PDB: 2zjg_A* 3e2f_A* 3e2z_A* Length = 410

 Score =  103 bits (259), Expect = 1e-24
 Identities = 71/316 (22%), Positives = 123/316 (38%), Gaps = 62/316 (19%)

Query: 107 YGPPPEVREALGQ---LKFPYIYPDPESR-RLRAALA----KDSGLESD---HILVGCGA 155
             PP  V+E L +   +     Y        L  AL+    K    + D    ILV  GA
Sbjct: 35  ISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGA 94

Query: 156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-----------RKSDFS 204
              +   ++ ++DPGD+++   P +  YE    + GA  V +P             SD++
Sbjct: 95  YGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWT 154

Query: 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTE-- 258
            +   +       K K I L +P+NP G +   ++L  I    ++   L + DE Y    
Sbjct: 155 FDPRELESKF-SSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLV 213

Query: 259 FSGLESRMEWVKKHDNLIVL-----RT-----FSKRAGLAGLRVGYGAFPLSIIEYLWRA 308
           ++G          H  +  L     RT       K   + G ++G+   P  +I++L   
Sbjct: 214 YTG--------HTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIKHLQTV 265

Query: 309 KQ--PYNVSVAAEVAACAALQNPI---------YLEVKEALIKERERLFKLLKDVPF--L 355
           +Q   Y  +   + A   A    I         +  + + L  +R+R+ +LL  V    +
Sbjct: 266 QQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSVGLKPI 325

Query: 356 NPYPSYSNFILCEVTS 371
            P   Y  FI+ +V+S
Sbjct: 326 VPDGGY--FIIADVSS 339

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A* Length = 435

 Score =  103 bits (260), Expect = 1e-24
 Identities = 51/275 (18%), Positives = 104/275 (37%), Gaps = 44/275 (16%)

Query: 126 YPDPE-SRRLRAALAK------DSGL--ESDHILVGCGADELIDLIMRCVLDPGDKIVDC 176
           + D       + A+         + +  + +H+++  GA    +  + C+ DPG+ ++  
Sbjct: 82  FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIP 141

Query: 177 PPTFTMYEFDAAV-NGAAVVKVPRKS--DFSLNVELIADAVERE-----KPKCIFLTSPN 228
            P +  ++ D     G  +V +   S   F +    + +A +       + K + +T+P+
Sbjct: 142 TPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPS 201

Query: 229 NPDGSIINDEDLLKILEM----PILVVLDEAY-------------TEFSGLESRMEWVKK 271
           NP G+ +   +L  +L       I ++ DE Y              E     +  E  + 
Sbjct: 202 NPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEV 261

Query: 272 HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPYNVSVAAEVAACAAL---- 326
              + V+ + SK  GL G RVG        ++    +      VS   +    A L    
Sbjct: 262 WQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKK 321

Query: 327 --QNPIYLEVKEALIKERERLFKLLKD--VPFLNP 357
             +N I  E  + L + +++L   L+   +  LN 
Sbjct: 322 LTKNYI-AENHKRLKQRQKKLVSGLQKSGISCLNG 355

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A* Length = 427

 Score =  100 bits (251), Expect = 2e-23
 Identities = 73/414 (17%), Positives = 146/414 (35%), Gaps = 73/414 (17%)

Query: 45  SSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANE 104
           SS + +  +    Q      S   S + K     PI              + ++ +   +
Sbjct: 8   SSGVDLGTENLYFQSMW---SVRPSDMAKKTFN-PIRAIVDNMKVKPNPNKTMISLSIGD 63

Query: 105 -NPYG---PPPEVREAL------GQLKFPYIYPD----PESRRLRAALA-----KDSGLE 145
              +G     PEV +A+      G+      Y            R  +A      ++ LE
Sbjct: 64  PTVFGNLPTDPEVTQAMKDALDSGKYNG---YAPSIGFLS---SREEIASYYHCPEAPLE 117

Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCP-PTFTMYEFDAAVNGAAVVKVP--RKSD 202
           +  +++  G  + IDL +  + +PG  I+  P P F++Y+  A   G  V       +  
Sbjct: 118 AKDVILTSGCSQAIDLCLAVLANPGQNIL-VPRPGFSLYKTLAESMGIEVKLYNLLPEKS 176

Query: 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAY-- 256
           + ++++ +   ++ EK  C+ + +P+NP GS+ +   L KIL +     + ++ DE Y  
Sbjct: 177 WEIDLKQLEYLID-EKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGD 235

Query: 257 -----TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY-------GAFPLSIIEY 304
                 ++  L +    +     ++     +KR  + G R+G+         F   I + 
Sbjct: 236 MVFSDCKYEPLAT----LSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDG 291

Query: 305 LWRAKQP-YNVSVAAEVAACAALQNP---IYLEVKEALIKERERLFKLLKDVPFLNP--- 357
           L +  Q         + A  + L       Y      L    +  +  L  +P L P   
Sbjct: 292 LVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRP 351

Query: 358 ------YPSYSNFILCEVTSGMD-AKKLKDDLAKMGVMIRHYNNKELKGYVRVS 404
                           E  + ++  ++L   +A+  V        E   ++RV 
Sbjct: 352 SGAMYLMVGIEMEHFPEFENDVEFTERL---VAEQSVHCLPATCFEYPNFIRVV 402

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1 Length = 406

 Score = 99.2 bits (248), Expect = 5e-23
 Identities = 80/352 (22%), Positives = 142/352 (40%), Gaps = 67/352 (19%)

Query: 94  PEDIVK-----IDANENPYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE 145
           PE + +     I    N YG     PE+R+A+ +                    + +G++
Sbjct: 56  PEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVE-----------------REKRKNGVD 98

Query: 146 --SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKS 201
              D + V     E + LI   +LDPGD+I+   P++  Y       G   V+     + 
Sbjct: 99  ITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEE 158

Query: 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYT 257
           D+  +++ I   +  ++ K I + +PNNP G++ + + L +IL +     I V+ DE Y 
Sbjct: 159 DWQPDIDDIRKKIT-DRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIY- 216

Query: 258 EFSGLESRMEWVKKH---------DNLIVLRTFSKRAGLAGLRVGYGAF--PLSIIEYLW 306
                   M +  +H           +IV+   SK     G R+GY  F  P + +  + 
Sbjct: 217 ------DLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVR 270

Query: 307 RA--KQPY---NVSVAAEVAACAALQNPI--YLEVKEALIKERERLFKLLKDVPFLN-PY 358
            A  +        +  A+ AA A L  P+    E  + L + R+ ++K L ++P ++   
Sbjct: 271 EAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGISTTK 330

Query: 359 PS---YSNFILCEVTSGMDAKKLKDD-LAKMGVMIRHYN--NKELKGYVRVS 404
           P    Y  F   EV    + K+   D L    V+  H +   +   G+ R  
Sbjct: 331 PQGAFYI-FPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAV 381

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1 Length = 416

 Score = 99.2 bits (248), Expect = 5e-23
 Identities = 58/340 (17%), Positives = 119/340 (35%), Gaps = 49/340 (14%)

Query: 101 DANENPYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADE 157
               N Y P    PE REA+    +                   S +  D++++  G   
Sbjct: 65  SQECNGYFPTVGSPEAREAVAT-WW--------RNSFVHKEELKSTIVKDNVVLCSGGSH 115

Query: 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVE 215
            I + +  + D GD  +   P F  YE      G  +       ++D+  +++ I    +
Sbjct: 116 GILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKD 175

Query: 216 REKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE--FSGLESRMEWV 269
            +K K + +T+P+NP GS  + + +  I+ +     + +  DE Y    F G +    + 
Sbjct: 176 -DKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFT 234

Query: 270 -----KKHDNLIVLRTFSKRAGLAGLRVGYGAFPL------SIIEYLWRAKQP-YNVSVA 317
                +     ++L   +K   + G R+G+  +        S +E L R           
Sbjct: 235 SVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTV 294

Query: 318 AEVAACAALQN---PIYLEVKEALIKERERLFKLLKDVPFLNP---------YPSYSNFI 365
            + A   AL N       ++   + +    L+  + +   L P                 
Sbjct: 295 VQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEK 354

Query: 366 LCEVTSGMD-AKKLKDDLAKMGVMIRHYNNKELKGYVRVS 404
             ++ + ++  +KL   L +  V +         G+ R++
Sbjct: 355 YRDIKTDVEFFEKL---LEEENVQVLPGTIFHAPGFTRLT 391

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae} Length = 447

 Score = 99.3 bits (248), Expect = 6e-23
 Identities = 52/314 (16%), Positives = 114/314 (36%), Gaps = 62/314 (19%)

Query: 107 YGPPPEVREALGQ---LKFPYIY-PDPESRRLRAALA----KDSGLESD--HILVGCGAD 156
           Y PP    +   +   +     Y P      L  +L          E    ++ V  GA+
Sbjct: 69  YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGAN 128

Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP------------RKSDFS 204
           E I   +  +L+ GD+++   P F  Y  +  + G  VV VP            R  +++
Sbjct: 129 EGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWT 188

Query: 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTEFS 260
           ++ E    A+   K K + + +P+NP G +   E+L  +    ++  ++++ DE Y    
Sbjct: 189 IDFEQFEKAI-TSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVY---- 243

Query: 261 GLESRMEWV----KKHDNLIVL-----RT-----FSKRAGLAGLRVGYG-AFPLSIIEYL 305
                 E +           +       T       K     G R+G+  +    ++ Y 
Sbjct: 244 ------EHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAELLSYA 297

Query: 306 WRAKQ--PYNVSVAAEVAACAALQNPI----YLEVKEALIKERERLFKLLKDVPF--LNP 357
            +A     +      + A   ++ + +    + ++++  I + +    +  ++      P
Sbjct: 298 AKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYTAP 357

Query: 358 YPSYSNFILCEVTS 371
             +Y  F+L + + 
Sbjct: 358 EGTY--FVLVDFSK 369

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium} Length = 417

 Score = 95.4 bits (238), Expect = 9e-22
 Identities = 46/243 (18%), Positives = 81/243 (33%), Gaps = 40/243 (16%)

Query: 134 LRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY-EFD 186
           L  ALA    +  G +    +I +  G+      +                 F +  E+ 
Sbjct: 80  LLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYI 139

Query: 187 AAVN-----------GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235
              +              +  +P +  F  +V+     +  E+   I ++ P NP G++I
Sbjct: 140 GYADSGLEDDLFVSARPNIELLP-EGQFKYHVDFEHLHI-GEETGMICVSRPTNPTGNVI 197

Query: 236 NDEDLLKILEM----PILVVLDEAY------TEFSGLESRMEWVKKHDNLIVLRTFSKRA 285
            DE+L+K+  +     I +V+D AY        FS             N+I+  + SK  
Sbjct: 198 TDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWN-----PNIILCMSLSK-L 251

Query: 286 GLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEVKEALIKE-- 341
           GL G R G        I  +                   C  ++    L + E +IK   
Sbjct: 252 GLPGSRCGIIIANDKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFY 311

Query: 342 RER 344
            +R
Sbjct: 312 YQR 314

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1 Length = 389

 Score = 94.5 bits (236), Expect = 2e-21
 Identities = 57/296 (19%), Positives = 109/296 (36%), Gaps = 58/296 (19%)

Query: 94  PEDIVK-----IDANENPYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE 145
           PE +V+     +   E  Y  P    E+RE + + +                  +    +
Sbjct: 56  PEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAK-RI----------------GERYKKD 98

Query: 146 --SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKS 201
              D ++V  GA + +      +LDPGD+++   P +  Y     + G  V  V      
Sbjct: 99  ISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSK 158

Query: 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYT 257
           +F  ++E +   +   K K + + SPNNP G +   E L  +     +    ++ DE Y 
Sbjct: 159 NFQPSLEEVEGLL-VGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYD 217

Query: 258 EFSGLESRMEWVKKH----------DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR 307
                     +  +           D ++ +  FSK   + G RVGY      +   +  
Sbjct: 218 SLV-------YTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAV-- 268

Query: 308 AK-QPY---NVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYP 359
           +K Q +    ++  A+ AA  AL+      + +   + +  + + LK +      P
Sbjct: 269 SKIQSHTTSCINTVAQYAALKALEVDNS-YMVQTFKERKNFVVERLKKMGVKFVEP 323

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A* Length = 400

 Score = 92.3 bits (230), Expect = 1e-20
 Identities = 66/313 (21%), Positives = 114/313 (36%), Gaps = 52/313 (16%)

Query: 109 PPPEVREAL-------GQLKFPYIYPDPES--RRLRAALA---KDSGLESDHILVGCGAD 156
               V EA                Y  P+     LR  L+       +++  I +  GA 
Sbjct: 47  LNASVAEAFASSIARLSSPTTCRGYG-PDFGLPALRQKLSEDFYRGFVDAKEIFISDGAK 105

Query: 157 ELIDLI-MRCVLDPGDKIVDCPPTFTMYEFDAAVNGA-AVVKVP--RKSDFSLNVELIAD 212
              DL  +     P   +    P++  Y   A + GA  ++ +P  +++ F        +
Sbjct: 106 V--DLFRLLSFFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAF------FPE 157

Query: 213 AVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEF--------S 260
             E      + L SPNNP G+++N + L  I+       IL++ D AY+ F        S
Sbjct: 158 FPEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKS 217

Query: 261 GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY--------GAFPLSIIEYLWRAKQP- 311
             E  +   +     I + +FSK  G AG+R+G+         A    +I+   R     
Sbjct: 218 IFE--IPDAR--FCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLSTT 273

Query: 312 -YNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT 370
               S+ A+ A  A L     LE      +  + L K L    F      ++ ++  + T
Sbjct: 274 FNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLATGFEVFGGEHAPYLWVKPT 333

Query: 371 -SGMDAKKLKDDL 382
            + +  + L D  
Sbjct: 334 QANISDRDLFDFF 346

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A* Length = 397

 Score = 91.1 bits (227), Expect = 3e-20
 Identities = 62/295 (21%), Positives = 127/295 (43%), Gaps = 44/295 (14%)

Query: 126 YPDPE-SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE 184
           Y   E    LRA +A+  G+  + +L+  G+ + +DL+ +  LD G  ++   P++    
Sbjct: 70  YSPTEGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYM--- 126

Query: 185 FDAAVN-----GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN--NPDGSIIND 237
              A+      G   + VP   +   +++ + + ++RE+P+ ++   P+  NP G +   
Sbjct: 127 --GAIQAFRLQGPRFLTVPAGEE-GPDLDALEEVLKRERPRFLY-LIPSFQNPTGGLTPL 182

Query: 238 EDLLKILEM----PILVVLDEAYTE--FSGLESRMEWVKKHD------NLIVLRTFSKRA 285
               ++L+M     ++VV D+AY E  F    +R+  + +         +I L +FSK  
Sbjct: 183 PARKRLLQMVMERGLVVVEDDAYRELYFGE--ARLPSLFELAREAGYPGVIYLGSFSKV- 239

Query: 286 GLA-GLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPI--YLE-VKEALI 339
            L+ GLRV +       ++ L +AKQ    +  +  ++     L+      LE V+    
Sbjct: 240 -LSPGLRVAFAVAHPEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYR 298

Query: 340 KERERLFKLLKDVPFLNPYPSYSN-----FILCEVTSGMDAKKLKDDLAKMGVMI 389
           ++ + +   L     +     Y+      F+  E+  G+ A+ L     +  V  
Sbjct: 299 EKAQAMLHALDR--EVPKEVRYTRPKGGMFVWMELPKGLSAEGLFRRALEENVAF 351

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii} Length = 449

 Score = 91.2 bits (227), Expect = 3e-20
 Identities = 50/282 (17%), Positives = 92/282 (32%), Gaps = 51/282 (18%)

Query: 109 PPPEVREAL-------GQLKFPYIYPDPES--RRLRAALA----KDSGLESDHILVGCGA 155
            P  + +A+          +    Y   E     LR A+A      +G  +D I +  G+
Sbjct: 83  LPKYIADAMAKAAAGLATREGYSGYG-AEQGQGALREAVASTFYGHAGRAADEIFISDGS 141

Query: 156 DELIDLI-MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIA--- 211
               D+  ++ +      +    P++ +Y   + + G          D    +       
Sbjct: 142 KC--DIARIQMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNH 199

Query: 212 ---DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEF----- 259
              D  + ++   IF  SPNNP G+      L +++        ++V D AY  +     
Sbjct: 200 FFPDLSKAKRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPD 259

Query: 260 ---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY--------GAFPLSIIEYLWRA 308
              +  E  +      +  I   +FSK AG  G+R+G+         A    +     R 
Sbjct: 260 CPKTIYE--IPGAD--EVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRV 315

Query: 309 KQP--YNVSVAAEVAACAALQNPIYLEVKE--ALIKERERLF 346
                   S   +    A LQ     E+       KE  ++ 
Sbjct: 316 MTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQIL 357

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm} Length = 533

 Score = 91.4 bits (227), Expect = 4e-20
 Identities = 51/279 (18%), Positives = 89/279 (31%), Gaps = 30/279 (10%)

Query: 89  QLGRKPEDIVKIDANENPYGPPPE-VREA-LGQLKFPYIYPDPESRRLRAALAK------ 140
              +   D V     E       + V E   G +   Y  PD         +        
Sbjct: 97  DEDKFLIDAVNYCHTE-LGLNRDKVVAEWVNGAVANNYPVPDRCLVNTEKIINYFLQELS 155

Query: 141 --DSGLESDH-ILVGCGADELI-----DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGA 192
             D+ L     +    G    I      L    +L  GDKI    P FT Y     +   
Sbjct: 156 YKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDY 215

Query: 193 AVVKVP----RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-- 246
            +V+V      K+D+ +    I    +    K + + +P NP     +   L  I +   
Sbjct: 216 ELVEVDLHSYEKNDWEIEPNEIEKLKD-PSIKALIVVNPTNPTSKEFDTNALNAIKQAVE 274

Query: 247 ---PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302
               ++++ DE Y  F    +S    V    N +++ ++SK  G  G R+G  A     +
Sbjct: 275 KNPKLMIISDEVYGAFVPNFKSIYSVVP--YNTMLVYSYSKLFGCTGWRLGVIALNEKNV 332

Query: 303 EYLWRAKQPYNVSVAAEVAACAALQNPIYLEVKEALIKE 341
                A               + + +P  ++  + L  +
Sbjct: 333 FDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCAD 371

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A* Length = 432

 Score = 90.0 bits (224), Expect = 8e-20
 Identities = 51/282 (18%), Positives = 91/282 (32%), Gaps = 50/282 (17%)

Query: 109 PPPEVREAL-------GQLKFPYIYPDPES--RRLRAALA----KDSGLESDHILVGCGA 155
            P  +  A+         ++    Y   E   + LRAA+A       G+  D + V  GA
Sbjct: 70  IPEVITSAMAKKAHELSTIEGYSGYG-AEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGA 128

Query: 156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVEL------ 209
              I  + + +      I    P++  Y   + + G           +     +      
Sbjct: 129 KCDISRL-QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPEN 187

Query: 210 --IADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEF---- 259
               D     +   IF  SPNNP G+    E L +++E       ++V D AY  +    
Sbjct: 188 GFFPDLSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDD 247

Query: 260 ---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----- 311
              S  E  +   +  +  +   +FS  AG  G+R+G+   P  ++              
Sbjct: 248 NPRSIFE--IPGAE--EVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRI 303

Query: 312 -----YNVSVAAEVAACAALQNPIYLEVKE--ALIKERERLF 346
                   S  ++  A A L       + +     KE   + 
Sbjct: 304 ICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNII 345

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4} Length = 444

 Score = 89.4 bits (222), Expect = 1e-19
 Identities = 51/332 (15%), Positives = 107/332 (32%), Gaps = 62/332 (18%)

Query: 134 LRAALA----KDSGLE--SDHILVGCGA----DELIDLIMRCVLDPGDKIVDCP------ 177
              AL     +       S++I +  G+      L +L     ++   +  +        
Sbjct: 88  FIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSI 147

Query: 178 -----PTFTMYEFDAAVNGAAVVKVPR-----------KSDFSLNVELIADAVE--REKP 219
                P +  Y             +P               + ++ E + +       + 
Sbjct: 148 LLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRI 207

Query: 220 KCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTE-FSGLESRMEWVKKHDN 274
             I  + P NP G+++ DE++  + E+     I +++D AY   F  +      +   +N
Sbjct: 208 GAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNN 267

Query: 275 LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYL 332
            I+  + SK  GL G+R G       +IE +           +      A   + N    
Sbjct: 268 TILCFSLSK-IGLPGMRTGIIVADAKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRIK 326

Query: 333 EVKEALIKE--RER-------LFKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDL 382
           ++ +  IK   +++       L + L D P +   P  + F+        +    L + L
Sbjct: 327 QLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLPISTLDLYERL 386

Query: 383 AKMGVMI----------RHYNNKELKGYVRVS 404
              G +I             + +     +R+S
Sbjct: 387 KAKGTLIVPSEYFFPGVDVSDYQHAHECIRMS 418

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare} Length = 500

 Score = 89.1 bits (221), Expect = 2e-19
 Identities = 44/266 (16%), Positives = 99/266 (37%), Gaps = 46/266 (17%)

Query: 134 LRAALA----KDSGLESD--HILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFD 186
           LR A+A       G  ++   I +  GA   + L+M+ ++ +  D I+   P + +Y   
Sbjct: 139 LRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSAS 198

Query: 187 AAVNGAAVVKVPRK--SDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDED 239
            A++G A+V       + + L    +   +E         + + + +P NP G ++ +E+
Sbjct: 199 IALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEEN 258

Query: 240 LLKILEM----PILVVLDEAYTE-----------FSGLESRMEWVKKHDNLIVLRTFSK- 283
              I++      ++++ DE Y E           F  +   + + ++   L+  ++ SK 
Sbjct: 259 QYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKG 318

Query: 284 RAGLAGLRVGYGAFPLSIIEYLWRAKQPYNV----SVAAEVAACAALQNP---------- 329
             G  G R GY            +  +  +V    ++  ++ A   +  P          
Sbjct: 319 YYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASY 378

Query: 330 --IYLEVKEALIKERERLFKLLKDVP 353
                 +  +L +  + L      + 
Sbjct: 379 KAEKDGILASLARRAKALEHAFNKLE 404

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A* Length = 546

 Score = 87.6 bits (217), Expect = 8e-19
 Identities = 46/236 (19%), Positives = 89/236 (37%), Gaps = 27/236 (11%)

Query: 92  RKPEDIVKIDANENPYGPPPEVREA-LGQLKFPYIYPD--PESRR--LRAALAKDSGL-- 144
           R     +    ++    P   + E   G L   Y  P          +R  + ++ G   
Sbjct: 101 RFLGKSLSYVRDQLGLDPAAFLHEMVDGILGCNYPVPPRMLNISEKIVRQYIIREMGADA 160

Query: 145 ---ESDHILVGCGADELI-----DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK 196
              ES ++    G    +      L +  +L  GDK+    P FT Y     +   A+ +
Sbjct: 161 IPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEE 220

Query: 197 VPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM------P 247
           V   +D SLN +     +++      K  F  +P+NP    ++   L ++  +       
Sbjct: 221 VAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPD 280

Query: 248 ILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302
           ++++ D+ Y  F+   +S        +N +++ +FSK  G  G R+G  A     +
Sbjct: 281 LMILTDDVYGTFADDFQSLFAICP--ENTLLVYSFSKYFGATGWRLGVVAAHQQNV 334

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A* Length = 385

 Score = 83.7 bits (208), Expect = 7e-18
 Identities = 64/313 (20%), Positives = 120/313 (38%), Gaps = 68/313 (21%)

Query: 94  PEDIVK-----IDANENPYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE 145
           PE + +     +   +  Y PP   PE+REAL + KF                 +++GL 
Sbjct: 46  PEHVKEAARRALAQGKTKYAPPAGIPELREALAE-KF----------------RRENGLS 88

Query: 146 --SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKS 201
              +  +V  G  + +  + + +LDPGD+++   P +  Y       G  VV+V    + 
Sbjct: 89  VTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEE 148

Query: 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYT 257
            F  + E +  A+   + K + + SPNNP G++   E L  +    +E    +V DE Y 
Sbjct: 149 GFVPDPERVRRAI-TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIY- 206

Query: 258 EFSGLESRMEWVKKH--------DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309
                   + +  +H        ++ + +   +K   + G R+GY   P  +I+ +  A 
Sbjct: 207 ------EHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAM--AS 258

Query: 310 -Q------PYNVSVAAEVAACAALQNPIYL--EVKEALIKERERLFKLLKDVPF--LNP- 357
                   P  ++  A + A    +         +EA  + R+ L + L  +    + P 
Sbjct: 259 VSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS 318

Query: 358 -----YPSYSNFI 365
                    S   
Sbjct: 319 GAFYVLMDTSPIA 331

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens} Length = 498

 Score = 84.1 bits (208), Expect = 1e-17
 Identities = 51/270 (18%), Positives = 92/270 (34%), Gaps = 50/270 (18%)

Query: 134 LRAALA-----KDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVD---CP-PTFTM 182
           +R  +A     +D G+ +D  +I +  GA + I  I++ ++  G K       P P + +
Sbjct: 134 IREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPL 193

Query: 183 YEFDAAVNGAAVVKVPRK--SDFSLNVE----LIADAVEREKPKCIFLTSPNNPDGSIIN 236
           Y    +   A  V       + ++LNV      + +A +   PK + + +P NP G + +
Sbjct: 194 YSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQS 253

Query: 237 DEDLLKILEM----PILVVLDEAYTEF------------SGLESRMEWVKKHDNLIVLRT 280
            + +  ++       + ++ DE Y +               L         +  L    +
Sbjct: 254 RKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHS 313

Query: 281 FSKR-AGLAGLRVGYGA---FPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP------- 329
            SK   G  G R GY         I   L +          +  AA   + NP       
Sbjct: 314 TSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEES 373

Query: 330 ------IYLEVKEALIKERERLFKLLKDVP 353
                     V   L K+ +    L   VP
Sbjct: 374 FEQFSREKESVLGNLAKKAKLTEDLFNQVP 403

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus} Length = 430

 Score = 83.6 bits (207), Expect = 1e-17
 Identities = 52/332 (15%), Positives = 100/332 (30%), Gaps = 51/332 (15%)

Query: 103 NENPYGPPPEVREALGQLK----FPYIYPD--PESRRLRAALAK--DSGLESDH---ILV 151
           N++       +      L     FPY  P    E R L        +  L  D+    +V
Sbjct: 59  NKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIV 118

Query: 152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVEL 209
                  + L+    ++  D I+     +  Y+        A ++       D     + 
Sbjct: 119 TNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDS 178

Query: 210 IADAVEREKPKC---IFLTSPNNPDGSIINDEDLLKILEM---------PILVVLDEAYT 257
           + +A++    K    + L  PNNP G     +++  I+E           ++ V+D+AY 
Sbjct: 179 LVEALQ-SYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYY 237

Query: 258 EF--------SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309
                     S   +           I L   +K     G RVG+  F  S        +
Sbjct: 238 GLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLE 297

Query: 310 QP------YNVS---VAAEVAACAALQNPIYL------EVKE--ALIKERERLFKLLKDV 352
                    N+S   +  + A    L+N           ++      +  + +    +  
Sbjct: 298 AKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYH 357

Query: 353 PFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK 384
                Y   S + +      +D + L+  L  
Sbjct: 358 SHWQAYDFNSGYFMAIKVHDVDPEALRKHLID 389

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1 Length = 425

 Score = 83.5 bits (207), Expect = 1e-17
 Identities = 64/328 (19%), Positives = 120/328 (36%), Gaps = 62/328 (18%)

Query: 126 YPDPE-SRRLRAALAK-------DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCP 177
           Y   E    L+  + K        +GL+ D+++   G+ + +DLI +  LD     V   
Sbjct: 81  YSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDD 140

Query: 178 PTFTMYEFDAAVN-----GAAVVKVPRKSDFSLNVELIADAVER-------EKPKCIFLT 225
           P +       A+N      A  V VP + D  +++ ++   +         ++ K I+  
Sbjct: 141 PAYL-----GAINAFRQYLANFVVVPLEDD-GMDLNVLERKLSEFDKNGKIKQVKFIY-V 193

Query: 226 SPN--NPDGSIINDEDLLKILEM----PILVVLDEAYTE--FSGLESRMEWVK---KHDN 274
             N  NP G   + E    ++E+     + +V D+ Y    + G    ++ +      + 
Sbjct: 194 VSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEG--ETVDPIFKIGGPER 251

Query: 275 LIVLRTFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNP-- 329
           +++L TFSK   LA GLR+G  A     I  + +AKQ             A   L+    
Sbjct: 252 VVLLNTFSKV--LAPGLRIGMVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERYDL 309

Query: 330 ---------IYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD 380
                    +Y   +  ++   E  F  +  V ++        FI   +  G D  ++ +
Sbjct: 310 LEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGL--FIWLTLPEGFDTWEMFE 367

Query: 381 DLAKMGVMI----RHYNNKELKGYVRVS 404
              +  V            E    +R+S
Sbjct: 368 YAKRKKVFYVPGRVFKVYDEPSPSMRLS 395

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1 Length = 388

 Score = 82.6 bits (205), Expect = 2e-17
 Identities = 66/291 (22%), Positives = 122/291 (41%), Gaps = 55/291 (18%)

Query: 94  PEDIVK-----IDANENPYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE 145
           P+ IV+     ++  +  YGP    P +REA+ Q K                  +D+GL 
Sbjct: 45  PKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQ-KL----------------QRDNGLC 87

Query: 146 --SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKS 201
             +D+ILV  G  + I  +M  +++PGD+++   P +  Y     +     V +P   ++
Sbjct: 88  YGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVET 147

Query: 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAY- 256
            F ++ E I  A+   K K +   +P+NP G +   +++  I ++     + V+ DE Y 
Sbjct: 148 QFKVSPEQIRQAI-TPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYE 206

Query: 257 ------TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310
                  +   + +        +  +V   F+K   + G RVG+ A P+ ++    +A  
Sbjct: 207 KILYDDAQHLSIGAASPEAY--ERSVVCSGFAKTYAMTGWRVGFLAGPVPLV----KAAT 260

Query: 311 PY------NVSVAAEVAACAALQNP--IYLEVKEALIKERERLFKLLKDVP 353
                   NV   A+  A AA +N      E+  A  + R  +   L  +P
Sbjct: 261 KIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMP 311

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A* Length = 448

 Score = 82.3 bits (204), Expect = 3e-17
 Identities = 71/303 (23%), Positives = 131/303 (43%), Gaps = 52/303 (17%)

Query: 126 YPDPE-SRRLRAALA---KDSGL--ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           Y   +    LR  L           + + I++  G+ + +DLI R  L+PGD +V   PT
Sbjct: 114 YGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPT 173

Query: 180 FTMYEFDAAVN-----GAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPN- 228
           +      AA+          +++P   +  + VE++ + ++      +K K ++ T P  
Sbjct: 174 YL-----AALQAFNFYEPQYIQIPLDDE-GMKVEILEEKLKELKSQGKKVKVVY-TVPTF 226

Query: 229 -NPDGSIINDEDLLKILEM----PILVVLDEAYTE--FSGLESRMEWVK---KHDNLIVL 278
            NP G  +N++    +LE+      +VV D+ Y E  +SG  +  + +K       +I L
Sbjct: 227 QNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSG--NPEKKIKALDNEGRVIYL 284

Query: 279 RTFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-- 333
            TFSK   LA G R+G+      II  +  AKQ      +V  +V A   +      +  
Sbjct: 285 GTFSKI--LAPGFRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHI 342

Query: 334 --VKEALIKERERLFKLLKDVPFLNPYPSYSN-----FILCEVTSGMDAKKLKDDLAKMG 386
             +++     R+ + + L++  F+     ++      FI   +  G+D+KK+ +   K G
Sbjct: 343 PEIRKFYKPRRDAMLEALEE--FMPEGVKWTKPEGGMFIWVTLPDGIDSKKMLERAIKKG 400

Query: 387 VMI 389
           V  
Sbjct: 401 VAY 403

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis} Length = 407

 Score = 81.5 bits (202), Expect = 5e-17
 Identities = 71/324 (21%), Positives = 132/324 (40%), Gaps = 58/324 (17%)

Query: 126 YPDPE-SRRLRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
           Y        LR  LA    K   LE   ++I++  G    +DL+ R ++DPGD ++   P
Sbjct: 71  YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENP 130

Query: 179 TFTMYEFDAAVN-----GAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPN 228
           ++        +      GA +  VP  +D  + V+L+ + ++      +K K I+ T P 
Sbjct: 131 SYI-----NTLLAFEQLGAKIEGVPVDND-GMRVDLLEEKIKELKAKGQKVKLIY-TIPT 183

Query: 229 --NPDGSIINDEDLLKILEM----PILVVLDEAYTE--FSGLESRMEWVKKHD---NLIV 277
             NP G  ++ E    +LE+     +L++ D AY    + G    +  +K  D    +IV
Sbjct: 184 GQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEG--GDIVPLKALDNEGRVIV 241

Query: 278 LRTFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEV 334
             T SK   L  G R+G+      I++ +   KQP  +     ++  A   L+   + + 
Sbjct: 242 AGTLSKV--LGTGFRIGWIIAEGEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKY 299

Query: 335 KEALIKE--RER-------LFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL-KDDLAK 384
                    +E+       L   L +  F  P      F++  +  G D      + + +
Sbjct: 300 HLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGM--FVMFFLPEGADGISFANELMER 357

Query: 385 MGVMI----RHYNNKELKGYVRVS 404
            GV++      Y ++  K  +R++
Sbjct: 358 EGVVVVPGKPFYTDESGKNAIRLN 381

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300} Length = 423

 Score = 78.2 bits (193), Expect = 7e-16
 Identities = 32/193 (16%), Positives = 59/193 (30%), Gaps = 33/193 (17%)

Query: 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCP-PTFTMYEFDAAVN-----GAAVV 195
           S LE   +++       +       L    K++    P      +D         G  ++
Sbjct: 96  SSLELQGLVLTFALLHGVRGSTGPWLSQTPKMI-VTVPG-----YDRHFLLLQTLGFELL 149

Query: 196 KVPRKSDFSLNVELIADAV-EREKPKCIFLTSPN--NPDGSIINDEDLLKILEMP----- 247
            V  +SD   +V+ +          K I    P   NP G  I+ E   ++  +      
Sbjct: 150 TVDMQSD-GPDVDAVERLAGTDPSVKGIL-FVPTYSNPGGETISLEKARRLAGLQAAAPD 207

Query: 248 ILVVLDEAYTE--FSG-----LESRMEWVKKHDN---LIVLRTFSKRAGLAGLRVGYGAF 297
             +  D+AY              + +   +         V  + SK    AG  +G+ A 
Sbjct: 208 FTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKIT-FAGAGLGFVAS 266

Query: 298 PLSIIEYLWRAKQ 310
               I +L +   
Sbjct: 267 SEDNIRWLSKYLG 279

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae} Length = 422

 Score = 77.0 bits (190), Expect = 1e-15
 Identities = 42/213 (19%), Positives = 78/213 (36%), Gaps = 45/213 (21%)

Query: 134 LRAALAKDSGLESDHILVGCGADELI--DLIMRCVL------------DPGDKIVDCP-P 178
           +R   A+  GL +D ++   G+   I  DLI                 +   K + CP P
Sbjct: 81  IRELWAEALGLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWL-CPVP 139

Query: 179 TFTMYEFDAAVN-----GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN--NPD 231
            +     D         G  ++ VP   +   ++ ++ + V+  + K ++ T P   NP 
Sbjct: 140 GY-----DRHFTITEHFGFEMINVPMTDE-GPDMGVVRELVKDPQVKGMW-TVPVFGNPT 192

Query: 232 GSIINDEDLLKILEMP-----ILVVLDEAYTE--FSG----LESRMEWVKKHDN---LIV 277
           G   +++   ++ EM        +V D AY     S     + + +E+ +   N      
Sbjct: 193 GVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWF 252

Query: 278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310
           + + SK    AG  V + A     IE+      
Sbjct: 253 MSSTSK-ITHAGSGVSFFASSKENIEWYASHAN 284

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum} Length = 427

 Score = 73.2 bits (180), Expect = 3e-14
 Identities = 35/213 (16%), Positives = 68/213 (31%), Gaps = 45/213 (21%)

Query: 134 LRAALAKDSGLESDHILVGCGADELI--------------DLIMRCVLDPGDKIVDCP-P 178
           +R   A   G+  + +L G  +   I              D +     +   K + CP P
Sbjct: 83  IRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWI-CPVP 141

Query: 179 TFTMYEFDAAVN-----GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN--NPD 231
            +     D   +     G  ++ VP   D   +++ + + V+  + K ++   P   NP 
Sbjct: 142 GY-----DRHFSITERFGFEMISVPMNED-GPDMDAVEELVKNPQVKGMW-VVPVFSNPT 194

Query: 232 GSIINDEDLLKILEMP-----ILVVLDEAYTE--FSG-------LESRMEWVKKHDNLIV 277
           G  + ++   ++  M        VV D AY     +        +    E     +    
Sbjct: 195 GFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWA 254

Query: 278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310
             + SK   LAG  V +        ++      
Sbjct: 255 FTSTSK-ITLAGAGVSFFLTSAENRKWYTGHAG 286

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A* Length = 425

 Score = 72.7 bits (179), Expect = 4e-14
 Identities = 70/401 (17%), Positives = 139/401 (34%), Gaps = 77/401 (19%)

Query: 65  SFIRSHLRKLKPYQP-------------ILPFEVLSIQLGRKPEDIVKIDANENP--YGP 109
           S IR+    L                  + PF+   I +          +  +    Y P
Sbjct: 17  SPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMKRALQYSP 76

Query: 110 P---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166
               PE+   L QL+                +          + V  G+ + +  +   +
Sbjct: 77  SAGIPELLSWLKQLQ--------IKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMI 128

Query: 167 LDPGDKIVDCPPTF--TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-------- 216
           ++PGD ++   P +  T+        G  ++ V       +  + + D + R        
Sbjct: 129 INPGDNVLLDEPAYSGTLQSLHPL--GCNIINVASDES-GIVPDSLRDILSRWKPEDAKN 185

Query: 217 ---EKPKCIFLTSPN--NPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME 267
                PK ++ T PN  NP G+ +  E   +I E+      L++ D+ Y      + R+ 
Sbjct: 186 PQKNTPKFLY-TVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVP 244

Query: 268 WVKKHD---NLIVLRTFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVA 321
                D    +I   +FSK   ++ GLR+G+   P  +IE +    Q    + S   ++ 
Sbjct: 245 TFLSMDVDGRVIRADSFSKI--ISSGLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLM 302

Query: 322 ACAALQN---PIYLE----VKEALIKERERLFKLLKDVPFLNPYPSYSN-----FILCEV 369
               L       ++     V +    +++ +        +L     +       F+  +V
Sbjct: 303 ISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADK--WLTGLAEWHVPAAGMFLWIKV 360

Query: 370 TSGMDAKKLKDDLA-KMGVMIR-----HYNNKELKGYVRVS 404
               D K+L ++ A KMGV++      + ++     Y+R S
Sbjct: 361 KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRAS 401

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 54.1 bits (129), Expect = 6e-08
 Identities = 67/431 (15%), Positives = 127/431 (29%), Gaps = 151/431 (35%)

Query: 81  LPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAK 140
           + FE    Q   K  DI+ +   E+ +     V           +  D      ++ L+K
Sbjct: 7   MDFETGEHQYQYK--DILSV--FEDAF-----VDN----FDCKDV-QD----MPKSILSK 48

Query: 141 DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF------TMYEF--------- 185
           +   E DHI++   A      +   +L   +++V     F        Y+F         
Sbjct: 49  E---EIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQ---KFVEEVLRINYKFLMSPIKTEQ 102

Query: 186 --------------DAAVNGAAVVK---VPRKSDF--------SLNVE------------ 208
                         D   N   V     V R   +         L               
Sbjct: 103 RQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSG 162

Query: 209 ---LIADAVEREKPKC-----IF-LTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTE- 258
              +  D     K +C     IF L        +  + E +L++L+  +L  +D  +T  
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIFWLNL-----KNCNSPETVLEMLQK-LLYQIDPNWTSR 216

Query: 259 ---FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK--QPYN 313
               S ++ R+  ++     ++     +               L ++  +  AK    +N
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENC-------------LLVLLNVQNAKAWNAFN 263

Query: 314 V-----------SVAAEVAACAALQNPIYLEVKEALIK-ERERLF-KLL----KDVP--- 353
           +            V   ++A A   +         L   E + L  K L    +D+P   
Sbjct: 264 LSCKILLTTRFKQVTDFLSA-ATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREV 322

Query: 354 -FLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTD 412
              NP        L      + A+ ++D LA      +H N  +L   +  S+      +
Sbjct: 323 LTTNP------RRL-----SIIAESIRDGLATWD-NWKHVNCDKLTTIIESSL------N 364

Query: 413 ALMECLM-HLY 422
            L       ++
Sbjct: 365 VLEPAEYRKMF 375

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.0 bits (121), Expect = 6e-07
 Identities = 67/474 (14%), Positives = 149/474 (31%), Gaps = 171/474 (36%)

Query: 67  IRSHLRKLKPYQPI--------------------------LPFEVLSIQLGR--KPEDIV 98
           +R  L +L+P + +                          + F++  + L     PE ++
Sbjct: 140 LRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL 199

Query: 99  KI----------------DANENPYGPPPEVREALGQLKFPYIYP----------DPE-- 130
           ++                D + N       ++  L +L     Y           + +  
Sbjct: 200 EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAW 259

Query: 131 ------------SR------RLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGD 171
                       +R       L AA      +  DH  +    DE+  L+++ +   P D
Sbjct: 260 NAFNLSCKILLTTRFKQVTDFLSAATTTH--ISLDHHSMTLTPDEVKSLLLKYLDCRPQD 317

Query: 172 ---KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV------ELIADAVEREKP--- 219
              +++   P         ++   ++       D   +V       +I  ++   +P   
Sbjct: 318 LPREVLTTNP------RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEY 371

Query: 220 -KC-----IFLTSPNNPDGSIINDEDLLKIL--EMP---ILVVLDEAYTEFSGLESRMEW 268
            K      +F      P  + I    LL ++  ++    ++VV+++ +  +S +E   + 
Sbjct: 372 RKMFDRLSVF------PPSAHI-PTILLSLIWFDVIKSDVMVVVNKLHK-YSLVE---KQ 420

Query: 269 VKK-----HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAAC 323
            K+         I L    K      L         SI+++       YN+    +    
Sbjct: 421 PKESTISIPS--IYLELKVKLENEYALHR-------SIVDH-------YNIPKTFDSDDL 464

Query: 324 AALQNPIYL------EVKEALIKERERLFKLLKDVPFLNPYPSYSNFI---LCEVTSGMD 374
                  Y        +K     ER  LF+++    FL+       F+   +   ++  +
Sbjct: 465 IPPYLDQYFYSHIGHHLKNIEHPERMTLFRMV----FLD-----FRFLEQKIRHDSTAWN 515

Query: 375 AK-KLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEH-TDALMECLM----HLY 422
           A   + + L +    ++ Y     K Y+  +  K E   +A+++ L     +L 
Sbjct: 516 ASGSILNTLQQ----LKFY-----KPYICDNDPKYERLVNAILDFLPKIEENLI 560

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.6 bits (107), Expect = 3e-05
 Identities = 24/120 (20%), Positives = 45/120 (37%), Gaps = 22/120 (18%)

Query: 65  SFIRSHLRKLKPYQPILPFEVLSIQLG--RKPEDIVKIDANENPYGPPPEVREALGQLKF 122
           S I  HL+ ++  + +  F ++ +      +     KI  +   +     +   L QLKF
Sbjct: 475 SHIGHHLKNIEHPERMTLFRMVFLDFRFLEQ-----KIRHDSTAWNASGSILNTLQQLKF 529

Query: 123 --PYIYP-DPESRRLRAALAKDSGLESDHILVGCGADELI----DLIMRCVLDPGDKIVD 175
             PYI   DP+  RL  A+           L     + +     DL+   ++   + I +
Sbjct: 530 YKPYICDNDPKYERLVNAIL--------DFLPKIEENLICSKYTDLLRIALMAEDEAIFE 581

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3 Length = 390

 Score = 49.4 bits (119), Expect = 1e-06
 Identities = 39/217 (17%), Positives = 83/217 (38%), Gaps = 37/217 (17%)

Query: 109 PPPEVREALGQ-LKFP-YIYPDPESRRLRAALAK------DSGLESDHILVGCGADELID 160
             P + EAL Q L    + Y   ++    AA+A        + ++S  ++ G     ++ 
Sbjct: 42  TAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVS 101

Query: 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSD---FSLNVELIADAVE 215
            ++R   + G+ +V   P +    F  A+  N   V+ V  +     +  ++  +   + 
Sbjct: 102 ELIRQWSETGEGVVIHTPAY--DAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLA 159

Query: 216 REKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE----------AYTEFSG 261
           + + K + L SP NP G +   ++L  + ++     + V+ DE           +  +S 
Sbjct: 160 KPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSN 219

Query: 262 LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
           +           +  +L + SK   +  L   YG   
Sbjct: 220 V--------ARGDWALLTSGSKSFNIPALTGAYGIIE 248

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans} Length = 421

 Score = 49.5 bits (119), Expect = 1e-06
 Identities = 69/342 (20%), Positives = 135/342 (39%), Gaps = 54/342 (15%)

Query: 109 PPPEVREALGQ-LKFP---YIYPDPESRRLRAALAK------DSGLESDHILVGCGADEL 158
           P PE++EA+    +     Y Y + +   L  A+        D  +  + IL   G    
Sbjct: 75  PVPEIKEAIINYGREHIFGYNYFNDD---LYQAVIDWERKEHDYAVVKEDILFIDGVVPA 131

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSD---FSLNVELIADA 213
           I + ++   + GD ++   P +  Y F   +  N   +V+   +     F ++ E +   
Sbjct: 132 ISIALQAFSEKGDAVLINSPVY--YPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKD 189

Query: 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE----------AYTEF 259
           +     K   L SP+NP G + +++DL+KI E+     +++V DE           +   
Sbjct: 190 IIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSL 249

Query: 260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP----LSIIEYLWRAKQPYNVS 315
           + L++  +     D  I+L + +K   +AG +  +            +Y   A   + V 
Sbjct: 250 NTLDASYK-----DFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLANNQHEVP 304

Query: 316 VAAEVAACAALQN--PIYLEVKEALIKERERLFKLLKDVPFLNPYP---SYSNFILCEVT 370
               +A  AA Q   P   E+K  +    + + K L+    +       +Y  ++     
Sbjct: 305 TVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAY 364

Query: 371 SGMDAKKLKDDL---AKMGVMI-RHYNNKELKGYVRVSVGKP 408
             +   +L + L   AK+ +    H+  KE K + R++V  P
Sbjct: 365 -AIAQPQLSEKLQNEAKVVLNDGAHF-GKEGKYFARLNVATP 404

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A* Length = 392

 Score = 47.9 bits (115), Expect = 3e-06
 Identities = 45/250 (18%), Positives = 89/250 (35%), Gaps = 43/250 (17%)

Query: 109 PPPEVREALGQ-LKFP---YIYPDPESRRLRAALAK------DSGLESDHILVGCGADEL 158
             PEV++A+    +     Y Y   E   L  A+            + + I+   G    
Sbjct: 45  VMPEVKQAIHDYAEQLVYGYTYASDE---LLQAVLDWEKSEHQYSFDKEDIVFVEGVVPA 101

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSD---FSLNVELIADA 213
           I + ++     G+ ++   P +    F  +V  N   +V    K +   F ++ E + + 
Sbjct: 102 ISIAIQAFTKEGEAVLINSPVY--PPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLEND 159

Query: 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE----------AYTEF 259
           +     K   L +P+NP G +   E L +I  +     +++V DE           +  F
Sbjct: 160 IVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSF 219

Query: 260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP----LSIIEYLWRAKQPYNVS 315
           + +          D  +VL + +K   +AG +  Y         +  ++       + VS
Sbjct: 220 NTVSPDF-----KDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNHHEVS 274

Query: 316 VAAEVAACAA 325
               +A   A
Sbjct: 275 SLGYIATETA 284

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} Length = 391

 Score = 47.1 bits (113), Expect = 5e-06
 Identities = 41/219 (18%), Positives = 83/219 (37%), Gaps = 39/219 (17%)

Query: 109 PPPEVREALGQ-LKFP---YIYPDPESRRLRAALAK------DSGLESDHILVGCGADEL 158
             PE+  ++ + LK     Y     E      A+A        +  + D  +   G    
Sbjct: 41  IAPEIMASMEEKLKVAAFGYESVPAE---YYKAVADWEEIEHRARPKEDWCVFASGVVPA 97

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSD---FSLNVELIADA 213
           I  ++R    PGD+I+   P +    F + +  NG  V+      +   +S+N   + + 
Sbjct: 98  ISAMVRQFTSPGDQILVQEPVY--NMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEK 155

Query: 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE----------AYTEF 259
           +     + +   +P+NP G   ++E++ +I E+     +L++ DE            T  
Sbjct: 156 LATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPA 215

Query: 260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
             ++   +     + ++ L + SK   LA L       P
Sbjct: 216 FTVDWDAK-----NWVVSLISPSKTFNLAALHAACAIIP 249

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A* Length = 399

 Score = 46.7 bits (112), Expect = 7e-06
 Identities = 42/250 (16%), Positives = 86/250 (34%), Gaps = 43/250 (17%)

Query: 109 PPPEVREALGQ-LKFP---YIYPDPESRRLRAALAK------DSGLESDHILVGCGADEL 158
            PPE+ E L + L      Y  P  E    +  + K         +++D I+   G    
Sbjct: 45  NPPELIEGLKKYLDETVLGYTGPTEE---YKKTVKKWMKDRHQWDIQTDWIINTAGVVPA 101

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSD---FSLNVELIADA 213
           +   +R    PGD ++   P +  Y F  A+      +++         ++++ + +   
Sbjct: 102 VFNAVREFTKPGDGVIIITPVY--YPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKL 159

Query: 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE----------AYTEF 259
            + +  K +   SP+NP G +   ++L KI ++     +++  DE           +T F
Sbjct: 160 SKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVF 219

Query: 260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP----LSIIEYLWRAKQPYNVS 315
             ++ ++      D  I     SK   +AG+ +                   A      +
Sbjct: 220 QSIDEQL-----ADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDATSGMPFT 274

Query: 316 VAAEVAACAA 325
                A    
Sbjct: 275 TLGYKACEIC 284

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae} Length = 377

 Score = 46.7 bits (112), Expect = 7e-06
 Identities = 39/245 (15%), Positives = 75/245 (30%), Gaps = 41/245 (16%)

Query: 109 PPPEVREALGQ-LKFP---YIYPDPESRRLRAALAK------DSGLESDHILVGCGADEL 158
             P V +A+   ++     Y         L  A A+            + I         
Sbjct: 37  TCPAVLQAITDAVQREAFGYQPDGSL---LSQATAEFYADRYGYQARPEWIFPIPDVVRG 93

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSDFSLNVELIADAVER 216
           + + +        K++   P +    F   +       + +       +N+  +     +
Sbjct: 94  LYIAIDHFTPAQSKVIVPTPAY--PPFFHLLSATQREGIFIDAT--GGINLHDVEKGF-Q 148

Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE---------AYTEFSGLE 263
              + I L +P NP G +   E L ++ ++       V++DE          +T  +G+ 
Sbjct: 149 AGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVS 208

Query: 264 SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP---YNVSVAAEV 320
                       I +   SK   +AGL+     F        W+   P      S    +
Sbjct: 209 DTAA-----SVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLI 263

Query: 321 AACAA 325
           AA AA
Sbjct: 264 AAEAA 268

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A* Length = 391

 Score = 42.5 bits (101), Expect = 2e-04
 Identities = 36/226 (15%), Positives = 79/226 (34%), Gaps = 54/226 (23%)

Query: 109 PPPEVREALGQ-LKFP---YIYPDPESRRLRAALAK------DSGLESDHILVGCGADEL 158
             P + ++L   L+     Y            ++        +  ++S+ ++   G    
Sbjct: 46  AAPCIIDSLKNRLEQEIYGYTTRPDS---YNESIVNWLYRRHNWKIKSEWLIYSPGVIPA 102

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKS--------DFSLNVE 208
           I L++  +    DKI+   P +    F++ V  N   ++  P +         D+     
Sbjct: 103 ISLLINELTKANDKIMIQEPVY--SPFNSVVKNNNRELIISPLQKLENGNYIMDY----- 155

Query: 209 LIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE-------- 254
              + +E   +  K   L +P+NP G +   ++L K+ ++     + ++ DE        
Sbjct: 156 ---EDIENKIKDVKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILK 212

Query: 255 --AYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
              +   + +           N I     +K   +AGL+  Y   P
Sbjct: 213 KHKHIPMASISKEF-----EKNTITCMAPTKTFNIAGLQSSYVVLP 253

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	422
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	100.0
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	100.0
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	100.0
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	100.0
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	100.0
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	100.0
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	100.0
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	100.0
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	100.0
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	100.0
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	100.0
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	100.0
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	100.0
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	100.0
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	100.0
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	100.0
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	100.0
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	100.0
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	100.0
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	100.0
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	100.0
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	100.0
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	100.0
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	100.0
3ele_A	398	Amino transferase; RER070207001803, structural gen	100.0
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	100.0
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	100.0
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	100.0
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	100.0
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	100.0
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	100.0
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	100.0
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	100.0
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	100.0
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	100.0
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	100.0
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	100.0
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	100.0
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	100.0
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	100.0
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	100.0
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	100.0
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	100.0
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	100.0
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	100.0
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	100.0
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	100.0
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	100.0
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	100.0
1vp4_A	425	Aminotransferase, putative; structural genomics, j	100.0
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	100.0
3rq1_A	418	Aminotransferase class I and II; structural genomi	100.0
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	100.0
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	100.0
3nra_A	407	Aspartate aminotransferase; structural genomics, j	100.0
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	100.0
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	100.0
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	100.0
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	100.0
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	100.0
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	100.0
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	100.0
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	100.0
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	100.0
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	100.0
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	100.0
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	100.0
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	100.0
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	100.0
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	100.0
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	100.0
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	100.0
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	100.0
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	100.0
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	100.0
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	100.0
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	100.0
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	100.0
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	100.0
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	100.0
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	100.0
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	100.0
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	100.0
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	100.0
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	100.0
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	100.0
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	100.0
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	100.0
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	100.0
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	100.0
1iug_A	352	Putative aspartate aminotransferase; wild type, py	100.0
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	100.0
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	100.0
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	100.0
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	100.0
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	100.0
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	100.0
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	100.0
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	100.0
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	100.0
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	100.0
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	100.0
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	100.0
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	100.0
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	100.0
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	100.0
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	100.0
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	100.0
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	100.0
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	100.0
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	100.0
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	100.0
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	100.0
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	100.0
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	100.0
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	100.0
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	100.0
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	100.0
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	100.0
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	100.0
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	100.0
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	100.0
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	100.0
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	100.0
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	100.0
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	100.0
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	100.0
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	99.98
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	99.98
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	99.98
1svv_A	359	Threonine aldolase; structural genomics, structura	99.97
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	99.97
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	99.97
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	99.97
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	99.97
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	99.97
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	99.97
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.97
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	99.97
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	99.97
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	99.97
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.97
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	99.97
1z7d_A	433	Ornithine aminotransferase; structural genomics co	99.97
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	99.97
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	99.97
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	99.97
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	99.97
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	99.97
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	99.97
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	99.97
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	99.97
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	99.97
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	99.97
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.97
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	99.97
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.97
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	99.97
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	99.96
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	99.96
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	99.96
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.96
3hmu_A	472	Aminotransferase, class III; structural genomics,	99.96
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.96
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	99.96
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	99.96
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	99.96
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	99.96
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	99.96
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.96
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	99.96
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	99.96
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.96
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	99.96
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	99.96
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	99.96
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.96
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	99.96
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	99.96
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.96
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	99.96
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	99.96
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	99.96
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.96
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	99.96
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	99.96
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.95
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.95
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.95
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	99.95
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	99.95
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	99.95
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	99.95
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	99.95
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.95
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	99.95
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.95
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.95
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	99.95
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.94
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	99.94
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.94
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.94
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	99.93
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.93
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.93
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.93
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	99.93
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.93
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.92
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	99.92
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	99.92
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	99.92
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	99.92
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	99.85
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	99.9
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	99.9
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	99.9
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	99.9
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.9
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	99.9
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.89
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	99.88
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.87
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	99.86
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	99.86
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	99.86
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	99.85
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.81
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	99.73
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	99.72
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	99.65
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	99.64
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.63
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	99.5
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.37

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=100.00  E-value=1.9e-49  Score=384.81  Aligned_cols=349  Identities=31%  Similarity=0.470  Sum_probs=305.4

Q ss_pred             HHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCC
Q 014594           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLES  146 (422)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~  146 (422)
                      ++.++++.+|.++.....+..+++.  .++|+|+.|++++++++++.+++.+ +....+||+++..++|+++++++++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~   84 (363)
T 3ffh_A            7 KKSLAGLSSYKPGKREEEVMAELGL--TKITKLSSNENPLGTSKKVAAIQANSSVETEIYPDGWASSLRKEVADFYQLEE   84 (363)
T ss_dssp             CGGGTTCCC----CHHHHHHHTTTC--SCCEECSSCSCTTCCCHHHHHHHHTCBSCCCBC----CHHHHHHHHHHHTCCG
T ss_pred             hHHHHhCCCCCCCCCHHHHHHhcCC--CceEEccCCCCCCCCCHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHhCCCh
Confidence            5567778888877777777777765  5789999999999999999999987 444467888888999999999999999


Q ss_pred             CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeC
Q 014594          147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS  226 (422)
Q Consensus       147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~  226 (422)
                      ++|++|+|++++++.++++++++||+|+++.|+|..+...++..|++++.++.++++.+|++++++.++ +++++|++++
T Consensus        85 ~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~  163 (363)
T 3ffh_A           85 EELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHDLEGMLNAID-EKTTIVWICN  163 (363)
T ss_dssp             GGEEEESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCTTSCCCHHHHHHHCC-TTEEEEEEES
T ss_pred             hhEEEeCCHHHHHHHHHHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCCCCCcCHHHHHHhcc-cCCCEEEEeC
Confidence            999999999999999999999999999999999999999999999999999987788999999999997 6899999999


Q ss_pred             CCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCC--chhhhhhcCCcEEEEccChhhhccccccceeeecCHHH
Q 014594          227 PNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (422)
Q Consensus       227 p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~--~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~  301 (422)
                      |+||||.+++.+++.+|++.   |+++|+||+|.+|.++.  .........+++++++||||.+|++|+|+||+++++++
T Consensus       164 p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~  243 (363)
T 3ffh_A          164 PNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEI  243 (363)
T ss_dssp             SCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHH
T ss_pred             CCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCHHH
Confidence            99999999999999999985   89999999999887521  23344456789999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHH
Q 014594          302 IEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD  380 (422)
Q Consensus       302 ~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~  380 (422)
                      ++.+.....+++.+.+.+.++.++|++.++++ .+++++++++++.+.|+++..+.+.++.++|+|++++.  +.+++.+
T Consensus       244 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~  321 (363)
T 3ffh_A          244 IRQLNIVRPPFNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKLYPANGNFVLIDLGI--EAGTIFS  321 (363)
T ss_dssp             HHHHHHTCCSCCCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCCSSEEEEECSS--CHHHHHH
T ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCCceECCCCCeEEEEECCC--CHHHHHH
Confidence            99999988899999999999999999888888 99999999999999999954466678889999999974  7899999


Q ss_pred             HHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          381 DLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       381 ~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .|.++||.++++..++.++++||+++++++++++.++|+++
T Consensus       322 ~l~~~gi~v~~g~~~~~~~~iRis~~~~~~i~~~~~~l~~~  362 (363)
T 3ffh_A          322 YLEKNGYITRSGAALGFPTAVRITIGKEEDNSAVIALLEKL  362 (363)
T ss_dssp             HHHHTTEECEETTTTTCTTEEEEECCCHHHHHHHHHHHHHH
T ss_pred             HHHHCCeEEEeCccCCCCCeEEEECCCHHHHHHHHHHHHHh
Confidence            99999999999887767899999999888889999988764

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=100.00  E-value=2.5e-49  Score=384.31  Aligned_cols=347  Identities=29%  Similarity=0.505  Sum_probs=309.8

Q ss_pred             HHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCC
Q 014594           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLES  146 (422)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~  146 (422)
                      +++++++.+|.++.....++++++.  +++|+|+.|++++++++.+++++.+ +....+|+++...++|+++++++++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~   82 (365)
T 3get_A            5 NEFLNNLSNYEPGKDIEVIAKEYGV--KEVIKLASNENPFGTPPKAIECLRQNANKAHLYPDDSMIELKSTLAQKYKVQN   82 (365)
T ss_dssp             CGGGGGSCCCCCCCCHHHHHHHTTC--SCCEECSSCCCTTCSCHHHHHHHHHHGGGTTSCCCTTCHHHHHHHHHHHTCCG
T ss_pred             chhHhhcCCCCCCCCHHHHHHhcCC--CceEEecCCCCCCCCCHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHhCCCc
Confidence            4667788899888888888888876  6789999999999999999999987 444477877755899999999999989


Q ss_pred             CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC-CCCCCCCHHHHHHHhhcCCCeEEEEe
Q 014594          147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLT  225 (422)
Q Consensus       147 ~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~  225 (422)
                      ++|++|+|++++++.++++++++||+|+++.|+|..+...++..|++++.++. ++++ +|+++++++++ +++++|+++
T Consensus        83 ~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~-~~~~~v~~~  160 (365)
T 3get_A           83 ENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNL-DEFKKLYETHK-DEIKLIFLC  160 (365)
T ss_dssp             GGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSSSSCCH-HHHHHHHHHTT-TTEEEEEEE
T ss_pred             ceEEECCCHHHHHHHHHHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecCCCCC-CCHHHHHHHhC-CCCCEEEEc
Confidence            99999999999999999999999999999999999999999999999999997 6677 99999999997 789999999


Q ss_pred             CCCCccCcCCCHHHHHHHHcC---CCeEEEccCCcccc---CCC---chhhhhhcCCcEEEEccChhhhccccccceeee
Q 014594          226 SPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFS---GLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA  296 (422)
Q Consensus       226 ~p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~---~~~---~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~  296 (422)
                      +|+||||.+++.+++.+|++.   |+++|+||+|.++.   .+.   +........+++++++||||.+|++|+|+||++
T Consensus       161 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~  240 (365)
T 3get_A          161 LPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGI  240 (365)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEE
T ss_pred             CCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEE
Confidence            999999999999999999984   99999999999877   322   233444567899999999999999999999999


Q ss_pred             cCHHHHHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCH
Q 014594          297 FPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDA  375 (422)
Q Consensus       297 ~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~  375 (422)
                      +++++++.+......++.+.+.+.++.++|++.++++ .+++++++++++.+.|++++ +.+.++.++|+|++++.. +.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~~~~~~~~~~~-~~  318 (365)
T 3get_A          241 ANANIISAFYKLRAPFNVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKHN-IKIIDSYTNFITYFFDEK-NS  318 (365)
T ss_dssp             ECHHHHHHHHHHSCTTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHTT-CEECCCSSSEEEEECSSS-CH
T ss_pred             cCHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEECCCCCeEEEEECCCC-CH
Confidence            9999999999998899999999999999999888888 99999999999999999985 566788899999999855 88


Q ss_pred             HHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          376 KKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       376 ~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .++.+.|.++||.++++..++ ++++||+++++++++++.++|+++
T Consensus       319 ~~~~~~l~~~gi~v~~g~~~~-~~~iRis~~~~~~i~~l~~~l~~~  363 (365)
T 3get_A          319 TDLSEKLLKKGIIIRNLKSYG-LNAIRITIGTSYENEKFFTEFDKI  363 (365)
T ss_dssp             HHHHHHHHTTTEECEECGGGT-CSEEEEECCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCEEEEECccCC-CCEEEEEcCCHHHHHHHHHHHHHH
Confidence            999999999999999988765 899999999988899999988764

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=100.00  E-value=1.6e-49  Score=384.79  Aligned_cols=337  Identities=31%  Similarity=0.538  Sum_probs=292.0

Q ss_pred             HHHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHcCCC
Q 014594           66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE  145 (422)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~la~~~~~~  145 (422)
                      ++++.+.++.+|.+....         ...++|+|+.|+|+++++|.+     .+....+||+++..++|++++++++++
T Consensus         9 ~~~~~~~~~~~~~~~~~~---------~~~~~i~l~~~~~~~~~~~~v-----a~~~~~~Y~~~~~~~lr~~la~~~~~~   74 (356)
T 1fg7_A            9 LARENVRNLTPYQSARRL---------GGNGDVWLNANEYPTAVEFQL-----TQQTLNRYPECQPKAVIENYAQYAGVK   74 (356)
T ss_dssp             HSCHHHHHCCCCCCCCCC---------TTTCSEECSSCCCSSCCCCCC-----CCCCTTSCCCSSCHHHHHHHHHHHTSC
T ss_pred             HhhHHHHhcCCCCCCccc---------CCCceEEeeCCCCCCCCCHhH-----hhhhhccCCCccHHHHHHHHHHHhCCC
Confidence            356778888887654321         124689999999999988876     223346798888899999999999999


Q ss_pred             CCCEEEeCCHHHHHHHHHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEE
Q 014594          146 SDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL  224 (422)
Q Consensus       146 ~~~i~~~~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l  224 (422)
                      +++|++|+|++++++.++++++++| |+|+++.|+|+.+...++..|++++.++.++++.+|++++++.++  ++++|++
T Consensus        75 ~~~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~--~~~~v~l  152 (356)
T 1fg7_A           75 PEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLD--GVKVVYV  152 (356)
T ss_dssp             GGGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHHHHTSCT--TEEEEEE
T ss_pred             hHHEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHHhc--CCCEEEE
Confidence            8999999999999999999999999 999999999999999999999999999987778899999999886  7899999


Q ss_pred             eCCCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHH
Q 014594          225 TSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (422)
Q Consensus       225 ~~p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~  301 (422)
                      ++||||||.+++.+++.+|++.   |+++|+||+|.+|....+.....+..+++++++||||.||++|+|+||+++++++
T Consensus       153 ~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~  232 (356)
T 1fg7_A          153 CSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEV  232 (356)
T ss_dssp             ESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECHHH
T ss_pred             eCCCCCCCCCCCHHHHHHHHHhCCCCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCHHH
Confidence            9999999999999999998875   8999999999988732233333345688999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCcHHHHHHHHHHccCChH--HH-HHHHHHHHHHHHHHHHccCCCC-cccCCCceEEEEEeCCCCCHHH
Q 014594          302 IEYLWRAKQPYNVSVAAEVAACAALQNPIY--LE-VKEALIKERERLFKLLKDVPFL-NPYPSYSNFILCEVTSGMDAKK  377 (422)
Q Consensus       302 ~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~--~~-~~~~~~~~~~~l~~~L~~~~~~-~~~p~~~~f~~~~~~~~~~~~~  377 (422)
                      ++.+.....+|+.|.++|.++.++|++.++  ++ .+++++++++++.+.|++++.+ .+.|+.++|+|++++   +..+
T Consensus       233 ~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~---~~~~  309 (356)
T 1fg7_A          233 INLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK---ASSA  309 (356)
T ss_dssp             HHHHHHHSCSSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET---THHH
T ss_pred             HHHHHHhcCCCCCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECC---CHHH
Confidence            999999888899999999999999987655  67 8889999999999999998743 456788999999996   6889


Q ss_pred             HHHHHHhCCcEEEe-CCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          378 LKDDLAKMGVMIRH-YNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       378 ~~~~L~~~gI~v~~-~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +.+.|.++||.+++ +..++.++++||+++++++++++.++++.+
T Consensus       310 l~~~L~~~gI~v~~~g~~~~~~~~iRis~~~~~e~~~~~~~l~~~  354 (356)
T 1fg7_A          310 VFKSLWDQGIILRDQNKQPSLSGCLRITVGTREESQRVIDALRAE  354 (356)
T ss_dssp             HHHHHHHTTEECEECTTSTTCTTEEEEECCCHHHHHHHHHHHHTC
T ss_pred             HHHHHHHCCEEEEECCCCCCCCCeEEEEeCCHHHHHHHHHHHHhh
Confidence            99999999999999 665666789999999988899999998875

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=100.00  E-value=1.4e-47  Score=370.36  Aligned_cols=325  Identities=26%  Similarity=0.391  Sum_probs=291.5

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD  171 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd  171 (422)
                      .++++|+|+.|++++++++++++++.+ +.....||+++..++|+++++++++++++|++|+|+++++..++++++++||
T Consensus        14 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd   93 (354)
T 3ly1_A           14 STDNPIRINFNENPLGMSPKAQAAARDAVVKANRYAKNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAYASLEA   93 (354)
T ss_dssp             CSSSCEECSSCCCSSCCCHHHHHHHHHTGGGTTSCCHHHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHHHHHCCTTC
T ss_pred             CCCceEEccCCCCCCCCCHHHHHHHHHHHhhCcCCCCCchHHHHHHHHHHhCCChHHEEEeCChHHHHHHHHHHHhCCCC
Confidence            457789999999999999999999987 4445778888889999999999999999999999999999999999999999


Q ss_pred             EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-CCCeEEEEeCCCCccCcCCCHHHHHHHHcC---C
Q 014594          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM---P  247 (422)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~---~  247 (422)
                      +|+++.|+|..+...++..|++++.++.++++.+|++++++.+++ +++++|++++|+||||.+++.+++.+|++.   |
T Consensus        94 ~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~  173 (354)
T 3ly1_A           94 QLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPAN  173 (354)
T ss_dssp             EEEEESSSCTHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTT
T ss_pred             eEEECCCCchHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCC
Confidence            999999999999999999999999999877889999999999975 689999999999999999999999999886   8


Q ss_pred             CeEEEccCCccccCCC---chhhhhhcC-CcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHH
Q 014594          248 ILVVLDEAYTEFSGLE---SRMEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAAC  323 (422)
Q Consensus       248 ~~li~Deay~~~~~~~---~~~~~~~~~-~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~  323 (422)
                      +++|+||+|.++.+++   +........ +++++++||||.+|++|+|+||+++++++++.+......++.+.+.+.++.
T Consensus       174 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  253 (354)
T 3ly1_A          174 TMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYVAGEKINFSGVDAAL  253 (354)
T ss_dssp             EEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHHHHGGGTTCSCCCHHHHHHHH
T ss_pred             eEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence            9999999999987654   334444455 889999999999999999999999999999999988888999999999999


Q ss_pred             HHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEE
Q 014594          324 AALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVR  402 (422)
Q Consensus       324 ~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iR  402 (422)
                      ++|++.++++ .+++++++++++.+.|++++ +.+.++.++|+|++++.  +.+++.+.|.++||.++ +..++.++++|
T Consensus       254 ~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~-g~~~~~~~~iR  329 (354)
T 3ly1_A          254 ASMNDSAFITYSKKSNDVSRQILLKALEDLK-LPYLPSEGNFVFHQLVV--PLKDYQTHMADAGVLIG-RAFPPADNWCR  329 (354)
T ss_dssp             HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHT-CCBCCCCSSEEEEECSS--CHHHHHHHHHHTTEECC-CCCTTCTTEEE
T ss_pred             HHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeECCCCceEEEEECCC--CHHHHHHHHHHCCEEEe-ecCCCCCCEEE
Confidence            9999888888 89999999999999999875 45567889999999974  78999999999999998 65555689999


Q ss_pred             EEecChhhHHHHHHHHhhh
Q 014594          403 VSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       403 is~~~~~~~~~l~~al~~l  421 (422)
                      |+++++++++++.++|+++
T Consensus       330 is~~~~~~i~~~~~~l~~~  348 (354)
T 3ly1_A          330 ISLGTPQEMQWVADTMREF  348 (354)
T ss_dssp             EECCCHHHHHHHHHHHHHH
T ss_pred             EEcCCHHHHHHHHHHHHHH
Confidence            9999888888888888754

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=100.00  E-value=2.4e-47  Score=369.79  Aligned_cols=340  Identities=29%  Similarity=0.479  Sum_probs=296.4

Q ss_pred             HHHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHH
Q 014594           66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF----PYIYPDPESRRLRAALAK  140 (422)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~----~~~y~~~~~~~lr~~la~  140 (422)
                      ++++.++.+.+|.+...        ...+.++|+|+.|++++++++++.+++.+ +..    ..+||+++..++|+++++
T Consensus         5 ~~~~~~~~~~~~~~~~~--------~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~lr~~la~   76 (360)
T 3hdo_A            5 PLRQNIASMKGYIPGYQ--------PPDIASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSASSQKLREVAGE   76 (360)
T ss_dssp             CCCHHHHHCCCCCCCCC--------CSCCTTSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCSSCHHHHHHHHH
T ss_pred             hhHHHHHhcCCcCCCCC--------CccccceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCCCchHHHHHHHHH
Confidence            35778888888865432        12346799999999999999999999986 333    367887778999999999


Q ss_pred             HcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCe
Q 014594          141 DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPK  220 (422)
Q Consensus       141 ~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~  220 (422)
                      ++|+++++|++|+|++++++.++++++++||+|+++.|+|..+...++..|++++.++.++++.+  +++++.   .+++
T Consensus        77 ~~g~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~l~~~---~~~~  151 (360)
T 3hdo_A           77 LYGFDPSWIIMANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGDFRI--AGFPER---YEGK  151 (360)
T ss_dssp             HHTCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCTTSSB--TTCCSS---BCSS
T ss_pred             HhCcCcceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCCCCCH--HHHHhh---cCCC
Confidence            99999999999999999999999999999999999999999999999999999999998666555  444333   3568


Q ss_pred             EEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCH
Q 014594          221 CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (422)
Q Consensus       221 ~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~  299 (422)
                      ++++++|+||||.+++.+++.+|++. |+++|+||+|.+|... .........+++++++||||.+|++|+|+||+++++
T Consensus       152 ~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~  230 (360)
T 3hdo_A          152 VFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAES-NALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARP  230 (360)
T ss_dssp             EEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSC-CCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCH
T ss_pred             EEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCc-chhHHhccCCCEEEEecchHhhcCCccceeeEeeCH
Confidence            99999999999999999999999987 9999999999988543 344445567899999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHH
Q 014594          300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL  378 (422)
Q Consensus       300 ~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~  378 (422)
                      ++++.+......++.+++.+.++.++|++.++++ .+++++++++++.+.|++++ +.+.++.++|+|++++ +.+.+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~-~~~~~~l  308 (360)
T 3hdo_A          231 EVIAALDKIRDHYNLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSIG-YDVIPSQGNYLFATPP-DRDGKRV  308 (360)
T ss_dssp             HHHHHHHHHSCSCCSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTT-CEECCCSSSEEEEECT-TCCHHHH
T ss_pred             HHHHHHHHhCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEcCCCccEEEEECC-CCCHHHH
Confidence            9999999998889999999999999999888888 99999999999999999884 5667888999999987 5688999


Q ss_pred             HHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          379 KDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       379 ~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .+.|.++||.++++..+..++++||++++++++++|.++++.+
T Consensus       309 ~~~l~~~gi~v~~~~~~~~~~~iRis~~~~~e~~~l~~al~~~  351 (360)
T 3hdo_A          309 YDGLYARKVLVRHFSDPLLAHGMRISIGTREEMEQTLAALKEI  351 (360)
T ss_dssp             HHHHHHTTEECBCCCSTTTTTSEEEECCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCEEEEECCCCCCCCEEEEEcCCHHHHHHHHHHHHHH
Confidence            9999999999999876666799999999999999999999875

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=100.00  E-value=1.1e-46  Score=365.93  Aligned_cols=340  Identities=34%  Similarity=0.537  Sum_probs=298.9

Q ss_pred             hHHHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCcchHHHHHHHHHH
Q 014594           65 SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKD  141 (422)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~~~~~~lr~~la~~  141 (422)
                      .++++.+..+.+|.+.            .++++|+|+.|++++++++++.+++.+ +.  ...+|++++..++|++++++
T Consensus        12 ~~~~~~~~~~~~~~~~------------~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~l~~~la~~   79 (367)
T 3euc_A           12 RIIRDDVRAMGAYHVP------------DSHGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPVPSSEALRAKLKEV   79 (367)
T ss_dssp             HHSCHHHHHSCCSSCC------------CCTTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCC------------CCCCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCCcHHHHHHHHHHH
Confidence            4567778888887542            246789999999999999999999876 32  34678888889999999999


Q ss_pred             cCC-CCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCe
Q 014594          142 SGL-ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPK  220 (422)
Q Consensus       142 ~~~-~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~  220 (422)
                      +|+ ++++|++|+|++++++.++++++++||+|+++.|+|..+...++..|++++.++.++++.+|++++++++++.+++
T Consensus        80 ~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~  159 (367)
T 3euc_A           80 MQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPA  159 (367)
T ss_dssp             HTCCTTCEEEEEEHHHHHHHHHHHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCS
T ss_pred             hCCCCcceEEEcCCHHHHHHHHHHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCC
Confidence            998 7889999999999999999999999999999999999998889999999999998888899999999999844899


Q ss_pred             EEEEeCCCCccCcCCCHHHHHHHHc----C--CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcccccccee
Q 014594          221 CIFLTSPNNPDGSIINDEDLLKILE----M--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY  294 (422)
Q Consensus       221 ~i~l~~p~NPtG~~~~~e~l~~i~~----~--~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~  294 (422)
                      +|++++||||||.+++.+++++|++    .  |+++|+||+|.+|.+. .....+...++++++.||||. +++|+|+||
T Consensus       160 ~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~  237 (367)
T 3euc_A          160 IVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQE-SWMSRLTDFGNLLVMRTVSKL-GLAGIRLGY  237 (367)
T ss_dssp             EEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSC-CSGGGGGTCTTEEEEEECCCT-TSCSCCEEE
T ss_pred             EEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhccc-chHHHHhhCCCEEEEecchhh-cccccCcee
Confidence            9999999999999999998888864    2  5999999999998743 334455567889999999998 899999999


Q ss_pred             eecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCC
Q 014594          295 GAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGM  373 (422)
Q Consensus       295 i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~  373 (422)
                      +++++++++.+.....+++.+.+.+.++.++|++.++++ .+++++++++++.+.|++++.+.+.++.++|+|++++   
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~---  314 (367)
T 3euc_A          238 VAGDPQWLEQLDKVRPPYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVFPSAANFLLARVP---  314 (367)
T ss_dssp             EEECHHHHHHHGGGCCSSCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCEECCCSSSEEEEECS---
T ss_pred             eeeCHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCeEEEEECC---
Confidence            999999999999888889999999999999999877777 8999999999999999998666778889999999996   


Q ss_pred             CHHHHHHHHHhCCcEEEeCCC--CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          374 DAKKLKDDLAKMGVMIRHYNN--KELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       374 ~~~~~~~~L~~~gI~v~~~~~--~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +.+++.+.|.++||.++++..  ...++++||+++++++++++.++|+++
T Consensus       315 ~~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~~~~~i~~~~~~l~~~  364 (367)
T 3euc_A          315 DAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVSTPEENAQFLEAFAAS  364 (367)
T ss_dssp             CHHHHHHHHHTTTEECEECGGGCGGGTTEEEEECCCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHCCeEEEECCccCCCCCCEEEEecCCHHHHHHHHHHHHHH
Confidence            788999999999999998775  234689999999988899999988764

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=100.00  E-value=2.3e-46  Score=359.16  Aligned_cols=317  Identities=26%  Similarity=0.361  Sum_probs=278.6

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD  171 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd  171 (422)
                      .++++|+|+.|+|+++++|.+.+++.+ .....+||+++..++|+++++++++++++|++|+|+++++.++++.+  +||
T Consensus        14 ~~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~~~~~~~--~gd   91 (337)
T 3p1t_A           14 AAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSM   91 (337)
T ss_dssp             CCCCCEECSSCCCCSCCCHHHHHHHHHHGGGTTSCCTTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHS--TTS
T ss_pred             CCCCceEeeCCCCCCCCCHHHHHHHHHhhhhhccCCCCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHhc--CCC
Confidence            346789999999999999999999987 34457788888999999999999999899999999999999999977  899


Q ss_pred             EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeE
Q 014594          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILV  250 (422)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~l  250 (422)
                      +|+++.|+|..+...++..|++++.++.++++++|++++++.   .+++++++++||||||.+++.+++.+|++. +. +
T Consensus        92 ~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~---~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~  167 (337)
T 3p1t_A           92 RFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV---SRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-L  167 (337)
T ss_dssp             EEEEESSSCSHHHHHHTTSCCEEEEECBCTTSSBCHHHHTTC---CTTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-E
T ss_pred             eEEEeCCCcHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHhh---cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-E
Confidence            999999999999999999999999999888889999999876   468999999999999999999999999987 65 6


Q ss_pred             EEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccCCh
Q 014594          251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPI  330 (422)
Q Consensus       251 i~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~  330 (422)
                      |+||+|.+|......  .....+++++++||||.+|++|+|+||+++++++++.+.+....++.+.+.+.++.++|++.+
T Consensus       168 ivDea~~~~~~~~~~--~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~  245 (337)
T 3p1t_A          168 LIDETYVDYSSFRAR--GLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWFCNVGTLDLHALEAALDNDR  245 (337)
T ss_dssp             EEECTTGGGSSCSSS--CCCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHHHHHTTSCTTCSCHHHHHHHHHHHTCHH
T ss_pred             EEECCChhhcccccc--ccccCCCEEEEeeCchhccCcchheEEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHHHhCCHH
Confidence            779999988754322  122357889999999999999999999999999999998888889999999999999999866


Q ss_pred             HHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChh
Q 014594          331 YLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPE  409 (422)
Q Consensus       331 ~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~  409 (422)
                      +.+ .++++.++++++.+.|++++ +.+.++.++|+|+..+   +.+++.+.|.++||.++++..++.++++||++++++
T Consensus       246 ~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~~~~  321 (337)
T 3p1t_A          246 AREAHIAKTLAQRRRVADALRGLG-YRVASSEANFVLVENA---AGERTLRFLRERGIQVKDAGQFGLHHHIRISIGREE  321 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTT-CCBCCCSSSEEEEECT---TTHHHHHHHHHTTEECEEGGGGTCCSEEEEECCCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCc-CEECCCCCeEEEEEcC---CHHHHHHHHHHCCeEEEECccCCCCCeEEEecCCHH
Confidence            555 77778888999999999985 4566778889999886   346788888899999999887777899999999988


Q ss_pred             hHHHHHHHHhhh
Q 014594          410 HTDALMECLMHL  421 (422)
Q Consensus       410 ~~~~l~~al~~l  421 (422)
                      ++++|.++++++
T Consensus       322 ~~~~l~~al~~~  333 (337)
T 3p1t_A          322 DNDRLLAALAEY  333 (337)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999999876

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=100.00  E-value=1.5e-46  Score=367.69  Aligned_cols=326  Identities=24%  Similarity=0.366  Sum_probs=273.2

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCCc-chHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHHHH
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCGADELIDLIM  163 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~~~-~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al~~~~  163 (422)
                      .+.++|+|+.|++++++++.+.+++.+ +. ....|+.. |..++|+++++++    |  +++++|++|+|+++++++++
T Consensus        29 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~  108 (385)
T 1b5p_A           29 QGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLF  108 (385)
T ss_dssp             TTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHH
T ss_pred             cCCCEEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHH
Confidence            346789999999999989999888765 22 22568654 7899999999997    3  46789999999999999999


Q ss_pred             HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (422)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~  241 (422)
                      ++++++||+|+++.|+|..+...++..|++++.++.+  +++.+|+++++++++ .++++|+++|||||||.+++.++++
T Consensus       109 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~NPtG~~~~~~~l~  187 (385)
T 1b5p_A          109 QAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNPTGAVYPKEVLE  187 (385)
T ss_dssp             HHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCC-TTEEEEEEESSCTTTCCCCCHHHHH
T ss_pred             HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcC-CCCEEEEEeCCCCCCCCCcCHHHHH
Confidence            9999999999999999999999999999999999975  467899999999997 6799999999999999999988888


Q ss_pred             HHHcC----CCeEEEccCCccccCCCc--hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--CC
Q 014594          242 KILEM----PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN  313 (422)
Q Consensus       242 ~i~~~----~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~~  313 (422)
                      +|++.    |+++|+||+|.++.+++.  ....+.. +++++++||||.||++|+|+||+++++++++.+......  ++
T Consensus       188 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~~~~~~~~~~  266 (385)
T 1b5p_A          188 ALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAP-EHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTS  266 (385)
T ss_dssp             HHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCT-TTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHTTTCS
T ss_pred             HHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCC-CCEEEEEechhhcCCcccceEEEEeCHHHHHHHHHHHhhccCC
Confidence            77654    999999999999876431  2222223 789999999999999999999999999999988776543  57


Q ss_pred             CcHHHHHHHHHHccC----ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeC-CCCCHHHHHHHHHhCCc
Q 014594          314 VSVAAEVAACAALQN----PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT-SGMDAKKLKDDLAKMGV  387 (422)
Q Consensus       314 ~~~~~~~aa~~~L~~----~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~-~~~~~~~~~~~L~~~gI  387 (422)
                      ++.+.|.++.++|++    .++++ .+++++++++++.+.|+++++....|.+++|+|++++ .+.+..++.+.|.++||
T Consensus       267 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gv  346 (385)
T 1b5p_A          267 PDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGV  346 (385)
T ss_dssp             CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSBTTEEEEECTTTCSSHHHHHHHHHHTTE
T ss_pred             CCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecCCCCCCHHHHHHHHHHCCe
Confidence            889999999999965    46677 8899999999999999887533345667789999986 25688999999999999


Q ss_pred             EEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          388 MIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       388 ~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      .+++|..++.++++|||++..+  +++.+++++|+
T Consensus       347 ~v~~g~~f~~~~~iRis~~~~~--~~i~~~l~~l~  379 (385)
T 1b5p_A          347 AVVPGTDFAAFGHVRLSYATSE--ENLRKALERFA  379 (385)
T ss_dssp             ECEESGGGTCTTEEEEECCSCH--HHHHHHHHHGG
T ss_pred             EEecccccCCCCeEEEEecCCH--HHHHHHHHHHH
Confidence            9999877555789999999543  56888888763

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=100.00  E-value=7.2e-46  Score=359.97  Aligned_cols=342  Identities=26%  Similarity=0.401  Sum_probs=288.6

Q ss_pred             cCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHcCCCCCCEEEe
Q 014594           74 LKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVG  152 (422)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~  152 (422)
                      +.+|.++..+..++.+++.+++++|+|+.|++++++++++.+++.+. .....|++.+..++|+++++++++++++|++|
T Consensus         3 ~~~~~~g~~~~~~~~~~~~~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~l~~~la~~~~~~~~~v~~~   82 (364)
T 1lc5_A            3 LFNTAHGGNIREPATVLGISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDADYFHLHQALARHHQVPASWILAG   82 (364)
T ss_dssp             CCCCSSSCCCHHHHHHHTSCGGGSEECSSCCCTTCCCHHHHHHHHHTGGGGGSCCCTTCHHHHHHHHHHHTSCGGGEEEE
T ss_pred             CcccCCCccHHHHHHhcCCCccceEEeccccCCCCCCHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHCcCHHHEEEC
Confidence            34455555666667778877778999999999999999999998873 33467877788999999999999988999999


Q ss_pred             CCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCc
Q 014594          153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNP  230 (422)
Q Consensus       153 ~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NP  230 (422)
                      +|++++++.+++.+  +||+|+++.|+|+.+...++..|++++.++.+.  ++.+ ++++.+.+. ++++++++++|+||
T Consensus        83 ~g~~~al~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~-~~~~~v~i~~p~np  158 (364)
T 1lc5_A           83 NGETESIFTVASGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALT-PDLDCLFLCTPNNP  158 (364)
T ss_dssp             SSHHHHHHHHHHHH--CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCC-TTCCEEEEESSCTT
T ss_pred             CCHHHHHHHHHHHc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhcc-CCCCEEEEeCCCCC
Confidence            99999999999987  779999999999999999999999999999653  3333 466666665 67899999999999


Q ss_pred             cCcCCCHHHHHHHHc---C-CCeEEEccCCccccCCC-chhhhhhcCCcEEEEccChhhhccccccceeee-cCHHHHHH
Q 014594          231 DGSIINDEDLLKILE---M-PILVVLDEAYTEFSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA-FPLSIIEY  304 (422)
Q Consensus       231 tG~~~~~e~l~~i~~---~-~~~li~Deay~~~~~~~-~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~-~~~~~~~~  304 (422)
                      ||.+++.+++++|++   . |+++|+||+|.+|.+++ +.....+..++++++.|+||.+|++|+|+||++ +++++++.
T Consensus       159 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  238 (364)
T 1lc5_A          159 TGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMAR  238 (364)
T ss_dssp             TCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHH
Confidence            999999766666655   3 99999999999887643 233334456789999999999999999999999 99999999


Q ss_pred             HHHhcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH
Q 014594          305 LWRAKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA  383 (422)
Q Consensus       305 l~~~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~  383 (422)
                      +.....+++.|++.+.++.++|++.++++ .+++++++++++.+.|++++.+.+.++.++|+|+++++  +..++.+.|.
T Consensus       239 l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~--~~~~l~~~l~  316 (364)
T 1lc5_A          239 MRRQQMPWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVYPGRANYLLLRCER--EDIDLQRRLL  316 (364)
T ss_dssp             HHHHSCTTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCCSSSEEEEEESC--TTCCHHHHHH
T ss_pred             HHHhCCCCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCEECCCCCeEEEEECCC--cHHHHHHHHH
Confidence            99888889999999999999999877888 88999999999999999886566677889999999974  3457889999


Q ss_pred             hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          384 KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       384 ~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ++||.++++..+.  .++++||+++..++++++.++++++
T Consensus       317 ~~gi~v~~g~~~~~~~~~~iRis~~~~~~~~~l~~~l~~~  356 (364)
T 1lc5_A          317 TQRILIRSCANYPGLDSRYYRVAIRSAAQNERLLAALRNV  356 (364)
T ss_dssp             TTTEECEECTTSTTCCTTEEEEECCCHHHHHHHHHHHHHH
T ss_pred             HCCcEEeeCcccCCCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence            9999999987642  3689999999988888999998875

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=100.00  E-value=2e-45  Score=356.04  Aligned_cols=322  Identities=27%  Similarity=0.499  Sum_probs=284.2

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD  171 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd  171 (422)
                      +++++|||+.|++++++++++.+++.+ +.....||+++..++|+++++++++++++|++|+|++++++.+++.+    |
T Consensus        24 ~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~t~al~~~~~~~----d   99 (361)
T 3ftb_A           24 KGRELLDYSSNINPLGIPKSFLNNIDEGIKNLGVYPDVNYRRLNKSIENYLKLKDIGIVLGNGASEIIELSISLF----E   99 (361)
T ss_dssp             ----CEETTCCCCTTCSCHHHHTTHHHHHHGGGSCCCTTCHHHHHHHHHHHTCCSCEEEEESSHHHHHHHHHTTC----S
T ss_pred             CCCCEEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHc----C
Confidence            457799999999999999999988876 33346788888899999999999999999999999999999999977    8


Q ss_pred             EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC----C
Q 014594          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----P  247 (422)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~  247 (422)
                      +|+++.|+|..+...++..|++++.++.+.+.++|++++++.++ + ++++++++|+||||.+++.+++.+|++.    |
T Consensus       100 ~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~-~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~  177 (361)
T 3ftb_A          100 KILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDIISKID-D-VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKK  177 (361)
T ss_dssp             EEEEEESCCTHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHTT-T-CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHT
T ss_pred             cEEEecCChHHHHHHHHHcCCeEEEeecCcccCCCHHHHHHhcc-C-CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcC
Confidence            99999999999999999999999999987766889999999997 4 9999999999999999999998888873    9


Q ss_pred             CeEEEccCCccccCC--CchhhhhhcCCcEEEEccChhhhccccccceeee-cCHHHHHHHHHhcCCCCCcHHHHHHHHH
Q 014594          248 ILVVLDEAYTEFSGL--ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA-FPLSIIEYLWRAKQPYNVSVAAEVAACA  324 (422)
Q Consensus       248 ~~li~Deay~~~~~~--~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~-~~~~~~~~l~~~~~~~~~~~~~~~aa~~  324 (422)
                      +++|+||+|.++..+  .+........+++++++|+||.+|++|+|+||++ .++++++.+.....+++.+++.+.++.+
T Consensus       178 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (361)
T 3ftb_A          178 KTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAAIN  257 (361)
T ss_dssp             CEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCTTCSCHHHHHHHHH
T ss_pred             CEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCCCCCCHHHHHHHHH
Confidence            999999999998864  2333444567889999999999999999999999 8999999999888889999999999999


Q ss_pred             HccCChHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC--CCCCe
Q 014594          325 ALQNPIYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK--ELKGY  400 (422)
Q Consensus       325 ~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~--~~~~~  400 (422)
                      +|++.++++ .+++++++++++.+.|++++.+. +.++.++|+|+++++ .+.+++.+.|.++||.++++..+  ..+++
T Consensus       258 ~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~  336 (361)
T 3ftb_A          258 CLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHANFVLCRLEN-ISGEKLYDSLLKEDIVIRRCCNFIGLDDSF  336 (361)
T ss_dssp             TSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECCSSSEEEEEESS-SCHHHHHHHHHTTTEECEECTTSTTCCTTE
T ss_pred             HhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCeEEEEEcCC-CCHHHHHHHHHHCCeEEeeCccCCCCCCCE
Confidence            999888888 89999999999999999987776 778889999999984 68899999999889999998764  33689


Q ss_pred             EEEEecChhhHHHHHHHHhhh
Q 014594          401 VRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       401 iRis~~~~~~~~~l~~al~~l  421 (422)
                      +||++++.++++++.++++++
T Consensus       337 iRis~~~~~~~~~l~~~l~~~  357 (361)
T 3ftb_A          337 VRFAIKDEKKNTKFLRALKGV  357 (361)
T ss_dssp             EEEECCCHHHHHHHHHHHHHH
T ss_pred             EEEEcCCHHHHHHHHHHHHHH
Confidence            999999988889999999875

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=100.00  E-value=4e-45  Score=352.71  Aligned_cols=315  Identities=24%  Similarity=0.390  Sum_probs=273.6

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK  172 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~  172 (422)
                      ++++|||+.|++++++++++.+++.+ +.....||++...++|+++++++++++++|++|+|+++++.+++++++  ||+
T Consensus        14 g~~~id~~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~g~~~al~~~~~~l~--gd~   91 (350)
T 3fkd_A           14 SSEIVNFSTTVWTDGDKDHLEKHLVENLNCIRHYPEPDAGTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFR--GSR   91 (350)
T ss_dssp             --CCEECSCCSCCCSCCHHHHHHHHHTGGGGGSCCCTTCHHHHHHHHHHTTCCGGGEEEESHHHHHHHHHHHHTT--TCE
T ss_pred             cccEEEccCCCCCCCCCHHHHHHHHHhHhHHhcCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHHC--CCE
Confidence            46789999999999999999999987 333367877755899999999999999999999999999999999887  999


Q ss_pred             EEEcCCCchhHHHHHHHcCCEEEEecC-CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC--CCe
Q 014594          173 IVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PIL  249 (422)
Q Consensus       173 Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~--~~~  249 (422)
                      |+++.|+|..+...++..|++++.++. ++..++++         +++++|++++|+||||.+++.+++.+|++.  ..+
T Consensus        92 Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~---------~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~  162 (350)
T 3fkd_A           92 SLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEADF---------SNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTT  162 (350)
T ss_dssp             EEEEESCCHHHHHHHHHTTCEEEEEETTSCGGGSCC---------TTCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSE
T ss_pred             EEEeCCCcHHHHHHHHHcCCeEEEEecCCccccCcc---------CCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCE
Confidence            999999999999999999999999997 54334443         578999999999999999999999999986  479


Q ss_pred             EEEccCCccccCCCc-hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHccC
Q 014594          250 VVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN  328 (422)
Q Consensus       250 li~Deay~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~  328 (422)
                      +|+||+|.+|...+. .....+..+++++++||||.+|++|+|+||+++++++++.+.....+++++.+.+.++.++|++
T Consensus       163 li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  242 (350)
T 3fkd_A          163 FVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFSTPWAVNALAIEAAKFILIH  242 (350)
T ss_dssp             EEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTCCTTCSCHHHHHHHHHHHHC
T ss_pred             EEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCHHHHHHHHHhCCCCCCCHHHHHHHHHHHhC
Confidence            999999999876443 2344456788999999999999999999999999999999999888899999999999999988


Q ss_pred             Ch-HHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHh-CCcEEEeCCCCC--CCCeEEE
Q 014594          329 PI-YLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK-MGVMIRHYNNKE--LKGYVRV  403 (422)
Q Consensus       329 ~~-~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~-~gI~v~~~~~~~--~~~~iRi  403 (422)
                      .+ |.+ .++.. ++++++.+.|++++.+.+.++.++|+|++++.. +.+++.+.|.+ +||.++++..+.  .++++||
T Consensus       243 ~~~~~~~~~~~~-~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRi  320 (350)
T 3fkd_A          243 PAQFTLPIRKWQ-RNTVDFITALNRLDGVEVHPSGTTFFLLRLKKG-TAAELKKYMLEEYNMLIRDASNFRGLDESYVRI  320 (350)
T ss_dssp             TTTTCCCHHHHH-HHHHHHHHHHHHSTTEEECCCSSSEEEEEESSS-CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEE
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHHhcCCCcEECCCCCcEEEEECCCC-CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEE
Confidence            65 666 55444 889999999998866777888999999999865 88999999997 999999987643  3789999


Q ss_pred             EecChhhHHHHHHHHhhh
Q 014594          404 SVGKPEHTDALMECLMHL  421 (422)
Q Consensus       404 s~~~~~~~~~l~~al~~l  421 (422)
                      ++++++++++|.++++++
T Consensus       321 s~~~~~~~~~l~~al~~~  338 (350)
T 3fkd_A          321 TTQRPAQNQLFIKALETF  338 (350)
T ss_dssp             ECCCHHHHHHHHHHHHHH
T ss_pred             EcCCHHHHHHHHHHHHHH
Confidence            999988889999999876

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=100.00  E-value=6.5e-45  Score=353.95  Aligned_cols=318  Identities=28%  Similarity=0.479  Sum_probs=278.2

Q ss_pred             EEcCCCCCCCCCCHHHHHHHhc-CC----CCCCCCCcchHHHHHHHHHH------cCCCCCCEEEeCCHHHHHHHHHHHh
Q 014594           98 VKIDANENPYGPPPEVREALGQ-LK----FPYIYPDPESRRLRAALAKD------SGLESDHILVGCGADELIDLIMRCV  166 (422)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~-~~----~~~~y~~~~~~~lr~~la~~------~~~~~~~i~~~~G~~~al~~~~~~l  166 (422)
                      |||+.|++++++++++.+++.+ +.    ....|+.....++|++++++      +++++++|++|+|++++++.+++++
T Consensus        33 idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l  112 (369)
T 3cq5_A           33 IRLNTNENPYPPSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAF  112 (369)
T ss_dssp             EECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCCTTCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHH
T ss_pred             eeccCCCCCCCCCHHHHHHHHHHHHhcccccccCCCccHHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHh
Confidence            9999999999999999988875 22    13678766447999999999      5677889999999999999999999


Q ss_pred             cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC
Q 014594          167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM  246 (422)
Q Consensus       167 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~  246 (422)
                      +++||+|+++.|+|+.+...++..|++++.++.++++.+|++++++.+++.++++|++++|+||||.+++.+++.+|++.
T Consensus       113 ~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~  192 (369)
T 3cq5_A          113 GGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV  192 (369)
T ss_dssp             CSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred             cCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence            99999999999999999999999999999999877789999999999974379999999999999999999999999997


Q ss_pred             -CCeEEEccCCccccCCCchhhhhhcCC-cEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHH
Q 014594          247 -PILVVLDEAYTEFSGLESRMEWVKKHD-NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACA  324 (422)
Q Consensus       247 -~~~li~Deay~~~~~~~~~~~~~~~~~-~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~  324 (422)
                       ++++|+||+|.++..+.+.....+..+ +++++.||||.+|++|+|+||+++++++++.+.....+|+.+++.+.++.+
T Consensus       193 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~  272 (369)
T 3cq5_A          193 APGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPYHLSALSQAAAIV  272 (369)
T ss_dssp             CSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHHHHHTTSCTTCSCHHHHHHHHH
T ss_pred             CCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHHHHHHcCCCCCCCHHHHHHHHH
Confidence             899999999999875433344334456 899999999999999999999999999999998888889999999999999


Q ss_pred             HccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEE
Q 014594          325 ALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRV  403 (422)
Q Consensus       325 ~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRi  403 (422)
                      +|++.++++ .+++++++++++.+.|++.+ +.+.++.++|+|++++  .+..++.+.|.++||.++++.   .++++||
T Consensus       273 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~gi~v~~~~---~~~~iRi  346 (369)
T 3cq5_A          273 ALRHSADTLGTVEKLSVERVRVAARLEELG-YAVVPSESNFVFFGDF--SDQHAAWQAFLDRGVLIRDVG---IAGHLRT  346 (369)
T ss_dssp             HHHTHHHHHTHHHHHHHHHHHHHHHHHHHT-CEEECCSSSEEEEECC--SSHHHHHHHHHHTTEECBCCS---CTTEEEE
T ss_pred             HhcCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEECCCCCeEEEEECC--CCHHHHHHHHHHCCEEEEECC---CCCeEEE
Confidence            999877888 89999999999999998865 4555788899999986  578899999999999999872   3689999


Q ss_pred             EecChhhHHHHHHHHhhh
Q 014594          404 SVGKPEHTDALMECLMHL  421 (422)
Q Consensus       404 s~~~~~~~~~l~~al~~l  421 (422)
                      +++++++++++.++++++
T Consensus       347 s~~~~~~i~~~~~~l~~~  364 (369)
T 3cq5_A          347 TIGVPEENDAFLDAAAEI  364 (369)
T ss_dssp             ECCCHHHHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHHH
Confidence            999888888888888753

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=100.00  E-value=3.9e-45  Score=350.88  Aligned_cols=308  Identities=30%  Similarity=0.469  Sum_probs=269.0

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcCC---CCCCCCCcchHHHHHHHHHHcC---CCCCCEEEeCCHHHHHHHHHHHhcC
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQLK---FPYIYPDPESRRLRAALAKDSG---LESDHILVGCGADELIDLIMRCVLD  168 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~~---~~~~y~~~~~~~lr~~la~~~~---~~~~~i~~~~G~~~al~~~~~~l~~  168 (422)
                      .++++|+.|++++++++++.+++.+..   ..++|++.+..++|++++++++   +++++|++|+|++++++.+++++  
T Consensus        19 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~~~~~--   96 (335)
T 1uu1_A           19 RDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF--   96 (335)
T ss_dssp             CCSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCCSSCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHHHHHS--
T ss_pred             CcceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCCchHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHHHHHh--
Confidence            468999999999999999999998732   2356877778999999999999   88899999999999999999987  


Q ss_pred             CCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-C
Q 014594          169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-P  247 (422)
Q Consensus       169 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~  247 (422)
                       ||+|+++ |+|+.+...++..|++++.++.++++.+|++++      +++++|++++||||||.+++.+++.+|++. |
T Consensus        97 -gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~  168 (335)
T 1uu1_A           97 -DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNV------GEGDVVFIPNPNNPTGHVFEREEIERILKTGA  168 (335)
T ss_dssp             -SEEEECS-SSCHHHHHHHHHHTCEEEECCCCTTSCCCCCCC------CTTEEEEEESSCTTTCCCCCHHHHHHHHHTTC
T ss_pred             -CCcEEEC-CCcHHHHHHHHHcCCeEEEeccCCCCCCCHHHc------CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC
Confidence             8999999 999999999999999999999877778888776      478999999999999999999999999998 9


Q ss_pred             CeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHHHHcc
Q 014594          248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ  327 (422)
Q Consensus       248 ~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~  327 (422)
                       ++|+||+|.+|.+. +.....+..+++++++||||.+|++|+|+||+++++++++.+.....+++.|.+.+.++.++|+
T Consensus       169 -~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  246 (335)
T 1uu1_A          169 -FVALDEAYYEFHGE-SYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAKVALD  246 (335)
T ss_dssp             -EEEEECTTHHHHCC-CCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHSCTTCSCHHHHHHHHHHHH
T ss_pred             -EEEEECcchhhcch-hHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHHHHHHHHhcCCCCcCHHHHHHHHHHhC
Confidence             99999999987653 3333345567899999999999999999999999999999998888889999999999999999


Q ss_pred             CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014594          328 NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG  406 (422)
Q Consensus       328 ~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~  406 (422)
                      +.++.+ .+++++++++++.+.|++++ +.+.|++++|+|++++. .+..++.+.|.++||.++++     ++++||+++
T Consensus       247 ~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~~-----~~~iRis~~  319 (335)
T 1uu1_A          247 HREIFEERTKFIVEERERMKSALREMG-YRITDSRGNFVFVFMEK-EEKERLLEHLRTKNVAVRSF-----REGVRITIG  319 (335)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHT-CCBCCCCSSEEEEECCT-HHHHHHHHHHHHHTEEEEEE-----TTEEEEECC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCC-cEEcCCCCeEEEEECCC-CCHHHHHHHHHHCCEEEEEC-----CCeEEEEeC
Confidence            876777 88899999999999998875 45567889999999974 46778999999999999983     579999999


Q ss_pred             ChhhHHHHHHHHhhh
Q 014594          407 KPEHTDALMECLMHL  421 (422)
Q Consensus       407 ~~~~~~~l~~al~~l  421 (422)
                      ..++++++.++|+.+
T Consensus       320 ~~~~i~~~~~~l~~~  334 (335)
T 1uu1_A          320 KREENDMILRELEVF  334 (335)
T ss_dssp             CHHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHHHhh
Confidence            887777777777653

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=100.00  E-value=1.2e-44  Score=355.18  Aligned_cols=325  Identities=22%  Similarity=0.300  Sum_probs=272.8

Q ss_pred             CCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHc----C---CCCC-CEEEeCCHHHHHHH
Q 014594           92 RKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS----G---LESD-HILVGCGADELIDL  161 (422)
Q Consensus        92 ~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~-~~~~lr~~la~~~----~---~~~~-~i~~~~G~~~al~~  161 (422)
                      .+++++|+|+.|++++++++.+.+++.+ +.....|++. +..++|+++++++    |   ++++ +|++|+|++++++.
T Consensus        27 ~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~  106 (396)
T 3jtx_A           27 PEGMEAVPLHIGEPKHPTPKVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFS  106 (396)
T ss_dssp             CTTCCCEECSCCSCCSCCCHHHHHHHHHTGGGGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHH
T ss_pred             ccCCCeEEeCCcCCCCCCCHHHHHHHHHHhhhccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHH
Confidence            3467899999999999999999999987 3334678665 6899999999886    6   4588 99999999999999


Q ss_pred             HHHHhcCCC-----CEEEEcCCCchhHHHHHHHcCCEEEEecC-CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594          162 IMRCVLDPG-----DKIVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (422)
Q Consensus       162 ~~~~l~~~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (422)
                      ++++++++|     |+|+++.|+|..+...++..|++++.++. ++++.+|++++++++. +++++|++++||||||.++
T Consensus       107 ~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~-~~~~~v~l~~p~nptG~~~  185 (396)
T 3jtx_A          107 FVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVW-KRTKLVFVCSPNNPSGSVL  185 (396)
T ss_dssp             HHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHH-HTEEEEEEESSCTTTCCCC
T ss_pred             HHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhc-cCcEEEEEECCCCCCCCcC
Confidence            999999997     79999999999999999999999999996 3466789999999997 4899999999999999999


Q ss_pred             CHHHHHHHHcC----CCeEEEccCCccccCCC-chhhhh-------hcCCcEEEEccChhhhccccccceeeecCHHHHH
Q 014594          236 NDEDLLKILEM----PILVVLDEAYTEFSGLE-SRMEWV-------KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (422)
Q Consensus       236 ~~e~l~~i~~~----~~~li~Deay~~~~~~~-~~~~~~-------~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~  303 (422)
                      +.+++++|++.    |+++|+||+|.++.+++ ......       ...++++++.||||.|+++|+|+||+++++++++
T Consensus       186 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~  265 (396)
T 3jtx_A          186 DLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLK  265 (396)
T ss_dssp             CHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHHHHH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCHHHHH
Confidence            99997777653    99999999999987654 222211       1368899999999999999999999999999999


Q ss_pred             HHHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHH
Q 014594          304 YLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD  380 (422)
Q Consensus       304 ~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~  380 (422)
                      .+.....  .++.+.+.+.++.++|++.++++ .+++++++++.+.+.|+++. ....+.+++|+|++++. .+..++.+
T Consensus       266 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~  343 (396)
T 3jtx_A          266 NFLLYRTYHGSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQVF-DVKLPDASFYIWLKVPD-GDDLAFAR  343 (396)
T ss_dssp             HHHHHHHHHTCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTTS-CCCCCSSSSEEEEECTT-SCHHHHHH
T ss_pred             HHHHHHhhcccCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcC-CccCCCeeEEEEEECCC-CCHHHHHH
Confidence            8876654  47889999999999999888888 99999999999999998862 23356788999999974 57889999


Q ss_pred             HHH-hCCcEEEeCCCCC--------CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          381 DLA-KMGVMIRHYNNKE--------LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       381 ~L~-~~gI~v~~~~~~~--------~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .|. ++||.+.++..+.        ..+++||+++.+  .+++.+++++|
T Consensus       344 ~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~~--~~~i~~~l~~l  391 (396)
T 3jtx_A          344 NLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVAD--VATCVKAAEDI  391 (396)
T ss_dssp             HHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCSC--HHHHHHHHHHH
T ss_pred             HHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcCC--HHHHHHHHHHH
Confidence            886 6799999876532        368999999873  35677777665

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=100.00  E-value=2.1e-44  Score=352.98  Aligned_cols=333  Identities=20%  Similarity=0.273  Sum_probs=273.1

Q ss_pred             hHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCCc-chHHHHHHHHHHcC------CCCCCEEEeC
Q 014594           83 FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDP-ESRRLRAALAKDSG------LESDHILVGC  153 (422)
Q Consensus        83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~~~-~~~~lr~~la~~~~------~~~~~i~~~~  153 (422)
                      +...+.++...++++|+|+.|+++++++|++.+++.+ +. ....|+.. +..++|++++++++      +++++|++|+
T Consensus        19 ~~~~~~~~~~~g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~   98 (391)
T 3h14_A           19 VMEAARRAEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITP   98 (391)
T ss_dssp             HHHHHHHHHHTTCCCEECCCSSCSSCSCHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCGGGEEEES
T ss_pred             HHHHHHHHHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEec
Confidence            3334555555677899999999999999999999876 33 23567654 68999999999974      6789999999


Q ss_pred             CHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCcc
Q 014594          154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPD  231 (422)
Q Consensus       154 G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt  231 (422)
                      |++++++.++++++++||+|+++.|+|..+...++..|++++.++.+.  ++.+|++++++.    ++++|++++|+|||
T Consensus        99 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~----~~~~v~i~~p~npt  174 (391)
T 3h14_A           99 GSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL----DLAGLMVASPANPT  174 (391)
T ss_dssp             SHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS----CCSEEEEESSCTTT
T ss_pred             ChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc----CCeEEEECCCCCCC
Confidence            999999999999999999999999999999999999999999999653  467899999876    78999999999999


Q ss_pred             CcCCCHHHHHHHHcC----CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHH
Q 014594          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR  307 (422)
Q Consensus       232 G~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~  307 (422)
                      |.+++.+++++|++.    |+++|+||+|.+|.+++.........+++++++|+||.+|++|+|+||+++++++++.+..
T Consensus       175 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~  254 (391)
T 3h14_A          175 GTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVPEDQVRVVER  254 (391)
T ss_dssp             CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECCGGGHHHHHH
T ss_pred             CccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeCHHHHHHHHH
Confidence            999998877777653    9999999999998865533333334678899999999999999999999999999998876


Q ss_pred             hcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCC-CCCHHHHHHHH
Q 014594          308 AKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS-GMDAKKLKDDL  382 (422)
Q Consensus       308 ~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~-~~~~~~~~~~L  382 (422)
                      ...  .++.+.+.+.++.++|+..++++ .+++++++++.+.+.|+++++.. ..+.+++|+|++++. +.+..++.+.|
T Consensus       255 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  334 (391)
T 3h14_A          255 IAQNMFICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDLTDDSRAFAAEI  334 (391)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTTCSCHHHHHHHH
T ss_pred             HHhhhccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEEEecCccCCCHHHHHHHH
Confidence            654  46789999999999998767777 89999999999999999887655 356677899999986 56889999998


Q ss_pred             Hh-CCcEEEeCCCCC---CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          383 AK-MGVMIRHYNNKE---LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       383 ~~-~gI~v~~~~~~~---~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ++ +||.++++..+.   .++++||+++.++  +++.+++++|
T Consensus       335 ~~~~gi~v~~g~~~~~~~~~~~iRis~~~~~--~~i~~~l~~l  375 (391)
T 3h14_A          335 LEKAGVAVTPGLDFDPERGAGTLRFSYARAT--ADIEEGLDRL  375 (391)
T ss_dssp             HHHHCEECEEGGGTCTTTGGGEEEEECCSCH--HHHHHHHHHH
T ss_pred             HHHCCEEEcCchhhCCCCCCCeEEEEecCCH--HHHHHHHHHH
Confidence            75 599999987643   3689999999743  5677766654

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=6.6e-44  Score=347.59  Aligned_cols=324  Identities=19%  Similarity=0.260  Sum_probs=271.9

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhc-CCC--CCCCCCc-chHHHHHHHHHHc----CCC--CC-CEEEeCCHHHHHHH
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKF--PYIYPDP-ESRRLRAALAKDS----GLE--SD-HILVGCGADELIDL  161 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~--~~~y~~~-~~~~lr~~la~~~----~~~--~~-~i~~~~G~~~al~~  161 (422)
                      ++.++|+|+.|+++++++|.+.+++.+ +..  .+.|++. +..++|+++++++    |++  ++ +|++|+|+++++..
T Consensus        23 ~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~  102 (376)
T 2dou_A           23 RGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAH  102 (376)
T ss_dssp             TTCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHH
T ss_pred             cCCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHH
Confidence            456789999999999999999999876 322  3678774 7889999999998    764  45 99999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~  241 (422)
                      ++++++++||+|+++.|+|+.+...++..|++++.++.++++.+|++++++.++ +++++|++++|+||||.+++.++++
T Consensus       103 ~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~  181 (376)
T 2dou_A          103 LLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGVW-REAKVLLLNYPNNPTGAVADWGYFE  181 (376)
T ss_dssp             HHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECBCTTSSBCGGGSCHHHH-HHEEEEEECSSCTTTCCCCCHHHHH
T ss_pred             HHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHhhc-cCceEEEECCCCCCcCccCCHHHHH
Confidence            999999999999999999999999999999999999986667789999999886 5789999999999999999988877


Q ss_pred             HHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CC
Q 014594          242 KILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PY  312 (422)
Q Consensus       242 ~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~  312 (422)
                      +|++.    |+++|+||+|.++.+++.   .....+..+++++++||||.+|++|+|+||+++++++++.+.....  .+
T Consensus       182 ~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~  261 (376)
T 2dou_A          182 EALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERVKGVIDF  261 (376)
T ss_dssp             HHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCHHHHHHHHHHHHhccc
Confidence            77653    999999999999875432   2222233578899999999999999999999999999998876554  35


Q ss_pred             CCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCCCCCHHHHHHHHHhCCcEE
Q 014594          313 NVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMI  389 (422)
Q Consensus       313 ~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v  389 (422)
                      +.+.+.+.++.++|++ .++++ .+++++++++++.+.|+++  +.+ .+..++|+|++++++.+..++.+.|.++||.+
T Consensus       262 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v  339 (376)
T 2dou_A          262 NQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV--LSLLPPRATMYLWGRLPEGVDDLEFGLRLVERGVAL  339 (376)
T ss_dssp             CSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT--SEECCCCBSSEEEEECCTTCCHHHHHHHHHHTTEEC
T ss_pred             CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh--cCccCCCeeEEEEEECCCCCCHHHHHHHHHHCCEEE
Confidence            6889999999999988 56777 8889999999999999987  443 35567889999987778889999999889999


Q ss_pred             EeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          390 RHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       390 ~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +++..++  .++++||+++.+  .+++.+++++|
T Consensus       340 ~~g~~f~~~~~~~~Ris~~~~--~~~i~~~l~~l  371 (376)
T 2dou_A          340 APGRGFGPGGKGFVRIALVRP--LEELLEAAKRI  371 (376)
T ss_dssp             EEGGGGCGGGTTEEEEECCSC--HHHHHHHHHHH
T ss_pred             cCchhhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            9886543  368999999863  25677776654

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=100.00  E-value=8.5e-44  Score=346.59  Aligned_cols=317  Identities=21%  Similarity=0.253  Sum_probs=267.1

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc-chHHHHHHHHHHc----CC--CCCCEEEeCCHHHHHHHHHH
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDP-ESRRLRAALAKDS----GL--ESDHILVGCGADELIDLIMR  164 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~~-~~~~lr~~la~~~----~~--~~~~i~~~~G~~~al~~~~~  164 (422)
                      .+ ++|+|+.|++++++++.+.+++.+. .....|++. +..++|+++++++    |+  ++++|++|+|+++++..+++
T Consensus        22 ~g-~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~  100 (376)
T 3ezs_A           22 KK-RGLDLGIGEPQFETPKFIQDALKNHTHSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPS  100 (376)
T ss_dssp             SS-CCCBCSSCCCCSCCCHHHHHHHHTTGGGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHH
T ss_pred             cC-CEEEeCCCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHH
Confidence            44 8999999999999999999999874 333678664 6899999999987    76  78999999999999999999


Q ss_pred             HhcCC--CCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594          165 CVLDP--GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (422)
Q Consensus       165 ~l~~~--gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~  242 (422)
                      +++++  ||+|+++.|+|..+...++..|++++.++.+++.++++ ++++.+. +++++|++++||||||.+++.+++++
T Consensus       101 ~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~l~~~~~-~~~~~v~~~~p~nptG~~~~~~~l~~  178 (376)
T 3ezs_A          101 FVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTP-SLNEKEL-QEVDLVILNSPNNPTGRTLSLEELIS  178 (376)
T ss_dssp             HHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCC-CCCHHHH-HHCSEEEECSSCTTTCCCCCHHHHHH
T ss_pred             HHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcch-hHHhhhc-cCCCEEEEcCCCCCcCCCCCHHHHHH
Confidence            99999  99999999999999999999999999999765445555 6666665 47899999999999999999999988


Q ss_pred             HHcC----CCeEEEccCCccccCCCchh---hhhh-----cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC
Q 014594          243 ILEM----PILVVLDEAYTEFSGLESRM---EWVK-----KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ  310 (422)
Q Consensus       243 i~~~----~~~li~Deay~~~~~~~~~~---~~~~-----~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~  310 (422)
                      |++.    |+++|+||+|.+|.+++...   ....     ..+++++++||||.+|++|+|+||+++++++++.+.....
T Consensus       179 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~  258 (376)
T 3ezs_A          179 WVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLEKYKAFRA  258 (376)
T ss_dssp             HHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHT
T ss_pred             HHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCHHHHHHHHHHHh
Confidence            8653    99999999999988654322   2222     5788999999999999999999999999999999987765


Q ss_pred             --CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHh-CC
Q 014594          311 --PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK-MG  386 (422)
Q Consensus       311 --~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~-~g  386 (422)
                        .++.+++.+.++.++|++.++++ .+++++++++.+.+.|+  ++ . .|..++|+|++++   +..++.+.|.+ +|
T Consensus       259 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~--~~-~-~~~~~~~~~~~~~---~~~~~~~~l~~~~g  331 (376)
T 3ezs_A          259 YLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFK--NT-L-IYPYSFYVYLPVQ---NGENFAKTLYQNEG  331 (376)
T ss_dssp             TTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHST--TC-C-CCSBSSEEEEECS---CHHHHHHHHHHHHC
T ss_pred             hhcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhc--CC-C-CCCcceEEEEECC---CHHHHHHHHHHhCC
Confidence              47889999999999999988888 99999999999999998  43 3 6788999999997   78899999986 89


Q ss_pred             cEEEeCCCCC----CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          387 VMIRHYNNKE----LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       387 I~v~~~~~~~----~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      |.++++..+.    .++++||+++.+  .+++++++++|
T Consensus       332 i~v~~g~~~~~~~~~~~~iRis~~~~--~~~i~~~l~~l  368 (376)
T 3ezs_A          332 IITLPALYLGRNRIGADYVRLALVYD--TPLLEKPLEII  368 (376)
T ss_dssp             CBCEEGGGGCSTTTTTTEEEEECCSC--HHHHHHHHHHH
T ss_pred             EEEeCcHHhCCCCCCCCeEEEEEcCC--HHHHHHHHHHH
Confidence            9999876633    568999999752  24455555543

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.7e-43  Score=347.59  Aligned_cols=332  Identities=22%  Similarity=0.304  Sum_probs=268.7

Q ss_pred             HHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcC-CC--CCCCC-CcchHHHHHHHHHHc----CC--CC-CCEEEeCCH
Q 014594           87 SIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KF--PYIYP-DPESRRLRAALAKDS----GL--ES-DHILVGCGA  155 (422)
Q Consensus        87 ~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~--~~~y~-~~~~~~lr~~la~~~----~~--~~-~~i~~~~G~  155 (422)
                      +.+++.++.++|+|+.|++++++++.+.+++.+. ..  .+.|+ ..+..++|+++++++    |+  ++ ++|++|+|+
T Consensus        29 ~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~  108 (412)
T 2x5d_A           29 KMAARRRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGS  108 (412)
T ss_dssp             HHHHHHTTCCCEECSSCCCCSCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCH
T ss_pred             HHHHhhcCCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCCh
Confidence            3344445678999999999999999999999873 22  24684 567899999999998    74  66 699999999


Q ss_pred             HHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCc
Q 014594          156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (422)
Q Consensus       156 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~  233 (422)
                      ++++..++++++++||+|+++.|+|+.+...++..|++++.++.++  ++.+|+++++++++ +++++|++++||||||.
T Consensus       109 ~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~l~~p~nptG~  187 (412)
T 2x5d_A          109 KEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESI-PKPRMMILGFPSNPTAQ  187 (412)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEE-SCCSEEEEESSCTTTCC
T ss_pred             HHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcc-cCceEEEECCCCCCCCC
Confidence            9999999999999999999999999999999999999999999654  34478999999997 68999999999999999


Q ss_pred             CCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHH
Q 014594          234 IINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL  305 (422)
Q Consensus       234 ~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l  305 (422)
                      +++.+++++|++.    |+++|+||+|.++.+.+.   ....+. ..+++++++|+||.+|++|+|+||+++++++++.+
T Consensus       188 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l  267 (412)
T 2x5d_A          188 CVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSAL  267 (412)
T ss_dssp             CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCHHHHHHH
Confidence            9998887777654    999999999999875321   222222 25789999999999999999999999999999988


Q ss_pred             HHhcC--CCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCC---CHHHH
Q 014594          306 WRAKQ--PYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGM---DAKKL  378 (422)
Q Consensus       306 ~~~~~--~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~---~~~~~  378 (422)
                      .....  .++.+++.+.++.++|++ .+|++ .+++++++++++.+.|++++.....+.+++|+|++++.+.   +..++
T Consensus       268 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~  347 (412)
T 2x5d_A          268 ARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREAGWMVENPKASMYVWAKIPEPYAHLGSLEF  347 (412)
T ss_dssp             HHHHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCSBSSEEEEECCTTTGGGCHHHH
T ss_pred             HHHHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEecCCCeeeEEEEEcCCccCCCCHHHH
Confidence            76544  478899999999999986 56777 8899999999999999887533334455778999997655   78899


Q ss_pred             HHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          379 KDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       379 ~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .+.|. ++||.++++..+.  .++++||+++.+  .+++.+++++|
T Consensus       348 ~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~--~~~l~~~l~~l  391 (412)
T 2x5d_A          348 AKKLLQDAKVSVSPGIGFGDYGDDHVRFALIEN--RDRLRQAVRGI  391 (412)
T ss_dssp             HHHHHHHHCEECEEGGGGCGGGTTEEEEECCSC--HHHHHHHHHHH
T ss_pred             HHHHHHHCCEEEeCchhhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            99987 5799999886532  368999999873  35677777665

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=100.00  E-value=1.7e-43  Score=348.28  Aligned_cols=326  Identities=20%  Similarity=0.264  Sum_probs=268.7

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhc-CCC--CCCCCC-cchHHHHHHHHHHc----CCC--C-CCEEEeCCHHHHHHH
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKF--PYIYPD-PESRRLRAALAKDS----GLE--S-DHILVGCGADELIDL  161 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~--~~~y~~-~~~~~lr~~la~~~----~~~--~-~~i~~~~G~~~al~~  161 (422)
                      ++.++|+|+.|++++++++.+.+++.+ +..  ...|++ .+..++|+++++++    |++  + ++|++|+|+++++..
T Consensus        45 ~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~  124 (404)
T 2o1b_A           45 GPLPLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVA  124 (404)
T ss_dssp             CSSCCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHH
T ss_pred             CCCCEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHH
Confidence            456789999999999989999999877 322  246866 47899999999998    864  4 799999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHH
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL  240 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l  240 (422)
                      ++++++++||+|+++.|+|..+...++..|++++.++.+. ++.+|++++++.++ +++++|++++|+||||.+++.+++
T Consensus       125 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l  203 (404)
T 2o1b_A          125 VPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQII-DKTKLIYLTYPNNPTGSTATKEVF  203 (404)
T ss_dssp             HHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHH-HHEEEEEECSSCTTTCCCCCHHHH
T ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCcccCcCCHHHHHHhhc-cCceEEEEcCCCCCCCccCCHHHH
Confidence            9999999999999999999999999999999999999654 56789999999886 578999999999999999998777


Q ss_pred             HHHHc---C-CCeEEEccCCccccCCCch--hhhh-hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--C
Q 014594          241 LKILE---M-PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--P  311 (422)
Q Consensus       241 ~~i~~---~-~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~  311 (422)
                      ++|++   . |+++|+||+|.++.+++..  .... ...+++++++||||.+|++|+|+||+++++++++.+.....  .
T Consensus       204 ~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~  283 (404)
T 2o1b_A          204 DEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTHTN  283 (404)
T ss_dssp             HHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCHHHHHHHHHHHhhcc
Confidence            66654   4 9999999999998754321  1111 12367899999999999999999999999999998876544  4


Q ss_pred             CCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-hCCcE
Q 014594          312 YNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVM  388 (422)
Q Consensus       312 ~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~  388 (422)
                      ++.+.+.+.++.++|++ .++++ .+++++++++++.+.|++++.....+.+++|+|++++.+.+..++.+.|. ++||.
T Consensus       284 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~~gi~  363 (404)
T 2o1b_A          284 AGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKADLPFVHAKGGIYVWLETPPGYDSEQFEQFLVQEKSIL  363 (404)
T ss_dssp             CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEECCCBSSEEEEECCTTCCHHHHHHHHHHHHCEE
T ss_pred             CCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCCcceEEEEeCCCCCCHHHHHHHHHHHCCEE
Confidence            68899999999999987 56777 88899999999999999885333345567789999987678889999987 68999


Q ss_pred             EEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          389 IRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       389 v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ++++..+.  .++++||+++.++  +++.+++++|
T Consensus       364 v~~g~~f~~~~~~~iRis~~~~~--e~l~~~l~~l  396 (404)
T 2o1b_A          364 VAPGKPFGENGNRYVRISLALDD--QKLDEAAIRL  396 (404)
T ss_dssp             CEESGGGCGGGTTEEEEECCSCT--THHHHHHHHH
T ss_pred             EeCchhhCcCCCCeEEEEEcCCH--HHHHHHHHHH
Confidence            99987543  3689999998643  4566666654

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=1e-42  Score=341.00  Aligned_cols=322  Identities=23%  Similarity=0.336  Sum_probs=268.3

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCCc-chHHHHHHHHHHc----CC--CCCCEEEeCCHHHHHHHHH
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDP-ESRRLRAALAKDS----GL--ESDHILVGCGADELIDLIM  163 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~~~-~~~~lr~~la~~~----~~--~~~~i~~~~G~~~al~~~~  163 (422)
                      .++++|+|+.|++++++++.+.+++.+ +. ....|+.. +..++|+++++++    |+  ++++|++|+|+++++..++
T Consensus        39 ~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~  118 (389)
T 1o4s_A           39 KGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAF  118 (389)
T ss_dssp             TTCCCEECCCSSCSSCCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHH
T ss_pred             cCCCEEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHH
Confidence            356789999999998888999998876 32 23568654 7899999999997    65  6789999999999999999


Q ss_pred             HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (422)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~  241 (422)
                      ++++++||+|+++.|+|+.+...++..|++++.++.+.  ++.+|++++++.++ .++++|++++|+||||.+++.++++
T Consensus       119 ~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~nptG~~~~~~~l~  197 (389)
T 1o4s_A          119 MALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLV-GKTKAVLINSPNNPTGVVYRREFLE  197 (389)
T ss_dssp             HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCC-TTEEEEEEESSCTTTCCCCCHHHHH
T ss_pred             HHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc-cCceEEEEcCCCCCCCCCCCHHHHH
Confidence            99999999999999999999999999999999999753  57899999999997 5899999999999999999977776


Q ss_pred             HHHcC----CCeEEEccCCccccCCCc--hhhhhhc-CCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CC
Q 014594          242 KILEM----PILVVLDEAYTEFSGLES--RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PY  312 (422)
Q Consensus       242 ~i~~~----~~~li~Deay~~~~~~~~--~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~  312 (422)
                      +|++.    |+++|+||+|.++.+++.  ....+.. .+++++++||||.+|++|+|+||+++++++++.+.....  .+
T Consensus       198 ~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~~~~l~~~~~~~~~  277 (389)
T 1o4s_A          198 GLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSHTTS  277 (389)
T ss_dssp             HHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHhhhccc
Confidence            66553    999999999999876432  2222322 578999999999999999999999999999988876554  47


Q ss_pred             CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEE
Q 014594          313 NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIR  390 (422)
Q Consensus       313 ~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~  390 (422)
                      +.+.+.+.++.++|++.  .+ .+++++++++++.+.|+++++....+.+++|+|++++  .+..++.+.|. ++||.++
T Consensus       278 ~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~~gi~v~  353 (389)
T 1o4s_A          278 CINTVAQYAALKALEVD--NSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFKVR--GDDVKFCERLLEEKKVALV  353 (389)
T ss_dssp             SCCHHHHHHHHHHTTCC--CHHHHHHHHHHHHHHHHHHHHTTCCCCCCSBSSEEEEECS--SCHHHHHHHHHHHHCEECE
T ss_pred             CCCHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHhcCCeeecCCcceEEEEeCC--CCHHHHHHHHHHHCCEEEe
Confidence            78899999999999876  45 8889999999999999987533334566788999986  57889999997 8999999


Q ss_pred             eCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          391 HYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       391 ~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ++..+..++++||+++..  .+++.+++++|
T Consensus       354 ~g~~f~~~~~~Ris~~~~--~~~l~~~l~~l  382 (389)
T 1o4s_A          354 PGSAFLKPGFVRLSFATS--IERLTEALDRI  382 (389)
T ss_dssp             EGGGGTCTTEEEEECCSC--HHHHHHHHHHH
T ss_pred             CchhcCCCCeEEEEEeCC--HHHHHHHHHHH
Confidence            987655567999999863  35677777665

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=100.00  E-value=7.2e-43  Score=341.57  Aligned_cols=348  Identities=21%  Similarity=0.316  Sum_probs=278.2

Q ss_pred             HhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCCc-chHHHHHHHHHHc----
Q 014594           70 HLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDP-ESRRLRAALAKDS----  142 (422)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~~~-~~~~lr~~la~~~----  142 (422)
                      .+..+.++ +...+.....+....+.++++|+.|++++++++.+.+++.+ +. ....|+.. +..++|+++++++    
T Consensus         6 ~~~~~~~~-~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~   84 (388)
T 1j32_A            6 RVESVSPS-MTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDN   84 (388)
T ss_dssp             HHHTSCCC-SSTTTHHHHHHHHTTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred             HhHhCCcc-HHHHHHHHHHHHHhcCCCEEECCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence            34444444 23334444444444567789999999999889999988876 32 23568654 7899999999987    


Q ss_pred             C--CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCC
Q 014594          143 G--LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREK  218 (422)
Q Consensus       143 ~--~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~  218 (422)
                      |  +++++|++|+|+++++..++++++++||+|+++.|+|+.+...++..|++++.++.+.  ++.+|++++++.++ ++
T Consensus        85 g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~  163 (388)
T 1j32_A           85 GLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAIT-PK  163 (388)
T ss_dssp             CCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCC-TT
T ss_pred             CCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcC-cC
Confidence            4  4678999999999999999999999999999999999999999999999999999753  67899999999997 68


Q ss_pred             CeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhh--cCCcEEEEccChhhhcccc
Q 014594          219 PKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK--KHDNLIVLRTFSKRAGLAG  289 (422)
Q Consensus       219 ~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~--~~~~~i~~~S~SK~~~~~G  289 (422)
                      +++|++++|+||||.+++.+++++|++.    |+++|+||+|.++.+++.   ....+.  ..++++++.|+||.+|++|
T Consensus       164 ~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G  243 (388)
T 1j32_A          164 TKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTG  243 (388)
T ss_dssp             EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTT
T ss_pred             ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcc
Confidence            9999999999999999997777776653    999999999999876432   122221  1457899999999999999


Q ss_pred             ccceeeecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceE
Q 014594          290 LRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNF  364 (422)
Q Consensus       290 ~r~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f  364 (422)
                      +|+||+++++++++.+.....  .++.+.+.+.++.++|+. .++++ .+++++++++++.+.|++++.+.+ .+.+++|
T Consensus       244 ~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~  323 (388)
T 1j32_A          244 WRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAFY  323 (388)
T ss_dssp             TCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCCBTTE
T ss_pred             cceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCeeEE
Confidence            999999999999988876543  467889999999888874 46777 889999999999999998854554 4556778


Q ss_pred             EEEEeCC-CCCHHHHHHHHHh-CCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          365 ILCEVTS-GMDAKKLKDDLAK-MGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       365 ~~~~~~~-~~~~~~~~~~L~~-~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +|++++. +.+..++.+.|.+ +||.++++..+..++++||+++..+  +++.+++++|
T Consensus       324 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~--~~i~~~~~~l  380 (388)
T 1j32_A          324 MFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDL--DTIKRGMERL  380 (388)
T ss_dssp             ECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCH--HHHHHHHHHH
T ss_pred             EEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEecCCH--HHHHHHHHHH
Confidence            8888864 4678899999985 7999999876555789999998533  5566666654

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=100.00  E-value=2.1e-42  Score=338.10  Aligned_cols=325  Identities=19%  Similarity=0.318  Sum_probs=269.9

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCCc-chHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR  164 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y~~~-~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~~~~~  164 (422)
                      .++|+|+.+++++++++.+.+++.+ +.. ...|+.. +..++|+++++++    |  ++++ +|++|+|+++++..+++
T Consensus        30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~  109 (386)
T 1u08_A           30 HQAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAIT  109 (386)
T ss_dssp             TTCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHH
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHH
Confidence            3579999999998889999999876 322 3568654 7899999999995    5  5678 99999999999999999


Q ss_pred             HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (422)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i  243 (422)
                      +++++||+|+++.|+|+.+...++..|++++.++.+. ++.+|++++++.++ +++++|++++|+||||.+++.+++++|
T Consensus       110 ~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~i  188 (386)
T 1u08_A          110 ALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLS-ERTRLVILNTPHNPSATVWQQADFAAL  188 (386)
T ss_dssp             HHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             HhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhc-ccCEEEEEeCCCCCCCccCCHHHHHHH
Confidence            9999999999999999999999999999999999754 57899999999996 689999999999999999998777666


Q ss_pred             Hc---C-CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCC
Q 014594          244 LE---M-PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN  313 (422)
Q Consensus       244 ~~---~-~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~  313 (422)
                      ++   . |+++|+||+|.+|.+++.   ....+. ..++++++.|+||.+|++|+|+||+++++++++.+.....  .++
T Consensus       189 ~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~  268 (386)
T 1u08_A          189 WQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFS  268 (386)
T ss_dssp             HHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHHHHHHHTSS
T ss_pred             HHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCHHHHHHHHHHHHhhccC
Confidence            54   4 999999999999875432   222222 3578999999999999999999999999999998876543  578


Q ss_pred             CcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCC--CCHHHHHHHHH-hCCcE
Q 014594          314 VSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG--MDAKKLKDDLA-KMGVM  388 (422)
Q Consensus       314 ~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~--~~~~~~~~~L~-~~gI~  388 (422)
                      .+.+.+.++.++|++ .++++ .+++++++++++.+.|+++++....+.+++|+|+++++.  .+..++.+.|. ++||.
T Consensus       269 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~  348 (386)
T 1u08_A          269 VNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVA  348 (386)
T ss_dssp             CCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSSSCEECCCCBSSEEEEECTTTCCSCHHHHHHHHHHHSCEE
T ss_pred             CChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCceEEEEEecCCCCCCCHHHHHHHHHHhCCEE
Confidence            889999999999986 57787 999999999999999998864333456678999999754  57889999887 78999


Q ss_pred             EEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          389 IRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       389 v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      ++++..+    ..++++||+++..  .+++.+++++|+
T Consensus       349 v~~g~~f~~~~~~~~~iRis~~~~--~~~i~~~~~~l~  384 (386)
T 1u08_A          349 AIPLSVFCADPFPHKLIRLCFAKK--ESTLLAAAERLR  384 (386)
T ss_dssp             CEEGGGGCSSCCCSCEEEEECCSC--HHHHHHHHHHHT
T ss_pred             EeCchHhCCCCCCCCEEEEEEcCC--HHHHHHHHHHHh
Confidence            9987653    2468999999863  366777777663

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.3e-43  Score=349.86  Aligned_cols=325  Identities=19%  Similarity=0.314  Sum_probs=270.5

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhc-CCC--CCCCCCc-chHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHHHH
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQ-LKF--PYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCGADELIDLIM  163 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~~--~~~y~~~-~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al~~~~  163 (422)
                      +.++|+|+.|.+++++++.+.+++.+ +..  ...|+.. |..+||+++++++    |  +++++|++|+|+++++..++
T Consensus        56 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~  135 (447)
T 3b46_A           56 GRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCL  135 (447)
T ss_dssp             TSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHH
T ss_pred             CCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHH
Confidence            45789999999999999999999876 332  2568554 7899999999997    3  46679999999999999999


Q ss_pred             HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC------------CCCCCHHHHHHHhhcCCCeEEEEeCCCCcc
Q 014594          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS------------DFSLNVELIADAVEREKPKCIFLTSPNNPD  231 (422)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~------------~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt  231 (422)
                      ++++++||+|+++.|+|+.+...++..|++++.++.+.            ++.+|+++|++.++ +++++|++++|+|||
T Consensus       136 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~npt  214 (447)
T 3b46_A          136 MGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAIT-SKTKAVIINTPHNPI  214 (447)
T ss_dssp             HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCC-TTEEEEEEESSCTTT
T ss_pred             HHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhc-cCCeEEEEeCCCCCC
Confidence            99999999999999999999999999999999998532            46899999999997 789999999999999


Q ss_pred             CcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc--hhhhh--hcCCcEEEEccChhhhccccccceeeec-CHHHH
Q 014594          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLES--RMEWV--KKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSII  302 (422)
Q Consensus       232 G~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~--~~~~~--~~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~  302 (422)
                      |.+++.+++++|++.    |+++|+||+|.++.+++.  ....+  +..++++++.|+||.++++|+|+||+++ +++++
T Consensus       215 G~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l~  294 (447)
T 3b46_A          215 GKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAELL  294 (447)
T ss_dssp             CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHHHH
T ss_pred             CcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHHHH
Confidence            999998888887764    999999999999876442  22222  2357899999999999999999999999 99999


Q ss_pred             HHHHHhc--CCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCC----
Q 014594          303 EYLWRAK--QPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG----  372 (422)
Q Consensus       303 ~~l~~~~--~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~----  372 (422)
                      +.+....  ..++.+++.|.++.++|+.   .+|++ ++++++++++++.+.|+++++....|.+++|+|++++..    
T Consensus       295 ~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~p~  374 (447)
T 3b46_A          295 SYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYTAPEGTYFVLVDFSKVKIPE  374 (447)
T ss_dssp             HHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECTTCCCCT
T ss_pred             HHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecccccCcc
Confidence            9887654  3578899999999999986   45677 889999999999999998764444577899999999742    


Q ss_pred             -----------CCHHHHHHHHH-hCCcEEEeCCCCC-------CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          373 -----------MDAKKLKDDLA-KMGVMIRHYNNKE-------LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       373 -----------~~~~~~~~~L~-~~gI~v~~~~~~~-------~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                                 .+..++++.|. ++||.+.++..+.       .++++||+++..  .++|++++++|
T Consensus       375 ~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~~--~e~l~~~~~~l  440 (447)
T 3b46_A          375 DYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKD--DAYLENAVERL  440 (447)
T ss_dssp             TCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCSC--HHHHHHHHHHG
T ss_pred             ccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeCC--HHHHHHHHHHH
Confidence                       35668888887 6899999876532       268999999864  36688888776

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=100.00  E-value=2.9e-42  Score=337.46  Aligned_cols=324  Identities=23%  Similarity=0.385  Sum_probs=269.0

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCCc-chHHHHHHHHHHc----C--CCCCC-EEEeCCHHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDP-ESRRLRAALAKDS----G--LESDH-ILVGCGADELIDLIMR  164 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~~~-~~~~lr~~la~~~----~--~~~~~-i~~~~G~~~al~~~~~  164 (422)
                      .++|+|+.|++++++++++.+++.+ +. ....|+.. +..++|+++++++    |  +++++ |++|+|+++++..+++
T Consensus        26 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~  105 (389)
T 1gd9_A           26 KDVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLS  105 (389)
T ss_dssp             SSCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHT
T ss_pred             cCeEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHH
Confidence            4689999999999889999988876 32 23568654 7899999999998    7  56789 9999999999999999


Q ss_pred             HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (422)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~  242 (422)
                      +++++||+|+++.|+|+.+...++..|++++.++.+.  ++.+|++++++.++ .++++|++++|+||||.+++.+++++
T Consensus       106 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~~~~l~~  184 (389)
T 1gd9_A          106 AFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVT-DKTRALIINSPCNPTGAVLTKKDLEE  184 (389)
T ss_dssp             TTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             HhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcC-cCceEEEEECCCCCCCcCCCHHHHHH
Confidence            9999999999999999999999999999999999653  57899999999997 58999999999999999999777777


Q ss_pred             HHcC----CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--C
Q 014594          243 ILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--Y  312 (422)
Q Consensus       243 i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~  312 (422)
                      |++.    |+++|+||+|.++.+++.   ....+. ..+++++++|+||.+|++|+|+||+++++++++.+......  +
T Consensus       185 l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~  264 (389)
T 1gd9_A          185 IADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVKFQMYNAT  264 (389)
T ss_dssp             HHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHTTTTC
T ss_pred             HHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECHHHHHHHHHHHhhhcc
Confidence            7653    999999999999876432   222222 24678999999999999999999999999999988876553  6


Q ss_pred             CCcHHHHHHHHHHccCC-h--HHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC-CCCHHHHHHHHH-hCC
Q 014594          313 NVSVAAEVAACAALQNP-I--YLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDLA-KMG  386 (422)
Q Consensus       313 ~~~~~~~~aa~~~L~~~-~--~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~-~~~~~~~~~~L~-~~g  386 (422)
                      +.+.+.+.++.++|++. .  +++ .+++++++++++.+.|+++++....+.+++|+|++++. +.+..++.+.|. ++|
T Consensus       265 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g  344 (389)
T 1gd9_A          265 CPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEAR  344 (389)
T ss_dssp             SCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHTC
T ss_pred             CCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEEeccCCCCCHHHHHHHHHHhCC
Confidence            78999999999999873 3  666 88899999999999999885333345667889999874 568899999998 899


Q ss_pred             cEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          387 VMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       387 I~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      |.++++..+.  .++++||+++..  .+++.+++++|
T Consensus       345 i~v~~g~~~~~~~~~~iRi~~~~~--~~~i~~~l~~l  379 (389)
T 1gd9_A          345 VAVVPGSAFGKAGEGYVRISYATA--YEKLEEAMDRM  379 (389)
T ss_dssp             EECEEGGGGCGGGTTBEEEECCSC--HHHHHHHHHHH
T ss_pred             EEEeCchhhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            9999886532  368999999863  35677766654

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=100.00  E-value=1.3e-42  Score=341.00  Aligned_cols=320  Identities=20%  Similarity=0.314  Sum_probs=261.7

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-CC-----CCCC-CCcchHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-KF-----PYIY-PDPESRRLRAALAKDS----G--LESDHILVGCGADELIDL  161 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~-----~~~y-~~~~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al~~  161 (422)
                      .++|+|+.|.+++++++.+.+++.+. ..     ...| +..+..++|+++++++    |  +++++|++|+|+++++..
T Consensus        35 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~  114 (398)
T 3ele_A           35 ENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSI  114 (398)
T ss_dssp             GGCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHH
T ss_pred             CCeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHH
Confidence            56899999988888999999988762 22     2567 4567899999999986    3  678999999999999999


Q ss_pred             HHHHhcCCC-CEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594          162 IMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (422)
Q Consensus       162 ~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~  239 (422)
                      ++++++++| |+|+++.|+|..+...++..|++++.+|.+ +++.+|+++++++++ +++++|++++||||||.+++.++
T Consensus       115 ~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~nptG~~~~~~~  193 (398)
T 3ele_A          115 CFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERIN-AHTRGVIINSPNNPSGTVYSEET  193 (398)
T ss_dssp             HHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCC-TTEEEEEECSSCTTTCCCCCHHH
T ss_pred             HHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhC-cCCCEEEEcCCCCCCCCCCCHHH
Confidence            999999999 999999999999999999999999999965 367899999999997 68999999999999999999888


Q ss_pred             HHHHHc----------CCCeEEEccCCccccCCCch-hhhhhcCCcEEEEccChhhhccccccceeeecCHHH------H
Q 014594          240 LLKILE----------MPILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI------I  302 (422)
Q Consensus       240 l~~i~~----------~~~~li~Deay~~~~~~~~~-~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~------~  302 (422)
                      +.+|++          .|+++|+||+|.+|.+++.. .......+++++++||||.+|++|+|+||+++++++      .
T Consensus       194 l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  273 (398)
T 3ele_A          194 IKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELY  273 (398)
T ss_dssp             HHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHH
T ss_pred             HHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHH
Confidence            886543          48999999999998865422 222345678999999999999999999999998763      3


Q ss_pred             HHHHH---hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHH
Q 014594          303 EYLWR---AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLK  379 (422)
Q Consensus       303 ~~l~~---~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~  379 (422)
                      +.+..   ....++.+.+.+.++..++++..   .+++++++++++.+.|++++.....+.+++|+|++++. .+..++.
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~  349 (398)
T 3ele_A          274 AAVCGAGRALGYVCAPSLFQKMIVKCQGATG---DINAYKENRDLLYEGLTRIGYHCFKPDGAFYMFVKALE-DDSNAFC  349 (398)
T ss_dssp             HHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC---CHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECSS-SCHHHHH
T ss_pred             HHHHHHhhhccccCCCHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHcCCeecCCCeeEEEEEEcCC-CCHHHHH
Confidence            33322   22356788899998888887654   45677888999999998876444456677889999984 4788999


Q ss_pred             HHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          380 DDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       380 ~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +.|.++||.++++..+..++++||+++.++  +++++++++|
T Consensus       350 ~~l~~~gi~v~~g~~~~~~~~iRis~~~~~--e~i~~~l~~l  389 (398)
T 3ele_A          350 EKAKEEDVLIVAADGFGCPGWVRISYCVDR--EMIKHSMPAF  389 (398)
T ss_dssp             HHHHTTTEECEESGGGTCTTEEEEECCSCH--HHHHHHHHHH
T ss_pred             HHHHHCCEEEeCccccCCCCeEEEEecCCH--HHHHHHHHHH
Confidence            999999999999887766899999998533  4555555544

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=100.00  E-value=7.2e-43  Score=339.53  Aligned_cols=317  Identities=20%  Similarity=0.290  Sum_probs=266.3

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCCc-chHHHHHHHHHHcC------CCCCCEEEeCCHHHHHHHHH
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDP-ESRRLRAALAKDSG------LESDHILVGCGADELIDLIM  163 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~~~-~~~~lr~~la~~~~------~~~~~i~~~~G~~~al~~~~  163 (422)
                      .++++|+|+.|++++++++.+.+++.+ +. ....|+.. +..++|++++++++      +++++|++|+|+++++..++
T Consensus        27 ~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~  106 (370)
T 2z61_A           27 EGKKVIHLEIGEPDFNTPKPIVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFAL  106 (370)
T ss_dssp             TTCCCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHH
T ss_pred             cCCCEEEccCCCCCCCCCHHHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHH
Confidence            456789999999999888999988876 32 23568654 78999999999974      67789999999999999999


Q ss_pred             HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (422)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i  243 (422)
                      ++++++||+|+++.|+|+.+...++..|++++.++      +|++++++.++ +++++|++++|+||||.+++.+ +.++
T Consensus       107 ~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~------~d~~~l~~~l~-~~~~~v~~~~p~nptG~~~~~~-l~~~  178 (370)
T 2z61_A          107 SSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD------FTVESLEEALS-DKTKAIIINSPSNPLGEVIDRE-IYEF  178 (370)
T ss_dssp             HHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC------SSHHHHHHHCC-SSEEEEEEESSCTTTCCCCCHH-HHHH
T ss_pred             HHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC------CCHHHHHHhcc-cCceEEEEcCCCCCcCcccCHH-HHHH
Confidence            99999999999999999999999999999999987      78999999997 5899999999999999999999 9999


Q ss_pred             HcC-CCeEEEccCCccccCCCch--hhhh-hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCCcHH
Q 014594          244 LEM-PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVA  317 (422)
Q Consensus       244 ~~~-~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~~~~  317 (422)
                      ++. |+++|+||+|.++.+++..  ...+ +..+++++++||||.+|++|+|+||+++++++++.+.....  .++.+++
T Consensus       179 ~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (370)
T 2z61_A          179 AYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDEIIEAILKLQQNLFISAPTI  258 (370)
T ss_dssp             HHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHHTSSSCHH
T ss_pred             HHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHHHHHHHHHHHhhcccCCCHH
Confidence            987 9999999999998764321  2222 24578999999999999999999999999999998876554  3688999


Q ss_pred             HHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCC
Q 014594          318 AEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYN  393 (422)
Q Consensus       318 ~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~~~~  393 (422)
                      .+.++.++|+.  .++++ .+++++++++++.+.|++++.....+.+++|+|++++.  +..++.+.|. ++||.++++.
T Consensus       259 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~gi~v~~g~  336 (370)
T 2z61_A          259 SQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGWEVNNPIGAYYVFPNIGE--DGREFAYKLLKEKFVALTPGI  336 (370)
T ss_dssp             HHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCCCCCBTTEECCBCSS--CHHHHHHHHHHHHCEECEEGG
T ss_pred             HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCcceEEEEecCC--CHHHHHHHHHHhCCEEEeCch
Confidence            99999999985  46677 88899999999999999885333345667889999874  7889999997 7899999986


Q ss_pred             CCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          394 NKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       394 ~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .+.  .++++||+++.++  +++.+++++|
T Consensus       337 ~f~~~~~~~~Ri~~~~~~--~~i~~~~~~l  364 (370)
T 2z61_A          337 GFGSKGKNYIRISYANSY--ENIKEGLERI  364 (370)
T ss_dssp             GGCGGGSSBEEEECCSCH--HHHHHHHHHH
T ss_pred             hhCCCCCCEEEEEEeCCH--HHHHHHHHHH
Confidence            543  3689999999533  5677777665

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=100.00  E-value=1.1e-42  Score=346.80  Aligned_cols=324  Identities=23%  Similarity=0.379  Sum_probs=265.1

Q ss_pred             CCeEEcCCCCCCCC--CCHHHHHHHhc-CCC----CCCCCC-cchHHHHHHHHHHc----CC-CCCCEEEeCCHHHHHHH
Q 014594           95 EDIVKIDANENPYG--PPPEVREALGQ-LKF----PYIYPD-PESRRLRAALAKDS----GL-ESDHILVGCGADELIDL  161 (422)
Q Consensus        95 ~~~i~l~~~~~~~~--~~~~v~~al~~-~~~----~~~y~~-~~~~~lr~~la~~~----~~-~~~~i~~~~G~~~al~~  161 (422)
                      +++|+|+.|.++..  +++++.+++.+ +..    ...|+. .+..+||+++++++    |+ ++++|++|+|++++++.
T Consensus        76 ~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~  155 (448)
T 3aow_A           76 SDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDL  155 (448)
T ss_dssp             SSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHH
T ss_pred             CCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHH
Confidence            46899999876543  66788887765 221    146754 47899999999999    88 78899999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhh----c-CCCeEEE-EeCCCCccCcCC
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE----R-EKPKCIF-LTSPNNPDGSII  235 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~----~-~~~~~i~-l~~p~NPtG~~~  235 (422)
                      ++++++++||+|+++.|+|..+...++..|++++.++.+++ ++|+++|++.++    + .++++|+ +++|+||||.++
T Consensus       156 ~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~  234 (448)
T 3aow_A          156 IGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE-GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTM  234 (448)
T ss_dssp             HHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCC
T ss_pred             HHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCC-CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCC
Confidence            99999999999999999999999999999999999997544 599999999986    3 3789985 569999999999


Q ss_pred             CHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh
Q 014594          236 NDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA  308 (422)
Q Consensus       236 ~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~  308 (422)
                      +.+++++|++.    |+++|+||+|.++.+++.   .+..++..+++++++||||.++ +|+|+||+++++++++.+...
T Consensus       235 ~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~~~l~~~l~~~  313 (448)
T 3aow_A          235 NEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDPGIIRKMEIA  313 (448)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEEECHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhcc-ccccEEEEEeCHHHHHHHHHH
Confidence            99877777654    999999999999876432   2333344578999999999999 999999999999999988766


Q ss_pred             cCC--CCCcHHHHHHHHHHccCC---hHHH-HHHHHHHHHHHHHHHHcc-CC-CCc-ccCCCceEEEEEeCCCCCHHHHH
Q 014594          309 KQP--YNVSVAAEVAACAALQNP---IYLE-VKEALIKERERLFKLLKD-VP-FLN-PYPSYSNFILCEVTSGMDAKKLK  379 (422)
Q Consensus       309 ~~~--~~~~~~~~~aa~~~L~~~---~~~~-~~~~~~~~~~~l~~~L~~-~~-~~~-~~p~~~~f~~~~~~~~~~~~~~~  379 (422)
                      ...  ++.+++.|.++.++|++.   ++++ +++.++++++.+.+.|++ ++ .+. ..|.+++|+|++++++.+..++.
T Consensus       314 ~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p~~g~~~~v~~~~~~~~~~l~  393 (448)
T 3aow_A          314 KQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDGIDSKKML  393 (448)
T ss_dssp             HHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSBSSEEEEECSTTCCHHHHH
T ss_pred             HHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCCCccEEEEEEcCCCCCHHHHH
Confidence            543  677999999999999875   5566 888899999999999987 44 344 35778999999998777899999


Q ss_pred             HHHHhCCcEEEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          380 DDLAKMGVMIRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       380 ~~L~~~gI~v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +.|.++||.++++..+    ..++++||+++... .+++++++++|
T Consensus       394 ~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~~~-~e~i~~~~~~L  438 (448)
T 3aow_A          394 ERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYVD-EDKIMEGIKRL  438 (448)
T ss_dssp             HHHHHTTEECEEGGGGSTTCCCCSEEEEECSSSC-THHHHHHHHHH
T ss_pred             HHHHHCCcEEEcchhhcCCCCCCCEEEEEeCCCC-HHHHHHHHHHH
Confidence            9999889999987653    24689999998632 24555555554

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=100.00  E-value=1.9e-42  Score=343.17  Aligned_cols=326  Identities=19%  Similarity=0.284  Sum_probs=270.7

Q ss_pred             CCCCeEEcCCCCCC----CCCCHHHHHHHhcC-C--CCCCC-CCcchHHHHHHHHHHcC-----CCCCCEEEeCCHHHHH
Q 014594           93 KPEDIVKIDANENP----YGPPPEVREALGQL-K--FPYIY-PDPESRRLRAALAKDSG-----LESDHILVGCGADELI  159 (422)
Q Consensus        93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~~-~--~~~~y-~~~~~~~lr~~la~~~~-----~~~~~i~~~~G~~~al  159 (422)
                      ++.++|+|+.|.+.    +++++.+.+++.+. .  ....| +..+..++|++++++++     +++++|++|+|+++++
T Consensus        52 ~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al  131 (427)
T 3dyd_A           52 PNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQAI  131 (427)
T ss_dssp             TTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHH
T ss_pred             CCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhcCCCCChHHEEEecCcHHHH
Confidence            45678999999864    68899999998762 2  23567 55689999999999998     7889999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (422)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (422)
                      +.+++.++++||+|+++.|+|..+...++..|++++.++..  .++.+|++++++.++ .++++|++++|+||||.+++.
T Consensus       132 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~nptG~~~~~  210 (427)
T 3dyd_A          132 DLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLID-EKTACLIVNNPSNPCGSVFSK  210 (427)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCC-TTEEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhc-cCCCEEEEECCCCCCCCCCCH
Confidence            99999999999999999999999999999999999999853  467899999999997 579999999999999999997


Q ss_pred             HHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecC-------HHHHH
Q 014594          238 EDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-------LSIIE  303 (422)
Q Consensus       238 e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-------~~~~~  303 (422)
                      +++++|++.    |+++|+||+|.+|.+++.   ....+....++++++||||.|+++|+|+||++++       +++++
T Consensus       211 ~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~  290 (427)
T 3dyd_A          211 RHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRD  290 (427)
T ss_dssp             HHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHH
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHH
Confidence            666666553    999999999999876442   2333444567899999999999999999999986       56777


Q ss_pred             HHHHhc-CCCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCC-----CC
Q 014594          304 YLWRAK-QPYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS-----GM  373 (422)
Q Consensus       304 ~l~~~~-~~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~-----~~  373 (422)
                      .+.... ..++.+.+.+.++.++|++  .++++ ++++++++++++.+.|++++.+. +.|++++|+|++++.     +.
T Consensus       291 ~l~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g~~~~~~l~~~~~~~~~  370 (427)
T 3dyd_A          291 GLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHFPEFE  370 (427)
T ss_dssp             HHHHHHHHHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBTTEEEEEECGGGCTTCS
T ss_pred             HHHHHHhccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEecCHhhcCCCC
Confidence            776553 2588999999999999984  56777 88999999999999999985555 468889999998862     35


Q ss_pred             CHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          374 DAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       374 ~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +..++++.|. ++||.+.++..+..++++||+++.++  +++++++++|
T Consensus       371 ~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~~~~--e~i~~~l~~l  417 (427)
T 3dyd_A          371 NDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPE--VMMLEACSRI  417 (427)
T ss_dssp             SHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESCSCH--HHHHHHHHHH
T ss_pred             CHHHHHHHHHHHCCEEEECCcccCCCCeEEEEECCCH--HHHHHHHHHH
Confidence            7788998886 89999999887667899999998543  4566666654

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=100.00  E-value=1.1e-42  Score=345.61  Aligned_cols=325  Identities=17%  Similarity=0.144  Sum_probs=273.1

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhc-CC-CC-CCCCCc-chHHHHHHHHHHcC------CCCCCEEEeCCHHHHHHHHH
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQ-LK-FP-YIYPDP-ESRRLRAALAKDSG------LESDHILVGCGADELIDLIM  163 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~-~~y~~~-~~~~lr~~la~~~~------~~~~~i~~~~G~~~al~~~~  163 (422)
                      +.++|+|+.|++++++++++.+++.+ +. .. ..|+.. +..++|++++++++      +++++|++|+|++++++.++
T Consensus        43 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~  122 (437)
T 3g0t_A           43 GTKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSF  122 (437)
T ss_dssp             TCCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHH
T ss_pred             CCCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHH
Confidence            46789999999999999999999876 32 23 567654 67999999999986      67889999999999999999


Q ss_pred             HHhc--CCCC--EEEEcCCCchhHHHHHHHcCCEEEEecC-CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHH
Q 014594          164 RCVL--DPGD--KIVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (422)
Q Consensus       164 ~~l~--~~gd--~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e  238 (422)
                      ++++  ++||  +|+++.|+|..+...++..|++++.++. ++++.+|+++++++++++++++|++++||||||.+++.+
T Consensus       123 ~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~  202 (437)
T 3g0t_A          123 LVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDE  202 (437)
T ss_dssp             HHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHH
T ss_pred             HHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHH
Confidence            9998  9999  9999999999999999999999999996 456678999999999547899999999999999999988


Q ss_pred             HHHHHHcC----CCeEEEccCCccccCCCc-hh-------hhhhc-CCcEEEEccChhhhccccccceeeecCHHHHH-H
Q 014594          239 DLLKILEM----PILVVLDEAYTEFSGLES-RM-------EWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE-Y  304 (422)
Q Consensus       239 ~l~~i~~~----~~~li~Deay~~~~~~~~-~~-------~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~-~  304 (422)
                      ++++|++.    |+++|+||+|.++.+++. ..       ..+.. .++++++.|+||.+|++|+|+||+++++++++ .
T Consensus       203 ~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  282 (437)
T 3g0t_A          203 ELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLYERE  282 (437)
T ss_dssp             HHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECHHHHHCB
T ss_pred             HHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECHHHhhhh
Confidence            87777653    999999999998775421 22       23333 78899999999999999999999999999888 6


Q ss_pred             -----------------HHHhcC--CCCCcHHHHHHHHHHccCCh-H---HH-HHHHHHHHHHHHHHHHccCCCCccc--
Q 014594          305 -----------------LWRAKQ--PYNVSVAAEVAACAALQNPI-Y---LE-VKEALIKERERLFKLLKDVPFLNPY--  358 (422)
Q Consensus       305 -----------------l~~~~~--~~~~~~~~~~aa~~~L~~~~-~---~~-~~~~~~~~~~~l~~~L~~~~~~~~~--  358 (422)
                                       +.....  .++.+.+.+.++.++|++.+ |   ++ .+++++++++.+.+.|++++ +.+.  
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~  361 (437)
T 3g0t_A          283 YPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDNG-FNIVYD  361 (437)
T ss_dssp             CGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTT-EEESSC
T ss_pred             hhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHcC-CEEecc
Confidence                             554433  47899999999999998754 3   66 99999999999999999985 4444  


Q ss_pred             -----C-CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCC--CCeEEEEec--ChhhHHHHHHHHhh
Q 014594          359 -----P-SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKEL--KGYVRVSVG--KPEHTDALMECLMH  420 (422)
Q Consensus       359 -----p-~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~--~~~iRis~~--~~~~~~~l~~al~~  420 (422)
                           | ..++|+|++++ +.+..++.+.|.++||.++++..++.  ++++||+++  +.++++++.++|++
T Consensus       362 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~  432 (437)
T 3g0t_A          362 KDGNEPLADGFYFTVGYK-GMDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQM  432 (437)
T ss_dssp             EETTEECCSSSEEEEEET-TCCHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHH
T ss_pred             ccCCCCCceeEEEEEecC-CCCHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHH
Confidence                 5 88999999998 77899999999999999999876432  378999998  45666666666654

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=100.00  E-value=3.5e-42  Score=341.36  Aligned_cols=323  Identities=19%  Similarity=0.255  Sum_probs=260.1

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcCC-------------CCCCCCCc-chHHHHHHHHHHcC--------CCCCCEEEe
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQLK-------------FPYIYPDP-ESRRLRAALAKDSG--------LESDHILVG  152 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~~-------------~~~~y~~~-~~~~lr~~la~~~~--------~~~~~i~~~  152 (422)
                      ..+|+|+.++|++++ +.+.+++.+..             ....|+++ |..++|++++++++        +++++|++|
T Consensus        36 ~~~i~l~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~  114 (428)
T 1iay_A           36 NGVIQMGLAENQLCL-DLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMA  114 (428)
T ss_dssp             TSBEECSSCCCCSSH-HHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEE
T ss_pred             CceeeeccccchhhH-HHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEc
Confidence            468999999999975 57888877421             12568766 68999999999986        778999999


Q ss_pred             CCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH-HHcCCEEEEecCC--CCCCCCHHHHHHHhhc-----CCCeEEEE
Q 014594          153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA-AVNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKCIFL  224 (422)
Q Consensus       153 ~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~-----~~~~~i~l  224 (422)
                      +|+++++..++++++++||+|+++.|+|+.+...+ ...|++++.++.+  ++|.+|++++++++++     .++++|++
T Consensus       115 ~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l  194 (428)
T 1iay_A          115 GGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLIL  194 (428)
T ss_dssp             EHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             cChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEE
Confidence            99999999999999999999999999999887644 3689999999965  4578999999998863     37899999


Q ss_pred             eCCCCccCcCCCHHHHHHHHc---C-CCeEEEccCCccccCCCc---h-hhhhhc-------CCcEEEEccChhhhcccc
Q 014594          225 TSPNNPDGSIINDEDLLKILE---M-PILVVLDEAYTEFSGLES---R-MEWVKK-------HDNLIVLRTFSKRAGLAG  289 (422)
Q Consensus       225 ~~p~NPtG~~~~~e~l~~i~~---~-~~~li~Deay~~~~~~~~---~-~~~~~~-------~~~~i~~~S~SK~~~~~G  289 (422)
                      ++||||||.+++.+++++|++   . |+++|+||+|.++.+++.   . ......       .++++++.||||.+|++|
T Consensus       195 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~G  274 (428)
T 1iay_A          195 TNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPG  274 (428)
T ss_dssp             ESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGG
T ss_pred             cCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCC
Confidence            999999999999666666554   4 999999999999765421   1 222222       588999999999999999


Q ss_pred             ccceeeec-CHHHHHHHHHhcCCCCCcHHHHHHHHHHccCCh----HHH-HHHHHHHHHHHHHHHHccCCCCcccC-CCc
Q 014594          290 LRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPI----YLE-VKEALIKERERLFKLLKDVPFLNPYP-SYS  362 (422)
Q Consensus       290 ~r~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~----~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p-~~~  362 (422)
                      +|+||+++ ++++++.+.+...+++.+.++|.++.++|++.+    +++ .+++++++++++.+.|++++ +.+.+ ..+
T Consensus       275 lr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g  353 (428)
T 1iay_A          275 FRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVG-IKCLKNNAG  353 (428)
T ss_dssp             GCEEEEEESCHHHHHHHHHHHTTSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCBCCCSSS
T ss_pred             ceEEEEEeCCHHHHHHHHHHHhcccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcccCCCee
Confidence            99999999 688999888877778899999999999999865    556 88889999999999999885 44444 478


Q ss_pred             eEEEEEeCCCC------CHHHHHHHHHhC-CcEEEeCCCCC--CCCeEEEEec--ChhhHHHHHHHHh
Q 014594          363 NFILCEVTSGM------DAKKLKDDLAKM-GVMIRHYNNKE--LKGYVRVSVG--KPEHTDALMECLM  419 (422)
Q Consensus       363 ~f~~~~~~~~~------~~~~~~~~L~~~-gI~v~~~~~~~--~~~~iRis~~--~~~~~~~l~~al~  419 (422)
                      +|+|++++...      +..++.+.|.++ ||.++++..+.  .++++||+++  +.++++++.++|+
T Consensus       354 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~  421 (428)
T 1iay_A          354 LFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIR  421 (428)
T ss_dssp             SEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHH
T ss_pred             EEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHHH
Confidence            99999997421      345788898865 99999977532  2579999998  4455555555544

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=100.00  E-value=1.9e-42  Score=340.97  Aligned_cols=324  Identities=22%  Similarity=0.316  Sum_probs=268.5

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-chHHHHHHHHHHcC------CCC-CCEEEeCCHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDSG------LES-DHILVGCGADELIDLIM  163 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y~~~-~~~~lr~~la~~~~------~~~-~~i~~~~G~~~al~~~~  163 (422)
                      .++|+|+.|++++++++.+.+++.+. .  ...+|+.. +..++|++++++++      +++ ++|++|+|+++++..++
T Consensus        23 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~  102 (410)
T 3e2y_A           23 PSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSI  102 (410)
T ss_dssp             TTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHH
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHH
Confidence            56899999999999999999998863 2  22578654 68999999999985      667 79999999999999999


Q ss_pred             HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-----------CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccC
Q 014594          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-----------SDFSLNVELIADAVEREKPKCIFLTSPNNPDG  232 (422)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-----------~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG  232 (422)
                      ++++++||+|+++.|+|..+...++..|++++.++.+           .++.+|+++++++++ +++++|++++|+||||
T Consensus       103 ~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~nptG  181 (410)
T 3e2y_A          103 QGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFS-SKTKAIILNTPHNPLG  181 (410)
T ss_dssp             HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCC-TTEEEEEEESSCTTTC
T ss_pred             HHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcC-CCceEEEEeCCCCCCC
Confidence            9999999999999999999999999999999999854           355689999999997 6899999999999999


Q ss_pred             cCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhh-hhhcCCcEEEEccChhhhccccccceeeecCHHHHHH
Q 014594          233 SIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY  304 (422)
Q Consensus       233 ~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~-~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~  304 (422)
                      .+++.+++++|++.    |+++|+||+|.+|.+++.   ... .....+++++++||||.+|++|+|+||+++++++++.
T Consensus       182 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~  261 (410)
T 3e2y_A          182 KVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIKH  261 (410)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCHHHHHH
T ss_pred             cCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECHHHHHH
Confidence            99998888888764    999999999999876442   122 2224578999999999999999999999999999998


Q ss_pred             HHHhcC--CCCCcHHHHHHHHHHccC--------ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC--
Q 014594          305 LWRAKQ--PYNVSVAAEVAACAALQN--------PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS--  371 (422)
Q Consensus       305 l~~~~~--~~~~~~~~~~aa~~~L~~--------~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~--  371 (422)
                      +.....  .++.+++.+.++.++|++        .++++ .+++++++++++.+.|+++++....|.+++|+|++++.  
T Consensus       262 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~  341 (410)
T 3e2y_A          262 LQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLG  341 (410)
T ss_dssp             HHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECGGGC
T ss_pred             HHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCccEEEEEEchhhh
Confidence            876644  578899999999998873        56777 88999999999999999986544678889999998853  


Q ss_pred             -CCC--------HHHHHHHHH-hCCcEEEeCCCCC-------CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          372 -GMD--------AKKLKDDLA-KMGVMIRHYNNKE-------LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       372 -~~~--------~~~~~~~L~-~~gI~v~~~~~~~-------~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                       +.+        ..++.+.|+ ++||.+.++..+.       ..+++||+++.+  .++|.+++++|
T Consensus       342 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~--~e~l~~~l~~l  406 (410)
T 3e2y_A          342 ADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIKK--DSTLDAAEEIF  406 (410)
T ss_dssp             CCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCCC--HHHHHHHHHHH
T ss_pred             cccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcCC--HHHHHHHHHHH
Confidence             121        347777665 7899999987642       358999999873  35577766655

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=100.00  E-value=1.1e-42  Score=343.97  Aligned_cols=324  Identities=19%  Similarity=0.306  Sum_probs=268.4

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhc-CCC---CCCCCCc-chHHHHHHHHHHcC------CCC-CCEEEeCCHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQ-LKF---PYIYPDP-ESRRLRAALAKDSG------LES-DHILVGCGADELIDLI  162 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~---~~~y~~~-~~~~lr~~la~~~~------~~~-~~i~~~~G~~~al~~~  162 (422)
                      .++|+|+.|++++++++.+.+++.+ +..   ...|+.. +..++|++++++++      +++ ++|++|+|++++++.+
T Consensus        28 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~  107 (422)
T 3fvs_A           28 HDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTA  107 (422)
T ss_dssp             SCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHH
T ss_pred             CCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHH
Confidence            4679999999999999999999876 322   2578654 78999999999875      666 6999999999999999


Q ss_pred             HHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC------------CCCCCHHHHHHHhhcCCCeEEEEeCCCCc
Q 014594          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS------------DFSLNVELIADAVEREKPKCIFLTSPNNP  230 (422)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~------------~~~~d~~~l~~~i~~~~~~~i~l~~p~NP  230 (422)
                      ++.++++||+|+++.|+|..+...++..|++++.++.+.            ++.+|+++++++++ +++++|++++||||
T Consensus       108 ~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~np  186 (422)
T 3fvs_A          108 FQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFT-SRTKALVLNTPNNP  186 (422)
T ss_dssp             HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCC-TTEEEEEEESSCTT
T ss_pred             HHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcC-CCceEEEECCCCCC
Confidence            999999999999999999999999999999999998653            45689999999997 68999999999999


Q ss_pred             cCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhh-hcCCcEEEEccChhhhccccccceeeecCHHHH
Q 014594          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII  302 (422)
Q Consensus       231 tG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~  302 (422)
                      ||.+++.+++++|++.    |+++|+||+|.+|.+++.   ..... ...+++++++|+||.+|++|+|+||++++++++
T Consensus       187 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~  266 (422)
T 3fvs_A          187 LGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIM  266 (422)
T ss_dssp             TCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHHHH
T ss_pred             CCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeCHHHH
Confidence            9999988877777664    999999999999876442   22222 235789999999999999999999999999999


Q ss_pred             HHHHHhcC--CCCCcHHHHHHHHHHccC--------ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC
Q 014594          303 EYLWRAKQ--PYNVSVAAEVAACAALQN--------PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS  371 (422)
Q Consensus       303 ~~l~~~~~--~~~~~~~~~~aa~~~L~~--------~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~  371 (422)
                      +.+.....  .++.+++.+.++.++|++        .++++ .+++++++++++.+.|++++.....|.+++|+|++++.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~  346 (422)
T 3fvs_A          267 KHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISD  346 (422)
T ss_dssp             HHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECHH
T ss_pred             HHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEEechh
Confidence            98876544  578899999999999873        46777 89999999999999999986444678889999998852


Q ss_pred             ---CCC----------HHHHHHHHH-hCCcEEEeCCCC-------CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          372 ---GMD----------AKKLKDDLA-KMGVMIRHYNNK-------ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       372 ---~~~----------~~~~~~~L~-~~gI~v~~~~~~-------~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                         ..+          ..++.+.|+ ++||.+.+|..+       ...+++||+++.+  .+++.+++++|
T Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~--~e~i~~~l~~l  415 (422)
T 3fvs_A          347 FKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKD--EATLQAMDEKL  415 (422)
T ss_dssp             HHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCCC--HHHHHHHHHHH
T ss_pred             hcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence               111          557787765 689999997753       3478999999873  35576666654

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=100.00  E-value=5e-43  Score=341.15  Aligned_cols=326  Identities=14%  Similarity=0.132  Sum_probs=269.1

Q ss_pred             HhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCCcchHHHHHHHHHHcC------CCCCCEEEeCCHHHHHH
Q 014594           89 QLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDPESRRLRAALAKDSG------LESDHILVGCGADELID  160 (422)
Q Consensus        89 ~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y~~~~~~~lr~~la~~~~------~~~~~i~~~~G~~~al~  160 (422)
                      .|+..++++|||+.|+++++++|++.+++.+ +.. ...|+..+ .++|++++++++      +++++|++|+|++++++
T Consensus        17 ~~d~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~   95 (377)
T 3fdb_A           17 KWTRYGQGVLPLWVAESDFSTCPAVLQAITDAVQREAFGYQPDG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLY   95 (377)
T ss_dssp             HHHSSCTTSEECCSSCCCSCCCHHHHHHHHHHHHTTCCSSCCSS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHH
T ss_pred             eeeccCCCeeeecccCCCCCCCHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHH
Confidence            3445678899999999999999999999876 332 36786555 889999999987      78899999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHH
Q 014594          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL  240 (422)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l  240 (422)
                      .++++++++||+|+++.|+|..+...++..|++++.++.+.+  +|++++++.++ .+++++++++|+||||.+++.+++
T Consensus        96 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~d~~~l~~~l~-~~~~~v~i~~p~nptG~~~~~~~l  172 (377)
T 3fdb_A           96 IAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG--INLHDVEKGFQ-AGARSILLCNPYNPLGMVFAPEWL  172 (377)
T ss_dssp             HHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS--CCHHHHHHHHH-TTCCEEEEESSBTTTTBCCCHHHH
T ss_pred             HHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC--CCHHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHH
Confidence            999999999999999999999999999999999999997665  99999999997 579999999999999999999999


Q ss_pred             HHHHcC----CCeEEEccCCccccCCC--c--hhhhhhcCCcEEEEccChhhhccccccceeeec-CHHHHHHHHHhcC-
Q 014594          241 LKILEM----PILVVLDEAYTEFSGLE--S--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ-  310 (422)
Q Consensus       241 ~~i~~~----~~~li~Deay~~~~~~~--~--~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~-  310 (422)
                      .+|++.    |+++|+||+|.++.+++  .  ....+...++++++.||||.+|++|+|+||+++ ++++++.+..... 
T Consensus       173 ~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~  252 (377)
T 3fdb_A          173 NELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSPV  252 (377)
T ss_dssp             HHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSCHH
T ss_pred             HHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHHHh
Confidence            888653    99999999999987654  1  222222367889999999999999999999887 7888888876543 


Q ss_pred             -CCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHcc-CCCCcc-cCCCceEEEEEeCCC-CCHHHHHHHHHh
Q 014594          311 -PYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKD-VPFLNP-YPSYSNFILCEVTSG-MDAKKLKDDLAK  384 (422)
Q Consensus       311 -~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~-~~~~~~-~p~~~~f~~~~~~~~-~~~~~~~~~L~~  384 (422)
                       .++.+++.+.++.++|++ .++++ .+++++++++++.+.|++ ++.+.+ .+.+++++|++++.. .+ .++.+.|++
T Consensus       253 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~  331 (377)
T 3fdb_A          253 IKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFRDTTIE-GSPSEFFIE  331 (377)
T ss_dssp             HHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECTTSCCC-SCHHHHHHH
T ss_pred             hcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEECcccCCC-HHHHHHHHH
Confidence             368899999999999887 46677 889999999999999988 655554 455566779999853 33 567777764


Q ss_pred             -CCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          385 -MGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       385 -~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                       +||.++++..+.  .++++||+++.++  +++.+++++|
T Consensus       332 ~~gi~v~~g~~~~~~~~~~~Ris~~~~~--e~i~~~l~~l  369 (377)
T 3fdb_A          332 KAKVAMNDGAWFGEDGTGFCRLNFATSR--EVLEEAIDRM  369 (377)
T ss_dssp             HHCEECEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred             hCCEEecCChhccCCCCCEEEEEeCCCH--HHHHHHHHHH
Confidence             599999987643  3689999999743  5566666654

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=100.00  E-value=1.7e-42  Score=341.25  Aligned_cols=332  Identities=24%  Similarity=0.349  Sum_probs=270.4

Q ss_pred             HHHHhCCCCCCeEEcCCCCC---CCCCCHHHHHHHhc-CCC-CCCCCCc-chHHHHHHHHHHc------CCCCCCEEEeC
Q 014594           86 LSIQLGRKPEDIVKIDANEN---PYGPPPEVREALGQ-LKF-PYIYPDP-ESRRLRAALAKDS------GLESDHILVGC  153 (422)
Q Consensus        86 ~~~~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~-~~~-~~~y~~~-~~~~lr~~la~~~------~~~~~~i~~~~  153 (422)
                      .+.+++..++++|+|+.+++   ++++++.+.+++.+ +.. ...|+.. +..++|+++++++      ++++++|++|+
T Consensus        29 ~~~~~~~~g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~  108 (406)
T 1xi9_A           29 PARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTA  108 (406)
T ss_dssp             CHHHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEES
T ss_pred             HHHHHHHcCCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcC
Confidence            44444445677899999999   78888999988865 322 2467654 6799999999997      46788999999


Q ss_pred             CHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCcc
Q 014594          154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPD  231 (422)
Q Consensus       154 G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt  231 (422)
                      |+++++..++++++++||+|+++.|+|+.+...++..|++++.++.+  +++.+|++++++.++ .++++|++++|+|||
T Consensus       109 g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~npt  187 (406)
T 1xi9_A          109 AVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKIT-DRTKAIAVINPNNPT  187 (406)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCC-TTEEEEEEESSCTTT
T ss_pred             ChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhC-cCceEEEEECCCCCC
Confidence            99999999999999999999999999999999999999999999864  356789999999997 589999999999999


Q ss_pred             CcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc--hhhhhhcCCc-EEEEccChhhhccccccceeee--cCH---
Q 014594          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLES--RMEWVKKHDN-LIVLRTFSKRAGLAGLRVGYGA--FPL---  299 (422)
Q Consensus       232 G~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~--~~~~~~~~~~-~i~~~S~SK~~~~~G~r~G~i~--~~~---  299 (422)
                      |.+++.+++++|++.    |+++|+||+|.++.+++.  ....++ .++ +++++||||.++++|+|+||++  +++   
T Consensus       188 G~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  266 (406)
T 1xi9_A          188 GALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLT-KDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKL  266 (406)
T ss_dssp             CCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHC-SSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTT
T ss_pred             CCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcC-CCceEEEEeccccccCCCccEEEEEEEecCchhH
Confidence            999997777776653    999999999999876322  233333 577 8999999999999999999999  898   


Q ss_pred             -HHHHHHHHhcCC-CCCcHHHHHHHHHHcc-CChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC--C
Q 014594          300 -SIIEYLWRAKQP-YNVSVAAEVAACAALQ-NPIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS--G  372 (422)
Q Consensus       300 -~~~~~l~~~~~~-~~~~~~~~~aa~~~L~-~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~--~  372 (422)
                       ++++.+...... ++.+.+.+.++.++|+ ..++++ .+++++++++++.+.|++++.+.+ .+.+++|+|++++.  +
T Consensus       267 ~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (406)
T 1xi9_A          267 SEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPW  346 (406)
T ss_dssp             HHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECSCSC
T ss_pred             HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecCCeeEEEEEecCccCC
Confidence             999888765433 7888899999999995 445667 889999999999999998854554 45567888888875  5


Q ss_pred             CCHHHHHHHHH-hCCcEEEeCCCCCC--CCeEEEEecChhhHHHHHHHHhhh
Q 014594          373 MDAKKLKDDLA-KMGVMIRHYNNKEL--KGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       373 ~~~~~~~~~L~-~~gI~v~~~~~~~~--~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .+..++.+.|. ++||.++++..++.  ++++||+++..+  +++.+++++|
T Consensus       347 ~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~~~~--~~i~~~~~~l  396 (406)
T 1xi9_A          347 KNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPI--EILEEAMDRF  396 (406)
T ss_dssp             SSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCH--HHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence            67889999987 89999998875433  689999998433  5566666654

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=100.00  E-value=7.2e-42  Score=335.72  Aligned_cols=331  Identities=15%  Similarity=0.231  Sum_probs=268.2

Q ss_pred             HHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCcchHHHHHHHHHHc----C--CCCCCEEEeCCHHHHH
Q 014594           88 IQLGRKPEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDPESRRLRAALAKDS----G--LESDHILVGCGADELI  159 (422)
Q Consensus        88 ~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~y~~~~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al  159 (422)
                      .++|..+.++++|+.+++++++++++.+++.+. . ....|+.. ..++|+++++++    |  +++++|++|+|+++++
T Consensus        24 ~~~g~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~  102 (399)
T 1c7n_A           24 SQNPEVGNEVVPLSVADMEFKNPPELIEGLKKYLDETVLGYTGP-TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAV  102 (399)
T ss_dssp             HHCTTCCTTCCCCCSSSCSSCCCHHHHHHHHHHHHHCCCSSBCC-CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHH
T ss_pred             hhccccCCCceeeeecCCCCCCCHHHHHHHHHHHhcCCCCCCCC-cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHH
Confidence            445543457899999999999999999998763 2 23567665 889999999985    6  6788999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-C--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-S--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (422)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (422)
                      ..++++++++||+|+++.|+|+.+...++..|++++.++.+ +  ++.+|++++++.++++++++|++++|+||||.+++
T Consensus       103 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~  182 (399)
T 1c7n_A          103 FNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWK  182 (399)
T ss_dssp             HHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCC
T ss_pred             HHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcC
Confidence            99999999999999999999999999999999999999864 2  24599999999997568999999999999999999


Q ss_pred             HHHHHHHHc---C-CCeEEEccCCccccCCCc---hhhhhhc--CCcEEEEccChhhhccccccceeeecC-HHHHHHHH
Q 014594          237 DEDLLKILE---M-PILVVLDEAYTEFSGLES---RMEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLW  306 (422)
Q Consensus       237 ~e~l~~i~~---~-~~~li~Deay~~~~~~~~---~~~~~~~--~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~  306 (422)
                      .+++++|++   . |+++|+||+|.+|.+++.   ....+..  .++++++.|+||.+|++|+|+||++++ +++++.+.
T Consensus       183 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~  262 (399)
T 1c7n_A          183 KDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFT  262 (399)
T ss_dssp             HHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHHHHH
Confidence            666666654   3 999999999999875432   2222222  478899999999999999999999996 67888887


Q ss_pred             HhcCCC---CCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHcc-CCCCccc-CCCceEEEEEeCC-CCCHHHH
Q 014594          307 RAKQPY---NVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKD-VPFLNPY-PSYSNFILCEVTS-GMDAKKL  378 (422)
Q Consensus       307 ~~~~~~---~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~-~~~~~~~-p~~~~f~~~~~~~-~~~~~~~  378 (422)
                      .....+   +.+++.+.++.++|++ .++++ .+++++++++++.+.|++ ++.+.+. +.+++++|+++++ +.+..++
T Consensus       263 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (399)
T 1c7n_A          263 KSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRALKMDHKAM  342 (399)
T ss_dssp             HHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGGCCCHHHH
T ss_pred             HHHhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEcccCCCCHHHH
Confidence            655443   6789999999888876 46777 888999999999999988 7555544 4455677899975 3678899


Q ss_pred             HHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          379 KDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       379 ~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .+.|. ++||.++++..+.  .++++||+++..+  +++.+++++|
T Consensus       343 ~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~--~~l~~~l~~l  386 (399)
T 1c7n_A          343 EEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPS--SVIQESLERL  386 (399)
T ss_dssp             HHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred             HHHHHHhCCEEEeCccccCCCCCCeEEEEeccCH--HHHHHHHHHH
Confidence            99997 7899999987533  4689999998763  4576666654

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=100.00  E-value=7.7e-42  Score=333.58  Aligned_cols=318  Identities=23%  Similarity=0.348  Sum_probs=263.9

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEE
Q 014594           96 DIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI  173 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~V  173 (422)
                      ++|+|+.|++++++++.+.+++.+ +.....|+.. +..++|+++++++++++++|++|+|+++++..++++++++||+|
T Consensus        26 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~V  105 (381)
T 1v2d_A           26 GAVNLGQGFPSNPPPPFLLEAVRRALGRQDQYAPPAGLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLVGPGDEV  105 (381)
T ss_dssp             TCEECCCCSCSSCCCHHHHHHHHHHTTTSCSCCCTTCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHCCTTCEE
T ss_pred             CeEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEE
Confidence            479999999999999999999886 3324568655 78999999999999988999999999999999999999999999


Q ss_pred             EEcCCCchhHHHHHHHcCCEEEEecCC---CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC----
Q 014594          174 VDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----  246 (422)
Q Consensus       174 l~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----  246 (422)
                      +++.|+|+.+...++..|++++.++.+   +++.+|++++++.++ +++++|++++|+||||.+++.+++++|++.    
T Consensus       106 l~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~  184 (381)
T 1v2d_A          106 VVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALT-PRTRALLLNTPMNPTGLVFGERELEAIARLARAH  184 (381)
T ss_dssp             EEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT
T ss_pred             EEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcC-cCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHc
Confidence            999999999999999999999999975   567899999999996 689999999999999999997777766653    


Q ss_pred             CCeEEEccCCccccCCC--chhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCCcHHHHHHH
Q 014594          247 PILVVLDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAA  322 (422)
Q Consensus       247 ~~~li~Deay~~~~~~~--~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~aa  322 (422)
                      |+++|+||+|.++.++.  ...... ..++++++.|+||.+|++|+|+||+++++++++.+.....  .++.+.+.+.++
T Consensus       185 ~~~li~De~~~~~~~g~~~~~~~~~-~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  263 (381)
T 1v2d_A          185 DLFLISDEVYDELYYGERPRRLREF-APERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGV  263 (381)
T ss_dssp             TCEEEEECTTTTCBSSSCCCCHHHH-CTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHHHHHTSSCCHHHHHHH
T ss_pred             CCEEEEEcCccccccCCCCCCHHHh-cCCCEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHHhhcccCCCcHHHHHH
Confidence            99999999999886522  122222 5678999999999999999999999999999888876543  578899999999


Q ss_pred             HHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCC--
Q 014594          323 CAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE--  396 (422)
Q Consensus       323 ~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~--  396 (422)
                      .++|+.   .++++ .+++++++++++.+.|++.++....+.+++|+|+++++. +   +.+.|.++||.++++..+.  
T Consensus       264 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-~---~~~~l~~~gi~v~~g~~~~~~  339 (381)
T 1v2d_A          264 AEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELPGW-D---AFRLVEEARVALIPASAFYLE  339 (381)
T ss_dssp             HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEECCSBSSEEEEECTTC-C---HHHHHHHTCEECEEGGGGCSS
T ss_pred             HHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHCCCEecCCCcceEEEEecChH-h---HHHHHHhCCEEEecchHhCCC
Confidence            888874   45677 889999999999999998764334455678999999743 3   6667779999999876532  


Q ss_pred             --CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          397 --LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       397 --~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                        .++++||+++..  .+++.+++++|
T Consensus       340 ~~~~~~iRi~~~~~--~~~i~~~~~~l  364 (381)
T 1v2d_A          340 DPPKDLFRFAFCKT--EEELHLALERL  364 (381)
T ss_dssp             SCCTTEEEEECCSC--HHHHHHHHHHH
T ss_pred             CCCCCEEEEEeCCC--HHHHHHHHHHH
Confidence              468999999872  35566666554

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=100.00  E-value=6e-42  Score=339.67  Aligned_cols=324  Identities=20%  Similarity=0.278  Sum_probs=267.2

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhc-CCC----CCCCCCc-chHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQ-LKF----PYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDL  161 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~----~~~y~~~-~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~~  161 (422)
                      .++|+|+.|.+++++++.+.+++.+ +..    ...|+.. +..++|+++++++    |  ++++ +|++|+|+++++..
T Consensus        37 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~  116 (429)
T 1yiz_A           37 YKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYA  116 (429)
T ss_dssp             HCCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHH
T ss_pred             CCEEEecCCCCCCCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHH
Confidence            3579999999999999999999876 322    2568654 7899999999996    6  5678 99999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC----------CCCCCHHHHHHHhhcCCCeEEEEeCCCCcc
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS----------DFSLNVELIADAVEREKPKCIFLTSPNNPD  231 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~----------~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt  231 (422)
                      ++++++++||+|+++.|+|+.+...++..|++++.++.+.          ++.+|++++++.++ +++++|++++|+|||
T Consensus       117 ~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~npt  195 (429)
T 1yiz_A          117 TIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFN-EKTKMIIINTPHNPL  195 (429)
T ss_dssp             HHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCC-TTEEEEEEESSCTTT
T ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhc-cCceEEEECCCCCCC
Confidence            9999999999999999999999999999999999999644          46799999999997 689999999999999


Q ss_pred             CcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHH
Q 014594          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (422)
Q Consensus       232 G~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~  303 (422)
                      |.+++.+++++|++.    |+++|+||+|.+|.+++.   ....+. ..++++++.|+||.+|++|+|+||+++++++++
T Consensus       196 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~  275 (429)
T 1yiz_A          196 GKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLK  275 (429)
T ss_dssp             CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCHHHHH
T ss_pred             CccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCHHHHH
Confidence            999997777776654    999999999999876432   222222 356899999999999999999999999999999


Q ss_pred             HHHHhc--CCCCCcHHHHHHHHHHccC--------ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCC
Q 014594          304 YLWRAK--QPYNVSVAAEVAACAALQN--------PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG  372 (422)
Q Consensus       304 ~l~~~~--~~~~~~~~~~~aa~~~L~~--------~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~  372 (422)
                      .+....  ..++.+++.+.++.++|++        .++++ .+++++++++++.+.|+++++....+.+++|+|+++++.
T Consensus       276 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~  355 (429)
T 1yiz_A          276 NLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSL  355 (429)
T ss_dssp             HHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHHTCEEEECSBSSEEEEECCSS
T ss_pred             HHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEEcccc
Confidence            887654  3588899999999999887        56777 889999999999999998764334566788999999753


Q ss_pred             ------------CCHHHHHHHHH-hCCcEEEeCCCCC-------CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          373 ------------MDAKKLKDDLA-KMGVMIRHYNNKE-------LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       373 ------------~~~~~~~~~L~-~~gI~v~~~~~~~-------~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                                  .+..++.+.|. ++||.++++..+.       .++++||+++..  .+++++++++|
T Consensus       356 ~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~--~e~i~~~l~~l  422 (429)
T 1yiz_A          356 DSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKK--DENLQKAAEIL  422 (429)
T ss_dssp             CTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCSC--HHHHHHHHHHH
T ss_pred             cccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence                        35678888887 8999999876432       268999999863  35566666654

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=100.00  E-value=1.7e-41  Score=331.76  Aligned_cols=329  Identities=21%  Similarity=0.269  Sum_probs=268.0

Q ss_pred             hCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCCcchHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHH
Q 014594           90 LGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDPESRRLRAALAKDS----G--LESDHILVGCGADELIDL  161 (422)
Q Consensus        90 ~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y~~~~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al~~  161 (422)
                      |...++++|+|+.++++++++|++.+++.+ +.. .+.|+.. ..++++++++++    |  +++++|++|+|+++++..
T Consensus        22 ~d~~g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~  100 (391)
T 3dzz_A           22 WGVLKEKELPMWIAEMDFKIAPEIMASMEEKLKVAAFGYESV-PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISA  100 (391)
T ss_dssp             TTTCCTTCEECCSSCCSSCCCHHHHHHHHHHHTTCCCCCBCC-CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHH
T ss_pred             eeccCCCceeccccCCCCCCCHHHHHHHHHHHhcCcCCCCCC-CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHH
Confidence            444567899999999999999999999986 332 3566544 466777776664    5  678899999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC---CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHH
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e  238 (422)
                      ++++++++||+|+++.|+|..+...++..|++++.++.+   .++.+|+++++++++++++++|++++|+||||.+++.+
T Consensus       101 ~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~  180 (391)
T 3dzz_A          101 MVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEE  180 (391)
T ss_dssp             HHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHH
T ss_pred             HHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHH
Confidence            999999999999999999999999999999999999963   33459999999999767899999999999999999998


Q ss_pred             HHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhc--CCcEEEEccChhhhccccccceeeecC-HHHHHHHHHh
Q 014594          239 DLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRA  308 (422)
Q Consensus       239 ~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~--~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~  308 (422)
                      ++++|++.    |+++|+||+|.++.+.+.   .......  .++++++.|+||.+|++|+|+||++++ +++++.+...
T Consensus       181 ~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~  260 (391)
T 3dzz_A          181 EVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEES  260 (391)
T ss_dssp             HHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHH
Confidence            88888664    999999999999876442   2222211  467899999999999999999999997 8898888765


Q ss_pred             c---CCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHcc-CCCCcc-cCCCceEEEEEeCC-CCCHHHHHH
Q 014594          309 K---QPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKD-VPFLNP-YPSYSNFILCEVTS-GMDAKKLKD  380 (422)
Q Consensus       309 ~---~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~-~~~~~~-~p~~~~f~~~~~~~-~~~~~~~~~  380 (422)
                      .   ..++.+++.+.++.++|++ .++++ .+++++++++++.+.|++ ++.+.+ .+.+++++|++++. +.+..++.+
T Consensus       261 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (391)
T 3dzz_A          261 FFLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISALGMNAEDFCK  340 (391)
T ss_dssp             HHHHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGGCSCHHHHHH
T ss_pred             HHhhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCceEEEEEehhhcCCCHHHHHH
Confidence            3   4578888999988888876 45677 889999999999999998 665654 45566778899975 468999999


Q ss_pred             HHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          381 DLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       381 ~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .|. ++||.++++..+.  .++++||+++.++  +++.+++++|
T Consensus       341 ~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~--~~i~~~l~~l  382 (391)
T 3dzz_A          341 YLREKTGLIISAGNGYRGNGHEFVRINLACPK--ELVIDGMQRL  382 (391)
T ss_dssp             HHHHHHCEECEESGGGCTTGGGEEEEECCSCH--HHHHHHHHHH
T ss_pred             HHHHhCCEEEeCchhhCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence            996 8999999987633  3589999999643  4566666554

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=100.00  E-value=1.2e-41  Score=334.01  Aligned_cols=323  Identities=14%  Similarity=0.175  Sum_probs=250.0

Q ss_pred             hHHHHHHhCC-CCCCeEEcCCCCC-----CCCCCHHHHHHHhcC----CCCCCC-CCcchHHHHHHHHHHc-C-----CC
Q 014594           83 FEVLSIQLGR-KPEDIVKIDANEN-----PYGPPPEVREALGQL----KFPYIY-PDPESRRLRAALAKDS-G-----LE  145 (422)
Q Consensus        83 ~~~~~~~~~~-~~~~~i~l~~~~~-----~~~~~~~v~~al~~~----~~~~~y-~~~~~~~lr~~la~~~-~-----~~  145 (422)
                      +..+..++.. ...++|+|+.|+.     ++.+++.+.++.. +    ...+.| |..|..+||+++++++ +     ++
T Consensus        16 i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~   94 (405)
T 3k7y_A           16 ILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIE   94 (405)
T ss_dssp             HHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHHHCSSCTTTT
T ss_pred             HHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHHcCCCCcccc
Confidence            3444444443 2357899999962     2456788888855 3    233678 5569999999999987 2     23


Q ss_pred             CCC--EEEeCCHHHHHHHHHHHhcC--CCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhc-CC
Q 014594          146 SDH--ILVGCGADELIDLIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER-EK  218 (422)
Q Consensus       146 ~~~--i~~~~G~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~-~~  218 (422)
                      +++  +++|+|+++++.+++..+++  + |+|++++|+|+.|...++..|++++.+|.  ++++++|++.+++.+++ .+
T Consensus        95 ~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~  173 (405)
T 3k7y_A           95 DKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPN  173 (405)
T ss_dssp             TTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCS
T ss_pred             ccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCC
Confidence            454  59999999999999998887  8 99999999999999999999999999996  34589999999999974 45


Q ss_pred             CeEEEEeCC-CCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc-----hh-hhhhcCCcEEEEccChhhhcc
Q 014594          219 PKCIFLTSP-NNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-----RM-EWVKKHDNLIVLRTFSKRAGL  287 (422)
Q Consensus       219 ~~~i~l~~p-~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~-----~~-~~~~~~~~~i~~~S~SK~~~~  287 (422)
                      ++++++++| |||||.+++.+++++|++.    ++++|+||+|.+|.+++.     .. ......+++++++||||.|++
T Consensus       174 ~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l  253 (405)
T 3k7y_A          174 GSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSL  253 (405)
T ss_dssp             SCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCC
T ss_pred             CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCC
Confidence            688888754 8999999999999998875    999999999999986421     12 222346799999999999999


Q ss_pred             ccccceeeec---CHHHHHHHH----Hh-cCCC-CCcHHHHHHHHHHccCC----hHHH----HHHHHHHHHHHHHHHHc
Q 014594          288 AGLRVGYGAF---PLSIIEYLW----RA-KQPY-NVSVAAEVAACAALQNP----IYLE----VKEALIKERERLFKLLK  350 (422)
Q Consensus       288 ~G~r~G~i~~---~~~~~~~l~----~~-~~~~-~~~~~~~~aa~~~L~~~----~~~~----~~~~~~~~~~~l~~~L~  350 (422)
                      +|+|+||+++   ++++++.+.    .. +..+ +.+.++|.++..+|+++    .|.+    ++++++++|+.+.+.|+
T Consensus       254 ~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~  333 (405)
T 3k7y_A          254 YGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLE  333 (405)
T ss_dssp             TTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999864   677665543    22 2334 56788999999999874    3433    66779999999999999


Q ss_pred             ----cCCC----CcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC--hhhHHHHHHHHhh
Q 014594          351 ----DVPF----LNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK--PEHTDALMECLMH  420 (422)
Q Consensus       351 ----~~~~----~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~--~~~~~~l~~al~~  420 (422)
                          +++.    ....|.+|+|+|+.++.     ++++.|.++||.+.|+.        |||++.  +++++++.++|++
T Consensus       334 ~~~~~~g~~~~~~~~~p~gg~f~~~~l~~-----~~~~~L~~~gV~v~p~~--------Ris~a~~~~~~i~~~~~~i~~  400 (405)
T 3k7y_A          334 TYQKKYNLNYDWNVYKKQRGLFSFVPLLA-----KIAEHLKTHHIYIINNG--------RINVSGITKNNVDYIADKICL  400 (405)
T ss_dssp             HHGGGGTCCCCGGGGSSCCSSEEECGGGG-----GGTTTTTTTTEECCTTS--------EEEGGGCCTTHHHHHHHHHHH
T ss_pred             hhhhhcCCCCCCccccCCceEEEecCCCH-----HHHHHHHHCCEeecCCC--------eEEEeccCHHHHHHHHHHHHH
Confidence                8752    23467888999988752     34566678899999864        999973  5566777777664

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=100.00  E-value=9.8e-42  Score=334.74  Aligned_cols=324  Identities=21%  Similarity=0.316  Sum_probs=262.2

Q ss_pred             CCeEEcCCCCCCC--CCCHHHHHHHhcC-CC----CCCCCC-cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 014594           95 EDIVKIDANENPY--GPPPEVREALGQL-KF----PYIYPD-PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (422)
Q Consensus        95 ~~~i~l~~~~~~~--~~~~~v~~al~~~-~~----~~~y~~-~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l  166 (422)
                      +++|+|+.+.+..  .+++++.+++.+. ..    ...|+. .+..++|+++++++|+++++|++|+|+++++..+++++
T Consensus        32 ~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~  111 (397)
T 2zyj_A           32 PGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVF  111 (397)
T ss_dssp             TTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHH
T ss_pred             CCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHh
Confidence            4679999886543  2567888887652 21    256754 47899999999999988899999999999999999999


Q ss_pred             cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEE-EeCCCCccCcCCCHHHHHHHHc
Q 014594          167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF-LTSPNNPDGSIINDEDLLKILE  245 (422)
Q Consensus       167 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~-l~~p~NPtG~~~~~e~l~~i~~  245 (422)
                      +++||+|+++.|+|+.+...++..|++++.++.+++ ++|++++++.+++.++++|+ +++|+||||.+++.+++++|++
T Consensus       112 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~  190 (397)
T 2zyj_A          112 LDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE-GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQ  190 (397)
T ss_dssp             CCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-EECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC-CCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHH
Confidence            999999999999999999999999999999986544 58999999999755789885 5799999999999997776665


Q ss_pred             C----CCeEEEccCCccccCCCc---hhhhhhcC---CcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--CC
Q 014594          246 M----PILVVLDEAYTEFSGLES---RMEWVKKH---DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN  313 (422)
Q Consensus       246 ~----~~~li~Deay~~~~~~~~---~~~~~~~~---~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~~  313 (422)
                      .    |+++|+||+|.++.+++.   ....++..   +++++++|+||.++ +|+|+||+++++++++.+......  ++
T Consensus       191 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~l~~~~~~~~~~  269 (397)
T 2zyj_A          191 MVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEALQKLVQAKQGADLH  269 (397)
T ss_dssp             HHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEECCHHHHHHHHHHHHHHHSS
T ss_pred             HHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEeccccccc-ccceeEEEecCHHHHHHHHHHHHhhcCC
Confidence            3    999999999999875432   22233333   78899999999999 999999999999999988765443  56


Q ss_pred             CcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHcc-CC-CCc-ccCCCceEEEEEeCCCCCHHHHHHHHHhCCc
Q 014594          314 VSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKD-VP-FLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGV  387 (422)
Q Consensus       314 ~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~-~~-~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI  387 (422)
                      .+++.+.++.++|++.  ++++ .+++++++++++.+.|++ ++ ++. ..|.+++|+|++++.+.+..++.+.|.++||
T Consensus       270 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi  349 (397)
T 2zyj_A          270 TPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKGLSAEGLFRRALEENV  349 (397)
T ss_dssp             CCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSBSSEEEEECSTTCCHHHHHHHHHHTTE
T ss_pred             CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCccEEEEEEcCCCCCHHHHHHHHHHCCC
Confidence            7999999999999987  4566 888899999999999987 44 344 3577889999999877788999999998899


Q ss_pred             EEEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          388 MIRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       388 ~v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .++++..+    ..++++||+++.. +.+++++++++|
T Consensus       350 ~v~~g~~f~~~~~~~~~iRis~~~~-~~~~i~~~~~~l  386 (397)
T 2zyj_A          350 AFVPGGPFFANGGGENTLRLSYATL-DREGIAEGVRRL  386 (397)
T ss_dssp             EEEESGGGCTTSCCTTEEEEECSSS-CHHHHHHHHHHH
T ss_pred             EEechHHhcCCCCCCCeEEEEcCCC-CHHHHHHHHHHH
Confidence            99987653    2468999999864 224455554443

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=100.00  E-value=8.2e-42  Score=338.12  Aligned_cols=321  Identities=16%  Similarity=0.167  Sum_probs=256.0

Q ss_pred             CeEEcCCCCCC---CCCCHHHHHHHhcC----C--CCCCCCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHH--HHHH
Q 014594           96 DIVKIDANENP---YGPPPEVREALGQL----K--FPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELI--DLIM  163 (422)
Q Consensus        96 ~~i~l~~~~~~---~~~~~~v~~al~~~----~--~~~~y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al--~~~~  163 (422)
                      .+|+|+.|+++   +++++.+.+++.+.    .  ...+|+++ |..+||+++++++++++++|++|+|+++++  .+++
T Consensus        33 ~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~i~~t~G~~~al~l~~~~  112 (422)
T 3d6k_A           33 LSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEALGLPADLVVAQDGSSLNIMFDLIS  112 (422)
T ss_dssp             CCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHHTCCGGGEEECSSCHHHHHHHHHH
T ss_pred             CeEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHhCCChhHEEEecchHHHHHHHHHH
Confidence            37999999998   88888888877642    1  13578765 699999999999999999999999999997  7777


Q ss_pred             HHhcCC------------CCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEE-EeCCCCc
Q 014594          164 RCVLDP------------GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF-LTSPNNP  230 (422)
Q Consensus       164 ~~l~~~------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~-l~~p~NP  230 (422)
                      +.+..+            +|+|+++.|+|..|...++..|++++.++.+++ ++|++++++.+++.++++|+ +++||||
T Consensus       113 ~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~l~~~l~~~~~~~v~~~~~~~NP  191 (422)
T 3d6k_A          113 WSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE-GPDMGVVRELVKDPQVKGMWTVPVFGNP  191 (422)
T ss_dssp             HHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT-EECHHHHHHHHTSTTEEEEEECCSSCTT
T ss_pred             HHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCC-CCCHHHHHHHHhcCCCeEEEEcCCCCCC
Confidence            877765            347999999999999999999999999997554 59999999999745789988 5799999


Q ss_pred             cCcCCCHHHHHHHHc----C-CCeEEEccCCcc--ccCCCc---hh-hh---hhcCCcEEEEccChhhhccccccceeee
Q 014594          231 DGSIINDEDLLKILE----M-PILVVLDEAYTE--FSGLES---RM-EW---VKKHDNLIVLRTFSKRAGLAGLRVGYGA  296 (422)
Q Consensus       231 tG~~~~~e~l~~i~~----~-~~~li~Deay~~--~~~~~~---~~-~~---~~~~~~~i~~~S~SK~~~~~G~r~G~i~  296 (422)
                      ||.+++.+++++|++    . |+++|+||+|.+  |.+++.   .. ..   .+..+++++++||||. +++|+|+||++
T Consensus       192 tG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~  270 (422)
T 3d6k_A          192 TGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAGSGVSFFA  270 (422)
T ss_dssp             TCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTTSSCEEEE
T ss_pred             CCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcccceEEEE
Confidence            999999997776654    4 899999999985  544321   22 11   2356889999999998 77999999999


Q ss_pred             cCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccC-C---hHHH-HHHHHHHHHHHHHHHHcc----CCCCc-ccCCCceE
Q 014594          297 FPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN-P---IYLE-VKEALIKERERLFKLLKD----VPFLN-PYPSYSNF  364 (422)
Q Consensus       297 ~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~-~---~~~~-~~~~~~~~~~~l~~~L~~----~~~~~-~~p~~~~f  364 (422)
                      +++++++.+......  ++.+.++|.++.++|++ +   ++++ .++.++++++.+.+.|++    ++.+. ..|++++|
T Consensus       271 ~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~  350 (422)
T 3d6k_A          271 SSKENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYF  350 (422)
T ss_dssp             CCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSC
T ss_pred             eCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceE
Confidence            999999988876543  67899999999999998 3   4555 778888888888887764    44344 46778999


Q ss_pred             EEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-C-----CCCCeEEEEec--ChhhHHHHHHHHh
Q 014594          365 ILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-K-----ELKGYVRVSVG--KPEHTDALMECLM  419 (422)
Q Consensus       365 ~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~-~-----~~~~~iRis~~--~~~~~~~l~~al~  419 (422)
                      +|++++.. +.+.+.+.|.++||.+++++. +     ..++++|||++  +.++++++.++|+
T Consensus       351 ~~~~~~~~-~~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~  412 (422)
T 3d6k_A          351 ISVDVVPG-TASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMDGFA  412 (422)
T ss_dssp             EEEEESTT-CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHH
T ss_pred             EEEECCCC-CHHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHHHHHHHHH
Confidence            99999854 678888888899999999433 3     24689999998  4444444444443

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=2.8e-41  Score=332.87  Aligned_cols=346  Identities=20%  Similarity=0.284  Sum_probs=272.4

Q ss_pred             HHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCCc-chHHHHHHHHHHcC--
Q 014594           69 SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDP-ESRRLRAALAKDSG--  143 (422)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y~~~-~~~~lr~~la~~~~--  143 (422)
                      +.+....++ +...+.....+....++++|+|+.+++++++++.+.+++ + +.. ...|+.. +..++|++++++++  
T Consensus        18 ~~~~~~~~~-~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~~   95 (409)
T 2gb3_A           18 DRVLLTEES-PIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERI-YENKPEVVYYSHSAGIWELREAFASYYKRR   95 (409)
T ss_dssp             HHHHSCCCC-TTGGGHHHHHHHHHTTCEEEECSSCCCCSCCCTHHHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHHT
T ss_pred             HHhhcCCcc-HHHHHHHHHHHHHhcCCCEEeccCCCCCCCCCHHHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHHH
Confidence            334444443 232333333333334567899999999988889999999 6 432 2467654 68999999999973  


Q ss_pred             ----CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcC
Q 014594          144 ----LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVERE  217 (422)
Q Consensus       144 ----~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~  217 (422)
                          +++++|++|+|+++++..++++++++||+|+++.|+|+.+...++..|++++.++.++  ++.+ +++|++.++ .
T Consensus        96 ~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~-~  173 (409)
T 2gb3_A           96 QRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFIN-E  173 (409)
T ss_dssp             SCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCC-T
T ss_pred             hCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhC-c
Confidence                5678999999999999999999999999999999999999999999999999999753  4555 889999887 5


Q ss_pred             CCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCchhhhhh-cCCcEEEEccChhhhccccccc
Q 014594          218 KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVK-KHDNLIVLRTFSKRAGLAGLRV  292 (422)
Q Consensus       218 ~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~r~  292 (422)
                      ++++|++++|+||||.+++.+++++|++.    |+++|+||+|.++.+++.....+. ..+++++++||||.+|++|+|+
T Consensus       174 ~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~  253 (409)
T 2gb3_A          174 RTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARV  253 (409)
T ss_dssp             TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCC
T ss_pred             CCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCccceE
Confidence            89999999999999999998777777653    999999999999876432222222 2467999999999999999999


Q ss_pred             eeeecCH-HHHHHHHHhcCCC-CCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEE
Q 014594          293 GYGAFPL-SIIEYLWRAKQPY-NVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILC  367 (422)
Q Consensus       293 G~i~~~~-~~~~~l~~~~~~~-~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~  367 (422)
                      ||+++++ ++++.+......+ +.+++.+.++.++|+. .++++ .+++++++++++.+.|+++++.. ..|.+++|+|+
T Consensus       254 G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~  333 (409)
T 2gb3_A          254 GCLITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITA  333 (409)
T ss_dssp             EEEECSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSBSSEEEE
T ss_pred             EEEEECcHHHHHHHHHHHhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHcCceeeeCCCeeEEEEE
Confidence            9999998 9998887665555 8899999999999975 45666 88899999999999999885433 35667889999


Q ss_pred             EeCCCCCHHHHHHHHHhC------CcEEEeCCCC-----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          368 EVTSGMDAKKLKDDLAKM------GVMIRHYNNK-----ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       368 ~~~~~~~~~~~~~~L~~~------gI~v~~~~~~-----~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +++ +.+..++.+.|.++      ||.++++..+     ..++++||+++..+  +++.+++++|
T Consensus       334 ~~~-~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~~~~--e~i~~~~~~l  395 (409)
T 2gb3_A          334 ELP-VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEK--DLLSRAIDVL  395 (409)
T ss_dssp             ECS-SSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCH--HHHHHHHHHH
T ss_pred             EeC-CCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeCCCH--HHHHHHHHHH
Confidence            997 66889999999876      9999987653     23689999998433  4455555443

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=100.00  E-value=5.4e-42  Score=342.06  Aligned_cols=319  Identities=17%  Similarity=0.241  Sum_probs=257.5

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhc-CC------CCCCCCC-cchHHHHHHHHHHc----CCCCCCEEEeCCHHHHHH
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQ-LK------FPYIYPD-PESRRLRAALAKDS----GLESDHILVGCGADELID  160 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~------~~~~y~~-~~~~~lr~~la~~~----~~~~~~i~~~~G~~~al~  160 (422)
                      ++.++|+|+.|+++++++|.+.+++.+ +.      ....|+. .+..+||+++++++    ++++++|++|+|+++++.
T Consensus        67 ~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~  146 (449)
T 3qgu_A           67 PDAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDIA  146 (449)
T ss_dssp             TTCCCEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHH
T ss_pred             CCCCEEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHH
Confidence            456799999999999999999988865 22      2256744 57899999999998    788899999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCE----------EEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCC
Q 014594          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA----------VVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPN  228 (422)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~----------~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~  228 (422)
                      .+ ..++++||+|+++.|+|..+...++..|++          ++.++.++  ++..|++++      +++++|++++||
T Consensus       147 ~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~l~~p~  219 (449)
T 3qgu_A          147 RI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA------KRTDIIFFCSPN  219 (449)
T ss_dssp             HH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC------CCCSEEEEESSC
T ss_pred             HH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc------CCCCEEEEeCCC
Confidence            99 778999999999999999999999999998          99988643  344554321      578999999999


Q ss_pred             CccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecCHH
Q 014594          229 NPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (422)
Q Consensus       229 NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~  300 (422)
                      ||||.+++.+++++|++.    |+++|+||+|.+|.+++.   .+..+. ..++++++.||||.+|++|+|+||++++++
T Consensus       220 NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~  299 (449)
T 3qgu_A          220 NPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKA  299 (449)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTT
T ss_pred             CCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHH
Confidence            999999999998888764    999999999999886542   222222 257789999999999999999999999888


Q ss_pred             HHH--------HHHHh--cCCCCCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEE
Q 014594          301 IIE--------YLWRA--KQPYNVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILC  367 (422)
Q Consensus       301 ~~~--------~l~~~--~~~~~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~  367 (422)
                      +++        .+...  ...++.+++++.++.++|++.  ++++ ++++++++++++.+.|+++++....+.+++|+|+
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~  379 (449)
T 3qgu_A          300 LKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEMGFSVYGGDDAPYIWV  379 (449)
T ss_dssp             CBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEESSSSSEEEE
T ss_pred             HHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCeeEEEE
Confidence            764        33322  233578999999999999872  5666 8899999999999999998754445667999999


Q ss_pred             EeCCCCCHHHHHHHHHh-CCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          368 EVTSGMDAKKLKDDLAK-MGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       368 ~~~~~~~~~~~~~~L~~-~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +++ +.+..++++.|++ +||.++++..+  ..++++||++...+  +++++++++|
T Consensus       380 ~~~-~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~~~--e~i~~~l~~l  433 (449)
T 3qgu_A          380 GFP-GKPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFGSR--ENILEAVRRF  433 (449)
T ss_dssp             ECT-TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred             ECC-CCCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecCCH--HHHHHHHHHH
Confidence            998 7788999988885 59999998763  34689999986532  4455555544

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=100.00  E-value=2.6e-41  Score=333.64  Aligned_cols=324  Identities=17%  Similarity=0.215  Sum_probs=262.5

Q ss_pred             CCeEEcCCCCC----CCCCCHHHHHHHhc-CC--CCCCCCC-cchHHHHHHHHHHcC------------CCCCCEEEeCC
Q 014594           95 EDIVKIDANEN----PYGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDSG------------LESDHILVGCG  154 (422)
Q Consensus        95 ~~~i~l~~~~~----~~~~~~~v~~al~~-~~--~~~~y~~-~~~~~lr~~la~~~~------------~~~~~i~~~~G  154 (422)
                      .++|+|+.+.+    .+++++.+.+++.+ +.  ....|+. .+..++|++++++++            +++++|++|+|
T Consensus        33 ~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g  112 (416)
T 1bw0_A           33 KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSG  112 (416)
T ss_dssp             SCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESH
T ss_pred             CCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCC
Confidence            56899999975    57889999998876 22  2256854 478999999999998            77899999999


Q ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccC
Q 014594          155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDG  232 (422)
Q Consensus       155 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG  232 (422)
                      +++++..++++++++||+|+++.|+|+.+...++..|++++.++.+.  ++.+|++++++.++ .+++++++++|+||||
T Consensus       113 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~nptG  191 (416)
T 1bw0_A          113 GSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKD-DKTKLLIVTNPSNPCG  191 (416)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCC-TTEEEEEEESSCTTTC
T ss_pred             hHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhc-cCCeEEEEeCCCCCCC
Confidence            99999999999999999999999999999999999999999998543  46799999999997 6789999999999999


Q ss_pred             cCCCHHHHHHHHc---C-CCeEEEccCCccccCCCc-------hhhhhhcCCcEEEEccChhhhccccccceeeecCHH-
Q 014594          233 SIINDEDLLKILE---M-PILVVLDEAYTEFSGLES-------RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-  300 (422)
Q Consensus       233 ~~~~~e~l~~i~~---~-~~~li~Deay~~~~~~~~-------~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~-  300 (422)
                      .+++.+++++|++   . |+++|+||+|.++.+++.       ....+...+++++++||||.|+++|+|+||++++++ 
T Consensus       192 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~  271 (416)
T 1bw0_A          192 SNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPH  271 (416)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTT
T ss_pred             cccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCch
Confidence            9999766666655   3 999999999999875432       122223345689999999999999999999998653 


Q ss_pred             -----HHHHHHHhc-CCCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeC
Q 014594          301 -----IIEYLWRAK-QPYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVT  370 (422)
Q Consensus       301 -----~~~~l~~~~-~~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~  370 (422)
                           +...+.... ..++.+++.|.++.++|+.  .++++ .+++++++++++.+.|++++.+.+ .|.+++|+|++++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~  351 (416)
T 1bw0_A          272 GNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRID  351 (416)
T ss_dssp             CSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEEEC
T ss_pred             hhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCC
Confidence                 333333322 3578899999999999985  46777 888999999999999998854544 4667899999986


Q ss_pred             C-----CCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          371 S-----GMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       371 ~-----~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .     ..+..++.+.|+ ++||.++++..+..++++||+++.++  +++.+++++|
T Consensus       352 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~~~~--e~l~~~l~~l  406 (416)
T 1bw0_A          352 LEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPV--EVYREAVERI  406 (416)
T ss_dssp             GGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCH--HHHHHHHHHH
T ss_pred             HHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEecCCH--HHHHHHHHHH
Confidence            3     257888988885 89999999877666789999997543  4577777665

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=100.00  E-value=2.2e-41  Score=335.83  Aligned_cols=320  Identities=17%  Similarity=0.186  Sum_probs=261.7

Q ss_pred             CCeEEcCCCCC-CCCCCHHH--HHHHhc-CC--CCCCCCCc-chHHHHHHHHHHc-----CCCCCC---EEEeCCHHHHH
Q 014594           95 EDIVKIDANEN-PYGPPPEV--REALGQ-LK--FPYIYPDP-ESRRLRAALAKDS-----GLESDH---ILVGCGADELI  159 (422)
Q Consensus        95 ~~~i~l~~~~~-~~~~~~~v--~~al~~-~~--~~~~y~~~-~~~~lr~~la~~~-----~~~~~~---i~~~~G~~~al  159 (422)
                      +++|+|+.|++ +++.+|.+  .+++.+ +.  ....|++. |..++|+++++++     ++++++   |++|+|+++++
T Consensus        47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~al  126 (430)
T 2x5f_A           47 STTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGL  126 (430)
T ss_dssp             TCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHHH
T ss_pred             CCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcCCchHHH
Confidence            56899999999 88877766  777665 32  23678665 7899999999999     888889   99999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCchhHHHHHHH-cCCEEEEecCCC-CCCCCHHHHHHHhhcC--CCeEEEEeCCCCccCcCC
Q 014594          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVPRKS-DFSLNVELIADAVERE--KPKCIFLTSPNNPDGSII  235 (422)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~v~~~~-~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~~~  235 (422)
                      +.++++++++||+|+++.|+|+.+...++. .|++++.++.++ ++.+|++++++.+++.  +++++++++||||||.++
T Consensus       127 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~  206 (430)
T 2x5f_A          127 SLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTP  206 (430)
T ss_dssp             HHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCC
T ss_pred             HHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcC
Confidence            999999999999999999999999999998 999999999654 4689999999999742  789999999999999999


Q ss_pred             CHHHHHHHHc---------CCCeEEEccCCccccCCCc---hhh-hhhc-CCc---EEEEccChhhhccccccceeeec-
Q 014594          236 NDEDLLKILE---------MPILVVLDEAYTEFSGLES---RME-WVKK-HDN---LIVLRTFSKRAGLAGLRVGYGAF-  297 (422)
Q Consensus       236 ~~e~l~~i~~---------~~~~li~Deay~~~~~~~~---~~~-~~~~-~~~---~i~~~S~SK~~~~~G~r~G~i~~-  297 (422)
                      +.+++++|++         .|+++|+||+|.+|.+++.   ... .+.. .++   +++++||||.+|++|+|+||+++ 
T Consensus       207 ~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~  286 (430)
T 2x5f_A          207 THKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFG  286 (430)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEB
T ss_pred             CHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEe
Confidence            9766666553         5899999999999876432   222 3333 677   99999999999999999999999 


Q ss_pred             --CHHHHHHHHHhc------CCCCCcHHHHHHHHHHcc-CChHHH----HHHHHHHHHHHHHHHHc----cCCCCcccCC
Q 014594          298 --PLSIIEYLWRAK------QPYNVSVAAEVAACAALQ-NPIYLE----VKEALIKERERLFKLLK----DVPFLNPYPS  360 (422)
Q Consensus       298 --~~~~~~~l~~~~------~~~~~~~~~~~aa~~~L~-~~~~~~----~~~~~~~~~~~l~~~L~----~~~~~~~~p~  360 (422)
                        ++++++.+....      ..++.+++.|.++.++|+ +.+|.+    .+++++++++.+.+.|+    ++++....+.
T Consensus       287 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~  366 (430)
T 2x5f_A          287 TSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQAYDFN  366 (430)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTTEEECCCC
T ss_pred             cCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCceeeCCC
Confidence              999999887654      347899999999999998 765544    67788999999999998    5543223455


Q ss_pred             CceEEEEEeCCCCCHHHHHHHHHh-CCcEEEeCCCCCCCCeEEEEec-Ch-hhHHHHHHHHh
Q 014594          361 YSNFILCEVTSGMDAKKLKDDLAK-MGVMIRHYNNKELKGYVRVSVG-KP-EHTDALMECLM  419 (422)
Q Consensus       361 ~~~f~~~~~~~~~~~~~~~~~L~~-~gI~v~~~~~~~~~~~iRis~~-~~-~~~~~l~~al~  419 (422)
                      +++|+|++++ +.+..++.+.|.+ +||.++++    .++++||+++ .+ ++++++.++|+
T Consensus       367 ~g~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g----~~~~iRis~~~~~~e~i~~~~~~l~  423 (430)
T 2x5f_A          367 SGYFMAIKVH-DVDPEALRKHLIDKYSIGVIAL----NATDIRIAFSCVEKDDIPHVFDSIA  423 (430)
T ss_dssp             BSSEEEEEES-SSCHHHHHHHHHHHHCEECEEC----SSSEEEEEGGGSCGGGHHHHHHHHH
T ss_pred             ceEEEEeCCC-CCCHHHHHHHHHHhCCEEEecC----CCCeEEEEEecCCHHHHHHHHHHHH
Confidence            6788999998 7788999999996 99999997    3589999998 43 33454444443

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=100.00  E-value=3.7e-41  Score=333.72  Aligned_cols=346  Identities=18%  Similarity=0.267  Sum_probs=262.0

Q ss_pred             HHHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHH--H-------------HHHHhcCCCCCCCC-Cc
Q 014594           66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPE--V-------------REALGQLKFPYIYP-DP  129 (422)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~--v-------------~~al~~~~~~~~y~-~~  129 (422)
                      ++++.+..+.++ ++..+...+.+.   +.++|+|+.|.++...+|.  .             .++...   ...|+ ..
T Consensus         6 ~~s~~~~~~~~~-~~~~~~~~~~~~---~~~~i~l~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~~~~   78 (425)
T 2r2n_A            6 FITAASAARNPS-PIRTMTDILSRG---PKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMKR---ALQYSPSA   78 (425)
T ss_dssp             GSCHHHHTCCCC-SGGGHHHHHHHS---CTTCEECCCCCCCGGGCSEEEEEEEETTSCCEEECHHHHHH---HTSCCCTT
T ss_pred             HHHHHHhcCCCc-hHHHHHHHhhcC---CCCeEEcCCcCCCchhCCHHHHHHHHhhcccccccccchhh---hcCCCCCC
Confidence            445555555554 233333333322   2467999999887644331  0             011111   13564 45


Q ss_pred             chHHHHHHHHHHc----CCCC---------CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEE
Q 014594          130 ESRRLRAALAKDS----GLES---------DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK  196 (422)
Q Consensus       130 ~~~~lr~~la~~~----~~~~---------~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~  196 (422)
                      |+.+||+++++++    |++.         ++|++|+|+++++..++++++++||+|+++.|+|..+...++..|++++.
T Consensus        79 G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~  158 (425)
T 2r2n_A           79 GIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIIN  158 (425)
T ss_dssp             CCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTCEEEE
T ss_pred             CCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEE
Confidence            8899999999885    6643         69999999999999999999999999999999999999999999999999


Q ss_pred             ecCCCCCCCCHHHHHHHhhc-----------CCCeEEEE-eCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCcccc
Q 014594          197 VPRKSDFSLNVELIADAVER-----------EKPKCIFL-TSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFS  260 (422)
Q Consensus       197 v~~~~~~~~d~~~l~~~i~~-----------~~~~~i~l-~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~  260 (422)
                      ++.+++ ++|+++|++.+++           .++++|++ ++||||||.+++.+++++|++.    |+++|+||+|.++.
T Consensus       159 v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~  237 (425)
T 2r2n_A          159 VASDES-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQ  237 (425)
T ss_dssp             ECEETT-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGB
T ss_pred             eCcCCC-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCccccc
Confidence            997543 6999999999862           36888887 5999999999999977776653    99999999999887


Q ss_pred             CCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHccC------C
Q 014594          261 GLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN------P  329 (422)
Q Consensus       261 ~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~------~  329 (422)
                      +++.   .+..++..+++++++||||.++ +|+|+||+++++++++.+.....  .++.+.+.|.++.++|++      .
T Consensus       238 ~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~  316 (425)
T 2r2n_A          238 FNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFM  316 (425)
T ss_dssp             SSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEHHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccchHH
Confidence            5432   2233344578999999999998 99999999999999998876543  478899999999999986      2


Q ss_pred             hHHH-HHHHHHHHHHHHHHHHcc-CCCC-c-ccCCCceEEEEEeCCCCCHHH-HHHHHHhCCcEEEeCCCCC-----CCC
Q 014594          330 IYLE-VKEALIKERERLFKLLKD-VPFL-N-PYPSYSNFILCEVTSGMDAKK-LKDDLAKMGVMIRHYNNKE-----LKG  399 (422)
Q Consensus       330 ~~~~-~~~~~~~~~~~l~~~L~~-~~~~-~-~~p~~~~f~~~~~~~~~~~~~-~~~~L~~~gI~v~~~~~~~-----~~~  399 (422)
                      +|++ ++++++++++.+.+.|++ ++.+ . ..|.+|+|+|+++++..+..+ +.+.|.++||.++++..+.     ..+
T Consensus       317 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~  396 (425)
T 2r2n_A          317 AHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSP  396 (425)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTCSCCHHHHHTHHHHTTEECEEGGGGSSSTTSCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCCCCHHHHHHHHHHHCCcEEechhhhcCCCCCCCC
Confidence            4566 888999999999999987 4444 3 457889999999986555556 5778889999999987632     358


Q ss_pred             eEEEEecChhhHHHHHHHHhhh
Q 014594          400 YVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       400 ~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ++||+++.. +.+++.+++++|
T Consensus       397 ~iRis~~~~-~~~~i~~~~~~l  417 (425)
T 2r2n_A          397 YLRASFSSA-SPEQMDVAFQVL  417 (425)
T ss_dssp             EEEEECSSC-CHHHHHHHHHHH
T ss_pred             EEEEEeCCC-CHHHHHHHHHHH
Confidence            999999722 124455555543

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=100.00  E-value=7.7e-41  Score=327.50  Aligned_cols=323  Identities=21%  Similarity=0.248  Sum_probs=259.1

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCCcchHH-HHHHHHHHc----C--CCCCCEEEeCCHHHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDPESRR-LRAALAKDS----G--LESDHILVGCGADELIDLIMRC  165 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y~~~~~~~-lr~~la~~~----~--~~~~~i~~~~G~~~al~~~~~~  165 (422)
                      +++|+|+.+++++++++++.+++.+ +.. ...|+.. ..+ +|+++++++    |  +++++|++|+|++++++.++++
T Consensus        28 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~  106 (390)
T 1d2f_A           28 ADLLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRW-KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQ  106 (390)
T ss_dssp             --CEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCCCS-CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHH
T ss_pred             CCeeEeeecCCCCCCCHHHHHHHHHHHhCCCCCCCCC-ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHH
Confidence            4689999999999999999999876 322 3567665 677 999999986    5  6788999999999999999999


Q ss_pred             hcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC---CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594          166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (422)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~---~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~  242 (422)
                      ++++||+|+++.|+|+.+...++..|++++.+|.+.   +|.+|++++++.+++.++++|++++|+||||.+++.+++++
T Consensus       107 l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~  186 (390)
T 1d2f_A          107 WSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEI  186 (390)
T ss_dssp             SSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHH
T ss_pred             hcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHH
Confidence            999999999999999999999999999999998642   34599999999997458999999999999999999666655


Q ss_pred             HHc---C-CCeEEEccCCccccCCCch---hhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcC---C
Q 014594          243 ILE---M-PILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQ---P  311 (422)
Q Consensus       243 i~~---~-~~~li~Deay~~~~~~~~~---~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~---~  311 (422)
                      |++   . |+++|+||+|.++.+++..   ...+...-... +.||||.+|++|+|+||++++ +++++.+.....   .
T Consensus       187 l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~  265 (390)
T 1d2f_A          187 MADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDG  265 (390)
T ss_dssp             HHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECCHHHHHHHHHHHhhhcc
Confidence            554   3 9999999999998764321   11121110024 999999999999999999985 788888776543   4


Q ss_pred             C-CCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHcc-CCCCccc-CCCceEEEEEeCCC-CCHHHHHHHHH-h
Q 014594          312 Y-NVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKD-VPFLNPY-PSYSNFILCEVTSG-MDAKKLKDDLA-K  384 (422)
Q Consensus       312 ~-~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~-~~~~~~~-p~~~~f~~~~~~~~-~~~~~~~~~L~-~  384 (422)
                      + +.+++.+.++.++|++ .++++ .+++++++++++.+.|++ ++.+.+. +.+++++|++++.. .+..++.+.|. +
T Consensus       266 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  345 (390)
T 1d2f_A          266 LSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQ  345 (390)
T ss_dssp             CCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCCCHHHHHHHHHHT
T ss_pred             cCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecCCccEEEEEEccccCCCHHHHHHHHHHH
Confidence            4 7899999999888875 46777 888999999999999988 6555544 44456778999753 67889999998 7


Q ss_pred             CCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          385 MGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       385 ~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +||.++++..+.  .++++||+++..+  +++.+++++|
T Consensus       346 ~gi~v~~g~~f~~~~~~~~Ris~~~~~--~~l~~~l~~l  382 (390)
T 1d2f_A          346 EKVAIMPGYTYGEEGRGFVRLNAGCPR--SKLEKGVAGL  382 (390)
T ss_dssp             TCEECEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred             cCEEeeCccccCCCCCCeEEEEecCCH--HHHHHHHHHH
Confidence            899999987542  4689999999753  5677777765

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=100.00  E-value=1.6e-40  Score=324.85  Aligned_cols=329  Identities=20%  Similarity=0.318  Sum_probs=264.5

Q ss_pred             HHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCCcchHHHHHHHH----HHcC--CCCCCEEEeCCHHH
Q 014594           86 LSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDPESRRLRAALA----KDSG--LESDHILVGCGADE  157 (422)
Q Consensus        86 ~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y~~~~~~~lr~~la----~~~~--~~~~~i~~~~G~~~  157 (422)
                      ...+++  +.++|+|+.++++++++|++.+++.+ +.. .+.|+. +..+++++++    +++|  +++++|++|+|+++
T Consensus        25 ~~~~~~--~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~-~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~  101 (391)
T 4dq6_A           25 MEKKYG--TNDLLPMWVADMDFKAAPCIIDSLKNRLEQEIYGYTT-RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIP  101 (391)
T ss_dssp             HHHHHS--CSCSEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCBC-CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHH
T ss_pred             cccccC--CCCceeccccCCCCCCCHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHH
Confidence            344555  36789999999999999999999986 332 345643 2345555555    4567  67889999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC----CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCc
Q 014594          158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK----SDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (422)
Q Consensus       158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~----~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~  233 (422)
                      +++.++++++++||+|+++.|+|..+...++..|++++.++.+    .++.+|+++++++++ . +++|++++|+||||.
T Consensus       102 a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~-~~~v~i~~p~nptG~  179 (391)
T 4dq6_A          102 AISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIK-D-VKLFILCNPHNPVGR  179 (391)
T ss_dssp             HHHHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCT-T-EEEEEEESSBTTTTB
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhh-c-CCEEEEECCCCCCCc
Confidence            9999999999999999999999999999999999999999865    234589999999997 4 999999999999999


Q ss_pred             CCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhc--CCcEEEEccChhhhccccccceeeecCH-HHHH
Q 014594          234 IINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIE  303 (422)
Q Consensus       234 ~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~--~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~  303 (422)
                      +++.+++++|++.    |+++|+||+|.+|.+++.   ....+..  .++++++.|+||.+|++|+|+||+++++ ++++
T Consensus       180 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~  259 (391)
T 4dq6_A          180 VWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYK  259 (391)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHH
T ss_pred             CcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHH
Confidence            9999888888653    999999999999876442   2222211  4788999999999999999999999875 8888


Q ss_pred             HHHHhc---CCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHcc-CCCCcc-cCCCceEEEEEeCC-CCCH
Q 014594          304 YLWRAK---QPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKD-VPFLNP-YPSYSNFILCEVTS-GMDA  375 (422)
Q Consensus       304 ~l~~~~---~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~-~~~~~~-~p~~~~f~~~~~~~-~~~~  375 (422)
                      .+....   ..++.+.+.+.++.++|++ .++++ .+++++++++++.+.|++ ++.+.+ .+.+++++|++++. +.+.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (391)
T 4dq6_A          260 LLDDAFTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSALGLSD  339 (391)
T ss_dssp             HHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEEECGGGCCCH
T ss_pred             HHHHHHHhhcCCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCccEEEEEEhhhcCCCH
Confidence            877653   3457899999999888876 46677 889999999999999987 665654 45556777899985 6789


Q ss_pred             HHHHHHHHhC-CcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          376 KKLKDDLAKM-GVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       376 ~~~~~~L~~~-gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .++.+.|.++ ||.++++..+  ..++++||+++.++  +++.+++++|
T Consensus       340 ~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~--~~i~~~l~~l  386 (391)
T 4dq6_A          340 EELESILVQKGKVALNQGNSFGIGGSGYQRINLACPR--SMLEEALIRI  386 (391)
T ss_dssp             HHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCSCH--HHHHHHHHHH
T ss_pred             HHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcCCH--HHHHHHHHHH
Confidence            9999999977 9999997663  34689999999643  5577766654

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=1.3e-41  Score=336.95  Aligned_cols=323  Identities=20%  Similarity=0.235  Sum_probs=260.8

Q ss_pred             CCeEEcCCCCCCC--CCCHHHHHHHhc-CCC----CCCCCC-cchHHHHHHHHHHc----C---CCCCCEEEeCCHHHHH
Q 014594           95 EDIVKIDANENPY--GPPPEVREALGQ-LKF----PYIYPD-PESRRLRAALAKDS----G---LESDHILVGCGADELI  159 (422)
Q Consensus        95 ~~~i~l~~~~~~~--~~~~~v~~al~~-~~~----~~~y~~-~~~~~lr~~la~~~----~---~~~~~i~~~~G~~~al  159 (422)
                      +++|+|+.|.++.  .+++++.+++.+ +..    ...|+. .+..++|+++++++    |   +++++|++|+|+++++
T Consensus        43 ~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al  122 (425)
T 1vp4_A           43 KDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQAL  122 (425)
T ss_dssp             TTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHH
T ss_pred             CCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHH
Confidence            4689999987543  366788888765 221    256754 47899999999999    8   6678999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-------CCCeEEE-EeCCCCcc
Q 014594          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-------EKPKCIF-LTSPNNPD  231 (422)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------~~~~~i~-l~~p~NPt  231 (422)
                      ..++++++++||+|+++.|+|..+...++..|++++.++.+++ ++|++++++.+++       .++++|+ +++|+|||
T Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~npt  201 (425)
T 1vp4_A          123 DLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD-GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPA  201 (425)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT-EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTT
T ss_pred             HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC-CCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCC
Confidence            9999999999999999999999999999999999999986544 5899999999874       2789985 67999999


Q ss_pred             CcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHH
Q 014594          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY  304 (422)
Q Consensus       232 G~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~  304 (422)
                      |.+++.+++++|++.    |+++|+||+|.+|.+++.   ....++..+++++++||||.++ +|+|+||+++++++++.
T Consensus       202 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~  280 (425)
T 1vp4_A          202 GVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRIGMVAGSKEFIRK  280 (425)
T ss_dssp             CCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGGCEEEEECCHHHHHH
T ss_pred             CCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccc-cccceEEEeeCHHHHHH
Confidence            999999887777653    999999999999875432   2333344578999999999999 99999999999999998


Q ss_pred             HHHhcCC--CCCcHHHHHHHHHHccCC---hHHH-HHHHHHHHHHHHHHHHccC-C---CCcc-cCCCceEEEEEeCCCC
Q 014594          305 LWRAKQP--YNVSVAAEVAACAALQNP---IYLE-VKEALIKERERLFKLLKDV-P---FLNP-YPSYSNFILCEVTSGM  373 (422)
Q Consensus       305 l~~~~~~--~~~~~~~~~aa~~~L~~~---~~~~-~~~~~~~~~~~l~~~L~~~-~---~~~~-~p~~~~f~~~~~~~~~  373 (422)
                      +......  ++.+++.|.++.++|++.   ++++ .+++++++++++.+.|+++ +   .+.+ .|.+++|+|++++.+.
T Consensus       281 l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~~  360 (425)
T 1vp4_A          281 IVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGF  360 (425)
T ss_dssp             HHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTC
T ss_pred             HHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCCCC
Confidence            8765543  677999999999999874   4556 8888999999999999874 3   3443 5778899999998666


Q ss_pred             CHHHHHHHHHhCCcEEEeCCCC----CCCCeEEEEecChhhHHHHHHHHhh
Q 014594          374 DAKKLKDDLAKMGVMIRHYNNK----ELKGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       374 ~~~~~~~~L~~~gI~v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~  420 (422)
                      +..++.+.|.++||.++++..+    ..++++||+++.. +.+++.+++++
T Consensus       361 ~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~-~~e~i~~~l~~  410 (425)
T 1vp4_A          361 DTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLP-PDEKIVEGIKR  410 (425)
T ss_dssp             CTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSSS-CHHHHHHHHHH
T ss_pred             CHHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeCCC-CHHHHHHHHHH
Confidence            7788999999889999987653    2468999999864 12444444443

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.8e-41  Score=333.06  Aligned_cols=323  Identities=24%  Similarity=0.364  Sum_probs=262.6

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCCc-chHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHHHHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMRC  165 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y~~~-~~~~lr~~la~~~----~--~~~~-~i~~~~G~~~al~~~~~~  165 (422)
                      ++|+|+.|++++++++.+.+++.+ +.. ...|+.. +..++|+++++++    |  ++++ +|++|+|+++++..++++
T Consensus        26 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~  105 (411)
T 2o0r_A           26 GAVNLGQGFPDEDGPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLG  105 (411)
T ss_dssp             TCEESSCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHH
T ss_pred             CeeeccCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHH
Confidence            479999999998889999999876 322 3568654 6899999999996    6  4677 999999999999999999


Q ss_pred             hcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC---CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594          166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (422)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~---~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~  242 (422)
                      ++++||+|+++.|+|+.+...++..|++++.++.+.   ++.+|++++++.++ +++++|++++|+||||.+++.+++++
T Consensus       106 ~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~~~nptG~~~~~~~l~~  184 (411)
T 2o0r_A          106 LVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVT-PRTRALIINSPHNPTGAVLSATELAA  184 (411)
T ss_dssp             HCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             hcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhc-cCceEEEEeCCCCCCCCCCCHHHHHH
Confidence            999999999999999999999999999999998643   46799999999997 68999999999999999999877766


Q ss_pred             HHcC----CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CC
Q 014594          243 ILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PY  312 (422)
Q Consensus       243 i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~  312 (422)
                      |++.    |+++|+||+|.++.+++.   ....+. ..++++++.|+||.+|++|+|+||+++++++++.+.....  .+
T Consensus       185 i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~  264 (411)
T 2o0r_A          185 IAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAELIAGVRAAKQYLSY  264 (411)
T ss_dssp             HHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCHHHHHHHHHHHhhccC
Confidence            6553    999999999999875432   122222 2567999999999999999999999999999988876544  57


Q ss_pred             CCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC--CCCHHHHHHHHH-hCCc
Q 014594          313 NVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS--GMDAKKLKDDLA-KMGV  387 (422)
Q Consensus       313 ~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~--~~~~~~~~~~L~-~~gI  387 (422)
                      +.+.+.+.++.++|+. .++++ .+++++++++++.+.|+++++....+..++|+|++++.  +.+..++.+.|. ++||
T Consensus       265 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi  344 (411)
T 2o0r_A          265 VGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEIGFAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEKVGV  344 (411)
T ss_dssp             CCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHTCEECCCCBSSEEEEECGGGTCCCHHHHHHHHHHHHSE
T ss_pred             CCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCCEecCCCeeEEEEEecCCCCCCCHHHHHHHHHHhCCE
Confidence            7788888888888875 46677 88999999999999998875333345567799999974  257888999887 7899


Q ss_pred             EEEeCCCC-C------------CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          388 MIRHYNNK-E------------LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       388 ~v~~~~~~-~------------~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .++++..+ .            .++++||+++..+  +++.+++++|
T Consensus       345 ~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~~~--e~i~~~~~~l  389 (411)
T 2o0r_A          345 AAIPMSAFCDPAAGQASQQADVWNHLVRFTFCKRD--DTLDEAIRRL  389 (411)
T ss_dssp             ECEEGGGGSCCC--------CCGGGCEEEECCSCH--HHHHHHHHHH
T ss_pred             EEcChhhhCCCccccccccccCCCCeEEEEecCCH--HHHHHHHHHH
Confidence            99987542 1            3579999998632  4566555554

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=100.00  E-value=1.5e-40  Score=328.50  Aligned_cols=304  Identities=18%  Similarity=0.212  Sum_probs=250.8

Q ss_pred             CCeEEcCCCCC-----CCCCCHHHHHHHhcCCC--CCCCC-CcchHHHHHHHHHHc-CC-CCC---CEEEeCCHHHHHHH
Q 014594           95 EDIVKIDANEN-----PYGPPPEVREALGQLKF--PYIYP-DPESRRLRAALAKDS-GL-ESD---HILVGCGADELIDL  161 (422)
Q Consensus        95 ~~~i~l~~~~~-----~~~~~~~v~~al~~~~~--~~~y~-~~~~~~lr~~la~~~-~~-~~~---~i~~~~G~~~al~~  161 (422)
                      .++|+|+.|++     ++++++.+.+++.+...  ...|+ ..|..++|+++++++ +. .++   +|++|+|+++++..
T Consensus        38 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~  117 (418)
T 3rq1_A           38 ENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHH  117 (418)
T ss_dssp             GGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHH
T ss_pred             CCeEECCCCcccCCCCCccccHHHHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCccccccEEECCchHHHHHH
Confidence            46899999965     88899999999887432  24674 458899999999987 22 256   99999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC-CCCCCCCHHHHHHHhhcC---CCe-EEEEeCC-CCccCcCC
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVERE---KPK-CIFLTSP-NNPDGSII  235 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~---~~~-~i~l~~p-~NPtG~~~  235 (422)
                      ++++++++||+|+++.|+|..|...++..|++++.++. ++++++|++.+++.+++.   +++ ++++++| |||||.++
T Consensus       118 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~  197 (418)
T 3rq1_A          118 LIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSI  197 (418)
T ss_dssp             HHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCC
T ss_pred             HHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCC
Confidence            99999999999999999999999999999999999996 355799999999998741   566 7888899 99999999


Q ss_pred             CHHHHHHHHc---------C-CCeEEEccCCccccCCCchh-hh---hh-cCCc--EEEEccChhhhccccccceeeec-
Q 014594          236 NDEDLLKILE---------M-PILVVLDEAYTEFSGLESRM-EW---VK-KHDN--LIVLRTFSKRAGLAGLRVGYGAF-  297 (422)
Q Consensus       236 ~~e~l~~i~~---------~-~~~li~Deay~~~~~~~~~~-~~---~~-~~~~--~i~~~S~SK~~~~~G~r~G~i~~-  297 (422)
                      +.+++.+|++         . |+++|+||+|.+|.+++... ..   .. ..++  +++++||||.+|++|+|+||+++ 
T Consensus       198 ~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~  277 (418)
T 3rq1_A          198 EDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGI  277 (418)
T ss_dssp             CHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEE
T ss_pred             CHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEE
Confidence            9999998876         5 89999999999998754321 11   11 1344  58899999999999999999999 


Q ss_pred             --CHHHHHHHHHhcC------CCCCcHHHHHHHHHHccCCh----HHH----HHHHHHHHHHHHHHHHccCCCCcccCCC
Q 014594          298 --PLSIIEYLWRAKQ------PYNVSVAAEVAACAALQNPI----YLE----VKEALIKERERLFKLLKDVPFLNPYPSY  361 (422)
Q Consensus       298 --~~~~~~~l~~~~~------~~~~~~~~~~aa~~~L~~~~----~~~----~~~~~~~~~~~l~~~L~~~~~~~~~p~~  361 (422)
                        ++++++.+.....      ..+++.+++.++..+|++.+    |.+    ++++++++++.+.+.|+++++....+.+
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~  357 (418)
T 3rq1_A          278 SDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVGLPMLPYRG  357 (418)
T ss_dssp             ESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCS
T ss_pred             eCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc
Confidence              9999998876532      24688999999999998863    433    5678889999999999887643445667


Q ss_pred             ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014594          362 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG  406 (422)
Q Consensus       362 ~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~  406 (422)
                      ++|+|++++   +..++.+.|.++||.++++.     +++||+++
T Consensus       358 ~~~~~~~~~---~~~~~~~~l~~~gi~v~~g~-----~~iRis~~  394 (418)
T 3rq1_A          358 GFFITIPTD---SANAICEELKKEHIYVIALA-----NGIRIAAC  394 (418)
T ss_dssp             SSEEEEECT---THHHHHHHHHHTTEECEECS-----SEEEEEGG
T ss_pred             eEEEEcCCC---CHHHHHHHHHhCCEEEecCC-----CCeEEEEe
Confidence            788998874   68899999999999999974     78999987

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=100.00  E-value=7.5e-41  Score=329.33  Aligned_cols=323  Identities=22%  Similarity=0.333  Sum_probs=260.0

Q ss_pred             CCCeEEcCCCCCCCC--CCHHHHHHHhcC-C----CCCCCCCc-chHHHHHHHHHHc----C--CCCCCEEEeCCHHHHH
Q 014594           94 PEDIVKIDANENPYG--PPPEVREALGQL-K----FPYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCGADELI  159 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~--~~~~v~~al~~~-~----~~~~y~~~-~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al  159 (422)
                      +.++|+|+.+.++..  +++++.+++.+. .    ... |+.. +..++|+++++++    |  +++++|++|+|+++++
T Consensus        33 g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~  111 (407)
T 2zc0_A           33 GVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGAL  111 (407)
T ss_dssp             SCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHH
T ss_pred             CCceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHH
Confidence            447899998876543  567888877652 1    124 7554 7899999999998    7  5678999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhh----c-CCCeEEE-EeCCCCccCc
Q 014594          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE----R-EKPKCIF-LTSPNNPDGS  233 (422)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~----~-~~~~~i~-l~~p~NPtG~  233 (422)
                      ..++++++++||+|+++.|+|..+...++..|++++.++.+++ ++|++++++.++    + .++++|+ +++|+||||.
T Consensus       112 ~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~  190 (407)
T 2zc0_A          112 DLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDND-GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGV  190 (407)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCC
T ss_pred             HHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCC-CCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCc
Confidence            9999999999999999999999999999999999999986544 589999999986    4 3788875 5699999999


Q ss_pred             CCCHHHHHHHHc---C-CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHH
Q 014594          234 IINDEDLLKILE---M-PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  306 (422)
Q Consensus       234 ~~~~e~l~~i~~---~-~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~  306 (422)
                      +++.+++++|++   . |+++|+||+|.++.+++.   ....++..+++++++||||.++ +|+|+||+++++++++.+.
T Consensus       191 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~~~  269 (407)
T 2zc0_A          191 TMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLG-TGFRIGWIIAEGEILKKVL  269 (407)
T ss_dssp             CCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTC-TTSCCEEEECCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccC-CCcceEEEecCHHHHHHHH
Confidence            999996666554   4 999999999999875432   2233334468999999999999 9999999999999999988


Q ss_pred             HhcCC--CCCcHHHHHHHHHHccCC----hHHH-HHHHHHHHHHHHHHHHcc-CCCCcc-cCCCceEEEEEeCCCCCHHH
Q 014594          307 RAKQP--YNVSVAAEVAACAALQNP----IYLE-VKEALIKERERLFKLLKD-VPFLNP-YPSYSNFILCEVTSGMDAKK  377 (422)
Q Consensus       307 ~~~~~--~~~~~~~~~aa~~~L~~~----~~~~-~~~~~~~~~~~l~~~L~~-~~~~~~-~p~~~~f~~~~~~~~~~~~~  377 (422)
                      .....  ++.+++.+.++.++|++.    ++++ .+++++++++++.+.|++ ++.+.+ .|.+++|+|++++++.+..+
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (407)
T 2zc0_A          270 MQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLPEGADGIS  349 (407)
T ss_dssp             HHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSBSSEEEEECSTTCCHHH
T ss_pred             HHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCcEEEEEEcCCCCCHHH
Confidence            76655  457899999999999876    4555 888899999999999987 444443 56778999999987778999


Q ss_pred             HHHHHHhC-CcEEEeCCCC----CCCCeEEEEecC--hhhHHHHHHHHh
Q 014594          378 LKDDLAKM-GVMIRHYNNK----ELKGYVRVSVGK--PEHTDALMECLM  419 (422)
Q Consensus       378 ~~~~L~~~-gI~v~~~~~~----~~~~~iRis~~~--~~~~~~l~~al~  419 (422)
                      +.+.|.++ ||.++++..+    ..++++||+++.  .++++++.++|+
T Consensus       350 l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~  398 (407)
T 2zc0_A          350 FANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKLA  398 (407)
T ss_dssp             HHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHHH
T ss_pred             HHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHHH
Confidence            99999876 9999987653    246899999985  344555554444

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=100.00  E-value=3.9e-41  Score=334.16  Aligned_cols=318  Identities=18%  Similarity=0.260  Sum_probs=256.3

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhcC-C------CCCCCC-CcchHHHHHHHHHHc----CCCCCCEEEeCCHHHHHHH
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQL-K------FPYIYP-DPESRRLRAALAKDS----GLESDHILVGCGADELIDL  161 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~------~~~~y~-~~~~~~lr~~la~~~----~~~~~~i~~~~G~~~al~~  161 (422)
                      +.++|+|+.|+++++++|.+.+++.+. .      ...+|+ ..+..+||+++++++    ++++++|++|+|+++++..
T Consensus        55 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~  134 (432)
T 3ei9_A           55 DAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISR  134 (432)
T ss_dssp             TCCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHH
T ss_pred             CCCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHHH
Confidence            467999999999999999999988752 1      124674 457899999999996    7888999999999999998


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCC------------EEEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCC
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGA------------AVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSP  227 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~------------~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p  227 (422)
                      + ..++++||.|+++.|+|+.+...++..|.            +++.++.+.  ++..|+++      .+++++|++++|
T Consensus       135 l-~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~v~l~~p  207 (432)
T 3ei9_A          135 L-QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST------VGRTDIIFFCSP  207 (432)
T ss_dssp             H-HHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG------CCCCSEEEEESS
T ss_pred             H-HHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh------CCCCCEEEEeCC
Confidence            5 66889999999999999999988888774            567777543  34455432      267899999999


Q ss_pred             CCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCch--hhhh-hcCCcEEEEccChhhhccccccceeeecCHH
Q 014594          228 NNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (422)
Q Consensus       228 ~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~  300 (422)
                      |||||.+++.+++.+|++.    |+++|+||+|.+|..++..  +... ...+++++++||||.||++|+|+||++++++
T Consensus       208 ~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~  287 (432)
T 3ei9_A          208 NNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKK  287 (432)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTT
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChH
Confidence            9999999999999998654    9999999999998765322  2222 2346789999999999999999999999988


Q ss_pred             H--------HHHHHHhc--CCCCCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEE
Q 014594          301 I--------IEYLWRAK--QPYNVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILC  367 (422)
Q Consensus       301 ~--------~~~l~~~~--~~~~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~  367 (422)
                      +        ++.+.+..  ..++.+++++.++.+++.+.  +|++ ++++++++++++.+.|+++++....+.+++|+|+
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~  367 (432)
T 3ei9_A          288 LLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWV  367 (432)
T ss_dssp             CBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEECSSSSEEEE
T ss_pred             HhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEE
Confidence            7        66665443  34568999999999999753  5666 8899999999999999988644444578999999


Q ss_pred             EeCCCCCHHHHHHHHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          368 EVTSGMDAKKLKDDLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       368 ~~~~~~~~~~~~~~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +++ +.+..++.+.|+ ++||.++++..+  ..++++||++..++  +++.+++++|
T Consensus       368 ~~~-~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~~~--e~l~~~l~rl  421 (432)
T 3ei9_A          368 HFP-NQSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHR--ENILEACRRF  421 (432)
T ss_dssp             ECT-TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred             ECC-CCCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence            998 667888888887 569999998763  34789999997643  6688888876

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=100.00  E-value=1.2e-40  Score=327.61  Aligned_cols=324  Identities=15%  Similarity=0.230  Sum_probs=262.9

Q ss_pred             CCeEEcCCCC-CCCCCCHHHHHHHhcC-CC--CCCC-CCcchHHHHHHHHHH----cCCC--C-CCEEEeCCHHHHHHHH
Q 014594           95 EDIVKIDANE-NPYGPPPEVREALGQL-KF--PYIY-PDPESRRLRAALAKD----SGLE--S-DHILVGCGADELIDLI  162 (422)
Q Consensus        95 ~~~i~l~~~~-~~~~~~~~v~~al~~~-~~--~~~y-~~~~~~~lr~~la~~----~~~~--~-~~i~~~~G~~~al~~~  162 (422)
                      .++|+|+.|. ++++++|++++++.+. ..  ...| +..+..+++++++++    +|++  + ++|++|+|+++++..+
T Consensus        39 ~~~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~  118 (407)
T 3nra_A           39 GRPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLA  118 (407)
T ss_dssp             SCCEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHH
T ss_pred             CceeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHH
Confidence            3589999965 5588899999988763 21  1346 344667777776665    4653  4 7999999999999999


Q ss_pred             HHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC------CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR------KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (422)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~------~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (422)
                      +++++++||+|+++.|+|..+...++..|++++.++.      ++++.+|++++++.++ .++++|++++|+||||.+++
T Consensus       119 ~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~nptG~~~~  197 (407)
T 3nra_A          119 VAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFK-AGARVFLFSNPNNPAGVVYS  197 (407)
T ss_dssp             HHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHH-TTCCEEEEESSCTTTCCCCC
T ss_pred             HHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHh-hCCcEEEEcCCCCCCCcccC
Confidence            9999999999999999999999999999999999997      4678899999999997 58999999999999999999


Q ss_pred             HHHHHHHHc---C-CCeEEEccCCccccCCCch---hhhh--hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHH
Q 014594          237 DEDLLKILE---M-PILVVLDEAYTEFSGLESR---MEWV--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR  307 (422)
Q Consensus       237 ~e~l~~i~~---~-~~~li~Deay~~~~~~~~~---~~~~--~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~  307 (422)
                      .+++++|++   . |+++|+||+|..+.+++..   ....  ...++++++.||||.+|++|+|+||+++++++++.+..
T Consensus       198 ~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~  277 (407)
T 3nra_A          198 AEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIARMEK  277 (407)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHHHHHH
Confidence            777666655   3 9999999999998765422   2222  23678999999999999999999999999999998876


Q ss_pred             hcCC--CCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC-CCCHHHHHHH
Q 014594          308 AKQP--YNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKLKDD  381 (422)
Q Consensus       308 ~~~~--~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~-~~~~~~~~~~  381 (422)
                      ....  ++.+++.+.++.++|++ .++++ .+++++++++++.+.|++++.+.+ .+.+++|+|++++. +.+..++.+.
T Consensus       278 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (407)
T 3nra_A          278 LQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLAVAPAEFVKI  357 (407)
T ss_dssp             HHHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCBSSCHHHHHHH
T ss_pred             HHhhhccCCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCCCCCHHHHHHH
Confidence            6543  56778889888888875 46777 888999999999999999865554 56667999999986 6788999999


Q ss_pred             HH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          382 LA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       382 L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      |+ ++||.++++..+  ...+++||+++..  .+++++++++|
T Consensus       358 l~~~~gi~v~~g~~~~~~~~~~iRis~~~~--~~~i~~~~~~l  398 (407)
T 3nra_A          358 LRLQAGVVVTPGTEFSPHTADSVRLNFSQD--HEAAVAAARRI  398 (407)
T ss_dssp             HHHHHCEECEEGGGTCTTCTTBEEEECCSC--HHHHHHHHHHH
T ss_pred             HHHhCCEEEeCchhhCCCCCCEEEEEeCCC--HHHHHHHHHHH
Confidence            97 579999987763  3578999999863  35566666554

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=100.00  E-value=6.8e-40  Score=325.57  Aligned_cols=326  Identities=18%  Similarity=0.245  Sum_probs=262.4

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhcCCC--C------------CCCCC-cchHHHHHHHHHHcC--------CCCCCEE
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQLKF--P------------YIYPD-PESRRLRAALAKDSG--------LESDHIL  150 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~~~--~------------~~y~~-~~~~~lr~~la~~~~--------~~~~~i~  150 (422)
                      +..+|+|+.+++++. .+.+.+++.+...  .            .+|++ .|..+||++++++++        +++++|+
T Consensus        37 p~~~i~lg~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~  115 (435)
T 3piu_A           37 TNGIIQMGLAENQLC-FDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLV  115 (435)
T ss_dssp             TTSBEECSSCCCCSS-HHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEE
T ss_pred             CCCeEEecccccccc-HHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEE
Confidence            345899999999997 6777788776311  0            35754 478999999999987        6789999


Q ss_pred             EeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH-HcCCEEEEecCCC--CCCCCHHHHHHHhhc-----CCCeEE
Q 014594          151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPRKS--DFSLNVELIADAVER-----EKPKCI  222 (422)
Q Consensus       151 ~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~--~~~~d~~~l~~~i~~-----~~~~~i  222 (422)
                      +|+|+++++..++++++++||.|+++.|+|..+...+. ..|++++.++.++  ++.+|++++++++++     .++++|
T Consensus       116 ~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v  195 (435)
T 3piu_A          116 LTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGV  195 (435)
T ss_dssp             EEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred             EcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEE
Confidence            99999999999999999999999999999998887777 6899999999653  567999999999874     378999


Q ss_pred             EEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc----hhhhhhc---------CCcEEEEccChhhh
Q 014594          223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES----RMEWVKK---------HDNLIVLRTFSKRA  285 (422)
Q Consensus       223 ~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~----~~~~~~~---------~~~~i~~~S~SK~~  285 (422)
                      ++++|+||||.+++.+++++|++.    |+++|+||+|..+.+.+.    ......+         .++++++.||||.+
T Consensus       196 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~  275 (435)
T 3piu_A          196 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDL  275 (435)
T ss_dssp             EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSS
T ss_pred             EEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeeccc
Confidence            999999999999999888887654    999999999998665432    1222222         67889999999999


Q ss_pred             ccccccceeeec-CHHHHHHHHHhcCCCCCcHHHHHHHHHHccCChH----HH-HHHHHHHHHHHHHHHHccCCCCcccC
Q 014594          286 GLAGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIY----LE-VKEALIKERERLFKLLKDVPFLNPYP  359 (422)
Q Consensus       286 ~~~G~r~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~----~~-~~~~~~~~~~~l~~~L~~~~~~~~~p  359 (422)
                      |++|+|+||+++ ++++.+.+.+....++.+++.+.++.++|++.++    ++ .+++++++++++.+.|+++++....+
T Consensus       276 g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~  355 (435)
T 3piu_A          276 GLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNG  355 (435)
T ss_dssp             CCGGGCEEEEEESCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEECCC
T ss_pred             CCCceeEEEEEeCCHHHHHHHHHHhhcCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence            999999999999 5778888887777788899999999999988654    34 77889999999999999886433445


Q ss_pred             CCceEEEEEeCCCC------CHHHHHHHHHhC-CcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          360 SYSNFILCEVTSGM------DAKKLKDDLAKM-GVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       360 ~~~~f~~~~~~~~~------~~~~~~~~L~~~-gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .+++|+|++++...      +..++.+.|+++ ||.+.++..+  ..++++||+++.. +.+++.+++++|
T Consensus       356 ~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~-~~e~i~~~l~~l  425 (435)
T 3piu_A          356 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANL-PERTLDLAMQRL  425 (435)
T ss_dssp             CSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSS-CHHHHHHHHHHH
T ss_pred             CeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCC-CHHHHHHHHHHH
Confidence            56699999997433      456788888755 9999987652  4578999999763 235555555544

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=100.00  E-value=7.8e-40  Score=323.81  Aligned_cols=325  Identities=19%  Similarity=0.304  Sum_probs=264.2

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCCcchHHHHHHHHHH----cC--CCCCCEEEeCCHHHHHHHHHHH
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDPESRRLRAALAKD----SG--LESDHILVGCGADELIDLIMRC  165 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y~~~~~~~lr~~la~~----~~--~~~~~i~~~~G~~~al~~~~~~  165 (422)
                      +.++|+|..++++++++|++.+++.+ +. ..+.|+... .+++++++++    ++  +++++|++|+|++++++.++++
T Consensus        60 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~-~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~  138 (421)
T 3l8a_A           60 NPELLQMWVADMDFLPVPEIKEAIINYGREHIFGYNYFN-DDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQA  138 (421)
T ss_dssp             CTTCEECCSSCCCSCCCHHHHHHHHHHHHHCCSSCBCCC-HHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHH
T ss_pred             CCCeeecccCCCCCCCCHHHHHHHHHHHhcCCcCCCCCC-HHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHH
Confidence            57899999999999999999999976 32 235564432 5555555555    56  6788999999999999999999


Q ss_pred             hcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC---CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594          166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (422)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~  242 (422)
                      ++++||+|+++.|+|+.+...++..|.+++.+|.+   .++.+|+++|+++++++++++|++++|+||||.+++.+++++
T Consensus       139 ~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~  218 (421)
T 3l8a_A          139 FSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIK  218 (421)
T ss_dssp             HSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHH
T ss_pred             hcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHH
Confidence            99999999999999999999999999999999853   345689999999997678999999999999999999988888


Q ss_pred             HHcC----CCeEEEccCCccccCCCc---hhhhhh--cCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhc---
Q 014594          243 ILEM----PILVVLDEAYTEFSGLES---RMEWVK--KHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAK---  309 (422)
Q Consensus       243 i~~~----~~~li~Deay~~~~~~~~---~~~~~~--~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~---  309 (422)
                      |++.    |+++|+||+|.+|.+.+.   ....+.  ..++++++.|+||.+|++|+|+||++++ +++.+.+....   
T Consensus       219 l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~~~  298 (421)
T 3l8a_A          219 IAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLAN  298 (421)
T ss_dssp             HHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHT
T ss_pred             HHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHHHhc
Confidence            8764    999999999999886442   222221  2478899999999999999999999998 88888887554   


Q ss_pred             CCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC-CCCHHHHHHHHH-h
Q 014594          310 QPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKLKDDLA-K  384 (422)
Q Consensus       310 ~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~-~~~~~~~~~~L~-~  384 (422)
                      ..++.|++++.++.++|+. .+|++ .+++++++++++.+.|++++.+.+ .+.+++++|++++. +.+.+++.+.|. +
T Consensus       299 ~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~  378 (421)
T 3l8a_A          299 NQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYAIAQPQLSEKLQNE  378 (421)
T ss_dssp             TCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGGTCCTTHHHHHHHHT
T ss_pred             ccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEeccccCCCHHHHHHHHHHh
Confidence            3457899999999999874 46777 889999999999999988754554 45566677899975 467889999997 5


Q ss_pred             CCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          385 MGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       385 ~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +||.+.++..+  ..++++||+++.++  +++++++++|
T Consensus       379 ~gi~v~~g~~f~~~~~~~iRi~~~~~~--~~i~~~l~~l  415 (421)
T 3l8a_A          379 AKVVLNDGAHFGKEGKYFARLNVATPK--NTVQEALSRI  415 (421)
T ss_dssp             TCEECEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred             CCEEEECchhhCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence            69999987653  33689999999643  5577777665

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=100.00  E-value=1.6e-40  Score=326.48  Aligned_cols=317  Identities=22%  Similarity=0.289  Sum_probs=247.5

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhcC-C------CCCCC-CCcchHHHHHHHHHH--cC-CCCCCEEEeCCHHHHHHHH
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQL-K------FPYIY-PDPESRRLRAALAKD--SG-LESDHILVGCGADELIDLI  162 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~------~~~~y-~~~~~~~lr~~la~~--~~-~~~~~i~~~~G~~~al~~~  162 (422)
                      +.++|+|+.|+++++++|.+.+++.+. .      ....| +..+..++|++++++  +| +++++|++|+|++++++.+
T Consensus        32 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~al~~~  111 (400)
T 3asa_A           32 QHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFYRGFVDAKEIFISDGAKVDLFRL  111 (400)
T ss_dssp             TSCCEECSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHHHHHH
T ss_pred             CCceEeccCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHcCCCCHHHEEEccChHHHHHHH
Confidence            467899999999999999998887652 1      12567 456889999999999  57 7889999999999999997


Q ss_pred             HHHhcCCCCEEEEcCCCchhHHHHHHHcCCE-EEEecCCC--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA-VVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (422)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~-~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~  239 (422)
                      +. ++++||+|+++.|+|..+...++..|++ ++.++.++  ++..|+++    .  +++++|++++||||||.+++.++
T Consensus       112 ~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~----~--~~~~~v~l~~p~nptG~~~~~~~  184 (400)
T 3asa_A          112 LS-FFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPE----D--THIDILCLCSPNNPTGTVLNKDQ  184 (400)
T ss_dssp             HH-HHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCT----T--CCCSEEEEESSCTTTCCCCCHHH
T ss_pred             HH-HcCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhh----c--cCccEEEEeCCCCCCCCcCCHHH
Confidence            65 5689999999999999999988899998 99998653  33444321    1  57899999999999999999988


Q ss_pred             HHHHHcC----CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHH-------HHH
Q 014594          240 LLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-------IEY  304 (422)
Q Consensus       240 l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~-------~~~  304 (422)
                      +++|++.    |+++|+||+|.+|.+++.   ....++ ..+++++++||||.+|++|+|+||+++++++       ++.
T Consensus       185 l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~  264 (400)
T 3asa_A          185 LRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQ  264 (400)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCBHHH
T ss_pred             HHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhhHHH
Confidence            8877653    999999999998875432   222222 1357899999999999999999999999887       665


Q ss_pred             HHHhc--CC-CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEE-eCCCCCHHHHH
Q 014594          305 LWRAK--QP-YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCE-VTSGMDAKKLK  379 (422)
Q Consensus       305 l~~~~--~~-~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~-~~~~~~~~~~~  379 (422)
                      +....  .. ++.+.+.|.++.++|++. +++ .+++++++++++.+.|++++.....+.+++|+|++ ++.+.+..++.
T Consensus       265 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (400)
T 3asa_A          265 DWERFLSTTFNGASIPAQEAGVAGLSIL-PQLEAIHYYRENSDLLRKALLATGFEVFGGEHAPYLWVKPTQANISDRDLF  343 (400)
T ss_dssp             HHHHHHHHHCCCCCHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHHHTTCEEEECSSSSEEEEECCCTTCCTTTHH
T ss_pred             HHHHHhccCccCCChHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCceEEEEeccCCCCCHHHHH
Confidence            54321  22 468999999999999876 555 88899999999999999885322345678999999 87666777888


Q ss_pred             HHHH-hCCcEEEeCCCCC--CCCeEEEEec-ChhhHHHHHHHH
Q 014594          380 DDLA-KMGVMIRHYNNKE--LKGYVRVSVG-KPEHTDALMECL  418 (422)
Q Consensus       380 ~~L~-~~gI~v~~~~~~~--~~~~iRis~~-~~~~~~~l~~al  418 (422)
                      +.|+ ++||.++++..+.  .++++||++. +.++++++.+.|
T Consensus       344 ~~l~~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~i~~~l~~l  386 (400)
T 3asa_A          344 DFFLREYHIAITPGIGFGRSGSGFVRFSSLGKREDILAACERL  386 (400)
T ss_dssp             HHHHHHHSEECEEGGGGCGGGTTCEEEECCSCHHHHHHHHHHH
T ss_pred             HHHHHhCCEEEeChhHhCCCCCCEEEEEeeCCHHHHHHHHHHH
Confidence            8887 5699999886532  4689999954 444444444443

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=100.00  E-value=1.6e-39  Score=321.49  Aligned_cols=315  Identities=18%  Similarity=0.197  Sum_probs=248.8

Q ss_pred             CCCeEEcCCC---CCCCCCC--HHHHHHHhc-CC--CCCCCC-CcchHHHHHHHHHHcCC------CCC--CEEEeCCHH
Q 014594           94 PEDIVKIDAN---ENPYGPP--PEVREALGQ-LK--FPYIYP-DPESRRLRAALAKDSGL------ESD--HILVGCGAD  156 (422)
Q Consensus        94 ~~~~i~l~~~---~~~~~~~--~~v~~al~~-~~--~~~~y~-~~~~~~lr~~la~~~~~------~~~--~i~~~~G~~  156 (422)
                      ..++|+|+.|   +++..++  +.+.+++.+ +.  ..+.|+ ..|..++|+++++++..      +++  +|++|+|++
T Consensus        48 ~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t  127 (420)
T 4f4e_A           48 RPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGT  127 (420)
T ss_dssp             CSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHH
T ss_pred             CCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCceEEEECCccH
Confidence            3578999999   5555444  899998876 22  235684 45889999999999732      567  899999999


Q ss_pred             HHHHHHH--HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCc
Q 014594          157 ELIDLIM--RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNNP  230 (422)
Q Consensus       157 ~al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NP  230 (422)
                      +++..++  ..++++||+|+++.|+|..+...++..|++++.++.  ++++.+|++.+++.+++  ++++++++++||||
T Consensus       128 ~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NP  207 (420)
T 4f4e_A          128 GALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNP  207 (420)
T ss_dssp             HHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTT
T ss_pred             HHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence            9999994  456899999999999999999999999999999996  45788999999999964  46789999999999


Q ss_pred             cCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC----chh-hhhhcCCcEEEEccChhhhccccccceeeec---C
Q 014594          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE----SRM-EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF---P  298 (422)
Q Consensus       231 tG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~----~~~-~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~---~  298 (422)
                      ||.+++.+++++|++.    |+++|+||+|.+|.++.    ... ......+++++++||||.||++|+|+||+++   +
T Consensus       208 tG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~  287 (420)
T 4f4e_A          208 TGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDS  287 (420)
T ss_dssp             TCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSS
T ss_pred             CCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCC
Confidence            9999999988888764    99999999999998753    122 2223578999999999999999999999864   5


Q ss_pred             HHHHHHH----HHh--cCCCCCcHHHHHHHHHHccCC-------hHHH-HHHHHHHHHHHHHHHHccC----CCCcccCC
Q 014594          299 LSIIEYL----WRA--KQPYNVSVAAEVAACAALQNP-------IYLE-VKEALIKERERLFKLLKDV----PFLNPYPS  360 (422)
Q Consensus       299 ~~~~~~l----~~~--~~~~~~~~~~~~aa~~~L~~~-------~~~~-~~~~~~~~~~~l~~~L~~~----~~~~~~p~  360 (422)
                      +++++.+    ...  ....+.+.+.+.++..+|.+.       ++++ ++++++++++.+.+.|+++    ++....|.
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~  367 (420)
T 4f4e_A          288 KDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQ  367 (420)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHS
T ss_pred             HHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCC
Confidence            6665543    222  123456788899888888874       3455 8889999999999999987    33234577


Q ss_pred             CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014594          361 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH  420 (422)
Q Consensus       361 ~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~  420 (422)
                      +++|+|+.+    +.+.+.+.|.++||.+.++.        ||+++  +.++++++.++|++
T Consensus       368 ~g~~~~~~~----~~~~~~~~l~~~gI~v~~~~--------Ris~~~~~~~~i~~~~~~l~~  417 (420)
T 4f4e_A          368 RGMFSYSGL----TSAQVDRLREEFGIYAVSTG--------RICVAALNTRNLDVVANAIAA  417 (420)
T ss_dssp             CSSEEECCC----CHHHHHHHHHHHCEECCTTS--------EEEGGGCCTTTHHHHHHHHHH
T ss_pred             ccEEEEeCC----CHHHHHHHHHhCCEEecCCC--------eEEEecCCHHHHHHHHHHHHH
Confidence            889999776    45667777779999999853        99998  45556666666654

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=100.00  E-value=1.8e-39  Score=315.97  Aligned_cols=305  Identities=22%  Similarity=0.296  Sum_probs=250.7

Q ss_pred             HHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHc-CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH
Q 014594          111 PEVREALGQLKFPYIY-PDPESRRLRAALAKDS-GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA  188 (422)
Q Consensus       111 ~~v~~al~~~~~~~~y-~~~~~~~lr~~la~~~-~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~  188 (422)
                      +++.+++....  ..| +..+..+||+++++++ ++++++|++|+|+++++..++++++++||+|+++.|+|..+...++
T Consensus        46 ~~~~~~~~~~~--~~y~~~~g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~  123 (375)
T 3op7_A           46 EDFYKKLQGTK--LNYGWIEGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPK  123 (375)
T ss_dssp             HHHHHHHHTSC--CSSCCTTCCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHHHH
T ss_pred             HHHHHHHhcCC--cCCCCCCChHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHH
Confidence            34555554422  345 5567899999999998 5788999999999999999999999999999999999999999999


Q ss_pred             HcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH---HHcC-CCeEEEccCCccccCC
Q 014594          189 VNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK---ILEM-PILVVLDEAYTEFSGL  262 (422)
Q Consensus       189 ~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~---i~~~-~~~li~Deay~~~~~~  262 (422)
                      ..|++++.++.+  .++.+|+++++++++ +++++|++++|+||||.+++.+++++   +|+. |+++|+||+|.++...
T Consensus       124 ~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~  202 (375)
T 3op7_A          124 SLGAEVDLWQIEEENGWLPDLEKLRQLIR-PTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSEL  202 (375)
T ss_dssp             HTTCEEEEEEEEGGGTTEECHHHHHHHCC-TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSS
T ss_pred             HcCCEEEEEeccccCCCCCCHHHHHHhhc-cCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccc
Confidence            999999999854  456689999999997 68999999999999999999555555   5555 9999999999998765


Q ss_pred             CchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHccCC-hHHH-HHHHH
Q 014594          263 ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNP-IYLE-VKEAL  338 (422)
Q Consensus       263 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~-~~~~-~~~~~  338 (422)
                       ......+..++++++.||||.+|++|+|+||+++++++++.+.....  .++.+.+.+.++..+|++. ++++ .++.+
T Consensus       203 -~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  281 (375)
T 3op7_A          203 -DVPSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILERNRHIL  281 (375)
T ss_dssp             -CCCCHHHHCTTEEEEEESSSSSSCGGGCCEEEECCHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             -CCCchhhhcCCEEEEeEChhhcCCcccceEEEEeCHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhccHHHHHHHHHHH
Confidence             22222344678899999999999999999999999999999876655  3567889999998888864 4566 78888


Q ss_pred             HHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHH
Q 014594          339 IKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALME  416 (422)
Q Consensus       339 ~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~  416 (422)
                      +++++.+.+.|++++.+. ..|.+++++|+.++.+.+..++++.|+ ++||.++++..+..++++||+++...  +++.+
T Consensus       282 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~--~~i~~  359 (375)
T 3op7_A          282 EENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDMPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFACEQ--ETLIK  359 (375)
T ss_dssp             HHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCSSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEECCCSCH--HHHHH
T ss_pred             HHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCeEEEEecCCH--HHHHH
Confidence            999999999999876555 356777889999887778899998885 89999999887666899999998754  45666


Q ss_pred             HHhhh
Q 014594          417 CLMHL  421 (422)
Q Consensus       417 al~~l  421 (422)
                      ++++|
T Consensus       360 ~l~~l  364 (375)
T 3op7_A          360 GLEKL  364 (375)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            65554

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=100.00  E-value=4.6e-40  Score=326.03  Aligned_cols=322  Identities=15%  Similarity=0.164  Sum_probs=255.8

Q ss_pred             CeEEcCCCCCCCCC---CHHHHHHH--hc-CC----CCCCCCC-cchHHHHHHHHHHcCCCCCCEEEeCCHHHHH--HHH
Q 014594           96 DIVKIDANENPYGP---PPEVREAL--GQ-LK----FPYIYPD-PESRRLRAALAKDSGLESDHILVGCGADELI--DLI  162 (422)
Q Consensus        96 ~~i~l~~~~~~~~~---~~~v~~al--~~-~~----~~~~y~~-~~~~~lr~~la~~~~~~~~~i~~~~G~~~al--~~~  162 (422)
                      ..|+|..|.++...   ++.+.+++  .+ +.    ....|++ .|..+||+++++++++++++|++|+|+++++  +++
T Consensus        34 ~~i~~~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~  113 (427)
T 3ppl_A           34 LKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVI  113 (427)
T ss_dssp             CCEECCCCSCCHHHHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHH
T ss_pred             ceEecCCCCCChHHCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHH
Confidence            46999999876533   22455655  33 21    2367866 4889999999999999999999999999999  588


Q ss_pred             HHHhcC--C----------CCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEe-CCCC
Q 014594          163 MRCVLD--P----------GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNN  229 (422)
Q Consensus       163 ~~~l~~--~----------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~N  229 (422)
                      ++++++  +          ||+|+++.|+|..+...++..|++++.+|.+.+ ++|+++++++++++++++|+++ +|||
T Consensus       114 ~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~l~~~l~~~~~~~v~~~p~~~N  192 (427)
T 3ppl_A          114 SWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNED-GPDMDAVEELVKNPQVKGMWVVPVFSN  192 (427)
T ss_dssp             HHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT-EECHHHHHHHTTSTTEEEEEECCSSCT
T ss_pred             HHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC-CCCHHHHHHHHhcCCCeEEEECCCCCC
Confidence            888877  6          899999999999999999999999999997554 5999999999965789999877 8899


Q ss_pred             ccCcCCCHHHHHHHH----cC-CCeEEEccCCccccCCCc---hhhhh------hcCCcEEEEccChhhhccccccceee
Q 014594          230 PDGSIINDEDLLKIL----EM-PILVVLDEAYTEFSGLES---RMEWV------KKHDNLIVLRTFSKRAGLAGLRVGYG  295 (422)
Q Consensus       230 PtG~~~~~e~l~~i~----~~-~~~li~Deay~~~~~~~~---~~~~~------~~~~~~i~~~S~SK~~~~~G~r~G~i  295 (422)
                      |||.+++.+++++|+    +. |+++|+||+|.++.+.+.   .....      +..+++++++||||. +++|+|+||+
T Consensus       193 PtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~G~r~G~~  271 (427)
T 3ppl_A          193 PTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI-TLAGAGVSFF  271 (427)
T ss_dssp             TTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT-SCTTSSCEEE
T ss_pred             CCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc-cCcCccEEEE
Confidence            999999999666654    44 999999999998654321   11111      256889999999998 7799999999


Q ss_pred             ecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHccC-C---hHHH-HHHHHHHHHHHHHHHHcc----CCCCc-ccCCCce
Q 014594          296 AFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN-P---IYLE-VKEALIKERERLFKLLKD----VPFLN-PYPSYSN  363 (422)
Q Consensus       296 ~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~-~---~~~~-~~~~~~~~~~~l~~~L~~----~~~~~-~~p~~~~  363 (422)
                      ++++++++.+.....  .++.+.+.|.++..+|++ +   ++++ .++.++++++.+.+.|.+    ++.+. ..|++++
T Consensus       272 ~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~  351 (427)
T 3ppl_A          272 LTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGY  351 (427)
T ss_dssp             ECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSS
T ss_pred             EcCHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccE
Confidence            999999998877654  478899999999999998 3   3444 777888888888877754    33344 4678899


Q ss_pred             EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-C-----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          364 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-K-----ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       364 f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~-~-----~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      |+|+++++. +.+++.+.|.++||.+++++. +     ..++++||+++.. +.+++.+++++|
T Consensus       352 ~~~~~~~~~-~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~-~~~~i~~~~~~l  413 (427)
T 3ppl_A          352 FISLDVVPG-TASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLP-PVEELEVAMDGV  413 (427)
T ss_dssp             CEEEECSTT-CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSS-CHHHHHHHHHHH
T ss_pred             EEEEECCcc-hHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCC-CHHHHHHHHHHH
Confidence            999999854 788999999999999999443 2     2578999999874 235666666654

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=100.00  E-value=4.9e-39  Score=315.25  Aligned_cols=316  Identities=16%  Similarity=0.136  Sum_probs=248.1

Q ss_pred             CCCCeEEcCCC---CCCCCCC--HHHHHHHhc-C-C--CCCCCCC-cchHHHHHHHHHHcCC------CCC--CEEEeCC
Q 014594           93 KPEDIVKIDAN---ENPYGPP--PEVREALGQ-L-K--FPYIYPD-PESRRLRAALAKDSGL------ESD--HILVGCG  154 (422)
Q Consensus        93 ~~~~~i~l~~~---~~~~~~~--~~v~~al~~-~-~--~~~~y~~-~~~~~lr~~la~~~~~------~~~--~i~~~~G  154 (422)
                      ...++|+|+.|   +++..++  +.+.+++.+ . .  ....|+. .|..++|++++++++.      +++  +|++|+|
T Consensus        24 ~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g  103 (397)
T 3fsl_A           24 PRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLG  103 (397)
T ss_dssp             CCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESH
T ss_pred             CCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCcccccccceEEEEcCC
Confidence            34578999999   4444444  899988876 3 2  2356855 5889999999999842      678  8999999


Q ss_pred             HHHHHHHHHH--HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhc--CCCeEEEEeCCC
Q 014594          155 ADELIDLIMR--CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPN  228 (422)
Q Consensus       155 ~~~al~~~~~--~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~  228 (422)
                      ++++++.+++  .++++||+|+++.|+|..+...++..|++++.++.  ++++.+|++++++.+++  ++++++++++||
T Consensus       104 ~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~  183 (397)
T 3fsl_A          104 GSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCH  183 (397)
T ss_dssp             HHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSC
T ss_pred             cHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCC
Confidence            9999999954  56799999999999999999999999999999997  46788999999999974  467888889999


Q ss_pred             CccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC--c--h-hhhhhcCCcEEEEccChhhhccccccceeeec--
Q 014594          229 NPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE--S--R-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--  297 (422)
Q Consensus       229 NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~--~--~-~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~--  297 (422)
                      ||||.+++.+++++|++.    |+++|+||+|.+|.++.  .  . .......+++++++||||.+|++|+|+||+++  
T Consensus       184 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~  263 (397)
T 3fsl_A          184 NPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMC  263 (397)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEEC
T ss_pred             CCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEec
Confidence            999999999988877663    99999999999998652  1  1 22224578999999999999999999999974  


Q ss_pred             -CHHHHHHHHHh-----cCC-CCCcHHHHHHHHHHccCC-------hHHH-HHHHHHHHHHHHHHHHccCC---CCc-cc
Q 014594          298 -PLSIIEYLWRA-----KQP-YNVSVAAEVAACAALQNP-------IYLE-VKEALIKERERLFKLLKDVP---FLN-PY  358 (422)
Q Consensus       298 -~~~~~~~l~~~-----~~~-~~~~~~~~~aa~~~L~~~-------~~~~-~~~~~~~~~~~l~~~L~~~~---~~~-~~  358 (422)
                       ++++++.+...     ... .+.+.+++.++..++.+.       ++++ .+++++++++++.+.|++++   .+. ..
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~  343 (397)
T 3fsl_A          264 EDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLL  343 (397)
T ss_dssp             SSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHH
T ss_pred             CCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeec
Confidence             56666544322     123 455788999898888873       4555 88899999999999998863   233 45


Q ss_pred             CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC--hhhHHHHHHHHhh
Q 014594          359 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK--PEHTDALMECLMH  420 (422)
Q Consensus       359 p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~--~~~~~~l~~al~~  420 (422)
                      |.+++|+|+++    +.+.+.+.|.++||.+++++        ||+++.  .++++++.++|++
T Consensus       344 ~~~~~~~~~~~----~~~~~~~~l~~~gi~v~~g~--------Ris~~~~~~~~i~~~~~~l~~  395 (397)
T 3fsl_A          344 NQRGMFSYTGL----SAAQVDRLREEFGVYLIASG--------RMCVAGLNTANVQRVAKAFAA  395 (397)
T ss_dssp             HCCSSEEECCC----CHHHHHHHHHTTCEECCTTC--------EEEGGGCCTTTHHHHHHHHHH
T ss_pred             CCceEEEecCC----CHHHHHHHHHhCCEEECCCC--------eEEEEecCHhhHHHHHHHHHh
Confidence            67889999876    35667777779999999864        999874  4445555555554

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=100.00  E-value=1.8e-39  Score=321.27  Aligned_cols=322  Identities=15%  Similarity=0.158  Sum_probs=255.0

Q ss_pred             CeEEcCCCCCC---CCCCHHHHHHHh--cC-CC---CCCC-CC-cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH--HH
Q 014594           96 DIVKIDANENP---YGPPPEVREALG--QL-KF---PYIY-PD-PESRRLRAALAKDSGLESDHILVGCGADELID--LI  162 (422)
Q Consensus        96 ~~i~l~~~~~~---~~~~~~v~~al~--~~-~~---~~~y-~~-~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~--~~  162 (422)
                      ..|+|+.|.++   ++.++.+.+++.  +. ..   ...| +. .|..+||+++++++++++++|++|+|+++++.  ++
T Consensus        26 ~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~  105 (423)
T 3ez1_A           26 LNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVL  105 (423)
T ss_dssp             CCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHTTSCGGGEEECSSCHHHHHHHHH
T ss_pred             ceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHhCCChhhEEEeCCcHHHHHHHHH
Confidence            35999999988   777788888875  32 21   2568 44 47899999999999999999999999999998  88


Q ss_pred             HHHhcC--C---------CCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhh-cCCCeEEEEe-CCCC
Q 014594          163 MRCVLD--P---------GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE-REKPKCIFLT-SPNN  229 (422)
Q Consensus       163 ~~~l~~--~---------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~~i~l~-~p~N  229 (422)
                      ++++++  +         ||+|+++.|+|..+...++..|++++.++.+.+ ++|+++++++++ .+++++|+++ +|||
T Consensus       106 ~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~l~~~l~~~~~~~~v~~~~~~~N  184 (423)
T 3ez1_A          106 TFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD-GPDVDAVERLAGTDPSVKGILFVPTYSN  184 (423)
T ss_dssp             HHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT-EECHHHHHHHHHSCTTEEEEEECSSSCT
T ss_pred             HHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC-CCCHHHHHHHHhhCCCceEEEECCCCCC
Confidence            888888  8         599999999999999999999999999997554 699999999995 4689999865 8999


Q ss_pred             ccCcCCCHHHHHHHHc----C-CCeEEEccCCccccCCC-------chhhh---hhcCCcEEEEccChhhhcccccccee
Q 014594          230 PDGSIINDEDLLKILE----M-PILVVLDEAYTEFSGLE-------SRMEW---VKKHDNLIVLRTFSKRAGLAGLRVGY  294 (422)
Q Consensus       230 PtG~~~~~e~l~~i~~----~-~~~li~Deay~~~~~~~-------~~~~~---~~~~~~~i~~~S~SK~~~~~G~r~G~  294 (422)
                      |||.+++.+++++|++    . |+++|+||+|.++.+..       +....   .+..+++++++||||. +++|+|+||
T Consensus       185 PtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G~r~G~  263 (423)
T 3ez1_A          185 PGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKI-TFAGAGLGF  263 (423)
T ss_dssp             TTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTT-SCSSSSCEE
T ss_pred             CCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhh-ccCCcceEE
Confidence            9999999997777654    3 99999999999643221       11111   1356889999999998 679999999


Q ss_pred             eecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHccC--C---hHHH-HHHHHHHHHHHHHHHHcc----CC-CCc-ccCC
Q 014594          295 GAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN--P---IYLE-VKEALIKERERLFKLLKD----VP-FLN-PYPS  360 (422)
Q Consensus       295 i~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~--~---~~~~-~~~~~~~~~~~l~~~L~~----~~-~~~-~~p~  360 (422)
                      +++++++++.+.....  .++.+.+.|.++.++|++  +   ++++ .++.++++++.+.+.|.+    ++ .+. ..|.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~  343 (423)
T 3ez1_A          264 VASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPK  343 (423)
T ss_dssp             EEECHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCS
T ss_pred             EEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCC
Confidence            9999999999877653  477899999999999987  4   3444 666777777777666644    54 233 4578


Q ss_pred             CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCC-CC-----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          361 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYN-NK-----ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       361 ~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~-~~-----~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +++|+|+++++. +.+.+.+.|.++||.+++++ .+     ..++++||+++.. +.+++.+++++|
T Consensus       344 ~g~~~~~~~~~~-~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l  408 (423)
T 3ez1_A          344 GGYFISLDTAEP-VADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP-PVEEVRTAMQVV  408 (423)
T ss_dssp             BSSCEEEEESSS-CHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS-CHHHHHHHHHHH
T ss_pred             ccEEEEEECCCC-cHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCC-CHHHHHHHHHHH
Confidence            899999999855 78889999999999999943 32     2468999999853 235566665554

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=100.00  E-value=5.6e-40  Score=321.72  Aligned_cols=305  Identities=22%  Similarity=0.262  Sum_probs=238.2

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhcC---C---CCCCCCCc-ch-----HHHHHHHHHHcC-----CCC-CCEEEeCC
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQL---K---FPYIYPDP-ES-----RRLRAALAKDSG-----LES-DHILVGCG  154 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~---~---~~~~y~~~-~~-----~~lr~~la~~~~-----~~~-~~i~~~~G  154 (422)
                      .+.++|+|+.|++++++++.+.+++.+.   .   ....|++. |.     .+||++++++++     +++ ++|++|+|
T Consensus        20 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~i~~t~G   99 (391)
T 3bwn_A           20 MSDFVVNLDHGDPTAYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHGVVGNAATEDRYIVVGTG   99 (391)
T ss_dssp             TTTSCEECSSCCCGGGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHHHHCSBCCSSSEEEEEEH
T ss_pred             CCCCeeEcCCCCCCCCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHHhcCCCCCCCCeEEEeCC
Confidence            3467899999999987777777776331   1   22568654 66     999999999986     234 69999999


Q ss_pred             HHHHHHHHHHHhcCCCC----EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCc
Q 014594          155 ADELIDLIMRCVLDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNP  230 (422)
Q Consensus       155 ~~~al~~~~~~l~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NP  230 (422)
                      +++++.+++++++++||    +|+++.|+|..|...++..|++++.++.+.+ +++         .+++|+|++++||||
T Consensus       100 ~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~l~---------~~~~k~v~l~~p~NP  169 (391)
T 3bwn_A          100 STQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAW-GFD---------KKGPYIELVTSPNNP  169 (391)
T ss_dssp             HHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEEST-TCC---------CCSCEEEEEESSCTT
T ss_pred             hHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHH-HcC---------CCCCEEEEECCCCCC
Confidence            99999999999999999    9999999999999999999999988885432 222         257899999999999


Q ss_pred             cCcCCCHHHHHHHHcC--C--CeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeec-CHHHHHHH
Q 014594          231 DGSIINDEDLLKILEM--P--ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYL  305 (422)
Q Consensus       231 tG~~~~~e~l~~i~~~--~--~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~~~l  305 (422)
                      ||.+++  +   |++.  +  +++|+||+|.+  .....+.  ...+++++++||||.||++|+|+||+++ ++++++.+
T Consensus       170 tG~~~~--~---l~~~~~~~~~~ii~De~y~~--~~~~~l~--~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l  240 (391)
T 3bwn_A          170 DGTIRE--T---VVNRPDDDEAKVIHDFAYYW--PHYTPIT--RRQDHDIMLFTFSKITGHAGSRIGWALVKDKEVAKKM  240 (391)
T ss_dssp             TCCCCC--C---CC-----CCCEEEEECTTCS--TTTSCCC--CCBCCSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHH
T ss_pred             CchhHH--H---HHHHhhcCCCEEEEeCCCCC--CCCCccc--cCCCCeEEEEechhhcCCCccceEEEEecCHHHHHHH
Confidence            999997  3   4433  4  99999999984  1111111  1457889999999999999999999997 89999988


Q ss_pred             HHhcC--CCCCcHHHHHHHHHHccC-----------ChHHH-HHHHHHHHHHHHHHHHccCCCCccc-------------
Q 014594          306 WRAKQ--PYNVSVAAEVAACAALQN-----------PIYLE-VKEALIKERERLFKLLKDVPFLNPY-------------  358 (422)
Q Consensus       306 ~~~~~--~~~~~~~~~~aa~~~L~~-----------~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-------------  358 (422)
                      .....  .++++.+.|.++..+|++           ..|++ +++.++++++.+.+.|++++.+.+.             
T Consensus       241 ~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~  320 (391)
T 3bwn_A          241 VEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKS  320 (391)
T ss_dssp             HHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEE
T ss_pred             HHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccccccc
Confidence            87665  478899999999999985           45677 8999999999999999987544332             


Q ss_pred             -CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCC-CCeEEEEecChhhHHHHHHHHhhh
Q 014594          359 -PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKEL-KGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       359 -p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~-~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                       |.+|+|+|+++++   .+.+.+.|.++||.+++|..++. ++++|||++.++  +++.+++++|
T Consensus       321 ~~~~g~~~~~~~~~---~~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~~~--e~i~~~~~~L  380 (391)
T 3bwn_A          321 LESYPAFAWLGTKE---ETDLVSELRRHKVMSRAGERCGSDKKHVRVSMLSRE--DVFNVFLERL  380 (391)
T ss_dssp             ECCCCSEEEEEESS---SCCHHHHHHHTTEECEEGGGGTCCTTEEEEESCSCH--HHHHHHHHHH
T ss_pred             CCCcceEEEecCCc---HHHHHHHHHHCCEEEccCCCCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence             3455689999973   23566677799999999887543 689999998743  4455555543

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=100.00  E-value=1.9e-38  Score=311.02  Aligned_cols=314  Identities=15%  Similarity=0.171  Sum_probs=246.5

Q ss_pred             CCeEEcCCCC---CC--CCCCHHHHHHHhcC-C--CCCCC-CCcchHHHHHHHHHHc---C---CCCCCEEE--eCCHHH
Q 014594           95 EDIVKIDANE---NP--YGPPPEVREALGQL-K--FPYIY-PDPESRRLRAALAKDS---G---LESDHILV--GCGADE  157 (422)
Q Consensus        95 ~~~i~l~~~~---~~--~~~~~~v~~al~~~-~--~~~~y-~~~~~~~lr~~la~~~---~---~~~~~i~~--~~G~~~  157 (422)
                      .++|+|+.|+   +.  .++++.+.+++.+. .  ..+.| +..+..++|+++++++   +   +++++|++  |+|+++
T Consensus        26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~  105 (396)
T 2q7w_A           26 PGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTG  105 (396)
T ss_dssp             --CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHH
T ss_pred             CCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchh
Confidence            5689999998   22  25678999888763 1  33567 5668899999999998   3   34789998  999999


Q ss_pred             HHHHHHHHh--cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcC--CCeEEEEeCCCCcc
Q 014594          158 LIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVERE--KPKCIFLTSPNNPD  231 (422)
Q Consensus       158 al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPt  231 (422)
                      +++.+++.+  +++||+|+++.|+|+.+...++..|++++.++.+  +++.+|++++++.+++.  +++++++++|||||
T Consensus       106 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~npt  185 (396)
T 2q7w_A          106 ALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPT  185 (396)
T ss_dssp             HHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTT
T ss_pred             hHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCC
Confidence            999999765  4699999999999999999999999999999964  56789999999998642  46788889999999


Q ss_pred             CcCCCHHHHHHHHcC----CCeEEEccCCccccCCC--c--hhhhh-hcCCcEEEEccChhhhccccccceeeec---CH
Q 014594          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLE--S--RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAF---PL  299 (422)
Q Consensus       232 G~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~--~--~~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~---~~  299 (422)
                      |.+++.+++++|++.    |+++|+||+|.+|.+++  .  ....+ ...+++++++||||.+|++|+|+||+++   ++
T Consensus       186 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~  265 (396)
T 2q7w_A          186 GIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAADS  265 (396)
T ss_dssp             CCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSH
T ss_pred             CCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCCH
Confidence            999999988887764    99999999999988653  1  22222 2357899999999999999999999997   55


Q ss_pred             ----HHHHHHHHh-cCCC-CCcHHHHHHHHHHccCC-------hHHH-HHHHHHHHHHHHHHHHccCC---CCc-ccCCC
Q 014594          300 ----SIIEYLWRA-KQPY-NVSVAAEVAACAALQNP-------IYLE-VKEALIKERERLFKLLKDVP---FLN-PYPSY  361 (422)
Q Consensus       300 ----~~~~~l~~~-~~~~-~~~~~~~~aa~~~L~~~-------~~~~-~~~~~~~~~~~l~~~L~~~~---~~~-~~p~~  361 (422)
                          ++++.+... ...+ +.+.+++.++.++|++.       ++++ .+++++++++++.+.|++++   .+. ..|.+
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~  345 (396)
T 2q7w_A          266 ETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQN  345 (396)
T ss_dssp             HHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCC
T ss_pred             HHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCC
Confidence                455555442 2344 45899999999999875       4566 77889999999999999886   233 35677


Q ss_pred             ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014594          362 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH  420 (422)
Q Consensus       362 ~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~  420 (422)
                      ++|+|++++    .+.+.+.|.++||.++++        +||+++  +.++++++.++|++
T Consensus       346 ~~~~~~~~~----~~~~~~~l~~~gv~v~~~--------~Ris~~~~~~e~i~~~~~~l~~  394 (396)
T 2q7w_A          346 GMFSFSGLT----KEQVLRLREEFGVYAVAS--------GRVNVAGMTPDNMAPLCEAIVA  394 (396)
T ss_dssp             SSEEECCCC----HHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHH
T ss_pred             ceEEEecCC----HHHHHHHHHhcCeeecCC--------ceEEEeecCHHHHHHHHHHHHh
Confidence            888888763    456666677899999874        599998  66667777776654

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=100.00  E-value=3.5e-42  Score=337.41  Aligned_cols=323  Identities=18%  Similarity=0.260  Sum_probs=263.8

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCcchHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHHHHHHhc
Q 014594           96 DIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDPESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVL  167 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~y~~~~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al~~~~~~l~  167 (422)
                      ++++|+.+++++++++++.+++.+. . ....|++. ..++|+++++++    |  +++++|++|+|+++++..++++++
T Consensus        32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~  110 (392)
T 3b1d_A           32 QLLPAWIADMDFEVMPEVKQAIHDYAEQLVYGYTYA-SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFT  110 (392)
Confidence            7899999999999999999998873 2 23567665 788999999876    4  567899999999999999999999


Q ss_pred             CCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-C--CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHH
Q 014594          168 DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-S--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL  244 (422)
Q Consensus       168 ~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~  244 (422)
                      ++||+|+++.|+|+.+...++..|++++.++.+ .  +|.+|++++++.+++.++++|++++|+||||.+++.+++++|+
T Consensus       111 ~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l~  190 (392)
T 3b1d_A          111 KEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIG  190 (392)
Confidence            999999999999999998888899999998863 2  3569999999998756789999999999999999977777776


Q ss_pred             cC----CCeEEEccCCccccCCCc---hhhhhhc--CCcEEEEccChhhhccccccceeeecCH-HHHHHHHHhcCCC--
Q 014594          245 EM----PILVVLDEAYTEFSGLES---RMEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPY--  312 (422)
Q Consensus       245 ~~----~~~li~Deay~~~~~~~~---~~~~~~~--~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~~l~~~~~~~--  312 (422)
                      +.    |+++|+||+|.+|.+.+.   ....+..  .+++++++||||.+|++|+|+||+++++ ++++.+......+  
T Consensus       191 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~  270 (392)
T 3b1d_A          191 HLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNH  270 (392)
Confidence            64    899999999999876432   1222222  5788999999999999999999999975 5888887776655  


Q ss_pred             -CCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHcc-CCCCccc-CCCceEEEEEeCC-CCCHHHHHHHHH-hC
Q 014594          313 -NVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKD-VPFLNPY-PSYSNFILCEVTS-GMDAKKLKDDLA-KM  385 (422)
Q Consensus       313 -~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~-~~~~~~~-p~~~~f~~~~~~~-~~~~~~~~~~L~-~~  385 (422)
                       +.+++.+.++.++|++ .++++ .+++++++++.+.+.|++ ++.+.+. +.+++++|++++. +.+..++.+.|. ++
T Consensus       271 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~l~~~~  350 (392)
T 3b1d_A          271 HEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDYGLTDDALFTLLHDQA  350 (392)
Confidence             4688899999899886 46777 888999999999999987 6545544 4555667899874 356788999996 88


Q ss_pred             CcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          386 GVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       386 gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ||.++++..+.  .++++||+++.++  +++++++++|
T Consensus       351 gi~v~~g~~f~~~~~~~iRi~~~~~~--e~i~~~l~~l  386 (392)
T 3b1d_A          351 KVILNRGSDYGSEGELHARLNIAAPK--SLVEEICKRI  386 (392)
Confidence            99999987643  4679999998753  5687777765

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=100.00  E-value=2.3e-38  Score=312.00  Aligned_cols=314  Identities=17%  Similarity=0.171  Sum_probs=245.4

Q ss_pred             CCCeEEcCCCCC-CCCCCHHHHHHHhcCC--CCCCC-CCcchHHHHHHHHHHc-CCC-----CCCEE--EeCCHHHHHHH
Q 014594           94 PEDIVKIDANEN-PYGPPPEVREALGQLK--FPYIY-PDPESRRLRAALAKDS-GLE-----SDHIL--VGCGADELIDL  161 (422)
Q Consensus        94 ~~~~i~l~~~~~-~~~~~~~v~~al~~~~--~~~~y-~~~~~~~lr~~la~~~-~~~-----~~~i~--~~~G~~~al~~  161 (422)
                      ..++|+|+.|++ ++..++.+.+++.+..  ....| +..|..+||+++++++ +..     +++|.  .+.|+++++..
T Consensus        40 ~~~~i~l~~g~~~d~~~~~~v~~a~~~a~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~  119 (409)
T 4eu1_A           40 AKRKVNLSIGVYRDDADQPFVLECVKQATLGTNMDYAPVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRI  119 (409)
T ss_dssp             CSSCEECCCSSCCCTTSCCCCCHHHHTCCCCSCCCCCCTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHH
T ss_pred             CcCceeeeeeEEECCCCCEeecHHHHhcCccccccCCCCCCcHHHHHHHHHHHcCCCchhhccCceeeeecccchHHHHH
Confidence            457899999996 7777777778877642  23567 5568899999999986 655     67884  59999999987


Q ss_pred             HH---HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCccCcC
Q 014594          162 IM---RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSI  234 (422)
Q Consensus       162 ~~---~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~  234 (422)
                      +.   +.++++||+|+++.|+|..+...++..|++++.++.  ++++++|++++++.+++  .+++++++++||||||.+
T Consensus       120 ~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~  199 (409)
T 4eu1_A          120 GGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVD  199 (409)
T ss_dssp             HHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCC
T ss_pred             HHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCC
Confidence            64   455789999999999999999999999999999996  46688999999999963  356677779999999999


Q ss_pred             CCHHHHHHHHcC----CCeEEEccCCccccCCCc-----hh-hhhhcCCcEEEEccChhhhccccccceee---ecCHH-
Q 014594          235 INDEDLLKILEM----PILVVLDEAYTEFSGLES-----RM-EWVKKHDNLIVLRTFSKRAGLAGLRVGYG---AFPLS-  300 (422)
Q Consensus       235 ~~~e~l~~i~~~----~~~li~Deay~~~~~~~~-----~~-~~~~~~~~~i~~~S~SK~~~~~G~r~G~i---~~~~~-  300 (422)
                      ++.+++++|++.    |+++|+||+|.+|.+++.     .. ...+..+++++++||||.||++|+|+||+   +.+++ 
T Consensus       200 ~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~  279 (409)
T 4eu1_A          200 PTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEE  279 (409)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHH
T ss_pred             CCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHH
Confidence            999997777653    999999999999987541     22 22245678899999999999999999996   56777 


Q ss_pred             ---HHHHHHHhcC--CCCCcHHHHHHHHHHccCCh----H---HH-HHHHHHHHHHHHHHHHccCCC---Cc-ccCCCce
Q 014594          301 ---IIEYLWRAKQ--PYNVSVAAEVAACAALQNPI----Y---LE-VKEALIKERERLFKLLKDVPF---LN-PYPSYSN  363 (422)
Q Consensus       301 ---~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~~----~---~~-~~~~~~~~~~~l~~~L~~~~~---~~-~~p~~~~  363 (422)
                         +++.+.....  .++.+.+.|.++..+|++..    |   ++ .+++++++++++.+.|++++.   +. ..|.+++
T Consensus       280 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~  359 (409)
T 4eu1_A          280 AKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIERQVGM  359 (409)
T ss_dssp             HHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHSCSS
T ss_pred             HHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCceE
Confidence               6666655432  35677899999999998742    3   44 788999999999999998862   33 3567788


Q ss_pred             EEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014594          364 FILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH  420 (422)
Q Consensus       364 f~~~~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~  420 (422)
                      |+|+.++    . ++...|+ ++||.+.++.        ||+++  +.++++++.++|++
T Consensus       360 ~~~~~~~----~-~~~~~ll~~~gv~v~p~~--------Ri~~~~~~~~~i~~~~~~l~~  406 (409)
T 4eu1_A          360 MAYTGLT----R-EQVELLRSEYHIYMTLNG--------RAAVSGLNSTNVEYVSQAIHN  406 (409)
T ss_dssp             EEECCCC----H-HHHHHHHHHHCEECCTTC--------EEEGGGCCTTTHHHHHHHHHH
T ss_pred             EEEeCCC----H-HHHHHHHHcCCEEEcCCC--------EEEEEecCHhhHHHHHHHHHH
Confidence            8886553    3 4455555 7899999863        88876  45667777777765

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=100.00  E-value=1.6e-38  Score=312.27  Aligned_cols=326  Identities=14%  Similarity=0.157  Sum_probs=246.0

Q ss_pred             hHHHHHHhCCC-CCCeEEcCCCCC-CCCC----CHHHHHHHhcC---CCCCCCCC-cchHHHHHHHHHHcCC------CC
Q 014594           83 FEVLSIQLGRK-PEDIVKIDANEN-PYGP----PPEVREALGQL---KFPYIYPD-PESRRLRAALAKDSGL------ES  146 (422)
Q Consensus        83 ~~~~~~~~~~~-~~~~i~l~~~~~-~~~~----~~~v~~al~~~---~~~~~y~~-~~~~~lr~~la~~~~~------~~  146 (422)
                      +..+...+... .+++|+|+.|++ ++..    .+.+.+++.+.   .....|+. .|..++|++++++++.      ++
T Consensus        15 i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~   94 (401)
T 7aat_A           15 ILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKS   94 (401)
T ss_dssp             HHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHT
T ss_pred             hHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCcccccc
Confidence            33444444332 245899999986 4432    24677776653   13467854 5889999999999853      38


Q ss_pred             CCEEE--eCCHHHHHHHHHHHhc---CCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhc--C
Q 014594          147 DHILV--GCGADELIDLIMRCVL---DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER--E  217 (422)
Q Consensus       147 ~~i~~--~~G~~~al~~~~~~l~---~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~--~  217 (422)
                      ++|++  |+|+++++.++++.+.   ++||+|+++.|+|..+...++..|++++.++.+  +++++|++.+++.+.+  +
T Consensus        95 ~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~  174 (401)
T 7aat_A           95 GRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPE  174 (401)
T ss_dssp             TCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSCT
T ss_pred             CceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhCCC
Confidence            89977  9999999999887664   899999999999999999999999999999953  4678999988877753  5


Q ss_pred             CCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---h--h-hhhhcCCcEEEEccChhhhcc
Q 014594          218 KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---R--M-EWVKKHDNLIVLRTFSKRAGL  287 (422)
Q Consensus       218 ~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~--~-~~~~~~~~~i~~~S~SK~~~~  287 (422)
                      +++++++++||||||.+++.+++++|++.    |+++|+||+|.+|.+++.   .  . ......+++++++||||.||+
T Consensus       175 ~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~  254 (401)
T 7aat_A          175 KSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGL  254 (401)
T ss_dssp             TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCC
T ss_pred             CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCccccc
Confidence            78899999999999999999999888764    999999999999986542   1  1 122456889999999999999


Q ss_pred             ccccceeeec---CHH----HHHHHHHhcCC--CCCcHHHHHHHHHHccCC-------hHHH-HHHHHHHHHHHHHHHHc
Q 014594          288 AGLRVGYGAF---PLS----IIEYLWRAKQP--YNVSVAAEVAACAALQNP-------IYLE-VKEALIKERERLFKLLK  350 (422)
Q Consensus       288 ~G~r~G~i~~---~~~----~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~-------~~~~-~~~~~~~~~~~l~~~L~  350 (422)
                      +|+|+||+++   +++    +.+.+......  .+.+...+.++..+++++       ++++ .+++++++++++.+.|+
T Consensus       255 ~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~  334 (401)
T 7aat_A          255 YGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLK  334 (401)
T ss_dssp             GGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999886   666    44444443332  456677888888888764       2344 78899999999999999


Q ss_pred             cCC---CCc-ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014594          351 DVP---FLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH  420 (422)
Q Consensus       351 ~~~---~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~  420 (422)
                      +++   .+. ..|.+++|+|+.+    +.+.+...+.++||.+.++        +||+++  +.++++++.++|++
T Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gi~v~~~--------~Ris~~~~~~~~i~~~~~~l~~  398 (401)
T 7aat_A          335 KEGSSHNWQHITDQIGMFCFTGL----KPEQVERLTKEFSIYMTKD--------GRISVAGVASSNVGYLAHAIHQ  398 (401)
T ss_dssp             HTTCCSCCHHHHHCCSSEEECCC----CHHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHH
T ss_pred             hcCCCCCCceecCCcceEEecCC----CHHHHHHHHHhCCEeccCC--------CeEEeccCChhhHHHHHHHHHH
Confidence            874   233 3567788888766    3555544445889999764        599997  34557777777664

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=100.00  E-value=4e-38  Score=308.50  Aligned_cols=316  Identities=15%  Similarity=0.162  Sum_probs=249.6

Q ss_pred             CCCeEEcCCCCC-----CCCCCHHHHHHHhcC---CCCCCCCC-cchHHHHHHHHHHc-CC--CCCCEEE--eCCHHHHH
Q 014594           94 PEDIVKIDANEN-----PYGPPPEVREALGQL---KFPYIYPD-PESRRLRAALAKDS-GL--ESDHILV--GCGADELI  159 (422)
Q Consensus        94 ~~~~i~l~~~~~-----~~~~~~~v~~al~~~---~~~~~y~~-~~~~~lr~~la~~~-~~--~~~~i~~--~~G~~~al  159 (422)
                      +.++|+|+.|+.     +.++++.+.+++.+.   ...+.|+. .+..++|+++++++ +.  ++++|++  |+|+++++
T Consensus        25 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~v~~~~~~g~~~a~  104 (394)
T 2ay1_A           25 RQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDGLKSETTATLATVGGTGAL  104 (394)
T ss_dssp             CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHH
T ss_pred             CccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCCCCCcccEEEEecCCchhHH
Confidence            456899999983     135678999888763   13467854 57899999999997 55  6889999  99999999


Q ss_pred             HHHHHHhcC--CCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcC--CCeEEEEeCCCCccCc
Q 014594          160 DLIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVERE--KPKCIFLTSPNNPDGS  233 (422)
Q Consensus       160 ~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~  233 (422)
                      +.+++.+..  +||+|+++.|+|+.+...++..|++++.++.+  +++.+|++++++.+++.  +++++++++||||||.
T Consensus       105 ~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~  184 (394)
T 2ay1_A          105 RQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGA  184 (394)
T ss_dssp             HHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCC
T ss_pred             HHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCC
Confidence            999987754  99999999999999999999999999999964  56789999999998743  3667777999999999


Q ss_pred             CCCHHHHHHHHcC----CCeEEEccCCccccCCC--c--hhhhh-hcCCcEEEEccChhhhccccccceeeec---CHHH
Q 014594          234 IINDEDLLKILEM----PILVVLDEAYTEFSGLE--S--RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAF---PLSI  301 (422)
Q Consensus       234 ~~~~e~l~~i~~~----~~~li~Deay~~~~~~~--~--~~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~---~~~~  301 (422)
                      +++.+++++|++.    |+++|+||+|.+|.+++  .  ....+ ...+++++++||||.+|++|+|+||+++   ++++
T Consensus       185 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~  264 (394)
T 2ay1_A          185 NLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAAT  264 (394)
T ss_dssp             CCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHH
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHH
Confidence            9999988777664    99999999999988642  1  22222 2356899999999999999999999998   6765


Q ss_pred             HHHH----HHh-cCCC-CCcHHHHHHHHHHccCC-------hHHH-HHHHHHHHHHHHHHHHccCC---CCc-ccCCCce
Q 014594          302 IEYL----WRA-KQPY-NVSVAAEVAACAALQNP-------IYLE-VKEALIKERERLFKLLKDVP---FLN-PYPSYSN  363 (422)
Q Consensus       302 ~~~l----~~~-~~~~-~~~~~~~~aa~~~L~~~-------~~~~-~~~~~~~~~~~l~~~L~~~~---~~~-~~p~~~~  363 (422)
                      ++.+    ... ...+ +.+++++.++.++|++.       ++.+ ++++++++++++.+.|++++   .+. ..|.+++
T Consensus       265 ~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~  344 (394)
T 2ay1_A          265 RELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGM  344 (394)
T ss_dssp             HHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSS
T ss_pred             HHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceE
Confidence            4443    221 2344 45888999999999875       4566 88899999999999998865   233 3456789


Q ss_pred             EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhhh
Q 014594          364 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMHL  421 (422)
Q Consensus       364 f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~l  421 (422)
                      |+|++++    .+.+.+.|.++||.++++        +||+++  +.++++++.++++++
T Consensus       345 ~~~~~~~----~~~~~~~l~~~gi~v~~~--------~Ris~~~~~~~~i~~~~~~l~~~  392 (394)
T 2ay1_A          345 FSRLGAT----PEQVKRIKEEFGIYMVGD--------SRINIAGLNDNTIPILARAIIEV  392 (394)
T ss_dssp             EEECCCC----HHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             EEeeCCC----HHHHHHHHHhCCEEecCC--------CeEEeecCCHhhHHHHHHHHHHc
Confidence            9998774    456666777999999874        599998  677778888877654

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=100.00  E-value=1.1e-37  Score=307.31  Aligned_cols=316  Identities=14%  Similarity=0.176  Sum_probs=250.2

Q ss_pred             CCCCeEEcCCCCC--C---CCCCHHHHHHHhcCC----CCCCC-CCcchHHHHHHHHHHc-CC-----CCCCEEE--eCC
Q 014594           93 KPEDIVKIDANEN--P---YGPPPEVREALGQLK----FPYIY-PDPESRRLRAALAKDS-GL-----ESDHILV--GCG  154 (422)
Q Consensus        93 ~~~~~i~l~~~~~--~---~~~~~~v~~al~~~~----~~~~y-~~~~~~~lr~~la~~~-~~-----~~~~i~~--~~G  154 (422)
                      .+.++|+|+.|.+  +   ..+++.+.+++.+..    ..+.| +..+..++|+++++++ +.     ++++|++  |+|
T Consensus        28 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~g  107 (412)
T 1ajs_A           28 PDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLG  107 (412)
T ss_dssp             CCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEH
T ss_pred             CCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCC
Confidence            3467899999984  2   345688998887632    33568 6668899999999998 53     6789999  999


Q ss_pred             HHHHHHHHHH--HhcCCC-----CEEEEcCCCchhHHHHHHHcCCE-EEEecC--CCCCCCCHHHHHHHhhc--CCCeEE
Q 014594          155 ADELIDLIMR--CVLDPG-----DKIVDCPPTFTMYEFDAAVNGAA-VVKVPR--KSDFSLNVELIADAVER--EKPKCI  222 (422)
Q Consensus       155 ~~~al~~~~~--~l~~~g-----d~Vl~~~p~y~~~~~~~~~~g~~-~~~v~~--~~~~~~d~~~l~~~i~~--~~~~~i  222 (422)
                      ++++++++++  .++++|     |+|+++.|+|+.+...++..|++ ++.++.  ++++.+|++++++.+.+  .+++++
T Consensus       108 g~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v  187 (412)
T 1ajs_A          108 GTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFV  187 (412)
T ss_dssp             HHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEE
T ss_pred             cHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEE
Confidence            9999999965  456899     99999999999999999999999 999986  36678999999999874  367788


Q ss_pred             EEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC---c--hhhhh-hcCCcEEEEccChhhhccccccc
Q 014594          223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE---S--RMEWV-KKHDNLIVLRTFSKRAGLAGLRV  292 (422)
Q Consensus       223 ~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~---~--~~~~~-~~~~~~i~~~S~SK~~~~~G~r~  292 (422)
                      ++++||||||.+++.+++++|++.    |+++|+||+|.+|.+++   .  ....+ ...++++++.||||.+|++|+|+
T Consensus       188 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ri  267 (412)
T 1ajs_A          188 LHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERV  267 (412)
T ss_dssp             EESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCE
T ss_pred             EECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcce
Confidence            889999999999999988877764    99999999999998653   2  22222 24678999999999999889999


Q ss_pred             eeeec---CHH----HHHHHHH-hcCCCC-CcHHHHHHHHHHccCCh-------HHH-HHHHHHHHHHHHHHHHccCC--
Q 014594          293 GYGAF---PLS----IIEYLWR-AKQPYN-VSVAAEVAACAALQNPI-------YLE-VKEALIKERERLFKLLKDVP--  353 (422)
Q Consensus       293 G~i~~---~~~----~~~~l~~-~~~~~~-~~~~~~~aa~~~L~~~~-------~~~-~~~~~~~~~~~l~~~L~~~~--  353 (422)
                      ||+++   +++    +++.+.. ....++ .+.+++.++.++|++.+       +++ .+++++++++++.+.|++++  
T Consensus       268 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  347 (412)
T 1ajs_A          268 GNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTP  347 (412)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             EEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            99999   887    4454554 334454 58899999999998753       556 88899999999999999876  


Q ss_pred             -CCc-ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014594          354 -FLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH  420 (422)
Q Consensus       354 -~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~  420 (422)
                       .+. ..|.+++|+|+.++    .+.+.+.|.++||.++++        +||+++  +.++++++.++|++
T Consensus       348 ~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gv~v~~~--------~Ris~~~~~~~~i~~~~~~l~~  406 (412)
T 1ajs_A          348 GTWNHITDQIGMFSFTGLN----PKQVEYLINQKHIYLLPS--------GRINMCGLTTKNLDYVATSIHE  406 (412)
T ss_dssp             SCCHHHHHCCSSEEECCCC----HHHHHHHHHTTCEECCTT--------SEEEGGGCCTTTHHHHHHHHHH
T ss_pred             CCeeEEcCCCceEEEeCCC----HHHHHHHHHhCCEEecCC--------cEEEeeeCCHHHHHHHHHHHHH
Confidence             233 35678899997663    445555566899999874        599998  55666666665543

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=100.00  E-value=6.6e-38  Score=312.45  Aligned_cols=329  Identities=15%  Similarity=0.165  Sum_probs=251.0

Q ss_pred             CCCchHHHHHHhCCCCC-CeEEcCCCCC-CCC----CCHHHHHHHhcC-----CCCCCC-CCcchHHHHHHHHHHc-CCC
Q 014594           79 PILPFEVLSIQLGRKPE-DIVKIDANEN-PYG----PPPEVREALGQL-----KFPYIY-PDPESRRLRAALAKDS-GLE  145 (422)
Q Consensus        79 ~~~~~~~~~~~~~~~~~-~~i~l~~~~~-~~~----~~~~v~~al~~~-----~~~~~y-~~~~~~~lr~~la~~~-~~~  145 (422)
                      +.+++..+..++...+. ++|+|+.|.. ++.    ..+.+.+++.++     .....| +..|..++|+++++++ |.+
T Consensus        32 ~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~g~~  111 (448)
T 3meb_A           32 PPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLMFGKD  111 (448)
T ss_dssp             CCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHHHCTT
T ss_pred             CCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHhcCCC
Confidence            34445555555554433 4799999986 543    346777774332     233567 4468999999999997 876


Q ss_pred             -----CCCEEE--eCCHHHHHHH--HHHHhcCCCCEEEEcCCCchhHHHHHH----HcCCEEEEecC-CC--CCCCCHHH
Q 014594          146 -----SDHILV--GCGADELIDL--IMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPR-KS--DFSLNVEL  209 (422)
Q Consensus       146 -----~~~i~~--~~G~~~al~~--~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~-~~--~~~~d~~~  209 (422)
                           +++|++  |+|+++++++  .+..++.+||+|+++.|+|..+...++    ..|++++.++. +.  ++.+|+++
T Consensus       112 ~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~  191 (448)
T 3meb_A          112 SKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSN  191 (448)
T ss_dssp             CHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHH
T ss_pred             ccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHH
Confidence                 689999  9999999988  455678899999999999999999999    89999999996 44  48999999


Q ss_pred             HHHHhhc--CCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc-----hhh-hhhcCCcEEE
Q 014594          210 IADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-----RME-WVKKHDNLIV  277 (422)
Q Consensus       210 l~~~i~~--~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~-----~~~-~~~~~~~~i~  277 (422)
                      +++.+++  .+++++++++||||||.+++.+++++|++.    |+++|+||+|.+|.+++.     ... .....+++++
T Consensus       192 l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~  271 (448)
T 3meb_A          192 TKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLV  271 (448)
T ss_dssp             HHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEE
T ss_pred             HHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEE
Confidence            9999975  457788889999999999999998777664    999999999999986541     122 2245678999


Q ss_pred             EccChhhhccccccceee--ec--------C-H----HHHHHHHHhc-C-CCCCcHHHHHHHHHHccCCh----H---HH
Q 014594          278 LRTFSKRAGLAGLRVGYG--AF--------P-L----SIIEYLWRAK-Q-PYNVSVAAEVAACAALQNPI----Y---LE  333 (422)
Q Consensus       278 ~~S~SK~~~~~G~r~G~i--~~--------~-~----~~~~~l~~~~-~-~~~~~~~~~~aa~~~L~~~~----~---~~  333 (422)
                      ++||||.||++|+|+||+  ++        + +    ++++.+.... . ..+++.+++.++..+|.+.+    |   ++
T Consensus       272 ~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~  351 (448)
T 3meb_A          272 AQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVK  351 (448)
T ss_dssp             EEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred             EecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHHHHH
Confidence            999999999999999998  65        3 4    5666665533 2 24678899999999998852    3   45


Q ss_pred             -HHHHHHHHHHHHHHHHccC--CC------C-cccCCCceEEEEEeCCCCCHHHHHHHH-HhCCcEEEeCCCCCCCCeEE
Q 014594          334 -VKEALIKERERLFKLLKDV--PF------L-NPYPSYSNFILCEVTSGMDAKKLKDDL-AKMGVMIRHYNNKELKGYVR  402 (422)
Q Consensus       334 -~~~~~~~~~~~l~~~L~~~--~~------~-~~~p~~~~f~~~~~~~~~~~~~~~~~L-~~~gI~v~~~~~~~~~~~iR  402 (422)
                       ++++++++++++.+.|+++  +.      . ...|..++|+|+.++    . ++...| .++||.+.+|.       .|
T Consensus       352 ~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~-~~~~~ll~~~gV~v~~G~-------gR  419 (448)
T 3meb_A          352 EMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLT----P-EHVDYLKEKWSIYLVKAG-------GR  419 (448)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCCC----H-HHHHHHHHHHCEEECSGG-------GE
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCCC----H-HHHHHHHHhCCEEEeCCC-------cE
Confidence             7889999999999999887  22      2 345778899997763    3 455555 58899999875       29


Q ss_pred             EEecC--hhhHHHHHHHHh
Q 014594          403 VSVGK--PEHTDALMECLM  419 (422)
Q Consensus       403 is~~~--~~~~~~l~~al~  419 (422)
                      ||++.  .++++++.++|+
T Consensus       420 is~a~~~~~~i~~~~~~l~  438 (448)
T 3meb_A          420 MSMCGLTESNCDYVAEAIH  438 (448)
T ss_dssp             EEGGGCCTTTHHHHHHHHH
T ss_pred             EEEecCCHHHHHHHHHHHH
Confidence            99974  444555555544

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=100.00  E-value=1.6e-38  Score=313.61  Aligned_cols=321  Identities=17%  Similarity=0.185  Sum_probs=243.1

Q ss_pred             CCeEEcCCCCCCCCCC--HHHHHHHhcC-CC------CCCCCC-cchHHHHHHHHHHc------CCCCCCEEEeCCHHHH
Q 014594           95 EDIVKIDANENPYGPP--PEVREALGQL-KF------PYIYPD-PESRRLRAALAKDS------GLESDHILVGCGADEL  158 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~--~~v~~al~~~-~~------~~~y~~-~~~~~lr~~la~~~------~~~~~~i~~~~G~~~a  158 (422)
                      .++|+|+.+.++..++  +.+.+++.+. ..      ...|+. .|..+||+++++++      ++++++|++|+|++++
T Consensus        31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~a  110 (417)
T 3g7q_A           31 PGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSA  110 (417)
T ss_dssp             -CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred             CCceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHH
Confidence            5689999998877433  4556666542 11      136754 47899999999997      5788999999999999


Q ss_pred             HHHHHHHhcCCCC-----EEEEc-CCCchhHHHHHHH------cCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEe
Q 014594          159 IDLIMRCVLDPGD-----KIVDC-PPTFTMYEFDAAV------NGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLT  225 (422)
Q Consensus       159 l~~~~~~l~~~gd-----~Vl~~-~p~y~~~~~~~~~------~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~  225 (422)
                      +++++++++++||     +|+++ .|+|+.+...+..      .+..+..++.+ .++.+|+++++  +. +++++++++
T Consensus       111 l~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~-~~~~~v~~~  187 (417)
T 3g7q_A          111 FFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLH--IG-EETGMICVS  187 (417)
T ss_dssp             HHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGGCC--CC-TTEEEEEEE
T ss_pred             HHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcccccccCHHHhc--cc-cCceEEEEC
Confidence            9999999999987     89997 9999988766532      23455556543 24678999988  54 689999999


Q ss_pred             CCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCchhh-hhhcCCcEEEEccChhhhccccccceeeecCHH
Q 014594          226 SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (422)
Q Consensus       226 ~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~  300 (422)
                      +||||||.+++.+++++|++.    |+++|+||+|..+........ .....++++++.|||| ++++|+|+||++++++
T Consensus       188 ~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK-~~~~G~r~G~~~~~~~  266 (417)
T 3g7q_A          188 RPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLSK-LGLPGSRCGIIIANDK  266 (417)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESGG-GTCTTSCCEEEECCHH
T ss_pred             CCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccccCCCCCEEEEEechh-ccCCCcceEEEEeCHH
Confidence            999999999998777777653    999999999986432111111 1123578999999999 6889999999999999


Q ss_pred             HHHHHHHhcC--CCCCcHHHHHHHHHHccCChHHH-----HHHHHHHHHHHHHHHHcc-CCC--Cc-ccCCCceEEEEEe
Q 014594          301 IIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-----VKEALIKERERLFKLLKD-VPF--LN-PYPSYSNFILCEV  369 (422)
Q Consensus       301 ~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-----~~~~~~~~~~~l~~~L~~-~~~--~~-~~p~~~~f~~~~~  369 (422)
                      +++.+.....  .++.+++.+.++.+++++.++.+     +++.++++++.+.+.|++ ++.  +. ..|.+++|+|+++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~  346 (417)
T 3g7q_A          267 TITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWF  346 (417)
T ss_dssp             HHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEEC
T ss_pred             HHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEc
Confidence            9998877654  35678899999999998876654     456778888888888876 442  33 3578899999999


Q ss_pred             CC-CCCHHHHHHHHHhCCcEEEeCCCCCC---------CCeEEEEecChhhHHHHHHHHhhh
Q 014594          370 TS-GMDAKKLKDDLAKMGVMIRHYNNKEL---------KGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       370 ~~-~~~~~~~~~~L~~~gI~v~~~~~~~~---------~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +. +.+.+++.+.|.++||.++++..+..         ++++||+++.+  .+++.+++++|
T Consensus       347 ~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~~--~~~i~~~~~~l  406 (417)
T 3g7q_A          347 KDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVPE--PDKIEAGVKIL  406 (417)
T ss_dssp             TTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCSC--HHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecCC--HHHHHHHHHHH
Confidence            86 67899999999999999998765211         57999999872  35677666654

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=100.00  E-value=5.9e-38  Score=316.41  Aligned_cols=296  Identities=19%  Similarity=0.242  Sum_probs=232.1

Q ss_pred             CCCCC-cchHHHHHHHHHHc-----CC--CCCCEEEeCCHHHHHHHHHHHhcCCCC----EEEEcCCCchhHHHHHHHcC
Q 014594          124 YIYPD-PESRRLRAALAKDS-----GL--ESDHILVGCGADELIDLIMRCVLDPGD----KIVDCPPTFTMYEFDAAVNG  191 (422)
Q Consensus       124 ~~y~~-~~~~~lr~~la~~~-----~~--~~~~i~~~~G~~~al~~~~~~l~~~gd----~Vl~~~p~y~~~~~~~~~~g  191 (422)
                      ..|++ .|..++|+++++++     |+  ++++|++|+|+++++..++++++++||    .|+++.|+|+.|...++..|
T Consensus       123 ~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~~g  202 (498)
T 3ihj_A          123 GSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELD  202 (498)
T ss_dssp             -----CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHHTT
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHHcC
Confidence            56855 47899999999986     44  688999999999999999999999875    99999999999999999999


Q ss_pred             CEEEEecCC--CCCCCCHHHHHHHhhcC----CCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccC
Q 014594          192 AAVVKVPRK--SDFSLNVELIADAVERE----KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSG  261 (422)
Q Consensus       192 ~~~~~v~~~--~~~~~d~~~l~~~i~~~----~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~  261 (422)
                      ++++.++.+  .+|++|+++|++.+++.    ++++|+++|||||||.+++.+++++|++.    ++++|+||+|.++.+
T Consensus       203 ~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~  282 (498)
T 3ihj_A          203 AIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVY  282 (498)
T ss_dssp             CEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBC
T ss_pred             CEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCcccccc
Confidence            999999854  35799999999999742    58999999999999999999998888764    999999999999876


Q ss_pred             CCc----hhhh-hh-------cCCcEEEEccChhhh-ccccccceeee---cCHHHHHHHHHhcCC-CCCcHHHHHHHHH
Q 014594          262 LES----RMEW-VK-------KHDNLIVLRTFSKRA-GLAGLRVGYGA---FPLSIIEYLWRAKQP-YNVSVAAEVAACA  324 (422)
Q Consensus       262 ~~~----~~~~-~~-------~~~~~i~~~S~SK~~-~~~G~r~G~i~---~~~~~~~~l~~~~~~-~~~~~~~~~aa~~  324 (422)
                      ++.    .... ..       ...++++++||||.| |++|+|+||++   .++++++.+...... ++.+.+.|.++..
T Consensus       283 ~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~~~~~~~~~q~a~~~  362 (498)
T 3ihj_A          283 SPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDI  362 (498)
T ss_dssp             CTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHHSCCCCHHHHHHHHH
T ss_pred             CCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHhccCCCCHHHHHHHHH
Confidence            431    1111 11       224589999999999 78999999998   689999988766443 5678899999999


Q ss_pred             HccCC--------hHH---H-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC-----------CCCHHHH-H
Q 014594          325 ALQNP--------IYL---E-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-----------GMDAKKL-K  379 (422)
Q Consensus       325 ~L~~~--------~~~---~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~-----------~~~~~~~-~  379 (422)
                      +++.+        .|.   . ++++++++++.+.+.|++++++.+ .|.+++|+|+++..           +.+.+++ +
T Consensus       363 ~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~  442 (498)
T 3ihj_A          363 VVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYC  442 (498)
T ss_dssp             HTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHH
T ss_pred             HhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHH
Confidence            99751        233   3 668899999999999999855554 56778889977641           3455554 4


Q ss_pred             -HHHHhCCcEEEeCCCCC---CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          380 -DDLAKMGVMIRHYNNKE---LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       380 -~~L~~~gI~v~~~~~~~---~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                       +.|.++||.+++|..+.   ..+++|++++.++  +++.+++++|
T Consensus       443 ~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~~~~--e~l~~~i~~L  486 (498)
T 3ihj_A          443 MKLLEETGICVVPGSGFGQREGTYHFRMTILPPV--EKLKTVLQKV  486 (498)
T ss_dssp             HHHHHHHCBCCEEGGGTCCCTTCCBEEEECCSCH--HHHHHHHHHH
T ss_pred             HHHHHHCCEEEEeCcccCCCCCCCEEEEEeCCCH--HHHHHHHHHH
Confidence             44558999999987643   3569999997432  4455555544

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=100.00  E-value=1.4e-37  Score=306.61  Aligned_cols=317  Identities=16%  Similarity=0.184  Sum_probs=247.0

Q ss_pred             CCCCeEEcCCCCC-CC----CCCHHHHHHHhc-CC---CCCCC-CCcchHHHHHHHHHHc-C-----CCCCCEEE--eCC
Q 014594           93 KPEDIVKIDANEN-PY----GPPPEVREALGQ-LK---FPYIY-PDPESRRLRAALAKDS-G-----LESDHILV--GCG  154 (422)
Q Consensus        93 ~~~~~i~l~~~~~-~~----~~~~~v~~al~~-~~---~~~~y-~~~~~~~lr~~la~~~-~-----~~~~~i~~--~~G  154 (422)
                      .+.++|+|+.|.. +.    .+++.+.+++.+ ..   ..+.| +..+..++|+++++++ +     +++++|++  |+|
T Consensus        27 ~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g  106 (412)
T 1yaa_A           27 QRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLS  106 (412)
T ss_dssp             CCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEH
T ss_pred             CCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccc
Confidence            3467899999874 22    467889988876 42   23567 5568899999999998 3     35789999  999


Q ss_pred             HHHHHHHHH--HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC-C-CCCCCCHHHHHHHhhcCC--CeEEEEeCCC
Q 014594          155 ADELIDLIM--RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-K-SDFSLNVELIADAVEREK--PKCIFLTSPN  228 (422)
Q Consensus       155 ~~~al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~i~~~~--~~~i~l~~p~  228 (422)
                      +++++++++  ..++++||+|+++.|+|..+...++..|++++.++. + +++.+|++++++.+++.+  +.++++++||
T Consensus       107 ~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~  186 (412)
T 1yaa_A          107 GTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAH  186 (412)
T ss_dssp             HHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSC
T ss_pred             hHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCC
Confidence            999999984  334579999999999999999999999999999986 3 367899999999987432  3445558999


Q ss_pred             CccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC---c--hhhhh-hcCC---cEEEEccChhhhccccccceee
Q 014594          229 NPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE---S--RMEWV-KKHD---NLIVLRTFSKRAGLAGLRVGYG  295 (422)
Q Consensus       229 NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~---~--~~~~~-~~~~---~~i~~~S~SK~~~~~G~r~G~i  295 (422)
                      ||||.+++.+++++|++.    |+++|+||+|.+|.+++   .  ....+ ...+   ++++++||||.+|++|+|+||+
T Consensus       187 nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~  266 (412)
T 1yaa_A          187 NPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCF  266 (412)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEE
T ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEE
Confidence            999999999988887653    99999999999987653   2  22222 2344   8999999999999889999999


Q ss_pred             e--c-----CHH----HHHHHHH-hcCCC-CCcHHHHHHHHHHccCCh-------HHH-HHHHHHHHHHHHHHHHccCC-
Q 014594          296 A--F-----PLS----IIEYLWR-AKQPY-NVSVAAEVAACAALQNPI-------YLE-VKEALIKERERLFKLLKDVP-  353 (422)
Q Consensus       296 ~--~-----~~~----~~~~l~~-~~~~~-~~~~~~~~aa~~~L~~~~-------~~~-~~~~~~~~~~~l~~~L~~~~-  353 (422)
                      +  +     +++    +++.+.. ....+ +.+.+.+.++.++|++..       +++ .+++++++++++.+.|++++ 
T Consensus       267 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  346 (412)
T 1yaa_A          267 HLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGT  346 (412)
T ss_dssp             EEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            8  7     566    7777776 33344 558899999999998863       566 88899999999999999876 


Q ss_pred             --CCc-ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhhh
Q 014594          354 --FLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMHL  421 (422)
Q Consensus       354 --~~~-~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~l  421 (422)
                        .+. ..|.+++|+|+.+    +.+.+.+.+.++||.+.+        ++||+++  +.++++++.++|+++
T Consensus       347 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gi~v~~--------~~Ris~~~~~~~~i~~~~~~l~~~  407 (412)
T 1yaa_A          347 PGNWDHIVNQCGMFSFTGL----TPQMVKRLEETHAVYLVA--------SGRASIAGLNQGNVEYVAKAIDEV  407 (412)
T ss_dssp             SSCCTHHHHCCSSEEECCC----CHHHHHHHHHHHCEECCT--------TSEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             CCCeeeeccCceEEEeeCC----CHHHHHHHHHhCCEEecc--------CcEEEEccCCHhHHHHHHHHHHHH
Confidence              233 3566778888755    456665555589999986        4799998  666777777777653

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=100.00  E-value=1.5e-38  Score=323.53  Aligned_cols=319  Identities=16%  Similarity=0.216  Sum_probs=239.0

Q ss_pred             eEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCc-chHHHHHHHHHHc-------CC---CCCCEEEeCCHHHHHHHHHHH
Q 014594           97 IVKIDANENPYGPPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDS-------GL---ESDHILVGCGADELIDLIMRC  165 (422)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~-~~~~lr~~la~~~-------~~---~~~~i~~~~G~~~al~~~~~~  165 (422)
                      +|+|+.|++.++ ++.+.+++.+......||++ |..++|+++++.+       ++   ++++|++|+|+++++..++++
T Consensus       106 ~i~l~~g~~~~~-~~~~~~al~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~  184 (546)
T 2zy4_A          106 SLSYVRDQLGLD-PAAFLHEMVDGILGCNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFES  184 (546)
T ss_dssp             HHHHHHHTSCCC-HHHHHHHHHHHHHTCSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHH
T ss_pred             hhecccCCCCCC-ChHHHHHHHHhhhcCCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHHHH
Confidence            688988888874 46666666552223679776 7888999987754       22   357999999999999999987


Q ss_pred             -----hcCCCCEEEEcCCCchhHHHHHHH--cCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594          166 -----VLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (422)
Q Consensus       166 -----l~~~gd~Vl~~~p~y~~~~~~~~~--~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (422)
                           ++++||+|++++|+|+.|...+..  .|++++.++.+  .+|.+|++++++.+. .++++|++||||||||.+++
T Consensus       185 l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~v~l~~p~NPtG~~~~  263 (546)
T 2zy4_A          185 LKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKD-PAIKIFFCVNPSNPPSVKMD  263 (546)
T ss_dssp             HHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGS-TTEEEEEEESSCSSSCBCCC
T ss_pred             hhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhC-CCCeEEEEECCCCCCCccCC
Confidence                 578999999999999999887665  46889998853  357799999998875 68999999999999999999


Q ss_pred             HHHHHHHH-----cC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHH-HHHHHHHhc
Q 014594          237 DEDLLKIL-----EM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLWRAK  309 (422)
Q Consensus       237 ~e~l~~i~-----~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~-~~~~l~~~~  309 (422)
                      .+++++|+     +. +++||+||+|.+|.++...+... ..+++++++||||.+|++|+|+||++++++ +++.+....
T Consensus       264 ~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~-~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~  342 (546)
T 2zy4_A          264 QRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAI-CPENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKL  342 (546)
T ss_dssp             HHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHH-CGGGEEEEEESTTTTTCGGGCEEEEEEESSCHHHHHHHTS
T ss_pred             HHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHh-CCCCEEEEEeCccccCCCCcceEEEEECCHHHHHHHHhhc
Confidence            98887664     33 89999999999987543222222 246899999999999999999999999875 777763211


Q ss_pred             --------------------------------------CCCCCcHHHHHHH-----HHHccC-ChHHH-HHHHHHHHHHH
Q 014594          310 --------------------------------------QPYNVSVAAEVAA-----CAALQN-PIYLE-VKEALIKERER  344 (422)
Q Consensus       310 --------------------------------------~~~~~~~~~~~aa-----~~~L~~-~~~~~-~~~~~~~~~~~  344 (422)
                                                            ...+++.+.|.++     .+++++ +.|.+ +++.++++++.
T Consensus       343 p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~~~~~~~~~r~~~~~r~~~  422 (546)
T 2zy4_A          343 QESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDEADEYKHTLKQLIRRRETT  422 (546)
T ss_dssp             CHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred             chhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence                                                  1135677777763     344554 56777 88899999999


Q ss_pred             HHHHHccCCCCcccCCCceEEEEEeCC----------------CCCH-HHHHHHHHhCCcEEEeCCCCC-CCCeEEEEec
Q 014594          345 LFKLLKDVPFLNPYPSYSNFILCEVTS----------------GMDA-KKLKDDLAKMGVMIRHYNNKE-LKGYVRVSVG  406 (422)
Q Consensus       345 l~~~L~~~~~~~~~p~~~~f~~~~~~~----------------~~~~-~~~~~~L~~~gI~v~~~~~~~-~~~~iRis~~  406 (422)
                      +.+.|. +++....+.+++|+|++++.                +.+. +.+.+.|.++||.++||..++ .++++||+++
T Consensus       423 l~~~L~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~  501 (546)
T 2zy4_A          423 LYRELG-MPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLA  501 (546)
T ss_dssp             HHGGGT-SSCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEESS
T ss_pred             HHHhcC-CCcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEEEeCccccCCCCCeEEEEec
Confidence            999996 55322345677889999852                1223 345666679999999998753 4679999998


Q ss_pred             Ch--hhHHHHHHHHh
Q 014594          407 KP--EHTDALMECLM  419 (422)
Q Consensus       407 ~~--~~~~~l~~al~  419 (422)
                      ..  ++++++.++|+
T Consensus       502 ~~~~e~i~~~~~~l~  516 (546)
T 2zy4_A          502 NLNEYEYAAIGRALR  516 (546)
T ss_dssp             SSCHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHH
Confidence            63  33334444443

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=100.00  E-value=2.9e-39  Score=319.96  Aligned_cols=307  Identities=16%  Similarity=0.120  Sum_probs=245.7

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhc-C-CC-CCC--CCCc--c---hHHHHHHHHHHcC------CCCCCEEEeCCHHH
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQ-L-KF-PYI--YPDP--E---SRRLRAALAKDSG------LESDHILVGCGADE  157 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~-~~-~~~--y~~~--~---~~~lr~~la~~~~------~~~~~i~~~~G~~~  157 (422)
                      +..+|+|+.|++++++++.+.+++.+ + .. ...  |++.  |   ..+||++++++++      +++++|++|+|+++
T Consensus        55 ~~~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~  134 (427)
T 2hox_A           55 QGCSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQ  134 (427)
T ss_dssp             TTCCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHH
T ss_pred             CCceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHH
Confidence            35679999999999877788777765 3 12 233  8654  6   7999999999985      67899999999999


Q ss_pred             HHHHHHHHh--------cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCC
Q 014594          158 LIDLIMRCV--------LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN  229 (422)
Q Consensus       158 al~~~~~~l--------~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~N  229 (422)
                      ++.+++.++        +++||.|+++.|+|..|...++..|++++.      +.+|++.|++.++ .++|+|+++||||
T Consensus       135 al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~------~~~d~~~l~~~~~-~~~k~v~l~~p~N  207 (427)
T 2hox_A          135 LIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYV------WAGNAANYVNVSN-PEQYIEMVTSPNN  207 (427)
T ss_dssp             HHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEE------EEEEGGGGTTCSC-GGGEEEEEESSCT
T ss_pred             HHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeee------ecCCHHHHHHhhc-CCceEEEEcCCCC
Confidence            999999999        899999999999999999999999988764      3467888888886 5789999999999


Q ss_pred             ccCcCCCHHHHHHHHcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeec-CHHHHHHHHHh
Q 014594          230 PDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRA  308 (422)
Q Consensus       230 PtG~~~~~e~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~~~l~~~  308 (422)
                      |||.+++ +.    ++ ++..+.|++|.+   .......+. .+++++++||||.+|++|+|+||+++ ++++++.+.+.
T Consensus       208 PtG~~~~-~~----l~-~~~~i~d~~~~~---~~~s~~~~~-~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~  277 (427)
T 2hox_A          208 PEGLLRH-AV----IK-GCKSIYDMVYYW---PHYTPIKYK-ADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNY  277 (427)
T ss_dssp             TTCCCCC-CS----ST-TCEEEEECTTCS---TTTSCCCSC-BCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHH
T ss_pred             CcccccH-HH----Hc-CCCEEEeecccC---CCCCccccC-CCceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHH
Confidence            9999999 42    23 667888888763   111111121 57889999999999999999999999 58999998876


Q ss_pred             cCC--CCCcHHHHHHHHHHccCC------------hHHH-HHHHHHHHHHHHHHHHccCCCCcc---------------c
Q 014594          309 KQP--YNVSVAAEVAACAALQNP------------IYLE-VKEALIKERERLFKLLKDVPFLNP---------------Y  358 (422)
Q Consensus       309 ~~~--~~~~~~~~~aa~~~L~~~------------~~~~-~~~~~~~~~~~l~~~L~~~~~~~~---------------~  358 (422)
                      ...  ++++.+.|.++..+|++.            ++++ .+++++++++++.+.|++++.+.+               .
T Consensus       278 ~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~  357 (427)
T 2hox_A          278 MTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMR  357 (427)
T ss_dssp             HHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEE
T ss_pred             HHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccC
Confidence            653  678999999998888752            3555 788999999999999998743332               3


Q ss_pred             CCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCC-CCeEEEEecChhhHHHHHHHHhhh
Q 014594          359 PSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKEL-KGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       359 p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~~-~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      |.+++|+|++++.  +..++++.|+ ++||.+++|..++. ++++|||++..+  ++|.+++++|
T Consensus       358 p~~g~f~~~~~~~--~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~~~--e~l~~~l~~l  418 (427)
T 2hox_A          358 PPSPSYAWVKCEW--EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQ--DDFDQLMYYL  418 (427)
T ss_dssp             CCCCSEEEEEECS--GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSSCH--HHHHHHHHHH
T ss_pred             CCCceEEEEECCC--cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence            5568999999974  4566777775 89999999877543 789999999743  5688777765

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=100.00  E-value=1.8e-37  Score=313.26  Aligned_cols=295  Identities=17%  Similarity=0.285  Sum_probs=233.3

Q ss_pred             CCCCC-cchHHHHHHHHHHcC------CCCCCEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCchhHHHHHHHcCCEEE
Q 014594          124 YIYPD-PESRRLRAALAKDSG------LESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFDAAVNGAAVV  195 (422)
Q Consensus       124 ~~y~~-~~~~~lr~~la~~~~------~~~~~i~~~~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~  195 (422)
                      ..|+. .|..++|++++++++      +++++|++|+|+++++..++++++ ++||.|+++.|+|..+...++..|++++
T Consensus       128 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~  207 (500)
T 3tcm_A          128 GAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALV  207 (500)
T ss_dssp             SSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHHTTCEEE
T ss_pred             CCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHHcCCEEE
Confidence            56854 578999999999873      678999999999999999999998 8999999999999999999999999999


Q ss_pred             EecCCC--CCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCC-
Q 014594          196 KVPRKS--DFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-  263 (422)
Q Consensus       196 ~v~~~~--~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~-  263 (422)
                      .++.++  +|++|+++|++.+++.     ++++|+++||+||||.+++.+++.+|++.    |+++|+||+|.++.+++ 
T Consensus       208 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~  287 (500)
T 3tcm_A          208 PYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDN  287 (500)
T ss_dssp             EEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTT
T ss_pred             EEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCC
Confidence            998543  5799999999999742     78999999999999999999999999654    99999999999977632 


Q ss_pred             -c--hhh----hh---hcCCcEEEEccChhhh-ccccccceeeec---CHHHHHHHHHhcC-CCCCcHHHHHHHHHHccC
Q 014594          264 -S--RME----WV---KKHDNLIVLRTFSKRA-GLAGLRVGYGAF---PLSIIEYLWRAKQ-PYNVSVAAEVAACAALQN  328 (422)
Q Consensus       264 -~--~~~----~~---~~~~~~i~~~S~SK~~-~~~G~r~G~i~~---~~~~~~~l~~~~~-~~~~~~~~~~aa~~~L~~  328 (422)
                       .  ...    .+   ....++++++||||.| |++|+|+||+++   ++++++.+.+... .++.+.+.|.++..+++.
T Consensus       288 ~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~  367 (500)
T 3tcm_A          288 KKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNP  367 (500)
T ss_dssp             CCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHHHTTCCCCHHHHHHHHHHHSC
T ss_pred             CCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHHhcccCCCHHHHHHHHHHhcC
Confidence             1  111    12   2234689999999998 899999999998   8999998876654 467899999999999974


Q ss_pred             Ch--------H---HH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC-----------CCCHH-HHH-HHH
Q 014594          329 PI--------Y---LE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-----------GMDAK-KLK-DDL  382 (422)
Q Consensus       329 ~~--------~---~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~-----------~~~~~-~~~-~~L  382 (422)
                      .+        |   .+ ++++++++++.+.+.|++++++.+ .|.+++|+|+++..           +...+ .++ +.|
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll  447 (500)
T 3tcm_A          368 PKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLL  447 (500)
T ss_dssp             CCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHH
Confidence            21        3   33 778899999999999999855554 56778889966531           11122 233 445


Q ss_pred             HhCCcEEEeCCCCC---CCCeEEEEecChh-hHHHHHHHH
Q 014594          383 AKMGVMIRHYNNKE---LKGYVRVSVGKPE-HTDALMECL  418 (422)
Q Consensus       383 ~~~gI~v~~~~~~~---~~~~iRis~~~~~-~~~~l~~al  418 (422)
                      .++||.++++..+.   ..+++||+++.++ +++++.++|
T Consensus       448 ~~~gI~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~i~~l  487 (500)
T 3tcm_A          448 ESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVISRF  487 (500)
T ss_dssp             HHHCEECEESTTTCCCTTCCBEEEESCSCTTTHHHHHHHH
T ss_pred             HHCCEEEEeCcccCCCCCCCEEEEEECCCHHHHHHHHHHH
Confidence            58899999988743   3568999998433 333333333

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=100.00  E-value=2.2e-37  Score=303.96  Aligned_cols=337  Identities=15%  Similarity=0.123  Sum_probs=249.7

Q ss_pred             HhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCC---CC--CCCCHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHH
Q 014594           70 HLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANE---NP--YGPPPEVREALGQL---KFPYIY-PDPESRRLRAALAK  140 (422)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---~~--~~~~~~v~~al~~~---~~~~~y-~~~~~~~lr~~la~  140 (422)
                      .+.++... |.+++..+++++..++.+.|||+.|.   ..  .+..|.|++|...+   ...+.| |..|.++||+++++
T Consensus        20 ~~~~v~~~-p~d~i~~l~~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~   98 (420)
T 4h51_A           20 RWQKIQAQ-APDVIFDLAKRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVK   98 (420)
T ss_dssp             HHHTCCCC-CCCHHHHHHHHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHH
T ss_pred             HHhCCCCC-CCChHHHHHHHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHH
Confidence            44555554 56677778777776666789999983   21  23457888876542   334668 77799999999999


Q ss_pred             Hc-C--CCCCC--EEEeCCHHHHHHHHHHH----hcCCCCEEEEcCCCchhHHHHHHHcCCEEEE-ec--CCCCCCCCHH
Q 014594          141 DS-G--LESDH--ILVGCGADELIDLIMRC----VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK-VP--RKSDFSLNVE  208 (422)
Q Consensus       141 ~~-~--~~~~~--i~~~~G~~~al~~~~~~----l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~-v~--~~~~~~~d~~  208 (422)
                      ++ |  .+.+.  .+.|.|++.++...+..    +++|||+|++++|+|+.|...++..|++.+. ++  .+.++.+|.+
T Consensus        99 ~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d~~  178 (420)
T 4h51_A           99 IIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFE  178 (420)
T ss_dssp             HHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEECHH
T ss_pred             HhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeeccccccccCCCHH
Confidence            85 3  23333  45588888887666554    4579999999999999999999999987543 33  2355778999


Q ss_pred             HHHHHhhc--CCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCch------hhhhhcCCcEE
Q 014594          209 LIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR------MEWVKKHDNLI  276 (422)
Q Consensus       209 ~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~------~~~~~~~~~~i  276 (422)
                      .+.+.+..  ++++++++++||||||.+++.+++++|++.    ++++|+||+|.+|.+++..      ....+..++++
T Consensus       179 ~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i  258 (420)
T 4h51_A          179 GMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVL  258 (420)
T ss_dssp             HHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCE
T ss_pred             HHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEE
Confidence            98887753  567788888999999999999999999885    9999999999999875421      12234567899


Q ss_pred             EEccChhhhccccccceeeecCHHHHHH-------HHHhc--CCCCCcHHHHHHHHHHccCCh----H---HH-HHHHHH
Q 014594          277 VLRTFSKRAGLAGLRVGYGAFPLSIIEY-------LWRAK--QPYNVSVAAEVAACAALQNPI----Y---LE-VKEALI  339 (422)
Q Consensus       277 ~~~S~SK~~~~~G~r~G~i~~~~~~~~~-------l~~~~--~~~~~~~~~~~aa~~~L~~~~----~---~~-~~~~~~  339 (422)
                      ++.||||.|+++|+|+||++++.+..+.       +....  ...+++..+|.++..+|.++.    |   ++ ++++++
T Consensus       259 ~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~  338 (420)
T 4h51_A          259 LAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIR  338 (420)
T ss_dssp             EEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999885433322       22222  235678889999999998852    3   33 788899


Q ss_pred             HHHHHHHHHHccCC----CCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHH
Q 014594          340 KERERLFKLLKDVP----FLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDA  413 (422)
Q Consensus       340 ~~~~~l~~~L~~~~----~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~  413 (422)
                      ++|+.+.+.|++++    |..+.++.|+|.|+.+    +.+. ++.|+++||++.+++        |||++  +.++++.
T Consensus       339 ~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gl----s~e~-v~~L~e~~Vy~~~~g--------Ris~Agl~~~ni~~  405 (420)
T 4h51_A          339 TMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGL----SKAQ-CEYCQNHNIFITVSG--------RANMAGLTHETALM  405 (420)
T ss_dssp             HHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCC----CHHH-HHHHHHTTEECCTTC--------EEEGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCeecCCCceEEecCc----CHHH-HHHHHhCCEEEcCCC--------EEEeccCCHHHHHH
Confidence            99999999998865    3335678899998655    4444 577889999988754        99997  4556666


Q ss_pred             HHHHHhh
Q 014594          414 LMECLMH  420 (422)
Q Consensus       414 l~~al~~  420 (422)
                      +.++|..
T Consensus       406 ~a~aI~~  412 (420)
T 4h51_A          406 LAQTIND  412 (420)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            6666643

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=100.00  E-value=2.5e-38  Score=321.59  Aligned_cols=321  Identities=19%  Similarity=0.200  Sum_probs=246.4

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCC-CCcchHHHHHHHHHHc-----C-CC---CCCEEEeCCHHHHHHHHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQ-LKFPYIY-PDPESRRLRAALAKDS-----G-LE---SDHILVGCGADELIDLIMR  164 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y-~~~~~~~lr~~la~~~-----~-~~---~~~i~~~~G~~~al~~~~~  164 (422)
                      ++++|+.|.+.++ ++++++++.+ +.....| |..|..++|+++++++     + +.   +++|++|+|+++++..++.
T Consensus       104 ~~i~l~~g~~~~~-~~~~v~a~~~~~~~~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~  182 (533)
T 3f6t_A          104 DAVNYCHTELGLN-RDKVVAEWVNGAVANNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFH  182 (533)
T ss_dssp             HHHHHHHHTTCCC-HHHHHHHHHHHHHTCSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHH
T ss_pred             hheeccCCCCCcC-CcHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHH
Confidence            4688988888886 4555554443 3322233 4567899999999987     2 22   3699999999999999999


Q ss_pred             H-----hcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC----CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594          165 C-----VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR----KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (422)
Q Consensus       165 ~-----l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~----~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (422)
                      +     ++++||+|+++.|+|..+...++..|++++.++.    ++++++|+++|++.+. +++++|++++|+||||.++
T Consensus       183 ~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~-~~~k~v~l~~p~NPtG~~~  261 (533)
T 3f6t_A          183 SLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKD-PSIKALIVVNPTNPTSKEF  261 (533)
T ss_dssp             HHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSC-TTEEEEEEESSCTTTCBCC
T ss_pred             HhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhC-CCCeEEEEeCCCCCCcccc
Confidence            8     7899999999999999999888889999999985    3568899999999997 7899999999999999999


Q ss_pred             CHHHHHHHHc----C-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHH-----HHHHH
Q 014594          236 NDEDLLKILE----M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-----IIEYL  305 (422)
Q Consensus       236 ~~e~l~~i~~----~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~-----~~~~l  305 (422)
                      +.+++.+|++    . ++++|+||+|.+|.++....... ..+++++++||||.+|++|+|+||++++++     +++.+
T Consensus       262 ~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~~li~~l  340 (533)
T 3f6t_A          262 DTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSV-VPYNTMLVYSYSKLFGCTGWRLGVIALNEKNVFDDNIAHL  340 (533)
T ss_dssp             CHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHH-SGGGEEEEEESHHHHTCGGGCEEEEEEESSCHHHHHHHTS
T ss_pred             CHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhc-CCCCEEEEecCcccCCCcccceEEEEECcHHHHHHHHHhc
Confidence            9997777665    5 99999999999988654333322 347899999999999999999999999766     43322


Q ss_pred             --------------------------------HHhcC--CCCCcHHHHHH----HHHHcc-------CChHHH-HHHHHH
Q 014594          306 --------------------------------WRAKQ--PYNVSVAAEVA----ACAALQ-------NPIYLE-VKEALI  339 (422)
Q Consensus       306 --------------------------------~~~~~--~~~~~~~~~~a----a~~~L~-------~~~~~~-~~~~~~  339 (422)
                                                      .+...  ..+.+.+.|.+    +..+|.       ...+++ +++.++
T Consensus       341 ~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~  420 (533)
T 3f6t_A          341 DKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVS  420 (533)
T ss_dssp             CHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHH
T ss_pred             chhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHH
Confidence                                            11111  24677888877    556664       236677 889999


Q ss_pred             HHHHHHHHHHccCCCCcccCCCceEEEEEeCC------C----------CCHHHHHHHHH-hCCcEEEeCCCCC-CCCeE
Q 014594          340 KERERLFKLLKDVPFLNPYPSYSNFILCEVTS------G----------MDAKKLKDDLA-KMGVMIRHYNNKE-LKGYV  401 (422)
Q Consensus       340 ~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~------~----------~~~~~~~~~L~-~~gI~v~~~~~~~-~~~~i  401 (422)
                      ++++.+.+.|+ +++....|.+++|+|++++.      +          .+..++...|+ ++||.+.++..+. .++++
T Consensus       421 ~r~~~l~~~L~-~~~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~i  499 (533)
T 3f6t_A          421 ERYDQLHDAMQ-APKDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGEL  499 (533)
T ss_dssp             HHHHHHHHHHT-CCCCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEE
T ss_pred             HHHHHHHHhcC-CCccccCCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEE
Confidence            99999999998 77544567888999999863      1          35667766665 8899999887633 36899


Q ss_pred             EEEecChhhHHHHHHHHhhh
Q 014594          402 RVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       402 Ris~~~~~~~~~l~~al~~l  421 (422)
                      |||++... .+++.+++++|
T Consensus       500 Rls~a~~~-~e~i~~~i~~L  518 (533)
T 3f6t_A          500 RVSQANLP-TEDYALIGKQV  518 (533)
T ss_dssp             EEESSSSC-HHHHHHHHHHH
T ss_pred             EEEEeeCC-HHHHHHHHHHH
Confidence            99998532 24555555544

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=100.00  E-value=7.3e-38  Score=311.69  Aligned_cols=323  Identities=18%  Similarity=0.181  Sum_probs=248.2

Q ss_pred             CCeE-EcCCCCCCCCCC--HHHHHHHhcC-CC-------C------CCCCC-cchHHHHHHHHHHc------CCCCCCEE
Q 014594           95 EDIV-KIDANENPYGPP--PEVREALGQL-KF-------P------YIYPD-PESRRLRAALAKDS------GLESDHIL  150 (422)
Q Consensus        95 ~~~i-~l~~~~~~~~~~--~~v~~al~~~-~~-------~------~~y~~-~~~~~lr~~la~~~------~~~~~~i~  150 (422)
                      +++| +|+.+.++..++  +.+.+++.+. ..       .      ..|+. .+..++|+++++++      ++++++|+
T Consensus        31 ~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~  110 (444)
T 3if2_A           31 DQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIA  110 (444)
T ss_dssp             SSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEE
T ss_pred             chhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEE
Confidence            5689 999998877432  4455555542 22       1      45754 47899999999997      57889999


Q ss_pred             EeCCHHHHHHHHHHHhcCCCC--------------EEEEc-CCCchhHHHH------HHHcCCEEEEecCCC-----CCC
Q 014594          151 VGCGADELIDLIMRCVLDPGD--------------KIVDC-PPTFTMYEFD------AAVNGAAVVKVPRKS-----DFS  204 (422)
Q Consensus       151 ~~~G~~~al~~~~~~l~~~gd--------------~Vl~~-~p~y~~~~~~------~~~~g~~~~~v~~~~-----~~~  204 (422)
                      +|+|+++++++++++++++||              +|+++ .|+|..+...      ....|..++.++.+.     ++.
T Consensus       111 ~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  190 (444)
T 3if2_A          111 LTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYR  190 (444)
T ss_dssp             EESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEE
T ss_pred             EecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEecccccccCccccC
Confidence            999999999999999999988              78875 9999988753      234678888888653     357


Q ss_pred             CCHHHHHHH---hhcCCCeEEEEeCCCCccCcCCCHHHHHHHHc---C-CCeEEEccCCccccCCCchhh-hhhcCCcEE
Q 014594          205 LNVELIADA---VEREKPKCIFLTSPNNPDGSIINDEDLLKILE---M-PILVVLDEAYTEFSGLESRME-WVKKHDNLI  276 (422)
Q Consensus       205 ~d~~~l~~~---i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~---~-~~~li~Deay~~~~~~~~~~~-~~~~~~~~i  276 (422)
                      +|+++|+++   +. +++++|++++||||||.+++.+++++|++   . |+++|+||+|..+........ .....++++
T Consensus       191 ~d~~~l~~~l~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i  269 (444)
T 3if2_A          191 VDFEALENLPALKE-GRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTI  269 (444)
T ss_dssp             CCHHHHHTCHHHHT-TCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEE
T ss_pred             CCHHHHHHHHHhcC-CCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccccCCCCEE
Confidence            999999998   44 68999999999999999999777777754   3 999999999986432111111 112357899


Q ss_pred             EEccChhhhccccccceeeecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-----HHHHHHHHHHHHHHHH
Q 014594          277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-----VKEALIKERERLFKLL  349 (422)
Q Consensus       277 ~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-----~~~~~~~~~~~l~~~L  349 (422)
                      ++.||||. +++|+|+||+++++++++.+......  ++.+++.+.++..++++..+..     +++.++++++.+.+.|
T Consensus       270 ~~~S~sK~-~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (444)
T 3if2_A          270 LCFSLSKI-GLPGMRTGIIVADAKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLL  348 (444)
T ss_dssp             EEEESTTT-TCGGGCCEEEECCHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             EEechhhc-cCCCCceEEEEECHHHHHHHHHHHHhccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999996 78999999999999999988776553  6788899999999998876543     4556778888888877


Q ss_pred             cc-CCC--Cc-ccCCCceEEEEEeCC-CCCHHHHHHHHHhCCcEEEeCCCCC----------CCCeEEEEecChhhHHHH
Q 014594          350 KD-VPF--LN-PYPSYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRHYNNKE----------LKGYVRVSVGKPEHTDAL  414 (422)
Q Consensus       350 ~~-~~~--~~-~~p~~~~f~~~~~~~-~~~~~~~~~~L~~~gI~v~~~~~~~----------~~~~iRis~~~~~~~~~l  414 (422)
                      ++ ++.  +. ..|..++|+|++++. +.+.+++.+.|.++||.++++..+.          ..+++||+++.+  .+++
T Consensus       349 ~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~~--~e~i  426 (444)
T 3if2_A          349 KQALGDYPLMIHKPEGAIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAAD--EQTL  426 (444)
T ss_dssp             HHHSSSSSEEEECCCBSSEEEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSSC--HHHH
T ss_pred             HHhcccCCceEecCCccEEEEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeCC--HHHH
Confidence            65 432  22 356788999999986 6789999999999999999876531          126899999872  3566


Q ss_pred             HHHHhhh
Q 014594          415 MECLMHL  421 (422)
Q Consensus       415 ~~al~~l  421 (422)
                      .+++++|
T Consensus       427 ~~~l~~l  433 (444)
T 3if2_A          427 IDGIKVI  433 (444)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            6666654

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=100.00  E-value=4.1e-36  Score=294.70  Aligned_cols=316  Identities=16%  Similarity=0.096  Sum_probs=246.1

Q ss_pred             CCCCeEEcCCCCC-CCCCCHHHHHHHhc-C---CCC-CCCCC-cc----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           93 KPEDIVKIDANEN-PYGPPPEVREALGQ-L---KFP-YIYPD-PE----SRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~---~~~-~~y~~-~~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      ++.++++|+.|++ ++++++.+.+++.+ +   ... ..|+. .|    ..++++.+++++|.  +++++|+|+++++..
T Consensus        41 ~g~~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~v~~~~ggt~a~~~  118 (398)
T 3a2b_A           41 DGRRVLMFGSNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK--EAAILFSTGFQSNLG  118 (398)
T ss_dssp             TTEEEEECSCSCTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHH
T ss_pred             CCceEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC--CcEEEECCHHHHHHH
Confidence            3567899999987 66678898888765 2   111 12322 12    45678888888885  589999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC---CCeEEEEeCCCCccCcCCCHH
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE---KPKCIFLTSPNNPDGSIINDE  238 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~---~~~~i~l~~p~NPtG~~~~~e  238 (422)
                      ++++++++||.|+++.|+|..+...++..|++++.++.     +|++++++.+++.   ++++|++++|+||||.+++.+
T Consensus       119 ~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~  193 (398)
T 3a2b_A          119 PLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-----NNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLP  193 (398)
T ss_dssp             HHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-----TCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHH
T ss_pred             HHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-----CCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHH
Confidence            99999999999999999999999999999999999984     6899999999743   789999999999999999999


Q ss_pred             HHHHHHcC-CCeEEEccCCccccCCC---chhhhhhcCCc-EEEEccChhhhccccccceeeecCHHHHHHHHHhcC---
Q 014594          239 DLLKILEM-PILVVLDEAYTEFSGLE---SRMEWVKKHDN-LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ---  310 (422)
Q Consensus       239 ~l~~i~~~-~~~li~Deay~~~~~~~---~~~~~~~~~~~-~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~---  310 (422)
                      ++.++++. |+++|+||+|..+.++.   ......+..++ +++++||||.++++|   ||+++++++++.+.....   
T Consensus       194 ~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~~~~~~  270 (398)
T 3a2b_A          194 ELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDADVIDFLKHNARSVM  270 (398)
T ss_dssp             HHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEECHHHHHHHHHHCHHHH
T ss_pred             HHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeCHHHHHHHHHhcccce
Confidence            99999988 99999999999876432   12222222334 699999999999778   999999999998876421   


Q ss_pred             -CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014594          311 -PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVM  388 (422)
Q Consensus       311 -~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~  388 (422)
                       ....++....++.++|++.++.+ .+++++++++++.+.|++++ +.+.++.++|+|+.++.+.+..++.+.|.++||.
T Consensus       271 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~gi~  349 (398)
T 3a2b_A          271 FSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDHG-FDLGATESPILPIFIRSNEKTFWVTKMLQDDGVF  349 (398)
T ss_dssp             SSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHTT-CCBCSCCSSEEEEECCCHHHHHHHHHHHHHTTEE
T ss_pred             ecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhcC-CCcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCcE
Confidence             22334444445667776544444 88899999999999999885 4444566899999997555678899999988999


Q ss_pred             EEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHh
Q 014594          389 IRHYNNKE---LKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       389 v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      ++++..+.   .++++||+++   +.++++++.++|+
T Consensus       350 v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~  386 (398)
T 3a2b_A          350 VNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMV  386 (398)
T ss_dssp             CEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHH
T ss_pred             EEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHH
Confidence            99987643   3589999998   4555555555554

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=100.00  E-value=2.2e-36  Score=295.35  Aligned_cols=316  Identities=15%  Similarity=0.113  Sum_probs=247.1

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcC-CC----C-C---CCCC--cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQL-KF----P-Y---IYPD--PESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~----~-~---~y~~--~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~  164 (422)
                      +.++|+.+.. .+.++++.+++.+. ..    + .   .|+.  .+..++|+++++++|+++++|++|+|+++++..+++
T Consensus        16 ~~i~l~~~~~-~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~   94 (390)
T 1elu_A           16 NKTYFNFGGQ-GILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLW   94 (390)
T ss_dssp             TSEECCTTTC-CCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHH
T ss_pred             CeEEecCCcc-CCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHh
Confidence            4689988763 35567888888652 11    1 1   4554  467899999999999988899999999999999999


Q ss_pred             Hh-cCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594          165 CV-LDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (422)
Q Consensus       165 ~l-~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (422)
                      ++ +++||+|+++.|+|+.+...    ++..|++++.++.+  +++.+|++++++.++ +++++|++++|+||||.+++.
T Consensus        95 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~~  173 (390)
T 1elu_A           95 GLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLG-PKTRLVILSHLLWNTGQVLPL  173 (390)
T ss_dssp             HSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCC-TTEEEEEEESBCTTTCCBCCH
T ss_pred             CCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcC-CCceEEEEeccccCCceecCH
Confidence            99 89999999999999987643    56679999999975  578899999999997 689999999999999999999


Q ss_pred             HHHHHHHc----C-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh----
Q 014594          238 EDLLKILE----M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA----  308 (422)
Q Consensus       238 e~l~~i~~----~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~----  308 (422)
                      +++.++++    . |+++|+||+|......   . .+...+.++++.|+||. ..+|.++||+++++++++.+...    
T Consensus       174 ~~i~~l~~~~~~~~~~~li~Dea~~~g~~~---~-~~~~~~~d~~~~s~~K~-~~~~~g~G~~~~~~~~~~~~~~~~~g~  248 (390)
T 1elu_A          174 AEIMAVCRRHQGNYPVRVLVDGAQSAGSLP---L-DFSRLEVDYYAFTGHKW-FAGPAGVGGLYIHGDCLGEINPTYVGW  248 (390)
T ss_dssp             HHHHHHHHHCCSSSCCEEEEECTTTBTTBC---C-CTTTSCCSEEEEESSST-TCCCTTCEEEEECTTTGGGCCCCSCCT
T ss_pred             HHHHHHHhhhhhhcCcEEEEEcccccCCcC---C-ChhhcCCCEEEcccccc-ccCCCceEEEEECHHhHhhcCCccccC
Confidence            99999998    7 9999999999853211   1 12234566899999993 33567799999999887766431    


Q ss_pred             --------------------cCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCccc---CCC
Q 014594          309 --------------------KQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPY---PSY  361 (422)
Q Consensus       309 --------------------~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~---p~~  361 (422)
                                          ...++.+...+.++.++++   +.++++ ++++++++++++.+.|++++.+.+.   +..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~  328 (390)
T 1elu_A          249 RSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQ  328 (390)
T ss_dssp             TTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCS
T ss_pred             CcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCcccc
Confidence                                1234566676666655554   344566 8899999999999999988545543   456


Q ss_pred             ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          362 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       362 ~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      ++|++++++.+.+..++.+.|.++||.++++.   .++++||+++   +.++++++.++|+++
T Consensus       329 ~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~---~~~~iRis~~~~~~~~~i~~~~~~l~~~  388 (390)
T 1elu_A          329 AGLVSFTVDSPLGHRAIVQKLEEQRIYLRTIA---DPDCIRACCHYITDEEEINHLLARLADF  388 (390)
T ss_dssp             SSEEEEEECSSSCHHHHHHHHHHTTEECEEET---TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred             ccEEEEEcCCCCCHHHHHHHHHHCCEEEEecC---CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence            77888898766788999999999999999876   3589999983   556666666666554

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=100.00  E-value=1.2e-35  Score=290.62  Aligned_cols=311  Identities=16%  Similarity=0.146  Sum_probs=249.3

Q ss_pred             CCCCCCCCHHHHHHHhcCCCCCCCCCc---chHHHHHHHHHHcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 014594          103 NENPYGPPPEVREALGQLKFPYIYPDP---ESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPP  178 (422)
Q Consensus       103 ~~~~~~~~~~v~~al~~~~~~~~y~~~---~~~~lr~~la~~~~~~~~-~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p  178 (422)
                      +.++.+.++++.+++.+... ..|+..   ...++++.+++++|++++ +|++|+|+++++..++++++++||+|+++.|
T Consensus        39 ~~~~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~~  117 (393)
T 1vjo_A           39 GPGPSNAHPSVLQAMNVSPV-GHLDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVA  117 (393)
T ss_dssp             SSSCCCCCHHHHHHHSSCCC-CTTSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred             cCCCCCCCHHHHHHHhcccc-cccCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEEcC
Confidence            34567788999999987433 245432   246788888888999888 9999999999999999999999999999999


Q ss_pred             Cchh--HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccC
Q 014594          179 TFTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA  255 (422)
Q Consensus       179 ~y~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Dea  255 (422)
                      +|+.  +...++..|++++.++.+.++.+|++++++.+++.++++|++++|+||||.+++.+++.++++. |+++|+||+
T Consensus       118 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea  197 (393)
T 1vjo_A          118 GYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTV  197 (393)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECT
T ss_pred             ChhHHHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhCCceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECC
Confidence            9998  8888888999999999877778999999999973279999999999999999999999999988 999999999


Q ss_pred             CccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh---------------------cCCC-C
Q 014594          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---------------------KQPY-N  313 (422)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~---------------------~~~~-~  313 (422)
                      |. +...+  . .+...+.++++.|+||.++.+| |+||+++++++++.+...                     ...+ +
T Consensus       198 ~~-~g~~~--~-~~~~~~~di~~~s~sK~l~~~~-~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  272 (393)
T 1vjo_A          198 TS-LGGVP--I-FLDAWGVDLAYSCSQKGLGCSP-GASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHT  272 (393)
T ss_dssp             TT-TTTSC--C-CTTTTTCSEEECCSSSTTCSCS-SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSC
T ss_pred             cc-ccCcC--C-cccccCccEEEEcCcccccCCC-ceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCC
Confidence            99 32211  1 1223456789999999998777 999999999998887532                     1223 7


Q ss_pred             CcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC----ceEEEEEeCCCCCHHHHHHHHHhC-
Q 014594          314 VSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGMDAKKLKDDLAKM-  385 (422)
Q Consensus       314 ~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~f~~~~~~~~~~~~~~~~~L~~~-  385 (422)
                      .+.+.+.++.++|+..  .+++ .+++++++++++.+.|++++ +.+.++.    ++++++.+|.+.+..++.+.|.++ 
T Consensus       273 ~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  351 (393)
T 1vjo_A          273 APINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIG-LSLHVEKEYRLPTLTTVCIPDGVDGKAVARRLLNEH  351 (393)
T ss_dssp             CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcC-CcccCCccccCCcEEEEEcCCCCCHHHHHHHHHhhC
Confidence            7888999888888762  3456 88899999999999999885 4443333    367888887677889999999976 


Q ss_pred             CcEEEeCCCCCCCCeEEEEe-c--Chh-hHHHHHHHHhh
Q 014594          386 GVMIRHYNNKELKGYVRVSV-G--KPE-HTDALMECLMH  420 (422)
Q Consensus       386 gI~v~~~~~~~~~~~iRis~-~--~~~-~~~~l~~al~~  420 (422)
                      ||.++++..+..++++||++ +  ..+ +++++.++|++
T Consensus       352 gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~  390 (393)
T 1vjo_A          352 NIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQ  390 (393)
T ss_dssp             CEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred             CEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHH
Confidence            99999988655678999994 3  333 35566666554

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=100.00  E-value=5.4e-36  Score=292.39  Aligned_cols=317  Identities=15%  Similarity=0.117  Sum_probs=249.5

Q ss_pred             CCCCeEEcCCCCC-CCCCCHHHHHHHhc-CC---C---CCCCCC---cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           93 KPEDIVKIDANEN-PYGPPPEVREALGQ-LK---F---PYIYPD---PESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~~---~---~~~y~~---~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      ++.+++||+.|++ ++++++++.+++.+ +.   .   ...|+.   .+..++|+++++++|++ +.|++++| ++++..
T Consensus        37 ~g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG-t~a~~~  114 (384)
T 1bs0_A           37 DDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYS-RALLFISG-FAANQA  114 (384)
T ss_dssp             TTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCS-EEEEESCH-HHHHHH
T ss_pred             CCceEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-cEEEeCCc-HHHHHH
Confidence            3567899999986 55678899888865 21   1   123432   45789999999999985 45555555 899999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC--CCeEEEEeCCCCccCcCCCHHH
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGSIINDED  239 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~~~~~e~  239 (422)
                      ++++++++||.|+++.|+|..+...++..|++++.+|.     .|++++++.+++.  +++++++++|+||||.+++.++
T Consensus       115 ~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~  189 (384)
T 1bs0_A          115 VIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-----NDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAE  189 (384)
T ss_dssp             HHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-----TCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHH
T ss_pred             HHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-----CCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccCHHH
Confidence            99999999999999999999999888999999999983     5899999998743  3788988999999999999999


Q ss_pred             HHHHHcC-CCeEEEccCCccccCC--C-chhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC----
Q 014594          240 LLKILEM-PILVVLDEAYTEFSGL--E-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----  311 (422)
Q Consensus       240 l~~i~~~-~~~li~Deay~~~~~~--~-~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~----  311 (422)
                      +.++++. |+++|+||+|..+..+  + ......+. +.+++++||||.++++|   ||+++++++++.+......    
T Consensus       190 i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~di~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~~~~~~~~  265 (384)
T 1bs0_A          190 IQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKV-KPELLVVTFGKGFGVSG---AAVLCSSTVADYLLQFARHLIYS  265 (384)
T ss_dssp             HHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTC-CCSEEEEESSSTTSSCC---EEEEECHHHHHHHHHHCHHHHSS
T ss_pred             HHHHHHHcCcEEEEECCcccceecCCCCchHHhcCC-CCcEEEeeccchhhccC---cEEEeCHHHHHHHHHhchhhhcC
Confidence            9999987 9999999999876532  1 11222222 23489999999998766   9999999999888764322    


Q ss_pred             CCCcHHHHHHHHHHccCCh--HHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014594          312 YNVSVAAEVAACAALQNPI--YLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVM  388 (422)
Q Consensus       312 ~~~~~~~~~aa~~~L~~~~--~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~  388 (422)
                      .+.+++.+.++.++|+..+  +.+ .+++++++++++.+.|++++ +.+.++.++|+|++++.+.+..++.+.|.++||.
T Consensus       266 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~  344 (384)
T 1bs0_A          266 TSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLP-FTLADSCSAIQPLIVGDNSRALQLAEKLRQQGCW  344 (384)
T ss_dssp             BCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSS-CEECSCCSSBCCEEEESHHHHHHHHHHHHHTTEE
T ss_pred             CCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcC-CcccCCCCCEEEEEeCCHHHHHHHHHHHHHCCcE
Confidence            3678888888888887644  666 88899999999999999986 4555677888899987545678899999999999


Q ss_pred             EEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          389 IRHYNNKE---LKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       389 v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      ++++..+.   ..+++||+++   +.++++++.++|+++
T Consensus       345 v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~  383 (384)
T 1bs0_A          345 VTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  383 (384)
T ss_dssp             CCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             EEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence            99877532   3479999998   466666666666654

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=100.00  E-value=6.7e-35  Score=284.39  Aligned_cols=314  Identities=16%  Similarity=0.132  Sum_probs=249.9

Q ss_pred             EcCCCCCCCCCCHHHHHHHhcCCCCCCCCC---cchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 014594           99 KIDANENPYGPPPEVREALGQLKFPYIYPD---PESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLDPGDKIV  174 (422)
Q Consensus        99 ~l~~~~~~~~~~~~v~~al~~~~~~~~y~~---~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~~~~~~l~~~gd~Vl  174 (422)
                      .|+. .++.+.++++.+++.+... ..|+.   .-..++++.+++++|++ ++++++|+|+++++..++++++++||+|+
T Consensus        22 ~l~~-~~~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl   99 (386)
T 2dr1_A           22 KLFT-AGPVACFPEVLEIMKVQMF-SHRSKEYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKVL   99 (386)
T ss_dssp             EECC-SSSCCCCHHHHHHTTSCCC-CTTSHHHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCEEE
T ss_pred             eeec-CCCcCCcHHHHHHHhcccc-cccCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCCeEE
Confidence            4443 3455667899999887432 24532   23567888888889987 67899999999999999999999999999


Q ss_pred             EcCCCchh--HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeE
Q 014594          175 DCPPTFTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILV  250 (422)
Q Consensus       175 ~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~l  250 (422)
                      ++.|+|+.  +...++..|++++.++.+.++.+|++++++++++ +++++|++++|+||||.+.+.+++.++++. |+++
T Consensus       100 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~l  179 (386)
T 2dr1_A          100 VTIIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLV  179 (386)
T ss_dssp             EEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEE
T ss_pred             EEcCCchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeE
Confidence            99999987  8888888999999999877778999999999953 689999999999999999999999999987 9999


Q ss_pred             EEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHH----------------H----hcC
Q 014594          251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW----------------R----AKQ  310 (422)
Q Consensus       251 i~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~----------------~----~~~  310 (422)
                      |+||+|..+.....    +...+.++++.|+||.++.++ ++||+++++++++.+.                .    ...
T Consensus       180 i~D~a~~~~~~~~~----~~~~~~di~~~s~sK~~~~~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (386)
T 2dr1_A          180 FVDAVSAMGGADIK----FDKWGLDVVFSSSQKAFGVPP-GLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKEST  254 (386)
T ss_dssp             EEECTTTBTTBCCC----TTTTTCSEEEEETTSTTCCCS-SCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSC
T ss_pred             EEEccccccCcccc----ccccCCcEEEEeccccccCCC-ceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCC
Confidence            99999997653211    223456799999999988652 4899999999887762                1    233


Q ss_pred             CCCCcHHHHHHHHHHccCC-h--HHH-HHHHHHHHHHHHHHHHccCCCCcccCC----CceEEEEEeCCCCCHHHHHHHH
Q 014594          311 PYNVSVAAEVAACAALQNP-I--YLE-VKEALIKERERLFKLLKDVPFLNPYPS----YSNFILCEVTSGMDAKKLKDDL  382 (422)
Q Consensus       311 ~~~~~~~~~~aa~~~L~~~-~--~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~----~~~f~~~~~~~~~~~~~~~~~L  382 (422)
                      .++.+...+.++.++|+.. +  +++ .+++++++++++.+.|++++ +.+.++    .++++|++++.+.+..++.+.|
T Consensus       255 ~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  333 (386)
T 2dr1_A          255 PSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREIG-LDILAEPGHESPTITAVLTPPGIKGDEVYEAM  333 (386)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCTTCBCSSEEEEECCTTCCHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-CeeCcCccccCCceEEEEcCCCCCHHHHHHHH
Confidence            5678888898888888752 2  355 88899999999999999885 443333    4788999998667889999999


Q ss_pred             HhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          383 AKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       383 ~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      .++||.++++..+..++++||+++   +.++++++.++|++
T Consensus       334 ~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~  374 (386)
T 2dr1_A          334 RKRGFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLRE  374 (386)
T ss_dssp             HHTTEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred             HHCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence            988999999875445689999998   45556666555543

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=100.00  E-value=2.6e-35  Score=290.49  Aligned_cols=318  Identities=20%  Similarity=0.204  Sum_probs=248.0

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-CC--------CCCCCC---cchHHHHHHHHHHcCC-CCCCEEEeCCHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-KF--------PYIYPD---PESRRLRAALAKDSGL-ESDHILVGCGADELIDL  161 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~--------~~~y~~---~~~~~lr~~la~~~~~-~~~~i~~~~G~~~al~~  161 (422)
                      .++++|+.++++ +.++.+.+++.+. ..        .+.|+.   .+..++|++++++++. ++++|++|+|+++++..
T Consensus        27 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~  105 (420)
T 1t3i_A           27 HPLVYLDNAATS-QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINL  105 (420)
T ss_dssp             EECEECBTTTCC-CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHH
T ss_pred             CceEEecCCccC-CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHH
Confidence            357999999988 6789998888752 11        123442   3578999999999998 78899999999999999


Q ss_pred             HHHHh----cCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCc
Q 014594          162 IMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (422)
Q Consensus       162 ~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~  233 (422)
                      +++++    +++||+|+++.|+|+.    +...++..|++++.++.++++.+|+++++++++ +++++|++++|+||||.
T Consensus       106 ~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~  184 (420)
T 1t3i_A          106 VAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLS-EKTKLVTVVHISNTLGC  184 (420)
T ss_dssp             HHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCC-TTEEEEEEESBCTTTCB
T ss_pred             HHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhC-CCceEEEEeCCcccccC
Confidence            99999    8999999999999987    566777789999999987778899999999997 68999999999999999


Q ss_pred             CCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC-
Q 014594          234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-  311 (422)
Q Consensus       234 ~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~-  311 (422)
                      +++.+++.++++. |+++|+||+|..+.....    ....+.++++.|+||.+|.+|  +||+++++++++.+...... 
T Consensus       185 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~----~~~~~~di~~~s~sK~~~~~g--~G~~~~~~~~~~~~~~~~~~~  258 (420)
T 1t3i_A          185 VNPAEEIAQLAHQAGAKVLVDACQSAPHYPLD----VQLIDCDWLVASGHKMCAPTG--IGFLYGKEEILEAMPPFFGGG  258 (420)
T ss_dssp             BCCHHHHHHHHHHTTCEEEEECTTTTTTSCCC----HHHHTCSEEEEEGGGTTSCTT--CEEEEECHHHHHHSCCCSCST
T ss_pred             cCCHHHHHHHHHHcCCEEEEEhhhccCCccCc----hhhcCCCEEEEehhhhcCCCc--eEEEEEchHHHhhcCceecCC
Confidence            9999999999987 999999999986543211    112245689999999888777  89999999998877654321 


Q ss_pred             ---------------------CCCcHHHHHHHHH-HccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCccc-CC-----
Q 014594          312 ---------------------YNVSVAAEVAACA-ALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPY-PS-----  360 (422)
Q Consensus       312 ---------------------~~~~~~~~~aa~~-~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p~-----  360 (422)
                                           .+.+.+.+.++.. +++.-  .+++ ++++++++++++.+.|++++.+.+. +.     
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~  338 (420)
T 1t3i_A          259 EMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGD  338 (420)
T ss_dssp             TSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSC
T ss_pred             CccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccc
Confidence                                 1244445544333 34321  2345 8888999999999999988545543 32     


Q ss_pred             CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          361 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       361 ~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~--------~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      .++++++.++ +.+.+++.+.|.++||.++++..        .+.++++||+++   +.++++++.++|+++
T Consensus       339 ~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~  409 (420)
T 1t3i_A          339 RAALASFNVA-GLHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQAT  409 (420)
T ss_dssp             BCSEEEEEET-TBCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             cCCEEEEEEC-CCCHHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Confidence            3777788887 46788899999999999998743        123689999998   556677777777653

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=100.00  E-value=6.7e-35  Score=285.59  Aligned_cols=315  Identities=16%  Similarity=0.155  Sum_probs=245.9

Q ss_pred             cCCCCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Q 014594          100 IDANENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDC  176 (422)
Q Consensus       100 l~~~~~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~~~~-~i~~~~G~~~al~~~~~~l~~~gd~Vl~~  176 (422)
                      +..++++.++++++.+++.+....+.++.+  ...++|++++++++.+++ +|++|+|+++++..++++++++||+|+++
T Consensus        20 ~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~   99 (396)
T 2ch1_A           20 IMMGPGPSNCSKRVLTAMTNTVLSNFHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIA   99 (396)
T ss_dssp             BCCSSSSCCCCHHHHHHTTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred             eeecCCCCCCCHHHHHHhccccccCCChhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEEE
Confidence            455778888899999999874322222333  378999999999999888 89999999999999999999999999999


Q ss_pred             CCCchhHH--HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEc
Q 014594          177 PPTFTMYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLD  253 (422)
Q Consensus       177 ~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~D  253 (422)
                      .|+|..+.  ..++..|++++.++.+.++.+|++++++.+++.++++|++++|+||||.+++.+++.++++. |+++|+|
T Consensus       100 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D  179 (396)
T 2ch1_A          100 VNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVD  179 (396)
T ss_dssp             ESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEE
T ss_pred             cCCcccHHHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEE
Confidence            99999885  36778999999999877788999999999974379999999999999999999999999987 9999999


Q ss_pred             cCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh-------------------------
Q 014594          254 EAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-------------------------  308 (422)
Q Consensus       254 eay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~-------------------------  308 (422)
                      |+|.... .+  . .+...+..+++.|++|.++ ++.++|++++++++++.+...                         
T Consensus       180 ea~~~g~-~~--~-~~~~~~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (396)
T 2ch1_A          180 AVASLCG-VP--F-YMDKWEIDAVYTGAQKVLG-APPGITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPK  254 (396)
T ss_dssp             CTTTBTT-BC--C-CTTTTTCCEEECCCC-CCC-CCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCC
T ss_pred             ccccccC-Cc--c-chhhcCcCEEEEcCCcccc-CCCCeEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcccC
Confidence            9998321 11  1 1222334577789999764 334579999999988877531                         


Q ss_pred             cCCCCCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCc-----eEEEEEeCCCCCHHHHHH
Q 014594          309 KQPYNVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYS-----NFILCEVTSGMDAKKLKD  380 (422)
Q Consensus       309 ~~~~~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~-----~f~~~~~~~~~~~~~~~~  380 (422)
                      ...++.+...+.++.++|+..  ++++ .+++++++++++.+.|++++ +.+.++.+     .+++++++.+.+..++.+
T Consensus       255 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (396)
T 2ch1_A          255 RYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMG-LDIFVKDPRHRLPTVTGIMIPKGVDWWKVSQ  333 (396)
T ss_dssp             CCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCBSSCSGGGBCTTEEEEECCTTCCHHHHHH
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCC-CeeccCCccccCCceEEEEcCCCCCHHHHHH
Confidence            112457778888888888652  4455 88899999999999998875 44444333     488999876778999999


Q ss_pred             HHHh-CCcEEEeCCCCCCCCeEEEEe-c---ChhhHHHHHHHHhh
Q 014594          381 DLAK-MGVMIRHYNNKELKGYVRVSV-G---KPEHTDALMECLMH  420 (422)
Q Consensus       381 ~L~~-~gI~v~~~~~~~~~~~iRis~-~---~~~~~~~l~~al~~  420 (422)
                      .|.+ +||.++++..+..++++||++ +   +.++++++.++|++
T Consensus       334 ~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~  378 (396)
T 2ch1_A          334 YAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKE  378 (396)
T ss_dssp             HHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred             HHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHH
Confidence            9985 599999876544578999998 4   45556666666654

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=100.00  E-value=5.6e-35  Score=284.56  Aligned_cols=313  Identities=20%  Similarity=0.213  Sum_probs=240.5

Q ss_pred             EEcCCCCCCCCCCHHHHHHHhc-CCCCC-------C--C-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 014594           98 VKIDANENPYGPPPEVREALGQ-LKFPY-------I--Y-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (422)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~-~~~~~-------~--y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l  166 (422)
                      +.|+.+.+. ++++++++++.+ +...+       .  | +..+..++++++++++|+++++|++|+|+++++..+++++
T Consensus         3 ~yld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~   81 (384)
T 1eg5_A            3 VYFDNNATT-RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTV   81 (384)
T ss_dssp             EECBTTTCC-CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHH
T ss_pred             EEEecCccC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhh
Confidence            677877776 678899988876 22111       0  1 1123578999999999998899999999999999999998


Q ss_pred             c----CCCCEEEEcCCCchhHHHHH---HHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594          167 L----DPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (422)
Q Consensus       167 ~----~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~  239 (422)
                      +    ++||+|+++.|+|+.+...+   +..|++++.++.++++.+|++++++.++ +++++|++++|+||||.+++.++
T Consensus        82 ~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~~~~  160 (384)
T 1eg5_A           82 AETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVD-EDTFLVSIMAANNEVGTIQPVED  160 (384)
T ss_dssp             HHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCC-TTEEEEEEESBCTTTCBBCCHHH
T ss_pred             hhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhC-CCCeEEEEECCCCCcccccCHHH
Confidence            7    79999999999998776555   6689999999987777899999999997 68999999999999999999999


Q ss_pred             HHHHHcC-C--CeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHH--HHHHHHh-----c
Q 014594          240 LLKILEM-P--ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI--IEYLWRA-----K  309 (422)
Q Consensus       240 l~~i~~~-~--~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~--~~~l~~~-----~  309 (422)
                      +.++++. |  +++|+||+|. +....  . .+...+.++++.|+||.+|++|  +||+++++++  .+.+...     .
T Consensus       161 i~~l~~~~~~~~~li~Dea~~-~~~~~--~-~~~~~~~di~~~s~sK~~g~~G--~G~~~~~~~~~~~~~~~~~~~~~~~  234 (384)
T 1eg5_A          161 VTRIVKKKNKETLVHVDAVQT-IGKIP--F-SLEKLEVDYASFSAHKFHGPKG--VGITYIRKGVPIRPLIHGGGQERGL  234 (384)
T ss_dssp             HHHHHHHHCTTCEEEEECTTT-TTTSC--C-CCTTTCCSEEEEEGGGGTSCTT--CEEEEECTTSCCCCSBCSSCTTTTT
T ss_pred             HHHHHHhcCCceEEEEEhhhh-cCCcc--c-CchhcCCCEEEecHHHhcCCCc--eEEEEEcCCCccccccccCcccccc
Confidence            9999987 8  9999999998 32111  1 1222356789999999998778  7999998875  2222111     1


Q ss_pred             CCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCC---CceEEEEEeCCCCCHHHHHHHHH
Q 014594          310 QPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNP-YPS---YSNFILCEVTSGMDAKKLKDDLA  383 (422)
Q Consensus       310 ~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~---~~~f~~~~~~~~~~~~~~~~~L~  383 (422)
                      ..++.+.+.+.++.++|+. .++++ .+++++++++++.+.|++.+ +.+ .+.   .+.++++.++ +.+.+++.+.|.
T Consensus       235 ~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~  312 (384)
T 1eg5_A          235 RSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLG-AHIITPLEISLPNTLSVSFP-NIRGSTLQNLLS  312 (384)
T ss_dssp             BCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTT-CEECSCTTSBCTTEEEEECT-TCCHHHHHHHHH
T ss_pred             cCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCC-eEEeCCcccCCCCEEEEEeC-CCCHHHHHHHHh
Confidence            3467888999888888876 34566 88899999999999998854 443 222   2457778887 467889999999


Q ss_pred             hCCcEEEeCCCCC-------------------CCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          384 KMGVMIRHYNNKE-------------------LKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       384 ~~gI~v~~~~~~~-------------------~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      ++||.++++..+.                   ..+++||+++   +.++++++.++|++
T Consensus       313 ~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~  371 (384)
T 1eg5_A          313 GYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEE  371 (384)
T ss_dssp             HTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             hCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence            9999999865421                   1379999998   56666666666654

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=100.00  E-value=6.4e-35  Score=286.31  Aligned_cols=318  Identities=17%  Similarity=0.177  Sum_probs=247.0

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-CC----CCCC-------CCcchHHHHHHHHHHcCC-CCCCEEEeCCHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-KF----PYIY-------PDPESRRLRAALAKDSGL-ESDHILVGCGADELIDL  161 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~----~~~y-------~~~~~~~lr~~la~~~~~-~~~~i~~~~G~~~al~~  161 (422)
                      .++++|+.+.++ +.++++.+++.+. ..    .+.|       +..+..++|++++++++. ++++|++|+|+++++..
T Consensus        22 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~  100 (406)
T 1kmj_A           22 LPLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINL  100 (406)
T ss_dssp             EECEECCTTTCC-CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHH
T ss_pred             CceEEecCCccC-CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHH
Confidence            357999999887 5778888888652 11    1211       233567899999999998 67899999999999999


Q ss_pred             HHHHh----cCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCc
Q 014594          162 IMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (422)
Q Consensus       162 ~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~  233 (422)
                      +++++    +++||+|+++.|+|+.    +...++..|++++.++.++++.+|++++++.++ +++++|++++|+||||.
T Consensus       101 ~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~  179 (406)
T 1kmj_A          101 VANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-EKTRLLAITHVSNVLGT  179 (406)
T ss_dssp             HHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCC-TTEEEEEEESBCTTTCC
T ss_pred             HHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhc-cCCeEEEEeCCCccccC
Confidence            99999    8999999999999864    445567789999999987777899999999997 68999999999999999


Q ss_pred             CCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC-
Q 014594          234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-  311 (422)
Q Consensus       234 ~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~-  311 (422)
                      +++.+++.++++. |+++|+||+|..+.....    +...+.++++.|+||.+|.+|  +||+++++++++.+...... 
T Consensus       180 ~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~----~~~~~~d~~~~s~~K~~g~~G--~G~~~~~~~~~~~~~~~~~~~  253 (406)
T 1kmj_A          180 ENPLAEMITLAHQHGAKVLVDGAQAVMHHPVD----VQALDCDFYVFSGHKLYGPTG--IGILYVKEALLQEMPPWEGGG  253 (406)
T ss_dssp             BCCHHHHHHHHHHTTCEEEEECTTTTTTSCCC----HHHHTCSEEEEEGGGTTSCTT--CEEEEECHHHHHHCCCSSCST
T ss_pred             cCCHHHHHHHHHHcCCEEEEEchhhcCCCCCc----ccccCCCEEEEEchhccCCCC--cEEEEEeHHHHhhcCCcccCC
Confidence            9999999999987 999999999986542111    122356689999999998777  89999999998877543321 


Q ss_pred             ----------------------CCCcHHHHHHHH-HHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCcccCC--Cce
Q 014594          312 ----------------------YNVSVAAEVAAC-AALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPYPS--YSN  363 (422)
Q Consensus       312 ----------------------~~~~~~~~~aa~-~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~--~~~  363 (422)
                                            .+.+.+.+.++. ++++..  .+++ .+++++++++++.+.|++++.+.+.++  .++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~  333 (406)
T 1kmj_A          254 SMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLG  333 (406)
T ss_dssp             TSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCS
T ss_pred             CceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCC
Confidence                                  123344444433 444432  2455 888899999999999999855555444  577


Q ss_pred             EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          364 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       364 f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~--------~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      |+++.++ +.+..++.+.|.++||.++++..        .+.++++||+++   +.++++++.++++++
T Consensus       334 ~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~  401 (406)
T 1kmj_A          334 VIAFNLG-KHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRI  401 (406)
T ss_dssp             EEEEEET-TCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             EEEEEEC-CCCHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHH
Confidence            7777886 56788999999999999998763        233689999998   566777777777653

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=100.00  E-value=1.3e-34  Score=278.77  Aligned_cols=307  Identities=15%  Similarity=0.131  Sum_probs=238.5

Q ss_pred             CCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCc
Q 014594          103 NENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF  180 (422)
Q Consensus       103 ~~~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y  180 (422)
                      +.++.++++++++++.+....+.|+..  ...++|+++++++|++++++++|+|+++++..++++++++||+|+++.|+|
T Consensus         6 ~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~   85 (352)
T 1iug_A            6 TPGPVRLHPKALEALARPQLHHRTEAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGK   85 (352)
T ss_dssp             SSSSCCCCHHHHHHHHSCCCCTTSHHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSH
T ss_pred             cCCCCCCCHHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeCCc
Confidence            346677889999999874332344432  468999999999999888999999999999999999999999999999999


Q ss_pred             hhHH--HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC---CCeEEEccC
Q 014594          181 TMYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEA  255 (422)
Q Consensus       181 ~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~---~~~li~Dea  255 (422)
                      +.+.  ..++..|++++.++.++++.+|++++++    +++++|++++|+||||.+++.+++.++++.   |+++|+||+
T Consensus        86 ~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a  161 (352)
T 1iug_A           86 FSERFYEIALEAGLVVERLDYPYGDTPRPEDVAK----EGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMV  161 (352)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCC----SSCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECT
T ss_pred             hhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHhc----cCCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECC
Confidence            8865  4455689999999987777789888876    478999999999999999999999999974   899999999


Q ss_pred             CccccCCCchhhhhhcCCcEEEEccChhh-hccccccceeeecCHHHHHH---------HH-------HhcCCCCCcHHH
Q 014594          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKR-AGLAGLRVGYGAFPLSIIEY---------LW-------RAKQPYNVSVAA  318 (422)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~~G~r~G~i~~~~~~~~~---------l~-------~~~~~~~~~~~~  318 (422)
                      |..... +  .. ....+.++++.|+||. ++.+|  +||+++++++++.         +.       .....++.+...
T Consensus       162 ~~~~~~-~--~~-~~~~~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (352)
T 1iug_A          162 TSLLVG-E--VA-LEAMGVDAAASGSQKGLMCPPG--LGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINL  235 (352)
T ss_dssp             TTBTTB-C--CC-SGGGTCSEEEEESSSTTCCCSC--EEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHH
T ss_pred             ccccCc-c--ee-ccccCeeEEEecCcccccCCCc--eeEEEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHH
Confidence            973221 1  11 1122455889999994 44334  7999999987754         21       122346678888


Q ss_pred             HHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC--CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC
Q 014594          319 EVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPS--YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN  394 (422)
Q Consensus       319 ~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~--~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~  394 (422)
                      +.++.++++. .++++ .+++++++++++.+.|++++ +.+.++  .++++|++++++.+..++.+.|.++||.++++..
T Consensus       236 ~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~  314 (352)
T 1iug_A          236 VLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEGG-LRPVPKRFSPAVAAFYLPEGVPYARVKEAFAQRGAVIAGGQG  314 (352)
T ss_dssp             HHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHTT-CEESCSSBCTTCEEEECCTTCCHHHHHHHHHTTTEECEECCG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CcccccccCCeEEEEEcCCCCCHHHHHHHHHHCCEEEEeCCC
Confidence            7777777764 23355 88899999999999999884 444433  6789999998667889999999999999999875


Q ss_pred             CCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          395 KELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       395 ~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      +..++++||+++   +.++++++.++|++
T Consensus       315 ~~~~~~iRi~~~~~~~~~~i~~~~~~l~~  343 (352)
T 1iug_A          315 PLKGKVFRLSLMGAYDRYEALGVAGMFRE  343 (352)
T ss_dssp             GGTTTEEEECCCSSCCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEEccccCCHHHHHHHHHHHHH
Confidence            445689999998   45566666666654

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=100.00  E-value=5.4e-34  Score=277.63  Aligned_cols=310  Identities=13%  Similarity=0.070  Sum_probs=241.3

Q ss_pred             CCCCCCCCCHHHHHHHhcCCCCCCCCC--cchHHHHHHHHHHcCCCC--CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcC
Q 014594          102 ANENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLES--DHILVGCGADELIDLIMRCVLDPGDKIVDCP  177 (422)
Q Consensus       102 ~~~~~~~~~~~v~~al~~~~~~~~y~~--~~~~~lr~~la~~~~~~~--~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~  177 (422)
                      .+..|.++++++++++.+....+.++.  ....++++++++++++++  ++|++|+|+++++. ++..++++||+|+++.
T Consensus         6 ~~~gp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~~~   84 (384)
T 3zrp_A            6 LHVGPTTIKEDVLVAGLENNVGFTSKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILVVS   84 (384)
T ss_dssp             CCSSCSCCCHHHHHHTTCCSCCTTSHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEEEC
T ss_pred             ccCCCCCCCHHHHHHhhccccccccHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEEec
Confidence            344677788999999987422222222  246789999999999987  88999999999999 9998999999999999


Q ss_pred             CCchh--HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEcc
Q 014594          178 PTFTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDE  254 (422)
Q Consensus       178 p~y~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~De  254 (422)
                      |+|+.  +...++..|++++.++.+.++.+|++++++.+++.++++|++++|+||||.+++.+++.++++. |+++|+|+
T Consensus        85 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~  164 (384)
T 3zrp_A           85 NGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDG  164 (384)
T ss_dssp             SSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEEC
T ss_pred             CCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEEC
Confidence            99965  5566677899999999877888999999999986589999999999999999999999999998 99999999


Q ss_pred             CCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHH-------------HH-----------hcC
Q 014594          255 AYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL-------------WR-----------AKQ  310 (422)
Q Consensus       255 ay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l-------------~~-----------~~~  310 (422)
                      +|.......    .....+.++++.|+||.++ ++.++||+++++++++.+             ..           ...
T Consensus       165 a~~~~~~~~----~~~~~~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (384)
T 3zrp_A          165 VSSVGAEEV----KAEEWNVDVYLTASQKALG-SAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAA  239 (384)
T ss_dssp             TTTTTTSCC----CTTTTTCSEEEEETTSTTC-CCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCC
T ss_pred             cccccCccc----cccccCCCEEEecCccccc-CCCceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCC
Confidence            998543211    1123345689999999875 334589999999998877             11           222


Q ss_pred             CC-CCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC-----CceEEEEEeCCCCCHHHHHHH
Q 014594          311 PY-NVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPS-----YSNFILCEVTSGMDAKKLKDD  381 (422)
Q Consensus       311 ~~-~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~-----~~~f~~~~~~~~~~~~~~~~~  381 (422)
                      .+ +.+...+.++.++++.  ...++ ++++++++++++.+.|++++ +.+.++     .++++++.++. .+..++.+.
T Consensus       240 ~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  317 (384)
T 3zrp_A          240 YFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEALG-LEIVARRPESYSNTVTGVILKV-ADPQKVLAG  317 (384)
T ss_dssp             CSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSCSSGGGBCSSEEEEECSS-SCHHHHHHH
T ss_pred             cCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCC-CeEccCcccccCccEEEEECCC-CCHHHHHHH
Confidence            33 5676666666666653  12245 88899999999999999884 444333     36788899985 789999999


Q ss_pred             HHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          382 LAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       382 L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      |.++||.++++..... +++||++.   +.++++++.++|++
T Consensus       318 l~~~gi~v~~g~~~~~-~~iRi~~~~~~~~e~i~~~~~~l~~  358 (384)
T 3zrp_A          318 TVNEGVEFAPGVHPAF-KYFRIGHMGWVTPNDAIIAISVIER  358 (384)
T ss_dssp             HHTTTCCCEECCCTTC-CEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred             HHHCCEEEecCCCCCc-CEEEEeccccCCHHHHHHHHHHHHH
Confidence            9989999998774322 89999987   45666666666654

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=100.00  E-value=4.1e-35  Score=287.32  Aligned_cols=316  Identities=16%  Similarity=0.168  Sum_probs=244.9

Q ss_pred             CCCeEEcCCCCCCC--CCCHHHHHHHhcC----CC---CCCCC---CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           94 PEDIVKIDANENPY--GPPPEVREALGQL----KF---PYIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        94 ~~~~i~l~~~~~~~--~~~~~v~~al~~~----~~---~~~y~---~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      +.++|||+.| +++  .++|++.+++.+.    ..   ...|+   .....+++++++++++.+ ++|++++| ++++..
T Consensus        42 g~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~-~~i~~~sG-t~a~~~  118 (399)
T 3tqx_A           42 EKEVLNFCAN-NYLGLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLGTD-DTILYSSC-FDANGG  118 (399)
T ss_dssp             TEEEEECSSC-CTTSCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHTCS-EEEEESCH-HHHHHT
T ss_pred             CeeEEEeecc-CcccccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHCCC-cEEEECch-HHHHHH
Confidence            4578999999 444  4578888877652    11   12222   224689999999999964 56666555 779999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCC
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIIN  236 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~  236 (422)
                      ++++++++||.|+++.|+|..+...++..|++++.++.     .|++.+++.+++.     ++++|++++|+||||.+++
T Consensus       119 ~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~  193 (399)
T 3tqx_A          119 LFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKN-----NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIAD  193 (399)
T ss_dssp             THHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-----TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECC
T ss_pred             HHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCC-----CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCC
Confidence            99999999999999999999999999999999999984     4678888888641     7999999999999999999


Q ss_pred             HHHHHHHHcC-CCeEEEccCCccccCCC---chhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC
Q 014594          237 DEDLLKILEM-PILVVLDEAYTEFSGLE---SRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (422)
Q Consensus       237 ~e~l~~i~~~-~~~li~Deay~~~~~~~---~~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~  311 (422)
                      .+++.++|+. |+++|+||+|.....+.   ......+ ..+.+++++||||.++  |++.||+++++++++.+......
T Consensus       194 l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~~~~~~~~~~~~~~  271 (399)
T 3tqx_A          194 LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGHKEIIEWLRNRSRP  271 (399)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEECHHHHHHHHHHCHH
T ss_pred             HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcCHHHHHHHHHhCcc
Confidence            9999999987 99999999996322211   2222222 1355699999999987  45569999999999988775432


Q ss_pred             ----CCCcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhC
Q 014594          312 ----YNVSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKM  385 (422)
Q Consensus       312 ----~~~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~  385 (422)
                          .+.++..+.++.++++.. ++.+ .+++++++++++.+.|++++ +.+.++.++|+|+.++...+..++.+.|.++
T Consensus       272 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  350 (399)
T 3tqx_A          272 YLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKLG-FQLVPGNHPIIPVMLGDAQLATNMADHLLQE  350 (399)
T ss_dssp             HHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-CCBCCCSSSEEEEEEECHHHHHHHHHHHHHT
T ss_pred             eeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC-CCcCCCCCCEEEEEeCCHHHHHHHHHHHHHC
Confidence                367888888888888765 5566 89999999999999999886 3445788899999997655678999999999


Q ss_pred             CcEEEeCCCC---CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          386 GVMIRHYNNK---ELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       386 gI~v~~~~~~---~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      ||.++++..+   ...+++||+++   +.++++++.++|++
T Consensus       351 gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~  391 (399)
T 3tqx_A          351 GIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQ  391 (399)
T ss_dssp             TEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHH
Confidence            9999976542   33579999997   45555555555543

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=100.00  E-value=7e-36  Score=289.89  Aligned_cols=313  Identities=15%  Similarity=0.140  Sum_probs=241.2

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-CCC----------CC-CCCcchHHHHHH-HHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-KFP----------YI-YPDPESRRLRAA-LAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~----------~~-y~~~~~~~lr~~-la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      +++++|+.+.+..++++++.+++.+. ...          .. ++..+..+++++ ++++++.+  +|++|+|+++++..
T Consensus         7 ~~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~--~v~~~~g~t~a~~~   84 (371)
T 2e7j_A            7 KDFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCD--VARVTNGAREAKFA   84 (371)
T ss_dssp             -CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSS--EEEEESSHHHHHHH
T ss_pred             CCcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCCC--EEEEeCChHHHHHH
Confidence            45789998777777889999999863 211          11 245678999999 99999986  99999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEec--CCCCCCCCHHHHHHHhhc----CCCeEEEEeCCCCccCcCC
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVER----EKPKCIFLTSPNNPDGSII  235 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--~~~~~~~d~~~l~~~i~~----~~~~~i~l~~p~NPtG~~~  235 (422)
                      ++++++++||+|+++.|+|+.+...++..|++++.++  .++++.+|++++++.+++    +++++|++++|+||||.++
T Consensus        85 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~  164 (371)
T 2e7j_A           85 VMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLP  164 (371)
T ss_dssp             HHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCC
T ss_pred             HHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccC
Confidence            9999999999999999999999888999999999999  777789999999999964    5789999999999999999


Q ss_pred             CHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHH-HHHhcC---
Q 014594          236 NDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY-LWRAKQ---  310 (422)
Q Consensus       236 ~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~-l~~~~~---  310 (422)
                      +.+++.++++. |+++|+||+|..+..... ..   ..+.++++.|+||.++. |.|+||+++++++++. +.....   
T Consensus       165 ~~~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~---~~~~di~~~s~sK~~~~-~~~~G~~~~~~~~~~~~~~~~~~~~~  239 (371)
T 2e7j_A          165 DVKKIAKVCSEYDVPLLVNGAYAIGRMPVS-LK---EIGADFIVGSGHKSMAA-SGPIGVMGMKEEWAEIVLRRSEKYKN  239 (371)
T ss_dssp             CHHHHHHHHHTTTCCEEEECTTTBTTBCCC-HH---HHTCSEEEEEHHHHSSC-CSSCEEEEECTTTTTTTTCBCSSCTT
T ss_pred             CHHHHHHHHHHcCCeEEEECccccCCCCCC-hh---hcCCCEEEecCCcCCCC-CCCcEEEEEechhhhhhccccccCcc
Confidence            99999999998 999999999997653212 11   12344899999998874 4599999999988776 654433   


Q ss_pred             ------CCCCcHHHHHHHHHHccCChHHHHHHHH--HHHHHHHHHHHccCCCCccc-CC--CceEEEEEeCCCCCHHHHH
Q 014594          311 ------PYNVSVAAEVAACAALQNPIYLEVKEAL--IKERERLFKLLKDVPFLNPY-PS--YSNFILCEVTSGMDAKKLK  379 (422)
Q Consensus       311 ------~~~~~~~~~~aa~~~L~~~~~~~~~~~~--~~~~~~l~~~L~~~~~~~~~-p~--~~~f~~~~~~~~~~~~~~~  379 (422)
                            .++.+...+.++.++++.... +..+++  +++++++.+.|++++ +.+. +.  .++++|++++   +..++.
T Consensus       240 ~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~  314 (371)
T 2e7j_A          240 KEVELLGCTARGATIITLMASFPHVRE-RIKRWDEEVEKARRFAAEMEKLG-IKQLGDNPHNHDLMFFHAE---VLYEIS  314 (371)
T ss_dssp             SBGGGTTCCCCSHHHHHHHHHHHHHHH-HGGGHHHHHHHHHHHHHHHHHTT-CEEESSSSCCSSEEEEECH---HHHHHH
T ss_pred             cccccccCCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcC-cEEecCCCccCceEEEECC---CHHHHH
Confidence                  445566666666566543221 355566  888899999998874 4433 32  4789999986   678899


Q ss_pred             HHHHhCCcEEEeCCCC-----C-CCCeEE-EEecC----hhhHHHHHHHHhh
Q 014594          380 DDLAKMGVMIRHYNNK-----E-LKGYVR-VSVGK----PEHTDALMECLMH  420 (422)
Q Consensus       380 ~~L~~~gI~v~~~~~~-----~-~~~~iR-is~~~----~~~~~~l~~al~~  420 (422)
                      +.|.++||.+.+ ..+     + .++++| |+++.    .++++++.++|+.
T Consensus       315 ~~l~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~  365 (371)
T 2e7j_A          315 KKAKGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKE  365 (371)
T ss_dssp             HHSSSGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHH
Confidence            999899999987 321     1 168999 99873    4455555555543

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=100.00  E-value=5.6e-34  Score=278.64  Aligned_cols=316  Identities=14%  Similarity=0.105  Sum_probs=242.6

Q ss_pred             eEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCC--cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 014594           97 IVKIDANENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV  174 (422)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~--~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl  174 (422)
                      .+.|+.+ ++.++++++++++.+....+.|+.  ....++|+++++++|+++++|++|+|+++++..++++++++||+|+
T Consensus         9 ~~yl~~~-~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl   87 (392)
T 2z9v_A            9 PVITLTA-GPVNAYPEVLRGLGRTVLYDYDPAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLISPDDVVL   87 (392)
T ss_dssp             CSEECSS-SCCCCCHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHCCTTCCEE
T ss_pred             cceeecC-CCcCCCHHHHHHHhccccccccHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhcCCCCEEE
Confidence            3667665 456778999999987432233332  2467899999999999889999999999999999999999999999


Q ss_pred             EcCCCchhH--HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeE
Q 014594          175 DCPPTFTMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILV  250 (422)
Q Consensus       175 ~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~l  250 (422)
                      ++.|+|+.+  ...++..|++++.++.++++.+|++++++++++ +++++|++++|+||||.+++.+++.++++. |+++
T Consensus        88 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~l  167 (392)
T 2z9v_A           88 NLASGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYL  167 (392)
T ss_dssp             EEESSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEE
T ss_pred             EecCCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeE
Confidence            999999865  344455799999999876777999999999953 579999999999999999999999999987 9999


Q ss_pred             EEccCCccccCCCchhhhhhcCCcEEEEccChhhh-ccccccceeeecCHHHHHHHHHhc--------------------
Q 014594          251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRAK--------------------  309 (422)
Q Consensus       251 i~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~r~G~i~~~~~~~~~l~~~~--------------------  309 (422)
                      |+||+|..... +  .. +...+.++++.|+||.+ +.+|  +||+++++++++.+....                    
T Consensus       168 i~D~a~~~g~~-~--~~-~~~~~~d~~~~s~sK~~~~~~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~  241 (392)
T 2z9v_A          168 IVDAVSSFGGM-K--TH-PEDCKADIYVTGPNKCLGAPPG--LTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRD  241 (392)
T ss_dssp             EEECTTTBTTB-S--CC-GGGGTCSEEEECSSSTTCCCSC--CEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTT
T ss_pred             EEEcccccCCc-c--cc-cccccceEEEecCcccccCCCc--eeEEEECHHHHHHhhhccCCCCceeccHHHHHhhhccc
Confidence            99999984221 1  11 12224568899999954 4455  599999999988875421                    


Q ss_pred             --CCCCCcHHHHHHHHHHccCC-hH-HH-HHHHHHHHHHHHHHHHccCCCCcccC-C----CceEEEEEeCCCCCHHHHH
Q 014594          310 --QPYNVSVAAEVAACAALQNP-IY-LE-VKEALIKERERLFKLLKDVPFLNPYP-S----YSNFILCEVTSGMDAKKLK  379 (422)
Q Consensus       310 --~~~~~~~~~~~aa~~~L~~~-~~-~~-~~~~~~~~~~~l~~~L~~~~~~~~~p-~----~~~f~~~~~~~~~~~~~~~  379 (422)
                        ..++.+...+.++.++++.. ++ ++ .+++++++++++.+.|++++ +.+.+ +    .+++++++++++.+..++.
T Consensus       242 ~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  320 (392)
T 2z9v_A          242 KPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAMG-LSVWAASDSIASPTTTAVRTPDGVDEKALR  320 (392)
T ss_dssp             SCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSSSGGGBCTTEEEEECCTTCCHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcC-CeeccCCccccCCceEEEECCCCCCHHHHH
Confidence              12455666666666666542 22 45 88889999999999998874 44332 3    4678899997667889999


Q ss_pred             HHHHhC-CcEEEeCCCCCCCCeEEEEe-c---ChhhHHHHHHHHhh
Q 014594          380 DDLAKM-GVMIRHYNNKELKGYVRVSV-G---KPEHTDALMECLMH  420 (422)
Q Consensus       380 ~~L~~~-gI~v~~~~~~~~~~~iRis~-~---~~~~~~~l~~al~~  420 (422)
                      +.|.++ ||.++++..+..++++||++ +   +.++++++.++|++
T Consensus       321 ~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~  366 (392)
T 2z9v_A          321 QAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGG  366 (392)
T ss_dssp             HHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred             HHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHH
Confidence            999976 99999987555578999994 5   45566666665543

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=100.00  E-value=5.7e-34  Score=275.49  Aligned_cols=314  Identities=10%  Similarity=0.036  Sum_probs=243.7

Q ss_pred             eEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCC---cchHHHHHHHHHHcCCC--CCCEEEeCCHHHHHHHHHHHhcCCCC
Q 014594           97 IVKIDANENPYGPPPEVREALGQLKFPYIYPD---PESRRLRAALAKDSGLE--SDHILVGCGADELIDLIMRCVLDPGD  171 (422)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~---~~~~~lr~~la~~~~~~--~~~i~~~~G~~~al~~~~~~l~~~gd  171 (422)
                      +++|+.|  |+++++++.+++.+.. .+.|+.   .+..++|+++++++|.+  ++++++|+|+++++..++++++++||
T Consensus         5 ~~~~~~g--p~~~~~~v~~a~~~~~-~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd   81 (366)
T 1m32_A            5 YLLLTPG--PLTTSRTVKEAMLFDS-CTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQD   81 (366)
T ss_dssp             CEECSSS--SCCCCHHHHHTTCCCC-CTTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTC
T ss_pred             cccccCC--CcCCCHHHHHHHhhhh-cCCCHHHHHHHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhcCCCC
Confidence            5778777  6778899999998732 244543   56789999999999932  24799999999999999999999999


Q ss_pred             EEEEcC-CCchh-HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-CCeEEEEeCCCCccCcCCCHHHHHHHHcC-C
Q 014594          172 KIVDCP-PTFTM-YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-KPKCIFLTSPNNPDGSIINDEDLLKILEM-P  247 (422)
Q Consensus       172 ~Vl~~~-p~y~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~  247 (422)
                      +|++.. ++|+. +...++..|++++.++.+.++.+|++++++++++. ++++|++++|+||||.+++.+++.++++. |
T Consensus        82 ~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~  161 (366)
T 1m32_A           82 KVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYG  161 (366)
T ss_dssp             CEEEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHT
T ss_pred             eEEEEeCCCccHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecCHHHHHHHHHHcC
Confidence            988776 56654 56677778999999998777789999999999753 68999999999999999999999999988 9


Q ss_pred             CeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc------------------
Q 014594          248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK------------------  309 (422)
Q Consensus       248 ~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~------------------  309 (422)
                      +++|+||+|..+.....    +...+.++++.|+||.++ ++.++||+++++++++.+....                  
T Consensus       162 ~~li~Dea~~~~~~~~~----~~~~~~di~~~s~~K~~~-~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (366)
T 1m32_A          162 KTYIVDAMSSFGGIPMD----IAALHIDYLISSANKCIQ-GVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNH  236 (366)
T ss_dssp             CEEEEECTTTTTTSCCC----TTTTTCSEEEEESSSTTC-CCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTT
T ss_pred             CEEEEECCccccCcCcc----ccccCccEEEecCccccc-CCCceEEEEECHHHHHhhcCCCCCccccHHHHHhhhcccC
Confidence            99999999985432111    222345689999999763 2335799999998876654321                  


Q ss_pred             --CCCCCcHHHHHHHHHHccCC-hH--HH-HHHHHHHHHHHHHHHHccCCCCccc-C---CCceEEEEEeCC--CCCHHH
Q 014594          310 --QPYNVSVAAEVAACAALQNP-IY--LE-VKEALIKERERLFKLLKDVPFLNPY-P---SYSNFILCEVTS--GMDAKK  377 (422)
Q Consensus       310 --~~~~~~~~~~~aa~~~L~~~-~~--~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p---~~~~f~~~~~~~--~~~~~~  377 (422)
                        ..++.+...+.++.++|+.. ++  ++ .+++++++++++.+.|++++ +.+. +   ..++++|+++++  +.+..+
T Consensus       237 ~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (366)
T 1m32_A          237 GKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALG-FNTLLDDELHSPIITAFYSPEDPQYRFSE  315 (366)
T ss_dssp             TCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCGGGBCSSEEEEECCCCTTCCHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHCC-CeeccCchhcCceEEEEEcCccCCCCHHH
Confidence              12567788777777777652 22  45 88899999999999999875 3432 3   245689999985  678899


Q ss_pred             HHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          378 LKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       378 ~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      +.+.|.++||.++++..+ .++++||+++   +.++++++.++|++
T Consensus       316 ~~~~l~~~gi~v~~~~~~-~~~~iRi~~~~~~~~~~i~~~~~~l~~  360 (366)
T 1m32_A          316 FYRRLKEQGFVIYPGKVS-QSDCFRIGNIGEVYAADITALLTAIRT  360 (366)
T ss_dssp             HHHHHHHTTEECEECCCS-SSCEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence            999999999999987654 4689999998   45666777666654

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=100.00  E-value=8.5e-34  Score=279.01  Aligned_cols=313  Identities=14%  Similarity=0.049  Sum_probs=245.5

Q ss_pred             CCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCCCCCC-EEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 014594          103 NENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESDH-ILVGCGADELIDLIMRCVLDPGDKIVDCPPT  179 (422)
Q Consensus       103 ~~~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~~~~~-i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~  179 (422)
                      +..|.++++++.+++.+....+.++..  ...+++++++++++.+.++ +++++|++++++.++++++++||+|+++.|+
T Consensus        18 ~pgp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~~   97 (411)
T 3nnk_A           18 GPGPINADPRVLRAMSSQLIGQYDPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFG   97 (411)
T ss_dssp             SSSCCCCCHHHHHHHTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECS
T ss_pred             cCCCCCCCHHHHHHhhccccccccHHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEecCC
Confidence            356788899999999874332333322  2578999999999987665 8899999999999999999999999999999


Q ss_pred             chh--HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCC
Q 014594          180 FTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY  256 (422)
Q Consensus       180 y~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay  256 (422)
                      |+.  +...++..|++++.++.+.++.+|++++++++++.++++|++++|+||||.+.+.+++.++|+. |+++|+||+|
T Consensus        98 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~  177 (411)
T 3nnk_A           98 RFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATA  177 (411)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTT
T ss_pred             chHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCc
Confidence            976  8888888999999999888888999999999975589999999999999999999999999987 9999999998


Q ss_pred             ccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc---------------------------
Q 014594          257 TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK---------------------------  309 (422)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~---------------------------  309 (422)
                      ......    ......+.++++.|++|.++ ++.++||+++++++++.+....                           
T Consensus       178 ~~~~~~----~~~~~~~~d~~~~s~~K~l~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~  252 (411)
T 3nnk_A          178 SLGGNP----LETDVWGLDAVSAGMQKCLG-GPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLG  252 (411)
T ss_dssp             TBTTBC----CCTTTTTCSEEECCSTTTTC-CCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHH
T ss_pred             ccCCcc----cchhccCCcEEEecCccccC-CCCceEEEEECHHHHHHHhhcccccccccccccccccCCCCcccccchH
Confidence            743211    11123345689999999743 3346899999999999887643                           


Q ss_pred             -----------CCCCCcHHHHHHHHHHccCC-hH-HH-HHHHHHHHHHHHHHHHccCCCCcccCC---CceEEEEEeCCC
Q 014594          310 -----------QPYNVSVAAEVAACAALQNP-IY-LE-VKEALIKERERLFKLLKDVPFLNPYPS---YSNFILCEVTSG  372 (422)
Q Consensus       310 -----------~~~~~~~~~~~aa~~~L~~~-~~-~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~~f~~~~~~~~  372 (422)
                                 ..++.+...+.++.++++.. ++ ++ .+++++++++++.+.|++++.....+.   .++++++.+|++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~  332 (411)
T 3nnk_A          253 MVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAMGLETFGDLKHKMNNVLGVVIPQG  332 (411)
T ss_dssp             HHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCSSEEEEECCTT
T ss_pred             HHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCEeCCCcccccccEEEEECCCC
Confidence                       12456777777777777642 22 55 888999999999999998854333333   367889999877


Q ss_pred             CCHHHHHHHHHhC-CcEEEeCCCCCCCCeEEEEe-c---ChhhHHHHHHHHhh
Q 014594          373 MDAKKLKDDLAKM-GVMIRHYNNKELKGYVRVSV-G---KPEHTDALMECLMH  420 (422)
Q Consensus       373 ~~~~~~~~~L~~~-gI~v~~~~~~~~~~~iRis~-~---~~~~~~~l~~al~~  420 (422)
                      .+.+++.+.|.++ ||.++++.....++++||++ +   +.++++++.++|++
T Consensus       333 ~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~  385 (411)
T 3nnk_A          333 INGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEA  385 (411)
T ss_dssp             CCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHH
Confidence            8899999999865 99999876545568999998 5   34555666655544

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=100.00  E-value=2.4e-34  Score=282.37  Aligned_cols=316  Identities=17%  Similarity=0.213  Sum_probs=246.6

Q ss_pred             CCCCeEEcCCCCCCCC--CCHHHHHHHhc-CC-CCC-----CCC---CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594           93 KPEDIVKIDANENPYG--PPPEVREALGQ-LK-FPY-----IYP---DPESRRLRAALAKDSGLESDHILVGCGADELID  160 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~--~~~~v~~al~~-~~-~~~-----~y~---~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~  160 (422)
                      ++.++|||+.+ ++++  +++++.+++.+ +. ++.     .|+   ..+..++|+++++++|++ ++|++++| ++++.
T Consensus        43 ~g~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG-s~a~~  119 (401)
T 1fc4_A           43 DGSHVINFCAN-NYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGME-DAILYSSC-FDANG  119 (401)
T ss_dssp             TSCEEEECCCS-CTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHTCS-EEEEESCH-HHHHH
T ss_pred             CCccEEEeecc-CcccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhCCC-cEEEeCCh-HHHHH
Confidence            45678999998 5676  48999888875 21 121     232   345789999999999986 56666555 67888


Q ss_pred             HHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCC
Q 014594          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSII  235 (422)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~  235 (422)
                      .++++++++||.|+++.|+|..+...++..|++++.++     ..|++++++.+++.     ++++|++++|+||||.++
T Consensus       120 ~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~  194 (401)
T 1fc4_A          120 GLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-----NNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIA  194 (401)
T ss_dssp             TTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEEC-----TTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEEC
T ss_pred             HHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEEC-----CCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCC
Confidence            89999999999999999999888778888999999987     35789999988631     789999999999999999


Q ss_pred             CHHHHHHHHcC-CCeEEEccCCc-cccC-CCc-hhhhhh-cCCcEEEEccChhhh-ccccccceeeecCHHHHHHHHHhc
Q 014594          236 NDEDLLKILEM-PILVVLDEAYT-EFSG-LES-RMEWVK-KHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRAK  309 (422)
Q Consensus       236 ~~e~l~~i~~~-~~~li~Deay~-~~~~-~~~-~~~~~~-~~~~~i~~~S~SK~~-~~~G~r~G~i~~~~~~~~~l~~~~  309 (422)
                      +.+++.++++. |+++|+||+|. ++.+ .+. .....+ ..+.+++++||||.+ +.+|   ||+++++++++.+....
T Consensus       195 ~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~g---G~~~~~~~~~~~l~~~~  271 (401)
T 1fc4_A          195 NLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASG---GYTAARKEVVEWLRQRS  271 (401)
T ss_dssp             CHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSC---EEEEECHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCC---EEEEcCHHHHHHHHHhC
Confidence            99999999987 99999999995 7753 222 222122 124579999999998 5444   99999999999887654


Q ss_pred             C----CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHh
Q 014594          310 Q----PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK  384 (422)
Q Consensus       310 ~----~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~  384 (422)
                      .    .++.+.+.+.++.++|+..+..+ .+++++++++++.+.|++++ +.+.++.++|+|++++++.+..++.+.|.+
T Consensus       272 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  350 (401)
T 1fc4_A          272 RPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAG-FTLAGADHAIIPVMLGDAVVAQKFARELQK  350 (401)
T ss_dssp             HHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTT-CCBCCSSSSEEEEEEECHHHHHHHHHHHHH
T ss_pred             cCceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CcccCCCCCEEEEEcCChHHHHHHHHHHHH
Confidence            2    35788999999988886533234 88889999999999999885 444578899999999754567889999999


Q ss_pred             CCcEEEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          385 MGVMIRHYNNKE---LKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       385 ~gI~v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      +||.++++..+.   ..+++||+++   +.++++++.++|++
T Consensus       351 ~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~  392 (401)
T 1fc4_A          351 EGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTR  392 (401)
T ss_dssp             TTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            999999876533   3468999998   55666666666554

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.5e-34  Score=282.54  Aligned_cols=316  Identities=15%  Similarity=0.128  Sum_probs=242.7

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhc-CCC-----CCCCC-----CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQ-LKF-----PYIYP-----DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~-----~~~y~-----~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~  164 (422)
                      +.+.|+.+.++ ++++++.+++.+ +..     ...|+     .....++|+++++++|+++++|++|+|+++++.++++
T Consensus        26 ~~~~ld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~~  104 (406)
T 3cai_A           26 GWVHFDAPAGM-LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAE  104 (406)
T ss_dssp             SCEECBGGGCC-CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHH
T ss_pred             CeEEEeCCCcC-CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHHHH
Confidence            47899988877 678889888875 211     11243     2346789999999999988899999999999999999


Q ss_pred             Hh---cCCCCEEEEcCCCchhHHHHHH----HcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594          165 CV---LDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (422)
Q Consensus       165 ~l---~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (422)
                      ++   +++||+|+++.|+|+.+...+.    ..|++++.++.+ +++.+|+++|++.++ +++++|++++|+||||.+++
T Consensus       105 ~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~  183 (406)
T 3cai_A          105 ASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLIS-KSTRLVAVNSASGTLGGVTD  183 (406)
T ss_dssp             HTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCC-TTEEEEEEESBCTTTCBBCC
T ss_pred             HHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhC-CCceEEEEeCCcCCccccCC
Confidence            87   7899999999999986544333    379999999976 667899999999997 68999999999999999999


Q ss_pred             HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccce-eeecCHHHHHHHHHhcC----
Q 014594          237 DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEYLWRAKQ----  310 (422)
Q Consensus       237 ~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G-~i~~~~~~~~~l~~~~~----  310 (422)
                      .++|.++++. |+++|+||+|........ .   ...+.++++.|+||.+| ++  +| |+++++++++.+.....    
T Consensus       184 l~~i~~l~~~~~~~li~D~a~~~g~~~~~-~---~~~~~d~~~~s~~K~~g-~~--~G~~~~~~~~~~~~l~~~~~~~~~  256 (406)
T 3cai_A          184 LRAMTKLVHDVGALVVVDHSAAAPYRLLD-I---RETDADVVTVNAHAWGG-PP--IGAMVFRDPSVMNSFGSVSTNPYA  256 (406)
T ss_dssp             CHHHHHHHHHTTCEEEEECTTTTTTCCCC-H---HHHCCSEEEEEGGGGTS-CS--CEEEEESCHHHHHTSCCCCSCTTC
T ss_pred             HHHHHHHHHHcCCEEEEEcccccCCCCCC-c---hhcCCCEEEeehhhhcC-CC--cCeEEEEehHHHhhcCCcccCCCC
Confidence            9999999987 999999999984321111 1   12245688999999776 44  89 99999998877654421    


Q ss_pred             -------CCCCcHHHHHHHHHHcc---CCh-------------HHH-HHHHHHHHHHHHHHHHccCCCCcccCC---Cce
Q 014594          311 -------PYNVSVAAEVAACAALQ---NPI-------------YLE-VKEALIKERERLFKLLKDVPFLNPYPS---YSN  363 (422)
Q Consensus       311 -------~~~~~~~~~~aa~~~L~---~~~-------------~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~~  363 (422)
                             .++.+...+.++.++++   ..+             +++ .+++++++++++.+.|++++.+.+.++   .++
T Consensus       257 ~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~  336 (406)
T 3cai_A          257 TGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIP  336 (406)
T ss_dssp             CGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCS
T ss_pred             CccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCC
Confidence                   34566666555544443   211             456 888999999999999998865554333   255


Q ss_pred             EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC---------CCCCCeEEEEecC---hhhHHHHHHHHhhh
Q 014594          364 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNN---------KELKGYVRVSVGK---PEHTDALMECLMHL  421 (422)
Q Consensus       364 f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~---------~~~~~~iRis~~~---~~~~~~l~~al~~l  421 (422)
                      ++++.++ +.+.+++.+.|.++||.++++..         ....+++||+++.   .++++++.++|+.+
T Consensus       337 ~~~~~~~-~~~~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~  405 (406)
T 3cai_A          337 VVSFAVH-KVPADRVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL  405 (406)
T ss_dssp             EEEEEET-TBCHHHHHHHHHHTTEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred             EEEEEEC-CcCHHHHHHHHHHCCcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence            8888887 46788999999999999998761         1135899999984   56677777777654

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=100.00  E-value=3.6e-34  Score=275.50  Aligned_cols=309  Identities=16%  Similarity=0.083  Sum_probs=239.7

Q ss_pred             CCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCCC--CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 014594          103 NENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLE--SDHILVGCGADELIDLIMRCVLDPGDKIVDCPP  178 (422)
Q Consensus       103 ~~~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~~--~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p  178 (422)
                      +.+|+++++++++++.+....+.|+..  ...++|+++++++|++  +++|++|+|+++++..+++++++  |+|+++.|
T Consensus         5 ~~gp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~~~~   82 (353)
T 2yrr_A            5 TPGPTPIPERVQKALLRPMRGHLDPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR--GPVLVLVN   82 (353)
T ss_dssp             SSSSCCCCHHHHGGGGSCCCCTTCHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEEEEC
T ss_pred             CCCCCCCCHHHHHHHhcccccccCHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEEEcC
Confidence            456778889999999874322455443  4789999999999985  67899999999999999998876  88999999


Q ss_pred             CchhH--HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccC
Q 014594          179 TFTMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA  255 (422)
Q Consensus       179 ~y~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Dea  255 (422)
                      .|+.+  ...++..|++++.++.++++.+|++++++.+++.++++|++++|+||||.+++.+++.++++. |+++|+||+
T Consensus        83 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a  162 (353)
T 2yrr_A           83 GAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAV  162 (353)
T ss_dssp             SHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECT
T ss_pred             CCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcC
Confidence            99875  455677899999999877778999999999974389999999999999999999999999988 999999999


Q ss_pred             CccccCCCchhhhhhcCCcEEEEccChhhh-ccccccceeeecCHHHHHHHH-----------------HhcCCCCCcHH
Q 014594          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLW-----------------RAKQPYNVSVA  317 (422)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~r~G~i~~~~~~~~~l~-----------------~~~~~~~~~~~  317 (422)
                      |..... +....   ..+..+++.|++|.+ +.+|  +||+++++++++.+.                 .....++.+..
T Consensus       163 ~~~~~~-~~~~~---~~~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (353)
T 2yrr_A          163 TTLGML-PFSMR---AMGVDYAFTGSQKCLSAPPG--LAPIAASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVL  236 (353)
T ss_dssp             TTTTTS-CCCHH---HHTCSEEECCTTSTTCCCSS--CEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHH
T ss_pred             cccccc-ccccc---ccCceEEEecCcccccCCCc--eEEEEECHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHH
Confidence            963322 11111   223347888999954 4455  799999999887653                 11223567777


Q ss_pred             HHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCcccCC---CceEEEEEeCCCCCHHHHHHHHHhCCcEEEe
Q 014594          318 AEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPYPS---YSNFILCEVTSGMDAKKLKDDLAKMGVMIRH  391 (422)
Q Consensus       318 ~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~  391 (422)
                      .+.++.++++..  ..++ .+++++++++++.+.|++++ +.+.++   .+++++++++.+.+.+++.+.|.++||.+++
T Consensus       237 ~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~  315 (353)
T 2yrr_A          237 LHYALLEALDLVLEEGVAARERRAREVYAWVLEELKARG-FRPYPKASPLPTVLVVRPPEGVDADRLVRALYAEGVAVAG  315 (353)
T ss_dssp             HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CEESCSSSBCTTEEEEECCTTCCHHHHHHHHHHTTEECEE
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCC-CccccCccCCCeEEEEECCCCCCHHHHHHHHHHCCEEEeC
Confidence            777777776542  2255 88899999999999998874 444332   4556789987677899999999999999999


Q ss_pred             CCCCCCCCeEEEEe---cChhhHH-HHHHHHhh
Q 014594          392 YNNKELKGYVRVSV---GKPEHTD-ALMECLMH  420 (422)
Q Consensus       392 ~~~~~~~~~iRis~---~~~~~~~-~l~~al~~  420 (422)
                      +..+..++++||++   .+.++++ ++.++|++
T Consensus       316 g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~  348 (353)
T 2yrr_A          316 GIGPTRGQVLRLGLMGEGARREAYQAFLKALDR  348 (353)
T ss_dssp             CCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHH
T ss_pred             CccccCCCeEEEecCccCCHHHHHHHHHHHHHH
Confidence            87655578999998   4566666 67676654

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=100.00  E-value=7.9e-34  Score=277.69  Aligned_cols=315  Identities=17%  Similarity=0.147  Sum_probs=241.8

Q ss_pred             eEEcCCCCCCCCCCHHHHHHHhcCCCCCCCC--CcchHHHHHHHHHHcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCEE
Q 014594           97 IVKIDANENPYGPPPEVREALGQLKFPYIYP--DPESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKI  173 (422)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~--~~~~~~lr~~la~~~~~~~~-~i~~~~G~~~al~~~~~~l~~~gd~V  173 (422)
                      .+.+.  .+++++++++.+++.+....+.++  .....++++++++++|++++ +|++|+|+++++..++++++++||+|
T Consensus        20 ~~~~~--~g~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~v   97 (393)
T 2huf_A           20 KLLMG--PGPSNAPQRVLDAMSRPILGHLHPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLLEDGDVI   97 (393)
T ss_dssp             CEECS--SSCCCCCHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCTTCEE
T ss_pred             eEEec--CCCCCCCHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHhCCCCEE
Confidence            35554  446778899999998743322222  23578999999999999776 89999999999999999999999999


Q ss_pred             EEcCCCchhHH--HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeE
Q 014594          174 VDCPPTFTMYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILV  250 (422)
Q Consensus       174 l~~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~l  250 (422)
                      +++.|+|+.+.  ..++..|++++.++.++++.+|++++++.+++.++++|++++|+||||.+++.+++.++++. |+++
T Consensus        98 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~l  177 (393)
T 2huf_A           98 LIGHTGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLL  177 (393)
T ss_dssp             EEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEE
T ss_pred             EEECCCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHHHHHHHcCCEE
Confidence            99999998743  34566899999999877778999999999973379999999999999999999999999987 9999


Q ss_pred             EEccCCccccCCCchhhhhhcCCcEEEEccChhh-hccccccceeeecCHHHHHHHHHhc---CC---------------
Q 014594          251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR-AGLAGLRVGYGAFPLSIIEYLWRAK---QP---------------  311 (422)
Q Consensus       251 i~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~~G~r~G~i~~~~~~~~~l~~~~---~~---------------  311 (422)
                      |+||+|.....   ... +...+.++++.|+||. +|++|+  ||+++++++++.+....   .+               
T Consensus       178 i~D~a~~~~~~---~~~-~~~~~~d~~~~s~sK~l~g~~G~--G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (393)
T 2huf_A          178 IVDTVASLGGA---PMF-MDRWEIDAMYTGSQKVLGAPPGI--TPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCF  251 (393)
T ss_dssp             EEECTTTBTTB---CCC-TTTTTCSEEECCSSSTTCCCSSC--EEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCS
T ss_pred             EEEcccccCCC---Ccc-hhhcCccEEEECCCcccccCCCe--EEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccc
Confidence            99999864221   111 2234567899999996 456775  99999999998887541   11               


Q ss_pred             -------CCCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCcccCC----CceEEEEEeCCCCCHHH
Q 014594          312 -------YNVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPYPS----YSNFILCEVTSGMDAKK  377 (422)
Q Consensus       312 -------~~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~----~~~f~~~~~~~~~~~~~  377 (422)
                             .+.+...+.++.++++..  ..++ .+++++++++++.+.|++++ +.+.++    .+.+++++++.+.+.++
T Consensus       252 ~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (393)
T 2huf_A          252 GRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAG-FELYADPKDRLSTVTTIKVPQGVDWLK  330 (393)
T ss_dssp             SSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCGGGBCTTEEEEECCTTCCHHH
T ss_pred             cccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcC-CeeccCccccCCcEEEEEcCCCCCHHH
Confidence                   245666777666676542  2355 88889999999999999885 443332    23588899876678899


Q ss_pred             HHHHHHh-CCcEEEeCCCCCCCCeEEEEe-c---ChhhHHHHHHHHhh
Q 014594          378 LKDDLAK-MGVMIRHYNNKELKGYVRVSV-G---KPEHTDALMECLMH  420 (422)
Q Consensus       378 ~~~~L~~-~gI~v~~~~~~~~~~~iRis~-~---~~~~~~~l~~al~~  420 (422)
                      +.+.|.+ +||.++++..+..++++||++ +   +.++++++.++|+.
T Consensus       331 ~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~  378 (393)
T 2huf_A          331 AAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQE  378 (393)
T ss_dssp             HHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHH
Confidence            9999985 599999877555578999999 4   34456666666654

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=100.00  E-value=8.5e-34  Score=277.08  Aligned_cols=314  Identities=13%  Similarity=0.108  Sum_probs=243.6

Q ss_pred             CCCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 014594          102 ANENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPP  178 (422)
Q Consensus       102 ~~~~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~~~~-~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p  178 (422)
                      .+.+|.++++++.+++.+....+.++..  ...+++++++++++.+.+ +|++|+|+++++..++++++++||+|+++.+
T Consensus        27 ~~p~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~~~  106 (393)
T 3kgw_A           27 LGPGPSNLAPRVLAAGSLRMIGHMQKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGTN  106 (393)
T ss_dssp             CSSSCCCCCHHHHHHTTCCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEEES
T ss_pred             ccCCCCCCCHHHHHHhcccccCcccHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEEeC
Confidence            4457778899999999873222334332  357899999999998655 5999999999999999999999999999999


Q ss_pred             Cch--hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccC
Q 014594          179 TFT--MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA  255 (422)
Q Consensus       179 ~y~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Dea  255 (422)
                      +|.  .+...++..|++++.++.+.++.+|++++++.++++++++|++++|+||||.+++.+++.++|+. |+++|+||+
T Consensus       107 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~  186 (393)
T 3kgw_A          107 GIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSV  186 (393)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECT
T ss_pred             CchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECC
Confidence            885  33667778999999999877778999999999985489999999999999999999999999987 999999999


Q ss_pred             CccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC-------------------------
Q 014594          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-------------------------  310 (422)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~-------------------------  310 (422)
                      |.......    .....+.++++.|+||.++ ++.++||+++++++++.+.....                         
T Consensus       187 ~~~g~~~~----~~~~~~~d~~~~s~sK~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (393)
T 3kgw_A          187 ASLGGVPI----YMDQQGIDIMYSSSQKVLN-APPGISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVI  261 (393)
T ss_dssp             TTTTTSCC----CTTTTTCCEEEEESSSTTC-CCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCC
T ss_pred             ccccCccc----chhhcCCCEEEecCccccc-CCCceeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCC
Confidence            87432111    1123345688899999764 33448999999999998875332                         


Q ss_pred             CCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC----ceEEEEEeCCCCCHHHHHHHHH
Q 014594          311 PYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGMDAKKLKDDLA  383 (422)
Q Consensus       311 ~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~f~~~~~~~~~~~~~~~~~L~  383 (422)
                      .++.+...+.++.++++.  .++++ .+++++++++++.+.|++++.....+..    +.++++.++++.+.+++.+.|.
T Consensus       262 ~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  341 (393)
T 3kgw_A          262 HHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVTVPAGYNWRDIVSYVL  341 (393)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCSSEEEEECCTTBCHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcCCeEEEEeCCCCCCHHHHHHHHH
Confidence            245677777777777663  23355 8889999999999999988532222322    4667889887788999999998


Q ss_pred             hC-CcEEEeCCCCCCCCeEEEEe-c---ChhhHHHHHHHHhh
Q 014594          384 KM-GVMIRHYNNKELKGYVRVSV-G---KPEHTDALMECLMH  420 (422)
Q Consensus       384 ~~-gI~v~~~~~~~~~~~iRis~-~---~~~~~~~l~~al~~  420 (422)
                      ++ ||.++++..+..++++||++ +   +.++++++.++|++
T Consensus       342 ~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~  383 (393)
T 3kgw_A          342 DHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALRE  383 (393)
T ss_dssp             HHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHH
T ss_pred             HhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHH
Confidence            76 99999987655678999998 5   45556666665554

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=100.00  E-value=2.8e-33  Score=275.72  Aligned_cols=311  Identities=13%  Similarity=0.025  Sum_probs=243.4

Q ss_pred             CCCCCCCHHHHHHHhcCCCCCCCCC---cchHHHHHHHHHHcCCCCCCEE-EeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 014594          104 ENPYGPPPEVREALGQLKFPYIYPD---PESRRLRAALAKDSGLESDHIL-VGCGADELIDLIMRCVLDPGDKIVDCPPT  179 (422)
Q Consensus       104 ~~~~~~~~~v~~al~~~~~~~~y~~---~~~~~lr~~la~~~~~~~~~i~-~~~G~~~al~~~~~~l~~~gd~Vl~~~p~  179 (422)
                      ..|.+.++.+.+++.+... ..|+.   ....+++++++++++.++++++ +++|+++++..++++++++||+|+++.|+
T Consensus        17 p~p~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~   95 (416)
T 3isl_A           17 PGPVEVDPRVLRVMSTPVV-GQFDPAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYG   95 (416)
T ss_dssp             SSSCCCCHHHHHHTTSCCC-CTTSHHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESS
T ss_pred             CCCcCcCHHHHHHhcccCC-CCccHHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecCC
Confidence            4567778999998877432 22321   2367899999999999877665 88999999999999999999999999999


Q ss_pred             chh--HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCC
Q 014594          180 FTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY  256 (422)
Q Consensus       180 y~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay  256 (422)
                      |+.  +...++..|++++.++.+.++.+|+++++++++++++++|++++|+||||.+++.+++.++++. |+++|+|++|
T Consensus        96 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~  175 (416)
T 3isl_A           96 RFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVA  175 (416)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTT
T ss_pred             cccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCc
Confidence            987  6677888999999999887788999999999975689999999999999999999999999987 9999999998


Q ss_pred             ccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc---------------------------
Q 014594          257 TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK---------------------------  309 (422)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~---------------------------  309 (422)
                      .......    .....+.++++.|++|.++ ++.++|++++++++++.+....                           
T Consensus       176 ~~~~~~~----~~~~~~~d~~~~s~~K~l~-g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~  250 (416)
T 3isl_A          176 TIGGCEV----KVDEWKIDAAIGGTQKCLS-VPSGMAPITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFD  250 (416)
T ss_dssp             TTTTSCC----CTTTTTCSEEECCSSSTTC-CCSSEEEEEECHHHHHHHHTC------------------CCCCSCSTTC
T ss_pred             cccCCCc----chhhcCCCEEEecCccccC-CCCCeEEEEECHHHHHHhhccccccccccccccchhccCCCCCCccccc
Confidence            7432211    1122345689999999643 3445899999999998876421                           


Q ss_pred             -------------CCCCCcHHHHHHHHHHccCC-hH-HH-HHHHHHHHHHHHHHHHccCCCCcccCCC---ceEEEEEeC
Q 014594          310 -------------QPYNVSVAAEVAACAALQNP-IY-LE-VKEALIKERERLFKLLKDVPFLNPYPSY---SNFILCEVT  370 (422)
Q Consensus       310 -------------~~~~~~~~~~~aa~~~L~~~-~~-~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~---~~f~~~~~~  370 (422)
                                   ..++.+...+.++.++++.. ++ ++ .+++++++++++.+.|++++.....+..   +.++++.++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~  330 (416)
T 3isl_A          251 LSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAMGLRLFGDDSCKMPVVTCVEIP  330 (416)
T ss_dssp             HHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCTTEEEEECC
T ss_pred             hHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCEeccCccccCCcEEEEeCC
Confidence                         12356777777777777642 33 55 8889999999999999987533233322   578889998


Q ss_pred             CCCCHHHHHHHHHhC-CcEEEeCCCCCCCCeEEEEe---cChhh-HHHHHHHHhh
Q 014594          371 SGMDAKKLKDDLAKM-GVMIRHYNNKELKGYVRVSV---GKPEH-TDALMECLMH  420 (422)
Q Consensus       371 ~~~~~~~~~~~L~~~-gI~v~~~~~~~~~~~iRis~---~~~~~-~~~l~~al~~  420 (422)
                      ++.+.+++.+.|.++ ||.++++..+..++++||++   .+.++ ++++.++|++
T Consensus       331 ~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~  385 (416)
T 3isl_A          331 GGIDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEA  385 (416)
T ss_dssp             TTCCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHH
Confidence            778899999999865 99999887655678999999   45555 6666666654

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=100.00  E-value=1.6e-33  Score=273.71  Aligned_cols=311  Identities=16%  Similarity=0.111  Sum_probs=231.9

Q ss_pred             EEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCc----------chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 014594           98 VKIDANENPYGPPPEVREALGQ-LKFPYIYPDP----------ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (422)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~----------~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l  166 (422)
                      +.|+.+.+ .++++.+.+++.+ +.....+|..          ...++++++++++++++++|++|+|+++++..+++++
T Consensus         2 iyld~~~~-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~   80 (382)
T 4hvk_A            2 AYFDYTSA-KPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGY   80 (382)
T ss_dssp             CBCBTTTC-CCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHH
T ss_pred             EeecCCCc-CCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHh
Confidence            45555544 3567888888876 2221222221          2348999999999998889999999999999999988


Q ss_pred             c----CCCCEEEEcCCCchhHHHHHHH---cCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594          167 L----DPGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (422)
Q Consensus       167 ~----~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~  239 (422)
                      +    ++||+|+++.++|+.+...+..   .|++++.++.++++.+|+++++++++ +++++|++++|+||||.+++.++
T Consensus        81 ~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~~~~  159 (382)
T 4hvk_A           81 AMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLR-DDTILVSVQHANNEIGTIQPVEE  159 (382)
T ss_dssp             HHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCC-TTEEEEECCSBCTTTCBBCCHHH
T ss_pred             hhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhc-cCceEEEEECCCCCceeeCCHHH
Confidence            7    9999999999999987665444   69999999987788899999999997 68999999999999999999999


Q ss_pred             HHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh---------c
Q 014594          240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---------K  309 (422)
Q Consensus       240 l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~---------~  309 (422)
                      +.++++. |+ +|+|++|........    ....+.++++.|+||.+|.+|  +|+++++++.  .+...         .
T Consensus       160 i~~l~~~~~~-li~D~a~~~~~~~~~----~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~--~~~~~~~~~~~~~~~  230 (382)
T 4hvk_A          160 ISEVLAGKAA-LHIDATASVGQIEVD----VEKIGADMLTISSNDIYGPKG--VGALWIRKEA--KLQPVILGGGQENGL  230 (382)
T ss_dssp             HHHHHSSSSE-EEEECTTTBTTBCCC----HHHHTCSEEEEESGGGTSCTT--CEEEEEETTC--CCCCSSCSSCTGGGT
T ss_pred             HHHHHHHcCE-EEEEhHHhcCCCCCC----chhcCCCEEEEeHHHhcCCCc--eEEEEEcCcc--CcCcccccCCCcCcc
Confidence            9999998 99 999999874321111    112244589999999877555  7777776543  11111         1


Q ss_pred             CCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC----ceEEEEEeCCCCCHHHHHHHHH
Q 014594          310 QPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGMDAKKLKDDLA  383 (422)
Q Consensus       310 ~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~f~~~~~~~~~~~~~~~~~L~  383 (422)
                      ..++.+...+.++.++++. .++++ .+++++++++++.+.|++++.+.+.+..    .+++++.++ +.+.+++.+.|.
T Consensus       231 ~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~  309 (382)
T 4hvk_A          231 RSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS-YIEGESIVLSLD  309 (382)
T ss_dssp             SCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET-TCCHHHHHHHHH
T ss_pred             ccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEEC-CCCHHHHHHHHH
Confidence            1344566777766666653 24556 8889999999999999988666544332    357788886 568899999999


Q ss_pred             hCCcEEEeCCCCCC-------------------CCeEEEEec---ChhhHHHHHHHHhh
Q 014594          384 KMGVMIRHYNNKEL-------------------KGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       384 ~~gI~v~~~~~~~~-------------------~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      ++||.++++..+..                   ++++||+++   +.++++++.++|++
T Consensus       310 ~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~  368 (382)
T 4hvk_A          310 MAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPG  368 (382)
T ss_dssp             HTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             HCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHH
Confidence            99999998754211                   589999998   55666777666654

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=100.00  E-value=4.5e-33  Score=273.73  Aligned_cols=305  Identities=16%  Similarity=0.119  Sum_probs=229.2

Q ss_pred             EEcCCCCCCCCCCHHHHH----HHh---cCCCCCCCCCcc---hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhc
Q 014594           98 VKIDANENPYGPPPEVRE----ALG---QLKFPYIYPDPE---SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL  167 (422)
Q Consensus        98 i~l~~~~~~~~~~~~v~~----al~---~~~~~~~y~~~~---~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~  167 (422)
                      ..++.+++++.+++.+.+    ++.   .-...+.|+..+   ..++++++++++|.+  ++++++|+++++..++++++
T Consensus        21 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~~~~l~~~ia~~~g~~--~~i~~~~g~~ai~~~~~~l~   98 (404)
T 1e5e_A           21 QFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKTE--ACVATSSGMGAIAATVLTIL   98 (404)
T ss_dssp             TTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHC
T ss_pred             CCCCcCCCCcCCCccccCCHHHHHHhhcCCcCCccccCCcChHHHHHHHHHHHHhCCC--cEEEeCChHHHHHHHHHHHh
Confidence            456777888876654433    332   112235575544   348999999999974  78888888999999999999


Q ss_pred             CCCCEEEEcCCCchhHHH----HHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594          168 DPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (422)
Q Consensus       168 ~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i  243 (422)
                      ++||+|+++.|+|+.+..    .++..|++++.++.+     |++++++.++ +++++|++++|+||||.+++.+++.++
T Consensus        99 ~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~-~~t~~v~l~~p~NptG~v~~l~~i~~l  172 (404)
T 1e5e_A           99 KAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-----IPGEVKKHMK-PNTKIVYFETPANPTLKIIDMERVCKD  172 (404)
T ss_dssp             CTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-----STTHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             CCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcC-CCCcEEEEECCCCCCCcccCHHHHHHH
Confidence            999999999999998877    677899999999864     7899999997 689999999999999999999999999


Q ss_pred             HcC--CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccc-eeeecCHHHHH-HHHHhcCCC---CCcH
Q 014594          244 LEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRV-GYGAFPLSIIE-YLWRAKQPY---NVSV  316 (422)
Q Consensus       244 ~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~-G~i~~~~~~~~-~l~~~~~~~---~~~~  316 (422)
                      ++.  |+++|+||+|.++.+.. ..    ..++++++.|+||.++++|+|+ ||+++++++++ .+......+   +.++
T Consensus       173 a~~~~~~~li~De~~~~~~~~~-~~----~~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~~g~~~~~  247 (404)
T 1e5e_A          173 AHSQEGVLVIADNTFCSPMITN-PV----DFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGSVISP  247 (404)
T ss_dssp             HHTSTTCEEEEECTTTCTTTCC-GG----GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCCCCCH
T ss_pred             HHhhcCCEEEEECCCchhhhCC-cc----ccCCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhCCCCCCCH
Confidence            975  89999999999877532 21    2367799999999999999998 99999999988 787766554   5788


Q ss_pred             HHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCC--------------ccc----CCCceEEEEEeCCCCCHHHH
Q 014594          317 AAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFL--------------NPY----PSYSNFILCEVTSGMDAKKL  378 (422)
Q Consensus       317 ~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~--------------~~~----p~~~~f~~~~~~~~~~~~~~  378 (422)
                      +.+.++.++|+...  ...++..++.+.+.+.|++.+.+              .+.    ...++|+.+++++  ..+.+
T Consensus       248 ~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~--~~~~~  323 (404)
T 1e5e_A          248 HDAWLITRGLSTLN--IRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKS--GFEGA  323 (404)
T ss_dssp             HHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETT--HHHHH
T ss_pred             HHHHHHHHhHhHHH--HHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCC--CHHHH
Confidence            89998888887521  14555566677777777655311              111    1136676668863  13455


Q ss_pred             HHHHHhCCcEEEeCCC-------------------------CCC-CCeEEEEecChhhHHHHHHHHhh
Q 014594          379 KDDLAKMGVMIRHYNN-------------------------KEL-KGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       379 ~~~L~~~gI~v~~~~~-------------------------~~~-~~~iRis~~~~~~~~~l~~al~~  420 (422)
                      .+.|.+.||.+...+.                         .+. ++++|||++. ++++++.+.|++
T Consensus       324 ~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~-e~~~~li~~l~~  390 (404)
T 1e5e_A          324 KKLLDNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI-EDADELIADFKQ  390 (404)
T ss_dssp             HHHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS-SCHHHHHHHHHH
T ss_pred             HHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC-CCHHHHHHHHHH
Confidence            5666688995553210                         011 5899999998 667888877765

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=100.00  E-value=2.5e-33  Score=276.87  Aligned_cols=317  Identities=15%  Similarity=0.103  Sum_probs=242.9

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-----------chHHHHHHHHHHcCCCCCCEEEeCCHHHH
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-----------ESRRLRAALAKDSGLESDHILVGCGADEL  158 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~y~~~-----------~~~~lr~~la~~~~~~~~~i~~~~G~~~a  158 (422)
                      ++.+.+.|+.+.+. ++++++.+++.+. .  ..+.+|..           ...++++++++++++++++|++|+|++++
T Consensus        19 ~~~~~iyld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a   97 (423)
T 3lvm_A           19 AMKLPIYLDYSATT-PVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATES   97 (423)
T ss_dssp             -CCSSEECBTTTCC-CCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHH
T ss_pred             ccCCCEeecCCCcC-CCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHHH
Confidence            45678999988776 6789999999873 3  22222221           23689999999999988999999999999


Q ss_pred             HHHHHHHhcC----CCCEEEEcCCCchhHHHHH---HHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCcc
Q 014594          159 IDLIMRCVLD----PGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD  231 (422)
Q Consensus       159 l~~~~~~l~~----~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt  231 (422)
                      +.++++++++    +||+|+++.|+|+.+...+   ...|++++.++.+.++.+|+++++++++ +++++|++++|+|||
T Consensus        98 ~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~npt  176 (423)
T 3lvm_A           98 DNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMR-DDTILVSIMHVNNEI  176 (423)
T ss_dssp             HHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCC-TTEEEEECCSBCTTT
T ss_pred             HHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcC-CCcEEEEEeCCCCCC
Confidence            9999998874    7999999999999887666   4469999999988888899999999997 689999999999999


Q ss_pred             CcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc-
Q 014594          232 GSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK-  309 (422)
Q Consensus       232 G~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~-  309 (422)
                      |.+++.++|.++|+. |+++|+||+|......    ......+.++++.|+||.+|.+|  +||++++++..+.+.... 
T Consensus       177 G~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~----~~~~~~~~di~~~s~sK~~g~~g--~G~~~~~~~~~~~~~~~~~  250 (423)
T 3lvm_A          177 GVVQDIAAIGEMCRARGIIYHVDATQSVGKLP----IDLSQLKVDLMSFSGHKIYGPKG--IGALYVRRKPRVRIEAQMH  250 (423)
T ss_dssp             CBBCCHHHHHHHHHHHTCEEEEECTTTTTTSC----CCTTTSCCSEEEEESTTTTSCSS--CEEEEECBTTBCCCCCSSC
T ss_pred             ccccCHHHHHHHHHHcCCEEEEEhhhhcCCCC----cChhhcCCCEEEechHHhcCCCC--eEEEEEeccccCCCCcccc
Confidence            999999999999987 9999999998753221    11223345689999999887666  899999887666554332 


Q ss_pred             --------CCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC----ceEEEEEeCCCCCH
Q 014594          310 --------QPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGMDA  375 (422)
Q Consensus       310 --------~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~f~~~~~~~~~~~  375 (422)
                              ..++.+...+.++.++++. .++++ .+++++++++++.+.|++++.+.+.+..    +.++++.++ +.+.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  329 (423)
T 3lvm_A          251 GGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFN-YVEG  329 (423)
T ss_dssp             SSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEET-TSCH
T ss_pred             CCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEeC-CCCH
Confidence                    2345677777777666654 23456 8889999999999999988656544333    356777775 6688


Q ss_pred             HHHHHHHHhCCcEEEeCCCCCC-------------------CCeEEEEec---ChhhHHHHHHHHhh
Q 014594          376 KKLKDDLAKMGVMIRHYNNKEL-------------------KGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       376 ~~~~~~L~~~gI~v~~~~~~~~-------------------~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      .++.+.|.+  |.++++..+..                   .+++||+++   +.++++++.++|++
T Consensus       330 ~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~  394 (423)
T 3lvm_A          330 ESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRK  394 (423)
T ss_dssp             HHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHH
Confidence            889888866  88877653211                   489999998   55666666666654

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=100.00  E-value=1.5e-33  Score=279.23  Aligned_cols=317  Identities=15%  Similarity=0.089  Sum_probs=243.8

Q ss_pred             CCCCeEEcCCCCC-CCCCCHHHHHHHhc-CC-CCCCCC--------CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           93 KPEDIVKIDANEN-PYGPPPEVREALGQ-LK-FPYIYP--------DPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~~-~~~~y~--------~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      ++.++|||+.|.+ .+.++|++.+++.+ +. ++..|+        .....++++++++++|.+  +.++++++++++..
T Consensus        62 ~g~~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~  139 (427)
T 2w8t_A           62 RGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYGTT--GAIVFSTGYMANLG  139 (427)
T ss_dssp             TTEEEEECSCCCTTCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHH
T ss_pred             CCceEEEEECcccccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhCCC--ceEEecCcHHHHHH
Confidence            4567899999974 33578889888765 21 111111        234689999999999974  55666666779999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC---CCeEEEEeCCCCccCcCCCHH
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE---KPKCIFLTSPNNPDGSIINDE  238 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~---~~~~i~l~~p~NPtG~~~~~e  238 (422)
                      ++++++++||.|+++.|+|..+...++..|++++.++     ..|++.|++.+++.   ++++|++++++||||.+++.+
T Consensus       140 al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~-----~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~  214 (427)
T 2w8t_A          140 IISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFR-----HNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLK  214 (427)
T ss_dssp             HHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEEC-----TTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECCHH
T ss_pred             HHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeC-----CCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHH
Confidence            9999999999999999999999999999999999987     36899999999742   789999999999999999999


Q ss_pred             HHHHHHcC-CCeEEEccCCccccCCC---chhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc----
Q 014594          239 DLLKILEM-PILVVLDEAYTEFSGLE---SRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK----  309 (422)
Q Consensus       239 ~l~~i~~~-~~~li~Deay~~~~~~~---~~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~----  309 (422)
                      +|.++++. |+++|+||+|..+..+.   ......+ ..+.++++.||||.+|++|   ||+++++++++.+....    
T Consensus       215 ~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~~l~~~l~~~~~~~~  291 (427)
T 2w8t_A          215 EMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNHPKFEAVRLACRPYI  291 (427)
T ss_dssp             HHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECCTTGGGGGGTCHHHH
T ss_pred             HHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeCHHHHHHHHHhccccc
Confidence            99999987 99999999999876432   2222222 2345799999999998766   99999998888775442    


Q ss_pred             CCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCccc-CC-CceEEEEEeCCCCCHHHHHHHHHhCC
Q 014594          310 QPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPY-PS-YSNFILCEVTSGMDAKKLKDDLAKMG  386 (422)
Q Consensus       310 ~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p~-~~~f~~~~~~~~~~~~~~~~~L~~~g  386 (422)
                      ..++.++..+.++.++|+..+..+ .+++++++++++.+.|++++ +.+. +. .++++|+.+++..+..++.+.|.++|
T Consensus       292 ~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G  370 (427)
T 2w8t_A          292 FTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAMG-FRLGTETCDSAIVAVMLEDQEQAAMMWQALLDGG  370 (427)
T ss_dssp             SSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHT-CEESCSSCCSSEEEEEESSHHHHHHHHHHHHHTT
T ss_pred             ccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CcccCCCCCCCEEEEEECCHHHHHHHHHHHHHCC
Confidence            234677777777777776533334 88899999999999998875 3433 55 77899999975445788999999999


Q ss_pred             cEEEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          387 VMIRHYNNKE---LKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       387 I~v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      |.+.++..+.   ..+++||+++   +.++++++.++|++
T Consensus       371 i~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~  410 (427)
T 2w8t_A          371 LYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQA  410 (427)
T ss_dssp             EECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             eEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHH
Confidence            9999876532   3469999998   45556666665543

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=100.00  E-value=2.2e-33  Score=273.20  Aligned_cols=313  Identities=16%  Similarity=0.118  Sum_probs=235.2

Q ss_pred             EEcCCCCCCCCCCHHHHHHHhc-CCC--C--C-CCCC-----cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 014594           98 VKIDANENPYGPPPEVREALGQ-LKF--P--Y-IYPD-----PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (422)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~-~~~--~--~-~y~~-----~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l  166 (422)
                      +.|+.+.+. ++++.+++++.+ +..  .  . .|+.     ....++|+++++++|+++++|++|+|+++++.++++++
T Consensus         2 ~yld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l   80 (382)
T 4eb5_A            2 AYFDYTSAK-PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGY   80 (382)
T ss_dssp             CBCBTTTCC-CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHH
T ss_pred             eeeccCCCC-CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHH
Confidence            456665554 578899988876 221  1  1 1421     23678999999999998889999999999999999998


Q ss_pred             c----CCCCEEEEcCCCchhHHHHHHH---cCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594          167 L----DPGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (422)
Q Consensus       167 ~----~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~  239 (422)
                      .    ++||+|+++.|+|+.+...+..   .|++++.++.++++.+|++++++.++ +++++|++++|+||||.+++.++
T Consensus        81 ~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~  159 (382)
T 4eb5_A           81 AMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLR-DDTILVSVQHANNEIGTIQPVEE  159 (382)
T ss_dssp             HHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCC-TTEEEEECCSBCTTTCBBCCHHH
T ss_pred             HhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhc-CCCeEEEEeccCCCccccCCHHH
Confidence            7    8999999999999987666543   69999999987777899999999997 68999999999999999999999


Q ss_pred             HHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHH-HHHHH------HhcCC
Q 014594          240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-IEYLW------RAKQP  311 (422)
Q Consensus       240 l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~-~~~l~------~~~~~  311 (422)
                      +.++++. |++ |+||+|.... .+..   +...+.++++.|+||.+|.+|  +||++++++. +....      .....
T Consensus       160 i~~l~~~~~~~-i~D~a~~~g~-~~~~---~~~~~~di~~~s~sK~~g~~g--~G~~~~~~~~~l~~~~~~~~~~~~~~~  232 (382)
T 4eb5_A          160 ISEVLAGKAAL-HIDATASVGQ-IEVD---VEKIGADMLTISSNDIYGPKG--VGALWIRKEAKLQPVILGGGQENGLRS  232 (382)
T ss_dssp             HHHHHTTSSEE-EEECTTTBTT-BCCC---HHHHTCSEEEEETGGGTCCSS--CEEEEEETTCCCCCSSCSSCTGGGTSC
T ss_pred             HHHHHHHCCCE-EEEcchhcCC-cccC---ccccCCCEEEeehHHhcCCCc--eEEEEEccccccCceecCCCccccccC
Confidence            9999998 999 9999998321 1111   112245688999999877656  7999987763 21110      11123


Q ss_pred             CCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC----ceEEEEEeCCCCCHHHHHHHHHhC
Q 014594          312 YNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGMDAKKLKDDLAKM  385 (422)
Q Consensus       312 ~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~f~~~~~~~~~~~~~~~~~L~~~  385 (422)
                      ++.+...+.++.++++. .++++ ++++++++++++.+.|++++.+.+.++.    ++++++.++ +.+.+++.+.|.++
T Consensus       233 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~  311 (382)
T 4eb5_A          233 GSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS-YIEGESIVLSLDMA  311 (382)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET-TSCHHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeC-CcCHHHHHHHHHHC
Confidence            45666666666666653 23455 8889999999999999988555543332    568888887 56889999999999


Q ss_pred             CcEEEeCCCC--------------C-----CCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          386 GVMIRHYNNK--------------E-----LKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       386 gI~v~~~~~~--------------~-----~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      ||.++++..+              +     .++++||+++   +.++++++.++|+.
T Consensus       312 gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~  368 (382)
T 4eb5_A          312 GIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPG  368 (382)
T ss_dssp             TCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence            9999987531              1     2579999998   45666666666554

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=100.00  E-value=5e-34  Score=277.44  Aligned_cols=308  Identities=13%  Similarity=0.155  Sum_probs=234.0

Q ss_pred             CCCCeEEcCCCC--CCCC-CCHHHHHHHhcC-C----CCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594           93 KPEDIVKIDANE--NPYG-PPPEVREALGQL-K----FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (422)
Q Consensus        93 ~~~~~i~l~~~~--~~~~-~~~~v~~al~~~-~----~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~  164 (422)
                      .+..++||+.+.  ++++ +++.+.+++.+. .    ....|+.++..++++++++++|+ +++|++++|+++++..+++
T Consensus        26 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~l~~~la~~~g~-~~~v~~~~g~t~a~~~~~~  104 (375)
T 2eh6_A           26 EGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLYENPWQEELAHKLVKHFWT-EGKVFFANSGTESVEAAIK  104 (375)
T ss_dssp             TCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCTTBCCHHHHHHHHHHHHTSSS-CEEEEEESSHHHHHHHHHH
T ss_pred             CCCEEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCcccCCHHHHHHHHHHHhhcCC-CCeEEEeCchHHHHHHHHH
Confidence            456789998875  5777 889998888752 1    12467777788999999999998 4899999999999999987


Q ss_pred             H---hc---CCC-CEEEEcCCCchhHHHHHHHcCCE-------------EEEecCCCCCCCCHHHHHHHhhcCCCeEEEE
Q 014594          165 C---VL---DPG-DKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSDFSLNVELIADAVEREKPKCIFL  224 (422)
Q Consensus       165 ~---l~---~~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l  224 (422)
                      .   ++   ++| |+|++++|+|+.+...+...+..             +..++.     .|+++++++++ +++++|++
T Consensus       105 ~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~~~v~~  178 (375)
T 2eh6_A          105 LARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-----NDIDSVYKLLD-EETAGIII  178 (375)
T ss_dssp             HHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-----TCHHHHHTTCC-TTEEEEEE
T ss_pred             HHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-----chHHHHHHHhc-CCeEEEEE
Confidence            5   35   788 99999999998776555443322             333331     58999999997 68999999


Q ss_pred             eCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceeeec
Q 014594          225 TSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (422)
Q Consensus       225 ~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~  297 (422)
                      ++|+||||.+.+    .+++.++++. |+++|+||+|.+|...+..  ....+...+++   ||||.++ +|+|+||+++
T Consensus       179 ~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~---s~SK~~~-~g~~~G~~~~  254 (375)
T 2eh6_A          179 EVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVI---ALAKGLG-GGVPIGAILA  254 (375)
T ss_dssp             CSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG-TTSCCEEEEE
T ss_pred             eCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEE---EEccccc-CCCCeEEEEE
Confidence            999999999976    5666666665 9999999999987643321  22222223433   7889998 7999999999


Q ss_pred             CHHHHHHHHH--hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCH
Q 014594          298 PLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDA  375 (422)
Q Consensus       298 ~~~~~~~l~~--~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~  375 (422)
                      ++++++.+..  ....++.+++.+.++.++|+..+  +..++++++++++.+.|++++. ...++.++|+|++++.  +.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~~~-~~~~~~g~~~~~~~~~--~~  329 (375)
T 2eh6_A          255 REEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVE--KLLPHVREVGNYFKEKLKELGK-GKVKGRGLMLGLELER--EC  329 (375)
T ss_dssp             EHHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHTTS-SEEEEETTEEEEECSS--CC
T ss_pred             cHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhc-CCceEEEEEEEEEEcC--cH
Confidence            9988877655  33456778888888888886533  4677888899999999988764 3345678999999973  56


Q ss_pred             HHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          376 KKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       376 ~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      .++.+.|.++||.++++.    ++++||+++   +.++++++.++|++
T Consensus       330 ~~~~~~l~~~gi~~~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~  373 (375)
T 2eh6_A          330 KDYVLKALEKGLLINCTA----GKVLRFLPPLIIQKEHIDRAISVLRE  373 (375)
T ss_dssp             HHHHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence            789999999999999864    589999965   45555666665554

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=100.00  E-value=1.1e-33  Score=277.63  Aligned_cols=317  Identities=18%  Similarity=0.127  Sum_probs=239.2

Q ss_pred             CCCeEEcCCCCC-CCCCCHHHHHHHhcC----CC-----CCCCCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           94 PEDIVKIDANEN-PYGPPPEVREALGQL----KF-----PYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        94 ~~~~i~l~~~~~-~~~~~~~v~~al~~~----~~-----~~~y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      +++++++..+++ +++++|++.+++.+.    ..     ...|+.. +..++|++++++++. +++|++++|++ ++..+
T Consensus        45 g~~~i~~~~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~~~i~~~sG~~-a~~~~  122 (401)
T 2bwn_A           45 KQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQK-EAALVFSSAYN-ANDAT  122 (401)
T ss_dssp             EEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTC-SEEEEESCHHH-HHHHH
T ss_pred             CCcEEEeeCCCcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCC-CcEEEECCcHH-HHHHH
Confidence            355788888776 666788888888652    11     1234443 678999999999996 57888888877 77777


Q ss_pred             HHHhc--CCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---CCCeEEEEeCCCCccCcCCCH
Q 014594          163 MRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIIND  237 (422)
Q Consensus       163 ~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~  237 (422)
                      +..++  .+||.|+++.|+|+.+...++..|++++.++.+     |++.+++.+++   +++++|++++|+||||.+++.
T Consensus       123 ~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l  197 (401)
T 2bwn_A          123 LSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-----DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPI  197 (401)
T ss_dssp             HHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-----CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCH
T ss_pred             HHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC-----CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCH
Confidence            66553  589999999999999988888899999999853     78899888863   478999999999999999999


Q ss_pred             HHHHHHHcC-CCeEEEccCCccccCC--Cc-hhhhhhc-CCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC-
Q 014594          238 EDLLKILEM-PILVVLDEAYTEFSGL--ES-RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-  311 (422)
Q Consensus       238 e~l~~i~~~-~~~li~Deay~~~~~~--~~-~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~-  311 (422)
                      +++.++|+. |+++|+||+|..+.++  +. .....+. .+.+++++||||.++++|   ||+++++++++.+...... 
T Consensus       198 ~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~~~~~  274 (401)
T 2bwn_A          198 KEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAASARMVDAVRSYAPGF  274 (401)
T ss_dssp             HHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEECHHHHHHHHHHCHHH
T ss_pred             HHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecCHHHHHHHHHhCcCc
Confidence            999999987 9999999999954322  21 1211111 123688999999999888   9999999998887654322 


Q ss_pred             ---CCCcHHHHHHHHHHccCCh--HHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-h
Q 014594          312 ---YNVSVAAEVAACAALQNPI--YLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-K  384 (422)
Q Consensus       312 ---~~~~~~~~~aa~~~L~~~~--~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~  384 (422)
                         .+.+++.+.++.++++..+  ..+ .+++++++++++.+.|++++ +.+.++.++++|++++++.+..++.+.|. +
T Consensus       275 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~  353 (401)
T 2bwn_A          275 IFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALG-MPIIDHGSHIVPVVIGDPVHTKAVSDMLLSD  353 (401)
T ss_dssp             HTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHT-CCBCCCSSSCEEEECCCHHHHHHHHHHHHHH
T ss_pred             eecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHCC-CcccCCCCCeEEEEeCChHHHHHHHHHHHhc
Confidence               2345577777777775422  234 88889999999999998874 44445556799999975456778999996 8


Q ss_pred             CCcEEEeCCCCCC---CCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          385 MGVMIRHYNNKEL---KGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       385 ~gI~v~~~~~~~~---~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      +||.++++..++.   .+++||+++   +.++++++.++|+++
T Consensus       354 ~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~  396 (401)
T 2bwn_A          354 YGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLL  396 (401)
T ss_dssp             HCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred             CCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHH
Confidence            8999998765432   369999998   566677777766643

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=100.00  E-value=9.9e-33  Score=269.57  Aligned_cols=306  Identities=19%  Similarity=0.134  Sum_probs=234.8

Q ss_pred             CCCCHHHHHHHhc-CCCCCCCCC--cc----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCC----------
Q 014594          107 YGPPPEVREALGQ-LKFPYIYPD--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDP----------  169 (422)
Q Consensus       107 ~~~~~~v~~al~~-~~~~~~y~~--~~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~----------  169 (422)
                      .+++|++.+++.+ +......+.  ++    ..++++++++++++++++|++|+|+++++..++++++.+          
T Consensus        40 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~  119 (397)
T 3f9t_A           40 SNVLPITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLS  119 (397)
T ss_dssp             CCCCTHHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCcHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhccc
Confidence            3456788888876 332111111  11    346889999999999999999999999999999988776          


Q ss_pred             ---CCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC
Q 014594          170 ---GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM  246 (422)
Q Consensus       170 ---gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~  246 (422)
                         ||+|+++.|+|..+...++..|++++.++.++++.+|++++++.+++.++++|++++|+||||.+.+.+++.++|+.
T Consensus       120 ~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~  199 (397)
T 3f9t_A          120 KNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKE  199 (397)
T ss_dssp             CCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHH
T ss_pred             CCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHH
Confidence               89999999999999999999999999999888888999999999984489999999999999999999999999998


Q ss_pred             -CCeEEEccCCccccCC--Cc--------hhhhhhcCCcEEEEccChhhhccccccceeeecCHH-HHHHHHHhcCC---
Q 014594          247 -PILVVLDEAYTEFSGL--ES--------RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLWRAKQP---  311 (422)
Q Consensus       247 -~~~li~Deay~~~~~~--~~--------~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~-~~~~l~~~~~~---  311 (422)
                       |+++|+||+|..+...  +.        ....... +..+++.|++|.++ +|.|+|+++++++ +.+.+......   
T Consensus       200 ~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~  277 (397)
T 3f9t_A          200 NNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGH-CPIPSGGILFKDIGYKRYLDVDAPYLTE  277 (397)
T ss_dssp             HTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTC-CCSSCEEEEESSGGGGGGTCEECTTSSS
T ss_pred             hCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccccC-CCCCceEEEEeCHHHHHhhccCCccccC
Confidence             9999999999865421  10        0111122 45688999999654 7889999988654 44433221111   


Q ss_pred             ----------CCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHH
Q 014594          312 ----------YNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDD  381 (422)
Q Consensus       312 ----------~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~  381 (422)
                                ...+...+.++...+....+.+..++++++++++.+.|++++...+.++.+++++++++   +..++.+.
T Consensus       278 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~  354 (397)
T 3f9t_A          278 TRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKENNFKPVIEPILNIVAIEDE---DYKEVCKK  354 (397)
T ss_dssp             SEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEEEEECT---THHHHHHH
T ss_pred             CCccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEcCCCccEEEEEeC---CHHHHHHH
Confidence                      11255667777776654333338888889999999999988644456778889999886   37889999


Q ss_pred             HHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          382 LAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       382 L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      |.++||.++++..   ++++||+++   +.++++++.++|++
T Consensus       355 l~~~gi~v~~~~~---~~~~Ri~~~~~~~~e~i~~~~~~l~~  393 (397)
T 3f9t_A          355 LRDRGIYVSVCNC---VKALRIVVMPHIKREHIDNFIEILNS  393 (397)
T ss_dssp             HHHTTCBCEECSS---SSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             HHhCCeEEeccCC---CCEEEEEEcCCCCHHHHHHHHHHHHH
Confidence            9999999998763   589999998   55666666666654

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=100.00  E-value=3e-33  Score=269.08  Aligned_cols=311  Identities=17%  Similarity=0.189  Sum_probs=224.4

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhcCC-CCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQLK-FPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD  171 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~~-~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd  171 (422)
                      +.++|+|+.+++++ +++.+++++.+.. ....| ++++..+||+++++++|.  +++++++|+++++.+++++++++||
T Consensus         2 ~~~~i~~~~~~~~~-p~~~~~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~--~~~~~~~~gt~a~~~~~~~~~~~gd   78 (347)
T 1jg8_A            2 PHMMIDLRSDTVTK-PTEEMRKAMAQAEVGDDVYGEDPTINELERLAAETFGK--EAALFVPSGTMGNQVSIMAHTQRGD   78 (347)
T ss_dssp             ---CEECSCGGGCC-CCHHHHHHHHTCCCCCGGGTCCHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHHCCTTC
T ss_pred             CceEEEeccccCCC-CCHHHHHHHhcCCCCCcccCCChHHHHHHHHHHHHhCC--ceEEEecCcHHHHHHHHHHhcCCCC
Confidence            35679999999998 6788999997642 22245 677889999999999996  3678888889999999999999999


Q ss_pred             EEEEcCCCchh-HH--HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeEEEEeCCCCcc-CcCCCHHHHHH
Q 014594          172 KIVDCPPTFTM-YE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPD-GSIINDEDLLK  242 (422)
Q Consensus       172 ~Vl~~~p~y~~-~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPt-G~~~~~e~l~~  242 (422)
                      +|+++.|+|.. +.  ..++..|++++.+ .++++.+|++++++++++     .++++|++++||||| |.+++.+++++
T Consensus        79 ~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~  157 (347)
T 1jg8_A           79 EVILEADSHIFWYEVGAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKE  157 (347)
T ss_dssp             EEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHH
T ss_pred             EEEEcCcchhhhccccchhhccCeEEEEe-cCCCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHH
Confidence            99999999964 32  2566789999998 545566899999999974     268999999999999 99999987776


Q ss_pred             HHcC----CCeEEEccCCcccc--C-CCchhhhhhcCCcEEEEccChhhhccccccce-eeecCHHHHHHHHHhcCC---
Q 014594          243 ILEM----PILVVLDEAYTEFS--G-LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEYLWRAKQP---  311 (422)
Q Consensus       243 i~~~----~~~li~Deay~~~~--~-~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G-~i~~~~~~~~~l~~~~~~---  311 (422)
                      |++.    |+++|+||+|..+.  . +..........+  .++.|+||.++++   +| |+++++++++.+...+..   
T Consensus       158 i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~l~~~---~G~~~~~~~~~~~~~~~~~~~~~~  232 (347)
T 1jg8_A          158 ICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYAD--SVMFCLSKGLCAP---VGSVVVGDRDFIERARKARKMLGG  232 (347)
T ss_dssp             HHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCS--EEEEESSSTTCCS---SCEEEEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHCCCEEEeehhhhhcchhhcCCChHHhccccc--EEEEecccccCCC---ceEEEEcCHHHHHHHHHHHHHcCC
Confidence            6553    99999999985321  1 112222222233  3344899988743   67 566799888877654332   


Q ss_pred             -CCCcHHHHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCC-CCCHHHHHHHHHhCCc
Q 014594          312 -YNVSVAAEVAACAALQNP-IYLEVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS-GMDAKKLKDDLAKMGV  387 (422)
Q Consensus       312 -~~~~~~~~~aa~~~L~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~-~~~~~~~~~~L~~~gI  387 (422)
                       ...+...+.++..+|+.. +.  +. +..++++++.+.|++++... ..+..++|+|++++. +.+..++.+.|.++||
T Consensus       233 ~~~~~~~~~~~~~~~l~~~~~~--~~-~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi  309 (347)
T 1jg8_A          233 GMRQAGVLAAAGIIALTKMVDR--LK-EDHENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLKVNAHGFIEALRNSGV  309 (347)
T ss_dssp             CCSSTHHHHHHHHHHHHHSSTT--HH-HHHHHHHHHHHHHHHHTCBCCGGGCCSSEEEEECTTSSSCHHHHHHHHHHHTE
T ss_pred             chhHHHHHHHHHHHHHHHHHHH--HH-HHHHHHHHHHHHHHhcCceeccCCCcceEEEEEcccccCCHHHHHHHHHHCCC
Confidence             234555556566666431 22  22 23356677888887764321 245678899999974 5678999999999999


Q ss_pred             EEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          388 MIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       388 ~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      .+++++    .+++||++.   +.++++++.++|++
T Consensus       310 ~v~~~~----~~~iRl~~~~~~~~e~i~~~~~~l~~  341 (347)
T 1jg8_A          310 LANAVS----DTEIRLVTHKDVSRNDIEEALNIFEK  341 (347)
T ss_dssp             ECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             EEecCC----CCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            999864    478999986   56666666666654

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=100.00  E-value=7.9e-33  Score=268.99  Aligned_cols=311  Identities=11%  Similarity=0.062  Sum_probs=231.2

Q ss_pred             CCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCCCCC-C-EEEeCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 014594          103 NENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESD-H-ILVGCGADELIDLIMRCVLDPGDKIVDCPP  178 (422)
Q Consensus       103 ~~~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~~~~-~-i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p  178 (422)
                      +..|.++++++++++.+....+.++..  ...++++++++++|++++ + +++++|++++++.++++++++||+|+++.|
T Consensus        24 ~pgp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~~  103 (376)
T 3f0h_A           24 TVGPVMSSEEVRAIGAEQVPYFRTTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVIDG  103 (376)
T ss_dssp             SSSSCCCCHHHHHHHTSCCCCCSSHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEEES
T ss_pred             cCCCCCCcHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEEeC
Confidence            446777889999999874332444432  256789999999998653 4 555999999999999999999999999998


Q ss_pred             CchhHH--HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccC
Q 014594          179 TFTMYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA  255 (422)
Q Consensus       179 ~y~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Dea  255 (422)
                      .|....  ..+...|++++.++.+.++.+|++++++.++ +++++|++++|+||||.+++.+++.++|+. |+++|+|++
T Consensus       104 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~  182 (376)
T 3f0h_A          104 GSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDN-QNFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCV  182 (376)
T ss_dssp             SHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTT-SCCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECT
T ss_pred             ChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhc-cCceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcC
Confidence            776543  3466789999999987788999999999876 789999999999999999999999999987 999999999


Q ss_pred             CccccCCCchhhhhhcCCcEEEEccChhhhc-cccccceeeecCHHHHHHHHHhc-------------------CCCCCc
Q 014594          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAK-------------------QPYNVS  315 (422)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~r~G~i~~~~~~~~~l~~~~-------------------~~~~~~  315 (422)
                      |..+.....    ....+.++++.|+||.++ .+|  +|++++++++++.+....                   .+++.+
T Consensus       183 ~~~~~~~~~----~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (376)
T 3f0h_A          183 SAFLADPFN----MNECGADVMITGSQKVLACPPG--ISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPA  256 (376)
T ss_dssp             TTTTTSCCC----HHHHTCSEEEEETTTTTCCCSS--CEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCC
T ss_pred             ccccCcccc----ccccCccEEEecCcccccCCCc--eEEEEECHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCc
Confidence            986543211    112234588999999987 555  788999999998886422                   134555


Q ss_pred             HHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhC-CcEEE
Q 014594          316 VAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKM-GVMIR  390 (422)
Q Consensus       316 ~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~-gI~v~  390 (422)
                      ...+.++.++++   +.+.++ .+++++++++++.+.|++++.....+...++++...+.+.+.+++.+.|.++ ||.++
T Consensus       257 ~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~  336 (376)
T 3f0h_A          257 VGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLPFELVSESPANGVTSVHPTTANAYDIFLKLKDEYGIWIC  336 (376)
T ss_dssp             HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSSEEECCSSBBTTEEEEEESSSCHHHHHHHHHHHSSEECE
T ss_pred             HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCccCccccCceEEEEeCCCCCHHHHHHHHHHhCCEEEe
Confidence            544344444443   332456 8888999999999999988632222223333332224467899999999976 99999


Q ss_pred             eCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          391 HYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       391 ~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      ++.....++++||++.   +.++++++.++|++
T Consensus       337 ~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~  369 (376)
T 3f0h_A          337 PNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKD  369 (376)
T ss_dssp             ECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHH
T ss_pred             cCccccCCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence            8864445789999985   45556666666554

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=100.00  E-value=7e-33  Score=271.13  Aligned_cols=311  Identities=15%  Similarity=0.200  Sum_probs=235.9

Q ss_pred             CCCCCCeEEcCCCCCCCC---CCHHHHHHHhc-CCC-C---CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           91 GRKPEDIVKIDANENPYG---PPPEVREALGQ-LKF-P---YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~~~~---~~~~v~~al~~-~~~-~---~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      +..+++++|+..+.++..   .+|++.+++.+ +.. .   ..|+.+...++++++++++|  ++++++++|++++++.+
T Consensus        32 d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~~gt~a~~~a  109 (392)
T 3ruy_A           32 DPEGNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLTN--KEMVLPMNTGAEAVETA  109 (392)
T ss_dssp             CTTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHHT--CSEEEEESSHHHHHHHH
T ss_pred             eCCCCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcC--CCEEEEeCcHHHHHHHH
Confidence            345678899998765544   57999988876 221 1   22445567899999999998  67999999999999999


Q ss_pred             HHHhcCC----------CCEEEEcCCCchhHHHHHHHcCC-------------EEEEecCCCCCCCCHHHHHHHhhcCCC
Q 014594          163 MRCVLDP----------GDKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSDFSLNVELIADAVEREKP  219 (422)
Q Consensus       163 ~~~l~~~----------gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~d~~~l~~~i~~~~~  219 (422)
                      ++.+..+          +|+|++..|+|+.+...+...+.             .+..++.     .|+++++++++ +++
T Consensus       110 l~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~  183 (392)
T 3ruy_A          110 IKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-----GDLEALKAAIT-PNT  183 (392)
T ss_dssp             HHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-----TCHHHHHHHCC-TTE
T ss_pred             HHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-----ccHHHHHHHhc-cCe
Confidence            9977644          68999999999766555444322             2444442     28999999997 789


Q ss_pred             eEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChhhhcccc-cc
Q 014594          220 KCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAG-LR  291 (422)
Q Consensus       220 ~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK~~~~~G-~r  291 (422)
                      ++|++++|+||||.+++    .+++.++|+. |+++|+||+|.+|...+...  ...+...+++   ||||.++ +| +|
T Consensus       184 ~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~---~~SK~l~-gG~~~  259 (392)
T 3ruy_A          184 AAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMY---ILGKALG-GGVFP  259 (392)
T ss_dssp             EEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG-TTTSC
T ss_pred             EEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEE---EEchhhh-CChhh
Confidence            99999999999999998    8888888887 99999999998876543322  2222223433   6789865 46 99


Q ss_pred             ceeeecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC--CcccCCCceEEE
Q 014594          292 VGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF--LNPYPSYSNFIL  366 (422)
Q Consensus       292 ~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~--~~~~p~~~~f~~  366 (422)
                      +||+++++++++.+.....  .++.+++.+.++.++|+..+. + .+++++++++++.+.|++++.  +...++.++|++
T Consensus       260 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~  338 (392)
T 3ruy_A          260 ISCAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEE-EKLTERSLQLGEKLVGQLKEIDNPMITEVRGKGLFIG  338 (392)
T ss_dssp             CEEEEECHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHTTCCCTTEEEEEEETTEEE
T ss_pred             hEEEEECHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhcCCCceEEEeeeeEEE
Confidence            9999999999887765443  478899999999999875433 4 888999999999999998742  333455678888


Q ss_pred             EEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          367 CEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       367 ~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      +.+++  +..++.+.|.++||.++++.    ++++||+++   +.++++++.++|++
T Consensus       339 ~~~~~--~~~~l~~~l~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~  389 (392)
T 3ruy_A          339 IELNE--PARPYCEQLKAAGLLCKETH----ENVIRIAPPLVISEEDLEWAFQKIKA  389 (392)
T ss_dssp             EEESS--CSHHHHHHHHTTTEECCCBT----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             EEEcc--hHHHHHHHHHHCCcEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence            88874  77899999999999999875    689999944   45555666655554

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=100.00  E-value=3.8e-32  Score=267.55  Aligned_cols=316  Identities=14%  Similarity=0.102  Sum_probs=239.5

Q ss_pred             CCCCeEEcCCCCC-CCCCCHHHHHHHhc-CC-CC---CCC----CC-cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           93 KPEDIVKIDANEN-PYGPPPEVREALGQ-LK-FP---YIY----PD-PESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~~-~~---~~y----~~-~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      ++++++||+.+.. .++++|++.+++.+ +. ++   ..|    +. ....+++++++++++.+  ..++++++++++..
T Consensus        57 ~g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sGt~a~~~  134 (409)
T 3kki_A           57 ASPDDIILQSNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGFD--ECLLSQSGWNANVG  134 (409)
T ss_dssp             CCTTSEECCCSCTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTCS--EEEEESCHHHHHHH
T ss_pred             CCCceEEeeccCccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCCC--eEEEecchHHHHHH
Confidence            4678999988742 35568999888865 22 11   111    11 23568999999999975  34555666799999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~  241 (422)
                      ++++++++||.|+++.|+|..+...++..|++++.++.     .|++++++.+++.++++|++++|+||||.+++.+++.
T Consensus       135 ~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~  209 (409)
T 3kki_A          135 LLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-----NNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELV  209 (409)
T ss_dssp             HHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-----TCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHH
T ss_pred             HHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-----CCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHH
Confidence            99999999999999999999999888999999998873     6899999999765689999999999999999999999


Q ss_pred             HHHcC-CCeEEEccCCccccCCC---chhhhhhc-CCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC----C
Q 014594          242 KILEM-PILVVLDEAYTEFSGLE---SRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----Y  312 (422)
Q Consensus       242 ~i~~~-~~~li~Deay~~~~~~~---~~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~----~  312 (422)
                      ++|+. |+++|+||+|.++..+.   ......+. .+.++++.||||.++++   .||+++++++++.+.....+    .
T Consensus       210 ~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~---gg~v~~~~~~~~~~~~~~~~~~~~~  286 (409)
T 3kki_A          210 NISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYR---AGAIWCNNEVNRCVPFISYPAIFSS  286 (409)
T ss_dssp             HHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSS---CEEEEESSSGGGTHHHHCHHHHHSB
T ss_pred             HHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCC---ceEEEECHHHHHHHHHhCcCccccC
Confidence            99998 99999999998844322   11122211 23458899999999865   49999999888877654332    2


Q ss_pred             CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEe
Q 014594          313 NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRH  391 (422)
Q Consensus       313 ~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~  391 (422)
                      +.++..+.++.++++..+..+ .+++++++++++.+.|+++++ .+. +.++++|+.++...+..++.+.|.++||.+.+
T Consensus       287 ~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~-~~~~~~~~~~~~~~~~~~~~~~L~~~Gv~v~~  364 (409)
T 3kki_A          287 TLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQLGL-TIR-SESQIIGLETGDERNTEKVRDYLESNGVFGSV  364 (409)
T ss_dssp             CCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTTC-CCC-CSSSEEEEEEESHHHHHHHHHHHHHTTEECEE
T ss_pred             CCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC-ccC-CCCCEEEEEeCCHHHHHHHHHHHHHCCceEee
Confidence            456777777777776533224 888899999999999999864 333 57889999987544567899999999999987


Q ss_pred             CCC---CCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          392 YNN---KELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       392 ~~~---~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      +..   ....+++||+++   +.++++++.++|++
T Consensus       365 ~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~  399 (409)
T 3kki_A          365 FCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSD  399 (409)
T ss_dssp             ECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             eCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHH
Confidence            554   234679999997   44555555555543

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=100.00  E-value=6.8e-33  Score=274.72  Aligned_cols=324  Identities=14%  Similarity=0.100  Sum_probs=214.0

Q ss_pred             CCCCCeEEcCCC--CCCCCC-CHHHHHHHhc-CC-CC----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           92 RKPEDIVKIDAN--ENPYGP-PPEVREALGQ-LK-FP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~~-~~----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      .++++++|+..+  .++++. +|++.+++.+ +. ..    ..|+++...+++++++++++.+.++|++|+|++++++.+
T Consensus        26 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a  105 (430)
T 3i4j_A           26 DAGRRYLDGSSGALVANIGHGRAEVGERMAAQAARLPFVHGSQFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESA  105 (430)
T ss_dssp             TTSCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHH
T ss_pred             CCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHH
Confidence            356778999887  667764 8899888765 22 11    234555567899999999998889999999999999999


Q ss_pred             HHHhc--------CCCCEEEEcCCCchhHHHHHHHcCC---------------EEEEecCCCCC---CCCHHHHHHHhhc
Q 014594          163 MRCVL--------DPGDKIVDCPPTFTMYEFDAAVNGA---------------AVVKVPRKSDF---SLNVELIADAVER  216 (422)
Q Consensus       163 ~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~g~---------------~~~~v~~~~~~---~~d~~~l~~~i~~  216 (422)
                      ++.++        .++|.|++..|+|+.+...+...+.               .+..++.++.+   ..|+++|++.+++
T Consensus       106 l~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~  185 (430)
T 3i4j_A          106 VKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLER  185 (430)
T ss_dssp             HHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHh
Confidence            99876        3478999999999987765544333               22223322211   1366889988863


Q ss_pred             ---CCCeEEEEeCCCC-ccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhh-hcCCcEEEEccChhh
Q 014594          217 ---EKPKCIFLTSPNN-PDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKR  284 (422)
Q Consensus       217 ---~~~~~i~l~~p~N-PtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~~~S~SK~  284 (422)
                         .++++|+++.++| ++|...+    .+++.++|+. |+++|+||+|.+|...+..  .... +...++   .+|||.
T Consensus       186 ~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di---~t~sK~  262 (430)
T 3i4j_A          186 EGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDI---AVLGKG  262 (430)
T ss_dssp             HCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSE---EEECGG
T ss_pred             cCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcE---EEEccc
Confidence               3456666666677 8998665    5666666766 9999999999988654322  1222 222333   368999


Q ss_pred             hcccc-ccceeeecCHHHHHHHHHh------cCCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594          285 AGLAG-LRVGYGAFPLSIIEYLWRA------KQPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVP  353 (422)
Q Consensus       285 ~~~~G-~r~G~i~~~~~~~~~l~~~------~~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~  353 (422)
                      ++ +| +|+||+++++++++.+...      ..+|+.+++++.++.++|+.   +++.+ .++..+..++.+.+.+++++
T Consensus       263 l~-~G~~r~G~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  341 (430)
T 3i4j_A          263 LA-AGYAPLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFP  341 (430)
T ss_dssp             GT-TTSSCCEEEEECHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             cc-CCccccEEEEECHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            98 59 9999999999999999863      34578899999999999873   34444 55555555555555555566


Q ss_pred             CCcccCCCceEEEEEeCCC---------CCHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEec---ChhhHHHHHHHH
Q 014594          354 FLNPYPSYSNFILCEVTSG---------MDAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVG---KPEHTDALMECL  418 (422)
Q Consensus       354 ~~~~~p~~~~f~~~~~~~~---------~~~~~~~~~L~~~gI~v~~~~~---~~~~~~iRis~~---~~~~~~~l~~al  418 (422)
                      .+...++.|+|+++++++.         ....++.+.|+++||.++++..   ...++++||+++   +.++++++.++|
T Consensus       342 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l  421 (430)
T 3i4j_A          342 QMMQVRGTGLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALL  421 (430)
T ss_dssp             TEEEEEEETTEEEEEEC------------CHHHHHHHHHHTTEECC-----------CEEEECCCTTCCHHHHHHHHHHH
T ss_pred             CeEEEEEEEEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHH
Confidence            5555567788999988521         1236789999999999998732   223679999976   344444444444


Q ss_pred             h
Q 014594          419 M  419 (422)
Q Consensus       419 ~  419 (422)
                      +
T Consensus       422 ~  422 (430)
T 3i4j_A          422 A  422 (430)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=100.00  E-value=3.7e-32  Score=269.33  Aligned_cols=320  Identities=13%  Similarity=0.137  Sum_probs=227.8

Q ss_pred             CCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CC-CC----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK-FP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~-~~----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      ..+..++|+..+.  ++++ .+|++.+++.+ +. ..    .+|+.+...++++++++++++++++|++|+|++++++.+
T Consensus        40 ~~g~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~a  119 (429)
T 1s0a_A           40 SDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVA  119 (429)
T ss_dssp             TTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCCCSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHH
T ss_pred             CCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHH
Confidence            3456789998886  5665 57999988875 22 11    245555567899999999998889999999999999999


Q ss_pred             HHHhc---C----CCCEEEEcCCCchhHHHHHHH-c---------------CCEEEEecCC---CCC-CCCHHHHHHHhh
Q 014594          163 MRCVL---D----PGDKIVDCPPTFTMYEFDAAV-N---------------GAAVVKVPRK---SDF-SLNVELIADAVE  215 (422)
Q Consensus       163 ~~~l~---~----~gd~Vl~~~p~y~~~~~~~~~-~---------------g~~~~~v~~~---~~~-~~d~~~l~~~i~  215 (422)
                      ++.+.   +    |||+|++..|+|+.+...+.. .               +...+.++..   ..+ .+|++++++.++
T Consensus       120 i~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~  199 (429)
T 1s0a_A          120 MKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMA  199 (429)
T ss_dssp             HHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHH
T ss_pred             HHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHH
Confidence            98653   2    689999999999865443322 1               2344444321   133 489999999986


Q ss_pred             c--CCCeEEEEeCC-CCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCc--hhhhhhcCCcEEEEccChhhh
Q 014594          216 R--EKPKCIFLTSP-NNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRA  285 (422)
Q Consensus       216 ~--~~~~~i~l~~p-~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~~~S~SK~~  285 (422)
                      +  +++++|+++.+ +||||.+.+    .+++.++++. |+++|+||+|.+|...+.  .........+++   ||||.+
T Consensus       200 ~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~---t~sK~l  276 (429)
T 1s0a_A          200 AHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDIL---CLGKAL  276 (429)
T ss_dssp             HHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGG
T ss_pred             hCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEE---Eecccc
Confidence            4  45666665544 699997665    5555566665 999999999998764332  122222233433   789999


Q ss_pred             cccc-ccceeeecCHHHHHHHHHh-------cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC---CC
Q 014594          286 GLAG-LRVGYGAFPLSIIEYLWRA-------KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV---PF  354 (422)
Q Consensus       286 ~~~G-~r~G~i~~~~~~~~~l~~~-------~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~---~~  354 (422)
                      + +| +|+||+++++++++.+...       ..+++.|++++.++.++|+..+-.+..++++++++++.+.|+++   +.
T Consensus       277 ~-~G~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~  355 (429)
T 1s0a_A          277 T-GGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARDAEM  355 (429)
T ss_dssp             G-TSSSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGGGCTT
T ss_pred             c-CCCccceEEEeCHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            8 68 9999999999999888763       23577899999998888863111125667778889999988875   33


Q ss_pred             CcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          355 LNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       355 ~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      +...++.++|+|+++++..+..++.+.|.++||.++++     ++++||+++   +.++++++.++|++
T Consensus       356 ~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~-----~~~iRis~~~~~t~e~i~~~~~~l~~  419 (429)
T 1s0a_A          356 VADVRVLGAIGVVETTHPVNMAALQKFFVEQGVWIRPF-----GKLIYLMPPYIILPQQLQRLTAAVNR  419 (429)
T ss_dssp             EEEEEEETTEEEEEESSCBCHHHHHHHHHHTTEECCCB-----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             EEEEEEeeEEEEEEECCcccHHHHHHHHHHCCCEEecc-----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence            33234567899999976567889999999999999885     379999954   55566666666654

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=100.00  E-value=3.6e-33  Score=276.10  Aligned_cols=321  Identities=12%  Similarity=0.099  Sum_probs=225.2

Q ss_pred             CCCCeEEcCCCCC--CCC-CCHHHHHHHhc-CCC-C----CCCCCcchHHHHHHHHHHc-CCCCCCEEEeCCHHHHHHHH
Q 014594           93 KPEDIVKIDANEN--PYG-PPPEVREALGQ-LKF-P----YIYPDPESRRLRAALAKDS-GLESDHILVGCGADELIDLI  162 (422)
Q Consensus        93 ~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~-~----~~y~~~~~~~lr~~la~~~-~~~~~~i~~~~G~~~al~~~  162 (422)
                      .+.+++|+..+.+  +++ ++|++.+++.+ +.. .    ..|+..+..+|+++|++++ +-.+++|++|+|++++++.+
T Consensus        39 ~g~~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~  118 (426)
T 1sff_A           39 EGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENA  118 (426)
T ss_dssp             TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHH
T ss_pred             CCCEEEEcccChhhcccCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCcccccEEEEeCchHHHHHHH
Confidence            4567899987764  554 67899998876 322 1    1246677899999999999 51248999999999999999


Q ss_pred             HH---HhcCCCCEEEEcCCCchhHH-HHHHHcCCE-------------EEEecCCC-----CCCCCHHHHHHHhhc----
Q 014594          163 MR---CVLDPGDKIVDCPPTFTMYE-FDAAVNGAA-------------VVKVPRKS-----DFSLNVELIADAVER----  216 (422)
Q Consensus       163 ~~---~l~~~gd~Vl~~~p~y~~~~-~~~~~~g~~-------------~~~v~~~~-----~~~~d~~~l~~~i~~----  216 (422)
                      ++   .++++| .|++.+|+|+.+. ......|.+             ++.++.+.     ++.+|++++++.+++    
T Consensus       119 ~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~  197 (426)
T 1sff_A          119 VKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAP  197 (426)
T ss_dssp             HHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCG
T ss_pred             HHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCC
Confidence            88   677776 8999999997654 345555543             66677543     223689999998864    


Q ss_pred             CCCeEEEEe-CCCCccC-cCCCHHHHHHHH---cC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccc
Q 014594          217 EKPKCIFLT-SPNNPDG-SIINDEDLLKIL---EM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGL  290 (422)
Q Consensus       217 ~~~~~i~l~-~p~NPtG-~~~~~e~l~~i~---~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~  290 (422)
                      .++++|+++ +++| || .+++.+++++|+   +. |+++|+||+|.+|...+.... .+..+..+.+.||||.++. |+
T Consensus       198 ~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~-~~~~~~~~di~s~sK~~~~-Gl  274 (426)
T 1sff_A          198 EDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFA-MEQMGVAPDLTTFAKSIAG-GF  274 (426)
T ss_dssp             GGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSG-GGGTTSCCSEEEECGGGGT-SS
T ss_pred             CceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhh-hhhcCCCCCEEEEcccccC-CC
Confidence            467788875 6678 99 566655555554   44 999999999998765432211 1122222334499999995 99


Q ss_pred             cceeeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCcccCCCceE
Q 014594          291 RVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPYPSYSNF  364 (422)
Q Consensus       291 r~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~f  364 (422)
                      |+||+++++++++.+...  ...++.+++.+.++.++|+..+..+..++++++++++.+.|++    ++.+...++.++|
T Consensus       275 riG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~  354 (426)
T 1sff_A          275 PLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAM  354 (426)
T ss_dssp             CCEEEEEEHHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEETTE
T ss_pred             ceEEEEEcHHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEE
Confidence            999999999988776532  2346789999999988775321101556667777777777765    3332223345899


Q ss_pred             EEEEeC--------CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          365 ILCEVT--------SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       365 ~~~~~~--------~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      +|++++        .+.+..++.+.|.++||.++++..  .++++||+++   +.++++++.++|+
T Consensus       355 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~--~~~~iRi~~~~~~~~~~i~~~~~~l~  418 (426)
T 1sff_A          355 IAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGP--YYNVLRILVPLTIEDAQIRQGLEIIS  418 (426)
T ss_dssp             EEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEEST--TSCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             EEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCC--CCCEEEEECCccCCHHHHHHHHHHHH
Confidence            999984        223567889999999999999864  3689999986   4555555555544

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=100.00  E-value=1.3e-32  Score=271.78  Aligned_cols=314  Identities=15%  Similarity=0.159  Sum_probs=222.5

Q ss_pred             CCCCCeEEcCCCC--CCCCC--CHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHH
Q 014594           92 RKPEDIVKIDANE--NPYGP--PPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (422)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~~--~~~v~~al~~-~~~~-----~~y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~  160 (422)
                      ..+..++|+..+.  ++++.  +|++.+++.+ +...     ..|+.+...+++++++++++++ +++|++|+|++++++
T Consensus        39 ~~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~  118 (419)
T 2eo5_A           39 VDGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAHAAANDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIE  118 (419)
T ss_dssp             TTSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSCCCSCSCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHH
T ss_pred             CCCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCccccccccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHH
Confidence            3456789998887  56755  6999998876 3221     2366655788999999999987 789999999999999


Q ss_pred             HHHHHhcC-CCCEEEEcCCCchhHHHHHH-HcC-------------CEEEEecCCCCCC----------------CCHHH
Q 014594          161 LIMRCVLD-PGDKIVDCPPTFTMYEFDAA-VNG-------------AAVVKVPRKSDFS----------------LNVEL  209 (422)
Q Consensus       161 ~~~~~l~~-~gd~Vl~~~p~y~~~~~~~~-~~g-------------~~~~~v~~~~~~~----------------~d~~~  209 (422)
                      .+++.+.. +||+|++..|+|+.+...+. ..|             ..++.++.++++.                +|+++
T Consensus       119 ~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~  198 (419)
T 2eo5_A          119 ASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEF  198 (419)
T ss_dssp             HHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHH
T ss_pred             HHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHH
Confidence            99987644 48999999999975443322 222             2567777544432                36889


Q ss_pred             HH-HHhhc----CCCeEEEEeCCCCccCcCC-C---HHHHHHHHcC-CCeEEEccCCccccCCCc--hhhhhhcCCcEEE
Q 014594          210 IA-DAVER----EKPKCIFLTSPNNPDGSII-N---DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIV  277 (422)
Q Consensus       210 l~-~~i~~----~~~~~i~l~~p~NPtG~~~-~---~e~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~  277 (422)
                      |+ +.+++    +++++|+++..|||||... +   .+++.++++. |+++|+||+|.+|...+.  ........++++ 
T Consensus       199 l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~-  277 (419)
T 2eo5_A          199 IEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVI-  277 (419)
T ss_dssp             HHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE-
T ss_pred             HHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEE-
Confidence            99 88864    3455555443356789755 4   5555555555 999999999998864332  122223334433 


Q ss_pred             EccChhhhcccc-ccceeeecCHHHHHHHH-HhcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCC
Q 014594          278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLW-RAKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFL  355 (422)
Q Consensus       278 ~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~-~~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  355 (422)
                        ||||.++ +| +|+||++++++++ .+. ....+++.|++++.++.++|+..+  +.+++++++++++.+.|+++  +
T Consensus       278 --t~sK~~~-~G~~riG~~~~~~~~~-~~~~~~~~t~~~n~~~~~aa~aal~~~~--~~~~~~~~~~~~l~~~L~~~--~  349 (419)
T 2eo5_A          278 --TLAKALG-GGIMPIGATIFRKDLD-FKPGMHSNTFGGNALACAIGSKVIDIVK--DLLPHVNEIGKIFAEELQGL--A  349 (419)
T ss_dssp             --EECGGGG-TTTSCCEEEEEEGGGC-CC------CCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHTTS--S
T ss_pred             --Eeccccc-CCccceEEEEEchHhh-cCCcccCCCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHh--h
Confidence              7999999 59 9999999998877 552 233457889999999999996421  27788899999999999887  3


Q ss_pred             cccCCCceEEEEEeC-CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          356 NPYPSYSNFILCEVT-SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       356 ~~~p~~~~f~~~~~~-~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      ...++.++|+++++. ...+.. +.+.|.++||.++++.    ++++||+++   +.++++++.++|+
T Consensus       350 ~~~~~~g~~~~i~~~~~~~~~~-~~~~l~~~Gv~v~~~~----~~~lRis~~~~~t~e~i~~~l~~l~  412 (419)
T 2eo5_A          350 DDVRGIGLAWGLEYNEKKVRDR-IIGESFKRGLLLLPAG----RSAIRVIPPLVISEEEAKQGLDILK  412 (419)
T ss_dssp             SEEEEETTEEEEECSCHHHHHH-HHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             hheEeeeEEEEEEEecCccHHH-HHHHHHHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHH
Confidence            334567889999984 212355 8888889999999875    589999865   4555555555544

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=100.00  E-value=4.8e-32  Score=266.28  Aligned_cols=316  Identities=16%  Similarity=0.171  Sum_probs=237.4

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCc----chH---HHH----HHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDP----ESR---RLR----AALAKDSGLESDHILVGCGADELID  160 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~~----~~~---~lr----~~la~~~~~~~~~i~~~~G~~~al~  160 (422)
                      .+++++..+++++  +|++.+++.+ +.  ...+||..    |..   .++    +++++++|.++++|++++|+ +++.
T Consensus        23 ~~~i~~~~~~~~~--~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~~~i~~~sGt-~a~~   99 (407)
T 2dkj_A           23 REGLELIASENFV--SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAWANVQPHSGS-QANM   99 (407)
T ss_dssp             HTSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHH-HHHH
T ss_pred             hcceeeccCCCCC--CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCcceEEecchH-HHHH
Confidence            3579999999998  7999999987 32  23456543    222   233    48889999876667777765 5999


Q ss_pred             HHHHHhcCCCCEEEEcCCCchhH---HHHHHHcCC--EEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594          161 LIMRCVLDPGDKIVDCPPTFTMY---EFDAAVNGA--AVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (422)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~---~~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~  234 (422)
                      .++++++++||+|+++.|+|+.+   ...++..|.  ..+.++.+ +++.+|++++++.+++.++++|++++|+||  ..
T Consensus       100 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~--~~  177 (407)
T 2dkj_A          100 AVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASAYP--RF  177 (407)
T ss_dssp             HHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEECCSSCC--SC
T ss_pred             HHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEEEeccccC--CC
Confidence            99999999999999999999876   233344455  55555533 467899999999997447999999999998  78


Q ss_pred             CCHHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcCC
Q 014594          235 INDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP  311 (422)
Q Consensus       235 ~~~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~  311 (422)
                      .+.+++.++|+. |+++|+||+|.. +.+.+.......  ..++++.|+||.  ++|.|+||++++ +++++.+......
T Consensus       178 ~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~--~~di~~~s~sK~--l~g~~~G~~~~~~~~~~~~l~~~~~~  253 (407)
T 2dkj_A          178 WDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLP--YAHVVTSTTHKT--LRGPRGGLILSNDPELGKRIDKLIFP  253 (407)
T ss_dssp             CCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTT--TCSEEEEESSGG--GCCCSCEEEEESCHHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHcCCEEEEEccccccccccCccCCccc--cccEEEEecccc--CCCCCceEEEECCHHHHHHHHhhhcc
Confidence            899999999987 999999999987 432221111111  246889999994  468899999999 8999988776554


Q ss_pred             C---CCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCccc--CCCceEEEEEeCC-CCCHHHHHHHH
Q 014594          312 Y---NVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPY--PSYSNFILCEVTS-GMDAKKLKDDL  382 (422)
Q Consensus       312 ~---~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~--p~~~~f~~~~~~~-~~~~~~~~~~L  382 (422)
                      +   +.+.....++.++|+.  .++++ .+++++++++++.+.|++++ +.+.  ++.++|+|++++. +.+..++.+.|
T Consensus       254 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  332 (407)
T 2dkj_A          254 GIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRG-YRIVTGGTDNHLFLVDLRPKGLTGKEAEERL  332 (407)
T ss_dssp             TTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSSSEEEEECGGGTCCHHHHHHHH
T ss_pred             cccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCC-ceeecCCCCceEEEEECcccCCCHHHHHHHH
Confidence            3   3444444455666654  35666 88999999999999999885 4433  5688999999974 45788999999


Q ss_pred             HhCCcEEEeCCC------CCCCCeEEEEe-------cChhhHHHHHHHHhh
Q 014594          383 AKMGVMIRHYNN------KELKGYVRVSV-------GKPEHTDALMECLMH  420 (422)
Q Consensus       383 ~~~gI~v~~~~~------~~~~~~iRis~-------~~~~~~~~l~~al~~  420 (422)
                      .++||.++++..      ...++++||++       .+.++++++.++|++
T Consensus       333 ~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~  383 (407)
T 2dkj_A          333 DAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDR  383 (407)
T ss_dssp             HHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHH
T ss_pred             HHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHH
Confidence            999999998763      12467999998       467777888777765

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=100.00  E-value=5.5e-32  Score=261.25  Aligned_cols=309  Identities=14%  Similarity=0.062  Sum_probs=234.2

Q ss_pred             eEEcCCCCCCCCCCHHHHHHHhc-C---C--CCCCCCCc--chHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHHHHHhc
Q 014594           97 IVKIDANENPYGPPPEVREALGQ-L---K--FPYIYPDP--ESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVL  167 (422)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~-~---~--~~~~y~~~--~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~~~~~~l~  167 (422)
                      .+.+..  .|.+.++++++++.+ +   .  ..+.|+..  ...++++.+++++|.+ +++|++|+|+++++.+++++++
T Consensus         5 ~~~~~p--~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~   82 (362)
T 3ffr_A            5 KIYFTP--GPSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCV   82 (362)
T ss_dssp             CEEECS--SSCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHC
T ss_pred             ceeccC--CCcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhcc
Confidence            344443  456667778755543 1   1  22333332  2567899999999874 5789999999999999999999


Q ss_pred             CCCCEEEEcCCCch-hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC
Q 014594          168 DPGDKIVDCPPTFT-MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM  246 (422)
Q Consensus       168 ~~gd~Vl~~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~  246 (422)
                      ++ +.+++..+.|. .+...++..|++++.++.++++.+|+++++  ++ +++|+|++++|+||||.+++.+++.++++.
T Consensus        83 ~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~--~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~  158 (362)
T 3ffr_A           83 EK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAAFGKGFYPADIT--VP-ADAEIICLTHNETSSGVSMPVEDINTFRDK  158 (362)
T ss_dssp             SS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCGGGCC--CC-TTCCEEEEESEETTTTEECCHHHHTTSGGG
T ss_pred             CC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecCCCCCCCHHHHh--cc-CCccEEEEEcCCCCcceeCCHHHHHHHHHh
Confidence            88 55666666666 334466778999999998778899999998  54 789999999999999999999999999874


Q ss_pred             --CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhc-cccccceeeecCHHHHHHHHHhcC-------------
Q 014594          247 --PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAKQ-------------  310 (422)
Q Consensus       247 --~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~r~G~i~~~~~~~~~l~~~~~-------------  310 (422)
                        |+++|+|++|..+.....    .  .+.++++.|+||.++ ++|  +|++++++++++.+.....             
T Consensus       159 ~p~~~li~D~a~~~~~~~~~----~--~~~d~~~~s~~K~~~~~~G--~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~  230 (362)
T 3ffr_A          159 NKDALIFVDAVSSLPYPKFD----W--TKIDSVFFSVQKCFGLPAG--LGVWILNDRVIEKSKALLAKRKSIGTYHTIPS  230 (362)
T ss_dssp             STTSEEEEECTTTTTSSCCC----T--TSCSEEEEETTSTTCCCSC--CEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHH
T ss_pred             CCCCEEEEecccccCCcccC----h--hHCcEEEEecccccCCCCc--eEEEEECHHHHHHhhhccccCCCCcccccHHH
Confidence              899999999986542211    1  114488899999998 677  6888999999888776442             


Q ss_pred             ----------CCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccC-----CCceEEEEEeCCC
Q 014594          311 ----------PYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYP-----SYSNFILCEVTSG  372 (422)
Q Consensus       311 ----------~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p-----~~~~f~~~~~~~~  372 (422)
                                .++.+...+.++..+++.  ...++ ++++++++++++.+.|++++++.+.+     ..+.++|+.+++ 
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-  309 (362)
T 3ffr_A          231 MLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTM-  309 (362)
T ss_dssp             HHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS-
T ss_pred             HHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCC-
Confidence                      566777777777777652  12245 88899999999999999986555443     235678888885 


Q ss_pred             CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          373 MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       373 ~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                       +..++.+.|.++||.++++..+..++++||+++   +.++++++.++|+++
T Consensus       310 -~~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~  360 (362)
T 3ffr_A          310 -LPGEINKILEPFDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEK  360 (362)
T ss_dssp             -CHHHHHHHHGGGTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             -CHHHHHHHHHHCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence             889999999988999998765556789999987   556777777777764

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=100.00  E-value=3.1e-31  Score=255.58  Aligned_cols=312  Identities=16%  Similarity=0.156  Sum_probs=230.2

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhcCCC--CCCCC-CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCC
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQLKF--PYIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDP  169 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~~~--~~~y~-~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~  169 (422)
                      ..+++|||+.+ ++.+++|++++++.+...  ...|+ .+...++++++++++| .+++|++++|+++++..++++++++
T Consensus         5 ~~~~~id~~~~-~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~g-~~~~v~~~~~gt~a~~~al~~~~~~   82 (356)
T 1v72_A            5 SRPPALGFSSD-NIAGASPEVAQALVKHSSGQAGPYGTDELTAQVKRKFCEIFE-RDVEVFLVPTGTAANALCLSAMTPP   82 (356)
T ss_dssp             -CCCCCBCSCG-GGCCCCHHHHHHHHHTTSSCCCSTTCSHHHHHHHHHHHHHHT-SCCEEEEESCHHHHHHHHHHTSCCT
T ss_pred             CCCceEeeccC-CccCCCHHHHHHHHhhccCcccccccchHHHHHHHHHHHHhC-CCCcEEEeCCccHHHHHHHHHhcCC
Confidence            34568999986 556788999999987422  34564 3456889999999999 5456999999999999999999999


Q ss_pred             CCEEEEcCCCchhHHHH--HHHc--CCEEEEecCCCCCCCCHHHHHH-HhhcC------CCeEEEEeCCCCccCcCCCHH
Q 014594          170 GDKIVDCPPTFTMYEFD--AAVN--GAAVVKVPRKSDFSLNVELIAD-AVERE------KPKCIFLTSPNNPDGSIINDE  238 (422)
Q Consensus       170 gd~Vl~~~p~y~~~~~~--~~~~--g~~~~~v~~~~~~~~d~~~l~~-~i~~~------~~~~i~l~~p~NPtG~~~~~e  238 (422)
                      ||+|+++.|+|..+...  +...  |++++.++.+ ++.+|++++++ ++++.      ++++|++++|+| ||.+++.+
T Consensus        83 gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~  160 (356)
T 1v72_A           83 WGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP-AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLD  160 (356)
T ss_dssp             TEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG-GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHH
T ss_pred             CCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC-CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHH
Confidence            99999999999765444  5555  9999999874 46899999999 88641      689999999987 99999988


Q ss_pred             HHHHHHcC----CCeEEEccCCccccC--CCchhhhh--hcCCcEEEEccChhhhccccccce--eeecCHHHHHHHHHh
Q 014594          239 DLLKILEM----PILVVLDEAYTEFSG--LESRMEWV--KKHDNLIVLRTFSKRAGLAGLRVG--YGAFPLSIIEYLWRA  308 (422)
Q Consensus       239 ~l~~i~~~----~~~li~Deay~~~~~--~~~~~~~~--~~~~~~i~~~S~SK~~~~~G~r~G--~i~~~~~~~~~l~~~  308 (422)
                      ++++|++.    |+++|+|++|..+..  .+......  ..... +++.|+||. +   .|+|  |+++++++++.+...
T Consensus       161 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d-~~~~s~sK~-g---~~~G~g~~~~~~~~~~~~~~~  235 (356)
T 1v72_A          161 EIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVD-ALSFGATKN-G---VLAAEAIVLFNTSLATEMSYR  235 (356)
T ss_dssp             HHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCC-EEEECCGGG-T---CSSCEEEEESSGGGHHHHHHH
T ss_pred             HHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCC-EEEEecccC-C---CcCccEEEEECHHHHhhHHHH
Confidence            88887664    999999999975421  11111111  11222 445689996 4   3556  888899988876544


Q ss_pred             cC---C-CCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCCCCCHHHHHHHHH
Q 014594          309 KQ---P-YNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLA  383 (422)
Q Consensus       309 ~~---~-~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~~~~~~~~~~L~  383 (422)
                      ..   . ...+...+.++...++++.|.+..++++++++++.+.|++++.+.+ .|..++|+|++++     .++.+.|.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~-----~~~~~~l~  310 (356)
T 1v72_A          236 RKRAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD-----SAMIDALL  310 (356)
T ss_dssp             HHHTTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC-----HHHHHHHH
T ss_pred             hhccCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC-----HHHHHHHH
Confidence            21   1 1223344445566676655555777888999999999998754543 5778899999985     37889999


Q ss_pred             hCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          384 KMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       384 ~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      ++||.++++. ++ ++++||+++   +.++++++.++|++
T Consensus       311 ~~gi~v~~g~-~~-~~~iRi~~~~~~~~~~i~~~~~~l~~  348 (356)
T 1v72_A          311 KAGFGFYHDR-WG-PNVVRFVTSFATTAEDVDHLLNQVRL  348 (356)
T ss_dssp             HTTCBCBCSS-SS-TTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             hcCeEEeccc-cC-CCeEEEEecCCCCHHHHHHHHHHHHH
Confidence            9999999876 33 789999986   45566666666654

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=100.00  E-value=3.2e-32  Score=266.68  Aligned_cols=311  Identities=17%  Similarity=0.163  Sum_probs=232.3

Q ss_pred             CCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CC---C-CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594           93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LK---F-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (422)
Q Consensus        93 ~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~---~-~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~  164 (422)
                      .+..++|++.+.  ++++ ++|.+.+++.+ +.   . ...|+.+...++++++++++++++++|++++|+++++..+++
T Consensus        43 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~  122 (395)
T 1vef_A           43 EGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQTLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALK  122 (395)
T ss_dssp             TSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTSCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHH
T ss_pred             CCCEEEEccCccccccCCCCCHHHHHHHHHHHHhCCCCccccCCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHH
Confidence            456788998876  6776 88999888876 21   1 123566667899999999998878899999999999999998


Q ss_pred             Hhc--CCCCEEEEcCCCchh-HHHHHHHcCCE------------EEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCC
Q 014594          165 CVL--DPGDKIVDCPPTFTM-YEFDAAVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN  229 (422)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~-~~~~~~~~g~~------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~N  229 (422)
                      ++.  .+||.|++.+|+|+. +.......|.+            +..++     ..|+++++++++ +++++|++++++|
T Consensus       123 ~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~-----~~d~~~l~~~i~-~~~~~v~~~~~~~  196 (395)
T 1vef_A          123 FARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIP-----YNDVEALKRAVD-EETAAVILEPVQG  196 (395)
T ss_dssp             HHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEEC-----TTCHHHHHHHCC-TTEEEEEECSEET
T ss_pred             HHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeC-----CCcHHHHHHHhc-cCEEEEEEeCccC
Confidence            764  578999999999964 44455556765            33333     258999999997 6889998877789


Q ss_pred             ccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceeeecCHHHH
Q 014594          230 PDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII  302 (422)
Q Consensus       230 PtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~  302 (422)
                      |||.+.+    .+++.++|+. |+++|+||+|.+|...+..  ....+...+++   ||||.++. |+|+||++++++++
T Consensus       197 ~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~---s~sK~~~~-g~~~G~~~~~~~~~  272 (395)
T 1vef_A          197 EGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL---TLAKALGG-GVPLGVAVMREEVA  272 (395)
T ss_dssp             TTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE---EECGGGGT-TSSCEEEEEEHHHH
T ss_pred             CCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEE---EEcccccC-CCceEEEEehHHHH
Confidence            9998876    6667777766 9999999999976543221  22222233433   78999985 99999999999887


Q ss_pred             HHHHH--hcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC--cccCCCceEEEEEeCCCCCHHH
Q 014594          303 EYLWR--AKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFL--NPYPSYSNFILCEVTSGMDAKK  377 (422)
Q Consensus       303 ~~l~~--~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~--~~~p~~~~f~~~~~~~~~~~~~  377 (422)
                      +.+..  ....++.+++.+.++.++|+..+. + ..++++++++++.+.|++++..  ...++.++|+|++++.  +..+
T Consensus       273 ~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~~~~~~~~~--~~~~  349 (395)
T 1vef_A          273 RSMPKGGHGTTFGGNPLAMAAGVAAIRYLER-TRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVGLELKE--KAAP  349 (395)
T ss_dssp             HTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEEEEESS--CSHH
T ss_pred             hhhccCCcCCCcCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHhhcCceEEEEEEEEEEEEEEcC--hHHH
Confidence            77654  233467889999888888865332 3 7788889999999999887641  1234567899999974  3678


Q ss_pred             HHHHHH-hCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          378 LKDDLA-KMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       378 ~~~~L~-~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      +.+.|. ++||.++++.    ++++||+++   +.++++++.++|++
T Consensus       350 l~~~l~~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~  392 (395)
T 1vef_A          350 YIARLEKEHRVLALQAG----PTVIRFLPPLVIEKEDLERVVEAVRA  392 (395)
T ss_dssp             HHHHHHHHHCEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence            999999 9999999863    689999875   34555555555543

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=100.00  E-value=3.6e-31  Score=257.85  Aligned_cols=311  Identities=14%  Similarity=0.080  Sum_probs=235.3

Q ss_pred             EEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCC----CCCCEEEeCCHHHHHHHHHHHhc---C
Q 014594           98 VKIDANENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGL----ESDHILVGCGADELIDLIMRCVL---D  168 (422)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~----~~~~i~~~~G~~~al~~~~~~l~---~  168 (422)
                      +.|..  +|.+.++++.+++.+....+++|..  ...+++++++++++.    ++++|++|+|+++++..+++++.   +
T Consensus         7 ~~~~p--~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~   84 (385)
T 2bkw_A            7 TLLIP--GPIILSGAVQKALDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKA   84 (385)
T ss_dssp             EECSS--SSCCCCHHHHHTTSCCCCCTTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTC
T ss_pred             eeecC--CCcCchHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCC
Confidence            45544  4667789999999874332334433  356789999999864    46899999999999999999987   8


Q ss_pred             CCCEEEEc-CCCchhH-HHHHHHcCCEEEEecC-CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHc
Q 014594          169 PGDKIVDC-PPTFTMY-EFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE  245 (422)
Q Consensus       169 ~gd~Vl~~-~p~y~~~-~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~  245 (422)
                      +||+|+++ .|.|+.+ ...++..|++++.++. ++++.+|++++++++++.++++|++++|+||||.+++.+++.++++
T Consensus        85 ~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~  164 (385)
T 2bkw_A           85 PNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIK  164 (385)
T ss_dssp             SCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHH
T ss_pred             CCCeEEEEcCCcchHHHHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHHHHHHHHH
Confidence            99999877 5567655 3567778999999998 7777899999999997448999999999999999999999999998


Q ss_pred             C---CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhh-ccccccceeeecCHHHHH-HHH--------------
Q 014594          246 M---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIE-YLW--------------  306 (422)
Q Consensus       246 ~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~r~G~i~~~~~~~~-~l~--------------  306 (422)
                      .   |+++|+||+|..... .  . .+...+.++++.|+||.+ |.+|  +||+++++++++ .+.              
T Consensus       165 ~~~~~~~li~D~a~~~~~~-~--~-~~~~~~~d~~~~s~~K~~~~~~G--~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~  238 (385)
T 2bkw_A          165 QTSPETFFVVDAVCSIGCE-E--F-EFDEWGVDFALTASQKAIGAPAG--LSISLCSSRFMDYALNDSKNGHVHGYFSSL  238 (385)
T ss_dssp             HHCTTSEEEEECTTTTTTS-C--C-CTTTTTCSEEEEESSSTTCCCSC--EEEEEECHHHHHHHTCHHHHCCCSCSTTCH
T ss_pred             hhCCCCEEEEECccccCCc-c--c-cccccCceEEEecCccccccCCc--ceEEEEcHHHHHHHHhhccCCCCCceeecH
Confidence            5   899999999974321 1  1 122334568899999965 4566  599999998876 431              


Q ss_pred             --------HhcC-----CCCCcHHHHHHHHHHccCC-hH-HH-HHHHHHHHHHHHHHHH-ccCCCCccc-C-----CCce
Q 014594          307 --------RAKQ-----PYNVSVAAEVAACAALQNP-IY-LE-VKEALIKERERLFKLL-KDVPFLNPY-P-----SYSN  363 (422)
Q Consensus       307 --------~~~~-----~~~~~~~~~~aa~~~L~~~-~~-~~-~~~~~~~~~~~l~~~L-~~~~~~~~~-p-----~~~~  363 (422)
                              ....     .++.+...+.++.++|+.. ++ ++ .+++++++++++.+.| ++++ +.+. +     ..++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~~~~  317 (385)
T 2bkw_A          239 RRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQ-LTSVSRYPSNMSAHG  317 (385)
T ss_dssp             HHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTC-CEESSCSSSTTBCSS
T ss_pred             HHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhcC-ceecccCcccccCCc
Confidence                    1111     2467777777777777542 22 45 7888999999999999 8874 4443 2     2478


Q ss_pred             EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEE-ec------ChhhHHHHHHHHhh
Q 014594          364 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVS-VG------KPEHTDALMECLMH  420 (422)
Q Consensus       364 f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~-~~~~~iRis-~~------~~~~~~~l~~al~~  420 (422)
                      ++|+++++   .+++.+.|.++||.++++..+ ..++++||+ ++      +.++++++.++|++
T Consensus       318 ~~~~~~~~---~~~~~~~l~~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~  379 (385)
T 2bkw_A          318 LTAVYVAD---PPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKL  379 (385)
T ss_dssp             CEEEECSC---HHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHH
T ss_pred             eEEEecCC---HHHHHHHHHHCCeEEeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHH
Confidence            89999873   788999999999999987652 346799999 65      55667777776654

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=100.00  E-value=4.1e-32  Score=269.09  Aligned_cols=315  Identities=19%  Similarity=0.121  Sum_probs=218.1

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcc----------hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPE----------SRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~----------~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      .+.++|+.+.+. ++++.+++++.+ +.....||...          ..++|+++++++|+++++|++|+|+++++..++
T Consensus        17 ~~~~~Ld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~   95 (432)
T 3a9z_A           17 NRKVYMDYNATT-PLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVI   95 (432)
T ss_dssp             -CCEECBTTTCC-CCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHH
T ss_pred             CCcEEeeCCccC-CCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHH
Confidence            456899998887 678999998876 32223444322          358999999999998889999999999999999


Q ss_pred             HHhc--------CCCCEEEEcCCCchhH-----------------HHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcC
Q 014594          164 RCVL--------DPGDKIVDCPPTFTMY-----------------EFDAAVNGAAVVKVPRKS-DFSLNVELIADAVERE  217 (422)
Q Consensus       164 ~~l~--------~~gd~Vl~~~p~y~~~-----------------~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~  217 (422)
                      ++++        ++||+|+++.|+|..+                 ...++..|++++.++.+. ++.+|+++|+++++ +
T Consensus        96 ~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~-~  174 (432)
T 3a9z_A           96 HSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVR-P  174 (432)
T ss_dssp             HHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCC-T
T ss_pred             HHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhcc-C
Confidence            9886        5899999999999764                 344455799999999764 66799999999997 6


Q ss_pred             CCeEEEEeCCCCccCcCCCHHHHHHHHcC-C----------CeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhc
Q 014594          218 KPKCIFLTSPNNPDGSIINDEDLLKILEM-P----------ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG  286 (422)
Q Consensus       218 ~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~----------~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~  286 (422)
                      ++++|++++|+||||.+++.+++.++++. +          +++|+||+|..+..... ...  ... .+++.|+||.+|
T Consensus       175 ~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~-~~~--~~~-d~~~~s~~K~~g  250 (432)
T 3a9z_A          175 TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVD-VED--LGV-DFLTIVGHKFYG  250 (432)
T ss_dssp             TEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCC-HHH--HCC-SEEEEEGGGTTC
T ss_pred             CceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccC-hhh--cCC-CEEEEehhHhcC
Confidence            89999999999999999999999999987 7          99999999986532111 111  122 356899999764


Q ss_pred             cccccceeeecCHHH-HHHHH---------HhcCCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCC
Q 014594          287 LAGLRVGYGAFPLSI-IEYLW---------RAKQPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPF  354 (422)
Q Consensus       287 ~~G~r~G~i~~~~~~-~~~l~---------~~~~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~  354 (422)
                         .|+||++++++. ...+.         .....++.+...+.++.++++. .++++ .+++++++++++.+.|+++..
T Consensus       251 ---~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g  327 (432)
T 3a9z_A          251 ---PRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEAEFG  327 (432)
T ss_dssp             ---CSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ---CcceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccC
Confidence               569999998765 22222         1223456788888777777764 34566 888999999999999987522


Q ss_pred             Ccc---cC-----CCceEEEEEeCC-CCCHHHHHHHHHhCCcEEEeCCC---------------CCC-----CCeEEEEe
Q 014594          355 LNP---YP-----SYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRHYNN---------------KEL-----KGYVRVSV  405 (422)
Q Consensus       355 ~~~---~p-----~~~~f~~~~~~~-~~~~~~~~~~L~~~gI~v~~~~~---------------~~~-----~~~iRis~  405 (422)
                      ..+   .+     ..+..+++.+++ +.+..++.+.+  .||.++.+..               .+.     .+++||++
T Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~  405 (432)
T 3a9z_A          328 KRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQC--QTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSV  405 (432)
T ss_dssp             GGEEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHC--SSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEEC
T ss_pred             CcEEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHh--cCeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEc
Confidence            221   12     123456677764 34566666655  3666665432               121     37999999


Q ss_pred             c---ChhhHHHHHHHHhh
Q 014594          406 G---KPEHTDALMECLMH  420 (422)
Q Consensus       406 ~---~~~~~~~l~~al~~  420 (422)
                      +   +.++++++.++|+.
T Consensus       406 ~~~~t~eei~~~~~~l~~  423 (432)
T 3a9z_A          406 GRSTTRAEVDLIVQDLKQ  423 (432)
T ss_dssp             CTTCCHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHH
Confidence            8   56677777766654

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=100.00  E-value=6.6e-33  Score=271.79  Aligned_cols=315  Identities=16%  Similarity=0.057  Sum_probs=223.9

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhcC-C----CCC-CCC-----CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQL-K----FPY-IYP-----DPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~----~~~-~y~-----~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      +.+.+.|+.+.+. ++++++.+++.+. .    ... .|.     .....++++++++++++++++|++|+|+++++..+
T Consensus        18 ~~~~iyld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~   96 (400)
T 3vax_A           18 GSHMTYLDAAATT-RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNIA   96 (400)
T ss_dssp             ----CCCCCCCCS-SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHH
T ss_pred             cCCcEEecCCCCC-CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHH
Confidence            4567888887765 6678888888762 1    100 111     12256899999999999889999999999999999


Q ss_pred             HHHhc----CCCC-EEEEcCCCchhHHHHHHH---cCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594          163 MRCVL----DPGD-KIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (422)
Q Consensus       163 ~~~l~----~~gd-~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~  234 (422)
                      +++++    ++|| +|+++.++|+.+......   .|++++.++.++++.+|+++++++++ +++++|++++|+||||.+
T Consensus        97 ~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~  175 (400)
T 3vax_A           97 LLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLR-PDTLLVSLMHVNNETGVI  175 (400)
T ss_dssp             HHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCC-TTEEEEECCSBCTTTCBB
T ss_pred             HHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcC-CCceEEEEECCCCCceee
Confidence            99887    8999 999999999876555443   69999999988888899999999997 689999999999999999


Q ss_pred             CCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeee-cCH-HHH---HHHHH-
Q 014594          235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA-FPL-SII---EYLWR-  307 (422)
Q Consensus       235 ~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~-~~~-~~~---~~l~~-  307 (422)
                      ++.++|.++++. |+++|+||+|......   . ..... .++++.|+||.+|.+|  +|+++ +++ ++.   ..+.. 
T Consensus       176 ~~l~~i~~la~~~~~~li~D~a~~~~~~~---~-~~~~~-~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~  248 (400)
T 3vax_A          176 QPVAELAQQLRATPTYLHVDAAQGYGKVP---G-DLTTP-IDMISISGHKIGAPKG--VGALVTRRREEMDDERVPLEPI  248 (400)
T ss_dssp             CCHHHHHHHHTTSSCEEEEECTTTTTTSG---G-GGGSC-CSEEEEETGGGTSCSS--CEEEEECBCSSSTTCBCCCCCS
T ss_pred             CcHHHHHHHHHhcCCEEEEEhhhhcCCCC---c-Chhhc-CcEEEEeHHHhCCCCc--eEEEEEecchhccccccccCce
Confidence            999999999998 9999999999843221   1 12222 4588999999777555  67777 655 111   11111 


Q ss_pred             --------hcCCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC----ceEEEEEeCCCC
Q 014594          308 --------AKQPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGM  373 (422)
Q Consensus       308 --------~~~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~f~~~~~~~~~  373 (422)
                              ....++.+...+.++.++++. .++++ .+++++++++++.+.|+ .+.+.+.++.    ++++++.++ +.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~-~~  326 (400)
T 3vax_A          249 MFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLA-STSFQVNGDQDHVVPHILNLSFE-DV  326 (400)
T ss_dssp             SCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHT-TTTCEECSCTTSBCTTEEEEECT-TC
T ss_pred             ecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhC-CCCEEEeCCcccCCCCEEEEEeC-CC
Confidence                    112345677777766666653 23556 88899999999999999 6555543332    367888887 57


Q ss_pred             CHHHHHHHHHhCCcEEEeCCCC--------------CC-----CCeEEEEe-c---ChhhHHHHHHHHhh
Q 014594          374 DAKKLKDDLAKMGVMIRHYNNK--------------EL-----KGYVRVSV-G---KPEHTDALMECLMH  420 (422)
Q Consensus       374 ~~~~~~~~L~~~gI~v~~~~~~--------------~~-----~~~iRis~-~---~~~~~~~l~~al~~  420 (422)
                      +.+++.+.|. +||.++++..+              +.     ++++||++ +   +.++++++.++|++
T Consensus       327 ~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~  395 (400)
T 3vax_A          327 DAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAK  395 (400)
T ss_dssp             CHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC----------------
T ss_pred             CHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHH
Confidence            8899999999 99999876421              11     48999999 6   34555666665554

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=100.00  E-value=2.7e-32  Score=267.47  Aligned_cols=310  Identities=14%  Similarity=0.131  Sum_probs=230.2

Q ss_pred             CCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CC---C-CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594           93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LK---F-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (422)
Q Consensus        93 ~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~---~-~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~  164 (422)
                      .+..++|++.+.  ++++ ++|++.+++.+ +.   . ...|+.+...++++++++++|  .+++++++|+++++..+++
T Consensus        38 ~g~~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~gg~~a~~~al~  115 (397)
T 2ord_A           38 KGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIHCSNLFWNRPQMELAELLSKNTF--GGKVFFANTGTEANEAAIK  115 (397)
T ss_dssp             TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCTTSEEHHHHHHHHHHHHTTT--SCEEEEESSHHHHHHHHHH
T ss_pred             CCCEEEECCccccccccCCCCHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHHHHHH
Confidence            456788998762  5554 57888888875 21   1 123544557889999999998  5799999999999999999


Q ss_pred             HhcC------C-CCEEEEcCCCchh-HHHHHHHcCCE------------EEEecCCCCCCCCHHHHHHHhhcCCCeEEEE
Q 014594          165 CVLD------P-GDKIVDCPPTFTM-YEFDAAVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPKCIFL  224 (422)
Q Consensus       165 ~l~~------~-gd~Vl~~~p~y~~-~~~~~~~~g~~------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l  224 (422)
                      .+..      + ++.|++.+|+|+. +...+...|.+            ++.++.     .|++++++.++ +++++|++
T Consensus       116 ~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~l~-~~~~~v~~  189 (397)
T 2ord_A          116 IARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-----NNVEDLRRKMS-EDVCAVFL  189 (397)
T ss_dssp             HHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-----TCHHHHHHHCC-TTEEEEEE
T ss_pred             HHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-----CCHHHHHHHhh-cCeEEEEE
Confidence            8753      5 4789999999964 34456667776            677764     38999999997 68999999


Q ss_pred             eCCCCccCc-CCCHHHHHHHHcC----CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceeeec
Q 014594          225 TSPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (422)
Q Consensus       225 ~~p~NPtG~-~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~  297 (422)
                      ++|+||||. +++.+++++|++.    |+++|+||+|.+|...+..  ....+...+++   ||||.++ +|+|+||+++
T Consensus       190 ~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~---s~sK~~~-~G~r~G~~~~  265 (397)
T 2ord_A          190 EPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVL---TTAKGLG-GGVPIGAVIV  265 (397)
T ss_dssp             CSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE---EECGGGG-TTSCCEEEEE
T ss_pred             ecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCCee---eeccccC-CCcCeEEEEE
Confidence            999999999 8988888877664    9999999999987643322  22233223333   7899998 8999999999


Q ss_pred             CHHHHHHHHH--hcCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccC----CCCcccCCCceEEEEEeC
Q 014594          298 PLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDV----PFLNPYPSYSNFILCEVT  370 (422)
Q Consensus       298 ~~~~~~~l~~--~~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~f~~~~~~  370 (422)
                      +++++ .+..  ....++.+++.+.++.++|+..+. + .+++++++++++.+.|+++    +.....++.++|++++++
T Consensus       266 ~~~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~  343 (397)
T 2ord_A          266 NERAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTK-EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFR  343 (397)
T ss_dssp             CSTTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEC
T ss_pred             chHhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEEEC
Confidence            98876 5542  223477899999988888864222 3 7778888888888888764    221123456789999997


Q ss_pred             CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          371 SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       371 ~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      +..+..++.+.|.++||.++++.    ++++||+++   +.++++++.++|++
T Consensus       344 ~~~~~~~l~~~l~~~gi~v~~~~----~~~iRis~~~~~~~e~i~~~~~~l~~  392 (397)
T 2ord_A          344 EEVSNREVATKCFENKLLVVPAG----NNTIRFLPPLTVEYGEIDLAVETLKK  392 (397)
T ss_dssp             TTSCHHHHHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHCCCEEccCC----CCEEEEECCcCCCHHHHHHHHHHHHH
Confidence            65678999999999999999874    589999954   44555555555543

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=99.98  E-value=1.7e-31  Score=262.29  Aligned_cols=311  Identities=16%  Similarity=0.215  Sum_probs=230.4

Q ss_pred             CCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~----~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      ..+++++|+..+  .++++ .+|++.+++.+ +..    ...|+.+...+++++++++++.  ++|++|+|++++++.++
T Consensus        36 ~~g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~v~~~~gg~~a~~~al  113 (406)
T 4adb_A           36 QQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFA--DRVFFCNSGAEANEAAL  113 (406)
T ss_dssp             TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTTSCCHHHHHHHHHHHHHSSC--SEEEEESSHHHHHHHHH
T ss_pred             CCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhcccccCCcCCHHHHHHHHHHHhhCCC--CeEEEeCcHHHHHHHHH
Confidence            456778999887  24444 47888888875 221    1345666678999999999985  49999999999999999


Q ss_pred             HHhcC-------CC-CEEEEcCCCchhHHHHHHHcCC-------------EEEEecCCCCCCCCHHHHHHHhhcCCCeEE
Q 014594          164 RCVLD-------PG-DKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSDFSLNVELIADAVEREKPKCI  222 (422)
Q Consensus       164 ~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i  222 (422)
                      +.++.       +| |+|++.+|+|+.+...+...+.             .+..++.     .|+++|+++++ +++++|
T Consensus       114 ~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~~~v  187 (406)
T 4adb_A          114 KLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-----NDINSASALID-DSTCAV  187 (406)
T ss_dssp             HHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-----TCHHHHHTTCS-TTEEEE
T ss_pred             HHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-----CcHHHHHHHhc-CCeEEE
Confidence            98765       66 9999999999877555544443             3444442     47999999997 789999


Q ss_pred             EEeCCCCccCcCC--CHHHHHHHHcC----CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhcccccccee
Q 014594          223 FLTSPNNPDGSII--NDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGY  294 (422)
Q Consensus       223 ~l~~p~NPtG~~~--~~e~l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~  294 (422)
                      +++ |+||||.++  +.+++++|++.    |+++|+||+|.+|...+..  ....+...+++   ||||.++ +|+|+||
T Consensus       188 ~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~---t~sK~~~-~G~r~G~  262 (406)
T 4adb_A          188 IVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLL---TTAKALG-GGFPVGA  262 (406)
T ss_dssp             EEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE---EECGGGG-TTSCCEE
T ss_pred             EEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEE---Eechhhc-CCCCeEE
Confidence            988 999999988  77777766553    9999999999987654332  22333334444   6799999 9999999


Q ss_pred             eecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCC----CCcccCCCceEEEEE
Q 014594          295 GAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVP----FLNPYPSYSNFILCE  368 (422)
Q Consensus       295 i~~~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~~~f~~~~  368 (422)
                      +++++++++.+....  ..++.+++.+.++.++|+..+..+.+++++++++++.+.|++++    .....+..++++++.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~  342 (406)
T 4adb_A          263 LLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCV  342 (406)
T ss_dssp             EEECHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEE
T ss_pred             EEEcHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEE
Confidence            999999998876543  34788999999999888643222277788888888888887642    122233467899999


Q ss_pred             eCCCC--CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          369 VTSGM--DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       369 ~~~~~--~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      +++..  +..++.+.|.++||.+++++    ++++||+++   +.++++++.++|+
T Consensus       343 ~~~~~~~~~~~~~~~l~~~gi~v~~~~----~~~iRi~~~~~~~~e~i~~~~~~l~  394 (406)
T 4adb_A          343 LNADYAGQAKQISQEAAKAGVMVLIAG----GNVVRFAPALNVSEEEVTTGLDRFA  394 (406)
T ss_dssp             ECTTTTTCHHHHHHHHHHTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             EeCCcHHHHHHHHHHHHHCCcEEeecC----CCeEEEECCCCCCHHHHHHHHHHHH
Confidence            97543  68899999999999999875    689999654   3444444444443

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=99.98  E-value=2.4e-31  Score=260.56  Aligned_cols=315  Identities=16%  Similarity=0.148  Sum_probs=227.2

Q ss_pred             CCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-CCC-CC---CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF-PY---IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~-~~---~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      .++++++|+..|  .++++ .+|++.+++.+ +.. .+   .|+++...+++++++++++  +++|++++|+++++..++
T Consensus        33 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~--~~~v~~~~gg~ea~~~al  110 (395)
T 3nx3_A           33 DKAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLHTSNLYYNENIAAAAKNLAKASA--LERVFFTNSGTESIEGAM  110 (395)
T ss_dssp             TTCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSCCCTTSBCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHH
T ss_pred             CCCCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHHHHH
Confidence            456789999988  67776 57899988876 322 12   2455557889999999998  579999999999999999


Q ss_pred             HHhc-------CCCCEEEEcCCCchhHHHHHHHcC-------------CEEEEecCCCCCCCCHHHHHHHhhcCCCeEEE
Q 014594          164 RCVL-------DPGDKIVDCPPTFTMYEFDAAVNG-------------AAVVKVPRKSDFSLNVELIADAVEREKPKCIF  223 (422)
Q Consensus       164 ~~l~-------~~gd~Vl~~~p~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~  223 (422)
                      +.+.       .++|+|++..|+|+.+...+...+             ..+..++.     .|+++++++++ +++++|+
T Consensus       111 ~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~~~v~  184 (395)
T 3nx3_A          111 KTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-----NDISSVEKLVN-EKTCAII  184 (395)
T ss_dssp             HHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-----TCHHHHHTTCC-TTEEEEE
T ss_pred             HHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-----CCHHHHHHhcc-CCeEEEE
Confidence            8765       457999999999976654443322             34555542     27999999997 6889999


Q ss_pred             EeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecC
Q 014594          224 LTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (422)
Q Consensus       224 l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~  298 (422)
                      +++++|++|.+.+    .+++.++|+. |+++|+||+|.+|...+.... ....+....+.||||.++ +|+|+||++++
T Consensus       185 ~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~-~~~~~~~~d~~t~sK~~~-~G~~~G~~~~~  262 (395)
T 3nx3_A          185 LESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFA-YEHAQILPDIMTSAKALG-CGLSVGAFVIN  262 (395)
T ss_dssp             EESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSG-GGGGTCCCSEEEECGGGT-TTSCCEEEEEC
T ss_pred             EeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchh-HHhcCCCCCEEEeccccc-CCCceEEEEEc
Confidence            9988888888855    5555556665 999999999998864332111 111122222447899998 59999999999


Q ss_pred             HHH-HHHHHHhc--CCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC
Q 014594          299 LSI-IEYLWRAK--QPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS  371 (422)
Q Consensus       299 ~~~-~~~l~~~~--~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~  371 (422)
                      +++ ++.+....  .+++.+++++.++.++|+.   +++.+ .++.....++.+.+.+.+++.+...++.++|+++.+++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~  342 (395)
T 3nx3_A          263 QKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGLGFMQGLSLDK  342 (395)
T ss_dssp             HHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECT
T ss_pred             hhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeEEEEEEEEeCC
Confidence            998 77775543  3578899999999988863   34444 44444455555555555566444456678999999986


Q ss_pred             CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          372 GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       372 ~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      ..+..++.+.|.++||.+++++    ++++||+++   +.++++++.++|++
T Consensus       343 ~~~~~~~~~~l~~~Gi~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~  390 (395)
T 3nx3_A          343 SVKVAKVIQKCQENALLLISCG----ENDLRFLPPLILQKEHIDEMSEKLRK  390 (395)
T ss_dssp             TSCHHHHHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence            5578999999999999999875    689999854   44555555555543

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=99.98  E-value=1.1e-31  Score=266.29  Aligned_cols=324  Identities=16%  Similarity=0.113  Sum_probs=221.6

Q ss_pred             CCCCCeEEcCCCCC--CCC-CCHHHHHHHhc-CC----CCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           92 RKPEDIVKIDANEN--PYG-PPPEVREALGQ-LK----FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        92 ~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~----~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      ..+..++|+..+.+  +++ .+|++.+++.+ +.    ....|+.....++++++++++++++++|++|+|++++++.++
T Consensus        40 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~  119 (433)
T 1zod_A           40 ADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLFSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAI  119 (433)
T ss_dssp             TTCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHH
T ss_pred             CCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHH
Confidence            34567889877653  454 47889888865 21    123456555688999999999988899999999999999999


Q ss_pred             HHhc--CCCCEEEEcCCCchhHHHHHHHc--------------CCEEEEecCC--CCCC--------CCHHHHHHHhhc-
Q 014594          164 RCVL--DPGDKIVDCPPTFTMYEFDAAVN--------------GAAVVKVPRK--SDFS--------LNVELIADAVER-  216 (422)
Q Consensus       164 ~~l~--~~gd~Vl~~~p~y~~~~~~~~~~--------------g~~~~~v~~~--~~~~--------~d~~~l~~~i~~-  216 (422)
                      +.+.  ..+|+|++.+|+|+.+...+...              |+..+.++..  ..++        +|+++|++.+++ 
T Consensus       120 ~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~  199 (433)
T 1zod_A          120 RMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQ  199 (433)
T ss_dssp             HHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhc
Confidence            8653  23589999999997654433321              3334433321  1122        369999999864 


Q ss_pred             --CCCeEEEEeCCCCccCcCC-C---HHHHHHHHcC-CCeEEEccCCccccCCCc--hhhhhhcCCcEEEEccChhhhcc
Q 014594          217 --EKPKCIFLTSPNNPDGSII-N---DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGL  287 (422)
Q Consensus       217 --~~~~~i~l~~p~NPtG~~~-~---~e~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~~~S~SK~~~~  287 (422)
                        +++++|+++..+||||... +   .+++.++++. |+++|+||+|.+|...+.  .........+   +.||||.++.
T Consensus       200 ~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~d---i~s~sK~~~~  276 (433)
T 1zod_A          200 SSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPD---ILTLSKTLGA  276 (433)
T ss_dssp             CCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS---EEEECHHHHT
T ss_pred             CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCC---EEEecccccC
Confidence              4566666544468899755 4   5556666665 999999999998864332  1222222333   3489999994


Q ss_pred             ccccceeeecCHHHHHHHHHh--c--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCcccC
Q 014594          288 AGLRVGYGAFPLSIIEYLWRA--K--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPYP  359 (422)
Q Consensus       288 ~G~r~G~i~~~~~~~~~l~~~--~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p  359 (422)
                       |+|+||+++++++++.+...  .  .+++.+++++.++.++|+..+-.+..++++++++++.+.|++    ++.+...+
T Consensus       277 -G~~ig~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~  355 (433)
T 1zod_A          277 -GLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDVR  355 (433)
T ss_dssp             -TSSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred             -CCCeeEEEEhHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence             99999999999999988763  2  457789999998888886311101455666667777776665    34333345


Q ss_pred             CCceEEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          360 SYSNFILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       360 ~~~~f~~~~~~~~--------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      +.|+|+|+++++.        .+..++.+.|.++||.+.++..++.++++||+++   +.++++++.++|+
T Consensus       356 ~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~  426 (433)
T 1zod_A          356 GRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLG  426 (433)
T ss_dssp             EETTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             EEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHH
Confidence            6788999988631        2367899999999999998875444589999864   3444444444443

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=99.97  E-value=2.4e-30  Score=249.52  Aligned_cols=313  Identities=12%  Similarity=0.096  Sum_probs=223.4

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcCCC--CCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE
Q 014594           96 DIVKIDANENPYGPPPEVREALGQLKF--PYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK  172 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~--~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~  172 (422)
                      ++++|+.+.+. ++++++.+++.+...  ...+ ...-..++++.+++++|.++++|++|+|+++++..+++.++++||+
T Consensus        14 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~gd~   92 (359)
T 1svv_A           14 KPYSFVNDYSV-GMHPKILDLMARDNMTQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLALRPWEA   92 (359)
T ss_dssp             -CEECSCSCSS-CCCHHHHHHHHHHTTCCCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHCCTTEE
T ss_pred             eeEEecCCCcC-CCCHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHHhCCCCE
Confidence            47999998777 778999999987322  1111 1223567888888889988889999999999999999999999999


Q ss_pred             EEEcCCCchhHHH--HHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC------CCeEEEEeCCCCccCcCCCHHHHHHHH
Q 014594          173 IVDCPPTFTMYEF--DAAVNGAAVVKVPRKSDFSLNVELIADAVERE------KPKCIFLTSPNNPDGSIINDEDLLKIL  244 (422)
Q Consensus       173 Vl~~~p~y~~~~~--~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~~i~l~~p~NPtG~~~~~e~l~~i~  244 (422)
                      |+++.|+|+.+..  .++..|++++.++.+ ++.+|++++++.+++.      ++++|++++| ||||.+++.+++++|+
T Consensus        93 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~  170 (359)
T 1svv_A           93 VIATQLGHISTHETGAIEATGHKVVTAPCP-DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELEDIS  170 (359)
T ss_dssp             EEEETTSHHHHSSTTHHHHTTCCEEEECCT-TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHH
T ss_pred             EEEcccchHHHHHHHHHhcCCCeeEEEeCC-CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHHHHH
Confidence            9999999998876  477899999999975 6789999999999754      3899999999 7999999966655554


Q ss_pred             ---cC-CCeEEEccCCccccCC--Cchhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc--CC--CC
Q 014594          245 ---EM-PILVVLDEAYTEFSGL--ESRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK--QP--YN  313 (422)
Q Consensus       245 ---~~-~~~li~Deay~~~~~~--~~~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~--~~--~~  313 (422)
                         +. |+++|+||+|..|..+  +.....+. .....+++.|++|..+  ..++|++++++++++.+....  ..  +.
T Consensus       171 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~  248 (359)
T 1svv_A          171 ASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGG--MFGEALIILNDALKPNARHLIKQRGALMA  248 (359)
T ss_dssp             HHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTC--SSCEEEEECSGGGCTTHHHHHHHTTCCCT
T ss_pred             HHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCCC--CCceEEEEEcccHHHHHHHHHhcCCcccc
Confidence               44 9999999999554211  11001000 0012267778899533  345799999988877665431  22  22


Q ss_pred             CcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCCCCCHHHHHHHHHhC-CcEEEe
Q 014594          314 VSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKM-GVMIRH  391 (422)
Q Consensus       314 ~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~~~~~~~~~~L~~~-gI~v~~  391 (422)
                      .+.....++.+++++..+.+.+++++++++++.+.|+ .+.+.+ .|.+++|+|++++     +++.+.|.++ ||.+.+
T Consensus       249 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~gi~v~~  322 (359)
T 1svv_A          249 KGWLLGIQFEVLMKDNLFFELGAHSNKMAAILKAGLE-ACGIRLAWPSASNQLFPILE-----NTMIAELNNDFDMYTVE  322 (359)
T ss_dssp             TTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHH-HTTCCBSSCCSSSEECBEEE-----HHHHHHHTTTEECEEEE
T ss_pred             cchhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhc-cCCeEEccCCccceEEEEcC-----HHHHHHHHHhcCEEEEe
Confidence            2333333344567764443388899999999999994 333443 4778899998885     4788889887 999943


Q ss_pred             CCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          392 YNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       392 ~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      .. ...++++||+++   +.++++++.++|++
T Consensus       323 ~~-~~~~~~iRi~~~~~~~~~~i~~~~~~l~~  353 (359)
T 1svv_A          323 PL-KDGTCIMRLCTSWATEEKECHRFVEVLKR  353 (359)
T ss_dssp             EE-TTTEEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             cc-cCCCceEEEEccCcCCHHHHHHHHHHHHH
Confidence            21 234579999875   34455555555543

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=99.97  E-value=1.4e-30  Score=255.64  Aligned_cols=308  Identities=15%  Similarity=0.173  Sum_probs=236.6

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCC
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGD  171 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd  171 (422)
                      .+++||+.+.++++  +++.+++.+. .. ..| +.++..++|++++++++.+  ++++++|+++++..+++++ +++||
T Consensus        30 ~~~id~~~~~~~~~--~~v~~a~~~~~~~-~~y~~~~~~~~l~~~la~~~~~~--~~v~~~~Gt~a~~~~l~~~~~~~gd  104 (399)
T 2oga_A           30 VPFLDLKAAYEELR--AETDAAIARVLDS-GRYLLGPELEGFEAEFAAYCETD--HAVGVNSGMDALQLALRGLGIGPGD  104 (399)
T ss_dssp             BCSCCHHHHHHHTH--HHHHHHHHHHHHH-TCCSSSHHHHHHHHHHHHHTTSS--EEEEESCHHHHHHHHHHHTTCCTTC
T ss_pred             CcccccCcCCCCCC--HHHHHHHHHHHhc-CCCCCchhHHHHHHHHHHHHCCC--eEEEecCHHHHHHHHHHHhCCCCcC
Confidence            35788988888775  8888888763 22 245 4567899999999999975  6778888899999999998 89999


Q ss_pred             EEEEcCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCe
Q 014594          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PIL  249 (422)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~  249 (422)
                      +|+++.|+|+.+...++..|++++.++.++ ++.+|++++++.++ +++++|+   |+||||.+.+.+++.++++. |++
T Consensus       105 ~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~---~~n~tG~~~~l~~i~~l~~~~~~~  180 (399)
T 2oga_A          105 EVIVPSHTYIASWLAVSATGATPVPVEPHEDHPTLDPLLVEKAIT-PRTRALL---PVHLYGHPADMDALRELADRHGLH  180 (399)
T ss_dssp             EEEEESSSCTHHHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCE
T ss_pred             EEEECCCccHHHHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcC-CCCeEEE---EeCCcCCccCHHHHHHHHHHcCCE
Confidence            999999999999999999999999999754 57899999999997 5788887   67899999999999999988 999


Q ss_pred             EEEccCCcccc-CCCchhhhhhcCCcEEEEccC--hhhhccccccceeeecC-HHHHHHHHHhcCC--------------
Q 014594          250 VVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP--------------  311 (422)
Q Consensus       250 li~Deay~~~~-~~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~--------------  311 (422)
                      +|+||+|..+. ++.....   .. .++++.|+  ||.++.+| |+||++++ +++++.+......              
T Consensus       181 li~Dea~~~g~~~~~~~~~---~~-~di~~~S~~~sK~~~~~G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~  255 (399)
T 2oga_A          181 IVEDAAQAHGARYRGRRIG---AG-SSVAAFSFYPGKNLGCFG-DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTN  255 (399)
T ss_dssp             ECEECTTCTTCEETTEETT---CT-TCEEEEECCTTSSSCCSS-CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCB
T ss_pred             EEEECcccccCccCCeecc---cc-cCEEEEeCCCCccCCcCC-ceEEEEeCCHHHHHHHHHHHhcCccccccccccccC
Confidence            99999998663 2222111   11 24788888  79999779 99999986 8888877654321              


Q ss_pred             CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcc--cCCCceEEE--EEeCCCCCHHHHHHHHHhCC
Q 014594          312 YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNP--YPSYSNFIL--CEVTSGMDAKKLKDDLAKMG  386 (422)
Q Consensus       312 ~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~~f~~--~~~~~~~~~~~~~~~L~~~g  386 (422)
                      +..+.+.+.++.++++.   ++ ..++.+++++++.+.|++++.+.+  .|+.++++|  +.+. ..+.+++.+.|.++|
T Consensus       256 ~~~~~~~~a~~~~~l~~---~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~g  331 (399)
T 2oga_A          256 SRLDEMQAAVLRIRLAH---LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVR-TERRDELRSHLDARG  331 (399)
T ss_dssp             CCCCHHHHHHHHHHHHT---HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEE-CSSHHHHHHHHHHTT
T ss_pred             CCcCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEE-CCCHHHHHHHHHHCC
Confidence            35677777777777754   33 556667778889999988754443  345566665  4443 247889999999999


Q ss_pred             cEEEeCCCCC----------------C-------CCeEEEEec---ChhhHHHHHHHHhh
Q 014594          387 VMIRHYNNKE----------------L-------KGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       387 I~v~~~~~~~----------------~-------~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      |.++++....                .       .+++||++.   +.++++++.++|++
T Consensus       332 I~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  391 (399)
T 2oga_A          332 IDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVRE  391 (399)
T ss_dssp             BCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHH
T ss_pred             CceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHH
Confidence            9998754210                0       268999987   66777777777765

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=99.97  E-value=2.7e-31  Score=257.05  Aligned_cols=305  Identities=15%  Similarity=0.091  Sum_probs=222.1

Q ss_pred             eEEcCCCCCCCCCCHHHHHHHhc-CCC-----------CCCCCCc--chHHHHHHHHHHcCCCCC-C-EEEeCCHHHHHH
Q 014594           97 IVKIDANENPYGPPPEVREALGQ-LKF-----------PYIYPDP--ESRRLRAALAKDSGLESD-H-ILVGCGADELID  160 (422)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~-~~~-----------~~~y~~~--~~~~lr~~la~~~~~~~~-~-i~~~~G~~~al~  160 (422)
                      ++.+..+  +.++++.+++++.+ +..           .++|+..  -..++++.+++++|++++ + +++|+|+++++.
T Consensus         5 ~~l~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~   82 (362)
T 2c0r_A            5 AYNFNAG--PAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFA   82 (362)
T ss_dssp             CEECCSS--SCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHH
T ss_pred             eeeccCC--CCCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHH
Confidence            3445444  57788999999876 321           2233332  146789999999998764 6 578899999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCchh--HHHHHHHcCCEEEEecCC--CCCC--CCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594          161 LIMRCVLDPGDKIVDCPPTFTM--YEFDAAVNGAAVVKVPRK--SDFS--LNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (422)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~--~~~~--~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~  234 (422)
                      .++.+++++||+|++..+.+..  +...++..| +++.++.+  ++++  +|.++++  ++ +++|+|++++|+||||.+
T Consensus        83 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~-~~t~~v~~~~~~n~tG~~  158 (362)
T 2c0r_A           83 MIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQ-DNAAYLHLTSNETIEGAQ  158 (362)
T ss_dssp             HHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CC-TTEEEEEEESEETTTTEE
T ss_pred             HHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cC-CCcCEEEEeCCcCcccee
Confidence            9999999999999888766443  235666789 99888854  2233  4666553  54 689999999999999997


Q ss_pred             CCHHHHHHHHcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh------
Q 014594          235 INDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA------  308 (422)
Q Consensus       235 ~~~e~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~------  308 (422)
                      ++  ++++|  .|+++|+|++|..+.....    +...  .+++.|+||.+|++|  +||+++++++++.+...      
T Consensus       159 ~~--~l~~i--~~~~vivD~a~~~~~~~~~----~~~~--d~~~~s~~K~~g~~G--~G~l~~~~~~~~~l~~~~~~~~~  226 (362)
T 2c0r_A          159 FK--AFPDT--GSVPLIGDMSSDILSRPFD----LNQF--GLVYAGAQKNLGPSG--VTVVIVREDLVAESPKHLPTMLR  226 (362)
T ss_dssp             CS--SCCCC--TTSCEEEECTTTTTSSCCC----GGGC--SEEEEETTTTTCCSS--CEEEEEEGGGSSSCCTTSCGGGC
T ss_pred             cc--ccccc--CCCEEEEEChhhccCCccc----hhHC--cEEEEeccccccCcC--cEEEEEcHHHHhhccccCchHHh
Confidence            54  23333  5999999999986643211    2222  377889999999888  99999998877655321      


Q ss_pred             --------cCCCCCcHHHHHHHHHHccC--Ch-HHH-HHHHHHHHHHHHHHHHccCC-CCccc----CCCceEEEEEeCC
Q 014594          309 --------KQPYNVSVAAEVAACAALQN--PI-YLE-VKEALIKERERLFKLLKDVP-FLNPY----PSYSNFILCEVTS  371 (422)
Q Consensus       309 --------~~~~~~~~~~~~aa~~~L~~--~~-~~~-~~~~~~~~~~~l~~~L~~~~-~~~~~----p~~~~f~~~~~~~  371 (422)
                              ...++++...+.++.++|+.  .. +++ ++++++++++++.+.|++++ +..+.    ...+.++++.+++
T Consensus       227 ~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (362)
T 2c0r_A          227 YDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLAS  306 (362)
T ss_dssp             HHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSC
T ss_pred             HHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCC
Confidence                    23467888888888888864  22 456 88999999999999999987 32331    1234567888875


Q ss_pred             CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          372 GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       372 ~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      +.+..++.+.|.++||.+.++...  .+++|||++   +.++++++.++|+++
T Consensus       307 ~~~~~~~~~~L~~~gi~~~~g~~~--~~~iRis~~~~~~~e~i~~l~~~l~~~  357 (362)
T 2c0r_A          307 EELEKEFVKASEQEGFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFMEHF  357 (362)
T ss_dssp             HHHHHHHHHHHHHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHCCCeeccCCCC--CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence            456788999999999988776533  468999998   567778887777653

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=99.97  E-value=5.5e-30  Score=250.20  Aligned_cols=304  Identities=18%  Similarity=0.167  Sum_probs=227.5

Q ss_pred             CCCCCC-C---HHHHHHHhc-CCCC-CCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEE
Q 014594          104 ENPYGP-P---PEVREALGQ-LKFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVD  175 (422)
Q Consensus       104 ~~~~~~-~---~~v~~al~~-~~~~-~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~  175 (422)
                      +++|++ |   +++.+++.+ +..+ ..| +.++..++|++++++++.+ +.|++++| +++++++++++ +++||+|++
T Consensus         6 ~p~f~~~p~~~~~~~~a~~~~l~~~~~~~~~~~~~~~l~~~la~~~~~~-~~i~~~sG-t~al~~~l~~l~~~~gd~Vi~   83 (388)
T 1b9h_A            6 APEFPAWPQYDDAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHGAA-HALAVTNG-THALELALQVMGVGPGTEVIV   83 (388)
T ss_dssp             CCCCCCSSCCCHHHHHHHHHHHHTSCCBTTTCSHHHHHHHHHHHHTTCS-EEEEESCH-HHHHHHHHHHTTCCTTCEEEE
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHcCCeeecCCHHHHHHHHHHHHHhCCC-eEEEeCCH-HHHHHHHHHHcCCCCcCEEEE
Confidence            456665 5   788888876 3222 233 6667899999999999975 56777766 89999999998 899999999


Q ss_pred             cCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEc
Q 014594          176 CPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLD  253 (422)
Q Consensus       176 ~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~D  253 (422)
                      +.|+|+.+...++..|++++.++.+. ++.+|++++++.++ +++++|+   |+||||.+.+.+++.++++. |+++|+|
T Consensus        84 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~-~~~~~v~---~~n~tG~~~~l~~i~~la~~~~~~li~D  159 (388)
T 1b9h_A           84 PAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVT-PRTKVIM---PVHMAGLMADMDALAKISADTGVPLLQD  159 (388)
T ss_dssp             ESSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCEE
T ss_pred             CCCccHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcC-cCceEEE---EeCCccCcCCHHHHHHHHHHcCCEEEEe
Confidence            99999999999999999999999764 47899999999997 6788877   99999999999999999988 9999999


Q ss_pred             cCCcccc-CCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHH-H--HHHHHHhcC-----------------CC
Q 014594          254 EAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-I--IEYLWRAKQ-----------------PY  312 (422)
Q Consensus       254 eay~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~-~--~~~l~~~~~-----------------~~  312 (422)
                      ++|..+. +.+.....   .+ ++.+.||||..+++|.|+||++++++ +  ++.+.....                 .+
T Consensus       160 ~a~~~g~~~~~~~~~~---~~-~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  235 (388)
T 1b9h_A          160 AAHAHGARWQGKRVGE---LD-SIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNM  235 (388)
T ss_dssp             CTTCTTCEETTEEGGG---SS-SCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBC
T ss_pred             cchhcCCccCCeeccc---cc-ceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccC
Confidence            9998643 22222221   22 47888999777777789999999875 6  566643321                 01


Q ss_pred             CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccC-------CCceEEEEEeCCC--CCHHHHHHHH
Q 014594          313 NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYP-------SYSNFILCEVTSG--MDAKKLKDDL  382 (422)
Q Consensus       313 ~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p-------~~~~f~~~~~~~~--~~~~~~~~~L  382 (422)
                      .++.+...++...+   ++++ .+++++++++++.+.|++++.+.+.+       ..++|+|+++++.  .+.+++.+.|
T Consensus       236 ~~~~~~~a~~~~~~---~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L  312 (388)
T 1b9h_A          236 RLNEFSASVLRAQL---ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDRL  312 (388)
T ss_dssp             BCBHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcCcccHHHHHHHH
Confidence            24555444443333   3455 77788889999999999885555432       3468999999742  2577899999


Q ss_pred             HhCCcEEEeCCCCC----------------------C-------CCeEEEEec----ChhhHHHHHHHHhh
Q 014594          383 AKMGVMIRHYNNKE----------------------L-------KGYVRVSVG----KPEHTDALMECLMH  420 (422)
Q Consensus       383 ~~~gI~v~~~~~~~----------------------~-------~~~iRis~~----~~~~~~~l~~al~~  420 (422)
                      .++||.++++..+.                      .       .+.+||++.    +.++++++.++|++
T Consensus       313 ~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~  383 (388)
T 1b9h_A          313 VEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIAD  383 (388)
T ss_dssp             HHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHH
T ss_pred             HHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHH
Confidence            99999998765421                      0       135999975    45566777776654

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=99.97  E-value=4e-31  Score=262.66  Aligned_cols=321  Identities=13%  Similarity=0.114  Sum_probs=221.9

Q ss_pred             CCCCCeEEcCCCCC--CCC-CCHHHHHHHhc-CCCCC-----CCCCcchHHHHHHHHHHcCCCC-CCEEEeCCHHHHHHH
Q 014594           92 RKPEDIVKIDANEN--PYG-PPPEVREALGQ-LKFPY-----IYPDPESRRLRAALAKDSGLES-DHILVGCGADELIDL  161 (422)
Q Consensus        92 ~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~~~-----~y~~~~~~~lr~~la~~~~~~~-~~i~~~~G~~~al~~  161 (422)
                      ..+++++|+..+.+  +++ .+|++.+++.+ +....     .|+.....+++++++++++... +++++++|++++++.
T Consensus        40 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~  119 (439)
T 3dxv_A           40 ENGRELIDLSGAWGAASLGYGHPAIVAAVSAAAANPAGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEA  119 (439)
T ss_dssp             TTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCSCSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHH
T ss_pred             CCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHH
Confidence            35677999998876  555 78999988875 22212     2233446789999999987655 799999999999999


Q ss_pred             HHHHh--cCCCCEEEEcCCCchhHHHHHHHcCCE-E--------------EEecCCCCCCC-----CHHHHHHHhh---c
Q 014594          162 IMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAA-V--------------VKVPRKSDFSL-----NVELIADAVE---R  216 (422)
Q Consensus       162 ~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~-~--------------~~v~~~~~~~~-----d~~~l~~~i~---~  216 (422)
                      +++.+  ..+++.|++.+|+|+.+...+...+.. .              ..++.++.+..     |+++|+++++   .
T Consensus       120 al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~  199 (439)
T 3dxv_A          120 AYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPA  199 (439)
T ss_dssp             HHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCC
Confidence            99975  335678999999997555444333222 1              22332222122     6999999983   3


Q ss_pred             CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCc--hhhhhhcCCcEEEEccChhhhcccc
Q 014594          217 EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAG  289 (422)
Q Consensus       217 ~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~~~S~SK~~~~~G  289 (422)
                      +++++|++++++|++|.+.+    .+++.++|+. |+++|+||+|.+|...+.  .....+...+++   ||||.++ +|
T Consensus       200 ~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~---s~sK~~~-~G  275 (439)
T 3dxv_A          200 GSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDIL---VLGKGLG-GG  275 (439)
T ss_dssp             TCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEE---EECGGGG-TT
T ss_pred             CCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEE---EEcchhc-CC
Confidence            57889998888999999998    7888888876 999999999998754332  222222233333   8999999 69


Q ss_pred             ccceeeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHc----cCCCCcccCCCce
Q 014594          290 LRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLK----DVPFLNPYPSYSN  363 (422)
Q Consensus       290 ~r~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~p~~~~  363 (422)
                      +|+||+++++++++.+...  ...+ .+++++.++.++|+..+..+..++++++++++.+.|+    .++.+...++.|+
T Consensus       276 ~riG~~~~~~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  354 (439)
T 3dxv_A          276 LPLSAVIAPAEILDCASAFAMQTLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGL  354 (439)
T ss_dssp             SCCEEEEEEHHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETT
T ss_pred             cceEEEEECHHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEE
Confidence            9999999999998877654  3457 8999999998888632111144445555555555444    4554445567788


Q ss_pred             EEEEEe--------CCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          364 FILCEV--------TSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       364 f~~~~~--------~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      |+++++        |...+..++.+.|+++||.++++..  .++++||+++   +.++++++.++|+
T Consensus       355 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~~~~~~t~e~i~~~l~~l~  419 (439)
T 3dxv_A          355 ACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGM--NGNVLEFTPPLTITETDIHKALDLLD  419 (439)
T ss_dssp             EEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEEST--TSCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             EEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeecCC--CCCEEEEECCCCCCHHHHHHHHHHHH
Confidence            999887        3333467888999999999998753  3589999865   3444444444443

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=99.97  E-value=1.2e-30  Score=257.71  Aligned_cols=312  Identities=16%  Similarity=0.193  Sum_probs=227.7

Q ss_pred             CCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~----~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      ..+..++|+..+.  ++++ .+|++.+++.+ +..    ...|+.+...+++++++++++  .++|++++|++++++.++
T Consensus        54 ~~g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~ggteA~~~al  131 (420)
T 2pb2_A           54 QQGKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWHTSNVFTNEPALRLGRKLIDATF--AERVLFMNSGTEANETAF  131 (420)
T ss_dssp             TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCCTTSCCHHHHHHHHHHHHHSS--CSEEEEESSHHHHHHHHH
T ss_pred             CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCC--CCeEEEeCCHHHHHHHHH
Confidence            4567789998773  5554 57889888876 222    123555557889999999998  579999999999999999


Q ss_pred             HHhcC-------CC-CEEEEcCCCchhHHH-HHHHcCCE------------EEEecCCCCCCCCHHHHHHHhhcCCCeEE
Q 014594          164 RCVLD-------PG-DKIVDCPPTFTMYEF-DAAVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPKCI  222 (422)
Q Consensus       164 ~~l~~-------~g-d~Vl~~~p~y~~~~~-~~~~~g~~------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i  222 (422)
                      +.+..       +| ++|++.+|+|+.+.. .....|.+            +..++.     .|+++|++.++ +++++|
T Consensus       132 ~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~le~~i~-~~~~~v  205 (420)
T 2pb2_A          132 KLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-----NDLHAVKAVMD-DHTCAV  205 (420)
T ss_dssp             HHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-----TCHHHHHHHCC-TTEEEE
T ss_pred             HHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-----CCHHHHHHHhc-cCceEE
Confidence            98765       67 589999999976543 33445543            555553     38999999997 689999


Q ss_pred             EEeCCCCccCc-CCCHHHHHHHHcC----CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceee
Q 014594          223 FLTSPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYG  295 (422)
Q Consensus       223 ~l~~p~NPtG~-~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i  295 (422)
                      ++++++|++|. +++.+.+++|++.    |+++|+||+|.+|...+..  ....+...+++   ||||.++ +|+|+||+
T Consensus       206 i~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~dii---t~sK~l~-~G~~iG~~  281 (420)
T 2pb2_A          206 VVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDIL---TSAKALG-GGFPVSAM  281 (420)
T ss_dssp             EECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE---EECGGGG-TTSCCEEE
T ss_pred             EEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeE---Eeccccc-CCCceEEE
Confidence            99988998884 5787777766553    9999999999887654432  22233334444   6899999 89999999


Q ss_pred             ecCHHHHHHHHH--hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC----CCCcccCCCceEEEEEe
Q 014594          296 AFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV----PFLNPYPSYSNFILCEV  369 (422)
Q Consensus       296 ~~~~~~~~~l~~--~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~f~~~~~  369 (422)
                      ++++++++.+..  ....++.|++++.++.++|+..+..+..++++++++++.+.|+++    +.+...++.|+|+++++
T Consensus       282 ~~~~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~v~~  361 (420)
T 2pb2_A          282 LTTQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAEL  361 (420)
T ss_dssp             EECHHHHTTCC----CCEECCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEE
T ss_pred             EEhHHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecceEEEEEE
Confidence            999998776654  234477899999998888864222226777888888888888764    33222345688999998


Q ss_pred             CCCC--CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          370 TSGM--DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       370 ~~~~--~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      +...  +..++.+.|.++||.++++.    ++++||+++   +.++++++.++|+
T Consensus       362 ~~~~~~~~~~l~~~l~~~Gi~v~~~~----~~~iRl~~~~~~t~eei~~~~~~l~  412 (420)
T 2pb2_A          362 KPKYKGRARDFLYAGAEAGVMVLNAG----ADVMRFAPSLVVEEADIHEGMQRFA  412 (420)
T ss_dssp             CGGGTTCHHHHHHHHHHTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHCCCEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHH
Confidence            7432  68899999999999999875    589999954   4555555555554

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=99.97  E-value=1.7e-30  Score=257.09  Aligned_cols=278  Identities=14%  Similarity=0.110  Sum_probs=216.0

Q ss_pred             EcCCCCCCCCCCHHHHHHHhc-CCCCCCCCC--cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 014594           99 KIDANENPYGPPPEVREALGQ-LKFPYIYPD--PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVD  175 (422)
Q Consensus        99 ~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~--~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~  175 (422)
                      +|+.+++++++|+++.+++.+ +.. ..|+.  .+..++|++++++++.  +++++|+|+++++..+++++. +||+|++
T Consensus        20 ~l~~~~p~~~~p~~~~~a~~~~~~~-~~y~~~~~~~~~l~~~la~~~~~--~~v~~~~ggt~al~~~l~~l~-~gd~Vlv   95 (424)
T 2po3_A           20 PLLVGRPNRIDRARLYERLDRALDS-QWLSNGGPLVREFEERVAGLAGV--RHAVATCNATAGLQLLAHAAG-LTGEVIM   95 (424)
T ss_dssp             CEETTCCCCCCHHHHHHHHHHHHHH-TCCSSSCHHHHHHHHHHHHHHTS--SEEEEESCHHHHHHHHHHHHT-CCSEEEE
T ss_pred             cccccCCCCCChHHHHHHHHHHHhc-CCcccCCHHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHcC-CCCEEEE
Confidence            688899999998999988876 332 35765  5789999999999996  589999999999999999875 7899999


Q ss_pred             cCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEc
Q 014594          176 CPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLD  253 (422)
Q Consensus       176 ~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~D  253 (422)
                      +.|+|..+...++..|++++.++.++ ++.+|++++++.++ +++++|+++|   |||...+.+++.++++. |+++|+|
T Consensus        96 ~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~---~tG~~~~l~~i~~la~~~~~~li~D  171 (424)
T 2po3_A           96 PSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVT-PRTSAVVGVH---LWGRPCAADQLRKVADEHGLRLYFD  171 (424)
T ss_dssp             ESSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCC-TTEEEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEE
T ss_pred             CCCccHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhhC-cCCcEEEEEC---CCCCcCCHHHHHHHHHHcCCEEEEE
Confidence            99999999999999999999999764 67899999999997 5899999864   89999999999999987 9999999


Q ss_pred             cCCcc-ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcCC-----C---------CCcHH
Q 014594          254 EAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP-----Y---------NVSVA  317 (422)
Q Consensus       254 eay~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~-----~---------~~~~~  317 (422)
                      |+|.. +.+++....   ...+ +++.||||..+++|+|+||++++ +++++.+......     +         ..+.+
T Consensus       172 ea~~~g~~~~~~~~~---~~~d-i~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~  247 (424)
T 2po3_A          172 AAHALGCAVDGRPAG---SLGD-AEVFSFHATKAVNAFEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEA  247 (424)
T ss_dssp             CTTCTTCEETTEETT---SSSS-EEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHH
T ss_pred             CccccCCeECCeecc---cccC-EEEEeCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHH
Confidence            99994 544332221   1223 88999996667778999999998 8998888764332     1         12333


Q ss_pred             HHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccC--CCc----eEEEEEeCC---CCCHHHHHHHHHhCCc
Q 014594          318 AEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYP--SYS----NFILCEVTS---GMDAKKLKDDLAKMGV  387 (422)
Q Consensus       318 ~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p--~~~----~f~~~~~~~---~~~~~~~~~~L~~~gI  387 (422)
                      ...++..   ..++++ ..++.+++++++.+.|++++.+.+.+  .++    .++++.+++   +.+.+++.+.|.++||
T Consensus       248 ~aa~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~L~~~gI  324 (424)
T 2po3_A          248 AAAMGLT---SLDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEATTGIHRDLVMEVLKAEGV  324 (424)
T ss_dssp             HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHHHSSCHHHHHHHHHHTTE
T ss_pred             HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCccchhhHHHHHHHHHHCCC
Confidence            3333332   223455 77777888889999998875555433  222    234477764   5678999999999999


Q ss_pred             EEEe
Q 014594          388 MIRH  391 (422)
Q Consensus       388 ~v~~  391 (422)
                      .+++
T Consensus       325 ~v~~  328 (424)
T 2po3_A          325 HTRA  328 (424)
T ss_dssp             ECBC
T ss_pred             ceec
Confidence            9987

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=99.97  E-value=2.1e-30  Score=258.58  Aligned_cols=322  Identities=12%  Similarity=0.075  Sum_probs=222.0

Q ss_pred             CCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      .++++++|+..|  .++++ .+|++.+++.+ +...    ..|+.+...+++++++++++.+.+ |++|+|++++++.++
T Consensus        46 ~~g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~-v~~~~ggseA~~~al  124 (452)
T 3n5m_A           46 IQGKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSYFPMSQSHEPAIKLAEKLNEWLGGEYV-IFFSNSGSEANETAF  124 (452)
T ss_dssp             TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCCCCTTSEEHHHHHHHHHHHHHHTSCEE-EEEESSHHHHHHHHH
T ss_pred             CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHHhCCCCce-EEEeCchHHHHHHHH
Confidence            456789999988  35554 46999988876 3221    234445567899999999987666 999999999999999


Q ss_pred             HHhc-----C---CCCEEEEcCCCchhHHHHHHHcCCE-------------EEEecCCCCCCC---C---------HHHH
Q 014594          164 RCVL-----D---PGDKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSDFSL---N---------VELI  210 (422)
Q Consensus       164 ~~l~-----~---~gd~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~---d---------~~~l  210 (422)
                      +.++     .   ++|+|++..|+|+.+...+...+..             +..++....+..   |         +++|
T Consensus       125 ~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  204 (452)
T 3n5m_A          125 KIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEV  204 (452)
T ss_dssp             HHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHH
Confidence            9876     5   7799999999998776555544322             334442111111   2         8999


Q ss_pred             HHHhh---cCCCeEEEEeCC-CCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEc
Q 014594          211 ADAVE---REKPKCIFLTSP-NNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLR  279 (422)
Q Consensus       211 ~~~i~---~~~~~~i~l~~p-~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~  279 (422)
                      ++.++   .+++++|+++++ +| ||.+.+    .+++.++|+. |+++|+||+|.+|...+..  ....+...+   +.
T Consensus       205 e~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~d---i~  280 (452)
T 3n5m_A          205 DRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPD---II  280 (452)
T ss_dssp             HHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCS---EE
T ss_pred             HHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCC---EE
Confidence            99886   356778888877 89 998885    5666666666 9999999999988654322  122222223   33


Q ss_pred             cChhhhcccc-ccceeeecCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHH
Q 014594          280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLF  346 (422)
Q Consensus       280 S~SK~~~~~G-~r~G~i~~~~~~~~~l~~--------~~~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~  346 (422)
                      +|||.++. | +|+||+++++++++.+..        ...+++.++++++++.++|+.   +++.+ .++.....++.|.
T Consensus       281 t~sK~l~~-G~~~ig~~~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~  359 (452)
T 3n5m_A          281 TMAKGITS-AYLPLSATAVKREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLK  359 (452)
T ss_dssp             EECGGGGT-TSSCCEEEEEEHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred             eecccccC-CCcceEEEEECHHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence            68999985 9 999999999999988743        223578899999999998873   33333 4444444445555


Q ss_pred             HHHccCCCCcccCCCceEEEEEeCCCC---------CHHHHHHHHHhCCcEEEeCCC--CCCCCeEEEEecC---hhhHH
Q 014594          347 KLLKDVPFLNPYPSYSNFILCEVTSGM---------DAKKLKDDLAKMGVMIRHYNN--KELKGYVRVSVGK---PEHTD  412 (422)
Q Consensus       347 ~~L~~~~~~~~~p~~~~f~~~~~~~~~---------~~~~~~~~L~~~gI~v~~~~~--~~~~~~iRis~~~---~~~~~  412 (422)
                      +.+++++.+...+..|.|+++++....         ...++.+.|+++||.++++..  ...++++||+++.   .++++
T Consensus       360 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~  439 (452)
T 3n5m_A          360 EEIGEHPLVGDIRGKGLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAPPLVISSEEIA  439 (452)
T ss_dssp             HHHTTCTTEEEEEESSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECCCTTCCHHHHH
T ss_pred             HHHhcCCCeEEEEEEEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEECCCCCCHHHHH
Confidence            555556655455677888888774211         135688888999999998774  3346899997653   44444


Q ss_pred             HHHHHHh
Q 014594          413 ALMECLM  419 (422)
Q Consensus       413 ~l~~al~  419 (422)
                      ++.++|+
T Consensus       440 ~~l~~l~  446 (452)
T 3n5m_A          440 FVIGTLK  446 (452)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            4444443

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=99.97  E-value=1e-29  Score=248.59  Aligned_cols=307  Identities=17%  Similarity=0.189  Sum_probs=232.7

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEE
Q 014594           96 DIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKI  173 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~V  173 (422)
                      ++|+|+.  +.+  ++++.+++.+ +.....++.++..++|++++++++.  +++++++|+++++..+++++ +++||+|
T Consensus         9 ~~i~~~~--p~~--~~~~~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~al~~~~~~~~~~~gd~V   82 (393)
T 1mdo_A            9 DFLPFSR--PAM--GAEELAAVKTVLDSGWITTGPKNQELEAAFCRLTGN--QYAVAVSSATAGMHIALMALGIGEGDEV   82 (393)
T ss_dssp             CCBCSCC--CCC--CHHHHHHHHHHHHHTCCSSSHHHHHHHHHHHHHHCC--SEEEEESCHHHHHHHHHHHTTCCTTCEE
T ss_pred             cccccCC--CCC--CHHHHHHHHHHHhcCCcCCChHHHHHHHHHHHHhCC--CcEEEecChHHHHHHHHHHcCCCCCCEE
Confidence            4677775  333  4677788766 3222223566789999999999996  48999999999999999999 8999999


Q ss_pred             EEcCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEE
Q 014594          174 VDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVV  251 (422)
Q Consensus       174 l~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li  251 (422)
                      +++.|+|..+...++..|++++.++.++ ++.+|++++++.++ .++++|+++   ||||.+.+.+++.++++. |+++|
T Consensus        83 l~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li  158 (393)
T 1mdo_A           83 ITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAIT-PQTKAIIPV---HYAGAPADLDAIYALGERYGIPVI  158 (393)
T ss_dssp             EEESSSCHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCC-TTEEEECCB---CGGGCCCCHHHHHHHHHHHTCCBC
T ss_pred             EeCCCccHhHHHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcC-CCceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEE
Confidence            9999999999999999999999999754 46799999999997 588998865   489999999999999987 99999


Q ss_pred             EccCCcccc-CCCchhhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcCC------------------
Q 014594          252 LDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP------------------  311 (422)
Q Consensus       252 ~Deay~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~------------------  311 (422)
                      +||+|..+. +.....   ..  .++++.||||..+++|.|+||++++ +++++.+......                  
T Consensus       159 ~D~a~~~g~~~~~~~~---~~--~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  233 (393)
T 1mdo_A          159 EDAAHATGTSYKGRHI---GA--RGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQA  233 (393)
T ss_dssp             EECTTCTTCEETTEET---TS--SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC-----------CC
T ss_pred             EECccccCCeECCeec---CC--CCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccc
Confidence            999999642 222211   11  5688999994444556699999996 8888887754321                  


Q ss_pred             --------CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCccc--C-----CCceEEEEEeCC---C
Q 014594          312 --------YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPY--P-----SYSNFILCEVTS---G  372 (422)
Q Consensus       312 --------~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~--p-----~~~~f~~~~~~~---~  372 (422)
                              +..+.+...++...++.   ++ ..++.+++++++.+.|++++ +.+.  +     ..++++|+++++   +
T Consensus       234 ~~~~~g~~~~~~~~~~a~~~~~l~~---~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~  309 (393)
T 1mdo_A          234 EVLAPGYKYNLPDLNAAIALAQLQK---LDALNARRAAIAAQYHQAMADLP-FQPLSLPSWEHIHAWHLFIIRVDEARCG  309 (393)
T ss_dssp             EESSCCCBCCCCHHHHHHHHHHHHT---HHHHHHHHHHHHHHHHHHHHTSS-CEECCCCSSCEECCCSCEEEECCHHHHS
T ss_pred             cccccCccCCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCCCceeEEEEEEecccccc
Confidence                    12355555544444432   34 66666778899999999887 4432  2     345678999974   5


Q ss_pred             CCHHHHHHHHHhCCcEEEeCCCC--------------CC-------CCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          373 MDAKKLKDDLAKMGVMIRHYNNK--------------EL-------KGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       373 ~~~~~~~~~L~~~gI~v~~~~~~--------------~~-------~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      .+.+++.+.|.++||.++++..+              ..       .+++||++.   +.++++++.++|+.+
T Consensus       310 ~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~  382 (393)
T 1mdo_A          310 ITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQI  382 (393)
T ss_dssp             SCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHH
Confidence            68899999999999999886532              11       348999998   677778888777653

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=99.97  E-value=1.4e-30  Score=260.34  Aligned_cols=321  Identities=13%  Similarity=0.087  Sum_probs=229.0

Q ss_pred             CCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-C---CCC---CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-L---KFP---YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~---~~~---~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      .+++++||+..|  .++++ .+|++.+++.+ +   ...   ..|+.+...+|+++++++++.+.++|++|+|++++++.
T Consensus        48 ~~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~  127 (460)
T 3gju_A           48 NNGRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLAYYHAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANET  127 (460)
T ss_dssp             TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHSCCCCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHH
T ss_pred             CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHH
Confidence            456789999887  45565 46888888765 2   111   23455556789999999988778899999999999999


Q ss_pred             HHHHhcC--------CCCEEEEcCCCchhHHHHHHHcCC-------------EEEEecCC-----CCCCCC--------H
Q 014594          162 IMRCVLD--------PGDKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRK-----SDFSLN--------V  207 (422)
Q Consensus       162 ~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~-----~~~~~d--------~  207 (422)
                      +++.+..        ++++|++..|+|+.+...+...+.             .+..++..     ++++.+        +
T Consensus       128 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~  207 (460)
T 3gju_A          128 NIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCA  207 (460)
T ss_dssp             HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHH
Confidence            9998763        468999999999876655443321             24444422     222344        5


Q ss_pred             HHHHHHhhc---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEE
Q 014594          208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV  277 (422)
Q Consensus       208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~  277 (422)
                      ++|++.+.+   +++++|+++.++|++|.+.+    .+++.++|+. |+++|+||+|.+|...+..  ....+...++  
T Consensus       208 ~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi--  285 (460)
T 3gju_A          208 DKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDL--  285 (460)
T ss_dssp             HHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSE--
T ss_pred             HHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCe--
Confidence            888888863   45678887777888888555    5666666665 9999999999988644321  2222223333  


Q ss_pred             EccChhhhcccc-ccceeeecCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHH
Q 014594          278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERE  343 (422)
Q Consensus       278 ~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~  343 (422)
                       .+|||.++ +| +|+||+++++++++.+..         ...+|+.++++++++.++|+   ++++.+ .++.....++
T Consensus       286 -~t~sK~l~-gG~~~lg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~  363 (460)
T 3gju_A          286 -ITIAKGLT-SAYAPLSGVIVADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRA  363 (460)
T ss_dssp             -EEECGGGT-TTSSCCEEEEEEHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred             -eeeehhhc-CCCCCeEEEEECHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence             36889987 46 899999999999998863         22357889999999999987   345555 6666777777


Q ss_pred             HHHHHHccCCCCcccCCCceEEEEEeCCCCC-----------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chh
Q 014594          344 RLFKLLKDVPFLNPYPSYSNFILCEVTSGMD-----------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPE  409 (422)
Q Consensus       344 ~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~-----------~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~  409 (422)
                      .+.+.+++++.+...+..|.|+++++....+           ..++.+.|+++||.++++.   .++++||++.   +.+
T Consensus       364 ~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---~~~~iRi~~~~~~t~e  440 (460)
T 3gju_A          364 ELAKAVGGHKNVGEVRGDGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMP---QGDILGFAPPLCLTRE  440 (460)
T ss_dssp             HHHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECS---SSCEEEECCCTTCCHH
T ss_pred             HHHHHHhcCCCeEEEeeeeEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCC---CCCEEEEECCCCCCHH
Confidence            7877787777655556778899998863221           5678899999999999875   3589999954   445


Q ss_pred             hHHHHHHHHh
Q 014594          410 HTDALMECLM  419 (422)
Q Consensus       410 ~~~~l~~al~  419 (422)
                      +++++.++|+
T Consensus       441 ~i~~~l~~l~  450 (460)
T 3gju_A          441 QADIVVSKTA  450 (460)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            5555555444

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.97  E-value=1.1e-30  Score=259.19  Aligned_cols=317  Identities=15%  Similarity=0.094  Sum_probs=219.6

Q ss_pred             CCCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CC--CCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~--~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~  164 (422)
                      +.++++++|+..+.  ++++ .+|++.+++.+ +.  ...+||++...+|+++++++++ .+++|++++|++++++.+++
T Consensus        51 d~~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~~~v~~~~sGsea~~~ai~  129 (434)
T 3l44_A           51 DVDGNKYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGTPTALEVKFAKMLKEAMP-ALDKVRFVNSGTEAVMTTIR  129 (434)
T ss_dssp             ETTCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHCT-TCSEEEEESSHHHHHHHHHH
T ss_pred             ECCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHhCC-CCCEEEEeCchHHHHHHHHH
Confidence            34577899998875  5666 58999988875 22  2245788788899999999997 68899999999999999999


Q ss_pred             HhcC--CCCEEEEcCCCchhHHHHHHHcCC-EEEE--ecCCCCC------------CCCHHHHHHHhhc--CCCeEEEEe
Q 014594          165 CVLD--PGDKIVDCPPTFTMYEFDAAVNGA-AVVK--VPRKSDF------------SLNVELIADAVER--EKPKCIFLT  225 (422)
Q Consensus       165 ~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~-~~~~--v~~~~~~------------~~d~~~l~~~i~~--~~~~~i~l~  225 (422)
                      .+..  ++++|++..|+|+.+...+...+. ....  .|...+.            .-|++++++++++  +++++|+++
T Consensus       130 ~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~e  209 (434)
T 3l44_A          130 VARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAILVE  209 (434)
T ss_dssp             HHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEEC
T ss_pred             HHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEEEc
Confidence            7654  678999999999765443322221 1111  1111110            0189999998864  356677766


Q ss_pred             CCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceeeecC
Q 014594          226 SPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (422)
Q Consensus       226 ~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~  298 (422)
                      +++|++|.+.+    .+++.++|+. |+++|+||+|.+| ..+..  ....+...+   +.||||.++ +|+|+||++++
T Consensus       210 p~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~~~d---i~t~sK~~~-~G~~iG~~~~~  284 (434)
T 3l44_A          210 PIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQDLLGVTPD---LTALGKVIG-GGLPIGAYGGK  284 (434)
T ss_dssp             SSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTCCCS---EEEEEGGGG-TTSSCEEEEEC
T ss_pred             CCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHHHcCCCCC---eeehhhhhc-CCcCeeeEEEc
Confidence            66777888886    7778888877 9999999999988 43321  222222233   447899998 89999999999


Q ss_pred             HHHHHHHHH-----hcCCCCCcHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHc----cCCCCcccCCCceEEE
Q 014594          299 LSIIEYLWR-----AKQPYNVSVAAEVAACAALQN---PIYLEVKEALIKERERLFKLLK----DVPFLNPYPSYSNFIL  366 (422)
Q Consensus       299 ~~~~~~l~~-----~~~~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~p~~~~f~~  366 (422)
                      +++++.+..     ...+++.+++++.++.++|+.   ++   ..++++++++++.+.|+    .++.....+..++|++
T Consensus       285 ~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~  361 (434)
T 3l44_A          285 KEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEG---LYEKLDELGATLEKGILEQAAKHNIDITLNRLKGALT  361 (434)
T ss_dssp             HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTT---HHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEETTEEE
T ss_pred             HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHccc---HHHHHHHHHHHHHHHHHHHHHhCCCCEEEEeeccEEE
Confidence            999988765     234588899999999988863   33   33444444444444444    4554444566788998


Q ss_pred             EEeCCC-------------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHhh
Q 014594          367 CEVTSG-------------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLMH  420 (422)
Q Consensus       367 ~~~~~~-------------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~~  420 (422)
                      +.+...             .+..++.+.|+++||.++++.    .+++|+++. +.++++++.++|++
T Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~rl~~~~t~e~i~~~l~~l~~  425 (434)
T 3l44_A          362 VYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPSK----YEAWFLTTEHTKEDIEYTIEAVGR  425 (434)
T ss_dssp             EEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCSST----TCCEECCTTCCHHHHHHHHHHHHH
T ss_pred             EEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEeecC----CCcEEEecccCHHHHHHHHHHHHH
Confidence            887421             123678888999999999875    367899865 34455555555443

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.97  E-value=6.5e-31  Score=253.94  Aligned_cols=316  Identities=15%  Similarity=0.022  Sum_probs=226.3

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE--
Q 014594           96 DIVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK--  172 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~--  172 (422)
                      ..+.+..++|+++++|++.+++.+......| ++++..+++++++++++.+.  .++++|+++++..++++++.+||.  
T Consensus        14 ~~~~~~~~~~~~g~~p~v~~ai~~~~~~~~~~~~~~~~~l~~~la~~~~~~~--~i~~~~g~~a~~~a~~~~~~~g~~~v   91 (359)
T 3pj0_A           14 PYKLGGNGPRNVGVLTEALQNIDDNLESDIYGNGAVIEDFETKIAKILGKQS--AVFFPSGTMAQQIALRIWADRKENRR   91 (359)
T ss_dssp             SEESSSSSCCBHHHHHHHTTTSCTTCBCCBTTBSHHHHHHHHHHHHHHTCSE--EEEESCHHHHHHHHHHHHHHHHTCCE
T ss_pred             chhhcCCCccccCCCHHHHHHHHhhcccCcccCCHHHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHHHhcCCCcE
Confidence            4477788899999999999998873222344 66788999999999999753  355588889999999999888886  


Q ss_pred             EEEcCCCchhHH---HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCcc-CcCCCHHHHHHHHc---
Q 014594          173 IVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD-GSIINDEDLLKILE---  245 (422)
Q Consensus       173 Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt-G~~~~~e~l~~i~~---  245 (422)
                      |+++.+.|....   ..+...|++++.++. +++.+|+++++++ . +++++|++++|+||+ |.+++.+++++|++   
T Consensus        92 vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~d~~~l~~~-~-~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~  168 (359)
T 3pj0_A           92 VAYHPLSHLEIHEQDGLKELQQITPLLLGT-ANQLLTIDDIKSL-R-EPVSSVLIELPQREIGGQLPAFEELEKISEYCH  168 (359)
T ss_dssp             EEECTTCHHHHSSTTHHHHHHCCEEEECSC-TTSCCCHHHHHTC-S-SCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHH
T ss_pred             EEEeccceeeehhcchHHHhcCceEEecCC-cCCCcCHHHHHhc-c-CCceEEEEEecccCCCcccCCHHHHHHHHHHHH
Confidence            555656554321   223457999999987 4568999999998 4 789999999999998 79999999966654   


Q ss_pred             C-CCeEEEccCCccccC--CCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC----CCCcHHH
Q 014594          246 M-PILVVLDEAYTEFSG--LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----YNVSVAA  318 (422)
Q Consensus       246 ~-~~~li~Deay~~~~~--~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~----~~~~~~~  318 (422)
                      . |+++|+|++|..+..  .+.....+.. ...+++.|+||.++.++ + ||+++++++++.+......    .......
T Consensus       169 ~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~d~~~~s~sK~~~~~~-g-g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  245 (359)
T 3pj0_A          169 EQGISLHLDGARLWEITPFYQKSAEEICA-LFDSVYVSFYKGIGGIA-G-AILAGNDDFVQEAKIWKRRYGGDLISLYPY  245 (359)
T ss_dssp             HHTCEEEEEETTCGGGHHHHTCCHHHHHT-TCSEEEEESSSTTCCSS-C-EEEEECHHHHHHHHHHHHHTTCCCSCCHHH
T ss_pred             HcCCEEEEECcchhcchhhhCCCHHHhhc-cCCEEEEeccccCCCcc-e-EEEECCHHHHHHHHHHHHHhCCCcchhHHH
Confidence            3 999999999875431  1111111212 22255668999887553 2 8888999999988764321    1122233


Q ss_pred             HHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcc--cCCCceEEEEEeCCC--CCHHHHHHHHHhCCcEEEeCCC
Q 014594          319 EVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNP--YPSYSNFILCEVTSG--MDAKKLKDDLAKMGVMIRHYNN  394 (422)
Q Consensus       319 ~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~~f~~~~~~~~--~~~~~~~~~L~~~gI~v~~~~~  394 (422)
                      +.++..++++.  .+..+++.++++++.+.|++++.+.+  .|+.++|+|++++..  .+.+++.+.|.++||.++++..
T Consensus       246 ~~a~~~~l~~~--~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~  323 (359)
T 3pj0_A          246 ILSADYYFEKR--IGKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQ  323 (359)
T ss_dssp             HHHHHHHHHHH--GGGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCE
T ss_pred             HHHHHHHHHHH--HHHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccchhHHHHHHHHHhcCcEecCCcc
Confidence            33333445332  23344567888999999999865654  468899999998632  2467888899999999999865


Q ss_pred             C--CCCCeEEEEecC---hhhHHHHHHHHhhh
Q 014594          395 K--ELKGYVRVSVGK---PEHTDALMECLMHL  421 (422)
Q Consensus       395 ~--~~~~~iRis~~~---~~~~~~l~~al~~l  421 (422)
                      +  ...+++|++++.   ..+.+++.+++++|
T Consensus       324 ~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l  355 (359)
T 3pj0_A          324 EKSADVCAFEVSVGDAFAEIPAKNLELVFRCL  355 (359)
T ss_dssp             EEETTEEEEEEECCTTGGGSCHHHHHHHHHHH
T ss_pred             ccCCCceEEEEEecCccccCCHHHHHHHHHHH
Confidence            3  235689999863   23467888888876

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=99.97  E-value=5.7e-30  Score=251.13  Aligned_cols=307  Identities=14%  Similarity=0.115  Sum_probs=222.9

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcC---CC--CCCCCCc--chHHHHHHHHHHcCCC-CCCEEE-eCCHHHHHHHHHHHh
Q 014594           96 DIVKIDANENPYGPPPEVREALGQL---KF--PYIYPDP--ESRRLRAALAKDSGLE-SDHILV-GCGADELIDLIMRCV  166 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~---~~--~~~y~~~--~~~~lr~~la~~~~~~-~~~i~~-~~G~~~al~~~~~~l  166 (422)
                      +++++.  .++.++++++++++.+.   ..  .+.||+.  ...++|+++++++|++ +++|++ |+|++++++++++++
T Consensus        40 ~~~~~~--~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l  117 (398)
T 2fyf_A           40 RDGRFG--SGPSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGL  117 (398)
T ss_dssp             SSCBCC--SSSCCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHT
T ss_pred             CCcccc--CCCCCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHh
Confidence            345555  45667789999998762   11  1344443  2578999999999997 468998 999999999999999


Q ss_pred             cCCCCEEEEcCCCchh-HHHHHHHc--CCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594          167 LDPGDKIVDCPPTFTM-YEFDAAVN--GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (422)
Q Consensus       167 ~~~gd~Vl~~~p~y~~-~~~~~~~~--g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i  243 (422)
                      +++| .+++..+.|.. ....+...  |++++.++.++++..+.     .++ +++++|++++|+||||.+++.+++.++
T Consensus       118 ~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~g~~~~~-----~i~-~~~~~v~~~~~~nptG~~~~~~~i~~~  190 (398)
T 2fyf_A          118 IDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSDPGSAPEP-----QTD-PSVDVIAWAHNETSTGVAVAVRRPEGS  190 (398)
T ss_dssp             CSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECCTTCCCCC-----CCC-TTCSEEEEESEETTTTEECCCCCCTTC
T ss_pred             cCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecCCCCCCCc-----ccc-CCCCEEEEeCcCCCcceecchHHhhhh
Confidence            9887 22334444421 22244555  88888888665444442     244 689999999999999999999988877


Q ss_pred             HcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh---------------
Q 014594          244 LEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---------------  308 (422)
Q Consensus       244 ~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~---------------  308 (422)
                        .|+++|+||+|..+.....    +.  +.++++.|+||.+|++| ++||+++++++++.+.+.               
T Consensus       191 --~~~~vivD~a~~~~~~~~~----~~--~~di~~~s~sK~~~~~g-g~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~  261 (398)
T 2fyf_A          191 --DDALVVIDATSGAGGLPVD----IA--ETDAYYFAPQKNFASDG-GLWLAIMSPAALSRIEAIAATGRWVPDFLSLPI  261 (398)
T ss_dssp             --C-CEEEEECTTTTTTSCCC----GG--GCSEEEECTTSTTCSCS-SEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHH
T ss_pred             --cCCeEEEEeccccCCcccC----cc--cCcEEEEecCcccCCCC-ceEEEEECHHHHHHhhcccccCCCCCcEEehHH
Confidence              6999999999987653211    11  13478899999999775 699999999998877432               


Q ss_pred             --------cCCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCccc---C-CCce-EEEEEeCC
Q 014594          309 --------KQPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPY---P-SYSN-FILCEVTS  371 (422)
Q Consensus       309 --------~~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~---p-~~~~-f~~~~~~~  371 (422)
                              ...++.+...+.++.++|+.   .++++ .+++++++++++.+.|++++++.+.   | ..++ ++|+++|+
T Consensus       262 ~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~  341 (398)
T 2fyf_A          262 AVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVD  341 (398)
T ss_dssp             HHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECT
T ss_pred             HhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCC
Confidence                    12345677777777777754   12255 8889999999999999988545544   3 1345 89999987


Q ss_pred             CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          372 GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       372 ~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      +.+..++.+.|.++||.++++.....++++||+++   +.++++++.++|++
T Consensus       342 ~~~~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~  393 (398)
T 2fyf_A          342 DVDAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDW  393 (398)
T ss_dssp             TSCHHHHHHHHHHTTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHCCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHH
Confidence            77899999999988999987643223589999998   66677777777654

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=99.97  E-value=3.4e-30  Score=255.50  Aligned_cols=314  Identities=15%  Similarity=0.130  Sum_probs=218.5

Q ss_pred             CCCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      ..++..++|+..|  .++++ ++|++.+++.+ +...    ..|+.+...+++++++++++  .++|++++|++++++.+
T Consensus        61 d~~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~sGseA~~~a  138 (433)
T 1z7d_A           61 DVNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSRAFFSVPLGICERYLTNLLG--YDKVLMMNTGAEANETA  138 (433)
T ss_dssp             ETTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEEHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHH
T ss_pred             ECCCCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCCCccCCcCCHHHHHHHHHHHhhcC--CCeEEEeCCHHHHHHHH
Confidence            3456788999876  46777 88999999876 3221    23444456789999999997  57999999999999999


Q ss_pred             HHHhc---------CCC-CEEEEcCCCchhHHHH-HHHcC------------CEEEEecCCCCCCCCHHHHHHHhhcCCC
Q 014594          163 MRCVL---------DPG-DKIVDCPPTFTMYEFD-AAVNG------------AAVVKVPRKSDFSLNVELIADAVEREKP  219 (422)
Q Consensus       163 ~~~l~---------~~g-d~Vl~~~p~y~~~~~~-~~~~g------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~  219 (422)
                      ++.+.         .+| |+|++.+|+|+.+... ....|            ..++.+|.     .|++++++.++.+++
T Consensus       139 l~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-----~d~~~le~~l~~~~~  213 (433)
T 1z7d_A          139 YKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-----DDLEALEEELKDPNV  213 (433)
T ss_dssp             HHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-----TCHHHHHHHHTSTTE
T ss_pred             HHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-----CCHHHHHHHhCCCCE
Confidence            98653         467 9999999999865432 22233            24445543     389999999943678


Q ss_pred             eEEEEeCCCCccCcCC----CHHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhcccc-cc
Q 014594          220 KCIFLTSPNNPDGSII----NDEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG-LR  291 (422)
Q Consensus       220 ~~i~l~~p~NPtG~~~----~~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G-~r  291 (422)
                      ++|+++..+|++|.+.    ..+++.++|+. |+++|+||+|.+|...+..  ....+...+++   ||||.++ +| +|
T Consensus       214 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~---t~sK~l~-~G~~~  289 (433)
T 1z7d_A          214 CAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVI---LLGKALS-GGHYP  289 (433)
T ss_dssp             EEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG-TTSSC
T ss_pred             EEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCEE---EECcccc-CCCCC
Confidence            8887776677899865    45666666665 9999999999987643322  12222233333   8899998 89 99


Q ss_pred             ceeeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC----CCCcccCCCceEE
Q 014594          292 VGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV----PFLNPYPSYSNFI  365 (422)
Q Consensus       292 ~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~f~  365 (422)
                      +||+++++++++.+...  ...|+.|+++++++.++|+..+..+..++++++++++.+.|+++    +.+...++.++|+
T Consensus       290 ~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~g~~~  369 (433)
T 1z7d_A          290 ISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLC  369 (433)
T ss_dssp             CEEEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEE
T ss_pred             eEEEEECHHHHhhhccccccccCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeeeEE
Confidence            99999999988776542  33477899999888888864211115667777788887777654    3222235678899


Q ss_pred             EEEeCCC-CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          366 LCEVTSG-MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       366 ~~~~~~~-~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      ++++++. .+..++.+.|.++||.++++.    ++++||+++   +.++++++.++|+
T Consensus       370 ~i~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~  423 (433)
T 1z7d_A          370 AIEFKNELVNVLDICLKLKENGLITRDVH----DKTIRLTPPLCITKEQLDECTEIIV  423 (433)
T ss_dssp             EEEECTTTCCHHHHHHHHHHTTEECCEET----TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             EEEEccChhHHHHHHHHHHHCCeEEecCC----CCEEEEECCcCCCHHHHHHHHHHHH
Confidence            9999753 468899999999999999863    589999875   4455555555544

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=99.97  E-value=2.6e-30  Score=258.34  Aligned_cols=319  Identities=13%  Similarity=0.111  Sum_probs=225.1

Q ss_pred             CCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-C---C--CC-CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-L---K--FP-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~---~--~~-~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      .++++++|+.+|  .++++ .+|++.+++.+ +   .  +. ..|+.+...+++++++++++.+.++|++++|++++++.
T Consensus        47 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~  126 (459)
T 4a6r_A           47 SEGNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELPFYNTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDT  126 (459)
T ss_dssp             TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHH
T ss_pred             CCCCEEEECCCchhcccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHH
Confidence            456789999887  56665 46889888865 2   2  11 13455557789999999998888899999999999999


Q ss_pred             HHHHhcC--------CCCEEEEcCCCchhHHHHHHHcCC-------------EEEEecCCC-----CCCCC--------H
Q 014594          162 IMRCVLD--------PGDKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKS-----DFSLN--------V  207 (422)
Q Consensus       162 ~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~-----~~~~d--------~  207 (422)
                      +++.+++        ++++|++..|+|+.+...+...+.             .+..++.+.     ++ .|        +
T Consensus       127 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~  205 (459)
T 4a6r_A          127 MIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAA  205 (459)
T ss_dssp             HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHH
Confidence            9998875        569999999999877655544322             233333211     12 45        7


Q ss_pred             HHHHHHhhc---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEE
Q 014594          208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV  277 (422)
Q Consensus       208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~  277 (422)
                      ++|++.+.+   +++++|+++.++|++|.+.+    .+++.++|+. |+++|+||+|.+|...+..  ....+...+++ 
T Consensus       206 ~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~-  284 (459)
T 4a6r_A          206 RWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLF-  284 (459)
T ss_dssp             HHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE-
T ss_pred             HHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCee-
Confidence            889888863   34566666666677777665    5666666765 9999999999988654422  22233333333 


Q ss_pred             EccChhhhccccccceeeecCHHHHHHHHH-----hcCCCCCcHHHHHHHHHHccC---ChHHH-HH-HHHHHHHHHHHH
Q 014594          278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWR-----AKQPYNVSVAAEVAACAALQN---PIYLE-VK-EALIKERERLFK  347 (422)
Q Consensus       278 ~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~-----~~~~~~~~~~~~~aa~~~L~~---~~~~~-~~-~~~~~~~~~l~~  347 (422)
                        +|||.++.+|+|+||+++++++++.+..     ...+|+.++++++++.++|+.   +++.+ .+ +.....++.|.+
T Consensus       285 --t~sK~l~gg~~~lg~v~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~  362 (459)
T 4a6r_A          285 --TAAKGLSSGYLPIGAVFVGKRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRE  362 (459)
T ss_dssp             --EECGGGGTTSSCCEEEEECHHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHH
T ss_pred             --ehhhhhcCCCCCccceeeCHHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence              6789987555999999999999998872     223578899999999999873   34444 44 555555666656


Q ss_pred             HHccCCCCcccCCCceEEEEEeCCCCC-----------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHH
Q 014594          348 LLKDVPFLNPYPSYSNFILCEVTSGMD-----------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDA  413 (422)
Q Consensus       348 ~L~~~~~~~~~p~~~~f~~~~~~~~~~-----------~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~  413 (422)
                      .|++++.+...+..|+|+++++.....           ..++.+.|+++||.+++++     +++||++.   +.+++++
T Consensus       363 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-----~~iRi~~~~~~t~e~i~~  437 (459)
T 4a6r_A          363 TFSRFEHVDDVRGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRACG-----DHIVSAPPLVMTRAEVDE  437 (459)
T ss_dssp             HHTTCTTEEEEEEETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEET-----TEEEECCCTTCCHHHHHH
T ss_pred             HHhcCCCeEEEEEEEEEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEecCC-----CEEEEECCCCCCHHHHHH
Confidence            666666555566778899998863211           6778899999999999874     89999943   4555555


Q ss_pred             HHHHHh
Q 014594          414 LMECLM  419 (422)
Q Consensus       414 l~~al~  419 (422)
                      +.++|+
T Consensus       438 ~l~~l~  443 (459)
T 4a6r_A          438 MLAVAE  443 (459)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            555444

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=99.97  E-value=6.9e-31  Score=253.73  Aligned_cols=305  Identities=10%  Similarity=0.025  Sum_probs=220.9

Q ss_pred             eEEcCCCCCCCCCCHHHHHHHhc-CCC-----------CCCCCCc--chHHHHHHHHHHcCCC-CCCEEEeCCH-HHHHH
Q 014594           97 IVKIDANENPYGPPPEVREALGQ-LKF-----------PYIYPDP--ESRRLRAALAKDSGLE-SDHILVGCGA-DELID  160 (422)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~-~~~-----------~~~y~~~--~~~~lr~~la~~~~~~-~~~i~~~~G~-~~al~  160 (422)
                      +++++.|.  .++++.+++++.+ +..           .++++..  ...++++++++++|++ +++|++|+|+ ++++.
T Consensus         4 ~~~~~~g~--~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~   81 (360)
T 1w23_A            4 VFNFNAGP--SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFT   81 (360)
T ss_dssp             CEECCSSS--CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHH
T ss_pred             eEeecCCC--cCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHHH
Confidence            46666554  4778999999876 321           0112221  2568999999999986 5699999999 99999


Q ss_pred             HHHHHhcCC---CCEEEEcCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHH-HhhcCCCeEEEEeCCCCccCcCC
Q 014594          161 LIMRCVLDP---GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIAD-AVEREKPKCIFLTSPNNPDGSII  235 (422)
Q Consensus       161 ~~~~~l~~~---gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~-~i~~~~~~~i~l~~p~NPtG~~~  235 (422)
                      .++.+++.+   ||.|+++.++|..+ ..++..| +++.++.+. ++.+|++++++ +++ +++|+|++++|+||||.++
T Consensus        82 ~~~~~l~~~~~~g~~vi~~~~~~~~~-~~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~-~~~k~v~~~~~~nptG~~~  158 (360)
T 1w23_A           82 MLPMNLLTKGTIGNYVLTGSWSEKAL-KEAKLLG-ETHIAASTKANSYQSIPDFSEFQLN-ENDAYLHITSNNTIYGTQY  158 (360)
T ss_dssp             HHHHHHCCTTCEEEEEECSHHHHHHH-HHHHTTS-EEEEEEECGGGTSCSCCCGGGCCCC-TTEEEEEEESEETTTTEEC
T ss_pred             HHHHHhcCCCCcccEEEecchhHHHH-HHHHHhC-CeEEeecccccCcCCccchHhhccC-CCCCEEEEeCCCCCcceec
Confidence            999988865   55677766666543 3456689 999999653 33589999998 885 7899999999999999999


Q ss_pred             CHHHHHHHHcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc------
Q 014594          236 NDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK------  309 (422)
Q Consensus       236 ~~e~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~------  309 (422)
                      +  ++.+  +.|+++|+||+|..+..... .   ...  .++++|+||.+|++|  +||+++++++++.+....      
T Consensus       159 ~--~i~~--~~~~~li~D~a~~~~~~~~~-~---~~~--di~~~s~sK~~~~~G--~G~~~~~~~~~~~~~~~~~~~~~~  226 (360)
T 1w23_A          159 Q--NFPE--INHAPLIADMSSDILSRPLK-V---NQF--GMIYAGAQKNLGPSG--VTVVIVKKDLLNTKVEQVPTMLQY  226 (360)
T ss_dssp             S--SCCC--CCSSCEEEECTTTTTSSCCC-G---GGC--SEEEEETTTTTSCTT--CEEEEEEHHHHCSCCTTCCGGGCH
T ss_pred             c--cccc--cCCceEEEechhhcCCCCcC-c---ccC--CEEEEEcccccCCCC--cEEEEEcHHHHhhcccCCcchhhh
Confidence            8  3333  34999999999987653211 1   122  278999999998666  899999998876554321      


Q ss_pred             -------C-CCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCC-ccc--CC--CceEEEEEeCCC
Q 014594          310 -------Q-PYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFL-NPY--PS--YSNFILCEVTSG  372 (422)
Q Consensus       310 -------~-~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~-~~~--p~--~~~f~~~~~~~~  372 (422)
                             . ..+.+...+.++.++++.   .++++ ++++++++++++.+.|++++.+ ...  ++  .+.++|+++++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (360)
T 1w23_A          227 ATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNE  306 (360)
T ss_dssp             HHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSH
T ss_pred             hhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCCC
Confidence                   1 124566666666666653   22566 8899999999999999988743 322  32  244899999754


Q ss_pred             CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          373 MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       373 ~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      .+..++.+.|.++||.++++..  .++++||+++   +.++++++.++|++
T Consensus       307 ~~~~~~~~~l~~~gi~~~~~~~--~~~~iRis~~~~~~~~~i~~~~~~l~~  355 (360)
T 1w23_A          307 ELNQQFLAKAKEQGFVGLNGHR--SVGGCRASIYNAVPIDACIALRELMIQ  355 (360)
T ss_dssp             HHHHHHHHHHHHTTEESCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHCCeeeecCCC--CCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence            4567888888899999987653  3689999997   55666777776664

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=99.97  E-value=7.1e-30  Score=251.61  Aligned_cols=305  Identities=13%  Similarity=0.093  Sum_probs=225.3

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCC--------C--cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQ-LKFPYIYP--------D--PESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~--------~--~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      .+.++|+.+.+. ++++.+.+++.+ +.....++        .  ....++++++++++|+++++|++|+|+++++..++
T Consensus        27 ~~~~yld~~~~~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al  105 (416)
T 1qz9_A           27 EGVIYLDGNSLG-ARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLFKVL  105 (416)
T ss_dssp             TTCEECCTTTSC-CCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHH
T ss_pred             CCeEeecCCCcC-CCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHH
Confidence            356899988876 567778888765 22211111        1  23578999999999998899999999999999888


Q ss_pred             HHhc------CCCCE-EEEcCCCchhHHHH----HHHc--CCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCc
Q 014594          164 RCVL------DPGDK-IVDCPPTFTMYEFD----AAVN--GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNP  230 (422)
Q Consensus       164 ~~l~------~~gd~-Vl~~~p~y~~~~~~----~~~~--g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NP  230 (422)
                      ++++      ++||+ |++..++|+.+...    ++..  |++++.++.       ++++++.++ +++++|++++|+||
T Consensus       106 ~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~~~l~~~i~-~~~~~v~~~~~~np  177 (416)
T 1qz9_A          106 SAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS-------PEELPQAID-QDTAVVMLTHVNYK  177 (416)
T ss_dssp             HHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS-------GGGHHHHCS-TTEEEEEEESBCTT
T ss_pred             HhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc-------HHHHHHHhC-CCceEEEEeccccC
Confidence            8776      89987 55556688754432    3334  999999985       788999987 68999999999999


Q ss_pred             cCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccc-eeeecCHHHHHHHHHh
Q 014594          231 DGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRV-GYGAFPLSIIEYLWRA  308 (422)
Q Consensus       231 tG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~-G~i~~~~~~~~~l~~~  308 (422)
                      ||.+++.+++.++++. |+++|+||+|..... +....   ..+.++++.|++|.++ +|.++ ||+++++++++.+...
T Consensus       178 tG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~-~~~~~---~~~~d~~~~s~~K~l~-~g~~~~g~l~~~~~~~~~l~~~  252 (416)
T 1qz9_A          178 TGYMHDMQALTALSHECGALAIWDLAHSAGAV-PVDLH---QAGADYAIGCTYKYLN-GGPGSQAFVWVSPQLCDLVPQP  252 (416)
T ss_dssp             TCBBCCHHHHHHHHHHHTCEEEEECTTTTTTS-CCCHH---HHTCSEEEECSSSTTC-CCTTCCCEEEECTTTTTTSCCS
T ss_pred             cccccCHHHHHHHHHHcCCEEEEEccccccCc-CCChh---hcCCCEEEecCcccCC-CCCCCeEEEEECHHHHhccCCC
Confidence            9999999999999987 999999999984221 11111   1234588899999864 67888 9999998877655431


Q ss_pred             -------------------------cCCCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccC-C--CCcc
Q 014594          309 -------------------------KQPYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDV-P--FLNP  357 (422)
Q Consensus       309 -------------------------~~~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~-~--~~~~  357 (422)
                                               ...++.+...+.++.++|+.  .++++ .+++++++++++.+.|+++ +  .+.+
T Consensus       253 ~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~  332 (416)
T 1qz9_A          253 LSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTL  332 (416)
T ss_dssp             CCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEE
T ss_pred             ccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEE
Confidence                                     11235677777766666653  23555 8889999999999999875 3  3443


Q ss_pred             cCC-----CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014594          358 YPS-----YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG----KPEHTDALMECLMH  420 (422)
Q Consensus       358 ~p~-----~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~----~~~~~~~l~~al~~  420 (422)
                      .++     .++++|++++   +..++.+.|.++||.+...    .++++||+++    +.++++++.++|++
T Consensus       333 ~~~~~~~~~~~~~~~~~~---~~~~l~~~l~~~gi~~~~~----~~~~lRis~~~~~~t~~~i~~~~~~l~~  397 (416)
T 1qz9_A          333 VTPREHAKRGSHVSFEHP---EGYAVIQALIDRGVIGDYR----EPRIMRFGFTPLYTTFTEVWDAVQILGE  397 (416)
T ss_dssp             CSCSSGGGBCSEEEEECT---THHHHHHHHHTTTEECEEE----TTTEEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             eCCCCHHHcCCEEEEecC---CHHHHHHHHHhCCcEeccC----CCCeEEEeCcccCCCHHHHHHHHHHHHH
Confidence            332     3678899986   3788999999999998653    2589999987    56666666666654

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=99.97  E-value=1.9e-29  Score=247.49  Aligned_cols=280  Identities=16%  Similarity=0.153  Sum_probs=208.5

Q ss_pred             CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEecCCCC
Q 014594          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSD  202 (422)
Q Consensus       127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~  202 (422)
                      +++...++++++++++|.+  +.++++++++++..++++++++||+|+++.|+|+.+...+    +..|++++.++.+  
T Consensus        62 ~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--  137 (398)
T 2rfv_A           62 GNPTTDALEKKLAVLERGE--AGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA--  137 (398)
T ss_dssp             CCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT--
T ss_pred             CChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC--
Confidence            4556789999999999975  5566666779999999999999999999999999877665    7789999999853  


Q ss_pred             CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccC
Q 014594          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (422)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~  281 (422)
                         |++++++.++ +++++|++++|+||||.+++.+++.++++. |+++|+||+|..+.... ..    ..+.++++.|+
T Consensus       138 ---d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~-~~----~~~~di~~~s~  208 (398)
T 2rfv_A          138 ---KPEEIRAAMR-PETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQ-PL----QLGADIVVHSV  208 (398)
T ss_dssp             ---SHHHHHHHCC-TTEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTCC-GG----GGTCSEEEEET
T ss_pred             ---CHHHHHHhcC-CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCC-ch----hhCCcEEEEeC
Confidence               8999999997 689999999999999999999999999987 99999999999766432 11    23467999999


Q ss_pred             hhhhccccccc-eeeecCHHHHH-HHHHhcC---CCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCC--
Q 014594          282 SKRAGLAGLRV-GYGAFPLSIIE-YLWRAKQ---PYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPF--  354 (422)
Q Consensus       282 SK~~~~~G~r~-G~i~~~~~~~~-~l~~~~~---~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~--  354 (422)
                      ||.++.+|+|+ ||+++++++++ .+.....   .++.+++.+.++.++|+..  ....+++.++.+.+.+.|++.+.  
T Consensus       209 sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~~~~v~  286 (398)
T 2rfv_A          209 TKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKTL--GIRMERHCENALKIARFLEGHPSIT  286 (398)
T ss_dssp             TTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTTH--HHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred             cccccCCCCceEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhhH--HHHHHHHHHHHHHHHHHHHcCCCee
Confidence            99998899998 99999998887 5553332   3578889999999888652  12445566677777777766431  


Q ss_pred             ------------Cccc----CCCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCCC----------------------
Q 014594          355 ------------LNPY----PSYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNNK----------------------  395 (422)
Q Consensus       355 ------------~~~~----p~~~~f~~~~~~~~-~~~~~~~~~L~~~gI~v~~~~~~----------------------  395 (422)
                                  +.+.    ...++++++++++. .+...+.+.+...|+.+++|..+                      
T Consensus       287 ~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~  366 (398)
T 2rfv_A          287 RVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKA  366 (398)
T ss_dssp             EEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHT
T ss_pred             EEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCHHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhc
Confidence                        1111    13577888898631 12223333333346766666321                      


Q ss_pred             C-CCCeEEEEecC---hhhHHHHHHHHhhh
Q 014594          396 E-LKGYVRVSVGK---PEHTDALMECLMHL  421 (422)
Q Consensus       396 ~-~~~~iRis~~~---~~~~~~l~~al~~l  421 (422)
                      + .++++|||++.   .+++++|.++++++
T Consensus       367 g~~~~~iRls~~~~~~~~~i~~l~~al~~~  396 (398)
T 2rfv_A          367 GITDGLIRLSVGLEDPEDIINDLEHAIRKA  396 (398)
T ss_dssp             TCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence            1 16899999985   44456666666543

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=99.97  E-value=4.2e-30  Score=256.20  Aligned_cols=310  Identities=16%  Similarity=0.160  Sum_probs=220.6

Q ss_pred             CCeEEcCCC-CCCCCCCHHHHHHHhcC-----CC-CCCC---CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594           95 EDIVKIDAN-ENPYGPPPEVREALGQL-----KF-PYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (422)
Q Consensus        95 ~~~i~l~~~-~~~~~~~~~v~~al~~~-----~~-~~~y---~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~  164 (422)
                      .++|.++.+ ++.++.++.+.++....     .. .+.|   +++...++++.+++++|.+  ++++++|+++++..++.
T Consensus        89 ~~~i~l~~g~~~~~~~~~~i~~a~~~~~~~~~~~~~~~Y~~~g~~~~~~l~~~la~~~g~~--~~i~~~sGt~al~~~l~  166 (464)
T 1ibj_A           89 TLLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKAD--RAFCFTSGMAALSAVTH  166 (464)
T ss_dssp             HHHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBTTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHT
T ss_pred             CeEEECCCCCCCCCCCCccHHhhhhhhhhcccccCCccccCCCCHHHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHH
Confidence            346788876 66677777776665531     11 2345   3344567899999999864  77778888999998886


Q ss_pred             HhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHH
Q 014594          165 CVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL  240 (422)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l  240 (422)
                       ++++||+|+++.|+|+.+...    ++..|++++.++.+     |+++++++++ +++++|++++|+||||.+++.+++
T Consensus       167 -~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~i~-~~tk~v~l~~p~NptG~v~~l~~i  239 (464)
T 1ibj_A          167 -LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-----KLDEVAAAIG-PQTKLVWLESPTNPRQQISDIRKI  239 (464)
T ss_dssp             -TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-----SHHHHHHHCC-SSEEEEEECSSCTTTCCCCCHHHH
T ss_pred             -HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHHhc-cCceEEEEeCCCCCCCEeecHHHH
Confidence             889999999999999988653    45689999999853     8999999997 789999999999999999999999


Q ss_pred             HHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcc-ccccceeeecC-HHHHHHHHHhc--CCCCCc
Q 014594          241 LKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL-AGLRVGYGAFP-LSIIEYLWRAK--QPYNVS  315 (422)
Q Consensus       241 ~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~r~G~i~~~-~~~~~~l~~~~--~~~~~~  315 (422)
                      .++|+. |+++|+||+|...... ...    ..++++++.|+||.++. +|+|+||++++ +++++.+....  ..++.+
T Consensus       240 ~~la~~~gi~livDea~~~g~~~-~~~----~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~~  314 (464)
T 1ibj_A          240 SEMAHAQGALVLVDNSIMSPVLS-RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLA  314 (464)
T ss_dssp             HHHHHTTTCEEEEECTTTCTTTC-CGG----GTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCC
T ss_pred             HHHHHHcCCEEEEECCCcccccC-Chh----hcCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCCC
Confidence            999987 9999999999853211 111    24678999999998864 48999999998 47888887655  346678


Q ss_pred             HHHHHHHHHHccCCh-HHH-HHHHHHHHHHHHH----------HHHccCCCCcccCC----CceEEEEEeCCCCC-HHHH
Q 014594          316 VAAEVAACAALQNPI-YLE-VKEALIKERERLF----------KLLKDVPFLNPYPS----YSNFILCEVTSGMD-AKKL  378 (422)
Q Consensus       316 ~~~~~aa~~~L~~~~-~~~-~~~~~~~~~~~l~----------~~L~~~~~~~~~p~----~~~f~~~~~~~~~~-~~~~  378 (422)
                      ++.+.++.++|+... ..+ ..+......+++.          +.|++++.+.+.++    .+++++++++ +.+ .+.+
T Consensus       315 ~~~~~a~~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~-~~~~~~~~  393 (464)
T 1ibj_A          315 PFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG-SVALSKHL  393 (464)
T ss_dssp             HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECS-CHHHHHHH
T ss_pred             HHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEEC-CHHHHHHH
Confidence            888988888887532 122 2222222222222          12233333332222    3678999985 322 3457


Q ss_pred             HHHHHhCCcEEEeCC------------C----------CC-CCCeEEEEecChhhHHHHHHHHhh
Q 014594          379 KDDLAKMGVMIRHYN------------N----------KE-LKGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       379 ~~~L~~~gI~v~~~~------------~----------~~-~~~~iRis~~~~~~~~~l~~al~~  420 (422)
                      .+.|...||.++.|.            .          .+ .++++||+++. ++++++.+.|++
T Consensus       394 ~~~L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~-edi~~li~~L~~  457 (464)
T 1ibj_A          394 VETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI-EDVDDLISDLDI  457 (464)
T ss_dssp             HHHCSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS-SCHHHHHHHHHH
T ss_pred             HHhcCcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC-CCHHHHHHHHHH
Confidence            777777888887764            1          01 25799999998 667777777664

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=99.97  E-value=1.6e-29  Score=251.01  Aligned_cols=314  Identities=13%  Similarity=0.057  Sum_probs=228.4

Q ss_pred             CCCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      ..+++.++|+..|.  ++++ .+|++.+++.+ +...    ..|+.+...++++.++++++  .++|++++|++++++.+
T Consensus        72 d~~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~sGseA~~~a  149 (439)
T 2oat_A           72 DVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLFN--YHKVLPMNTGVEAGETA  149 (439)
T ss_dssp             ETTCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEESSHHHHHHHHHHHHT--CSEEEEESSHHHHHHHH
T ss_pred             ECCCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHHhcC--CCEEEEeCCHHHHHHHH
Confidence            34567899998874  4566 88999999876 3221    22444457899999999997  57999999999999999


Q ss_pred             HHHhc---------CCC-CEEEEcCCCchhHHH-HHHHcC------------CEEEEecCCCCCCCCHHHHHHHhhcCCC
Q 014594          163 MRCVL---------DPG-DKIVDCPPTFTMYEF-DAAVNG------------AAVVKVPRKSDFSLNVELIADAVEREKP  219 (422)
Q Consensus       163 ~~~l~---------~~g-d~Vl~~~p~y~~~~~-~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~  219 (422)
                      ++.+.         .+| |+|++.+|+|+.+.. .....|            ..++.+|.     .|++++++.++.+++
T Consensus       150 l~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-----~d~~~le~~l~~~~~  224 (439)
T 2oat_A          150 CKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-----NDLPALERALQDPNV  224 (439)
T ss_dssp             HHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-----SCHHHHHHHTTSTTE
T ss_pred             HHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-----CCHHHHHHHhCCCCE
Confidence            99764         357 899999999976533 333334            45666663     389999999953577


Q ss_pred             eEEEEeCCCCccCcCC----CHHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhcccc-cc
Q 014594          220 KCIFLTSPNNPDGSII----NDEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG-LR  291 (422)
Q Consensus       220 ~~i~l~~p~NPtG~~~----~~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G-~r  291 (422)
                      ++|+++..+|++|.+.    ..+++.++|+. |+++|+||+|.+|...+..  ....+...+++   ||||.++ +| +|
T Consensus       225 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~---t~sK~l~-~G~~~  300 (439)
T 2oat_A          225 AAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIV---LLGKALS-GGLYP  300 (439)
T ss_dssp             EEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG-TTSSC
T ss_pred             EEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCcEE---Eeccccc-CCCCC
Confidence            8887766667899765    46666666665 9999999999877643322  12222223333   8999998 68 99


Q ss_pred             ceeeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCc--ccCCCceEEEE
Q 014594          292 VGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLN--PYPSYSNFILC  367 (422)
Q Consensus       292 ~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~f~~~  367 (422)
                      +||+++++++++.+...  ...|+.|++++.++.++|+..+..+..++++++++++.+.|++++...  ..++.|+|+++
T Consensus       301 ~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~g~~~~v  380 (439)
T 2oat_A          301 VSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLPSDVVTAVRGKGLLNAI  380 (439)
T ss_dssp             CEEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTSCTTTEEEEEEETTEEEE
T ss_pred             eEEEEECHHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeEEEE
Confidence            99999999988776542  334778999999888888642211267788899999999998874221  23467889999


Q ss_pred             EeCCC--CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          368 EVTSG--MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       368 ~~~~~--~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      ++++.  .+..++.+.|.++||.+.++.    ++++||+++   +.++++++.++|+
T Consensus       381 ~l~~~~~~~~~~l~~~l~~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~  433 (439)
T 2oat_A          381 VIKETKDWDAWKVCLRLRDNGLLAKPTH----GDIIRFAPPLVIKEDELRESIEIIN  433 (439)
T ss_dssp             EECCCSSCCHHHHHHHHHHTTEECCBSS----SSEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             EEecCccHHHHHHHHHHHHCCeEEecCC----CCEEEEECccCCCHHHHHHHHHHHH
Confidence            99754  468899999999999999853    589999875   3445555555544

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=99.97  E-value=4.6e-30  Score=255.81  Aligned_cols=318  Identities=16%  Similarity=0.140  Sum_probs=224.3

Q ss_pred             CCCCeEEcCCCC--CCCCC-CHHHHHHHhc-CCCC----C-CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           93 KPEDIVKIDANE--NPYGP-PPEVREALGQ-LKFP----Y-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        93 ~~~~~i~l~~~~--~~~~~-~~~v~~al~~-~~~~----~-~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      .+..++|+..+.  ++++. +|++.+++.+ +...    . .|+.+...++++.++++++.++++|++|+|++++++.++
T Consensus        48 ~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~al  127 (449)
T 3a8u_X           48 KGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLDYSPGFQYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTAV  127 (449)
T ss_dssp             TCCEEEETTHHHHTCTTCBSCHHHHHHHHHHTTTCSCCCSSSCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHHH
T ss_pred             CCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHH
Confidence            456788987664  45543 7999999876 3321    1 455555678999999999877889999999999999999


Q ss_pred             HHhcC--------CCCEEEEcCCCchhHHH-HHHHcCC------------EEEEecCCCCC-----CCC--------HHH
Q 014594          164 RCVLD--------PGDKIVDCPPTFTMYEF-DAAVNGA------------AVVKVPRKSDF-----SLN--------VEL  209 (422)
Q Consensus       164 ~~l~~--------~gd~Vl~~~p~y~~~~~-~~~~~g~------------~~~~v~~~~~~-----~~d--------~~~  209 (422)
                      +.+..        ++|+|++.+|+|+.+.. .....|.            .+..++.+..+     ++|        +++
T Consensus       128 ~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~  207 (449)
T 3a8u_X          128 KMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADE  207 (449)
T ss_dssp             HHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHH
Confidence            97764        67999999999986533 3333331            23444422211     256        999


Q ss_pred             HHHHhhc---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCc--hhhhhhcCCcEEEEc
Q 014594          210 IADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLR  279 (422)
Q Consensus       210 l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~~~  279 (422)
                      |++.+++   +++++|+++..+|+||.+.+    .+++.++|+. |+++|+||+|.+|...+.  .........+++   
T Consensus       208 le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~---  284 (449)
T 3a8u_X          208 LLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLM---  284 (449)
T ss_dssp             HHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE---
T ss_pred             HHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEE---
Confidence            9999864   35666665555578998887    7888888877 999999999987764332  223333233433   


Q ss_pred             cChhhhcccc-ccceeeecCHHHHHHHHHh-----------cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHH
Q 014594          280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWRA-----------KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFK  347 (422)
Q Consensus       280 S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~-----------~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~  347 (422)
                      ||||.++ +| +|+||+++++++++.+...           ...++.+++++.++.++|+..+..+..++++++++++.+
T Consensus       285 s~sK~l~-~G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~  363 (449)
T 3a8u_X          285 CIAKQVT-NGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEK  363 (449)
T ss_dssp             EECGGGG-TTSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred             EEccccc-CCCCceEEEEECHHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            8899998 57 9999999999999888753           124677899998888888642111166777888888888


Q ss_pred             HHccCCCC---cccCCCceEEEEEeCCCC-----CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHH
Q 014594          348 LLKDVPFL---NPYPSYSNFILCEVTSGM-----DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALME  416 (422)
Q Consensus       348 ~L~~~~~~---~~~p~~~~f~~~~~~~~~-----~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~  416 (422)
                      .|++++..   ...++.++|+|+++++..     +..++.+.|.++||.++++.     +++||++.   +.++++++.+
T Consensus       364 ~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-----~~iRis~~~~~t~~~i~~~l~  438 (449)
T 3a8u_X          364 ALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFGG-----DTLQFGPTFNSKPQDLDRLFD  438 (449)
T ss_dssp             HHHTTTTSTTEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEET-----TEEEECCCTTCCHHHHHHHHH
T ss_pred             HHHHHhcCCCeEEEeeeEEEEEEEEecCcccccccHHHHHHHHHHCCcEEecCC-----CEEEEECCCcCCHHHHHHHHH
Confidence            88775322   223457889999997432     23378899998999999873     89999954   4555555555


Q ss_pred             HHh
Q 014594          417 CLM  419 (422)
Q Consensus       417 al~  419 (422)
                      +|+
T Consensus       439 ~l~  441 (449)
T 3a8u_X          439 AVG  441 (449)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=99.97  E-value=5.9e-29  Score=248.22  Aligned_cols=314  Identities=13%  Similarity=0.106  Sum_probs=218.7

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEE
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI  173 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~V  173 (422)
                      ..++|+..+.++.+.++.+.+++....  ..| +.++..+||++++++++.  +++++++|+++++..++++++++||  
T Consensus        42 ~~ylD~~~~~~~~~~~~~~~~a~~~~~--~~y~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~al~~l~~~gd--  115 (456)
T 2ez2_A           42 DIYIDLLTDSGTNAMSDKQWAGMMMGD--EAYAGSENFYHLERTVQELFGF--KHIVPTHQGRGAENLLSQLAIKPGQ--  115 (456)
T ss_dssp             GCSEECSCSSSCCCCCHHHHHHHTTCC--CCSSSCHHHHHHHHHHHHHHCC--SEEEEESSHHHHHHHHHHHHCCTTC--
T ss_pred             cceeeeccccCCccCCHHHHHHhhcch--hhcccChhHHHHHHHHHHHhCC--CcEEEeCCcHHHHHHHHHHhCCCCC--
Confidence            456899888888887898988887422  345 556789999999999986  4899999999999999999999999  


Q ss_pred             EEcCCCc-hhHHHHHHHcCCEEEEecCCC----------CCCCCHHHHHHHhhcCCC----eEEEEeCCCC-ccCcCCCH
Q 014594          174 VDCPPTF-TMYEFDAAVNGAAVVKVPRKS----------DFSLNVELIADAVEREKP----KCIFLTSPNN-PDGSIIND  237 (422)
Q Consensus       174 l~~~p~y-~~~~~~~~~~g~~~~~v~~~~----------~~~~d~~~l~~~i~~~~~----~~i~l~~p~N-PtG~~~~~  237 (422)
                      +++.|+| ..+...+...|++++.++.+.          ++.+|+++|++++++ ++    ++|++++|+| |||.+++.
T Consensus       116 i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~-~t~~~~~~v~l~~p~n~ptG~~~~~  194 (456)
T 2ez2_A          116 YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDE-KGAENIAYICLAVTVNLAGGQPVSM  194 (456)
T ss_dssp             EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHH-HCGGGEEEEEEESSBTTTTSBCCCH
T ss_pred             EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHh-ccccceeEEEEeccCCCCCCccCCH
Confidence            7888999 787888888999999998642          368899999999973 34    8999999999 99999996


Q ss_pred             HHHHHHH---cC-CCeEEEccCCcc----------ccCCCchhh----hhhcCCcEEEEccChhhhccccccceeeec-C
Q 014594          238 EDLLKIL---EM-PILVVLDEAYTE----------FSGLESRME----WVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-P  298 (422)
Q Consensus       238 e~l~~i~---~~-~~~li~Deay~~----------~~~~~~~~~----~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~-~  298 (422)
                      +++++|+   +. |+++|+||+|..          +.+.+....    ......+++++ |++|.. .+| |+||+++ +
T Consensus       195 ~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~-S~kk~~-~~~-~gG~~~~~~  271 (456)
T 2ez2_A          195 ANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTM-SGKKDC-LVN-IGGFLCMND  271 (456)
T ss_dssp             HHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEE-ETTTTT-CCS-SCEEEEESC
T ss_pred             HHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEE-eCcccC-CCC-ceeEEEECC
Confidence            5555554   43 999999999986          233332211    12233455555 778854 467 7899998 7


Q ss_pred             HHHHHHHHHhcC-------CCCCcHHHHHH-HHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeC
Q 014594          299 LSIIEYLWRAKQ-------PYNVSVAAEVA-ACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT  370 (422)
Q Consensus       299 ~~~~~~l~~~~~-------~~~~~~~~~~a-a~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~  370 (422)
                      +++++.+.....       ..+.+.....+ +.+.++.-+ .+..++.+++.+++.+.|++.+...+.|.+++|+|++++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~~~~~~~~~~  350 (456)
T 2ez2_A          272 DEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ-YEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDAR  350 (456)
T ss_dssp             HHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEEHH
T ss_pred             HHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHhcCCCccccCCCceEEEEEhH
Confidence            888887764332       12233333333 333332111 124445566677888888776533345778899999873


Q ss_pred             ---CCCCHHHH-----HHHH-HhCCcEEEeCCC-------------CCCCCeEEEEec----ChhhHHHHHHHHh
Q 014594          371 ---SGMDAKKL-----KDDL-AKMGVMIRHYNN-------------KELKGYVRVSVG----KPEHTDALMECLM  419 (422)
Q Consensus       371 ---~~~~~~~~-----~~~L-~~~gI~v~~~~~-------------~~~~~~iRis~~----~~~~~~~l~~al~  419 (422)
                         .+.+.+++     .+.| .++||.+.+.+.             ....+++||+++    +.++++++.++|+
T Consensus       351 ~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~  425 (456)
T 2ez2_A          351 RFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGII  425 (456)
T ss_dssp             HHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             HhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHH
Confidence               24444555     7777 588998765221             122479999987    3444555555444

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=99.97  E-value=3.5e-30  Score=250.54  Aligned_cols=304  Identities=13%  Similarity=0.086  Sum_probs=211.2

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHcCC-CCCCEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 014594           96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGL-ESDHILVGCGADELIDLIMRCVLDPGDKIV  174 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~la~~~~~-~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl  174 (422)
                      +++++..++++.++++++++++..    +..|..-...+++.+++++|. +++++++++|+++++..+++++  +||+|+
T Consensus        29 ~v~~~~~~~~~~~~~~~v~~a~~~----~~~~~~~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~--~gd~Vl  102 (374)
T 2aeu_A           29 ALYDLSGLSGGFLIDEKDKALLNT----YIGSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL--KPKKVI  102 (374)
T ss_dssp             GCEECSSCCCCCCCCHHHHHHHTS----TTHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH--CCSEEE
T ss_pred             ceeeecccCCCCCCCHHHHHHHHH----hcCchHHHHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC--CCCEEE
Confidence            689999999899999999999972    111211234677777778887 3478999999999999999977  999999


Q ss_pred             EcCCCchhHH---HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeE-EEEeCCCCccC-cCCCHHHHHHHHcC-CC
Q 014594          175 DCPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKC-IFLTSPNNPDG-SIINDEDLLKILEM-PI  248 (422)
Q Consensus       175 ~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~-i~l~~p~NPtG-~~~~~e~l~~i~~~-~~  248 (422)
                      ++.|+|+.+.   ..++..|++++.+       .|++++++. + +++++ |++++|||||| ...+.+++.++++. |+
T Consensus       103 ~~~~~y~~~~~~~~~~~~~g~~~~~v-------~d~~~l~~~-~-~~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~  173 (374)
T 2aeu_A          103 HYLPELPGHPSIERSCKIVNAKYFES-------DKVGEILNK-I-DKDTLVIITGSTMDLKVIELENFKKVINTAKNKEA  173 (374)
T ss_dssp             EECSSSSCCTHHHHHHHHTTCEEEEE-------SCHHHHHTT-C-CTTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTC
T ss_pred             EecCCCCccHHHHHHHHHcCcEEEEe-------CCHHHHHhc-C-CCccEEEEEccCCCCCCCCcccHHHHHHHHHHcCC
Confidence            9999775422   2567789999888       389999988 5 78999 99999999999 66666777777766 99


Q ss_pred             eEEEccCCccccC---CC-chhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCC--CCcHHHHHHH
Q 014594          249 LVVLDEAYTEFSG---LE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY--NVSVAAEVAA  322 (422)
Q Consensus       249 ~li~Deay~~~~~---~~-~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~--~~~~~~~~aa  322 (422)
                      ++|+||+|..+..   .. +...    .+.+++++|+||.  ++|+|+||+++++++++.+......+  +++++.+.++
T Consensus       174 ~li~De~~~~~~~~~~~~~~~~~----~~~di~~~S~sK~--l~g~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~  247 (374)
T 2aeu_A          174 IVFVDDASGARVRLLFNQPPALK----LGADLVVTSTDKL--MEGPRGGLLAGKKELVDKIYIEGTKFGLEAQPPLLAGI  247 (374)
T ss_dssp             CEEEECTTHHHHHHHTTCCCHHH----HTCSEEEEETTSS--SSSCSCEEEEEEHHHHHHHHHHHHTTTCBCCHHHHHHH
T ss_pred             EEEEECCcccccccccccCCccc----cCCcEEEecCccc--ccCcceEEEEECHHHHHHHHHhhccccCCCCHHHHHHH
Confidence            9999999987641   11 1111    2345889999997  46789999999999999887765443  5688888888


Q ss_pred             HHHccCChH--HH-HHHHHHHH----HHHHHHHHccC---CCCcc-cCCCceE-EEEEeCCCCC---HHHHHHHH-HhCC
Q 014594          323 CAALQNPIY--LE-VKEALIKE----RERLFKLLKDV---PFLNP-YPSYSNF-ILCEVTSGMD---AKKLKDDL-AKMG  386 (422)
Q Consensus       323 ~~~L~~~~~--~~-~~~~~~~~----~~~l~~~L~~~---~~~~~-~p~~~~f-~~~~~~~~~~---~~~~~~~L-~~~g  386 (422)
                      .++|+....  .+ ..+..+..    ++.+.+.|..+   ..+.+ .+..+.| .|.+.+...+   ..+++..+ .++|
T Consensus       248 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ll~~~g  327 (374)
T 2aeu_A          248 YRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTINIKKLIEIGFNLLKNYG  327 (374)
T ss_dssp             HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEeecccccccccchHHHHHHHHHhCC
Confidence            888875321  22 22222222    46666666654   12232 2233333 3444431111   12255454 4789


Q ss_pred             cEEEeCCC-CCCCCeEEEEecChh----hHHHHHHHHhh
Q 014594          387 VMIRHYNN-KELKGYVRVSVGKPE----HTDALMECLMH  420 (422)
Q Consensus       387 I~v~~~~~-~~~~~~iRis~~~~~----~~~~l~~al~~  420 (422)
                      |.++++.. +..++++||+++...    +++++.++++.
T Consensus       328 V~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~  366 (374)
T 2aeu_A          328 IITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVE  366 (374)
T ss_dssp             EECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHH
T ss_pred             EEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHH
Confidence            99999865 345679999998532    25566666543

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.97  E-value=1.5e-28  Score=240.13  Aligned_cols=280  Identities=18%  Similarity=0.175  Sum_probs=215.4

Q ss_pred             CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEecC
Q 014594          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPR  199 (422)
Q Consensus       124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~  199 (422)
                      .+|++++..+++++++++++.+ +.|++++| ++++..+++.++++||+|+++.|+|+....    .++..|++++.++.
T Consensus        47 ~~~~~~~~~~l~~~la~~~~~~-~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  124 (386)
T 1cs1_A           47 SRRGNPTRDVVQRALAELEGGA-GAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQ  124 (386)
T ss_dssp             TTTCCHHHHHHHHHHHHHHTCS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECT
T ss_pred             eCCCCccHHHHHHHHHHHhCCC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCC
Confidence            4567778899999999999976 66777665 899999999999999999999999986333    23567999999985


Q ss_pred             CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (422)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~  278 (422)
                      +     |++.+++.++ +++++|++++|+||||.+++.+++.++++. |+++|+||+|..+..... .    ..+.++++
T Consensus       125 ~-----d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~-~----~~~~di~~  193 (386)
T 1cs1_A          125 G-----DEQALRAALA-EKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNP-L----ALGADLVL  193 (386)
T ss_dssp             T-----CHHHHHHHHH-TCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCG-G----GGTCSEEE
T ss_pred             C-----CHHHHHHhhc-cCCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCc-c----ccCceEEE
Confidence            2     8999999997 689999999999999999999999999987 999999999998765321 1    23567999


Q ss_pred             ccChhhhccccccc-eeeecCH-HHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594          279 RTFSKRAGLAGLRV-GYGAFPL-SIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP  353 (422)
Q Consensus       279 ~S~SK~~~~~G~r~-G~i~~~~-~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~  353 (422)
                      .|+||.++.+|.|+ ||+++++ ++++.+......  ++.+++.+.++...++   ++. ..+.+.++++.+.+.|++++
T Consensus       194 ~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~~  270 (386)
T 1cs1_A          194 HSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLR---TLVPRMELAQRNAQAIVKYLQTQP  270 (386)
T ss_dssp             EETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHTTCT
T ss_pred             EcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999899887 9999986 788887765443  4467787777766664   344 66777888888888888765


Q ss_pred             CCc-c-cC----------------CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC--------------------
Q 014594          354 FLN-P-YP----------------SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK--------------------  395 (422)
Q Consensus       354 ~~~-~-~p----------------~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~--------------------  395 (422)
                      .+. . .+                ..++++.+.+++  +.+.+.+.|.++||.++.....                    
T Consensus       271 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~~~~~~~~~~  348 (386)
T 1cs1_A          271 LVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG--DEQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPE  348 (386)
T ss_dssp             TEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS--CHHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGTTTTTSCHH
T ss_pred             CeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC--CHHHHHHHHHhCCcceEcccCCCcceeeecccccccccCCHH
Confidence            432 1 11                237788888863  3677888888999999842110                    


Q ss_pred             ------CCCCeEEEEecC---hhhHHHHHHHHhhh
Q 014594          396 ------ELKGYVRVSVGK---PEHTDALMECLMHL  421 (422)
Q Consensus       396 ------~~~~~iRis~~~---~~~~~~l~~al~~l  421 (422)
                            ..++++||+++.   .++++.|.++++.+
T Consensus       349 ~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~  383 (386)
T 1cs1_A          349 ARAAAGISETLLRISTGIEDGEDLIADLENGFRAA  383 (386)
T ss_dssp             HHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence                  125899999986   33445555555543

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=99.97  E-value=1.1e-29  Score=253.36  Aligned_cols=319  Identities=13%  Similarity=0.146  Sum_probs=229.5

Q ss_pred             CCC--CeEEcCCC--CCCCC-CCHHHHHHHhc-C---CCC--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           93 KPE--DIVKIDAN--ENPYG-PPPEVREALGQ-L---KFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        93 ~~~--~~i~l~~~--~~~~~-~~~~v~~al~~-~---~~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      +++  ++||+.+|  .+.++ .+|++.+++.+ +   .+.  ..|+.+...+|+++++++++...++|++++|++++++.
T Consensus        71 dG~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~  150 (457)
T 3tfu_A           71 DGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEV  150 (457)
T ss_dssp             TTEEEEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHH
T ss_pred             CCCeeEEEECCCcHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHH
Confidence            667  89999887  56665 68899888865 2   221  23455567899999999998777899999999999999


Q ss_pred             HHHHhcC-------CC-CEEEEcCCCchhHHHHHHHcCC--------------EEEEecC--CCCCCCCHHHHHHHhhc-
Q 014594          162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAVNGA--------------AVVKVPR--KSDFSLNVELIADAVER-  216 (422)
Q Consensus       162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~--------------~~~~v~~--~~~~~~d~~~l~~~i~~-  216 (422)
                      +++.+..       +| +.|++..++|+.+...+...+.              .+..++.  ......|+++|++.+++ 
T Consensus       151 Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~  230 (457)
T 3tfu_A          151 AAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQH  230 (457)
T ss_dssp             HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhC
Confidence            9997764       55 5899999999766544443311              2222332  11112478999998863 


Q ss_pred             -CCCeEEEEeC-CCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhcc
Q 014594          217 -EKPKCIFLTS-PNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGL  287 (422)
Q Consensus       217 -~~~~~i~l~~-p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~  287 (422)
                       +++++|++++ ++||+|.+.+    .+++.++|+. |+++|+||+|.+|...+..  ....+..++++   ||||.++ 
T Consensus       231 ~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdii---t~sK~l~-  306 (457)
T 3tfu_A          231 AGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIM---CVGKALT-  306 (457)
T ss_dssp             GGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE---EECGGGG-
T ss_pred             CCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEE---EEChhhh-
Confidence             4678888887 8999999886    6667777776 9999999999988654322  23333344444   8899886 


Q ss_pred             cc-ccceeeecCHHHHHHHHH-------hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC---CCCc
Q 014594          288 AG-LRVGYGAFPLSIIEYLWR-------AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV---PFLN  356 (422)
Q Consensus       288 ~G-~r~G~i~~~~~~~~~l~~-------~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~  356 (422)
                      +| +|+||+++++++++.+..       ...+|+.|+++++++.++|+..+..+..++++++++++.+.|+++   +.+.
T Consensus       307 gG~~~lG~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~  386 (457)
T 3tfu_A          307 GGYLSLAATLCTADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTARALPAVT  386 (457)
T ss_dssp             TTSSCCEEEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGGGSTTEE
T ss_pred             CCCcceEEEEEcHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCee
Confidence            45 799999999999998862       224578899999999988863110015556667777777777764   3333


Q ss_pred             ccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          357 PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       357 ~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      ..+..|+|+++++++..+..++.+.|+++||.++++.     +++||++.   +.++++++.++|++
T Consensus       387 ~vr~~G~~~~i~l~~~~~~~~~~~~l~~~Gv~v~~~~-----~~lRi~p~~~~t~eei~~~l~~L~~  448 (457)
T 3tfu_A          387 DVRVCGAIGVIECDRPVDLAVATPAALDRGVWLRPFR-----NLVYAMPPYICTPAEITQITSAMVE  448 (457)
T ss_dssp             EEEECSSCEEEEESSCCCHHHHHHHHHHTTEECCCBT-----TEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             eeecCCeEEEEEECCcccHHHHHHHHHHCCeEEEecC-----CEEEEECCCCCCHHHHHHHHHHHHH
Confidence            3456788999999866678999999999999999854     79999854   45555655555543

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=99.97  E-value=1.9e-30  Score=257.05  Aligned_cols=317  Identities=15%  Similarity=0.108  Sum_probs=225.2

Q ss_pred             CCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CC--CCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (422)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~--~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~  165 (422)
                      .++++++|+..+.  ++++ .+|++.+++.+ +.  ....||++...+|+++++++++ .+++|++++|++++++.+++.
T Consensus        50 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~~~v~~~~~Gsea~~~ai~~  128 (429)
T 3k28_A           50 IDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAPTEIENKLAKLVIERVP-SIEIVRMVNSGTEATMSALRL  128 (429)
T ss_dssp             TTCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHHH
T ss_pred             CCCCEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCcCCCCHHHHHHHHHHHHhCC-CCCEEEEeCChHHHHHHHHHH
Confidence            4577899998875  6676 58999998876 22  1245788888999999999997 678999999999999999987


Q ss_pred             hcC--CCCEEEEcCCCchhHHHHHHH-cCCE--EEEecCCCCCC------------CCHHHHHHHhhc--CCCeEEEEeC
Q 014594          166 VLD--PGDKIVDCPPTFTMYEFDAAV-NGAA--VVKVPRKSDFS------------LNVELIADAVER--EKPKCIFLTS  226 (422)
Q Consensus       166 l~~--~gd~Vl~~~p~y~~~~~~~~~-~g~~--~~~v~~~~~~~------------~d~~~l~~~i~~--~~~~~i~l~~  226 (422)
                      +..  ++++|++..|+|+.+...+.. .|..  ...++......            -|++++++.+++  +++++|+++.
T Consensus       129 a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep  208 (429)
T 3k28_A          129 ARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEP  208 (429)
T ss_dssp             HHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECS
T ss_pred             HHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcC
Confidence            654  568999999999754433222 2211  11122111110            189999998863  3566777766


Q ss_pred             CCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceeeecCH
Q 014594          227 PNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (422)
Q Consensus       227 p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~  299 (422)
                      ++|++|.+.+    .+++.++|+. |+++|+||+|.+| ..+..  ....+...+   +.||||.++ +|+|+||+++++
T Consensus       209 ~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~d---i~t~sK~~~-~G~~iG~~~~~~  283 (429)
T 3k28_A          209 VAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGVTPD---LTCLGKVIG-GGLPVGAYGGKA  283 (429)
T ss_dssp             SBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTCCCS---EEEECGGGG-TTSCCEEEEECH
T ss_pred             CCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHHHhCCCCc---eehhhhhhc-CCCCeEEEEEcH
Confidence            6777888887    7777788877 9999999999988 44322  122222233   347899998 699999999999


Q ss_pred             HHHHHHHHh-----cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC----CCCcccCCCceEEEEEeC
Q 014594          300 SIIEYLWRA-----KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV----PFLNPYPSYSNFILCEVT  370 (422)
Q Consensus       300 ~~~~~l~~~-----~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~f~~~~~~  370 (422)
                      ++++.+...     ..+++.+++++.++.++|+..+ .+.+++++++++++.+.|+++    +.....+..++|+++.+.
T Consensus       284 ~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~  362 (429)
T 3k28_A          284 EIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT-PESYVEFERKAEMLEAGLRKAAEKHGIPHHINRAGSMIGIFFT  362 (429)
T ss_dssp             HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESS
T ss_pred             HHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEeeccEEEEEEe
Confidence            999887542     2357889999999999998755 237777888888887777653    544445667888888874


Q ss_pred             CC-------------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC-hhhHHHHHHHHh
Q 014594          371 SG-------------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK-PEHTDALMECLM  419 (422)
Q Consensus       371 ~~-------------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~-~~~~~~l~~al~  419 (422)
                      ..             ....++.+.|+++||.++++.    .+.+|+++.. .++++++.++|+
T Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~r~~~~~t~e~i~~~l~~l~  421 (429)
T 3k28_A          363 DEPVINYDAAKSSNLQFFAAYYREMVEQGVFLPPSQ----FEGLFLSTVHSDADIEATIAAAE  421 (429)
T ss_dssp             SSCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSST----TSCBCCCTTCCHHHHHHHHHHHH
T ss_pred             cCCcccccccccccHHHHHHHHHHHHHCCeEEecCC----CCCEEEECCCCHHHHHHHHHHHH
Confidence            21             114678888999999999875    4678988753 444555555444

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=99.97  E-value=1.7e-29  Score=251.68  Aligned_cols=319  Identities=15%  Similarity=0.147  Sum_probs=210.1

Q ss_pred             CCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~-----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      .+++.++|+..+  .+.++ .+|++.+++.+ +...     ..|+.+...+++++++++++...++|++++|++++++.+
T Consensus        41 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~a  120 (448)
T 3dod_A           41 INGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIAHSTLLGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIA  120 (448)
T ss_dssp             TTSCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTCSCCCCSSSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHH
T ss_pred             CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHH
Confidence            356778999876  34454 47899988876 3322     223334467889999998877678999999999999999


Q ss_pred             HHHhcC----CC----CEEEEcCCCchhHHHHHHHcCC-------------EEEEecCCCCCCC-----------CHHHH
Q 014594          163 MRCVLD----PG----DKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSDFSL-----------NVELI  210 (422)
Q Consensus       163 ~~~l~~----~g----d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~-----------d~~~l  210 (422)
                      ++.+..    +|    |+|++..|+|+.+...+...+.             .+..++.++.+..           |+++|
T Consensus       121 l~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l  200 (448)
T 3dod_A          121 LKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLREL  200 (448)
T ss_dssp             HHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCCCCTTSSSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHH
Confidence            998765    44    9999999999876644433322             2234443333332           48899


Q ss_pred             HHHhh--cCCCeEEEEeCCC-CccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEcc
Q 014594          211 ADAVE--REKPKCIFLTSPN-NPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRT  280 (422)
Q Consensus       211 ~~~i~--~~~~~~i~l~~p~-NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S  280 (422)
                      ++.++  ..++++|+++.++ |++|...+    .+++.++|+. |+++|+||+|.+|...+..  ....+...+   +.+
T Consensus       201 e~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~d---i~t  277 (448)
T 3dod_A          201 AQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPD---LMA  277 (448)
T ss_dssp             HHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCS---EEE
T ss_pred             HHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCC---EEE
Confidence            99886  3456778777777 88887665    6666677765 9999999999988644322  122222233   336


Q ss_pred             Chhhhcccc-ccceeeecCHHHHHHHHH-------h--cCCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHH
Q 014594          281 FSKRAGLAG-LRVGYGAFPLSIIEYLWR-------A--KQPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLF  346 (422)
Q Consensus       281 ~SK~~~~~G-~r~G~i~~~~~~~~~l~~-------~--~~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~  346 (422)
                      |||.++ +| +|+||+++++++++.+..       .  ...++.++++++++.++|+.   +++.+ .++..+..++.|.
T Consensus       278 ~sK~l~-~G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~  356 (448)
T 3dod_A          278 AGKGIT-GGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQ  356 (448)
T ss_dssp             ECGGGG-TTSSCCEEEEEEHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred             eccccc-CCcCceEEEEECHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence            899998 59 599999999999998865       2  23478899999999998863   33444 4444555555555


Q ss_pred             HHHccCCCCcccCCCceEEEEEeCCCCC-----------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHH
Q 014594          347 KLLKDVPFLNPYPSYSNFILCEVTSGMD-----------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALM  415 (422)
Q Consensus       347 ~~L~~~~~~~~~p~~~~f~~~~~~~~~~-----------~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~  415 (422)
                      + +.+++.+...+..|.|+|+.+++..+           ..++.+.|+++||.++++.     +++||+++...+.++++
T Consensus       357 ~-l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----~~iRi~~~~~~t~e~i~  430 (448)
T 3dod_A          357 D-LHALPHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLG-----DVIAFLPPLASTAEELS  430 (448)
T ss_dssp             H-HTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEET-----TEEEECCCTTCCHHHHH
T ss_pred             H-HhcCCCeEEEEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEeccC-----CEEEEECCCCCCHHHHH
Confidence            5 55565444445678899999864322           4788999999999998873     89999754322223444


Q ss_pred             HHHhh
Q 014594          416 ECLMH  420 (422)
Q Consensus       416 ~al~~  420 (422)
                      +++++
T Consensus       431 ~~l~~  435 (448)
T 3dod_A          431 EMVAI  435 (448)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            44443

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=99.97  E-value=5.5e-29  Score=244.95  Aligned_cols=279  Identities=16%  Similarity=0.158  Sum_probs=211.9

Q ss_pred             CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH----HcCCEEEEecCC
Q 014594          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRK  200 (422)
Q Consensus       125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~  200 (422)
                      +|+++...+|++++++++|.  +++++++|+++++..++++++++||+|+++.|+|..+...+.    ..|++++.++.+
T Consensus        77 r~~~p~~~~l~~~la~~~g~--~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~  154 (414)
T 3ndn_A           77 RYGNPTVSVFEERLRLIEGA--PAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD  154 (414)
T ss_dssp             TTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred             CCCChHHHHHHHHHHHHHCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC
Confidence            45667778999999999995  578999999999999999999999999999999998766553    489999999853


Q ss_pred             CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (422)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~  279 (422)
                           |+++++++++ +++++|++++|+||||.+.+.+++.++|+. |+++|+||+|........ .    ..+.++++.
T Consensus       155 -----d~~~l~~ai~-~~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~-~----~~g~div~~  223 (414)
T 3ndn_A          155 -----DLSQWERALS-VPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQG-F----PLGVDVVVY  223 (414)
T ss_dssp             -----CHHHHHHHTS-SCCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCC-G----GGTCSEEEE
T ss_pred             -----CHHHHHHhcC-CCCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCCc-h----hcCCCeEec
Confidence                 8999999997 689999999999999999999999999987 999999999984321111 1    234458899


Q ss_pred             cChhhhcccc-ccceeeecCHHHHH-HHHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC
Q 014594          280 TFSKRAGLAG-LRVGYGAFPLSIIE-YLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF  354 (422)
Q Consensus       280 S~SK~~~~~G-~r~G~i~~~~~~~~-~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~  354 (422)
                      |+||.++.+| +++|+++++++.+. .+.....  ..+.++....++...+   +++. ..++..++++++.+.|++.+.
T Consensus       224 S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l---~~l~~r~~~~~~~a~~l~~~L~~~p~  300 (414)
T 3ndn_A          224 SGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAMSAFNAWVLLKGL---ETLAIRVQHSNASAQRIAEFLNGHPS  300 (414)
T ss_dssp             ETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHG---GGHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred             cCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            9999999878 89999999988776 5553322  2345555555444444   4455 777788899999999988765


Q ss_pred             Cc--ccCC----------------CceEEEEEeCCC-----CCHHHHHHHHHhCCcEEEeCCC-----------------
Q 014594          355 LN--PYPS----------------YSNFILCEVTSG-----MDAKKLKDDLAKMGVMIRHYNN-----------------  394 (422)
Q Consensus       355 ~~--~~p~----------------~~~f~~~~~~~~-----~~~~~~~~~L~~~gI~v~~~~~-----------------  394 (422)
                      +.  .+|.                .|.+++++++++     .+...|.+.|...++.+..|+.                 
T Consensus       301 v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~  380 (414)
T 3ndn_A          301 VRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLIDISNNLGDAKSLVTHPATTTHRAMGP  380 (414)
T ss_dssp             EEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTCTTHH
T ss_pred             EeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhCccceEcCCCCCCCceeeCccccccccCCH
Confidence            43  2332                477899999742     2355677777666666655442                 


Q ss_pred             ------CCCCCeEEEEecChhhHHHHHHHHhh
Q 014594          395 ------KELKGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       395 ------~~~~~~iRis~~~~~~~~~l~~al~~  420 (422)
                            ...+++||||++.+. .+++.+.|++
T Consensus       381 ~~~~~~g~~~~~iRlsvG~e~-~~dli~dl~~  411 (414)
T 3ndn_A          381 EGRAAIGLGDGVVRISVGLED-TDDLIADIDR  411 (414)
T ss_dssp             HHHHHTTCCTTEEEEECCSSC-HHHHHHHHHH
T ss_pred             HHHHhcCCCCCeEEEEeCcCC-HHHHHHHHHH
Confidence                  113679999999765 4666666553

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=99.96  E-value=1.4e-29  Score=252.55  Aligned_cols=323  Identities=14%  Similarity=0.133  Sum_probs=216.4

Q ss_pred             CCCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-CC---C-C-CCCCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHH
Q 014594           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK---F-P-YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (422)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~---~-~-~~y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~  160 (422)
                      +.+++.+||+..|  .++++ .+|++.+++.+ +.   + . ..|+.+...+|+++++++++.+ .++|++|+|++++++
T Consensus        60 d~~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~  139 (453)
T 4ffc_A           60 DADGNSFIDLGAGIAVTTVGASHPAVAAAIADQATHFTHTCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVE  139 (453)
T ss_dssp             ETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHH
T ss_pred             eCCCCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhccccccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHH
Confidence            3456789999987  66776 48999888765 21   1 1 1245555678999999998754 579999999999999


Q ss_pred             HHHHHhcC--CCCEEEEcCCCchhHHHHHHHcCC--------------EEEEecCC----CCCCCC--------HHHHHH
Q 014594          161 LIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGA--------------AVVKVPRK----SDFSLN--------VELIAD  212 (422)
Q Consensus       161 ~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~--------------~~~~v~~~----~~~~~d--------~~~l~~  212 (422)
                      .+++....  .+++|++..++|+.+...+...+.              .+..++..    +.++.+        ++.+++
T Consensus       140 ~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~  219 (453)
T 4ffc_A          140 NAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIET  219 (453)
T ss_dssp             HHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHH
Confidence            99986542  458999999999866655443321              34555533    223343        356666


Q ss_pred             HhhcCCCeEEEEeCCCCccC-cCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhh
Q 014594          213 AVEREKPKCIFLTSPNNPDG-SIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKR  284 (422)
Q Consensus       213 ~i~~~~~~~i~l~~p~NPtG-~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~  284 (422)
                      .+. .+..+++++.|+|++| .+.+    .+++.++|+. |+++|+||+|.+|...+..  ....+...+   +.||||.
T Consensus       220 ~i~-~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pd---i~t~sK~  295 (453)
T 4ffc_A          220 QIG-AQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPD---IVTMAKG  295 (453)
T ss_dssp             HTC-GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS---EEEECGG
T ss_pred             hcC-CCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcc---hHhhhhh
Confidence            664 3345555566666665 4444    5556666666 9999999999988644321  122222222   4478999


Q ss_pred             hccccccceeeecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCccc
Q 014594          285 AGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPY  358 (422)
Q Consensus       285 ~~~~G~r~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~  358 (422)
                      ++. |+|+||+++++++++.+....  .+|+.|++++.++.++|+.   +++.+ .++.....++.|.+.+++++.+...
T Consensus       296 ~~~-G~~~G~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~  374 (453)
T 4ffc_A          296 IAG-GMPLSAVTGRAELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEV  374 (453)
T ss_dssp             GGT-TSSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEE
T ss_pred             hcC-CcCeEEEEECHHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE
Confidence            985 999999999999988776433  3578899999999998873   34444 4444444455555555556655455


Q ss_pred             CCCceEEEEEeCC-------CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594          359 PSYSNFILCEVTS-------GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       359 p~~~~f~~~~~~~-------~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  420 (422)
                      +..|+|+++++..       ..+..++.+.|+++||.++++..  .++++||+++...+.+++++++++
T Consensus       375 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~~~~~~t~e~i~~~l~~  441 (453)
T 4ffc_A          375 RGRGAMLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILTCGT--FGNVIRLLPPLVIGDDLLDEGITA  441 (453)
T ss_dssp             EEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEECT--TSCEEEECCCTTCCHHHHHHHHHH
T ss_pred             EeeceEEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEecCCC--CCCEEEEECCCCCCHHHHHHHHHH
Confidence            6678899998842       22367788899999999998753  247999986633223444444444

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=99.96  E-value=3.8e-29  Score=241.39  Aligned_cols=286  Identities=15%  Similarity=0.044  Sum_probs=204.5

Q ss_pred             CCCC-CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC--EEEEcCCCchhHH---HHHHHcCCEEEEe
Q 014594          124 YIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD--KIVDCPPTFTMYE---FDAAVNGAAVVKV  197 (422)
Q Consensus       124 ~~y~-~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd--~Vl~~~p~y~~~~---~~~~~~g~~~~~v  197 (422)
                      ..|+ +++..+|+++++++++.+  ..++++|+++++..++++++++||  .|+++.++|....   ..+...|++++.+
T Consensus        41 ~~y~~~~~~~~l~~~la~~~~~~--~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v  118 (357)
T 3lws_A           41 DQYGTGAIIEPFEQKFADVLGMD--DAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKELHPIETILV  118 (357)
T ss_dssp             EETTEETTHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHSSCEEEEC
T ss_pred             ccccCChHHHHHHHHHHHHhCCC--cEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhccCcEEEEe
Confidence            4564 357899999999999973  345557788899999999988888  6777777664332   2345679999999


Q ss_pred             cCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCcc-CcCCCHHHHHHHHcC----CCeEEEccCCcccc---CCCchhhhh
Q 014594          198 PRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD-GSIINDEDLLKILEM----PILVVLDEAYTEFS---GLESRMEWV  269 (422)
Q Consensus       198 ~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt-G~~~~~e~l~~i~~~----~~~li~Deay~~~~---~~~~~~~~~  269 (422)
                      +. +++.+|+++++++.   ++++|++++||||| |.+++.+++++|++.    |+++|+||+|....   .+.+.....
T Consensus       119 ~~-~~~~~d~~~l~~~~---~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~  194 (357)
T 3lws_A          119 GA-ADRLMTLDEIKALP---DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA  194 (357)
T ss_dssp             SC-TTSCCCHHHHHTCC---SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH
T ss_pred             cC-CCCCcCHHHHhcCc---CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH
Confidence            85 45689999999873   38999999999998 999998877777653    99999999987211   112222222


Q ss_pred             hcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC----CCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHH
Q 014594          270 KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----YNVSVAAEVAACAALQNPIYLEVKEALIKERERL  345 (422)
Q Consensus       270 ~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~----~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l  345 (422)
                      ...+  +++.|+||.++.++  .||+++++++++.+.+....    .......+.++..+|++  +.+..+++.++++++
T Consensus       195 ~~~d--~~~~s~sK~~~~~~--gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~l  268 (357)
T 3lws_A          195 GLFD--SIYISFYKGLGGIA--GAILAGPAAFCQTARIWKRRYGGDLISLYPYIVSADYYYEL--RKDRMGQYYEQAKQL  268 (357)
T ss_dssp             TTSS--EEEEESSSTTCCSS--CEEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH--HTTCHHHHHHHHHHH
T ss_pred             hcCC--EEEEeccccCCCCc--eEEEEcCHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence            2222  44789999984333  29999999999988755422    12223334444455543  444334467888999


Q ss_pred             HHHHccCCCCcc--cCCCceEEEEEeCCC--CCHHHHHHHHHhCCcEEEeCCCCC-CCCeEEEEecCh---hhHHHHHHH
Q 014594          346 FKLLKDVPFLNP--YPSYSNFILCEVTSG--MDAKKLKDDLAKMGVMIRHYNNKE-LKGYVRVSVGKP---EHTDALMEC  417 (422)
Q Consensus       346 ~~~L~~~~~~~~--~p~~~~f~~~~~~~~--~~~~~~~~~L~~~gI~v~~~~~~~-~~~~iRis~~~~---~~~~~l~~a  417 (422)
                      .+.|++++.+.+  .|+.++|+|++++..  .+.+++.+.|.++||.++++..+. ...++|++++..   .+.+++.++
T Consensus       269 ~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~a  348 (357)
T 3lws_A          269 AEQFNALPGVHTTPEVPVSNMFHLHFDGQAADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAG  348 (357)
T ss_dssp             HHHHHTSTTEEEESSSCSSSEEEEEEESCHHHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGSCHHHHHHH
T ss_pred             HHHHHhCCCCeeccCCCcceEEEEEecCChHHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhhcCHHHHHHH
Confidence            999999866654  578899999999743  236788888999999999885432 234999998742   345788888


Q ss_pred             Hhhh
Q 014594          418 LMHL  421 (422)
Q Consensus       418 l~~l  421 (422)
                      +++|
T Consensus       349 l~~l  352 (357)
T 3lws_A          349 FARL  352 (357)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8876

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.96  E-value=2.9e-28  Score=240.08  Aligned_cols=315  Identities=15%  Similarity=0.104  Sum_probs=222.3

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcCC---CCCCCCC-------cchH----HHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQLK---FPYIYPD-------PESR----RLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~---~~~~y~~-------~~~~----~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      +.++|..++++.  +|++.+++.+..   +..+||.       ....    .+++.+++++|+++++|++++| ++++..
T Consensus        26 ~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~~sG-t~a~~~  102 (417)
T 3n0l_A           26 EGLEMIASENFT--LPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFANVQPNSG-SQANQG  102 (417)
T ss_dssp             HSEECCTTCCCC--CHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSH-HHHHHH
T ss_pred             cCeeeecccCCC--CHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCCCCcceEeccH-HHHHHH
Confidence            458998888876  789999998632   2123332       1223    3455888999998878888888 799999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHH---HHHH--cCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEF---DAAV--NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~--~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (422)
                      ++++++++||+|+++.|+|..+..   ....  .+..++.++.++++.+|++++++.++++++++|++++|+|  |.+++
T Consensus       103 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--G~~~~  180 (417)
T 3n0l_A          103 VYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKEKPKLIVCGASAY--ARVID  180 (417)
T ss_dssp             HHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHHCCSEEEECCSSC--CSCCC
T ss_pred             HHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhcCCeEEEECCccc--CccCC
Confidence            999999999999999999976543   2222  3456677776677789999999999756899999888886  89999


Q ss_pred             HHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcCCC-
Q 014594          237 DEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQPY-  312 (422)
Q Consensus       237 ~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~~-  312 (422)
                      .+++.++|+. |+++|+||+|.. +.+.+.....+  ...++++.|+||.+  +|+|+||++++ +++++.+......+ 
T Consensus       181 l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~--~~~di~~~s~sK~l--~g~~~G~~~~~~~~~~~~~~~~~~~~~  256 (417)
T 3n0l_A          181 FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPF--PYAHVVSSTTHKTL--RGPRGGIIMTNDEELAKKINSAIFPGI  256 (417)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCT--TTCSEEEEESSTTT--CSCSCEEEEESCHHHHHHHHHHHTTTT
T ss_pred             HHHHHHHHHHcCCEEEEECccchhhhhcccCCCcc--ccceEEEeeCcccc--CCCCeeEEEECCHHHHHHHhhhhCCcc
Confidence            9999999988 999999999742 22111111111  12358899999976  78899999998 78888887765543 


Q ss_pred             --CCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccC--CCceEEEEEeC-CCCCHHHHHHHHHh
Q 014594          313 --NVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYP--SYSNFILCEVT-SGMDAKKLKDDLAK  384 (422)
Q Consensus       313 --~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p--~~~~f~~~~~~-~~~~~~~~~~~L~~  384 (422)
                        +.+...+.++..++..  .++.+ .+++++++++++.+.|++.+ +.+.+  ..++++|+.++ .+.+.+.+.+.|.+
T Consensus       257 ~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  335 (417)
T 3n0l_A          257 QGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDRK-FKLVSDGTDNHLVLMSFLDREFSGKDADLALGN  335 (417)
T ss_dssp             CSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSSSEEEEECTTSSSCHHHHHHHHHH
T ss_pred             cCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCC-ceeccCCCCceEEEEEcccCCCCHHHHHHHHHH
Confidence              4445555555544443  24445 88889999999999998865 33333  56778999885 35678889999999


Q ss_pred             CCcEEEeCCCC------CCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014594          385 MGVMIRHYNNK------ELKGYVRVSVG-------KPEHTDALMECLMH  420 (422)
Q Consensus       385 ~gI~v~~~~~~------~~~~~iRis~~-------~~~~~~~l~~al~~  420 (422)
                      +||.++++..+      ...+.+|+++.       ++++++++.++|++
T Consensus       336 ~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~  384 (417)
T 3n0l_A          336 AGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIAD  384 (417)
T ss_dssp             TTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             cCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHH
Confidence            99999865431      22467999975       24556666666553

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.96  E-value=1.1e-28  Score=239.48  Aligned_cols=297  Identities=15%  Similarity=0.137  Sum_probs=222.5

Q ss_pred             CCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh---cCCCCEEEEcCCCchhHH
Q 014594          109 PPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV---LDPGDKIVDCPPTFTMYE  184 (422)
Q Consensus       109 ~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l---~~~gd~Vl~~~p~y~~~~  184 (422)
                      .++++++++.+ +.....+|.+...++|+++++++|.+  ++++++|+++++..+++++   +++||+|+++.|+|+.+.
T Consensus        11 ~~~~v~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~~   88 (375)
T 2fnu_A           11 LDKEDKKAVLEVLNSKQLTQGKRSLLFEEALCEFLGVK--HALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATA   88 (375)
T ss_dssp             CCHHHHHHHHHHHTSSCCSSSHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHH
T ss_pred             CCHHHHHHHHHHHHcCcccCChHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHhHH
Confidence            56889999887 33333446667889999999999975  8999999999999999999   899999999999999999


Q ss_pred             HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCC
Q 014594          185 FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE  263 (422)
Q Consensus       185 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~  263 (422)
                      ..++..|++++.++.+++..+|++++++.++ +++++|++++|   ||.+.+.+++.++++. |+++|+||+|..+....
T Consensus        89 ~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~  164 (375)
T 2fnu_A           89 NMLLESGYTPVFAGIKNDGNIDELALEKLIN-ERTKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQ  164 (375)
T ss_dssp             HHHHHTTCEEEECCBCTTSSBCGGGSGGGCC-TTEEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEET
T ss_pred             HHHHHCCCEEEEeccCCCCCCCHHHHHhhcC-cCceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccccCCeEC
Confidence            9999999999999976655799999999997 68999888876   9999999999999987 99999999998654211


Q ss_pred             chhhhhhcCCcEEEEccCh--hhhccccccceeeec-C-HHHHHHHHHhcCC------------------CCCcHHHHHH
Q 014594          264 SRMEWVKKHDNLIVLRTFS--KRAGLAGLRVGYGAF-P-LSIIEYLWRAKQP------------------YNVSVAAEVA  321 (422)
Q Consensus       264 ~~~~~~~~~~~~i~~~S~S--K~~~~~G~r~G~i~~-~-~~~~~~l~~~~~~------------------~~~~~~~~~a  321 (422)
                      .  ..+...+ .+.+.|||  |.++. |  +|++++ + +++++.+......                  +..+.+...+
T Consensus       165 ~--~~~~~~~-~i~~~s~s~~K~~~~-g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  238 (375)
T 2fnu_A          165 N--KKVGGFA-LASVFSFHAIKPITT-A--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSAL  238 (375)
T ss_dssp             T--EETTSSS-SEEEEECCTTSSSCC-S--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHH
T ss_pred             C--eeccccC-CeEEEeCCCCCCccc-c--CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHH
Confidence            1  1122222 37778888  98874 6  788877 4 7788877654321                  1344444433


Q ss_pred             HHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC-----Cc-eEEEEEeCC-CC-CHHHHHHHHHhCCcEEEeC
Q 014594          322 ACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPS-----YS-NFILCEVTS-GM-DAKKLKDDLAKMGVMIRHY  392 (422)
Q Consensus       322 a~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~-----~~-~f~~~~~~~-~~-~~~~~~~~L~~~gI~v~~~  392 (422)
                      +...+   ++++ ..++.+++++++.+.|++++.+.+.+.     .. .++++.++. +. +.+++.+.|.++||.++..
T Consensus       239 ~~~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~  315 (375)
T 2fnu_A          239 GLSQL---KKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVH  315 (375)
T ss_dssp             HHHHH---TTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBCC
T ss_pred             HHHHH---HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccccchHHHHHHHHHHCCCCcccc
Confidence            33332   3455 788889999999999999855544322     22 345778763 23 6889999999999999832


Q ss_pred             CCCC--------------C-------CCeEEEEec---ChhhHHHHHHHHhh
Q 014594          393 NNKE--------------L-------KGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       393 ~~~~--------------~-------~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      ..+.              .       .+++||+++   +.++++++.++|+.
T Consensus       316 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~  367 (375)
T 2fnu_A          316 YKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLK  367 (375)
T ss_dssp             CCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             ccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHH
Confidence            2110              1       268999998   56677777777664

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=99.96  E-value=2.1e-29  Score=252.32  Aligned_cols=322  Identities=13%  Similarity=0.147  Sum_probs=225.3

Q ss_pred             CCCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-CC-CC-----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK-FP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (422)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~-~~-----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~  160 (422)
                      +.+++++||+.+|  .++++ .+|++.+|+.+ +. ..     ..|+.+...+|.++++++++.+.++|++++|++++++
T Consensus        51 d~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~  130 (472)
T 3hmu_A           51 DSEGEEILDAMAGLWCVNIGYGRDELAEVAARQMRELPYYNTFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEAND  130 (472)
T ss_dssp             ETTCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCSSSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHH
T ss_pred             ECCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHH
Confidence            3457789999887  56675 57999988865 21 11     1345555678999999999877789999999999999


Q ss_pred             HHHHHhcC--------CCCEEEEcCCCchhHHHHHHHcCC------------EEEEecCCCCCC----CC--------HH
Q 014594          161 LIMRCVLD--------PGDKIVDCPPTFTMYEFDAAVNGA------------AVVKVPRKSDFS----LN--------VE  208 (422)
Q Consensus       161 ~~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~------------~~~~v~~~~~~~----~d--------~~  208 (422)
                      .+++.+..        ++++|++..|+|+.+...+...+.            .+..++.+..+.    .|        ++
T Consensus       131 ~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~  210 (472)
T 3hmu_A          131 TNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGDMDPEEFGLARAR  210 (472)
T ss_dssp             HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTTCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcccCHHHHHHHHHH
Confidence            99998764        468999999999877655544333            244444222111    34        78


Q ss_pred             HHHHHhhc---CCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCc--hhhhhhcCCcEEEE
Q 014594          209 LIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVL  278 (422)
Q Consensus       209 ~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~~  278 (422)
                      +|++.+.+   +++++|+++.++|++|.+.+    .+++.++|+. |+++|+||+|.+|...+.  .....+..++++  
T Consensus       211 ~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~--  288 (472)
T 3hmu_A          211 ELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIM--  288 (472)
T ss_dssp             HHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE--
T ss_pred             HHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCcee--
Confidence            88888853   45677777777888898886    6777777776 999999999998865442  222233334443  


Q ss_pred             ccChhhhccccccceeeecCHHHHHHHHH----hcCCCCCcHHHHHHHHHHccCChHHHHHHHHH-HHHHHHHHHHcc--
Q 014594          279 RTFSKRAGLAGLRVGYGAFPLSIIEYLWR----AKQPYNVSVAAEVAACAALQNPIYLEVKEALI-KERERLFKLLKD--  351 (422)
Q Consensus       279 ~S~SK~~~~~G~r~G~i~~~~~~~~~l~~----~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~-~~~~~l~~~L~~--  351 (422)
                       +|||.++.+|+|+||+++++++++.+..    ...+|+.|+++++++.++|+..+..+..++++ ++.+++++.|++  
T Consensus       289 -t~sK~l~gg~~plG~v~~~~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~  367 (472)
T 3hmu_A          289 -TIAKGLSSGYAPIGGSIVCDEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALT  367 (472)
T ss_dssp             -EECGGGTTTSSCCEEEEEEHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGG
T ss_pred             -eechhhhcCCcceEEEEECHHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence             5789988555999999999999998831    12357889999999999986321111455555 556666666554  


Q ss_pred             -CCCCcccCCCceEEEEEeCCCC------------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe---cChhhHHHHH
Q 014594          352 -VPFLNPYPSYSNFILCEVTSGM------------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV---GKPEHTDALM  415 (422)
Q Consensus       352 -~~~~~~~p~~~~f~~~~~~~~~------------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~---~~~~~~~~l~  415 (422)
                       ++.+...+..|+|+++++....            ...++.+.|+++||.+++++     +++||++   .+.++++++.
T Consensus       368 ~~~~v~~vr~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-----~~iRi~p~~~~t~e~i~~~l  442 (472)
T 3hmu_A          368 DHPLVGEAKIVGMMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHVG-----DRMIISPPLVITPAEIDEMF  442 (472)
T ss_dssp             GSTTEEEEEEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEET-----TEEEECCCTTCCHHHHHHHH
T ss_pred             cCCCeEEEEecCceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEecC-----CEEEEECCCCCCHHHHHHHH
Confidence             4444445667888888885321            15678889999999999874     8999994   3555566655


Q ss_pred             HHHhh
Q 014594          416 ECLMH  420 (422)
Q Consensus       416 ~al~~  420 (422)
                      ++|++
T Consensus       443 ~~l~~  447 (472)
T 3hmu_A          443 VRIRK  447 (472)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            55543

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.96  E-value=1.7e-27  Score=227.44  Aligned_cols=269  Identities=17%  Similarity=0.127  Sum_probs=202.0

Q ss_pred             HHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEecCCCCCCCCHH
Q 014594          133 RLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVE  208 (422)
Q Consensus       133 ~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~  208 (422)
                      ++++++++++|.+ +.+++++| ++++..++++++++||+|+++.|+|+.+...+    +..|++++.++.     .|++
T Consensus         2 ~l~~~la~~~g~~-~~i~~~sG-~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~   74 (331)
T 1pff_A            2 ALEGKIAKLEHAE-ACAATASG-MGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM-----AVPG   74 (331)
T ss_dssp             HHHHHHHHHHTCS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-----TSTT
T ss_pred             hHHHHHHHHhCCC-eEEEeCCh-HHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC-----CCHH
Confidence            6899999999975 55555555 89999999999999999999999999876554    458999999874     4789


Q ss_pred             HHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC--CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhc
Q 014594          209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG  286 (422)
Q Consensus       209 ~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~  286 (422)
                      ++++.++ +++++|++++|+||||.+++.+++.++++.  |+++|+||+|..+..... .    ..++++++.|+||.++
T Consensus        75 ~l~~~i~-~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~-~----~~~~d~~~~s~~K~~~  148 (331)
T 1pff_A           75 NIEKHLK-PNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNP-L----DLGVDIVVHSATKYIN  148 (331)
T ss_dssp             HHHHTCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCG-G----GGTCSEEEEETTTTTS
T ss_pred             HHHHhhc-CCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCCh-h----hcCCcEEEEECccccC
Confidence            9999997 689999999999999999999999999976  899999999986543211 1    2456799999999999


Q ss_pred             ccccc-ceeeecCH-HHHHHHHHhcCC-C--CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC-------
Q 014594          287 LAGLR-VGYGAFPL-SIIEYLWRAKQP-Y--NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP-------  353 (422)
Q Consensus       287 ~~G~r-~G~i~~~~-~~~~~l~~~~~~-~--~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~-------  353 (422)
                      .+|.| +||+++++ ++++.+...... +  +.+++.+.++...++   +.. ..+...++.+.+.+.|++.+       
T Consensus       149 ~~~~r~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~  225 (331)
T 1pff_A          149 GHTDVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTL---TLDMRVKRAAENAQKVAEFLHEHKAVKKVYY  225 (331)
T ss_dssp             SSSSCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHCTTCCCEEC
T ss_pred             CCCCceEEEEEeCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcc---hHHHHHHHHHHHHHHHHHHHHcCCCeeEEEC
Confidence            99999 89999998 999988876655 3  567777777666664   223 44444555555555554321       


Q ss_pred             -------CCccc----CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-------------------------CCC
Q 014594          354 -------FLNPY----PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-------------------------KEL  397 (422)
Q Consensus       354 -------~~~~~----p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~-------------------------~~~  397 (422)
                             ...+.    +..++++.+.++   +.+++.+.|.++||.++..+.                         .+.
T Consensus       226 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~  302 (331)
T 1pff_A          226 PGLPDHPGHEIAKKQMKMFGSMIAFDVD---GLEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGL  302 (331)
T ss_dssp             TTSTTSTTHHHHHHHCSSCCSEEEEECS---SHHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTC
T ss_pred             CCCCCCccHHHHHhhCCCCceEEEEEEC---CHHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCC
Confidence                   11111    124678888885   677888888899998876521                         011


Q ss_pred             -CCeEEEEecCh---hhHHHHHHHHhh
Q 014594          398 -KGYVRVSVGKP---EHTDALMECLMH  420 (422)
Q Consensus       398 -~~~iRis~~~~---~~~~~l~~al~~  420 (422)
                       ++++||+++..   ++++++.++++.
T Consensus       303 ~~~~iRis~~~~~t~~~i~~l~~~l~~  329 (331)
T 1pff_A          303 TDNLIRLSVGCENVQDIIDDLKQALDL  329 (331)
T ss_dssp             CTTEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred             CCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence             58999999853   445555555544

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=99.96  E-value=1.4e-27  Score=239.36  Aligned_cols=316  Identities=16%  Similarity=0.102  Sum_probs=227.2

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCC----cc----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 014594           96 DIVKIDANENPYGPPPEVREALGQL-KFPYIYPD----PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~----~~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l  166 (422)
                      .++.|+ +..+ ...|++.+++.+. ...+.|+.    .|    ..++++.+++++|++. .+++++|+++++..++.++
T Consensus        67 ~~~~lg-~~~~-~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~-~~~~~~ggt~a~~~al~~~  143 (474)
T 1wyu_B           67 TFYPLG-SCTM-KYNPKLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYLKALTGMDA-ITLEPAAGAHGELTGILII  143 (474)
T ss_dssp             SCCCBT-TTCC-CCCCHHHHHHHHTTSSCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE-EECCCSSHHHHHHHHHHHH
T ss_pred             Cccccc-cccc-cCCHHHHHHHHHHHHhcCCCCchhhChHHHHHHHHHHHHHHHHHCCCc-eeecChHHHHHHHHHHHHH
Confidence            457777 4333 2335566666542 22233422    23    3456777777788764 4778899999998765543


Q ss_pred             ----cCCCC-----EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC-CC
Q 014594          167 ----LDPGD-----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI-IN  236 (422)
Q Consensus       167 ----~~~gd-----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~-~~  236 (422)
                          .++||     +|+++.|+|+.+...++..|++++.++.++++.+|+++|+++++ +++++|++++| ||||.+ .+
T Consensus       144 ~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~~~~~d~~~L~~~i~-~~t~~v~~~~p-n~~G~~~~~  221 (474)
T 1wyu_B          144 RAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEVDLEALKRELG-PHVAALMLTNP-NTLGLFERR  221 (474)
T ss_dssp             HHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCTTSSBCHHHHHHHCS-TTEEEEEECSS-CTTSCCCTT
T ss_pred             HHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCCCCCcCHHHHHHhhC-CCceEEEEECC-CCCcccCCC
Confidence                35887     99999999999999999999999999987778899999999997 68999999998 689998 58


Q ss_pred             HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccc-c---ccceeeecCHHHHHHHHH-h--
Q 014594          237 DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA-G---LRVGYGAFPLSIIEYLWR-A--  308 (422)
Q Consensus       237 ~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-G---~r~G~i~~~~~~~~~l~~-~--  308 (422)
                      .+++.++++. |+++|+||+|..+..+....   ...+.++++.|++|.++.+ |   .|+||+++++++++.+.. .  
T Consensus       222 l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~---~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~  298 (474)
T 1wyu_B          222 ILEISRLCKEAGVQLYYDGANLNAIMGWARP---GDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVE  298 (474)
T ss_dssp             HHHHHHHHHHHTCEEEEEGGGGGGTTTTCCH---HHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEE
T ss_pred             HHHHHHHHHHcCCEEEEeCchhhhhccCCCc---ccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeee
Confidence            9999999987 99999999997655322111   1224568889999998766 4   599999999988776541 0  


Q ss_pred             ------------------cCCCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceE--E
Q 014594          309 ------------------KQPYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNF--I  365 (422)
Q Consensus       309 ------------------~~~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f--~  365 (422)
                                        ...++.+.+++.++..++..  .++++ ..+++.++++++.+.|++++ +.+......|  +
T Consensus       299 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~  377 (474)
T 1wyu_B          299 RGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKG-YRVPYDGPSMHEF  377 (474)
T ss_dssp             ECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CBCSSCSSCCSCE
T ss_pred             ccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-cEecCCCCcceEE
Confidence                              01234577788888888764  34555 78889999999999998874 4432223333  5


Q ss_pred             EEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEEecC---hhhHHHHHHHHhh
Q 014594          366 LCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVGK---PEHTDALMECLMH  420 (422)
Q Consensus       366 ~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~-~~~~~iRis~~~---~~~~~~l~~al~~  420 (422)
                      +++++.+.+..++.+.|.++||.+.....+ ...+++||+++.   .++++++.++|+.
T Consensus       378 ~~~~~~~~~~~~l~~~L~~~Gi~~~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~  436 (474)
T 1wyu_B          378 VAQPPEGFRALDLAKGLLELGFHPPTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGA  436 (474)
T ss_dssp             EEBCSTTCCHHHHHHHHHHTTCCCCEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHH
T ss_pred             EEEcCCCCCHHHHHHHHHHCCccccccccccccCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            667655678899999999999986321111 236899999984   5556666666654

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=99.96  E-value=1.8e-28  Score=242.69  Aligned_cols=316  Identities=17%  Similarity=0.133  Sum_probs=216.3

Q ss_pred             CCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (422)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~  165 (422)
                      .++++++|+..|.  ++++ .+|++.+++.+ +...  +.|+++...+|+++++++++ ++++|++++|++++++.+++.
T Consensus        49 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~ggsea~~~al~~  127 (427)
T 3fq8_A           49 VDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSFGAPCALENVLAEMVNDAVP-SIEMVRFVNSGTEACMAVLRI  127 (427)
T ss_dssp             TTSCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHHH
T ss_pred             CCCCEEEECCCchhhhccCCCCHHHHHHHHHHHHhCCCcCCCCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHH
Confidence            4567899999885  5665 58999998876 3322  33555667899999999998 688999999999999999953


Q ss_pred             hc--CCCCEEEEcCCCchhHHHHHHHc-CC-------------------EEEEecCCCCCCCCHHHHHHHhhcC--CCeE
Q 014594          166 VL--DPGDKIVDCPPTFTMYEFDAAVN-GA-------------------AVVKVPRKSDFSLNVELIADAVERE--KPKC  221 (422)
Q Consensus       166 l~--~~gd~Vl~~~p~y~~~~~~~~~~-g~-------------------~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~  221 (422)
                      ..  ..+++|++..|+|+.+...+... |.                   .++.++.     -|++++++.+++.  ++++
T Consensus       128 a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~  202 (427)
T 3fq8_A          128 MRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPY-----NDLEAVKALFAENPGEIAG  202 (427)
T ss_dssp             HHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET-----TCHHHHHHHHHHSTTTEEE
T ss_pred             HHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCC-----CCHHHHHHHHHhCCCCEEE
Confidence            31  23478999999997543222111 11                   1333332     1899999998752  6788


Q ss_pred             EEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeee
Q 014594          222 IFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA  296 (422)
Q Consensus       222 i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~  296 (422)
                      |++++++|++|.+.+    .+++.++|+. |+++|+||+|.+| ..+... .....+....+.||||.++ +|+|+||++
T Consensus       203 vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~-~~~~~~~~~di~t~sK~~~-~G~~~G~~~  279 (427)
T 3fq8_A          203 VILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGG-VQEKFGVTPDLTTLGKIIG-GGLPVGAYG  279 (427)
T ss_dssp             EEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTH-HHHHTTCCCSEEEECGGGG-TTSSCEEEE
T ss_pred             EEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcch-hhHhcCCCCChhhhhhhhh-CCcceEEEE
Confidence            888888889999999    8888888876 9999999999988 433221 1111111122458899999 899999999


Q ss_pred             cCHHHHHHHHHh-----cCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEE
Q 014594          297 FPLSIIEYLWRA-----KQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILC  367 (422)
Q Consensus       297 ~~~~~~~~l~~~-----~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~  367 (422)
                      +++++++.+...     ..+++.++++++++.++|+   ++++.+ .++.....++.|.+.+.+++.....+..++|+++
T Consensus       280 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~  359 (427)
T 3fq8_A          280 GKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGF  359 (427)
T ss_dssp             ECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEE
T ss_pred             EcHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEEEE
Confidence            999999887652     2346789999999998885   333333 3333334444444444444443334567889999


Q ss_pred             EeCCC-CC------------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHhh
Q 014594          368 EVTSG-MD------------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLMH  420 (422)
Q Consensus       368 ~~~~~-~~------------~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~~  420 (422)
                      +++.. ..            ..++.+.|.++||.++++..    ..+|+++. +.++++++.++|++
T Consensus       360 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~----~r~~~~~~~t~e~i~~~l~~l~~  422 (427)
T 3fq8_A          360 FFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQF----EAGFTSLAHTEEDIDATLAAART  422 (427)
T ss_dssp             ESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT----SCEECCTTCCHHHHHHHHHHHHH
T ss_pred             EEecCccccccccccccHHHHHHHHHHHHHCCcEEecCCC----CCEEeeCcCCHHHHHHHHHHHHH
Confidence            98642 11            45788899999999998762    35666654 34555555555543

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=99.96  E-value=4.6e-29  Score=248.71  Aligned_cols=324  Identities=15%  Similarity=0.123  Sum_probs=213.9

Q ss_pred             CCCCCCeEEcCCC--CCCCCC-CHHHHHHHhc-CCCCC-----CCCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHH
Q 014594           91 GRKPEDIVKIDAN--ENPYGP-PPEVREALGQ-LKFPY-----IYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (422)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~~~~~-----~y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~  160 (422)
                      +.+++.++|+..+  .++++. +|++.+++.+ +....     .|+.+...+|++++++.++.. .++|++|+|++++++
T Consensus        57 d~~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~  136 (451)
T 3oks_A           57 DVDGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDFTHTCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVE  136 (451)
T ss_dssp             ETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTCSCCTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHH
T ss_pred             ECCCCEEEEcCCCccccccCCCCHHHHHHHHHHHHhcccccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHH
Confidence            3456789999987  666754 7999988875 32211     234445678889999888753 579999999999999


Q ss_pred             HHHHHhcC--CCCEEEEcCCCchhHHHHHHHcCC--------------EEEEecCCCCC-----CC--------CHHHHH
Q 014594          161 LIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGA--------------AVVKVPRKSDF-----SL--------NVELIA  211 (422)
Q Consensus       161 ~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~--------------~~~~v~~~~~~-----~~--------d~~~l~  211 (422)
                      .+++....  .+++|++..++|+.+...+...+.              .+..++....+     +.        +++.++
T Consensus       137 ~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  216 (451)
T 3oks_A          137 NAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAI  216 (451)
T ss_dssp             HHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHH
Confidence            99986653  448899999999876655443321              34555533110     12        244444


Q ss_pred             HHhhc----CCCeEEEEeCCCC-ccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEc
Q 014594          212 DAVER----EKPKCIFLTSPNN-PDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLR  279 (422)
Q Consensus       212 ~~i~~----~~~~~i~l~~p~N-PtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~  279 (422)
                      +.+.+    .++++|+ +.|.| ..|.+.+    .+++.++|+. |+++|+||+|.+|...+..  ....+...+++   
T Consensus       217 ~~l~~~~~~~~~aavi-~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~---  292 (451)
T 3oks_A          217 TVIDKQIGADNLAAVV-IEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLI---  292 (451)
T ss_dssp             HHHHHHTCGGGEEEEE-ECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---
T ss_pred             HHHHhhcCCCCEEEEE-EcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCCee---
Confidence            44431    3344554 55554 4556555    6777777776 9999999999988644322  22222223333   


Q ss_pred             cChhhhccccccceeeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594          280 TFSKRAGLAGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVP  353 (422)
Q Consensus       280 S~SK~~~~~G~r~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~  353 (422)
                      ||||.++ +|+|+||+++++++++.+...  ...|+.|+++++++.++|+.   +++.+ .++.....++.|.+.+++++
T Consensus       293 t~sK~l~-~G~~iG~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~  371 (451)
T 3oks_A          293 VTAKGIA-GGLPLSAVTGRAEIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDD  371 (451)
T ss_dssp             EECGGGG-TTSSCEEEEEEHHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             eehhhhh-CCcceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            8899998 599999999999998877643  34578899999999998863   33344 44444444555555555566


Q ss_pred             CCcccCCCceEEEEEeC-------CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          354 FLNPYPSYSNFILCEVT-------SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       354 ~~~~~p~~~~f~~~~~~-------~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .+...+..|.|+++++.       ...+..++.+.|+++||.++++..  .++++||+++...+.+++++++++|
T Consensus       372 ~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~~~~~~t~e~i~~~l~~l  444 (451)
T 3oks_A          372 RIGDVRGRGAMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGT--YGNVVRFLPPLSIGDDLLNEGLDVL  444 (451)
T ss_dssp             TEEEEEEETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECT--TSCEEEECCCTTCCHHHHHHHHHHH
T ss_pred             CeEEEEEeeEEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecCCC--CCCEEEEECCCCCCHHHHHHHHHHH
Confidence            54445667889999883       222467788999999999998753  2479999866432234455555443

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=99.96  E-value=9.6e-27  Score=227.52  Aligned_cols=274  Identities=16%  Similarity=0.146  Sum_probs=209.0

Q ss_pred             CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecCC
Q 014594          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRK  200 (422)
Q Consensus       125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~  200 (422)
                      +|+++...++++++++++|.+  +.++++++++++..++++++++||+|+++.|+|+.+...    ++..|++++.++. 
T Consensus        55 ~~~~~~~~~l~~~la~~~g~~--~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~-  131 (389)
T 3acz_A           55 RLGNPTVEQFEEMVCSIEGAA--GSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDT-  131 (389)
T ss_dssp             TTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECT-
T ss_pred             CCCChHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECC-
Confidence            456677889999999999975  566677788999999998899999999999999875544    5778999999985 


Q ss_pred             CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (422)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~  279 (422)
                          .|++++++.++ +++++|++++|+||||.+++.+++.++++. |+++|+||+|..+.... ..    ..+.++++.
T Consensus       132 ----~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~-~~----~~~~di~~~  201 (389)
T 3acz_A          132 ----SDVEKVKAAWK-PNTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLK-PL----ELGADIALH  201 (389)
T ss_dssp             ----TCHHHHHHTCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCC-GG----GTTCSEEEE
T ss_pred             ----CCHHHHHHhcC-CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccC-cc----ccCCeEEEE
Confidence                48999999997 689999999999999999999999999988 99999999998765422 21    245679999


Q ss_pred             cChhhhccccccc-eeeecCH-HHHHHHHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC
Q 014594          280 TFSKRAGLAGLRV-GYGAFPL-SIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF  354 (422)
Q Consensus       280 S~SK~~~~~G~r~-G~i~~~~-~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~  354 (422)
                      |+||.++.+|.|+ ||+++++ ++++.+.....  ..+.++..+.++...|+.   +. ..++..++.+.+.+.|++++.
T Consensus       202 S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~---l~~r~~~~~~~~~~l~~~l~~~~~  278 (389)
T 3acz_A          202 SVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMAPMDAFLCARGMKT---LPIRMQIHMENGLKVAKFLEQHEK  278 (389)
T ss_dssp             ETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             CChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCccH---HHHHHHHHHHHHHHHHHHHHcCCC
Confidence            9999999999998 9999998 89888876553  345677777777777753   23 455566677777777766532


Q ss_pred             Cc--------------cc----CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCC---------CC------------
Q 014594          355 LN--------------PY----PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYN---------NK------------  395 (422)
Q Consensus       355 ~~--------------~~----p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~---------~~------------  395 (422)
                      +.              +.    +..++++.+++++   .+++.+.|.+.||.++..+         .+            
T Consensus       279 v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~---~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~  355 (389)
T 3acz_A          279 IVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS---FEAAKKLMEHLKVCTLAVSLGCVDTLIEHPASMTHAAVPENI  355 (389)
T ss_dssp             EEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS---HHHHHHHHTTCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHH
T ss_pred             eeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC---HHHHHHHHHhCCCcEECcCCCCcccEeeCCcccccccCCHHH
Confidence            21              00    1236788888862   5666677778899887631         11            


Q ss_pred             -----CCCCeEEEEecChhhHHHHHHHH
Q 014594          396 -----ELKGYVRVSVGKPEHTDALMECL  418 (422)
Q Consensus       396 -----~~~~~iRis~~~~~~~~~l~~al  418 (422)
                           ..+++||||++..+ .+++.+.+
T Consensus       356 ~~~~g~~~~~iRlsvg~~~-~~~li~~l  382 (389)
T 3acz_A          356 MRKQGITPELVRISVGIEN-VDDIIADL  382 (389)
T ss_dssp             HHHHTCCTTEEEEECCSSC-HHHHHHHH
T ss_pred             HHhcCCCcCeEEEEeccCC-HHHHHHHH
Confidence                 11579999999753 34444443

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=99.96  E-value=1.1e-28  Score=242.03  Aligned_cols=315  Identities=16%  Similarity=0.118  Sum_probs=222.9

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-C-C-CCCCC-------CcchHHH----HHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-K-F-PYIYP-------DPESRRL----RAALAKDSGLESDHILVGCGADELID  160 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~-~~~y~-------~~~~~~l----r~~la~~~~~~~~~i~~~~G~~~al~  160 (422)
                      ..++++ .+.+++  ++++++++.+. . . ..+|+       .+...++    |+++++++|.+++.+++++| ++++.
T Consensus        24 ~~~~~~-~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~~~i~~~sG-t~a~~   99 (405)
T 2vi8_A           24 AKIELI-ASENFV--SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHANVQPHSG-AQANM   99 (405)
T ss_dssp             HSEECC-TTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSH-HHHHH
T ss_pred             cceeec-cCcccC--CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceEEEecCc-HHHHH
Confidence            344555 555666  79999999873 2 1 22222       1223344    46999999987555555666 99999


Q ss_pred             HHHHHhcCCCCEEEEcCCCchhHHH-H--HHHcC--CEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC
Q 014594          161 LIMRCVLDPGDKIVDCPPTFTMYEF-D--AAVNG--AAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (422)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~-~--~~~~g--~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~  234 (422)
                      .++++++++||+|+++.|+|+.+.. .  ....|  .+++.++.+ +++.+|++++++.+++.++++|++ +|+|. |..
T Consensus       100 ~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~-~~~~~-~~~  177 (405)
T 2vi8_A          100 AVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVA-AAAAY-PRI  177 (405)
T ss_dssp             HHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSC-CSC
T ss_pred             HHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEecccccccCCcCHHHHHHHHHhcCCeEEEE-eCCCC-Ccc
Confidence            9999999999999999999976632 1  11223  478888754 567899999999997447898887 44543 577


Q ss_pred             CCHHHHHHHHcC-CCeEEEccCCcccc-CCCchhhhhhcCCcEEEEccChhhhc-cccccceeeecCHHHHHHHHHhcCC
Q 014594          235 INDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAKQP  311 (422)
Q Consensus       235 ~~~e~l~~i~~~-~~~li~Deay~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~r~G~i~~~~~~~~~l~~~~~~  311 (422)
                      .+.+++.++|+. |+++|+||+|..+. ..+.....+.  ...++++|+||.++ +.|   ||+++++++++.+.....+
T Consensus       178 ~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~--~~di~~~s~sK~~~g~~g---G~~~~~~~~~~~l~~~~~~  252 (405)
T 2vi8_A          178 IDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVP--YAHFVTTTTHKTLRGPRG---GMILCQEQFAKQIDKAIFP  252 (405)
T ss_dssp             CCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTT--TCSEEEEESSSTTCCCSC---EEEEECHHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccc--cCCEEEEeccccCCCCCC---eEEEEcHHHHHHHHhhhcc
Confidence            789999999987 99999999998432 1111111111  22388999999986 555   9999999999888776544


Q ss_pred             CC---CcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccC-CCceEEEEEeCC-CCCHHHHHHHHH
Q 014594          312 YN---VSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYP-SYSNFILCEVTS-GMDAKKLKDDLA  383 (422)
Q Consensus       312 ~~---~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p-~~~~f~~~~~~~-~~~~~~~~~~L~  383 (422)
                      +.   .+.....++.++++.  .++++ .+++++++++++.+.|++++.....| ..++++|++++. +.+..++.+.|.
T Consensus       253 ~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  332 (405)
T 2vi8_A          253 GIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLD  332 (405)
T ss_dssp             TTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCCceEEEEEccCCCCCHHHHHHHHH
Confidence            32   344455555566653  35666 88999999999999999885322333 468899999974 457889999999


Q ss_pred             hCCcEEEeCCC------CCCCCeEEEEecC-------hhhHHHHHHHHhh
Q 014594          384 KMGVMIRHYNN------KELKGYVRVSVGK-------PEHTDALMECLMH  420 (422)
Q Consensus       384 ~~gI~v~~~~~------~~~~~~iRis~~~-------~~~~~~l~~al~~  420 (422)
                      ++||.++++..      ...++++||+++.       .++++++.++|++
T Consensus       333 ~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~  382 (405)
T 2vi8_A          333 EVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGL  382 (405)
T ss_dssp             HHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             HcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHH
Confidence            99999998752      2235789999984       6666666666654

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=99.96  E-value=1.2e-28  Score=243.73  Aligned_cols=312  Identities=19%  Similarity=0.108  Sum_probs=217.1

Q ss_pred             CCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (422)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~  165 (422)
                      .++..++||..|.  ++++ ++|++.+++.+ +..+  +.|+.+...++++.++++++ .+++|++++|+++++..+++.
T Consensus        49 ~~g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~ea~~~al~~  127 (424)
T 2e7u_A           49 ADGNRYLDYVMSWGPLILGHAHPKVLARVRETLERGLTFGAPSPLEVALAKKVKRAYP-FVDLVRFVNSGTEATMSALRL  127 (424)
T ss_dssp             TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSSCCHHHHHHHHHHHHHCT-TCCEEEEESSHHHHHHHHHHH
T ss_pred             CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHH
Confidence            4567789998875  5555 58999998876 3222  34565557889999999986 678999999999999999985


Q ss_pred             ---hcCCCCEEEEcCCCchhHHHHHHH--------------cCC------EEEEecCCCCCCCCHHHHHHHhhc--CCCe
Q 014594          166 ---VLDPGDKIVDCPPTFTMYEFDAAV--------------NGA------AVVKVPRKSDFSLNVELIADAVER--EKPK  220 (422)
Q Consensus       166 ---l~~~gd~Vl~~~p~y~~~~~~~~~--------------~g~------~~~~v~~~~~~~~d~~~l~~~i~~--~~~~  220 (422)
                         +.+ ++.|++.+|+|+.+...+..              .|.      .++.++.     .|++++++.+++  .+++
T Consensus       128 ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~  201 (424)
T 2e7u_A          128 ARGYTG-RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-----NDPEGLREVLKRRGEEIA  201 (424)
T ss_dssp             HHHHHC-CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-----TCHHHHHHHHHHHGGGEE
T ss_pred             HHHhhC-CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-----CCHHHHHHHHHhCCCCEE
Confidence               444 57899999999865432211              122      3455542     389999998863  3455


Q ss_pred             EEEEeCCCC-ccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCc-hhhhhhcCCcEEEEccChhhhccccccce
Q 014594          221 CIFLTSPNN-PDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVG  293 (422)
Q Consensus       221 ~i~l~~p~N-PtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~G~r~G  293 (422)
                      +|+ ++|+| +||.+.+    .+++.++ +. |+++|+||+|.+|..+.. .....+...++   .||||.++ +|+|+|
T Consensus       202 ~vi-~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di---~s~sK~l~-~G~~~G  275 (424)
T 2e7u_A          202 AII-FEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLAFGGATELLGLKPDL---VTLGKILG-GGLPAA  275 (424)
T ss_dssp             EEE-ECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSSTTHHHHHHTCCCSE---EEECGGGG-TTSSCE
T ss_pred             EEE-EeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccchhHHHHHhCCCcch---hhhhhhhh-CCcceE
Confidence            555 55655 4898886    6777777 66 999999999998832221 11222223333   38999999 699999


Q ss_pred             eeecCHHHHHHHHHh-----cCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccC----CCCcccCCCce
Q 014594          294 YGAFPLSIIEYLWRA-----KQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDV----PFLNPYPSYSN  363 (422)
Q Consensus       294 ~i~~~~~~~~~l~~~-----~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~  363 (422)
                      |+++++++++.+...     ..+|+.|++++.++.++|+..+..+ ..++++++++++.+.|+++    +.....++.|+
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~  355 (424)
T 2e7u_A          276 AYAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGS  355 (424)
T ss_dssp             EEEECHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETT
T ss_pred             EEEEcHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeece
Confidence            999999998877652     2346889999999988886422213 6667777778887777664    54333456788


Q ss_pred             EEEEEeCCC-------------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC-hhhHHHHHHHHhh
Q 014594          364 FILCEVTSG-------------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK-PEHTDALMECLMH  420 (422)
Q Consensus       364 f~~~~~~~~-------------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~-~~~~~~l~~al~~  420 (422)
                      |+|+++++.             .+..++.+.|.++||.++++..    ..+|+++.. .++++++.++|++
T Consensus       356 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----~~~~~~~~~t~~~i~~~l~~l~~  422 (424)
T 2e7u_A          356 MITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSNF----EAAFLSVAHREEDVEKTLEALRK  422 (424)
T ss_dssp             EEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSSS----SCEECCTTCCHHHHHHHHHHHHH
T ss_pred             EEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccCC----CceEeeccCCHHHHHHHHHHHHH
Confidence            999998641             1255788889999999998752    457777543 4445555555543

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=99.96  E-value=2.4e-28  Score=244.46  Aligned_cols=280  Identities=15%  Similarity=0.101  Sum_probs=210.0

Q ss_pred             hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE---EEEcCCCchhHH----HHHHHcCCEE-----EEec
Q 014594          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK---IVDCPPTFTMYE----FDAAVNGAAV-----VKVP  198 (422)
Q Consensus       131 ~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~---Vl~~~p~y~~~~----~~~~~~g~~~-----~~v~  198 (422)
                      ..++++++++++|.++++|++|+|+++++++++++++++||.   |+++.|+|+...    ..++..|+++     ..++
T Consensus       113 ~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~  192 (465)
T 3e9k_A          113 DESIVGLMKDIVGANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKP  192 (465)
T ss_dssp             THHHHGGGHHHHTCCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECC
T ss_pred             HHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEec
Confidence            467999999999999999999999999999999999877654   999999998643    3566789875     2345


Q ss_pred             CCCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcE
Q 014594          199 RKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNL  275 (422)
Q Consensus       199 ~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~  275 (422)
                      .++++.+|++++++++++  +++++|++++|+||||.+++.++|.++|+. |+++|+|++|.......    .+...+.+
T Consensus       193 ~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~----~~~~~~~D  268 (465)
T 3e9k_A          193 REGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVEL----YLHDWGVD  268 (465)
T ss_dssp             CTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCC----CHHHHTCC
T ss_pred             CCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCC----chhhcCCC
Confidence            566778999999999963  478999999999999999999999999987 99999999998533211    11123445


Q ss_pred             EEEccChhhhccccccceeeecCHHHHHHHHHhcC---------------------------CCCCcHHHHHHHHHHccC
Q 014594          276 IVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ---------------------------PYNVSVAAEVAACAALQN  328 (422)
Q Consensus       276 i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~---------------------------~~~~~~~~~~aa~~~L~~  328 (422)
                      +++.|++|.++.+..++|++++++++++.+.....                           ..+.+.....++.++++.
T Consensus       269 ~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~  348 (465)
T 3e9k_A          269 FACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEI  348 (465)
T ss_dssp             EEEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHH
T ss_pred             EEEECcccccccCCCceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHH
Confidence            88899999884223368999999887654431110                           114566666666666653


Q ss_pred             C-h-HHH-HHHHHHHHHHHHHHHHccC----------CCCccc-CC----CceEEEEEeCCCCCHHHHHHHHHhCCcEEE
Q 014594          329 P-I-YLE-VKEALIKERERLFKLLKDV----------PFLNPY-PS----YSNFILCEVTSGMDAKKLKDDLAKMGVMIR  390 (422)
Q Consensus       329 ~-~-~~~-~~~~~~~~~~~l~~~L~~~----------~~~~~~-p~----~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~  390 (422)
                      - + .++ ++++++++++++.+.|+++          +.+.+. |.    .+++++++++  .+..++.+.|.++||.++
T Consensus       349 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~--~~~~~l~~~L~~~Gi~v~  426 (465)
T 3e9k_A          349 FKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFS--VPNKDVFQELEKRGVVCD  426 (465)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEEC--CTTCCHHHHHHTTTEECE
T ss_pred             HHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEec--CCHHHHHHHHHHCCEEEe
Confidence            2 1 245 8889999999999999874          444443 33    3789999986  456789999999999998


Q ss_pred             eCCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014594          391 HYNNKELKGYVRVSVG----KPEHTDALMECLMH  420 (422)
Q Consensus       391 ~~~~~~~~~~iRis~~----~~~~~~~l~~al~~  420 (422)
                      ...    ++++||+++    +.++++++.++|++
T Consensus       427 ~~~----~~~iRis~~~~~~t~edi~~~~~~l~~  456 (465)
T 3e9k_A          427 KRN----PNGIRVAPVPLYNSFHDVYKFTNLLTS  456 (465)
T ss_dssp             EET----TTEEEEBCCTTTCCHHHHHHHHHHHHH
T ss_pred             cCC----CCEEEEeCcccCCCHHHHHHHHHHHHH
Confidence            543    589999983    45566666666654

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=99.96  E-value=7.7e-28  Score=236.24  Aligned_cols=278  Identities=16%  Similarity=0.160  Sum_probs=202.2

Q ss_pred             CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecC
Q 014594          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPR  199 (422)
Q Consensus       124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~  199 (422)
                      .+|++++..+||++++++++.+ +.|++++| ++++..+++ ++++||+|+++.|+|+.....    ++..|++++.++.
T Consensus        62 ~r~~~p~~~~l~~~la~~~g~~-~~i~~~sG-~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~  138 (403)
T 3cog_A           62 SRSGNPTRNCLEKAVAALDGAK-YCLAFASG-LAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDC  138 (403)
T ss_dssp             ----CHHHHHHHHHHHHHHTCS-EEEEESCH-HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECT
T ss_pred             cCCCCchHHHHHHHHHHHhCCC-cEEEECCH-HHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECC
Confidence            4578888899999999999975 66777666 589999999 899999999999999864332    3468999999985


Q ss_pred             CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-C-CeEEEccCCccccCCCchhhhhhcCCcEEE
Q 014594          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-P-ILVVLDEAYTEFSGLESRMEWVKKHDNLIV  277 (422)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~-~~li~Deay~~~~~~~~~~~~~~~~~~~i~  277 (422)
                      +     |+++++++++ +++++|++++|+||||.+++.+++.++++. | +++|+||+|..+.... ..    ..+.+++
T Consensus       139 ~-----d~~~l~~~i~-~~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~-~~----~~~~div  207 (403)
T 3cog_A          139 S-----KIKLLEAAIT-PETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQR-PL----ALGADIS  207 (403)
T ss_dssp             T-----SHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCC-TT----TTTCSEE
T ss_pred             C-----CHHHHHHhcC-cCCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCC-cc----ccCCeEE
Confidence            3     8999999997 689999999999999999999999999998 8 9999999999775422 11    1356799


Q ss_pred             EccChhhhcccc-ccceeeecC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccC
Q 014594          278 LRTFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDV  352 (422)
Q Consensus       278 ~~S~SK~~~~~G-~r~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~  352 (422)
                      +.|+||.++.+| .|+||++++ +++++.+......  ...+++.+.++...|+.   +. ..++..++...+.+.|++.
T Consensus       208 ~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~---l~~r~~~~~~n~~~l~~~l~~~  284 (403)
T 3cog_A          208 MYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT---LHVRMEKHFKNGMAVAQFLESN  284 (403)
T ss_dssp             EEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTC
T ss_pred             EEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH---HHHHHHHHHHHHHHHHHHHhcC
Confidence            999999998766 479999994 7888888765543  44688888888887764   23 4455556666666666544


Q ss_pred             C--------------CCcccC----CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeC---C----------C--C----
Q 014594          353 P--------------FLNPYP----SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHY---N----------N--K----  395 (422)
Q Consensus       353 ~--------------~~~~~p----~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~---~----------~--~----  395 (422)
                      +              ...+.+    ..+.++.+.+++  ..+++.+.|.+.||.++..   +          .  .    
T Consensus       285 ~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~--~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~  362 (403)
T 3cog_A          285 PWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKG--TLQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLK  362 (403)
T ss_dssp             TTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESS--CHHHHHHHHHHCSSSEECSCCSSSSCEEECTTTTTTTTSCH
T ss_pred             CCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecC--CHHHHHHHHHhCCcceEccCCCCcceeeecccccccccCCH
Confidence            2              111111    236677778863  2356666677889876532   1          0  0    


Q ss_pred             ------CC-CCeEEEEecCh---hhHHHHHHHHhh
Q 014594          396 ------EL-KGYVRVSVGKP---EHTDALMECLMH  420 (422)
Q Consensus       396 ------~~-~~~iRis~~~~---~~~~~l~~al~~  420 (422)
                            +. +++||||++..   +.+++|.++++.
T Consensus       363 ~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~  397 (403)
T 3cog_A          363 NDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKA  397 (403)
T ss_dssp             HHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence                  11 57999999863   334455555543

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=99.96  E-value=5e-29  Score=247.23  Aligned_cols=312  Identities=17%  Similarity=0.110  Sum_probs=218.9

Q ss_pred             CCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CCC--CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF--PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (422)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~--~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~  165 (422)
                      .++++++||..+.  ++++ .+|++.+++.+ +..  ...|+.+...++++.++++++ .+++|++++|++++++.+++.
T Consensus        53 ~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~~~v~~~~sgseA~~~al~~  131 (434)
T 2epj_A           53 VDGARIVDLVLAYGPLILGHKHPRVLEAVEEALARGWLYGAPGEAEVLLAEKILGYVK-RGGMIRFVNSGTEATMTAIRL  131 (434)
T ss_dssp             TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSSCCHHHHHHHHHHHHHHC-TTCEEEEESSHHHHHHHHHHH
T ss_pred             CCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHH
Confidence            4567789998876  4554 68999998876 322  244566667889999999996 578999999999999999986


Q ss_pred             ---hcCCCCEEEEcCCCchhHHHHHH--------------HcCC------EEEEecCCCCCCCCHHHHHHHhhc--CCCe
Q 014594          166 ---VLDPGDKIVDCPPTFTMYEFDAA--------------VNGA------AVVKVPRKSDFSLNVELIADAVER--EKPK  220 (422)
Q Consensus       166 ---l~~~gd~Vl~~~p~y~~~~~~~~--------------~~g~------~~~~v~~~~~~~~d~~~l~~~i~~--~~~~  220 (422)
                         +. +++.|++..|+|+.+...+.              ..|+      .++.++.     .|++++++.+++  ++++
T Consensus       132 ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~  205 (434)
T 2epj_A          132 ARGYT-GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-----NDVEALERVFAEYGDRIA  205 (434)
T ss_dssp             HHHHH-CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-----TCHHHHHHHHHHHGGGEE
T ss_pred             HHHhh-CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-----CCHHHHHHHHHhCCCCEE
Confidence               44 45788888899976433211              1232      3555553     389999999864  3677


Q ss_pred             EEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCc-hhhhhhcCCcEEEEccChhhhcccccccee
Q 014594          221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGY  294 (422)
Q Consensus       221 ~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~  294 (422)
                      +|+++..+|+||.+.+    .+++.++|+. |+++|+||+|.+|..+.. .....+...+   +.||||.++. |+|+||
T Consensus       206 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~d---i~s~sK~l~~-G~~~G~  281 (434)
T 2epj_A          206 GVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRLGLEGAQGYFNIEGD---IIVLGKIIGG-GFPVGA  281 (434)
T ss_dssp             EEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTSSTTHHHHHHTCCCS---EEEEEGGGGT-TSSCEE
T ss_pred             EEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeCCcchhhHHhCCCCC---eeeecchhcC-Ccceee
Confidence            7776666678999887    6667777776 999999999998732221 1122222233   3488999984 999999


Q ss_pred             eecCHHHHHHHHHh-----cCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccC----CCCcccCCCceE
Q 014594          295 GAFPLSIIEYLWRA-----KQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDV----PFLNPYPSYSNF  364 (422)
Q Consensus       295 i~~~~~~~~~l~~~-----~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~f  364 (422)
                      +++++++++.+...     ..+|+.|+++++++.++|+..+. + ..++++++++++.+.|+++    +.....++.|+|
T Consensus       282 v~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~  360 (434)
T 2epj_A          282 VAGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE-EPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESM  360 (434)
T ss_dssp             EEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH-SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred             eeecHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeE
Confidence            99999998877652     23467899999988888864221 2 6677777888888877764    543334567889


Q ss_pred             EEEEeCCC-------------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC-hhhHHHHHHHHh
Q 014594          365 ILCEVTSG-------------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK-PEHTDALMECLM  419 (422)
Q Consensus       365 ~~~~~~~~-------------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~-~~~~~~l~~al~  419 (422)
                      +|+++++.             .+..++.+.|.++||.++++..    ..+|+++.. .++++++.++|+
T Consensus       361 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----~~~~~~~~~t~e~i~~~l~~l~  425 (434)
T 2epj_A          361 MQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAPSNL----EAVFTGLPHQGEALEIAVEGLR  425 (434)
T ss_dssp             EEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT----SCEECCTTCSHHHHHHHHHHHH
T ss_pred             EEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEeccCC----CcEEEeccCCHHHHHHHHHHHH
Confidence            99999741             1356788999999999998752    457777543 444555555444

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=99.96  E-value=2.6e-27  Score=231.70  Aligned_cols=270  Identities=16%  Similarity=0.127  Sum_probs=210.0

Q ss_pred             CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEecCC
Q 014594          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRK  200 (422)
Q Consensus       125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~  200 (422)
                      +|+++...+++++++++++.+  ++++++|++++++.+++.++++||+|+++.|+|+.+...+    +..|.+++.++.+
T Consensus        62 r~~~~~~~~l~~~la~~~g~~--~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~  139 (392)
T 3qhx_A           62 RTGNPTRTALEAALAAVEDAA--FGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALA  139 (392)
T ss_dssp             TTCCHHHHHHHHHHHHHTTCS--EEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTT
T ss_pred             CCCChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCC
Confidence            346667889999999999964  7899999999999999999999999999999998766555    5579999999853


Q ss_pred             CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (422)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~  279 (422)
                           |+++++++++ +++++|++++|+||||.+.+.+++.++|+. |+++|+|++|..+.... ..    ..+.++++.
T Consensus       140 -----d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~~-~~----~~~~di~~~  208 (392)
T 3qhx_A          140 -----DLDAVRAAIR-PTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQQ-PL----SLGADVVLH  208 (392)
T ss_dssp             -----CHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCC-GG----GGTCSEEEE
T ss_pred             -----CHHHHHHhhC-CCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccCC-hH----HhCCcEEEE
Confidence                 8999999997 689999999999999999999999999997 99999999998553221 11    224458999


Q ss_pred             cChhhhcccc-ccceeeecC-HHHHHHHHHhcC--CCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC
Q 014594          280 TFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF  354 (422)
Q Consensus       280 S~SK~~~~~G-~r~G~i~~~-~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~  354 (422)
                      |+||.++.+| +|+||++++ +++.+.+.....  .+..++..+.++...++.   +. ..++..++.+.+.+.|++++.
T Consensus       209 S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~---l~~~~~~~~~~~~~l~~~L~~~~~  285 (392)
T 3qhx_A          209 STTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLKT---LVLRMQRHSENAAAVAEFLAEHPA  285 (392)
T ss_dssp             ETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred             cCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH---HHHHHHHHHHHHHHHHHHHhcCCC
Confidence            9999998777 799999997 688887766544  356788888877777754   33 666778888888899988754


Q ss_pred             Cc-c-cC----------------CCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCCC--------------------
Q 014594          355 LN-P-YP----------------SYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNNK--------------------  395 (422)
Q Consensus       355 ~~-~-~p----------------~~~~f~~~~~~~~-~~~~~~~~~L~~~gI~v~~~~~~--------------------  395 (422)
                      +. + +|                ..|.++++.++++ .+.+.+.+.|...|+.+..|+..                    
T Consensus       286 v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g  365 (392)
T 3qhx_A          286 ISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAESLGSVESLIEHPSAMTHASTAGSQLE  365 (392)
T ss_dssp             EEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSEECSCCCCSSCEEECGGGTSCGGGBTTBCC
T ss_pred             cceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCceECCCCCCCCceeeCcccccccccCHHHcC
Confidence            32 1 22                1267889999742 34566777776666666544420                    


Q ss_pred             CCCCeEEEEecChhh
Q 014594          396 ELKGYVRVSVGKPEH  410 (422)
Q Consensus       396 ~~~~~iRis~~~~~~  410 (422)
                      ..++.||||++.+..
T Consensus       366 ~~~~~iRlSvg~e~~  380 (392)
T 3qhx_A          366 VPDDLVRLSVGIEDV  380 (392)
T ss_dssp             CCTTEEEEECCSSCH
T ss_pred             CCCCeEEEEeccCCH
Confidence            135789999997643

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=99.96  E-value=8.7e-28  Score=236.75  Aligned_cols=316  Identities=14%  Similarity=0.119  Sum_probs=214.7

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhc-CCCC--CCCCC------cc-----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQ-LKFP--YIYPD------PE-----SRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~--~~y~~------~~-----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      +.+.+..+++.  .+|++.+++.+ +...  .+||.      ..     ....++.+++++++++++|++++| ++++..
T Consensus        31 ~~~~~~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~v~~~sG-s~a~~~  107 (420)
T 3gbx_A           31 EHIELIASENY--TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSG-SQANFA  107 (420)
T ss_dssp             HSEECCTTCCC--CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEEECCCSSH-HHHHHH
T ss_pred             cceeeeccCCC--CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCceeEecCc-HHHHHH
Confidence            34777777776  58999999976 3221  13322      11     123456888889988777777666 789999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHH---HHHHH--cCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYE---FDAAV--NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~--~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (422)
                      ++++++++||+|+++.|+|..+.   .....  .+...+.++.+.++.+|++++++++++.++++|++++|+||+  ..+
T Consensus       108 a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~~  185 (420)
T 3gbx_A          108 VYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG--VVD  185 (420)
T ss_dssp             HHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHHCCSEEEECCTTCCS--CCC
T ss_pred             HHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhcCCeEEEEecCccCC--ccC
Confidence            99999999999999999997632   11112  344666666667778999999999975579999999999874  788


Q ss_pred             HHHHHHHHcC-CCeEEEccCCcccc-CCCchhhhhhcCCcEEEEccChhhhccccccceeeecCH---HHHHHHHHhcCC
Q 014594          237 DEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL---SIIEYLWRAKQP  311 (422)
Q Consensus       237 ~e~l~~i~~~-~~~li~Deay~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~---~~~~~l~~~~~~  311 (422)
                      .+++.++|+. |+++|+||+|.... +.+......  ...++++.|+||.++  |.+.||+++++   ++.+.+.....+
T Consensus       186 l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~--~~~di~~~s~sK~~~--g~~gg~~~~~~~~~~~~~~~~~~~~~  261 (420)
T 3gbx_A          186 WAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPV--PHAHVVTTTTHKTLA--GPRGGLILAKGGDEELYKKLNSAVFP  261 (420)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCST--TTSSEEEEESSGGGC--SCSCEEEEESSCCHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHcCCEEEEECCcchhceecccCCccc--ccCCEEEeecccCCC--CCCceEEEEcCCcHHHHHHhhhhcCC
Confidence            9999999987 99999999986322 111111111  124488999999874  56679999987   788777665444


Q ss_pred             C---CCcHHHHHHHHHHcc-C-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccC-CCceEEEEEeCC-CCCHHHHHHHHH
Q 014594          312 Y---NVSVAAEVAACAALQ-N-PIYLE-VKEALIKERERLFKLLKDVPFLNPYP-SYSNFILCEVTS-GMDAKKLKDDLA  383 (422)
Q Consensus       312 ~---~~~~~~~~aa~~~L~-~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p-~~~~f~~~~~~~-~~~~~~~~~~L~  383 (422)
                      +   +.+...+.++..++. . .++.+ .+++++++++++.+.|++.++..+.+ ..++++|+.++. +.+.+.+.+.|.
T Consensus       262 ~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  341 (420)
T 3gbx_A          262 SAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEADAALG  341 (420)
T ss_dssp             ---CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHH
T ss_pred             CCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcCCeeccCCCCCeEEEEEcCCCCCCHHHHHHHHH
Confidence            2   333444444443332 2 34555 88899999999999998866433222 578899999864 567888888898


Q ss_pred             hCCcEEEeCC------CCCCCCeEEEEecC-------hhhHHHHHHHHhh
Q 014594          384 KMGVMIRHYN------NKELKGYVRVSVGK-------PEHTDALMECLMH  420 (422)
Q Consensus       384 ~~gI~v~~~~------~~~~~~~iRis~~~-------~~~~~~l~~al~~  420 (422)
                      ++||.+++..      .+...+.+||++..       .++++++.+++++
T Consensus       342 ~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~  391 (420)
T 3gbx_A          342 RANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCD  391 (420)
T ss_dssp             HTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             HCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHH
Confidence            9999999822      12234569999852       4556666666554

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=99.96  E-value=2.7e-27  Score=236.00  Aligned_cols=309  Identities=14%  Similarity=0.035  Sum_probs=223.6

Q ss_pred             CCCHHHHHHHhc-CCC-CCCC-CCcch----HHHHHHHHHHcCCCCCC-----EEEeCCHHHHHHHHHHHhcC-------
Q 014594          108 GPPPEVREALGQ-LKF-PYIY-PDPES----RRLRAALAKDSGLESDH-----ILVGCGADELIDLIMRCVLD-------  168 (422)
Q Consensus       108 ~~~~~v~~al~~-~~~-~~~y-~~~~~----~~lr~~la~~~~~~~~~-----i~~~~G~~~al~~~~~~l~~-------  168 (422)
                      .+++.+.+++.+ +.. ...| ..++.    .++++.+++++|++.++     +++|+|+++++..++.++.+       
T Consensus        53 ~~~~~v~e~~~~a~~~~~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~  132 (452)
T 2dgk_A           53 WDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRME  132 (452)
T ss_dssp             CCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHhccCCCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHH
Confidence            345788888875 322 1223 23343    35666678888987765     99999999999999887754       


Q ss_pred             -CC-----CEEEEcCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHH
Q 014594          169 -PG-----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (422)
Q Consensus       169 -~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~  241 (422)
                       +|     ++|+++. +|..+...++..|++++.++.++ ++.+|+++|+++++ +++++|++++|+||||.+.+.++|.
T Consensus       133 ~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~-~~t~~v~~~~~~n~tG~~~~l~~I~  210 (452)
T 2dgk_A          133 AAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACD-ENTIGVVPTFGVTYTGNYEFPQPLH  210 (452)
T ss_dssp             HTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCC-TTEEEEECBBSCTTTCBBCCHHHHH
T ss_pred             hcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCCCCCeECHHHHHHHHh-hCCEEEEEEcCCcCCcccCCHHHHH
Confidence             55     5899999 99999999999999999999765 68999999999997 6899999999999999999999999


Q ss_pred             HHHcC-------CCeEEEccCCccccC---CCchhhhhhcCCcEEEEccChhhhccccccceeeecCH-HHH-HHHHHhc
Q 014594          242 KILEM-------PILVVLDEAYTEFSG---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SII-EYLWRAK  309 (422)
Q Consensus       242 ~i~~~-------~~~li~Deay~~~~~---~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~-~~l~~~~  309 (422)
                      ++++.       ++++++|++|..+..   .+.....+...+.+.++.|++| |+++|.++||+++++ +++ +.+....
T Consensus       211 ~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK-~~~~~~~~G~~~~~~~~~~~~~~~~~~  289 (452)
T 2dgk_A          211 DALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHK-FGLAPLGCGWVIWRDEEALPQELVFNV  289 (452)
T ss_dssp             HHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTT-TTCCCSSCEEEEESSGGGSCGGGCEEE
T ss_pred             HHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECccc-ccCCCCCeEEEEEcCHHHHHHHhccCc
Confidence            99976       899999999997642   1111111112234567788899 777899999999964 333 3331111


Q ss_pred             CC-----------CCC---cHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCccc-C----CCceEEEEEe
Q 014594          310 QP-----------YNV---SVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPY-P----SYSNFILCEV  369 (422)
Q Consensus       310 ~~-----------~~~---~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p----~~~~f~~~~~  369 (422)
                      ..           ++.   ..+.+.++...+.. +.++ +.+++.++++++.+.|++++.+.+. |    ...+++.+++
T Consensus       290 ~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~  368 (452)
T 2dgk_A          290 DYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGR-EGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKL  368 (452)
T ss_dssp             CCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEE
T ss_pred             cccCCCCCCcccCCCChhHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEe
Confidence            10           111   34455566665544 3344 8888999999999999998755543 3    4567888888


Q ss_pred             CCC----CCHHHHHHHHHhCCcEEEeCCCC---CCCCeEEEEecC---hhhHHHHHHHHhh
Q 014594          370 TSG----MDAKKLKDDLAKMGVMIRHYNNK---ELKGYVRVSVGK---PEHTDALMECLMH  420 (422)
Q Consensus       370 ~~~----~~~~~~~~~L~~~gI~v~~~~~~---~~~~~iRis~~~---~~~~~~l~~al~~  420 (422)
                      ++.    .+..++.+.|.++||.++.+..+   ...+++||+++.   .++++++.++|++
T Consensus       369 ~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~  429 (452)
T 2dgk_A          369 KDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKA  429 (452)
T ss_dssp             CTTCCCSCCHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             cCcccccCCHHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHH
Confidence            642    35689999999999976543221   235699999985   4667777777754

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=99.96  E-value=4.8e-28  Score=245.35  Aligned_cols=281  Identities=14%  Similarity=0.092  Sum_probs=213.1

Q ss_pred             HHHHHHHHHcCCCC--CCE--EEeCCHHHHHHHHHHHhcCCC--------CEEEEcCCCchhHHHHHHHcCCEEEEecCC
Q 014594          133 RLRAALAKDSGLES--DHI--LVGCGADELIDLIMRCVLDPG--------DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK  200 (422)
Q Consensus       133 ~lr~~la~~~~~~~--~~i--~~~~G~~~al~~~~~~l~~~g--------d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~  200 (422)
                      ++++++++++|.++  +++  ++|+|+++++..+++++.++|        |+|+++.|+|..+...++..|++++.++.+
T Consensus       143 ~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~  222 (514)
T 3mad_A          143 EVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLD  222 (514)
T ss_dssp             HHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHHHHHTCEEEEECBC
T ss_pred             HHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHHHHcCCeeEEeeeC
Confidence            45666688888764  678  999999999999999988776        899999999999999999999999999987


Q ss_pred             CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCC-----Cc--hhhhhhcC
Q 014594          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-----ES--RMEWVKKH  272 (422)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~-----~~--~~~~~~~~  272 (422)
                      +++.+|+++|+++++ .++++|++++|+||||.+.+.++|.+||+. |+++|+||+|.+|...     +.  ........
T Consensus       223 ~~~~~d~~~Le~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~  301 (514)
T 3mad_A          223 ADYRADVAAMREAIT-PNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLE  301 (514)
T ss_dssp             TTSCBCHHHHHHHCC-TTEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTST
T ss_pred             CCCCCCHHHHHHHhc-cCCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcccccCC
Confidence            788999999999997 689999999999999999999999999988 9999999999976531     00  00111223


Q ss_pred             CcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC-------------CCCCcH---HHHHHHHHHccCChHHH-HH
Q 014594          273 DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-------------PYNVSV---AAEVAACAALQNPIYLE-VK  335 (422)
Q Consensus       273 ~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~-------------~~~~~~---~~~~aa~~~L~~~~~~~-~~  335 (422)
                      +.++++.|++|.+ .+|.++|+++++++..........             ..+.+.   .++.++...+.. .+++ ..
T Consensus       302 g~d~~~~s~~K~l-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~-~~~~~~~  379 (514)
T 3mad_A          302 GVTSVSADTHKYG-YGAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGE-EGYLDAT  379 (514)
T ss_dssp             TCCEEEECTTTTT-CCCSSCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred             CCcEEEECchhcc-CCCCCeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhH-HHHHHHH
Confidence            4568889999965 477899999987766543221110             112222   344444444433 3344 88


Q ss_pred             HHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec----ChhhH
Q 014594          336 EALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG----KPEHT  411 (422)
Q Consensus       336 ~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~----~~~~~  411 (422)
                      +++.++++++.+.|++++.+.+.....+++++..+ +.+..++.+.|.++||.+...   ..++++|++++    ..+++
T Consensus       380 ~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~Gi~v~g~---~~~~~~Ri~~~~~~~~~e~i  455 (514)
T 3mad_A          380 RRILQAADRLKAGVRAIPSLKILGDPLWVIAVASD-ELNIYQVMEEMAGRGWRLNGL---HRPPAFHVALTLRHTEPGVV  455 (514)
T ss_dssp             HHHHHHHHHHHHHHHTSTTCEESSCCSSEEEEECS-SSCHHHHHHHHHTTTCBCEEE---TTTTEEEEECCGGGGSTTHH
T ss_pred             HHHHHHHHHHHHHHhhCCCeEEeCCCeEEEEEeCC-CCCHHHHHHHHHhcCCEeccC---CCCCeEEEEEecCCCCHHHH
Confidence            88999999999999998666654444567788764 568899999999999988432   23578999987    23556


Q ss_pred             HHHHHHHhh
Q 014594          412 DALMECLMH  420 (422)
Q Consensus       412 ~~l~~al~~  420 (422)
                      +++.++|++
T Consensus       456 ~~~l~~L~~  464 (514)
T 3mad_A          456 DRFLADLQD  464 (514)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            666666553

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=99.96  E-value=6.2e-28  Score=239.02  Aligned_cols=320  Identities=15%  Similarity=0.091  Sum_probs=212.0

Q ss_pred             CCCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~  164 (422)
                      +.++++++|+..+.  ++++ .+|++.+++.+ +...  ..||++...+|+++++++++ .+++|++++|++++++.+++
T Consensus        49 d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGsea~~~al~  127 (429)
T 4e77_A           49 DVDGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFGAPTEMEVKMAQLVTDLVP-TMDMVRMVNSGTEATMSAIR  127 (429)
T ss_dssp             ETTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHH
T ss_pred             ECCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcccCCCCHHHHHHHHHHHhhCC-CCCEEEEeCcHHHHHHHHHH
Confidence            34577899998875  4555 57999999876 3322  34677778899999999997 67899999999999999998


Q ss_pred             Hhc--CCCCEEEEcCCCchhHHHHHHH-c--CCEEEEecCCCCC------------CCCHHHHHHHhhc--CCCeEEEEe
Q 014594          165 CVL--DPGDKIVDCPPTFTMYEFDAAV-N--GAAVVKVPRKSDF------------SLNVELIADAVER--EKPKCIFLT  225 (422)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~-~--g~~~~~v~~~~~~------------~~d~~~l~~~i~~--~~~~~i~l~  225 (422)
                      ...  ..++.|++..+.|+.+...+.. .  +......+...+.            ..|++++++.+++  +++++|+++
T Consensus       128 ~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~e  207 (429)
T 4e77_A          128 LARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVACIIVE  207 (429)
T ss_dssp             HHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEEEEC
T ss_pred             HHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCCEEEEEEC
Confidence            543  3567899999999765542211 1  1111111111110            1289999999874  345555544


Q ss_pred             CCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceeeecC
Q 014594          226 SPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (422)
Q Consensus       226 ~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~  298 (422)
                      ..++++|.+.+    .+++.++|+. |+++|+||+|.+| ..+..  ....+...+   +.||||.++ +|+|+||++++
T Consensus       208 p~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~~pd---i~t~sK~~~-~G~~~G~~~~~  282 (429)
T 4e77_A          208 PVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGAQDYYHVIPD---LTCLGKIIG-GGMPVGAFGGR  282 (429)
T ss_dssp             SSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTCCCS---EEEEEGGGG-TTSCCEEEEEC
T ss_pred             CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchHHHhcCCCCC---eeeeccccc-CCCCeEEEEEC
Confidence            44455666666    7888888887 9999999999988 43321  222222233   348899998 89999999999


Q ss_pred             HHHHHHHHH-----hcCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEe
Q 014594          299 LSIIEYLWR-----AKQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEV  369 (422)
Q Consensus       299 ~~~~~~l~~-----~~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~  369 (422)
                      +++++.+..     ...+|+.+++++.++.++|+   ++++.+ .++.....++.|.+.+.+++.....+..++|+++++
T Consensus       283 ~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~  362 (429)
T 4e77_A          283 REVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEENIPLVVNHVGGMFGLFF  362 (429)
T ss_dssp             HHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEEC
T ss_pred             HHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEEE
Confidence            999988764     23357889999999988886   334444 444444444444444444565444566788999998


Q ss_pred             CCCC--------------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHhh
Q 014594          370 TSGM--------------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLMH  420 (422)
Q Consensus       370 ~~~~--------------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~~  420 (422)
                      ++..              +..++.+.|+++||.++++.    ...+|+++. +.++++++.++|++
T Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~~~~~~~~t~e~i~~~l~~l~~  424 (429)
T 4e77_A          363 TNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLAPSA----FEAGFMSLAHSNEDIQKTVNAARR  424 (429)
T ss_dssp             CSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECCSST----TSCEECCTTCCHHHHHHHHHHHHH
T ss_pred             ccCcccccccccccccHHHHHHHHHHHHHCCeEEeecC----CCCEEEeccCCHHHHHHHHHHHHH
Confidence            7431              12788899999999999875    245777654 44455555555543

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=99.96  E-value=7e-27  Score=230.63  Aligned_cols=303  Identities=15%  Similarity=0.131  Sum_probs=220.4

Q ss_pred             CCCCCC-CHHHHHHHhcC-C-CC-CCCCC-cc----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEE
Q 014594          104 ENPYGP-PPEVREALGQL-K-FP-YIYPD-PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKI  173 (422)
Q Consensus       104 ~~~~~~-~~~v~~al~~~-~-~~-~~y~~-~~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~V  173 (422)
                      .+.+++ ++++.+++.+. . .. ..|+. .|    ..++++.+++++|++  ++++++|+++++..+++++ +++||+|
T Consensus         8 ~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~--~~i~~~~gt~al~~~~~~~~~~~gd~V   85 (418)
T 2c81_A            8 WPEWPQHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGVP--YCVPTTSGSTALMLALEALGIGEGDEV   85 (418)
T ss_dssp             CCCSSCCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCCTTCEE
T ss_pred             CCCCCCCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCCCcCEE
Confidence            344443 68888887652 1 11 22532 23    678999999999975  5677777899999999999 8999999


Q ss_pred             EEcCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEE
Q 014594          174 VDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVV  251 (422)
Q Consensus       174 l~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li  251 (422)
                      +++.|+|..+...++..|++++.++.+. ++.+|++++++.++ +++++|+++   ||||...+.+++.++++. |+++|
T Consensus        86 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~~~---~~~G~~~~~~~i~~~~~~~~~~li  161 (418)
T 2c81_A           86 IVPSLTWIATATAVLNVNALPVFVDVEADTYCIDPQLIKSAIT-DKTKAIIPV---HLFGSMANMDEINEIAQEHNLFVI  161 (418)
T ss_dssp             EEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCC-TTEEEECCB---CCTTCCCCHHHHHHHHHHTTCEEE
T ss_pred             EECCCccHhHHHHHHHcCCEEEEEecCCCCCCcCHHHHHHhhC-CCCeEEEEe---CCcCCcccHHHHHHHHHHCCCEEE
Confidence            9999999999999999999999999764 68899999999997 688998854   589999999999999987 99999


Q ss_pred             EccCCcccc-CCCchhhhhhcCCcEEEEccC--hhhhccccccceeeec-CHHHHHHHHHhcCC--------------CC
Q 014594          252 LDEAYTEFS-GLESRMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAF-PLSIIEYLWRAKQP--------------YN  313 (422)
Q Consensus       252 ~Deay~~~~-~~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~~--------------~~  313 (422)
                      +||+|..+. +++......   . .+.+.||  ||.++. | |+||+++ ++++++.+......              +.
T Consensus       162 ~D~a~~~~~~~~~~~~~~~---~-~~~~~s~s~~K~~~~-g-~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (418)
T 2c81_A          162 EDCAQSHGSVWNNQRAGTI---G-DIGAFSCQQGKVLTA-G-EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDM  235 (418)
T ss_dssp             EECTTCTTCEETTEETTSS---S-SEEEEECCTTSSSCS-S-SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCB
T ss_pred             EECcccccCccCCEecccc---c-ceEEEeccCCcccCC-C-CeEEEEECCHHHHHHHHHHHHhCccccccccccccchh
Confidence            999999875 333222111   2 2677777  999986 8 9999999 47888877654322              11


Q ss_pred             --------------CcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCccc-CCCc--e---EEE-EEeCC
Q 014594          314 --------------VSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPY-PSYS--N---FIL-CEVTS  371 (422)
Q Consensus       314 --------------~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~--~---f~~-~~~~~  371 (422)
                                    ++.+........+   ++++ ..++.+++++++.+.|++++.+.+. +..+  .   +++ +.+++
T Consensus       236 ~~~~~~~~~g~~~~~~~~~aa~~~~~l---~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  312 (418)
T 2c81_A          236 QLVKKGDIQGSNYCLSEFQSAILLDQL---QELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDP  312 (418)
T ss_dssp             SEEECCSSCCCBCCCCHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECG
T ss_pred             hccccccccCcCCCcCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEcc
Confidence                          1111111111222   2344 6777788899999999988655543 3332  2   233 77764


Q ss_pred             ----CCCHHHHHHHHHhC-CcE---EEeCCCC-----------------------------CC-------CCeEEEEe--
Q 014594          372 ----GMDAKKLKDDLAKM-GVM---IRHYNNK-----------------------------EL-------KGYVRVSV--  405 (422)
Q Consensus       372 ----~~~~~~~~~~L~~~-gI~---v~~~~~~-----------------------------~~-------~~~iRis~--  405 (422)
                          +.+.+++.+.|.++ ||.   ++++..+                             ..       .+.+||++  
T Consensus       313 ~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~  392 (418)
T 2c81_A          313 VKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAI  392 (418)
T ss_dssp             GGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGG
T ss_pred             ccccccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCCc
Confidence                56889999999988 999   8876421                             01       15899998  


Q ss_pred             --cChhhHHHHHHHHhhh
Q 014594          406 --GKPEHTDALMECLMHL  421 (422)
Q Consensus       406 --~~~~~~~~l~~al~~l  421 (422)
                        ++.++++++.++++.+
T Consensus       393 ~~gt~edi~~~~~~l~~~  410 (418)
T 2c81_A          393 LLAEPSHLSLLVDAVAEL  410 (418)
T ss_dssp             GGSCHHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHH
Confidence              4777888888887653

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.96  E-value=2.8e-28  Score=238.46  Aligned_cols=311  Identities=14%  Similarity=0.111  Sum_probs=221.7

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCC--CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCC
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQLKFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGD  171 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y--~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd  171 (422)
                      .+++++..+.++++  +++.+++.+......|  +.++..++|++++++++.+  ++++++|+++++..+++++ +++||
T Consensus        22 ~~~~~l~~~~p~~~--~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~i~~~~gt~al~~~l~~~~~~~gd   97 (391)
T 3dr4_A           22 SDLPRISVAAPRLD--GNERDYVLECMDTTWISSVGRFIVEFEKAFADYCGVK--HAIACNNGTTALHLALVAMGIGPGD   97 (391)
T ss_dssp             ------CCCCCCCC--SSHHHHHHHHHHHTCCSSCSHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHTCCTTC
T ss_pred             CCCceeccCCCCCC--HHHHHHHHHHHHcCCccCCChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCCCcC
Confidence            45678888887664  5667777653111234  4567899999999999965  8899999999999999999 89999


Q ss_pred             EEEEcCCCchhHHHHHHHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCe
Q 014594          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PIL  249 (422)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~  249 (422)
                      +|+++.|+|..+...++..|++++.++.+ +++.+|++++++.++ +++++|+   |+||||...+.+++.++++. |++
T Consensus        98 ~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~---~~n~tG~~~~~~~i~~l~~~~~~~  173 (391)
T 3dr4_A           98 EVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALIT-PRTKAIM---PVHLYGQICDMDPILEVARRHNLL  173 (391)
T ss_dssp             EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGSGGGCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCE
T ss_pred             EEEECCCchHHHHHHHHHCCCEEEEEecCccccCcCHHHHHHhcC-CCceEEE---EECCCCChhhHHHHHHHHHHcCCE
Confidence            99999999999999999999999999976 568899999999997 6888888   67899999999999999987 999


Q ss_pred             EEEccCCcccc-CCCchhhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcCC----------------
Q 014594          250 VVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP----------------  311 (422)
Q Consensus       250 li~Deay~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~----------------  311 (422)
                      +|+|++|..+. +.+......   . .+.+.||||..+++|.+.|+++++ +++.+.+......                
T Consensus       174 li~D~a~~~g~~~~~~~~~~~---~-di~~~S~s~~K~l~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~  249 (391)
T 3dr4_A          174 VIEDAAEAVGATYRGKKSGSL---G-DCATFSFFGNAIITTGEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFN  249 (391)
T ss_dssp             EEEECTTCTTCEETTEETTSS---S-SEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCB
T ss_pred             EEEECcccccceECCeeeccc---C-CEEEEECCCCCcCCcCCeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccc
Confidence            99999998643 222211111   1 267778773333455678998875 5577766544311                


Q ss_pred             CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC-------Cc-eEEEEEeCC--CCCHHHHHH
Q 014594          312 YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPS-------YS-NFILCEVTS--GMDAKKLKD  380 (422)
Q Consensus       312 ~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~-------~~-~f~~~~~~~--~~~~~~~~~  380 (422)
                      +..+.+...++...+   +.++ ..++.+++++++.+.|++++ +.+.+.       .. ..+++.+++  +.+.+++.+
T Consensus       250 ~~~~~l~aa~~~~~~---~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~  325 (391)
T 3dr4_A          250 YRMTNIQAAIGLAQL---ERVDEHLAARERVVGWYEQKLARLG-NRVTKPHVALTGRHVFWMYTVRLGEGLSTTRDQVIK  325 (391)
T ss_dssp             CBCCHHHHHHHHHHH---HTHHHHHHHHHHHHHHHHHHHGGGT-TSEECCCCCTTSCCCCSSEEEEECSSCSSCHHHHHH
T ss_pred             cCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhhcCC-ccccCcCCCCCCcceeEEEEEEECCccchhHHHHHH
Confidence            233444443333333   2334 67778888889999998874 332222       12 235777775  678999999


Q ss_pred             HHHhCCcEEEeCCCC-------------C-------CCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          381 DLAKMGVMIRHYNNK-------------E-------LKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       381 ~L~~~gI~v~~~~~~-------------~-------~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      .|.++||.++++..+             .       ..+.+||++.   +.++++++.++|+++
T Consensus       326 ~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~  389 (391)
T 3dr4_A          326 DLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQV  389 (391)
T ss_dssp             HHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTT
T ss_pred             HHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence            999999999987521             0       1357999976   466677777777653

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=99.96  E-value=4.1e-27  Score=232.25  Aligned_cols=316  Identities=14%  Similarity=0.138  Sum_probs=211.5

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCC------Ccc----hHH-HHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQ-LK--FPYIYP------DPE----SRR-LRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~------~~~----~~~-lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      +.++|..++++.  +|++.+++.+ +.  +..+|+      ...    ..+ .++.++++++.+.. .++++|+++++..
T Consensus        33 ~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~v~~~~Gs~a~~~  109 (425)
T 3ecd_A           33 SQVELIASENIV--SRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFNAGHA-NVQPHSGAQANGA  109 (425)
T ss_dssp             HSEECCTTCCCC--CHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHTCSEE-ECCCSSHHHHHHH
T ss_pred             cceeeecccCCC--CHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhCCCCc-eeecCchHHHHHH
Confidence            458998888877  7999999986 32  112222      111    122 34667788887542 3458888899999


Q ss_pred             HHHHhcCCCCEEEEcCCCchh---HHHHHHHcCC--EEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594          162 IMRCVLDPGDKIVDCPPTFTM---YEFDAAVNGA--AVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~---~~~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (422)
                      ++++++++||+|+++.|+|+.   +.......|.  +++.++.+ +++.+|++++++.+.++++++|++++|+||  ...
T Consensus       110 al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~--~~~  187 (425)
T 3ecd_A          110 VMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAYP--RKL  187 (425)
T ss_dssp             HHHHHCCTTCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEEECSCCC--SCC
T ss_pred             HHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhcCCcEEEEccccCC--CcC
Confidence            999999999999999999976   2222223444  55666644 457899999999997568999999999995  577


Q ss_pred             CHHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcCCC
Q 014594          236 NDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQPY  312 (422)
Q Consensus       236 ~~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~~  312 (422)
                      +.+++.++|+. |+++|+||+|.. +.+.+........  ..+++.|+||.+  +|.|+||++++ +++.+.+.......
T Consensus       188 ~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~--~di~~~s~sK~l--~g~~~g~~~~~~~~~~~~~~~~~~~~  263 (425)
T 3ecd_A          188 DFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEH--AHVVTSTTHKTL--RGPRGGFVLTNDEEIAKKINSAVFPG  263 (425)
T ss_dssp             CHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT--CSEEEEESSGGG--CCCSCEEEEESCHHHHHHHHHHHC--
T ss_pred             CHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhc--CcEEEecCCccc--CCCCcEEEEeCCHHHHHHHHhhhCcc
Confidence            88999999987 999999999643 2222221111211  238899999986  67899999998 57777776654442


Q ss_pred             ---CCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCccc-CCCceEEEEEeCC-CCCHHHHHHHHHh
Q 014594          313 ---NVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPY-PSYSNFILCEVTS-GMDAKKLKDDLAK  384 (422)
Q Consensus       313 ---~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~f~~~~~~~-~~~~~~~~~~L~~  384 (422)
                         +.+...+.++..++..  .++.+ .+++++++++++.+.|++.++.... +..++++|+.+++ +.+.+.+.+.|.+
T Consensus       264 ~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  343 (425)
T 3ecd_A          264 LQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALER  343 (425)
T ss_dssp             ---CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHH
T ss_pred             ccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCceEEEEEeCCCCCCHHHHHHHHHH
Confidence               3444444444444432  34555 8888999999999999987643333 2567889999864 5578888899999


Q ss_pred             CCcEEEeCCC------CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014594          385 MGVMIRHYNN------KELKGYVRVSVG-------KPEHTDALMECLMH  420 (422)
Q Consensus       385 ~gI~v~~~~~------~~~~~~iRis~~-------~~~~~~~l~~al~~  420 (422)
                      +||.++++..      ....+++|+++.       ..++++++.+++++
T Consensus       344 ~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~  392 (425)
T 3ecd_A          344 AGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILE  392 (425)
T ss_dssp             TTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             cCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHH
Confidence            9999994432      223468999954       24566666666654

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=99.96  E-value=1e-27  Score=237.38  Aligned_cols=277  Identities=17%  Similarity=0.214  Sum_probs=205.3

Q ss_pred             CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecCCCC
Q 014594          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSD  202 (422)
Q Consensus       127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~  202 (422)
                      +++...++|+++++++|.+ +.|++++|+ ++++.++++++++||+|+++.|.|..+...    ++..|++++.++.+  
T Consensus       112 ~~~~~~~l~~~lA~l~g~~-~~v~~~sG~-~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~--  187 (445)
T 1qgn_A          112 GNPTTVVLEEKISALEGAE-STLLMASGM-CASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPA--  187 (445)
T ss_dssp             CCHHHHHHHHHHHHHHTCS-EEEEESCHH-HHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSS--
T ss_pred             CChHHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC--
Confidence            4556779999999999975 556665555 999999999999999999999999876553    44579999999853  


Q ss_pred             CCCCHHHHHHHhhcCCC-eEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEcc
Q 014594          203 FSLNVELIADAVEREKP-KCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT  280 (422)
Q Consensus       203 ~~~d~~~l~~~i~~~~~-~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S  280 (422)
                         |+++++++++ +++ ++|++++|+||||.+.+.+++.++++. |+++|+|++|..+.... .   . ..+.++++.|
T Consensus       188 ---d~~~l~~ai~-~~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~-~---~-~~g~Div~~S  258 (445)
T 1qgn_A          188 ---DVGALELALN-QKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQK-A---L-ALGADLVLHS  258 (445)
T ss_dssp             ---CHHHHHHHHH-HSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCC-T---T-TTTCSEEEEC
T ss_pred             ---CHHHHHHHhc-cCCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCC-c---c-ccCCEEEEEC
Confidence               8999999997 578 999999999999999999999999987 99999999998543211 1   1 2345689999


Q ss_pred             Chhhhcccc-ccceeeecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC-
Q 014594          281 FSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFL-  355 (422)
Q Consensus       281 ~SK~~~~~G-~r~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~-  355 (422)
                      +||.+|..| .++||+++++++++.+......  ...+++...++...++   .+. ..+++.++++++.+.|++++.+ 
T Consensus       259 ~sK~~gg~gd~~~G~l~~~~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~---~l~~r~~~~~~~a~~l~~~L~~~p~v~  335 (445)
T 1qgn_A          259 ATKFLGGHNDVLAGCISGPLKLVSEIRNLHHILGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAEILEAHPKVR  335 (445)
T ss_dssp             TTTTTTCSSSCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGG---GHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred             CcccccccccceEEEEEECHHHHHHHHHHHHHhCCCCCHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence            999988554 4799999999998888765443  2346665555555553   344 5666777889999999888654 


Q ss_pred             cc-cC----------------CCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCCC----------------------
Q 014594          356 NP-YP----------------SYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNNK----------------------  395 (422)
Q Consensus       356 ~~-~p----------------~~~~f~~~~~~~~-~~~~~~~~~L~~~gI~v~~~~~~----------------------  395 (422)
                      .+ +|                ..++++++.++++ .+...+.+.|...++.++.|+..                      
T Consensus       336 ~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~  415 (445)
T 1qgn_A          336 HVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKY  415 (445)
T ss_dssp             EEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTT
T ss_pred             EEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHhc
Confidence            22 33                2577889999742 12444555554345655544321                      


Q ss_pred             C-CCCeEEEEecChhhHHHHHHHHhh
Q 014594          396 E-LKGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       396 ~-~~~~iRis~~~~~~~~~l~~al~~  420 (422)
                      + .++.||||++.+ +.++|.+.|++
T Consensus       416 g~~~~~iRlSvG~E-did~li~~L~~  440 (445)
T 1qgn_A          416 GIMDNLVRFSFGVE-DFDDLKADILQ  440 (445)
T ss_dssp             TCCSSEEEEECCSS-CHHHHHHHHHH
T ss_pred             CCCCCeEEEEeccC-CHHHHHHHHHH
Confidence            1 247999999964 57888877765

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=99.96  E-value=8.3e-28  Score=241.00  Aligned_cols=320  Identities=15%  Similarity=0.123  Sum_probs=222.9

Q ss_pred             CCCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-C---CCCC--CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-L---KFPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~---~~~~--~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      +.+++++||+.+|  .+.++ .+|++.+++.+ +   .+..  .|+.+...+|.++++++++.+.++|++++|+++|++.
T Consensus        50 d~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~  129 (476)
T 3i5t_A           50 TEDGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYASPWYMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDS  129 (476)
T ss_dssp             ETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHH
T ss_pred             ECCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHH
Confidence            3456789999887  56676 58899988875 2   2211  3444556788888888887777899999999999999


Q ss_pred             HHHHhcC--------CCCEEEEcCCCchhHHHHHHHcCCE-------------EEEecCCCC---CCCC--------HHH
Q 014594          162 IMRCVLD--------PGDKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSD---FSLN--------VEL  209 (422)
Q Consensus       162 ~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~---~~~d--------~~~  209 (422)
                      +++.+..        .+++|++..|+|+++...+...+..             +..++....   +..|        +++
T Consensus       130 Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  209 (476)
T 3i5t_A          130 ALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQE  209 (476)
T ss_dssp             HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHH
Confidence            9997753        3578999999998776655543322             222331111   1222        788


Q ss_pred             HHHHhhc---CCCeEEEEeCCCCccCc-CCC---HHHHHHHHcC-CCeEEEccCCccccCCCch--hh-hhhcCCcEEEE
Q 014594          210 IADAVER---EKPKCIFLTSPNNPDGS-IIN---DEDLLKILEM-PILVVLDEAYTEFSGLESR--ME-WVKKHDNLIVL  278 (422)
Q Consensus       210 l~~~i~~---~~~~~i~l~~p~NPtG~-~~~---~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~-~~~~~~~~i~~  278 (422)
                      |++.+.+   +++++|+++.++|++|. +++   .+++.++|+. |+++|+||+|.+|...+..  .. ..+..++++  
T Consensus       210 le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~--  287 (476)
T 3i5t_A          210 FEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDII--  287 (476)
T ss_dssp             HHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEE--
T ss_pred             HHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchh--
Confidence            9888863   46788888888899997 445   5556666665 9999999999998654432  22 222233433  


Q ss_pred             ccChhhhcccc-ccceeeecCHHHHHHHHHh-------c--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHH
Q 014594          279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA-------K--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKL  348 (422)
Q Consensus       279 ~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~-------~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~  348 (422)
                       +|||.++ .| +|+|++++++++++.+...       .  .+|+.++++++++.++|+..+-.+..++++++.+++.+.
T Consensus       288 -t~sK~l~-~G~~plg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~  365 (476)
T 3i5t_A          288 -TFAKGVT-SGYVPLGGLAISEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAA  365 (476)
T ss_dssp             -EECGGGG-TTSSCCEEEEECHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred             -hhhhhhc-CCCcCeEEEEECHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence             5789998 58 9999999999999988653       1  457889999999999986421111566667777777777


Q ss_pred             HccC---CCCcccCCCceEEEEEeCCCC-----------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhH
Q 014594          349 LKDV---PFLNPYPSYSNFILCEVTSGM-----------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHT  411 (422)
Q Consensus       349 L~~~---~~~~~~p~~~~f~~~~~~~~~-----------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~  411 (422)
                      |+++   +.+...+..|.|+++++....           ....+.+.|+++||.+++.+     +++||++.   +.+++
T Consensus       366 L~~l~~~~~v~~v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-----~~iRi~p~l~~t~e~i  440 (476)
T 3i5t_A          366 LASLRDLPGVAETRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPLG-----DLCVISPPLIISRAQI  440 (476)
T ss_dssp             HHTTTTSTTEEEEEEETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEET-----TEEEECCCTTCCHHHH
T ss_pred             HHHHhcCCCeEEEEecCceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEecC-----CEEEEECCCCCCHHHH
Confidence            7654   333345667888888886421           15678888999999999853     89999944   44444


Q ss_pred             HHHHHHHh
Q 014594          412 DALMECLM  419 (422)
Q Consensus       412 ~~l~~al~  419 (422)
                      +++.++|+
T Consensus       441 ~~~l~~l~  448 (476)
T 3i5t_A          441 DEMVAIMR  448 (476)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            44444443

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.96  E-value=6.7e-27  Score=229.35  Aligned_cols=279  Identities=16%  Similarity=0.147  Sum_probs=208.7

Q ss_pred             CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEecCC
Q 014594          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRK  200 (422)
Q Consensus       125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~  200 (422)
                      +|+++...++++++++++|.+  +.++++++++++..++++++++||+|+++.|.|+.+...+    ...|++++.++. 
T Consensus        61 r~~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-  137 (398)
T 1gc0_A           61 RISNPTLNLLEARMASLEGGE--AGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM-  137 (398)
T ss_dssp             --CCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT-
T ss_pred             CCCChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-
Confidence            346667889999999999975  5555666689999999999999999999999998776655    567999999884 


Q ss_pred             CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (422)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~  279 (422)
                          .|++++++.++ +++++|++++|+||||.+++.+++.++++. |+++|+||+|..+..... .    ..+.++++.
T Consensus       138 ----~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~-~----~~~~d~~~~  207 (398)
T 1gc0_A          138 ----ADLQALEAAMT-PATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRP-L----ELGADLVVH  207 (398)
T ss_dssp             ----TCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCCG-G----GGTCSEEEE
T ss_pred             ----CCHHHHHHhcC-CCCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCCc-h----hhCceEEEE
Confidence                38999999997 689999999999999999999999999998 999999999986543221 1    234568999


Q ss_pred             cChhhhccccccc-eeeecCHHHHH-HHHHhc---CCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC
Q 014594          280 TFSKRAGLAGLRV-GYGAFPLSIIE-YLWRAK---QPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP  353 (422)
Q Consensus       280 S~SK~~~~~G~r~-G~i~~~~~~~~-~l~~~~---~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~  353 (422)
                      |+||.++.+|.|+ ||++++++.++ .+....   ..++.+++.+.++.+.++.   +. ..++..++.+.+.+.|++++
T Consensus       208 S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~L~~~~  284 (398)
T 1gc0_A          208 SATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT---LNLRMDRHCANAQVLAEFLARQP  284 (398)
T ss_dssp             ETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTCT
T ss_pred             CCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCCCCCHHHHHHHHhccch---HHHHHHHHHHHHHHHHHHHhcCC
Confidence            9999999999998 99999988765 444332   2356788888888777753   34 66677778888888887754


Q ss_pred             CCc--------------cc----CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEe---CCC------------------
Q 014594          354 FLN--------------PY----PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRH---YNN------------------  394 (422)
Q Consensus       354 ~~~--------------~~----p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~---~~~------------------  394 (422)
                      .+.              +.    +..++++.++++.  +.+...+.+.+.|+.++.   |+.                  
T Consensus       285 ~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~  362 (398)
T 1gc0_A          285 QVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG--GIGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPE  362 (398)
T ss_dssp             TEEEEEEC----------------CCTTEEEEEETT--HHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHH
T ss_pred             CeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC--CHHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHH
Confidence            321              11    1357788888862  234566667788888875   211                  


Q ss_pred             ----CC-CCCeEEEEecC---hhhHHHHHHHHhhh
Q 014594          395 ----KE-LKGYVRVSVGK---PEHTDALMECLMHL  421 (422)
Q Consensus       395 ----~~-~~~~iRis~~~---~~~~~~l~~al~~l  421 (422)
                          .+ .+++||||++.   .++++.|.++|+++
T Consensus       363 ~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~  397 (398)
T 1gc0_A          363 ERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS  397 (398)
T ss_dssp             HHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence                01 14899999986   34455556665543

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=99.96  E-value=1.7e-27  Score=239.15  Aligned_cols=317  Identities=14%  Similarity=0.096  Sum_probs=222.2

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-CCCC--CCCC-------cchHH----HHHHHHHHcCCCCCC----EEEeCCHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-KFPY--IYPD-------PESRR----LRAALAKDSGLESDH----ILVGCGAD  156 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~--~y~~-------~~~~~----lr~~la~~~~~~~~~----i~~~~G~~  156 (422)
                      .+.|+|..++++  +++.+++++.+. ...+  +||.       ....+    +++.+++++|+++++    |++++|+ 
T Consensus        44 ~~~i~L~a~e~~--~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs-  120 (483)
T 1rv3_A           44 RVGLELIASENF--ASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGS-  120 (483)
T ss_dssp             HSSEECCTTCCC--CCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH-
T ss_pred             hcCeEEEcCCCC--CCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEECCcH-
Confidence            356999888875  579999999873 2212  3432       12233    448888899987654    8888888 


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcC--CEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEe
Q 014594          157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEF--------DAAVNG--AAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLT  225 (422)
Q Consensus       157 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g--~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~  225 (422)
                      +++..++.++++|||+|++++|.|..+..        .+...|  .+++.++.+ +++.+|+++|++.++++++|+|++ 
T Consensus       121 ~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~~~tklIi~-  199 (483)
T 1rv3_A          121 PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIA-  199 (483)
T ss_dssp             HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE-
T ss_pred             HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhhcCCcEEEE-
Confidence            88888888899999999999998865532        122234  566666544 567899999999997568999999 


Q ss_pred             CCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHH---
Q 014594          226 SPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS---  300 (422)
Q Consensus       226 ~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~---  300 (422)
                      +++||+ .+++.+++.+||+. |+++|+|++|.. +...+.....+.  ...+++.|++|.+  .|+|.||++++++   
T Consensus       200 ~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~--~~div~~s~~K~l--~GprgG~i~~~~~~~~  274 (483)
T 1rv3_A          200 GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE--HCHVVTTTTHKTL--RGCRAGMIFYRRGVRS  274 (483)
T ss_dssp             CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG--TCSEEEEESSGGG--CCCSCEEEEEECSBCC
T ss_pred             eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC--CCcEEEecCcccC--CCCCceEEEEcchhhh
Confidence            999999 99999999999987 999999999873 221111001111  2347889999976  6889999999764   


Q ss_pred             ------------HHHHHHHhcCC---CCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC-C
Q 014594          301 ------------IIEYLWRAKQP---YNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPS-Y  361 (422)
Q Consensus       301 ------------~~~~l~~~~~~---~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~-~  361 (422)
                                  +.+.+.....+   .+++.....+...+++.  ..+++ .++++.++++++.+.|+++++..+.+. .
T Consensus       275 ~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~  354 (483)
T 1rv3_A          275 VDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSD  354 (483)
T ss_dssp             -------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCS
T ss_pred             hccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhcCCEeccCCCC
Confidence                        44444433222   33444444444444442  23445 888999999999999998853323332 2


Q ss_pred             ceEEEEEeCC-CCCHHHHHHHHHhCCcEEE----eCCC-CCCCCeEEEEecC-------hhhHHHHHHHHhh
Q 014594          362 SNFILCEVTS-GMDAKKLKDDLAKMGVMIR----HYNN-KELKGYVRVSVGK-------PEHTDALMECLMH  420 (422)
Q Consensus       362 ~~f~~~~~~~-~~~~~~~~~~L~~~gI~v~----~~~~-~~~~~~iRis~~~-------~~~~~~l~~al~~  420 (422)
                      ..++|++++. +.+.+++.+.|.++||.++    ++.. ....+++||+++.       .++++++.++|++
T Consensus       355 ~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~  426 (483)
T 1rv3_A          355 NHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHR  426 (483)
T ss_dssp             SSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             CceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHHHH
Confidence            3678888853 5688889888989999999    7653 2246799999874       4566666666554

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=99.96  E-value=5.8e-26  Score=223.68  Aligned_cols=295  Identities=20%  Similarity=0.230  Sum_probs=215.6

Q ss_pred             CCCCCCHHHHHHHhcCCCCCCCC---CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch
Q 014594          105 NPYGPPPEVREALGQLKFPYIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT  181 (422)
Q Consensus       105 ~~~~~~~~v~~al~~~~~~~~y~---~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~  181 (422)
                      ..++.++.+.+++.. ...+.|+   .+...+++++++++++.+  ++++++|+++++..++++++++||+|+++.|.|.
T Consensus        30 ~~~~~~~~~~~~~~~-~~~~~y~~~~~~~~~~l~~~la~~~g~~--~~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~  106 (412)
T 2cb1_A           30 YGFKTLEEGQERFAT-GEGYVYARQKDPTAKALEERLKALEGAL--EAVVLASGQAATFAALLALLRPGDEVVAAKGLFG  106 (412)
T ss_dssp             CCCSSHHHHHHHHHH-CCSCSBTTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHTTCCTTCEEEEETTCCH
T ss_pred             eecCChHHHHHHhcc-ccCcCcCCCCChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCch
Confidence            345556666666652 2234553   345789999999999964  8999999999999999999999999999999998


Q ss_pred             hHHHH----HHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCC
Q 014594          182 MYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY  256 (422)
Q Consensus       182 ~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay  256 (422)
                      .....    ++..|++++.++.      |+++++++++ +++++|++++|+||||.+++.+++.++++. |+++|+||+|
T Consensus       107 ~~~~~~~~~~~~~g~~~~~~~~------~~~~l~~~i~-~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~  179 (412)
T 2cb1_A          107 QTIGLFGQVLSLMGVTVRYVDP------EPEAVREALS-AKTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTF  179 (412)
T ss_dssp             HHHHHHHHTTTTTTCEEEEECS------SHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGG
T ss_pred             hHHHHHHHHHHHcCCEEEEECC------CHHHHHHHhc-cCCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCC
Confidence            65444    3347999999874      3899999997 689999999999999999999999999987 9999999999


Q ss_pred             ccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCH----------------------------HHHHHHHHh
Q 014594          257 TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL----------------------------SIIEYLWRA  308 (422)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~----------------------------~~~~~l~~~  308 (422)
                      ..+.......    ..+.++++.|+||.++.+|.|+|++++.+                            ++.+.++..
T Consensus       180 ~~~~~~~~~~----~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~  255 (412)
T 2cb1_A          180 GAAGALCRPL----AWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTL  255 (412)
T ss_dssp             GTTTTSCCGG----GGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHH
T ss_pred             ccccccCCcc----ccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHH
Confidence            8762111111    23567999999999988999999988633                            445555543


Q ss_pred             c-CC--CCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCc-c-cC----------------CCceEEEE
Q 014594          309 K-QP--YNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLN-P-YP----------------SYSNFILC  367 (422)
Q Consensus       309 ~-~~--~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~p----------------~~~~f~~~  367 (422)
                      . ..  +..++.....+...++.  +....++..++.+++.+.|.+.+.+. + .|                ..+.++.+
T Consensus       256 ~~~~~g~~~~~~~a~~~~~~l~~--l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~  333 (412)
T 2cb1_A          256 GLSLCGMALSPFNAYLLFQGLET--VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTL  333 (412)
T ss_dssp             HTTTTCCCCCHHHHHHHHHHGGG--HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEE
T ss_pred             HHHhcCCCCChHHhHHHHcCCch--HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEE
Confidence            3 22  23455555555555532  22255566788899999998876554 3 13                24567888


Q ss_pred             EeCCCCCHHHHHHHHHhCCcEEEeCC---------CC------C-----------CCCeEEEEecCh---hhHHHHHHHH
Q 014594          368 EVTSGMDAKKLKDDLAKMGVMIRHYN---------NK------E-----------LKGYVRVSVGKP---EHTDALMECL  418 (422)
Q Consensus       368 ~~~~~~~~~~~~~~L~~~gI~v~~~~---------~~------~-----------~~~~iRis~~~~---~~~~~l~~al  418 (422)
                      .+  + +.+.+.+.|.+.||.+ .++         .+      .           .++.||+|++..   +++++|.++|
T Consensus       334 ~~--~-~~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al  409 (412)
T 2cb1_A          334 DL--G-DLERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEAL  409 (412)
T ss_dssp             EC--S-SHHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred             Ee--C-CHHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHH
Confidence            88  3 7788888888899998 653         11      0           158999999854   3445555555


Q ss_pred             h
Q 014594          419 M  419 (422)
Q Consensus       419 ~  419 (422)
                      +
T Consensus       410 ~  410 (412)
T 2cb1_A          410 E  410 (412)
T ss_dssp             H
T ss_pred             h
Confidence            4

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=99.95  E-value=2.2e-27  Score=239.54  Aligned_cols=282  Identities=13%  Similarity=0.102  Sum_probs=215.0

Q ss_pred             HHHHHHHHHcCCC--CCCEEEeCCHHHHHHHHHHHhcC-----CC---CEEEEcCCCchhHHHHHHHcCCEEEEecCCC-
Q 014594          133 RLRAALAKDSGLE--SDHILVGCGADELIDLIMRCVLD-----PG---DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-  201 (422)
Q Consensus       133 ~lr~~la~~~~~~--~~~i~~~~G~~~al~~~~~~l~~-----~g---d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-  201 (422)
                      ++++.+++++|.+  ++++++++|+++++..+++++++     +|   |+|+++.|+|..+...++..|++++.++.++ 
T Consensus       111 ~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~~  190 (497)
T 3mc6_A          111 EVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPT  190 (497)
T ss_dssp             HHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCTT
T ss_pred             HHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCcc
Confidence            4566677778887  67999999999999999998865     56   8999999999999999999999999999776 


Q ss_pred             CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCC-------Cch-hhhhhcC
Q 014594          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-------ESR-MEWVKKH  272 (422)
Q Consensus       202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~-------~~~-~~~~~~~  272 (422)
                      ++.+|+++|+++++ +++++|++++|+||||.+.+.++|.+||+. |+++|+|++|..+...       +.. .......
T Consensus       191 ~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~  269 (497)
T 3mc6_A          191 TYQVDLGKVKKFIN-KNTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVP  269 (497)
T ss_dssp             TCSBCTTTTGGGCC-SSEEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTST
T ss_pred             cCcCCHHHHHHHHh-hCCEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCC
Confidence            78899999999997 689999999999999999999999999987 9999999999854310       000 0111223


Q ss_pred             CcEEEEccChhhhccccccceeeecCHHHHHHHHHhc-CCCC------------Cc---HHHHHHHHHHccCChHHHHHH
Q 014594          273 DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK-QPYN------------VS---VAAEVAACAALQNPIYLEVKE  336 (422)
Q Consensus       273 ~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~-~~~~------------~~---~~~~~aa~~~L~~~~~~~~~~  336 (422)
                      +.++++.|++|.+ .+|.++|+++++.+.+....... ..+.            .+   ..++.++...+....+.+..+
T Consensus       270 g~d~~~~s~~K~l-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~  348 (497)
T 3mc6_A          270 GVTSISCDTHKYG-FAPKGSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQ  348 (497)
T ss_dssp             TCCEEEEETTTTT-CCCSSCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEECchhhc-CCCCCceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHH
Confidence            4568888999954 47888999999876655432111 1111            11   344666666665444444888


Q ss_pred             HHHHHHHHHHHHHcc-CCCCcc-cCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHH
Q 014594          337 ALIKERERLFKLLKD-VPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTD  412 (422)
Q Consensus       337 ~~~~~~~~l~~~L~~-~~~~~~-~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~  412 (422)
                      +..++++++.+.|++ ++.+.+ .+..++++++..+ +.+..++.+.|.++||.++.+..   ++.+|++++  +.++++
T Consensus       349 ~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~~-~~~~~~l~~~L~~~Gi~v~~~~~---~~~~ri~~~~~t~e~i~  424 (497)
T 3mc6_A          349 EIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSK-TLNIHELSDRLSKKGWHFNALQK---PVALHMAFTRLSAHVVD  424 (497)
T ss_dssp             HHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEECT-TTTHHHHHHHHHTTTCBCEECCS---SCCEEEECCTTTTCTHH
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeCC-CCCHHHHHHHHHhCCEEEecCCC---CCeEEEEEeCCCHHHHH
Confidence            889999999999999 565554 3566777777765 56889999999999999987653   347899887  566677


Q ss_pred             HHHHHHhh
Q 014594          413 ALMECLMH  420 (422)
Q Consensus       413 ~l~~al~~  420 (422)
                      ++.++|++
T Consensus       425 ~~~~~L~~  432 (497)
T 3mc6_A          425 EICDILRT  432 (497)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            77777664

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.95  E-value=1.6e-27  Score=231.43  Aligned_cols=305  Identities=15%  Similarity=0.139  Sum_probs=223.6

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEE
Q 014594           96 DIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKI  173 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~V  173 (422)
                      ++++++.+.+++.+   +.+++.+. .....|+.++..++|++++++++.+  ++++++|+++++..+++++ +++||+|
T Consensus         7 ~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~~~~~~~~~gd~v   81 (374)
T 3uwc_A            7 PYSYLERQFADIEP---YLNDLREFIKTADFTLGAELEKFEKRFAALHNAP--HAIGVGTGTDALAMSFKMLNIGAGDEV   81 (374)
T ss_dssp             CSCCHHHHTSSCHH---HHHHHHHHHHHTCCSSCHHHHHHHHHHHHHTTCS--EEEEESCHHHHHHHHHHHTTCCTTCEE
T ss_pred             eeeccccCCCCchH---HHHHHHHHHHcCCcccChhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCCCCCEE
Confidence            45777777776643   77777663 2223346778899999999999964  8899999999999999999 9999999


Q ss_pred             EEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEE
Q 014594          174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVL  252 (422)
Q Consensus       174 l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~  252 (422)
                      +++.|+|+.+...++..|++++.++.++++.+|++++++.++ +++++|+   |+||||.+.+.+++.++++. |+++|+
T Consensus        82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~  157 (374)
T 3uwc_A           82 ITCANTFIASVGAIVQAGATPVLVDSENGYVIDPEKIEAAIT-DKTKAIM---PVHYTGNIADMPALAKIAKKHNLHIVE  157 (374)
T ss_dssp             EEESSSCHHHHHHHHHTTCEEEEECBCTTSSBCGGGTGGGCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEE
T ss_pred             EECCCccHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHhCC-CCceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEE
Confidence            999999999999999999999999987778899999999997 5788887   99999999999999999987 999999


Q ss_pred             ccCCccccC-CCchhhhhhcCCcEEEEccCh--hhhccccccceeeecC-HHHHHHHHHhcCC--------------CCC
Q 014594          253 DEAYTEFSG-LESRMEWVKKHDNLIVLRTFS--KRAGLAGLRVGYGAFP-LSIIEYLWRAKQP--------------YNV  314 (422)
Q Consensus       253 Deay~~~~~-~~~~~~~~~~~~~~i~~~S~S--K~~~~~G~r~G~i~~~-~~~~~~l~~~~~~--------------~~~  314 (422)
                      ||+|..+.. ........    .++++.|++  |.++.+|. .|+++++ +++.+.+......              +..
T Consensus       158 D~~~~~g~~~~~~~~~~~----~d~~~~s~~~~K~l~~~g~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (374)
T 3uwc_A          158 DACQTILGRINDKFVGSW----GQFACFSLHPLKNLNVWSD-AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRM  232 (374)
T ss_dssp             ECTTCTTCEETTEETTSS----SSEEEEECSSSSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBC
T ss_pred             eCCCccCceeCCeecccc----ccEEEEeCCCCCcCCccce-eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCC
Confidence            999986532 22111111    146777866  98875465 8888875 5677777654321              223


Q ss_pred             cHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC-Cccc--CCCc--eE--EEEEeCCCCCHHHHHHHHHhCC
Q 014594          315 SVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF-LNPY--PSYS--NF--ILCEVTSGMDAKKLKDDLAKMG  386 (422)
Q Consensus       315 ~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~-~~~~--p~~~--~f--~~~~~~~~~~~~~~~~~L~~~g  386 (422)
                      +.+...+....+   +.++ ..++.+++++++.+.|++++. +.+.  +..+  .|  +.+..   .+.+++.+.|.++|
T Consensus       233 ~~~~aa~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~L~~~g  306 (374)
T 3uwc_A          233 DTIQAVIANRLM---NQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRV---KYRDQLFQYLKDNG  306 (374)
T ss_dssp             CHHHHHHHHHHG---GGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEE---TTHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEc---CCHHHHHHHHHHCC
Confidence            444444433333   2334 777788888999999998875 4332  2222  22  22333   27889999999999


Q ss_pred             cEEEeCCCC----------------CC-------CCeEEEEec---ChhhHHHHHHHHhh
Q 014594          387 VMIRHYNNK----------------EL-------KGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       387 I~v~~~~~~----------------~~-------~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      |.++++...                ..       .+.+||++.   +.++++++.++|++
T Consensus       307 i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~  366 (374)
T 3uwc_A          307 IEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVRE  366 (374)
T ss_dssp             BCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHH
T ss_pred             CccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHH
Confidence            999887510                00       168999876   45666666666654

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.95  E-value=6.3e-27  Score=229.18  Aligned_cols=297  Identities=14%  Similarity=0.086  Sum_probs=214.9

Q ss_pred             HHHHHHHhcCCCCCCCCCcc--hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHH
Q 014594          111 PEVREALGQLKFPYIYPDPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDA  187 (422)
Q Consensus       111 ~~v~~al~~~~~~~~y~~~~--~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~  187 (422)
                      +++.+++.+......|+..|  ..++|++++++++.  +++++++|+++++..+++++ +++||+|+++.|+|..+...+
T Consensus        12 ~~v~~a~~~~~~~~~~~~~g~~~~~l~~~la~~~~~--~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~~~~   89 (394)
T 1o69_A           12 GNELKYIEEVFKSNYIAPLGEFVNRFEQSVKDYSKS--ENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPI   89 (394)
T ss_dssp             CCHHHHHHHHHHHTTTSCTTHHHHHHHHHHHHHHCC--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHH
T ss_pred             HHHHHHHHHHHHcCCccCCChHHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHH
Confidence            45666665521112234335  78999999999996  68999999999999999999 899999999999999999999


Q ss_pred             HHcCCEEEEecCCCCCCCCHHHHHHHhhcC--CCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCc-cccCCC
Q 014594          188 AVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT-EFSGLE  263 (422)
Q Consensus       188 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~-~~~~~~  263 (422)
                      +..|++++.++.++++.+|++++++.+++.  ++++|++++   |||...+.+++.++++. |+++|+||+|. ++.+.+
T Consensus        90 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~  166 (394)
T 1o69_A           90 CYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKN  166 (394)
T ss_dssp             HHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETT
T ss_pred             HHcCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcccceeCC
Confidence            999999999998777889999999999743  799999886   89999999999999987 99999999998 343322


Q ss_pred             chhhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcCCCC----------------CcHHHHHHHHHHc
Q 014594          264 SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQPYN----------------VSVAAEVAACAAL  326 (422)
Q Consensus       264 ~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~~~----------------~~~~~~~aa~~~L  326 (422)
                      ....   ...+ +.+.||||..+++|.|+||++++ +++++.+......+.                .+.+...++...+
T Consensus       167 ~~~~---~~~~-~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l  242 (394)
T 1o69_A          167 KALG---TFGE-FGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQM  242 (394)
T ss_dssp             EETT---SSSS-EEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHH
T ss_pred             cccc---cccC-cEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHH
Confidence            2111   1112 45556644444567799999995 898888876543220                2333333333333


Q ss_pred             cCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC----ce--EEEEEeCCC---------------------CCHHHH
Q 014594          327 QNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSY----SN--FILCEVTSG---------------------MDAKKL  378 (422)
Q Consensus       327 ~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~--f~~~~~~~~---------------------~~~~~~  378 (422)
                         ++++ ..++++++++++.+.|+++  +.+.+..    ++  .+++.++..                     .+.+++
T Consensus       243 ---~~l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  317 (394)
T 1o69_A          243 ---EVLEQRVLKKREIYEWYKEFLGEY--FSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKL  317 (394)
T ss_dssp             ---TTHHHHHHHHHHHHHHHHHHHTTT--EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHH
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHhccc--ccccCCCCCCcceeEEEEEEecchhhccccccccccccccccccccCHHHH
Confidence               3455 7788899999999999887  3433331    34  367888632                     267889


Q ss_pred             HHHHHhCCcEEEeCCCC-----CCC---------------CeEEEEe---cChhhHHHHHHHHhhh
Q 014594          379 KDDLAKMGVMIRHYNNK-----ELK---------------GYVRVSV---GKPEHTDALMECLMHL  421 (422)
Q Consensus       379 ~~~L~~~gI~v~~~~~~-----~~~---------------~~iRis~---~~~~~~~~l~~al~~l  421 (422)
                      .+.|.++||.++++..+     ...               ..+|+..   .+.++++++.++|+.+
T Consensus       318 ~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~  383 (394)
T 1o69_A          318 IEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKS  383 (394)
T ss_dssp             HHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence            99999999999987431     111               2334333   3567788888887653

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=99.95  E-value=1.1e-27  Score=238.98  Aligned_cols=308  Identities=14%  Similarity=0.087  Sum_probs=201.4

Q ss_pred             CCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (422)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~  165 (422)
                      ..+.+++||..+.  ++++ ++|++.+++.+ +...  ..|+..-..++.+.+++.++ .+++|++++|++++++.+++.
T Consensus        54 ~~g~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~gg~eA~~~al~~  132 (453)
T 2cy8_A           54 VDGNVYLDFFGGHGALVLGHGHPRVNAAIAEALSHGVQYAASHPLEVRWAERIVAAFP-SIRKLRFTGSGTETTLLALRV  132 (453)
T ss_dssp             TTCCEEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTCSSCSSCHHHHHHHHHHHHHCT-TCSEEEEESCHHHHHHHHHHH
T ss_pred             CCCCEEEECcccHhhcccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCCHHHHHHHHHHH
Confidence            3456789998886  4444 68999999876 3322  23443344566666666666 678999999999999999997


Q ss_pred             ---hcCCCCEEEEcCCCchhHHHHHHH-----------cCC------EEEEecCCCCCCCCHHHHHHHhhc--CCCeEEE
Q 014594          166 ---VLDPGDKIVDCPPTFTMYEFDAAV-----------NGA------AVVKVPRKSDFSLNVELIADAVER--EKPKCIF  223 (422)
Q Consensus       166 ---l~~~gd~Vl~~~p~y~~~~~~~~~-----------~g~------~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~  223 (422)
                         +.++ +.|++.+|+|+.+...+..           .|.      .++.++.     .|++++++.+++  +++++|+
T Consensus       133 ar~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi  206 (453)
T 2cy8_A          133 ARAFTGR-RMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-----DDIEGMREVFANHGSDIAAFI  206 (453)
T ss_dssp             HHHHHCC-CEEEEECC----------------------------CGGGEEEECT-----TCHHHHHHHHHHHGGGEEEEE
T ss_pred             HHHhhCC-CEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-----CCHHHHHHHHHhcCCCEEEEE
Confidence               5554 6788888999865543221           132      1333332     389999999864  3567776


Q ss_pred             EeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceeee
Q 014594          224 LTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA  296 (422)
Q Consensus       224 l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~  296 (422)
                      +++.+||||.+.+    .+++.++|+. |+++|+||+|.+| ..+..  ....+...++   .||||.++ +|+|+||++
T Consensus       207 ~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~di---~s~sK~l~-~G~~~G~v~  281 (453)
T 2cy8_A          207 AEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNHGMQALLDVQPDL---TCLAKASA-GGLPGGILG  281 (453)
T ss_dssp             ECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTCCCSE---EEEEGGGG-TTSSCEEEE
T ss_pred             ECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhHHhCCCCcE---EEEChhhh-CCcceEEEe
Confidence            6655688998775    5556666665 9999999999987 33221  1122222332   38999998 599999999


Q ss_pred             cCHHHHHHHHH-------hcCCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccC----CCCcccCCCce
Q 014594          297 FPLSIIEYLWR-------AKQPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDV----PFLNPYPSYSN  363 (422)
Q Consensus       297 ~~~~~~~~l~~-------~~~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~  363 (422)
                      +++++++.+..       ...+++.|++++.++.++|+. .  .+ ..++++++++++.+.|+++    +.....++.|+
T Consensus       282 ~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~  359 (453)
T 2cy8_A          282 GREDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL--EDDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFS  359 (453)
T ss_dssp             ECHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred             chHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeee
Confidence            99998887654       123477899999998888865 3  23 6667777777777777653    54333466788


Q ss_pred             EEEEEeCC-----C--------------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC-hhhHHHHHHHHh
Q 014594          364 FILCEVTS-----G--------------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK-PEHTDALMECLM  419 (422)
Q Consensus       364 f~~~~~~~-----~--------------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~-~~~~~~l~~al~  419 (422)
                      |+|+++++     .              .+..++.+.|+++||.+.++      +.+|+++.. .++++++.++|+
T Consensus       360 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~~~------~~~~l~~~~t~~~i~~~l~~l~  429 (453)
T 2cy8_A          360 GFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDIGGR------GSVFLSAQHEREHVEHLVTTFD  429 (453)
T ss_dssp             EEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEECBTT------TEEECCTTCCHHHHHHHHHHHH
T ss_pred             EEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCCeEEeCC------CCEEeeccCCHHHHHHHHHHHH
Confidence            99999974     1              12567889999999999543      247777543 344444444443

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.95  E-value=3.6e-27  Score=230.78  Aligned_cols=279  Identities=15%  Similarity=0.144  Sum_probs=202.8

Q ss_pred             CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEecCC
Q 014594          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRK  200 (422)
Q Consensus       125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~  200 (422)
                      +|+++...++|++++++++.+  +.+++++++++++.+++ ++++||+|+++.|.|+....    .++..|++++.++.+
T Consensus        51 ~~~~~~~~~lr~~la~~~g~~--~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~  127 (393)
T 1n8p_A           51 RSQNPNRENLERAVAALENAQ--YGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDL  127 (393)
T ss_dssp             TTCCHHHHHHHHHHHHHTTCS--EEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSH
T ss_pred             cCCChhHHHHHHHHHHHhCCC--cEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCC
Confidence            456667889999999999975  45555666999999999 99999999999999984333    345579999999853


Q ss_pred             CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-----CCeEEEccCCccccCCCchhhhhhcCCcE
Q 014594          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-----PILVVLDEAYTEFSGLESRMEWVKKHDNL  275 (422)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-----~~~li~Deay~~~~~~~~~~~~~~~~~~~  275 (422)
                           | ++++++++ +++++|++++|+||||.+++.+++.++++.     |+++|+||+|..+... ...    ..+.+
T Consensus       128 -----d-~~l~~~i~-~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~~~----~~~~d  195 (393)
T 1n8p_A          128 -----L-NDLPQLIK-ENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-NPL----NFGAD  195 (393)
T ss_dssp             -----H-HHHHHHSC-SSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-CGG----GGTCS
T ss_pred             -----h-HHHHHhcc-cCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-CHH----HcCCe
Confidence                 7 89999997 689999999999999999999999999974     8999999999976542 211    22467


Q ss_pred             EEEccChhhhccccccc-eeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHc
Q 014594          276 IVLRTFSKRAGLAGLRV-GYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLK  350 (422)
Q Consensus       276 i~~~S~SK~~~~~G~r~-G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~  350 (422)
                      +++.|+||.+|.+|+|+ ||+++ ++++++.+......  .+.++..+.++...++.   +. ..++..++++.+.+.|+
T Consensus       196 i~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~L~  272 (393)
T 1n8p_A          196 IVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT---LHLRVRQAALSANKIAEFLA  272 (393)
T ss_dssp             EEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccch---HHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999 99998 48888888765442  34566666666666643   33 66667778888888888


Q ss_pred             cCCC-Cc-c-cC----------------C-C-ceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCC----------CC---
Q 014594          351 DVPF-LN-P-YP----------------S-Y-SNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYN----------NK---  395 (422)
Q Consensus       351 ~~~~-~~-~-~p----------------~-~-~~f~~~~~~~~-~~~~~~~~~L~~~gI~v~~~~----------~~---  395 (422)
                      +.+. +. + +|                . . ++++++.+++. .+.+.+.+.|...++.+..|+          ..   
T Consensus       273 ~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~  352 (393)
T 1n8p_A          273 ADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGG  352 (393)
T ss_dssp             SCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCS
T ss_pred             hCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhCCcceECCCCCCCcceeeccccccccc
Confidence            7654 21 1 22                1 3 67889999732 234445555443344443221          00   


Q ss_pred             ---------C-CCCeEEEEecCh---hhHHHHHHHHhhh
Q 014594          396 ---------E-LKGYVRVSVGKP---EHTDALMECLMHL  421 (422)
Q Consensus       396 ---------~-~~~~iRis~~~~---~~~~~l~~al~~l  421 (422)
                               + .++.||||++..   ++++.+.++++.+
T Consensus       353 ~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~  391 (393)
T 1n8p_A          353 IPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA  391 (393)
T ss_dssp             SCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred             cCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence                     1 147999999854   3445666666543

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=99.95  E-value=1.1e-26  Score=234.29  Aligned_cols=312  Identities=15%  Similarity=0.068  Sum_probs=225.1

Q ss_pred             CCCCHHHHHHHhcC-CCCC-CC-CCcchH----HHHHHHHHHcCCC--CCCEE---EeCCHHHHHHHHHHHhcCC-----
Q 014594          107 YGPPPEVREALGQL-KFPY-IY-PDPESR----RLRAALAKDSGLE--SDHIL---VGCGADELIDLIMRCVLDP-----  169 (422)
Q Consensus       107 ~~~~~~v~~al~~~-~~~~-~y-~~~~~~----~lr~~la~~~~~~--~~~i~---~~~G~~~al~~~~~~l~~~-----  169 (422)
                      ..++|.+.+++.+. .... .| ..++..    ++++.+++++|++  +++++   +|+|+++++.+++.++..+     
T Consensus        66 ~~~~~~v~~~l~~~~~~~~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~  145 (502)
T 3hbx_A           66 TWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKR  145 (502)
T ss_dssp             CCCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhccCCCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHH
Confidence            34578888888763 2211 12 223322    5677788889987  55554   5899999999998877655     


Q ss_pred             ---CC-----EEEEcCCCchhHHHHHHHcCCEEEEecCCCC-CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHH
Q 014594          170 ---GD-----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL  240 (422)
Q Consensus       170 ---gd-----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l  240 (422)
                         |+     .|+++.++|..+...++..|++++.++.+++ +.+|++++++++. +++++|++++|+||||.+.+.++|
T Consensus       146 ~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~-~~t~~v~~~~~~n~tG~~~~l~~I  224 (502)
T 3hbx_A          146 KAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVD-ENTICVAAILGSTLNGEFEDVKLL  224 (502)
T ss_dssp             HHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCC-TTEEEEEEEBSCTTTCCBCCHHHH
T ss_pred             HhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCCCcCcCCHHHHHHHHh-hCCEEEEEecCCCCCCcccCHHHH
Confidence               76     8999999999999999999999999997654 8899999999997 689999999999999999999999


Q ss_pred             HHHHcC-------CCeEEEccCCccccC---CCchhhhhhcCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhc
Q 014594          241 LKILEM-------PILVVLDEAYTEFSG---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAK  309 (422)
Q Consensus       241 ~~i~~~-------~~~li~Deay~~~~~---~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~  309 (422)
                      .++++.       |+++++|++|..+..   .+.....+...+.+.+..|.+|. ++++.++|+++.. ++.+.......
T Consensus       225 ~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~-l~~p~g~G~~~~~~~~~l~~~~~~~  303 (502)
T 3hbx_A          225 NDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKY-GLVYAGIGWVIWRNKEDLPEELIFH  303 (502)
T ss_dssp             HHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTT-TCCCSSCEEEEESSGGGSCGGGCEE
T ss_pred             HHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccc-cCCCCCeEEEEEeCHHHhhHHhccC
Confidence            999973       899999999986541   11111111123445677788995 4577789988774 44442221111


Q ss_pred             CC------------CCC---cHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccC--CCceEEEEEeCCC
Q 014594          310 QP------------YNV---SVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYP--SYSNFILCEVTSG  372 (422)
Q Consensus       310 ~~------------~~~---~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p--~~~~f~~~~~~~~  372 (422)
                      ..            ++.   ..+.+.++...+....+.++.++..++++++.+.|++++.+.+.+  ...+++.++++++
T Consensus       304 ~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~  383 (502)
T 3hbx_A          304 INYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDS  383 (502)
T ss_dssp             ECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEESSC
T ss_pred             cccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEecCC
Confidence            11            111   334455555555554554478888899999999999998665443  4778899998742


Q ss_pred             --CCHHHHHHHHHhCCcEEEeCCCC---CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          373 --MDAKKLKDDLAKMGVMIRHYNNK---ELKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       373 --~~~~~~~~~L~~~gI~v~~~~~~---~~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                        .+..++.+.|.++||.+..+..+   ....++||+++   +.++++.|.++|++
T Consensus       384 ~~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~  439 (502)
T 3hbx_A          384 SCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEK  439 (502)
T ss_dssp             SSCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHH
Confidence              56779999999999998654332   23468999998   67777777777764

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=99.95  E-value=1.1e-25  Score=225.19  Aligned_cols=316  Identities=15%  Similarity=0.173  Sum_probs=210.1

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcC---
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQ-LKF-PYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD---  168 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~---  168 (422)
                      ..++|+..+...    +.+.+++.+ +.. ...| +.++..+||++++++++.  ++|++|+|+++++.++++++++   
T Consensus        43 ~~ylD~~~~~~~----~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~--~~v~~t~ggt~A~~~al~~~~~~~~  116 (467)
T 1ax4_A           43 AVYIDLLTDSGT----NAMSDHQWAAMITGDEAYAGSRNYYDLKDKAKELFNY--DYIIPAHQGRGAENILFPVLLKYKQ  116 (467)
T ss_dssp             GCSEECSCSSSC----CCEEHHHHHHHHTCCCCSSSCHHHHHHHHHHHHHHCC--CEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred             ceeeecccCcCC----HHHHHHHHHHHhhcccccccCccHHHHHHHHHHHcCC--CcEEEcCCcHHHHHHHHHHHHHhhc
Confidence            346777554332    344444433 122 1346 456788999999999985  6999999999999999999988   


Q ss_pred             -CCCE---EEEcCCCchhHHHHHHHcCCEEEEecCC----------CCCCCCHHHHHHHhhc---CCCeEEEEeCCCCcc
Q 014594          169 -PGDK---IVDCPPTFTMYEFDAAVNGAAVVKVPRK----------SDFSLNVELIADAVER---EKPKCIFLTSPNNPD  231 (422)
Q Consensus       169 -~gd~---Vl~~~p~y~~~~~~~~~~g~~~~~v~~~----------~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPt  231 (422)
                       +||+   |+++.+.|..+.......|++++.++..          .++.+|+++|++++++   .++++|++++|+|||
T Consensus       117 ~~Gd~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~  196 (467)
T 1ax4_A          117 KEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSA  196 (467)
T ss_dssp             HTTCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTT
T ss_pred             cCCCccceEEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCC
Confidence             9998   8888777777777788899998877532          1346899999999974   368999999999999


Q ss_pred             -CcCCCHHHHHHHHcC----CCeEEEccCCcc----c------cCCCchhhhhh----cCCcEEEEccChhhhccc-ccc
Q 014594          232 -GSIINDEDLLKILEM----PILVVLDEAYTE----F------SGLESRMEWVK----KHDNLIVLRTFSKRAGLA-GLR  291 (422)
Q Consensus       232 -G~~~~~e~l~~i~~~----~~~li~Deay~~----~------~~~~~~~~~~~----~~~~~i~~~S~SK~~~~~-G~r  291 (422)
                       |.+++.+++++|++.    |+++|+||++..    |      .+.+.....+.    .... +++.|+||.+|++ |  
T Consensus       197 gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~s~sK~~g~~~G--  273 (467)
T 1ax4_A          197 GGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYAD-ALTMSAKKDPLLNIG--  273 (467)
T ss_dssp             TSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCS-EEEEETTSTTCCSSC--
T ss_pred             CccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccc-eEEEeccccCCCCcc--
Confidence             899998877776654    999999998653    0      11111111111    1112 4668999988765 3  


Q ss_pred             ceeeecC-H-HHHHHHHHhcC------CC-CCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCc
Q 014594          292 VGYGAFP-L-SIIEYLWRAKQ------PY-NVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYS  362 (422)
Q Consensus       292 ~G~i~~~-~-~~~~~l~~~~~------~~-~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~  362 (422)
                       |+++++ + ++++.+.....      .+ ..+...+.++..+|+.....+..++..++++++.+.|++.+...+.|.++
T Consensus       274 -g~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~  352 (467)
T 1ax4_A          274 -GLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLREAGIPIQYPTGG  352 (467)
T ss_dssp             -EEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTTCCBCSSCCS
T ss_pred             -eEEEeCCHHHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhCCCCcccCCCc
Confidence             677777 6 88877654321      22 23333333333334321111122233466778888887644323457788


Q ss_pred             eEEEEE-------eCC-CCCHHHHHHHH-HhCCcEEEe-CCC-----C--C-----CCCeEEEEec----ChhhHHHHHH
Q 014594          363 NFILCE-------VTS-GMDAKKLKDDL-AKMGVMIRH-YNN-----K--E-----LKGYVRVSVG----KPEHTDALME  416 (422)
Q Consensus       363 ~f~~~~-------~~~-~~~~~~~~~~L-~~~gI~v~~-~~~-----~--~-----~~~~iRis~~----~~~~~~~l~~  416 (422)
                      +++|++       ++. +.+..++.+.| .++||.+.+ +..     +  +     ..+++||+++    +.++++++.+
T Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~  432 (467)
T 1ax4_A          353 HAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIAD  432 (467)
T ss_dssp             SEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHH
T ss_pred             eEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHH
Confidence            999999       432 34578899999 799999998 321     0  1     2479999987    2455566665


Q ss_pred             HHhh
Q 014594          417 CLMH  420 (422)
Q Consensus       417 al~~  420 (422)
                      +|++
T Consensus       433 ~l~~  436 (467)
T 1ax4_A          433 ALIG  436 (467)
T ss_dssp             HHHT
T ss_pred             HHHH
Confidence            5554

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=99.95  E-value=7.7e-28  Score=239.69  Aligned_cols=316  Identities=13%  Similarity=0.092  Sum_probs=215.3

Q ss_pred             CCCCCeEEcCCCC--CCCC-CCHHHH-H-HHhc---C-CCC----CCCCCcchHHHHHHHHHHcC-CCCCCEEEeCCHHH
Q 014594           92 RKPEDIVKIDANE--NPYG-PPPEVR-E-ALGQ---L-KFP----YIYPDPESRRLRAALAKDSG-LESDHILVGCGADE  157 (422)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~-~-al~~---~-~~~----~~y~~~~~~~lr~~la~~~~-~~~~~i~~~~G~~~  157 (422)
                      .++..++|+..+.  ++++ .+|++. + ++.+   . ...    ..|+.....+++++++++++ .++++|++++|+++
T Consensus        51 ~~g~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~la~~la~~~~~~~~~~v~~~~~gse  130 (449)
T 2cjg_A           51 ITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFARVLGDPALPHLFFVEGGAL  130 (449)
T ss_dssp             TTCCEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCCCCTTTCCCHHHHHHHHHHHHHHCCTTCCEEEEESSHHH
T ss_pred             CCCcEEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCCCcccCCHHHHHHHHHHHHhcCCCCCCEEEEeCchHH
Confidence            4566788886664  5565 478998 7 7765   2 111    23555556889999999997 56789999999999


Q ss_pred             HHHHHHHHhc---C----------C-CCEEEEcCCCchhHHHHHHH---------cCC-----EEEEecCCC--CC----
Q 014594          158 LIDLIMRCVL---D----------P-GDKIVDCPPTFTMYEFDAAV---------NGA-----AVVKVPRKS--DF----  203 (422)
Q Consensus       158 al~~~~~~l~---~----------~-gd~Vl~~~p~y~~~~~~~~~---------~g~-----~~~~v~~~~--~~----  203 (422)
                      +++.+++.+.   .          + ||+|++..|+|+.+...+..         .+.     .++.+|.++  ..    
T Consensus       131 A~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  210 (449)
T 2cjg_A          131 AVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAM  210 (449)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHH
T ss_pred             HHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhcccc
Confidence            9999998542   2          2 89999999999865432211         122     456666433  11    


Q ss_pred             ----CCCHHHHHHHhhc--CCCeEEEEeCCCCccCc-CCCHHHHHHHHc---C-CCeEEEccCCccccCCCc--hhhhhh
Q 014594          204 ----SLNVELIADAVER--EKPKCIFLTSPNNPDGS-IINDEDLLKILE---M-PILVVLDEAYTEFSGLES--RMEWVK  270 (422)
Q Consensus       204 ----~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~-~~~~e~l~~i~~---~-~~~li~Deay~~~~~~~~--~~~~~~  270 (422)
                          ..|+++|++.+++  +++++|++++++||+|. +++.+++++|++   . |+++|+||+|.+|...+.  .....+
T Consensus       211 ~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~  290 (449)
T 2cjg_A          211 AALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLD  290 (449)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHT
T ss_pred             chhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccC
Confidence                1456678888852  56788777666799995 667666666554   3 999999999998765432  122222


Q ss_pred             cCCcEEEEccChhhhccccccceeeecCHHHHHHHH-----H--hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHH
Q 014594          271 KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW-----R--AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERE  343 (422)
Q Consensus       271 ~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~-----~--~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~  343 (422)
                      ...+++   ||||.+     |+||+++++++++.+.     .  ....++.|++++.++.++|+...-.+..++++++++
T Consensus       291 ~~~di~---t~sK~l-----~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~~  362 (449)
T 2cjg_A          291 VAPDIV---AFGKKT-----QVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGK  362 (449)
T ss_dssp             CCCSEE---EECGGG-----SSEEEEECGGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CCceEE---EecCcc-----cEEEEEECHHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence            333433   689977     7999999998887521     1  123477899999999998863211116677788888


Q ss_pred             HHHHHHccC----CC-CcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHH
Q 014594          344 RLFKLLKDV----PF-LNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALM  415 (422)
Q Consensus       344 ~l~~~L~~~----~~-~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~  415 (422)
                      ++.+.|+++    +. +...++.|+|+++++++..+..++.+.|.++||.+.+++    .+++||+++   +.++++++.
T Consensus       363 ~l~~~L~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g----~~~iRi~~~~~~t~e~i~~~l  438 (449)
T 2cjg_A          363 YLRARLDELAADFPAVVLDPRGRGLMCAFSLPTTADRDELIRQLWQRAVIVLPAG----ADTVRFRPPLTVSTAEIDAAI  438 (449)
T ss_dssp             HHHHHHHHHHHHSTTTSEEEEEETTEEEEECSSHHHHHHHHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHH
T ss_pred             HHHHHHHHHHhhCCCceeeEeeccEEEEEEECChHHHHHHHHHHHHCCeEEecCC----CCEEEEECCCCCCHHHHHHHH
Confidence            888888753    43 333456788888998643346789999999999999874    589999764   344444444


Q ss_pred             HHHh
Q 014594          416 ECLM  419 (422)
Q Consensus       416 ~al~  419 (422)
                      ++|+
T Consensus       439 ~~l~  442 (449)
T 2cjg_A          439 AAVR  442 (449)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4443

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.95  E-value=2.6e-26  Score=222.64  Aligned_cols=295  Identities=16%  Similarity=0.145  Sum_probs=220.7

Q ss_pred             CHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHH
Q 014594          110 PPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDA  187 (422)
Q Consensus       110 ~~~v~~al~~~-~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~  187 (422)
                      ++++.+++.+. .....++.++..++|++++++++.+  ++++++|+++++..+++++ +++||+|+++.|+|..+...+
T Consensus        15 ~~~v~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~~~~   92 (367)
T 3nyt_A           15 KDKIDAGIQRVLRHGQYILGPEVTELEDRLADFVGAK--YCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETV   92 (367)
T ss_dssp             HHHHHHHHHHHHHHCCCSSCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHH
T ss_pred             CHHHHHHHHHHHhcCCccCChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHH
Confidence            46777777663 3323346677899999999999964  8999999999999999998 899999999999999999999


Q ss_pred             HHcCCEEEEecCCCC-CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCCc
Q 014594          188 AVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLES  264 (422)
Q Consensus       188 ~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~~  264 (422)
                      +..|++++.++.+.+ +.+|+++++++++ +++++|+   |+||||...+.+++.++++. |+++|+|++|..+. +.+.
T Consensus        93 ~~~G~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~  168 (367)
T 3nyt_A           93 ALLGAKPVYVDIDPRTYNLDPQLLEAAIT-PRTKAII---PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGK  168 (367)
T ss_dssp             HHTTCEEEEECBCTTTCSBCGGGTGGGCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTE
T ss_pred             HHcCCEEEEEecCCccCCcCHHHHHHhcC-cCCcEEE---eeCCccChhhHHHHHHHHHHcCCEEEEECccccCCeECCe
Confidence            999999999997644 8899999999996 6888888   88999999999999999987 99999999998533 2222


Q ss_pred             hhhhhhcCCcEEEEccC--hhhhccccccceeeec-CHHHHHHHHHhcC--------------CCCCcHHHHHHHHHHcc
Q 014594          265 RMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ--------------PYNVSVAAEVAACAALQ  327 (422)
Q Consensus       265 ~~~~~~~~~~~i~~~S~--SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~--------------~~~~~~~~~~aa~~~L~  327 (422)
                      .....   + ++++.||  +|.++.+|. .|++++ ++++.+.+.....              .+..+.+...++...++
T Consensus       169 ~~~~~---~-di~~~Sf~~~K~l~~~g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~  243 (367)
T 3nyt_A          169 RSCNL---S-TVACTSFFPSAPLGCYGD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLE  243 (367)
T ss_dssp             ETTSS---S-SEEEEECCTTSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHH
T ss_pred             eccCC---C-CEEEEECCCCCcCCCcCc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHH
Confidence            22211   1 4788887  899986576 888888 5778887776443              24567777777766664


Q ss_pred             CChHHH-HHHHHHHHHHHHHHHHccCCCCccc-CCC--ce--EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-C-----
Q 014594          328 NPIYLE-VKEALIKERERLFKLLKDVPFLNPY-PSY--SN--FILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-K-----  395 (422)
Q Consensus       328 ~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p~~--~~--f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~-~-----  395 (422)
                      .   ++ ..++.+++++++.+.|++++..... +..  ..  ++.+.++   +.+++.+.|.++||.++.+.. +     
T Consensus       244 ~---~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~L~~~GI~~~~~~~~~~~~~~  317 (367)
T 3nyt_A          244 I---FEEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRMD---NRESVQASLKAAGVPTAVHYPIPLNKQP  317 (367)
T ss_dssp             T---HHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEECS---SHHHHHHHHHHHTCCCBCSCSSCGGGSG
T ss_pred             H---HHHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEeC---CHHHHHHHHHHCCCceeccCCCccccCh
Confidence            3   33 5566777788888888887532221 222  11  2344543   688999999999999986542 0     


Q ss_pred             --C------------CCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          396 --E------------LKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       396 --~------------~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                        .            ....+|+++.   +.++++.+.++++..
T Consensus       318 ~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~  360 (367)
T 3nyt_A          318 AVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL  360 (367)
T ss_dssp             GGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred             hhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence              0            0247899876   456677777776653

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=99.95  E-value=8.4e-26  Score=224.86  Aligned_cols=316  Identities=13%  Similarity=0.073  Sum_probs=217.5

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCc----c---h---HHHH-HHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDP----E---S---RRLR-AALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~~----~---~---~~lr-~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      +.|+|..++++.  +|++++++.+ +.  +..+||..    +   .   .++. +.+++++|.+. ..++++|+++++..
T Consensus        46 ~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~~-~~v~~~sGs~a~~~  122 (447)
T 3h7f_A           46 DTLEMIASENFV--PRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAEF-ANVQPHSGAQANAA  122 (447)
T ss_dssp             HSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSE-EECCCSSHHHHHHH
T ss_pred             CceeEecCCCCC--CHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCCCc-eEEEeCCHHHHHHH
Confidence            468998888765  7999999976 32  22334321    1   1   2344 88888999764 23337788899999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhH-HH--H--HHHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMY-EF--D--AAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~-~~--~--~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (422)
                      ++++++++||+|+++.|+|..+ ..  .  ....+..++.++.+ +++.+|++++++.+.+.++++|++++|+||++.  
T Consensus       123 a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~i~~~~~~~~~~~--  200 (447)
T 3h7f_A          123 VLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRVL--  200 (447)
T ss_dssp             HHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHHHCCSEEEEECSSCCSCC--
T ss_pred             HHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHhcCCeEEEEcCCCCCCcc--
Confidence            9999999999999999998652 11  1  11134567777754 457899999999996568899999999999887  


Q ss_pred             CHHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCC-
Q 014594          236 NDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY-  312 (422)
Q Consensus       236 ~~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~-  312 (422)
                      +.+++.++|+. |+++|+||+|.. +.+.+.......  ...+++.|+||.+  +|+|.||+++++++++.+.....++ 
T Consensus       201 ~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~--~~di~~~s~sK~l--~G~~gG~i~~~~~~~~~l~~~~~~~~  276 (447)
T 3h7f_A          201 DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVP--HADVVSTTVHKTL--GGGRSGLIVGKQQYAKAINSAVFPGQ  276 (447)
T ss_dssp             CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTT--TCSEEEEESSGGG--CCCSCEEEEECGGGHHHHHHHHTTTT
T ss_pred             CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCC--CCcEEEecCCcCC--CCCCeEEEEECHHHHHHHhhhcCCcc
Confidence            88999999987 999999999753 222111111111  2237899999976  5889999999999988887765543 


Q ss_pred             --CCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccC-----CCCcc-cCCCceEEEEEeCC-CCCHHHHHH
Q 014594          313 --NVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDV-----PFLNP-YPSYSNFILCEVTS-GMDAKKLKD  380 (422)
Q Consensus       313 --~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~-----~~~~~-~p~~~~f~~~~~~~-~~~~~~~~~  380 (422)
                        +.+...+.++..++..  .++.+ .++++.++++++.+.|++.     ++..+ .+..++++|+++.. +.+.+.+.+
T Consensus       277 ~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (447)
T 3h7f_A          277 QGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPLDGQAAED  356 (447)
T ss_dssp             CSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSSCCHHHHHH
T ss_pred             cCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCCCCHHHHHH
Confidence              2233334444444332  33455 8889999999999999887     53322 23577889998853 457777888


Q ss_pred             HHHhCCcEEE----eCC--CCCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014594          381 DLAKMGVMIR----HYN--NKELKGYVRVSVG-------KPEHTDALMECLMH  420 (422)
Q Consensus       381 ~L~~~gI~v~----~~~--~~~~~~~iRis~~-------~~~~~~~l~~al~~  420 (422)
                      .|.++||.++    ++.  .+..++++||++.       ++++++++.+++++
T Consensus       357 ~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~  409 (447)
T 3h7f_A          357 LLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIAT  409 (447)
T ss_dssp             HHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHH
T ss_pred             HHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHH
Confidence            8888899998    552  2445688999873       34566666666543

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.95  E-value=1.9e-26  Score=223.99  Aligned_cols=294  Identities=14%  Similarity=0.156  Sum_probs=214.9

Q ss_pred             CHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHH
Q 014594          110 PPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDA  187 (422)
Q Consensus       110 ~~~v~~al~~~-~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~  187 (422)
                      ++++.+++.+. .....++.++..++|++++++++.+  ++++++|+++++..+++++ +++||+|+++.|+|..+...+
T Consensus        16 ~~~~~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~   93 (373)
T 3frk_A           16 EYEIKFKFEEIYKRNWFILGDEDKKFEQEFADYCNVN--YCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATALAV   93 (373)
T ss_dssp             HHHHHHHHHHHHHHTCCSSSHHHHHHHHHHHHHHTSS--EEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHHHHH
T ss_pred             CHHHHHHHHHHHHCCCccCCchHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH
Confidence            46677777653 2223346677899999999999964  8999999999999999999 899999999999999999888


Q ss_pred             HHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCCc
Q 014594          188 AVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLES  264 (422)
Q Consensus       188 ~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~~  264 (422)
                      +..|++++.++.+ +++.+|+++++++++ +++++|+   |+||||...+.+++.++++. |+++|+|++|..+. .+..
T Consensus        94 ~~~g~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~  169 (373)
T 3frk_A           94 SYTGAKPIFVEPDIRTYNIDPSLIESAIT-EKTKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGM  169 (373)
T ss_dssp             HHHSCEEEEECEETTTTEECGGGTGGGCC-TTEEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTE
T ss_pred             HHcCCEEEEEeccccccCcCHHHHHHhcC-CCCeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECCcccCCEECCE
Confidence            9999999999965 567899999999997 5888888   77899999999999999998 99999999998643 2222


Q ss_pred             hhhhhhcCCcEEEEccCh--hhhccccccceeeecC-HHHHHHHHHhcC--------------CCCCcHHHHHHHHHHcc
Q 014594          265 RMEWVKKHDNLIVLRTFS--KRAGLAGLRVGYGAFP-LSIIEYLWRAKQ--------------PYNVSVAAEVAACAALQ  327 (422)
Q Consensus       265 ~~~~~~~~~~~i~~~S~S--K~~~~~G~r~G~i~~~-~~~~~~l~~~~~--------------~~~~~~~~~~aa~~~L~  327 (422)
                      .....    ..+++.||+  |.++..| +.|+++++ +++.+.+.....              .+.++.+..+++...++
T Consensus       170 ~~~~~----~d~~~~S~~~~K~l~~~g-~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~  244 (373)
T 3frk_A          170 KVGSL----GDAAGFSFYPAKNLGSLG-DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKLK  244 (373)
T ss_dssp             ETTSS----SSEEEEECCTTSSSCCSS-SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHHH
T ss_pred             ecccc----ccEEEEeCcCCCccCccc-eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHHH
Confidence            11111    137788877  8776324 47888875 567776665432              12345555554444443


Q ss_pred             CChHHH-HHHHHHHHHHHHHHHHccCCCCccc--CCCc--eE--EEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-C----
Q 014594          328 NPIYLE-VKEALIKERERLFKLLKDVPFLNPY--PSYS--NF--ILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-K----  395 (422)
Q Consensus       328 ~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~--p~~~--~f--~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~-~----  395 (422)
                         .++ ..++.+++.+++.+.|++++ +.+.  +...  .+  +.+..   .+.+++.+.|.++||.++.+.. +    
T Consensus       245 ---~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~L~~~gI~v~~~~~~~~~~~  317 (373)
T 3frk_A          245 ---YLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRS---EKRDELQKYLNNNGIGTLIHYPIPIHLQ  317 (373)
T ss_dssp             ---THHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEE---SSHHHHHHHHHHTTBCCBCSCSSCGGGS
T ss_pred             ---HHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEe---CCHHHHHHHHHHCCCCcccCcCCccccC
Confidence               233 66777888889999998887 4432  1222  22  22333   2788999999999999986551 0    


Q ss_pred             -----------CC-------CCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          396 -----------EL-------KGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       396 -----------~~-------~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                                 ..       .+.+|+++.   +.++++++.+++++.
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~  364 (373)
T 3frk_A          318 QAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAW  364 (373)
T ss_dssp             GGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTC
T ss_pred             hHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHH
Confidence                       00       167999986   566777777777653

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=99.95  E-value=1.2e-25  Score=221.70  Aligned_cols=279  Identities=20%  Similarity=0.174  Sum_probs=198.6

Q ss_pred             CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEecCC
Q 014594          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRK  200 (422)
Q Consensus       125 ~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~  200 (422)
                      +|+++...+|++++++++|.+  ..++++++++++..++++++++||+|+++.|+|..+..    .++..|++++.++.+
T Consensus        78 r~~~p~~~~le~~lA~l~g~~--~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~  155 (430)
T 3ri6_A           78 RSSNPTVEDLEQRLKNLTGAL--GVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVM  155 (430)
T ss_dssp             --CCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred             CCCCHHHHHHHHHHHHHHCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC
Confidence            456777899999999999964  35666677899999999999999999999999987766    566799999999853


Q ss_pred             CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEc
Q 014594          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (422)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~  279 (422)
                           |+++++++++ +++++|++++|+||||.+++.+++.++++. |+++|+|++|....... ..    ..+.++++.
T Consensus       156 -----d~~~l~~ai~-~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~~~-~~----~~g~div~~  224 (430)
T 3ri6_A          156 -----DSLAVEHACD-ETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYLLE-AK----RLGVDIEVL  224 (430)
T ss_dssp             -----CHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTTCC-GG----GGTCSEEEE
T ss_pred             -----CHHHHHHhhC-CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCC-hH----HcCCEEEEE
Confidence                 8999999997 689999999999999999999999999997 99999999998544311 11    234458999


Q ss_pred             cChhhhccccccceeeec---CHHH------------------HHHHHHh---cCCCCCcHHHHHHHHHHccCChHHH-H
Q 014594          280 TFSKRAGLAGLRVGYGAF---PLSI------------------IEYLWRA---KQPYNVSVAAEVAACAALQNPIYLE-V  334 (422)
Q Consensus       280 S~SK~~~~~G~r~G~i~~---~~~~------------------~~~l~~~---~~~~~~~~~~~~aa~~~L~~~~~~~-~  334 (422)
                      |+||.++.+|..+|.+++   +.++                  ++++...   .....+++.....+...+   +.+. +
T Consensus       225 S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l---~~l~~r  301 (430)
T 3ri6_A          225 SSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLGL---ETMALR  301 (430)
T ss_dssp             ECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHH---HHHHHH
T ss_pred             CCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhh---hhHHHH
Confidence            999999866654444443   2111                  2222211   112334555444333333   4445 6


Q ss_pred             HHHHHHHHHHHHHHHccCCCCc-c-cCC---------------Cce-EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-
Q 014594          335 KEALIKERERLFKLLKDVPFLN-P-YPS---------------YSN-FILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-  395 (422)
Q Consensus       335 ~~~~~~~~~~l~~~L~~~~~~~-~-~p~---------------~~~-f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~-  395 (422)
                      .++..++.+.+.+.|++.+.+. + +|.               .|. .+|+++++..++.+|.+.|...++.+..|+.. 
T Consensus       302 ~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~~~~~~~~~~l~~~~~~~s~G~~~s  381 (430)
T 3ri6_A          302 IERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESKEASYRFMDALKLIRRATNIHDNKS  381 (430)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHHHHHHHHHHCSSSEECSCCSCSSC
T ss_pred             HHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCHHHHHHHHHhCCcceecCCCCCCCc
Confidence            6778899999999999887654 3 343               144 89999973334556666665445545444321 


Q ss_pred             ----------------------CCCCeEEEEecChhhHHHHHHHHhh
Q 014594          396 ----------------------ELKGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       396 ----------------------~~~~~iRis~~~~~~~~~l~~al~~  420 (422)
                                            ..+++||||++.+. .++|.+.|++
T Consensus       382 li~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~E~-~~dl~~dl~~  427 (430)
T 3ri6_A          382 LILSPYHVIYALNSHEERLKLEISPAMMRLSVGIEE-IEDLKEDILQ  427 (430)
T ss_dssp             EEECTGGGC---------CGGGSCTTEEEEECCSSC-HHHHHHHHHH
T ss_pred             eeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCC-HHHHHHHHHH
Confidence                                  13679999999765 4667666654

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.94  E-value=1.6e-25  Score=217.87  Aligned_cols=309  Identities=17%  Similarity=0.116  Sum_probs=224.1

Q ss_pred             cCCCCCCCCCCHHHHHHHhc-CCCCCCCC-CcchHHHHHHH-HHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEE
Q 014594          100 IDANENPYGPPPEVREALGQ-LKFPYIYP-DPESRRLRAAL-AKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVD  175 (422)
Q Consensus       100 l~~~~~~~~~~~~v~~al~~-~~~~~~y~-~~~~~~lr~~l-a~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~  175 (422)
                      +..+++++++++++.+++.+ +..+..++ .+...+|++++ ++++| ..+++++++|+++++.+++.++ +++||+|++
T Consensus         5 i~~~~p~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~l~~~~~a~~~g-~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~   83 (377)
T 3ju7_A            5 IPFLRASTVPVIEYLDELKEIDASHIYTNYGPINQRFEQTIMSGFFQ-NRGAVTTVANATLGLMAAIQLKKRKKGKYALM   83 (377)
T ss_dssp             BCSCCCCCCCGGGGHHHHHHHHHHTCCSSSCHHHHHHHHHHHHHTST-TCSEEEEESCHHHHHHHHHHHHSCTTCCEEEE
T ss_pred             eeccCCCCCCcHHHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHhC-CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEE
Confidence            33457889888888888876 33333333 55678999999 99999 3568999999999999999988 899999999


Q ss_pred             cCCCchhHHHHHHHcCCEEEEecCC-CCCCCCHHHHHHHhhcCC--CeEEEEeCCCCccCcCCCHHHHHHHHcCCCeEEE
Q 014594          176 CPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREK--PKCIFLTSPNNPDGSIINDEDLLKILEMPILVVL  252 (422)
Q Consensus       176 ~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~--~~~i~l~~p~NPtG~~~~~e~l~~i~~~~~~li~  252 (422)
                      +.|+|..+...++..|++++.++.+ +++.+|++++++++.+++  +|+|+   |+||+|...+.+++.++++.|+++|+
T Consensus        84 ~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~~~~i~~la~~~~~vi~  160 (377)
T 3ju7_A           84 PSFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMNLEEYEELEKKGVPVVV  160 (377)
T ss_dssp             ESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCCCHHHHHHHHTTCCBEE
T ss_pred             CCCCcHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccCHHHHHHHHhcCCEEEE
Confidence            9999999999999999999999975 578999999999983345  89888   78899999999999999988899999


Q ss_pred             ccCCccccC-CCchhhhhhcCCcEEEEccC--hhhhccccccceeeec-CHHHHHHHHHhcC--------------CCCC
Q 014594          253 DEAYTEFSG-LESRMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ--------------PYNV  314 (422)
Q Consensus       253 Deay~~~~~-~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~--------------~~~~  314 (422)
                      |++|..... .+....  .... .+.+.||  +|.++. | +.|++++ ++++.+++.....              .+.+
T Consensus       161 D~a~a~g~~~~~~~~g--~~~~-d~~~~S~~~~K~l~~-g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~  235 (377)
T 3ju7_A          161 DAAPGFGLMNGGMHYG--QDFS-GMIIYSFHATKPFGI-G-EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKM  235 (377)
T ss_dssp             ECTTCTTCEETTEETT--TTCS-SEEEEECBTTSSSCC-B-SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCC
T ss_pred             ECCCccCCeECCEecc--CCCC-cEEEEECCCCCcCCC-C-CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCC
Confidence            999985431 111110  0111 2445554  698874 5 6777776 5778887776543              2345


Q ss_pred             cHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCc--ccCCCc-----eEEEEEeCCCCCHHHHHHHHHhCC
Q 014594          315 SVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLN--PYPSYS-----NFILCEVTSGMDAKKLKDDLAKMG  386 (422)
Q Consensus       315 ~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~-----~f~~~~~~~~~~~~~~~~~L~~~g  386 (422)
                      +.+.++.+...++   .++ ..++.+++++++.+.|++++.+.  ..+..+     .|+.+.+++..+.+++.+.|.++|
T Consensus       236 ~~~~aa~~~~~l~---~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g  312 (377)
T 3ju7_A          236 SEYAAAIGIATMK---KWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEVRNKQVIEDLKKQK  312 (377)
T ss_dssp             CHHHHHHHHHHHH---THHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTSCHHHHHHHHHTTT
T ss_pred             CHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCChhhHHHHHHHHHHCC
Confidence            6666665555553   334 66677778888888888876431  222222     245566665556899999999999


Q ss_pred             cEEEeCCCC--------C------C-------CCeEEEEec---ChhhHHHHHHHHhh
Q 014594          387 VMIRHYNNK--------E------L-------KGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       387 I~v~~~~~~--------~------~-------~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      |.++.+...        .      .       .+.+|+.+.   +.++++++.+++++
T Consensus       313 I~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~  370 (377)
T 3ju7_A          313 IEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQ  370 (377)
T ss_dssp             BCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC
T ss_pred             CceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHH
Confidence            999865420        0      0       246899876   35566666666654

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=99.94  E-value=1.3e-25  Score=220.70  Aligned_cols=279  Identities=10%  Similarity=0.061  Sum_probs=199.9

Q ss_pred             CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEecCCC
Q 014594          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKS  201 (422)
Q Consensus       126 y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~  201 (422)
                      |+++...++|+++|+++|.+  ++++++|++++++.++.+++++||+|+++.|.|......+    +..|+++..++.+ 
T Consensus        79 ~~~p~~~~le~~lA~l~g~~--~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~-  155 (415)
T 2fq6_A           79 RGTLTHFSLQQAMCELEGGA--GCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPL-  155 (415)
T ss_dssp             TCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTT-
T ss_pred             CCCchHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCC-
Confidence            45566789999999999963  5777789999999999999999999999999998665443    3479999999742 


Q ss_pred             CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCCchhhhhhcCCcEEEE
Q 014594          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (422)
Q Consensus       202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~  278 (422)
                          |+++++++++ +++|+|++++|+||||.+++.+++.++++.   |+++|+|++|..+.... ..    ..+.++++
T Consensus       156 ----d~~~le~ai~-~~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~-p~----~~g~Div~  225 (415)
T 2fq6_A          156 ----IGADIVKHLQ-PNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFK-AL----DFGIDVSI  225 (415)
T ss_dssp             ----CGGGGGGGCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSC-GG----GGTCSEEE
T ss_pred             ----CHHHHHHhhc-cCCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccCC-cc----ccCCeEEE
Confidence                7899999997 689999999999999999999999999975   89999999998653221 11    23456899


Q ss_pred             ccChhhhcccccc-ceeeecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC
Q 014594          279 RTFSKRAGLAGLR-VGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF  354 (422)
Q Consensus       279 ~S~SK~~~~~G~r-~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~  354 (422)
                      .|++|.++.+|.+ +||+++++++++.+......  ...++....++...+   +++. ..++..++.+.+.+.|++.+.
T Consensus       226 ~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l---~~l~~r~~~~~~n~~~l~~~L~~~~~  302 (415)
T 2fq6_A          226 QAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGL---RTLGVRLRQHHESSLKVAEWLAEHPQ  302 (415)
T ss_dssp             EETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred             EeCccccCCCCCceEEEEEeCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            9999999988755 69999988888877654432  334555444444444   3444 666778888888898887653


Q ss_pred             Cc-c-cC----------------CCceEEEEEeCCC---CCHHHHHHHHHhCCcEEEeCCC-------------------
Q 014594          355 LN-P-YP----------------SYSNFILCEVTSG---MDAKKLKDDLAKMGVMIRHYNN-------------------  394 (422)
Q Consensus       355 ~~-~-~p----------------~~~~f~~~~~~~~---~~~~~~~~~L~~~gI~v~~~~~-------------------  394 (422)
                      +. + +|                ..+..+++.++++   .+.+.+.+.|...++.++.|+.                   
T Consensus       303 v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~~  382 (415)
T 2fq6_A          303 VARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQG  382 (415)
T ss_dssp             EEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCTTC
T ss_pred             eeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHHHHHhCCcCeEeccCCCCceeEEecCCCccccccchh
Confidence            32 1 22                2467888999743   1333444443333344433311                   


Q ss_pred             -CC-CCCeEEEEecChh---hHHHHHHHHhh
Q 014594          395 -KE-LKGYVRVSVGKPE---HTDALMECLMH  420 (422)
Q Consensus       395 -~~-~~~~iRis~~~~~---~~~~l~~al~~  420 (422)
                       .+ .++.||||++...   .+++|.++|+.
T Consensus       383 ~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~  413 (415)
T 2fq6_A          383 EIDFSGTLIRLHIGLEDVDDLIADLDAGFAR  413 (415)
T ss_dssp             CCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred             hcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence             11 2479999998643   34555666554

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.94  E-value=1.1e-25  Score=221.08  Aligned_cols=267  Identities=15%  Similarity=0.098  Sum_probs=201.2

Q ss_pred             HHHHHHHhcC---------CCCCCCCCcchHHHHHHHHHHcCCCCCCEEE--eCCHHHHHHHHHHHhcCCCCEEEEcC-C
Q 014594          111 PEVREALGQL---------KFPYIYPDPESRRLRAALAKDSGLESDHILV--GCGADELIDLIMRCVLDPGDKIVDCP-P  178 (422)
Q Consensus       111 ~~v~~al~~~---------~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~--~~G~~~al~~~~~~l~~~gd~Vl~~~-p  178 (422)
                      ++|++++.+.         ..++.|++.+..+|++.+++++|.+.. ++.  ++|+++++..++.+++++||+|+++. |
T Consensus        46 ~~Vl~A~~~~~~~~~~~~~~~gy~y~~~~~~~Le~~lA~l~g~e~a-lv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~  124 (427)
T 3i16_A           46 LKVLNAFQEERISEAHFTNSSGYGYGDIGRDSLDAVYARVFNTESA-LVRPHFVNGTHALGAALFGNLRPGNTMLSVCGE  124 (427)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHTCSEE-EEETTCCSHHHHHHHHHHHHCCTTCEEEESSSS
T ss_pred             HHHHHHHHHhchhHHhcCCCCCCCCCHHHHHHHHHHHHHHhCCcce-EEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            5677777542         123567888889999999999997533 443  78889999999999999999999999 9


Q ss_pred             CchhHHHH-----------HHHcCCEEEEecCCCCCCCCHHHHHHHhhc-CCCeEEEEeC----CCCccCcCCCHHHHHH
Q 014594          179 TFTMYEFD-----------AAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTS----PNNPDGSIINDEDLLK  242 (422)
Q Consensus       179 ~y~~~~~~-----------~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~----p~NPtG~~~~~e~l~~  242 (422)
                      .|..+...           ++..|++++.++.++++.+|++++++++++ +++|+|++++    |+||||.+.+.+++.+
T Consensus       125 ~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~  204 (427)
T 3i16_A          125 PYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVD  204 (427)
T ss_dssp             CCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHH
T ss_pred             ccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHH
Confidence            99876633           345799999999877778999999999974 6899999998    9999999999999999


Q ss_pred             HHcC---CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcccc-ccceeeecCHHHHHHHHHhcCC--CC--C
Q 014594          243 ILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--YN--V  314 (422)
Q Consensus       243 i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~~~~--~~--~  314 (422)
                      +++.   |+++++|++|..+.......    ..+.+++++|+||.+|.+| .+.||+++++++++++......  .+  .
T Consensus       205 la~~~~~g~~livD~a~~~~~~~~~p~----~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~g~~~  280 (427)
T 3i16_A          205 CVKNIRKDIICFVDNCYGEFMDTKEPT----DVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGEC  280 (427)
T ss_dssp             HHHHHCTTSEEEEECTTTTTSSSSCGG----GGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGC
T ss_pred             HHHHhCCCCEEEEECCCccccccCCcc----ccCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCccCccC
Confidence            9975   99999999999876332222    1234589999999998655 6789999999999999874332  21  1


Q ss_pred             cH-HHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCce-----EEEEEeCCCCCHHHHHHHHHhC
Q 014594          315 SV-AAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSN-----FILCEVTSGMDAKKLKDDLAKM  385 (422)
Q Consensus       315 ~~-~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~-----f~~~~~~~~~~~~~~~~~L~~~  385 (422)
                      ++ +.  ++..+++.-..+. ++++..+++.++.+.|+++|+ .++|+.+.     .+.+.+.+.....+|++.|...
T Consensus       281 ~~~~~--~a~~~l~gl~~~~~r~~~~~~~a~~la~~L~~~g~-~V~p~~~~~~~~~i~~i~l~~~~~~~~f~~~l~~~  355 (427)
T 3i16_A          281 GSTFG--VVRSMYQGLFLAPHISMEALKGAILCSRIMELAGF-EVMPKYDEKRSDIIQSIKFNDKDKLIEFCKGIQTG  355 (427)
T ss_dssp             CCCTT--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-EEESCTTSCCSSSCEEEECSSHHHHHHHHHHHHHT
T ss_pred             CccHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-eecCCCCCCCccEEEEEEECCHHHHHHHHHHHhhc
Confidence            11 11  1122222223334 778889999999999999986 55666554     7778885333456778888765

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=99.94  E-value=7.5e-25  Score=218.52  Aligned_cols=283  Identities=13%  Similarity=0.059  Sum_probs=204.8

Q ss_pred             HHHHHHHHHHcCCCCCCEEEeCCHH-HHHHHHHHHhcC--CCCEEEEcCCCchhHHHHHHHcCCEEEEecC---CCCCCC
Q 014594          132 RRLRAALAKDSGLESDHILVGCGAD-ELIDLIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSL  205 (422)
Q Consensus       132 ~~lr~~la~~~~~~~~~i~~~~G~~-~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~~  205 (422)
                      .++++++++++|++++ +++|+|++ .++..++.++..  +|+.|+++.+.|..+...++..|++++.++.   ++++.+
T Consensus       136 ~~~~~~la~~~g~~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~  214 (456)
T 2z67_A          136 NKILESFFKQLGLNVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYV  214 (456)
T ss_dssp             HHHHHHHHHHTTCCCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEEC
T ss_pred             HHHHHHHHHHcCCCCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEeccCCCCCc
Confidence            4588999999998776 99999999 455545554433  6788999999999999888999999999885   567789


Q ss_pred             CHHHHHHHh-hc---CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCC--chhhhhhcCCcEEEE
Q 014594          206 NVELIADAV-ER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE--SRMEWVKKHDNLIVL  278 (422)
Q Consensus       206 d~~~l~~~i-~~---~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~--~~~~~~~~~~~~i~~  278 (422)
                      |+++|++++ +.   .++.+|++++||||||.+.+.++|.++++. |+++++|++|..+..+.  ........ +..+++
T Consensus       215 d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~-~~D~~~  293 (456)
T 2z67_A          215 PVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY-RVDAVV  293 (456)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS-CCSEEE
T ss_pred             CHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCC-CCCEEE
Confidence            999999999 42   477888889999999999999999999998 99999999998765311  11111111 334678


Q ss_pred             ccChhhhccccccceeeec-CHHHHHHHHHhcCCCC--CcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCC-
Q 014594          279 RTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYN--VSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVP-  353 (422)
Q Consensus       279 ~S~SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~~~~--~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~-  353 (422)
                      .|++|.++ ++.++||+++ ++++++.+......+.  .+.+.+.++...+.. ++++ +.++..++++++.+.|++++ 
T Consensus       294 ~s~hK~~~-~p~g~G~l~~~~~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~~-~~~~~~~~~~~~~~~~l~~~L~~~~~  371 (456)
T 2z67_A          294 SSSDKNLL-TPIGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMGS-KNYLELVKNQKNSKKLLDELLNDLSK  371 (456)
T ss_dssp             EEHHHHHC-CCSSCEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EcCCCCcC-CCCCeEEEEEcCHHHHhhcCcCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            89999554 6789999999 6788887743322221  224445555555543 3445 88899999999999998872 


Q ss_pred             --CCcccCCCceEEEEEe--CCCCCHHHHHHHHHhCCc---EEE------eCCC--CCCCCeEEEEec---ChhhHHHHH
Q 014594          354 --FLNPYPSYSNFILCEV--TSGMDAKKLKDDLAKMGV---MIR------HYNN--KELKGYVRVSVG---KPEHTDALM  415 (422)
Q Consensus       354 --~~~~~p~~~~f~~~~~--~~~~~~~~~~~~L~~~gI---~v~------~~~~--~~~~~~iRis~~---~~~~~~~l~  415 (422)
                        +..+.++. +++++.+  ++  ...++.+.|.++||   .+.      .|..  ....+++|++++   +.++++++.
T Consensus       372 ~~g~~v~~~~-~~v~~~~~~~~--~~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l  448 (456)
T 2z67_A          372 KTGGKFLDVE-SPIASCISVNS--DPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSV  448 (456)
T ss_dssp             HSSCCBCCCC-CSSEEEEECSS--CHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHH
T ss_pred             ccCCEecCCC-CeEEEEEeccc--HHHHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhhhhcCCCHHHHHHHH
Confidence              24444444 7777777  42  25788999998875   443      1111  112479999976   466677777


Q ss_pred             HHHhhh
Q 014594          416 ECLMHL  421 (422)
Q Consensus       416 ~al~~l  421 (422)
                      ++|+++
T Consensus       449 ~~L~~~  454 (456)
T 2z67_A          449 SKLEKI  454 (456)
T ss_dssp             HHHHTC
T ss_pred             HHHHHH
Confidence            777653

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=99.93  E-value=1.4e-24  Score=212.64  Aligned_cols=278  Identities=15%  Similarity=0.107  Sum_probs=199.5

Q ss_pred             CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH-----HHHcCCEEEEec
Q 014594          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD-----AAVNGAAVVKVP  198 (422)
Q Consensus       124 ~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-----~~~~g~~~~~v~  198 (422)
                      .+|+++...+|+++++++++.+  ++++++++++|+..+ ..++++||+|+++.|+|......     .+..|++++.++
T Consensus        62 ~r~~~p~~~~l~~~la~l~g~~--~~~~~~sG~~Ai~~~-~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~  138 (400)
T 3nmy_A           62 SRTHNPTRFAYERCVAALEGGT--RAFAFASGMAATSTV-MELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVD  138 (400)
T ss_dssp             TTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHH-HTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEEC
T ss_pred             ccCCCHHHHHHHHHHHHHhCCC--CEEEecCHHHHHHHH-HHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEEC
Confidence            3456677889999999999864  677777779999984 55889999999999999844433     334699999998


Q ss_pred             CCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEE
Q 014594          199 RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIV  277 (422)
Q Consensus       199 ~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~  277 (422)
                      .+     |+++++++++ +++++|++++|+||||.+++.+++.++|+. |+++|+||+|....... ..    ..+.+++
T Consensus       139 ~~-----d~~~l~~~i~-~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~-~~----~~g~div  207 (400)
T 3nmy_A          139 LT-----DPAAFKAAIR-ADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQR-PL----SLGADLV  207 (400)
T ss_dssp             TT-----SHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCC-GG----GGTCSEE
T ss_pred             CC-----CHHHHHHHhc-cCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCC-hh----hcCCcEE
Confidence            53     8999999997 689999999999999999999999999987 99999999997432211 11    2245689


Q ss_pred             EccChhhhcccccccee--ee-cCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHcc
Q 014594          278 LRTFSKRAGLAGLRVGY--GA-FPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKD  351 (422)
Q Consensus       278 ~~S~SK~~~~~G~r~G~--i~-~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~  351 (422)
                      +.|+||.++.+|.++|.  ++ .++++++.+......  ...++....++...++.   +. +.++..++.+.+.+.|++
T Consensus       208 ~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~---l~~r~~~~~~~a~~l~~~L~~  284 (400)
T 3nmy_A          208 VHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGLKT---LPLRMRAHCENALALAQWLET  284 (400)
T ss_dssp             EEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHTT
T ss_pred             EecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH---HHHHHHHHHHHHHHHHHHHHc
Confidence            99999999878777755  33 477888887655443  45677777666666643   44 667778889999999988


Q ss_pred             CCCCc-c-cC----------------CCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCC------------------
Q 014594          352 VPFLN-P-YP----------------SYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNN------------------  394 (422)
Q Consensus       352 ~~~~~-~-~p----------------~~~~f~~~~~~~~-~~~~~~~~~L~~~gI~v~~~~~------------------  394 (422)
                      .+.+. + +|                ..|.+++++++.+ .....|.+.|.-.++.+..|+.                  
T Consensus       285 ~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~  364 (400)
T 3nmy_A          285 HPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPVA  364 (400)
T ss_dssp             CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTTTSCHH
T ss_pred             CCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHHHHHHHHcCCcceEecCCCCCcceeeCccccccccCCHH
Confidence            76543 2 22                2467899999632 1234445554433333332221                  


Q ss_pred             -----CCCCCeEEEEecChhhHHHHHHHHh
Q 014594          395 -----KELKGYVRVSVGKPEHTDALMECLM  419 (422)
Q Consensus       395 -----~~~~~~iRis~~~~~~~~~l~~al~  419 (422)
                           .-.++.+|+|++.+.. ++|.+.|+
T Consensus       365 ~~~~~gi~~~liRlsvGle~~-~dli~dl~  393 (400)
T 3nmy_A          365 RREQLGISDALVRLSVGIEDL-GDLRGDLE  393 (400)
T ss_dssp             HHHHHTCCTTEEEEECCSSCH-HHHHHHHH
T ss_pred             HHHhcCCCcCeEEEEeCcCCH-HHHHHHHH
Confidence                 0125799999997543 44444443

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.93  E-value=3e-25  Score=217.24  Aligned_cols=265  Identities=15%  Similarity=0.150  Sum_probs=200.3

Q ss_pred             HHHHHHHhcC---------CCCCCCCCcchHHHHHHHHHHcCCCCCCEEE---eCCHHHHHHHHHHHhcCCCCEEEEcC-
Q 014594          111 PEVREALGQL---------KFPYIYPDPESRRLRAALAKDSGLESDHILV---GCGADELIDLIMRCVLDPGDKIVDCP-  177 (422)
Q Consensus       111 ~~v~~al~~~---------~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~---~~G~~~al~~~~~~l~~~gd~Vl~~~-  177 (422)
                      .+|++++.+.         ..++.|++.+..+|++.+++++|.+  ..++   ++|+++++..++.+++++||+|+++. 
T Consensus        32 ~~vl~a~~~~~~~~~~~~~~~~~~y~~~~~~~Le~~lA~l~g~e--~alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~  109 (409)
T 3jzl_A           32 AKVLDAFQENKVSDFHFHPSTGYGYDDEGRDTLERVYATVFKTE--AALVRPQIISGTHAISTVLFGILRPDDELLYITG  109 (409)
T ss_dssp             HHHHHHHHHTTCCGGGGCCCCTTCTTCHHHHHHHHHHHHHHTCS--EEEEETTSCSHHHHHHHHHHHHCCTTCEEEECSS
T ss_pred             HHHHHHHHHhhhhhhccCCCcCCCCChhHHHHHHHHHHHHhCCC--cEEEECCCccHHHHHHHHHHHhcCCCCEEEEeCC
Confidence            4566666542         1235678888899999999999964  3444   88999999999999999999999998 


Q ss_pred             CCchhHHHH----------HHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeC----CCCccCcCCCHHHHHHH
Q 014594          178 PTFTMYEFD----------AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS----PNNPDGSIINDEDLLKI  243 (422)
Q Consensus       178 p~y~~~~~~----------~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~----p~NPtG~~~~~e~l~~i  243 (422)
                      |.|..+...          ++..|++++.++.++++.+|+++++++++ +++|+|++++    |+||||.+.+.+++.++
T Consensus       110 ~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~-~~tklV~i~~s~g~p~nptg~v~~l~~I~~l  188 (409)
T 3jzl_A          110 QPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMT-PKTKMIGIQRSRGYADRPSFTIEKIKEMIVF  188 (409)
T ss_dssp             SCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCC-TTEEEEEEECSCTTSSSCCCCHHHHHHHHHH
T ss_pred             CCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhcc-CCCeEEEEECCCCCCCCCcCccccHHHHHHH
Confidence            999877643          35579999999987778899999999997 6899999999    99999999999999999


Q ss_pred             HcC---CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcccc-ccceeeecCHHHHHHHHHhcCC--C----C
Q 014594          244 LEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--Y----N  313 (422)
Q Consensus       244 ~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~~~~--~----~  313 (422)
                      ++.   |+++++|++|..+.......    ..+.+++++|+||.+|.+| .+.||+++++++++++......  +    +
T Consensus       189 a~~~~~~~~livD~a~~~~~~~~~p~----~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~g  264 (409)
T 3jzl_A          189 VKNINPEVIVFVDNCYGEFVEYQEPP----EVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAG  264 (409)
T ss_dssp             HHHHCTTCEEEEECTTCTTTSSCCSG----GGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGGCC
T ss_pred             HHhhCCCCEEEEeCCcccccccCCcc----ccCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhcccccccccc
Confidence            975   89999999999876322222    1234589999999998655 4469999999999999874322  1    1


Q ss_pred             CcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCce-----EEEEEeCCCCCHHHHHHHHHhCC
Q 014594          314 VSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSN-----FILCEVTSGMDAKKLKDDLAKMG  386 (422)
Q Consensus       314 ~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~-----f~~~~~~~~~~~~~~~~~L~~~g  386 (422)
                      .......++...+   .... ++++..+++.++.+.|+++|+ .++|..+.     .+.+.+.+.....++++.|.+..
T Consensus       265 ~~~~~~~~~l~gl---~~~~~r~~~~~~~a~~la~~L~~~g~-~v~p~~~~~~~~~i~~i~l~~~~~~~~~~~~L~~~~  339 (409)
T 3jzl_A          265 ASLYSLLEMYQGF---FLAPHVTAQAIKGARFTAAMLAEFGV-EADPVWDAPRTDLIQSVSFHNKEKMVAFAQAIQAAS  339 (409)
T ss_dssp             CCTTCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTTC-EEESCTTSCCSSSCCEEECSCHHHHHHHHHHHHHTS
T ss_pred             ccHHHHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHhCCC-cccCCCCCCCccEEEEEEeCCHHHHHHHHHHHHhcC
Confidence            1111122333333   2234 777888999999999999986 44555443     66778764445567888888654

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.93  E-value=1.8e-25  Score=222.27  Aligned_cols=275  Identities=12%  Similarity=-0.006  Sum_probs=191.3

Q ss_pred             CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCC-
Q 014594          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSD-  202 (422)
Q Consensus       126 y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~-  202 (422)
                      ++.....++++++++ +|.+ +++++++|+++++..++++++++||+|+++.|+|..+...+...|++++.++.  +++ 
T Consensus        54 ~~~~~~~~~~~~la~-~g~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~  131 (446)
T 2x3l_A           54 HPEEVILKSMKQVEK-HSDY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIETHQSPLT  131 (446)
T ss_dssp             SCSSHHHHHHHHHCS-CTTE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECEEEECTTT
T ss_pred             CcchHHHHHHHHHHh-cCCC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEeCeecccc
Confidence            355567899999999 9976 78999999999999999999999999999999999999888889999999986  544 


Q ss_pred             ---CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEE
Q 014594          203 ---FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIV  277 (422)
Q Consensus       203 ---~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~  277 (422)
                         +.+|++++   +. ++++++++++ .|+||.+++.+++.++|+. |+++|+||+|.. +.+.+...... ..+..++
T Consensus       132 ~~~~~~d~~~l---~~-~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~-~~g~Di~  205 (446)
T 2x3l_A          132 NHYNKVNLSRL---NN-DGHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTL-NYQADYV  205 (446)
T ss_dssp             SSEEEEEC-----------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGG-GGTCSEE
T ss_pred             CcCCCCCHHHH---cC-CCceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChH-HcCCCEE
Confidence               45788877   33 6799999999 5559999999999999987 999999999986 22222111111 1123489


Q ss_pred             EccChhhhccccccceeeecCHHHHH--HHHH---hcCCCCCcHHHHHHHHHHc---cCChHHHHHHHHHHHHHHHHHHH
Q 014594          278 LRTFSKRAGLAGLRVGYGAFPLSIIE--YLWR---AKQPYNVSVAAEVAACAAL---QNPIYLEVKEALIKERERLFKLL  349 (422)
Q Consensus       278 ~~S~SK~~~~~G~r~G~i~~~~~~~~--~l~~---~~~~~~~~~~~~~aa~~~L---~~~~~~~~~~~~~~~~~~l~~~L  349 (422)
                      +.|+||.++ ++.++||+++++++++  .+..   .....+.+.....++.+++   +.....+..++.+++++++++. 
T Consensus       206 ~~S~~K~l~-~~~g~g~l~~~~~~i~~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~-  283 (446)
T 2x3l_A          206 VQSFHKTLP-ALTMGSVLYIHKNAPYRENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK-  283 (446)
T ss_dssp             EECHHHHSS-SCTTCEEEEEETTCTTHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-
T ss_pred             EECCccccc-cccccEEEEEcCCcCCHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc-
Confidence            999999643 3345899999776543  3322   1233445554443333333   2211111344445555555554 


Q ss_pred             ccCCCCcc-cCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEE-eCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          350 KDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIR-HYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       350 ~~~~~~~~-~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~-~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                         + +.+ .+..+.++|+.++ +.+..++.+.|.++||.++ ++     .+++|++++   +.+++ ++.++|+++
T Consensus       284 ---g-~~~~~~~~~~~l~i~~~-~~~~~~l~~~L~~~GI~v~~~g-----~~~iRi~~~~~~t~e~i-~l~~aL~~~  349 (446)
T 2x3l_A          284 ---G-FEMLQVDDPLKLLIKYE-GFTGHDIQNWFMNAHIYLELAD-----DYQALAILPLWHHDDTY-LFDSLLRKI  349 (446)
T ss_dssp             ---T-CEEEECSSTTEEEEECT-TSCHHHHHHHHHHTTEEESEEC-----SSCEEEECCCCCTTCCC-CHHHHHHHH
T ss_pred             ---C-CEECcCCCCeEEEEEeC-CcCHHHHHHHHHHCCCEEEecC-----CCEEEEEeecCCCHHHH-HHHHHHHHH
Confidence               3 333 2344568999987 6788999999998899997 43     378999987   45556 666666543

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.93  E-value=6.3e-25  Score=215.74  Aligned_cols=264  Identities=14%  Similarity=0.115  Sum_probs=198.8

Q ss_pred             HHHHHHHhcC---------CCCCCCCCcchHHHHHHHHHHcCCCCCCEEE---eCCHHHHHHHHHHHhcCCCCEEEEcC-
Q 014594          111 PEVREALGQL---------KFPYIYPDPESRRLRAALAKDSGLESDHILV---GCGADELIDLIMRCVLDPGDKIVDCP-  177 (422)
Q Consensus       111 ~~v~~al~~~---------~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~---~~G~~~al~~~~~~l~~~gd~Vl~~~-  177 (422)
                      +.|++++.+.         ..++.|++.+..+|++.+++++|.+  ..++   ++|+++++..++.++++|||+|++++ 
T Consensus        47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~g~~~Le~~lA~l~g~e--~alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~  124 (427)
T 3hvy_A           47 LKVLKAFQEERISESHFTNSSGYGYNDIGRDSLDRVYANIFNTE--SAFVRPHFVNGTHAIGAALFGNLRPNDTMMSICG  124 (427)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHTCS--EEEEETTCCSHHHHHHHHHHHTCCTTCEEEECSS
T ss_pred             HHHHHHHHHHHHHHHhcccCcCCCCCchhHHHHHHHHHHHhCCC--ceEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCC
Confidence            6777777652         1235677778889999999999964  3455   78889999999999999999999998 


Q ss_pred             CCchhHHH-----------HHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-CCCeEEEEeC----CCCccCcCCCHHHHH
Q 014594          178 PTFTMYEF-----------DAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTS----PNNPDGSIINDEDLL  241 (422)
Q Consensus       178 p~y~~~~~-----------~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~----p~NPtG~~~~~e~l~  241 (422)
                      |.|..+..           .++..|++++.++. +++.+|++++++++++ +++|+|++++    |+||||.+.+.+++.
T Consensus       125 ~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~-~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~  203 (427)
T 3hvy_A          125 MPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL-KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEII  203 (427)
T ss_dssp             SCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC-BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHH
T ss_pred             CCchhHHHHhccccchhhhHHHHcCCEEEEecC-CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHH
Confidence            99987653           33457999999998 6778999999999975 6899999999    999999999999999


Q ss_pred             HHHcC---CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcccc-ccceeeecCHHHHHHHHHhcCC--CC--
Q 014594          242 KILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--YN--  313 (422)
Q Consensus       242 ~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~~~~--~~--  313 (422)
                      ++++.   |+++++|++|..+........    .+.+++++|+||.+|.+| .+.||+++++++++++......  .+  
T Consensus       204 ~ia~~~~~g~~livD~a~~~~~~~~~p~~----~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~~g~~  279 (427)
T 3hvy_A          204 KSIREVNENVIVFVDNCYGEFVEEKEPTD----VGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGIGGE  279 (427)
T ss_dssp             HHHHHHCSSSEEEEECTTCTTTSSSCGGG----GTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGG
T ss_pred             HHHHHhCCCCEEEEECCccccccCCCCcc----cCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHhhcCCcccc
Confidence            99986   999999999998763332221    234589999999987544 5679999999999999875322  11  


Q ss_pred             CcH-HH-HHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCce-----EEEEEeCCCCCHHHHHHHHHhC
Q 014594          314 VSV-AA-EVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSN-----FILCEVTSGMDAKKLKDDLAKM  385 (422)
Q Consensus       314 ~~~-~~-~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~-----f~~~~~~~~~~~~~~~~~L~~~  385 (422)
                      ..+ +. ...+...+   .... ++++..++..++.+.|+++|+ .+.|..+.     .+.+.+.+.....+|++.|...
T Consensus       280 ~~~~~~~a~~~~~gl---~~~~~r~~~~~~~a~~la~~L~~~g~-~V~p~~~~~~~~li~~~~l~~~~~~~~f~~~l~~~  355 (427)
T 3hvy_A          280 CGSTFGVMRSLYEGL---FMAPHVTIEAVKGAVFCARIMELAGF-DVLPKYNDKRTDIIQAIKFNDEKKLIDFIKGIQTA  355 (427)
T ss_dssp             CCCCTTCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTTC-EEESCTTSCCSSSEEEEECSSHHHHHHHHHHHHHT
T ss_pred             cCCCHHHHHHHHHhH---hHHHHHHHHHHHHHHHHHHHHHhCCC-eecCCCCCCCceEEEEEeCCCHHHHHHHHHHhccc
Confidence            111 11 22222222   2233 777888999999999999986 44555444     6778875333455677777754

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=99.93  E-value=9.3e-25  Score=218.44  Aligned_cols=315  Identities=13%  Similarity=0.115  Sum_probs=199.8

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhc-CCCC-CCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCC---
Q 014594           96 DIVKIDANENPYGPPPEVREALGQ-LKFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDP---  169 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~-~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~---  169 (422)
                      .++|+..+...    +++.+++.+ +..+ ..| +.++..+||++++++++.  +++++|+|+++++..++++++++   
T Consensus        42 ~ylD~~~~~~~----~~v~~a~~~~l~~~~~~y~~~~~~~~l~~~la~~~~~--~~v~~t~~gt~A~~~al~~~~~~~~~  115 (467)
T 2oqx_A           42 VFIDLLTDSGT----GAVTQSMQAAMMRGDEAYSGSRSYYALAESVKNIFGY--QYTIPTHQGRGAEQIYIPVLIKKREQ  115 (467)
T ss_dssp             CSEECSCCSSC----SCCCHHHHHHTTSCCCCSSSCHHHHHHHHHHHHHHCC--SEEEEEC--CCSHHHHHHHHHHHHHH
T ss_pred             eeEecccCCCc----HHHHHHHHHHhccCcceeccCchhHHHHHHHHHHhCc--CcEEEcCCcHHHHHHHHHHHhccccc
Confidence            45677544333    555666654 3322 356 445788999999999985  68999999999999999998888   


Q ss_pred             --C----CEEEEcCCCchhHHHHHHHcCCEEEEec------CC----CCCCCCHHHHHHHhhc---CCCeEEEEeCCCCc
Q 014594          170 --G----DKIVDCPPTFTMYEFDAAVNGAAVVKVP------RK----SDFSLNVELIADAVER---EKPKCIFLTSPNNP  230 (422)
Q Consensus       170 --g----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~------~~----~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NP  230 (422)
                        |    |+|++..+.|..+.......|+.++...      .+    .++.+|+++|++++++   +++++|++++|+||
T Consensus       116 ~~G~~~~d~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~  195 (467)
T 2oqx_A          116 EKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNS  195 (467)
T ss_dssp             HHCCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCG
T ss_pred             cCCCCccceEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccC
Confidence              8    9888875444555556666788776542      11    2346899999999974   37999999999999


Q ss_pred             c-CcCCCHHHHHHHHc---C-CCeEEEccCCcc----------ccCCCchhhhhh----cCCcEEEEccChhhhccc-cc
Q 014594          231 D-GSIINDEDLLKILE---M-PILVVLDEAYTE----------FSGLESRMEWVK----KHDNLIVLRTFSKRAGLA-GL  290 (422)
Q Consensus       231 t-G~~~~~e~l~~i~~---~-~~~li~Deay~~----------~~~~~~~~~~~~----~~~~~i~~~S~SK~~~~~-G~  290 (422)
                      + |.+++.+.+++|++   . |+++|+|+++..          ..+.+.....+.    .... +++.|+||.+|++ | 
T Consensus       196 ~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d-~~~~s~sK~~g~~~G-  273 (467)
T 2oqx_A          196 AGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYAD-MLAMSAKKDAMVPMG-  273 (467)
T ss_dssp             GGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCS-EEEEESSSTTCCSSC-
T ss_pred             CCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCC-eEEEecccccCCCCc-
Confidence            8 99999877666655   3 999999966543          111121111111    1122 4578999998866 4 


Q ss_pred             cceeeecCHH----HHHHHHHhc---C---CC-CCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccC
Q 014594          291 RVGYGAFPLS----IIEYLWRAK---Q---PY-NVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYP  359 (422)
Q Consensus       291 r~G~i~~~~~----~~~~l~~~~---~---~~-~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p  359 (422)
                        ||++++++    .+..+....   .   .+ ..+.....++...+++....+..++..++++++.+.|++++.... |
T Consensus       274 --g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~  350 (467)
T 2oqx_A          274 --GLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIGVVCQ-Q  350 (467)
T ss_dssp             --EEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTTCCEE-E
T ss_pred             --eEEEecChhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhhHHHHHHHHHHHHHHHHHHHHCCCeee-c
Confidence              78888765    334443321   1   12 223333333323222110011334456778888899987753334 6


Q ss_pred             CCceEEEEEeCC---CCC-----HHHHHHHH-HhCCcEEEeCCC------C-------CCCCeEEEEecCh-hhHHHHHH
Q 014594          360 SYSNFILCEVTS---GMD-----AKKLKDDL-AKMGVMIRHYNN------K-------ELKGYVRVSVGKP-EHTDALME  416 (422)
Q Consensus       360 ~~~~f~~~~~~~---~~~-----~~~~~~~L-~~~gI~v~~~~~------~-------~~~~~iRis~~~~-~~~~~l~~  416 (422)
                      .+++++|++++.   +.+     ...+.+.| .++||.+.+++.      +       ...+++||+++.. .+.+++++
T Consensus       351 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~  430 (467)
T 2oqx_A          351 AGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDF  430 (467)
T ss_dssp             ECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHH
T ss_pred             CCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHHHHH
Confidence            778899998842   333     45568888 799999987442      0       1247999999743 22344555


Q ss_pred             HHhhh
Q 014594          417 CLMHL  421 (422)
Q Consensus       417 al~~l  421 (422)
                      ++++|
T Consensus       431 ~~~~l  435 (467)
T 2oqx_A          431 IIEAF  435 (467)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            55443

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.93  E-value=1.2e-24  Score=215.98  Aligned_cols=310  Identities=17%  Similarity=0.158  Sum_probs=205.4

Q ss_pred             EEcCCCCCCCCCCHHHHHHHhc--C-CCCCCCC---Ccc----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH-h
Q 014594           98 VKIDANENPYGPPPEVREALGQ--L-KFPYIYP---DPE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRC-V  166 (422)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~--~-~~~~~y~---~~~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~-l  166 (422)
                      ..++.+..+...|+.+.+.+.+  . .....|.   ..+    ..++++++++++|.+++++++++|++.+.+.+..+ .
T Consensus        67 ~~~~~g~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~  146 (438)
T 1wyu_A           67 AFLGGGVRSHHVPPVVQALAARGEFLTAYTPYQPEVSQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALR  146 (438)
T ss_dssp             CCCCSSCCCCCCCHHHHHHHTSHHHHHCCSCCSGGGCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHH
T ss_pred             cccCCCccCCcCcHHHHHHHhcchhhhcCCCCcchhhhhHHHHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHh
Confidence            4566666666667776555532  1 1112231   122    45899999999999888899999999444444333 2


Q ss_pred             cCCCCEEEEcCCCchhHHHHH----HHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594          167 LDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (422)
Q Consensus       167 ~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~  242 (422)
                      +++||+|+++.++|+.+...+    +..|++++.++. +++.+|+++    ++ +++++|++++| ||||.+.+.+++.+
T Consensus       147 ~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~~~~~d~~~----i~-~~t~~v~i~~p-n~tG~~~~l~~i~~  219 (438)
T 1wyu_A          147 ETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-EGGRTPLPE----VG-EEVGAVVVQNP-NFLGALEDLGPFAE  219 (438)
T ss_dssp             HHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-BTTBCCCCC----CC-TTEEEEEEESS-CTTSBCCCHHHHHH
T ss_pred             cCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-cCCccCHHH----hC-CCeEEEEEECC-CCCeEEecHHHHHH
Confidence            578999999999998876544    458999999996 445777766    54 68999999999 99999999999999


Q ss_pred             HHcC-CCeEEEccC-CccccCCCchhhhhhcCCcEEEEccChhhhc----cccccceeeecCHHHHHHHH----------
Q 014594          243 ILEM-PILVVLDEA-YTEFSGLESRMEWVKKHDNLIVLRTFSKRAG----LAGLRVGYGAFPLSIIEYLW----------  306 (422)
Q Consensus       243 i~~~-~~~li~Dea-y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~----~~G~r~G~i~~~~~~~~~l~----------  306 (422)
                      +++. |+++|+|.. .+ +...... .   ..+..+++.| +|.||    +.|.|+||+++++++++.+.          
T Consensus       220 la~~~g~~vivd~d~~a-~g~~~~~-~---~~g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~~~  293 (438)
T 1wyu_A          220 AAHGAGALFVAVADPLS-LGVLKPP-G---AYGADIAVGD-GQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDV  293 (438)
T ss_dssp             HHHHTTCEEEEECCTTG-GGTBCCH-H---HHTCSEEEEE-CTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBT
T ss_pred             HHHHcCCEEEEEechhh-ccCcCCC-c---cCCCCEEEEC-CcccCCCccCCCCCeeEEEEcHHHHHhCCCceecccccc
Confidence            9987 999996632 21 1110111 1   2222355555 55543    56778999999988776541          


Q ss_pred             ------------------HhcCCCCC---cHHHHHHHHHHcc--CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCc
Q 014594          307 ------------------RAKQPYNV---SVAAEVAACAALQ--NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYS  362 (422)
Q Consensus       307 ------------------~~~~~~~~---~~~~~~aa~~~L~--~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~  362 (422)
                                        +....++.   +.+...++..++.  ..+.++ +.++++++++++.+.|++++++.+.++..
T Consensus       294 ~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~  373 (438)
T 1wyu_A          294 EGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKP  373 (438)
T ss_dssp             TSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSS
T ss_pred             CCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCCC
Confidence                              11122332   2333222221122  123355 88889999999999999985566544434


Q ss_pred             eEEEEEeCCCCCHHHHHHHHHhCCcEE--EeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          363 NFILCEVTSGMDAKKLKDDLAKMGVMI--RHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       363 ~f~~~~~~~~~~~~~~~~~L~~~gI~v--~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      .|.++.+..+.+..++.+.|.++||.+  +++..+. ++++||++.   +.++++++.++|+++
T Consensus       374 ~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~-~~~lRis~~~~~t~edi~~~~~~l~~~  436 (438)
T 1wyu_A          374 FFNEFALALPKDPEAVRRALAERGFHGATPVPREYG-ENLALFAATELHEEEDLLALREALKEV  436 (438)
T ss_dssp             BCSEEEEECSSCHHHHHHHHHHTTCCCCEECCTTSC-SSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             eEEEEEEeCCCCHHHHHHHHHHCCceeccccccccC-CCeEEEEecccCCHHHHHHHHHHHHHH
Confidence            443333322357899999999999999  5554322 689999998   566777777777654

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.92  E-value=8.6e-23  Score=199.40  Aligned_cols=298  Identities=17%  Similarity=0.135  Sum_probs=210.6

Q ss_pred             CCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-------cCCCCEEEEcCCCc
Q 014594          109 PPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-------LDPGDKIVDCPPTF  180 (422)
Q Consensus       109 ~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-------~~~gd~Vl~~~p~y  180 (422)
                      .++++++++.+ +.....++.++..++|++++++++.+  ++++++++++++..+++++       +++||+|+++.|+|
T Consensus        13 ~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~   90 (390)
T 3b8x_A           13 WDDLEYKAIQSVLDSKMFTMGEYVKQYETQFAKTFGSK--YAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSW   90 (390)
T ss_dssp             CCHHHHHHHHHHHHHTCCSSCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSC
T ss_pred             CCHHHHHHHHHHHHcCCCCCChHHHHHHHHHHHHHCCC--cEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCc
Confidence            35778888766 33223446677899999999999975  6777788889999999998       78999999999999


Q ss_pred             hhHHHHHHHcCCEEEEecCCCC-CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcc
Q 014594          181 TMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE  258 (422)
Q Consensus       181 ~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~  258 (422)
                      +.+...++..|++++.++.+++ +.+|++++++.++ +++++|+++|   ++|...+.+++.++++. |+++|+|++|..
T Consensus        91 ~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~  166 (390)
T 3b8x_A           91 STTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVT-DSTKAILTVN---LLGNPNNFDEINKIIGGRDIILLEDNCESM  166 (390)
T ss_dssp             HHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCC-TTEEEEEEEC---GGGCCCCHHHHHHHHTTSCCEEEEECTTCT
T ss_pred             HHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhC-cCCeEEEEEC---CccChhhHHHHHHHHHHcCCEEEEECcCcc
Confidence            9999999999999999997654 8899999999997 6899999874   67888999999999998 999999999985


Q ss_pred             cc-CCCchhhhhhcCCcEEEEcc--ChhhhccccccceeeecCH-HHHHHHHHhcC------------------------
Q 014594          259 FS-GLESRMEWVKKHDNLIVLRT--FSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQ------------------------  310 (422)
Q Consensus       259 ~~-~~~~~~~~~~~~~~~i~~~S--~SK~~~~~G~r~G~i~~~~-~~~~~l~~~~~------------------------  310 (422)
                      +. ....   ..+... ++...|  .+|.++ +| +.|++++++ ++.+.+.....                        
T Consensus       167 g~~~~~~---~~g~~~-~~~~~s~~~~k~~~-~g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  240 (390)
T 3b8x_A          167 GATFNNK---CAGTFG-LMGTFSSFYSNHIA-TM-EGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEE  240 (390)
T ss_dssp             TCEETTE---ETTSSS-SEEEEECCTTSSSC-SS-SCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTS
T ss_pred             cCEECCc---cccccc-ceEEEEccCCCCCc-cC-CceEEEeCCHHHHHHHHHHHhcCCCcccccccccccccccccccc
Confidence            43 2111   111111 122222  245443 33 459999875 67666544221                        


Q ss_pred             -------CC--CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC--CceE--EEEEeCC--CCC
Q 014594          311 -------PY--NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPS--YSNF--ILCEVTS--GMD  374 (422)
Q Consensus       311 -------~~--~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~--~~~f--~~~~~~~--~~~  374 (422)
                             .+  ..+.+...++...|   ++++ ..++.+++++++.+.|++++.+.+.+.  .+.+  +++.++.  +.+
T Consensus       241 ~~~~~~~g~~~~~~~~~aa~~l~~l---~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  317 (390)
T 3b8x_A          241 SFKFVLPGYNVRPLEMSGAIGIEQL---KKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFIIKKDSGVI  317 (390)
T ss_dssp             SSCBCSCCCBCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEECTTSCCC
T ss_pred             ccceeccccccCcCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEEEEecCcCccc
Confidence                   01  14555555555554   4556 788888999999999998865554332  3333  5566663  467


Q ss_pred             HHHHHHHHHhCCcEEEeCCC-----C-C---------C----------CCeEEEEecChhhHHHHHHHHhhh
Q 014594          375 AKKLKDDLAKMGVMIRHYNN-----K-E---------L----------KGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       375 ~~~~~~~L~~~gI~v~~~~~-----~-~---------~----------~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .+++.+.|.++||.++....     . .         .          .+.+||++....+.++++..++.|
T Consensus       318 ~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l  389 (390)
T 3b8x_A          318 RKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL  389 (390)
T ss_dssp             HHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred             HHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence            89999999999999986321     1 0         0          135999987544445565555554

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.92  E-value=4.4e-24  Score=210.77  Aligned_cols=277  Identities=18%  Similarity=0.169  Sum_probs=193.1

Q ss_pred             CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEe-cCCC
Q 014594          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKV-PRKS  201 (422)
Q Consensus       127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v-~~~~  201 (422)
                      +++...++++++++++|.+ +. ++++++++++..++++++++||+|+++.++|+.+...+    +..|++++.+ +.+ 
T Consensus        56 ~~~~~~~l~~~la~~~g~~-~~-v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-  132 (421)
T 2ctz_A           56 MNPTVDVLEKRLAALEGGK-AA-LATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREE-  132 (421)
T ss_dssp             BCHHHHHHHHHHHHHHTCS-EE-EEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTC-
T ss_pred             CChHHHHHHHHHHHHhCCC-ce-EEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCC-
Confidence            4445689999999999965 34 45555699999999998999999999999998766554    6789999999 742 


Q ss_pred             CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCC-ccccCCCchhhhhhcCCcEEEEc
Q 014594          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY-TEFSGLESRMEWVKKHDNLIVLR  279 (422)
Q Consensus       202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay-~~~~~~~~~~~~~~~~~~~i~~~  279 (422)
                          |+++++++++ +++++|++++|+||||.+.+.+++.++|+. |+++|+|++| ... ......    ..+.++++.
T Consensus       133 ----d~~~l~~~i~-~~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g-~~~~~~----~~~~Di~~~  202 (421)
T 2ctz_A          133 ----RPEEFLALTD-EKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGG-YLLRPL----AWGAALVTH  202 (421)
T ss_dssp             ----CHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGG-TSCCGG----GGTCSEEEE
T ss_pred             ----CHHHHHHhhc-cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccc-ccCCcc----ccCCeEEEE
Confidence                8999999997 689999999999999999999999999998 9999999999 533 222222    123458899


Q ss_pred             cChhhhccccccceeeecC---HHH----HHHHHHh---------------------------c-CCCCCcHHHHHHHHH
Q 014594          280 TFSKRAGLAGLRVGYGAFP---LSI----IEYLWRA---------------------------K-QPYNVSVAAEVAACA  324 (422)
Q Consensus       280 S~SK~~~~~G~r~G~i~~~---~~~----~~~l~~~---------------------------~-~~~~~~~~~~~aa~~  324 (422)
                      |++|.++.+|.|+|++++.   .++    .+.+...                           . .....+++...++..
T Consensus       203 s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~  282 (421)
T 2ctz_A          203 SLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLL  282 (421)
T ss_dssp             ETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHH
T ss_pred             CCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHc
Confidence            9999999899999988873   122    1222110                           0 012445555555555


Q ss_pred             HccCChHHH-HHHHHHHHHHHHHHHHccCCCCcc--cC-----------------CCceEEEEEeCCC-CCHHHHHHHHH
Q 014594          325 ALQNPIYLE-VKEALIKERERLFKLLKDVPFLNP--YP-----------------SYSNFILCEVTSG-MDAKKLKDDLA  383 (422)
Q Consensus       325 ~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~--~p-----------------~~~~f~~~~~~~~-~~~~~~~~~L~  383 (422)
                      .++.   +. +.++..++.+++.+.|++++.+..  +|                 ..+..+.+.+.+. .+...+.+.|.
T Consensus       283 ~l~~---l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~~~~~~~~~~~l~  359 (421)
T 2ctz_A          283 GMET---LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGGYEAAKRFISRLK  359 (421)
T ss_dssp             HHTT---HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTHHHHHHHHHHTCS
T ss_pred             Ccch---HHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCCHHHHHHHHHhCC
Confidence            5533   33 556666889999999998765542  22                 3466788888631 12233334333


Q ss_pred             hCCcEEEeCCC-----------------------CCCCCeEEEEecChhhHHHHHHHHhh
Q 014594          384 KMGVMIRHYNN-----------------------KELKGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       384 ~~gI~v~~~~~-----------------------~~~~~~iRis~~~~~~~~~l~~al~~  420 (422)
                      ..++.++.|+.                       .-.++.||+|++..+ .|++.+.+++
T Consensus       360 ~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~e~-~~~li~~l~~  418 (421)
T 2ctz_A          360 LISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGLEH-VEDLKAELKE  418 (421)
T ss_dssp             SSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSC-HHHHHHHHHH
T ss_pred             cceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCCCC-HHHHHHHHHH
Confidence            33444443311                       011489999999754 5777776654

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=99.92  E-value=9.5e-24  Score=213.24  Aligned_cols=286  Identities=12%  Similarity=0.056  Sum_probs=204.8

Q ss_pred             HHHHHHHHHcCCC--CCCEEEeCCHHHHHHHHHHHhcC--------CC-----C-EEEEcCCCchhHHHHHHHcCC---E
Q 014594          133 RLRAALAKDSGLE--SDHILVGCGADELIDLIMRCVLD--------PG-----D-KIVDCPPTFTMYEFDAAVNGA---A  193 (422)
Q Consensus       133 ~lr~~la~~~~~~--~~~i~~~~G~~~al~~~~~~l~~--------~g-----d-~Vl~~~p~y~~~~~~~~~~g~---~  193 (422)
                      ++++++++++|.+  ++++++|+|+++++..++.++..        +|     + .|+++.+.|..+...++..|.   +
T Consensus       136 ~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~  215 (504)
T 2okj_A          136 ITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDN  215 (504)
T ss_dssp             HHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGG
T ss_pred             HHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHHcCCCccc
Confidence            4556668888987  77999999999999999987743        56     6 789999999999988888877   8


Q ss_pred             EEEecCCCCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCC-chh
Q 014594          194 VVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE-SRM  266 (422)
Q Consensus       194 ~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~-~~~  266 (422)
                      ++.+|.++++.+|+++|++++++.     ++++|++++|+||||.+.+.++|.++|+. |+++++|++|..+.... ...
T Consensus       216 v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~  295 (504)
T 2okj_A          216 VILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHR  295 (504)
T ss_dssp             EEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTG
T ss_pred             EEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhH
Confidence            999998778899999999999642     58999999999999999999999999998 99999999998765321 111


Q ss_pred             hhhh-cCCcEEEEccChhhhccccccceeeecCH-HHHHHHHHhcCCCC-----------------------CcHHHHHH
Q 014594          267 EWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPYN-----------------------VSVAAEVA  321 (422)
Q Consensus       267 ~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~~l~~~~~~~~-----------------------~~~~~~~a  321 (422)
                      ..+. .....+++.+++|.++.| .++|++++++ ++++.......+|-                       .+.+.+.+
T Consensus       296 ~~~~g~~~~D~i~~~~hK~~~~p-~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a  374 (504)
T 2okj_A          296 HKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWL  374 (504)
T ss_dssp             GGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHH
T ss_pred             hhcCCcccCCEEEECchhhcCCC-cceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHH
Confidence            1111 112336777899987744 6899999875 56664332221110                       13566666


Q ss_pred             HHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCccc----CCCceEEEEEeCCCC---------------CHHHHHHH
Q 014594          322 ACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPY----PSYSNFILCEVTSGM---------------DAKKLKDD  381 (422)
Q Consensus       322 a~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~----p~~~~f~~~~~~~~~---------------~~~~~~~~  381 (422)
                      +..++.. ++++ +.++..++++++.+.|++++.+.+.    |..++++|...|...               ...++.+.
T Consensus       375 ~l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  453 (504)
T 2okj_A          375 MWKAKGT-VGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKAL  453 (504)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHH
T ss_pred             HHHHhhH-HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHH
Confidence            6666754 3444 8888999999999999998655543    445555554444210               13568888


Q ss_pred             HHhCCcEEEe-CCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014594          382 LAKMGVMIRH-YNNKELKGYVRVSVG----KPEHTDALMECLMH  420 (422)
Q Consensus       382 L~~~gI~v~~-~~~~~~~~~iRis~~----~~~~~~~l~~al~~  420 (422)
                      |.++|+.+.. ....+..+++|++++    +.++++++.++|++
T Consensus       454 L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~  497 (504)
T 2okj_A          454 MMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIER  497 (504)
T ss_dssp             HHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHH
T ss_pred             HHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence            8888864433 221222369999997    45566666666654

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=99.92  E-value=8.2e-24  Score=205.96  Aligned_cols=280  Identities=11%  Similarity=0.069  Sum_probs=197.6

Q ss_pred             hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHH--HHHHHcC--CEEEEecCCC-----
Q 014594          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE--FDAAVNG--AAVVKVPRKS-----  201 (422)
Q Consensus       131 ~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~--~~~~~~g--~~~~~v~~~~-----  201 (422)
                      ..++++.++++++.+ +.+++++|++++++.++. ++++||+|++..+.|+.+.  ..++..|  .+++.++.+.     
T Consensus        37 ~~~~~~~l~~~~~~~-~~v~~~~sgt~a~~~~~~-~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~  114 (379)
T 3ke3_A           37 MNDLLSNLKTVYNAE-AAVIIPGSGTYGMEAVAR-QLTIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERTEDTE  114 (379)
T ss_dssp             HHHHHHHHHHHHTCS-EEEEEESCHHHHHHHHHH-HHCTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEESSCCS
T ss_pred             HHHHHHHHHHHhCCC-CEEEEcCChhHHHHHHHH-hCCCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEecccccccc
Confidence            457888999999986 789999999999999986 4579999999999997653  3445555  4777777432     


Q ss_pred             ---C-CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC---HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCC
Q 014594          202 ---D-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN---DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHD  273 (422)
Q Consensus       202 ---~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~---~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~  273 (422)
                         . ..+|++++++.+.++++++|++++++||||.+++   .+++.++++. |+++|+|+++. .. .+..   +...+
T Consensus       115 ~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~-~~~~---~~~~~  189 (379)
T 3ke3_A          115 APKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GC-VWLD---MKELG  189 (379)
T ss_dssp             SCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TT-CCCC---HHHHT
T ss_pred             ccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CC-cccc---ccccC
Confidence               1 2589999999996458999999999999999999   6666677765 99999999987 32 1111   11223


Q ss_pred             cEEEEccChhhhccccccceeeecCHHHHHHHHHhc----------------------CC--CCCcHHHHHHHHHHccCC
Q 014594          274 NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK----------------------QP--YNVSVAAEVAACAALQNP  329 (422)
Q Consensus       274 ~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~----------------------~~--~~~~~~~~~aa~~~L~~~  329 (422)
                      .++++.|++|.++ .+.++|++++++++++.+....                      ..  ++.+...+.++.++|+.-
T Consensus       190 ~d~~~~s~~K~l~-~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~  268 (379)
T 3ke3_A          190 IDVLISAPQKGWS-STPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEA  268 (379)
T ss_dssp             CSEEEECTTTTTC-SCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHH
T ss_pred             CCEEEecchhhcC-CCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHH
Confidence            4588889999876 3345899999999988776411                      11  266777777776766531


Q ss_pred             --hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCC--ceEEE-EEeCCCCCHHHHHHHHHhCCcEEEeCCCC-----CCC
Q 014594          330 --IYLE-VKEALIKERERLFKLLKDVPFLNPYPSY--SNFIL-CEVTSGMDAKKLKDDLAKMGVMIRHYNNK-----ELK  398 (422)
Q Consensus       330 --~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~--~~f~~-~~~~~~~~~~~~~~~L~~~gI~v~~~~~~-----~~~  398 (422)
                        +.++ ++++++++++++.+.|+++++....+..  +..+. +..+ + ....+.+.|.++||.+.++..+     ..+
T Consensus       269 ~~~g~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~-~-~~~~~~~~L~~~Gi~v~~g~~~~~~~~~~~  346 (379)
T 3ke3_A          269 KEIGFDILRDAQWELGNRVRKVLTDKGIESVAAEGFEAPGVVVSYTE-R-DDMHKGSAFAEAGLQIAAGVPLKVGEPDNF  346 (379)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSBCTTCBCSSEEEEECS-C-HHHHSSHHHHHTTCCCEECCCCSSCCCTTC
T ss_pred             HHhcHHHHHHHHHHHHHHHHHHHHHcCCEecCCccccCceEEEEccC-C-cchHHHHHHHHCCeEEeCCccccccccCcC
Confidence              2234 8888899999999999988643333321  33333 3332 2 1222367788999999987642     236


Q ss_pred             CeEEEEecC---hhhHHHHHHHHhh
Q 014594          399 GYVRVSVGK---PEHTDALMECLMH  420 (422)
Q Consensus       399 ~~iRis~~~---~~~~~~l~~al~~  420 (422)
                      +.+||++..   .++++++.++|++
T Consensus       347 ~~lRis~~~~~t~~di~~~~~~l~~  371 (379)
T 3ke3_A          347 KTFRLGLFGLDKLTDIDGTVERFEK  371 (379)
T ss_dssp             CEEEEECCSHHHHTCHHHHHHHHHH
T ss_pred             CEEEEeCCcCCCHHHHHHHHHHHHH
Confidence            899999863   4555555555543

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=99.92  E-value=3e-23  Score=206.98  Aligned_cols=317  Identities=14%  Similarity=0.135  Sum_probs=206.2

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCc----c---hHHHH----HHHHHHcCCCCCC---EEEeCCHHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDP----E---SRRLR----AALAKDSGLESDH---ILVGCGADEL  158 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~y~~~----~---~~~lr----~~la~~~~~~~~~---i~~~~G~~~a  158 (422)
                      +.|.|-.++|.  ++|.|++++.. +.  +..+||..    |   ..+++    +.+++++|.+.+.   .+++++++++
T Consensus        55 ~~i~lias~n~--~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~A  132 (490)
T 2a7v_A           55 RGLELIASENF--CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPA  132 (490)
T ss_dssp             HSEECCTTCCC--CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHH
T ss_pred             cCceEECCCCC--CCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHH
Confidence            34788777776  47999999987 32  33345421    1   23555    8899999987653   3556688999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCCEE--EEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCC
Q 014594          159 IDLIMRCVLDPGDKIVDCPPTFTMYEF--------DAAVNGAAV--VKVPRK-SDFSLNVELIADAVEREKPKCIFLTSP  227 (422)
Q Consensus       159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~--~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p  227 (422)
                      +..++.++++|||+|++..+.|..+..        .+...|..+  +.++.+ +++.+|++++++.+.+.++|+|+++++
T Consensus       133 n~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~~~klIi~~~s  212 (490)
T 2a7v_A          133 NLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTS  212 (490)
T ss_dssp             HHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECCS
T ss_pred             HHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhhcCCcEEEEcCC
Confidence            999999999999999999998864321        223455543  344433 457899999999997567899998888


Q ss_pred             CCccCcCCCHHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHH-----
Q 014594          228 NNPDGSIINDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-----  300 (422)
Q Consensus       228 ~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~-----  300 (422)
                      +||  ...+.+++.+||+. |+++++|++|.. +...+.....+.  ...+++.|+||.+  .|.|.|+++++++     
T Consensus       213 ~~~--~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~--~aDiv~~S~hK~l--~Gp~GG~i~~~~~~~~~~  286 (490)
T 2a7v_A          213 AYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK--HADIVTTTTHKTL--RGARSGLIFYRKGVKAVD  286 (490)
T ss_dssp             SCC--SCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG--TCSEEEEESSGGG--CSCSCEEEEEECSEEEEE
T ss_pred             CCC--CcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC--CCCEEEECCcccC--ccccchheeeccchhccc
Confidence            887  46789999999987 999999999752 221111111111  2348889999986  4678899998763     


Q ss_pred             ----------HHHHHHHhcCCC---CCcHHHHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHHccCCCCccc-CCCce
Q 014594          301 ----------IIEYLWRAKQPY---NVSVAAEVAACAALQN---PIYLEVKEALIKERERLFKLLKDVPFLNPY-PSYSN  363 (422)
Q Consensus       301 ----------~~~~l~~~~~~~---~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~  363 (422)
                                +.+++.+...++   +++.....++..++..   +++.+..+++.++++++.+.|++.|+..+. +.+.+
T Consensus       287 ~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~G~~v~~~~t~t~  366 (490)
T 2a7v_A          287 PKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNH  366 (490)
T ss_dssp             TTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSS
T ss_pred             ccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcCcEEecCCCCCe
Confidence                      556666554432   3344444444444432   344337788899999999999998643332 24567


Q ss_pred             EEEEEeCC-CCCHHHHHHHHHhCCcEEEeC----CC-CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014594          364 FILCEVTS-GMDAKKLKDDLAKMGVMIRHY----NN-KELKGYVRVSVG-------KPEHTDALMECLMH  420 (422)
Q Consensus       364 f~~~~~~~-~~~~~~~~~~L~~~gI~v~~~----~~-~~~~~~iRis~~-------~~~~~~~l~~al~~  420 (422)
                      ++|+++.+ +.+..++.+.|.++||.+..+    +. +..+..|||+..       ++++++++.+++.+
T Consensus       367 lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~  436 (490)
T 2a7v_A          367 LVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDE  436 (490)
T ss_dssp             EEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             EEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHH
Confidence            88999863 568888999999999999853    22 334678999762       35667777777654

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=99.85  E-value=3.3e-26  Score=227.03  Aligned_cols=293  Identities=14%  Similarity=0.069  Sum_probs=206.8

Q ss_pred             CCCCCCeEEcCCCCCC--CC-CCHHHHHHHhc-CCC--CCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594           91 GRKPEDIVKIDANENP--YG-PPPEVREALGQ-LKF--PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~~--~~-~~~~v~~al~~-~~~--~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~  164 (422)
                      +.+++++||+..|..+  ++ .+|+|.+++.+ +..  ...|+.+...+|.++|+++++ ..+.+++++|+++|++.+++
T Consensus        96 D~dG~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~~~~~~~~~~~Lae~L~~~~p-~~~~v~~~nSGseA~~~Aik  174 (465)
T 2yky_A           96 DVDGHAYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLSTQTENEALFAEAVCDRFP-SIDLVRFTNSGTEANLMALA  174 (465)
Confidence            4567889999988764  43 47889888876 332  245677777899999999996 46789999999999999998


Q ss_pred             Hhc--CCCCEEEEcCCCchhHHHHHH----HcCC--EEEEecCCCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCccCcC
Q 014594          165 CVL--DPGDKIVDCPPTFTMYEFDAA----VNGA--AVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSI  234 (422)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~~~----~~g~--~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~  234 (422)
                      ...  ..+++|++..++|+.+...+.    ..|+  .++.++.     .|++.|++.+++  +++++|+++..++++|.+
T Consensus       175 ~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-----~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~  249 (465)
T 2yky_A          175 TATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-----NDVEGTADLLKRHGHDCAAILVEPMLGAGGCV  249 (465)
Confidence            642  345899999999987655433    1233  2233331     378899998864  578888887656679987


Q ss_pred             CC----HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHH--
Q 014594          235 IN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR--  307 (422)
Q Consensus       235 ~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~--  307 (422)
                      .+    .+++.++++. |+++|+||+|. |..+.  ....+..+....+.||||.+| +|+|+||+++++++++.+..  
T Consensus       250 ~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~--~~a~~~~gv~pDi~t~sK~lg-~G~piG~v~~~~~i~~~l~~~~  325 (465)
T 2yky_A          250 PAERAFLDLLRAEASRCGALLIFDEVMT-SRLSG--GGAQEMLGISADLTTLGKYIG-GGMSFGAFGGRRDLMERFDPAR  325 (465)
Confidence            76    5666666666 99999999999 74321  111222222334568999998 59999999999999998876  


Q ss_pred             -----hcCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC----CCCcccCCCceEEEEEeCC-C-----
Q 014594          308 -----AKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV----PFLNPYPSYSNFILCEVTS-G-----  372 (422)
Q Consensus       308 -----~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~f~~~~~~~-~-----  372 (422)
                           ...+++.|+++++++.++|+.-+-.+..++++++.+++.+.|+++    +.....+..|.++++.+++ .     
T Consensus       326 ~g~~~~~~T~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~  405 (465)
T 2yky_A          326 DGAFAHAGTFNNNILTMSAGHAALTQIYTRQAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAG  405 (465)
Confidence                 123477889999999888864211125566666666776666654    3222346778899988763 1     


Q ss_pred             -------CCHHHHHHHHHhCCcEEEeCC
Q 014594          373 -------MDAKKLKDDLAKMGVMIRHYN  393 (422)
Q Consensus       373 -------~~~~~~~~~L~~~gI~v~~~~  393 (422)
                             .....+.+.|+++||++.++.
T Consensus       406 ~~~~~d~~~~~~~~~~ll~~GV~v~p~~  433 (465)
T 2yky_A          406 DVRAADQQLKELFFFHMLRKGIYLAPRG  433 (465)
Confidence                   114578888999999999875

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=99.90  E-value=4.8e-23  Score=207.72  Aligned_cols=309  Identities=13%  Similarity=0.098  Sum_probs=209.6

Q ss_pred             CCHHHHHHHhc--CC-CCCCCC-CcchHH----HHHHHHHHcCCCC-CCEEEeCCHHHHHHHHHHHh----c--------
Q 014594          109 PPPEVREALGQ--LK-FPYIYP-DPESRR----LRAALAKDSGLES-DHILVGCGADELIDLIMRCV----L--------  167 (422)
Q Consensus       109 ~~~~v~~al~~--~~-~~~~y~-~~~~~~----lr~~la~~~~~~~-~~i~~~~G~~~al~~~~~~l----~--------  167 (422)
                      .++.+.+++..  .. ....|. .+...+    +++++++++|.++ +++++|+|+++++..++.+.    +        
T Consensus       112 ~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~  191 (497)
T 2qma_A          112 LMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSI  191 (497)
T ss_dssp             BHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_pred             cHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccch
Confidence            35666666543  11 113342 233333    4666888999865 79999999999999988863    3        


Q ss_pred             -CC------CC-EEEEcCCCchhHHHHHHHcCC---EEEEecCCCCCCCCHHHHHHHhhcC---CCe--EEEEeCCCCcc
Q 014594          168 -DP------GD-KIVDCPPTFTMYEFDAAVNGA---AVVKVPRKSDFSLNVELIADAVERE---KPK--CIFLTSPNNPD  231 (422)
Q Consensus       168 -~~------gd-~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~~---~~~--~i~l~~p~NPt  231 (422)
                       .+      |+ .|+++.+.|..+...+...|.   +++.+|.++++.+|+++|++++++.   +++  +|++++++|||
T Consensus       192 ~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~t  271 (497)
T 2qma_A          192 QKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDH  271 (497)
T ss_dssp             HHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTT
T ss_pred             hhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCC
Confidence             12      46 799999999988888888876   7999998778899999999998642   344  88888999999


Q ss_pred             CcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhc-CCcEEEEccChhhhccccccceeeecCH-HHHHHHHHh
Q 014594          232 GSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRA  308 (422)
Q Consensus       232 G~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~~l~~~  308 (422)
                      |.+.+.++|.++|+. |+++++|++|..+.........+.. ....+++.|++|.++.+ .++|++++++ ..++.+...
T Consensus       272 G~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p-~~~G~l~~~~~~~~~~~~~~  350 (497)
T 2qma_A          272 GAIDDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQT-ISCGALLVNDKSNFKFLLHH  350 (497)
T ss_dssp             CCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCC-SSCEEEEESCGGGGGGGCC-
T ss_pred             CCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCC-cceEEEEEeCHHHHHHhcCC
Confidence            999999999999998 9999999999876532221111111 12236777899987754 6999999854 333322110


Q ss_pred             cCCC--C-----C-------------cHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEE
Q 014594          309 KQPY--N-----V-------------SVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFIL  366 (422)
Q Consensus       309 ~~~~--~-----~-------------~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~  366 (422)
                       ..|  .     .             ..+.+.++...+. .++++ +.++..++++++.+.|++++.+.+ .+..+++++
T Consensus       351 -~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~  428 (497)
T 2qma_A          351 -ADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVG-PKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLSTVL  428 (497)
T ss_dssp             --------------------CCSCCCTHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSSEEE
T ss_pred             -chhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCceEEE
Confidence             001  0     0             1233444445553 34455 888889999999999999865554 456677888


Q ss_pred             EEeCCC-CC----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014594          367 CEVTSG-MD----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG----KPEHTDALMECLMH  420 (422)
Q Consensus       367 ~~~~~~-~~----~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~----~~~~~~~l~~al~~  420 (422)
                      +++.+. .+    ..++.+.|.++|+.+.++......+++||+++    +.++++++.++|++
T Consensus       429 f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~  491 (497)
T 2qma_A          429 FRATHETADLDELNKALRLEALTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINM  491 (497)
T ss_dssp             EEECCSSSCHHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             EEEcCCccCHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence            887532 12    24566778888988865433334579999983    45555666555544

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=99.90  E-value=5.6e-23  Score=206.65  Aligned_cols=305  Identities=11%  Similarity=0.015  Sum_probs=203.9

Q ss_pred             HHHHHHHhcC-CC-CCCC-CCcchHHHHH----HHHHHcCCCC---------CCEEEeCCHHHHHHHHHHHhcCC-----
Q 014594          111 PEVREALGQL-KF-PYIY-PDPESRRLRA----ALAKDSGLES---------DHILVGCGADELIDLIMRCVLDP-----  169 (422)
Q Consensus       111 ~~v~~al~~~-~~-~~~y-~~~~~~~lr~----~la~~~~~~~---------~~i~~~~G~~~al~~~~~~l~~~-----  169 (422)
                      ..+.+++... .. ...| ..++..++++    .+++++|.+.         ..+++|+|+++++..++.+..++     
T Consensus        88 ~~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~  167 (486)
T 1js3_A           88 AMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRL  167 (486)
T ss_dssp             HHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhh
Confidence            3455666552 22 2334 3344455554    4566678764         36899999999998888765321     


Q ss_pred             ----CC--------E--EEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCC------eEEEEeCCCC
Q 014594          170 ----GD--------K--IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKP------KCIFLTSPNN  229 (422)
Q Consensus       170 ----gd--------~--Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~------~~i~l~~p~N  229 (422)
                          ||        +  |+++.++|..+...++..|++++.+|.++++.+|+++|++++++ ++      .+|++++|+|
T Consensus       168 ~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~-~~~~g~~p~~vv~~~~~n  246 (486)
T 1js3_A          168 QAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALER-DKAAGLIPFFVVATLGTT  246 (486)
T ss_dssp             HHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHH-HHHTTCEEEEEEEEBSCT
T ss_pred             hccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecCCCCCCCHHHHHHHHHH-HHhCCCCceEEEEeCCCC
Confidence                42        3  78899999999999999999999999877889999999999963 33      3888899999


Q ss_pred             ccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCC-ch---hhhhhcCCcEEEEccChhhhccccccceeeecCHH-H-H
Q 014594          230 PDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE-SR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-I-I  302 (422)
Q Consensus       230 PtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~-~~---~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~-~-~  302 (422)
                      |||.+-+.++|.++|+. |+++++|++|..+.... ..   ...+.  +...++.+++|.++.+ +++|+++++.+ . .
T Consensus       247 ~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~--~adsi~~~~hK~~~~p-~~~G~l~~~~~~~l~  323 (486)
T 1js3_A          247 SCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVE--FADSFNFNPHKWLLVN-FDCSAMWVKRRTDLT  323 (486)
T ss_dssp             TTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGG--GCSEEEECHHHHSSCC-SSCEEEEESCHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCcc--ccCeeEEchhhhcCCC-cceEEEEEeCHHHHH
Confidence            99999999999999987 99999999998754211 11   11111  1224557889987754 88999998643 3 3


Q ss_pred             HHHH-------HhcC-------------CC--CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcc-c
Q 014594          303 EYLW-------RAKQ-------------PY--NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNP-Y  358 (422)
Q Consensus       303 ~~l~-------~~~~-------------~~--~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~  358 (422)
                      +.+.       ....             ..  ....+.+.++...+.. ++++ +.++..++++++.+.|++++.+.+ .
T Consensus       324 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  402 (486)
T 1js3_A          324 GAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGV-KGLQAYIRKHVQLSHEFEAFVLQDPRFEVCA  402 (486)
T ss_dssp             GGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCTTEEECS
T ss_pred             HHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeC
Confidence            3221       1000             00  1234555555555533 3455 888889999999999998865654 3


Q ss_pred             CCCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC----hhhHHHHHHHHhh
Q 014594          359 PSYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK----PEHTDALMECLMH  420 (422)
Q Consensus       359 p~~~~f~~~~~~~~-~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~----~~~~~~l~~al~~  420 (422)
                      +...+++.+++++. ....++.+.|.++|+.+.........+++|++++.    .++++++.++|++
T Consensus       403 ~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~  469 (486)
T 1js3_A          403 EVTLGLVCFRLKGSDGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRG  469 (486)
T ss_dssp             CCCSSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             CCceeEEEEEecChHHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence            34566666777521 12477888888778654332222346799999853    3345555555443

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=99.90  E-value=9.8e-24  Score=211.20  Aligned_cols=319  Identities=12%  Similarity=0.056  Sum_probs=204.0

Q ss_pred             CCCCCCeEEcCCCCC--CCC-CCHHHHHHHhcCC------CCCCCCCcchHHHHHHHHH----HcCCCCCCEEEeCCHHH
Q 014594           91 GRKPEDIVKIDANEN--PYG-PPPEVREALGQLK------FPYIYPDPESRRLRAALAK----DSGLESDHILVGCGADE  157 (422)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~~-~~~~v~~al~~~~------~~~~y~~~~~~~lr~~la~----~~~~~~~~i~~~~G~~~  157 (422)
                      ..+++++||+..|..  .++ .+|++.+++.+..      +...|+.....++++++++    +++...++|++++|+++
T Consensus        59 d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~l~~~~~~~~~~v~f~~sGse  138 (472)
T 1ohv_A           59 DVDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVAPKGMSQLITMACGSC  138 (472)
T ss_dssp             BTTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGGGCCTTCCEEEEESSHHH
T ss_pred             eCCCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHhCCCCcCEEEEeCCchh
Confidence            345778999987753  344 5899999997631      2223443334677777766    44446789999999999


Q ss_pred             HHHHHHHHhc--------C-----------------CC---CEEEEcCCCchhHHHHHH-HcCCE-------------EE
Q 014594          158 LIDLIMRCVL--------D-----------------PG---DKIVDCPPTFTMYEFDAA-VNGAA-------------VV  195 (422)
Q Consensus       158 al~~~~~~l~--------~-----------------~g---d~Vl~~~p~y~~~~~~~~-~~g~~-------------~~  195 (422)
                      |++.+++...        .                 ||   ++|++..+.|+.+...+. ..|..             .+
T Consensus       139 A~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~  218 (472)
T 1ohv_A          139 SNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIA  218 (472)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEE
T ss_pred             HHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCccc
Confidence            9999998763        1                 45   899999999986655443 23321             11


Q ss_pred             EecCCC-----C--C-----CCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEc
Q 014594          196 KVPRKS-----D--F-----SLNVELIADAVERE-----KPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLD  253 (422)
Q Consensus       196 ~v~~~~-----~--~-----~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~D  253 (422)
                      .+|...     .  +     ..|++.|++.+++.     ++++|++++.+|++|.+.+    .+++.++|+. |+++|+|
T Consensus       219 ~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~D  298 (472)
T 1ohv_A          219 PFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVD  298 (472)
T ss_dssp             CCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEe
Confidence            222100     0  0     12688999988641     7889988887888998766    6666666665 9999999


Q ss_pred             cCCccccCCCch--hhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHccCC
Q 014594          254 EAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNP  329 (422)
Q Consensus       254 eay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~aa~~~L~~~  329 (422)
                      |+|..|...+..  ....+.. ..+.+.||||.+ ++|   ||++ ++++. .+...  ...++.+++++.++.++|+.-
T Consensus       299 Ev~~g~g~~g~~~~~~~~gv~-~~~Di~t~sK~~-l~G---G~~~-~~~~~-~~~~~~~~~T~~~~~~~~aaa~aal~~~  371 (472)
T 1ohv_A          299 EVQTGGGSTGKFWAHEHWGLD-DPADVMTFSKKM-MTG---GFFH-KEEFR-PNAPYRIFNTWLGDPSKNLLLAEVINII  371 (472)
T ss_dssp             CTTTTTTTTSSSSGGGGGCCS-SCCSEEEECGGG-SSE---EEEE-CGGGS-CSSSSSSCCSSSSCHHHHHHHHHHHHHH
T ss_pred             CcccCCCCCCCchhccccCCC-CCCCEEEEcccc-ccC---CccC-chhhc-ccccccccCccCccHHHHHHHHHHHHHH
Confidence            999977654321  1111111 002234889985 445   7776 66542 11111  123567899999888888531


Q ss_pred             hHHHHHHHHHHHHHHHHHHHccC----CC-CcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEE
Q 014594          330 IYLEVKEALIKERERLFKLLKDV----PF-LNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVS  404 (422)
Q Consensus       330 ~~~~~~~~~~~~~~~l~~~L~~~----~~-~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis  404 (422)
                      .-.+..++++++++++.+.|+++    +. +...++.+.|+++++++..+...+.+.|+++||.+.++.    .++|||+
T Consensus       372 ~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g----~~~iRi~  447 (472)
T 1ohv_A          372 KREDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTFCSFDTPDESIRNKLISIARNKGVMLGGCG----DKSIRFR  447 (472)
T ss_dssp             HHTTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETTEEEEECSSHHHHHHHHHHHHHTTEECEEET----TTEEEEC
T ss_pred             HhCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCCceEEEEEeCChhHHHHHHHHHHHCCeEEecCC----CCEEEEE
Confidence            11015677777888887777654    32 222334577888888632346788999999999999863    5799997


Q ss_pred             ecChhhHHHHHHHHhh
Q 014594          405 VGKPEHTDALMECLMH  420 (422)
Q Consensus       405 ~~~~~~~~~l~~al~~  420 (422)
                      ++...+.+++++++++
T Consensus       448 ~~~~~t~e~i~~~~~~  463 (472)
T 1ohv_A          448 PTLVFRDHHAHLFLNI  463 (472)
T ss_dssp             CCTTCCHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHH
Confidence            7633223444444443

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=99.90  E-value=1.4e-22  Score=205.07  Aligned_cols=287  Identities=16%  Similarity=0.079  Sum_probs=201.6

Q ss_pred             HHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhc-------C-CCC------EEEEcCCCchhHHHHHHHcCC---EE
Q 014594          132 RRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL-------D-PGD------KIVDCPPTFTMYEFDAAVNGA---AV  194 (422)
Q Consensus       132 ~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~-------~-~gd------~Vl~~~p~y~~~~~~~~~~g~---~~  194 (422)
                      .++++++++++|.+++++++++|+++++..++.++.       + +||      .|+++.+.|..+...++..|.   ++
T Consensus       151 ~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v  230 (515)
T 2jis_A          151 EEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSV  230 (515)
T ss_dssp             HHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGE
T ss_pred             HHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcCCCCCcE
Confidence            457778999999988899999999999988888653       2 575      899999999999888888888   89


Q ss_pred             EEecCCCCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCc-hhh
Q 014594          195 VKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES-RME  267 (422)
Q Consensus       195 ~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~-~~~  267 (422)
                      +.+|.++++.+|+++|++++.+.     ++++|++++|+||||.+.+.++|.++|+. |+++++|++|..+..... ...
T Consensus       231 ~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~  310 (515)
T 2jis_A          231 RVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRH  310 (515)
T ss_dssp             EEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGG
T ss_pred             EEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChhhHh
Confidence            99998778899999999999742     48999999999999999999999999998 999999999997653211 111


Q ss_pred             hhhc-CCcEEEEccChhhhccccccceeeecCHH--HHHHHHHhcCC-----------------C------CCcHHHHHH
Q 014594          268 WVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLS--IIEYLWRAKQP-----------------Y------NVSVAAEVA  321 (422)
Q Consensus       268 ~~~~-~~~~i~~~S~SK~~~~~G~r~G~i~~~~~--~~~~l~~~~~~-----------------~------~~~~~~~~a  321 (422)
                      .+.. .+.++++.|++|.++. +.++|+++++++  ++++......+                 +      ....+.+.+
T Consensus       311 ~~~g~~~aD~v~~s~hK~l~~-p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~  389 (515)
T 2jis_A          311 LLDGIQRADSVAWNPHKLLAA-GLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWL  389 (515)
T ss_dssp             GGTTGGGCSEEEECTTSTTCC-CSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHH
T ss_pred             hcCCCccCCEEEECcccccCC-CCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHH
Confidence            1111 1334788899998763 457999998765  66643211000                 0      012444555


Q ss_pred             HHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCccc--CCCceEEEEEeCCC-------CC--------HHHHHHHHH
Q 014594          322 ACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPY--PSYSNFILCEVTSG-------MD--------AKKLKDDLA  383 (422)
Q Consensus       322 a~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~--p~~~~f~~~~~~~~-------~~--------~~~~~~~L~  383 (422)
                      +..++.. +.++ +.++..++++++.+.|++++.+.+.  |..+.+.|...|.+       .+        ...+.+.|.
T Consensus       390 ~l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~  468 (515)
T 2jis_A          390 MWKAQGD-QGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMV  468 (515)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHH
T ss_pred             HHHHHhH-HHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHH
Confidence            5555643 3344 8888999999999999998655543  33344444333421       11        012566777


Q ss_pred             hCCcEEEeCCC-CCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014594          384 KMGVMIRHYNN-KELKGYVRVSVG----KPEHTDALMECLMH  420 (422)
Q Consensus       384 ~~gI~v~~~~~-~~~~~~iRis~~----~~~~~~~l~~al~~  420 (422)
                      +.|+.+..... .+..+++||+++    +.++++++.++|++
T Consensus       469 ~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~  510 (515)
T 2jis_A          469 KEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELER  510 (515)
T ss_dssp             HHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             hcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence            88876543221 223479999994    45566666666654

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.90  E-value=3.6e-23  Score=204.12  Aligned_cols=265  Identities=15%  Similarity=0.117  Sum_probs=192.1

Q ss_pred             HHHHHHHhcC---------CCCCCCCCcchHHHHHHHHHHcCCCCCC--EEEeCCHHHHHHHHHHHhcCCCCEEEEcC-C
Q 014594          111 PEVREALGQL---------KFPYIYPDPESRRLRAALAKDSGLESDH--ILVGCGADELIDLIMRCVLDPGDKIVDCP-P  178 (422)
Q Consensus       111 ~~v~~al~~~---------~~~~~y~~~~~~~lr~~la~~~~~~~~~--i~~~~G~~~al~~~~~~l~~~gd~Vl~~~-p  178 (422)
                      +++++++.+.         ..++.|++.+..++++.+++++|.+...  ++++ |+++++..++.+++++||+|+++. |
T Consensus        38 ~~vl~A~~~~~~~~~~~~~~~g~~y~~~~~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~~~~~  116 (431)
T 3ht4_A           38 FRVLESFGKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGILRPGDELLYITGK  116 (431)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCCSCHHHHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEECSSS
T ss_pred             HHHHHHHHHhchhhhhcCCCCCCCCChhhHHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhCCCCCEEEEeCCC
Confidence            5666776542         1125567777889999999999975432  2344 668999999999999999999998 9


Q ss_pred             CchhHHHHH----------HHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEe-CCCCccCcCCCHHHHHHHHc--
Q 014594          179 TFTMYEFDA----------AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILE--  245 (422)
Q Consensus       179 ~y~~~~~~~----------~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~e~l~~i~~--  245 (422)
                      .|..+...+          +..|++++.++.++++.+|+++++++++ +++++|+++ +|+||+|...+.+++++|++  
T Consensus       117 ~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~-~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la  195 (431)
T 3ht4_A          117 PYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIH-SNTKMIGIQRSKGYATRPSFTISQIKEMIAFV  195 (431)
T ss_dssp             CCTTHHHHTTSSSCSSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCC-TTEEEEEEECSCTTSSSCCCCHHHHHHHHHHH
T ss_pred             CchhHHHHHhhcccccchHHHcCCEEEEeCCCCCCCcCHHHHHhhcC-CCCeEEEEECCCCCCCCCcCCHHHHHHHHHHH
Confidence            998877554          3479999999987778899999999997 689999999 69999999999888877764  


Q ss_pred             ----CCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcc-ccccceeeecCHHHHHHHHHhcCC--C----CC
Q 014594          246 ----MPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL-AGLRVGYGAFPLSIIEYLWRAKQP--Y----NV  314 (422)
Q Consensus       246 ----~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~r~G~i~~~~~~~~~l~~~~~~--~----~~  314 (422)
                          .|+++|+||+|..+........    .+.+++++|+||.+|. .+...||+++++++++.+......  +    +.
T Consensus       196 ~~~~~~~~livDea~~~~~~~~~~~~----~g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~  271 (431)
T 3ht4_A          196 KEIKPDVVVFVDNCYGEFIEEQEPCH----VGADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGA  271 (431)
T ss_dssp             HHHCTTCEEEEECTTCTTSSSCCGGG----TTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSC
T ss_pred             HhhCCCCEEEEeCCChhhccCCCccc----cCCeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhccCCcccccCc
Confidence                3899999999998875333221    2345899999998653 224459999999999998764432  1    11


Q ss_pred             cHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCce-----EEEEEeCCCCCHHHHHHHHHhC
Q 014594          315 SVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSN-----FILCEVTSGMDAKKLKDDLAKM  385 (422)
Q Consensus       315 ~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~-----f~~~~~~~~~~~~~~~~~L~~~  385 (422)
                      +.....++...+   .... +.++..++.+++.+.|+++++. +.|....     .+.+.+++.....++++.|.+.
T Consensus       272 ~~~~~~~~~~~l---~~~~~~~~~~~~~a~~l~~~L~~~g~~-v~p~~~~~~~~li~~i~l~~~~~~~~~~~~l~~~  344 (431)
T 3ht4_A          272 SLYSLQEMYQGF---FLAPHVAGQALKGAIFTAAFLEKLGMN-TSPAWNAPRTDLIQSVQFDDKDRMIAFCQAIQYA  344 (431)
T ss_dssp             CCSCSHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHTCC-EESCTTSCCSSSCCEEECCCHHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHhHh---hhHHHHHHHHHHHHHHHHHHHHhCcCE-ecCCCCCCCccEEEEEEeCCHHHHHHHHHHHHhc
Confidence            111122222222   2234 6777888899999999988753 3443332     6677876444566788888865

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=99.90  E-value=6.5e-22  Score=199.77  Aligned_cols=296  Identities=13%  Similarity=0.070  Sum_probs=204.8

Q ss_pred             CCC-CCcchHHHHHHH----HHHcCCC--CCCEEEeCCHHHHHHHHHHHhcC--------------CCCEEEEcCCCchh
Q 014594          124 YIY-PDPESRRLRAAL----AKDSGLE--SDHILVGCGADELIDLIMRCVLD--------------PGDKIVDCPPTFTM  182 (422)
Q Consensus       124 ~~y-~~~~~~~lr~~l----a~~~~~~--~~~i~~~~G~~~al~~~~~~l~~--------------~gd~Vl~~~p~y~~  182 (422)
                      ..| ..++..++++++    ++++|.+  ++.+++++|+++++..++.+..+              +++.|+++.++|..
T Consensus       125 ~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s  204 (511)
T 3vp6_A          125 FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYS  204 (511)
T ss_dssp             SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTH
T ss_pred             CCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHH
Confidence            445 345556666655    5556876  46899999999999988877654              56789999999999


Q ss_pred             HHHHHHHcCC---EEEEecCCCCCCCCHHHHHHHhhcCC-----CeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEc
Q 014594          183 YEFDAAVNGA---AVVKVPRKSDFSLNVELIADAVEREK-----PKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLD  253 (422)
Q Consensus       183 ~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~~~-----~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~D  253 (422)
                      +...++..|+   +++.++.+.++.+|+++|++++++.+     +++|++++|+||||.+.+.++|.+||+. |+++++|
T Consensus       205 ~~~~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD  284 (511)
T 3vp6_A          205 IKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVD  284 (511)
T ss_dssp             HHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEE
T ss_pred             HHHHHHHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEE
Confidence            9999999998   89999988888999999999996421     8899999999999999999999999987 9999999


Q ss_pred             cCCccccCC-Cchhhhhh-cCCcEEEEccChhhhccccccceeeecCH-HHHHHHHHhcCCC------------------
Q 014594          254 EAYTEFSGL-ESRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPY------------------  312 (422)
Q Consensus       254 eay~~~~~~-~~~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~~l~~~~~~~------------------  312 (422)
                      ++|...... +.....+. ......++.+++|.++.+ ..+|+++++. ++++........|                  
T Consensus       285 ~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~  363 (511)
T 3vp6_A          285 AAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKA  363 (511)
T ss_dssp             ETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGS
T ss_pred             ccchhhHhhChhhhhhccCCccCCEEEECcccccCCC-cCeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCC
Confidence            999865421 11111111 112246677999987744 5688887754 4555543221111                  


Q ss_pred             -----CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccC---CCceEEEEEe-CCCCC--------
Q 014594          313 -----NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYP---SYSNFILCEV-TSGMD--------  374 (422)
Q Consensus       313 -----~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p---~~~~f~~~~~-~~~~~--------  374 (422)
                           ....+...++..++. .++++ +.++..++.+++.+.|++++.+.+..   ...+.+.+++ |.+.+        
T Consensus       364 ~~~~r~~~al~~~~al~~~g-~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~  442 (511)
T 3vp6_A          364 IQCGRHVDIFKFWLMWKAKG-TVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQR  442 (511)
T ss_dssp             SCSSCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHH
T ss_pred             CCCCCchHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhH
Confidence                 012344555555553 34555 88899999999999999886565432   3444455543 32221        


Q ss_pred             -------HHHHHHHHHhCCcEEEeCCC-CCCCCeEEEEec----ChhhHHHHHHHHhhh
Q 014594          375 -------AKKLKDDLAKMGVMIRHYNN-KELKGYVRVSVG----KPEHTDALMECLMHL  421 (422)
Q Consensus       375 -------~~~~~~~L~~~gI~v~~~~~-~~~~~~iRis~~----~~~~~~~l~~al~~l  421 (422)
                             ..++.+.|.++|+.+..... ....+++|++++    +.++++.+.++++++
T Consensus       443 ~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~  501 (511)
T 3vp6_A          443 REKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERL  501 (511)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence                   23688888888876554221 223458999984    345566666666653

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.89  E-value=4.1e-22  Score=207.33  Aligned_cols=287  Identities=11%  Similarity=0.107  Sum_probs=198.8

Q ss_pred             CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH-HHHcCCEEEEecCC-CCCC
Q 014594          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD-AAVNGAAVVKVPRK-SDFS  204 (422)
Q Consensus       127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~~~~g~~~~~v~~~-~~~~  204 (422)
                      ++....++++.+|+++|.+ ..+++++|+++++..++.+++++||+|+++.|+|..+... ++..|++++.++.. ++++
T Consensus       171 ~~~~i~e~e~~lA~~~gae-~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~~~~~  249 (730)
T 1c4k_A          171 HEGPAVAAEKHAARVYNAD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPYG  249 (730)
T ss_dssp             TBTHHHHHHHHHHHHTTCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEECTTC
T ss_pred             ChHHHHHHHHHHHHHHCCC-cEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCccccC
Confidence            4444789999999999976 3588999999999999999999999999999999887776 77899999988743 2333


Q ss_pred             ----CCHHHH-----HHHhhcCC-----C----eEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccc-cCCCc
Q 014594          205 ----LNVELI-----ADAVEREK-----P----KCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGLES  264 (422)
Q Consensus       205 ----~d~~~l-----~~~i~~~~-----~----~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~-~~~~~  264 (422)
                          +|+++|     ++++++..     +    |++++++| ||+|.+.+.+++.++++. |+++++||+|... .+.+.
T Consensus       250 i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~~~  328 (730)
T 1c4k_A          250 FIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPM  328 (730)
T ss_dssp             CEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGG
T ss_pred             ccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEcccccccccCcc
Confidence                688888     88886321     4    89999999 589999999999999998 9999999999753 23221


Q ss_pred             -----hhhh---hhcCCcEEEEccChhhhccccccce-eeecCH------------HHHHHHHHhcCCCCCcHHHHHHHH
Q 014594          265 -----RMEW---VKKHDNLIVLRTFSKRAGLAGLRVG-YGAFPL------------SIIEYLWRAKQPYNVSVAAEVAAC  323 (422)
Q Consensus       265 -----~~~~---~~~~~~~i~~~S~SK~~~~~G~r~G-~i~~~~------------~~~~~l~~~~~~~~~~~~~~~aa~  323 (422)
                           .+..   ..+.++++++.|+||.+  +|.+.| ++++++            ..+..........+++....++..
T Consensus       329 ~~g~~~l~~~~~g~D~~~~iv~~S~hK~L--~g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~iaal~  406 (730)
T 1c4k_A          329 MRNSSPLLIDDLGPEDPGIIVVQSVHKQQ--AGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALD  406 (730)
T ss_dssp             GGGGCTTSCCCCCTTSCEEEEEECHHHHS--SCCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHH
T ss_pred             cCCcCcccccccCCCCCCEEEEECCCCCC--CCCCCEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHHHHH
Confidence                 1111   11234679999999974  566655 443321            112222222333455555444443


Q ss_pred             HHcc---CChHHHHHHHHHHHHHHHHHHHcc-CCCCcccCC--------------------------------------C
Q 014594          324 AALQ---NPIYLEVKEALIKERERLFKLLKD-VPFLNPYPS--------------------------------------Y  361 (422)
Q Consensus       324 ~~L~---~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~p~--------------------------------------~  361 (422)
                      ++++   .+...+..+++.++.+++++.|++ ++++.+..+                                      .
T Consensus       407 aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  486 (730)
T 1c4k_A          407 VNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGD  486 (730)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCT
T ss_pred             HHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhccccccCC
Confidence            3333   212223566777788888888877 444443211                                      1


Q ss_pred             c-eE-----EEEEeCC-----------CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          362 S-NF-----ILCEVTS-----------GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       362 ~-~f-----~~~~~~~-----------~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      + ++     +.+..|+           +.++..+.+.|.++||.+...+    ...+|++++   +.++++.|.++|+++
T Consensus       487 ~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~~----~~~ir~~~s~g~t~e~i~~Ll~aL~~i  562 (730)
T 1c4k_A          487 NQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKSD----LNSILFLMTPAETPAKMNNLITQLLQL  562 (730)
T ss_dssp             TCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEEC----SSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             cccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEECC----CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            1 22     4566642           4678999999999999987653    478899875   456678888888764

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=99.88  E-value=1.5e-21  Score=188.32  Aligned_cols=301  Identities=10%  Similarity=0.031  Sum_probs=210.4

Q ss_pred             CCCCCCCHHHHHHHhcCCC------------CCCCCCc--chHHHHHHHHHHcCCCC-CCEEE-eCCHHHHHHHHHHHhc
Q 014594          104 ENPYGPPPEVREALGQLKF------------PYIYPDP--ESRRLRAALAKDSGLES-DHILV-GCGADELIDLIMRCVL  167 (422)
Q Consensus       104 ~~~~~~~~~v~~al~~~~~------------~~~y~~~--~~~~lr~~la~~~~~~~-~~i~~-~~G~~~al~~~~~~l~  167 (422)
                      ....+.|++|++++.+...            .++.+..  -..+.|+.+++++++++ ++|++ ++|+|+++++++..++
T Consensus        19 at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~   98 (377)
T 3e77_A           19 YFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLI   98 (377)
T ss_dssp             ECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHG
T ss_pred             cccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhcc
Confidence            3567789999999987311            0111111  14678999999999864 57888 5899999999999998


Q ss_pred             CC--CCEEEEcCCCchh--HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594          168 DP--GDKIVDCPPTFTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (422)
Q Consensus       168 ~~--gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i  243 (422)
                      .+  ||+|++..-++..  +...++..|..++.++.++++..+++.++..++ +++++|.++|.+|.||.+.|.     |
T Consensus        99 ~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~-~~t~lV~~~h~et~tG~~~pi-----i  172 (377)
T 3e77_A           99 GLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLN-PDASYVYYCANETVHGVEFDF-----I  172 (377)
T ss_dssp             GGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCC-TTCSCEEEESEETTTTEECSS-----C
T ss_pred             CCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccCCCcCCCCChHHhccC-CCccEEEEeCccCchheEchh-----h
Confidence            65  8998877665543  334455678887777776666778887777776 789999999999999999997     4


Q ss_pred             HcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHH-------------H-Hh
Q 014594          244 LEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL-------------W-RA  308 (422)
Q Consensus       244 ~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l-------------~-~~  308 (422)
                      ++. |+++++|.+++.....    -.+...+  +++.|..|.+|.+|  +|++++++++++.+             . ..
T Consensus       173 ~~~~~~~~~vD~~q~~g~~~----id~~~~~--~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~  244 (377)
T 3e77_A          173 PDVKGAVLVCDMSSNFLSKP----VDVSKFG--VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPSVLEYKVQAGNS  244 (377)
T ss_dssp             CCCTTCCEEEECTTTTTSSC----CCGGGCS--EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCGGGCHHHHHTTT
T ss_pred             hccCCCEEEEEcccccCCCC----CchhhcC--EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCchhhHHHHhhcC
Confidence            555 9999999998843321    1122333  46678899998777  78888765543211             1 11


Q ss_pred             cCCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCcccC----CC-ceEEEEEeCCCCC--H--
Q 014594          309 KQPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPYP----SY-SNFILCEVTSGMD--A--  375 (422)
Q Consensus       309 ~~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p----~~-~~f~~~~~~~~~~--~--  375 (422)
                      ..+++++....+++.++|+.   ...++ +.++.++..+++++.|++++++.+.+    .. +..+.+.+++ .+  .  
T Consensus       245 ~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~-~~~~~~~  323 (377)
T 3e77_A          245 SLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGN-AKGDDAL  323 (377)
T ss_dssp             TCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESS-TTCCHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCC-CCCchhH
Confidence            22356777776666666652   32455 88899999999999999986555322    12 2347778873 22  1  


Q ss_pred             -HHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          376 -KKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       376 -~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                       ..+.+.|.++||.++++..  ..+.+|+|+.   +.++++.|.++|+++
T Consensus       324 ~~~~l~~l~~~Gi~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~  371 (377)
T 3e77_A          324 EKRFLDKALELNMLSLKGHR--SVGGIRASLYNAVTIEDVQKLAAFMKKF  371 (377)
T ss_dssp             HHHHHHHHHHTTEESCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCcEEeCCCC--cCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence             3577788889999887653  2457999986   467788888888764

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.87  E-value=8.5e-21  Score=199.05  Aligned_cols=287  Identities=14%  Similarity=0.091  Sum_probs=196.9

Q ss_pred             CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC-CCC-
Q 014594          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFS-  204 (422)
Q Consensus       127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~-  204 (422)
                      +.....++++.+++++|.+ +.+++++|+++++..++.+++++||+|+++.|+|..+...+...|++++.++.+. +++ 
T Consensus       203 ~~g~v~~~ee~la~l~G~d-~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~~~g~  281 (755)
T 2vyc_A          203 HTGAFGESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGI  281 (755)
T ss_dssp             TCHHHHHHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBCTTSC
T ss_pred             CccHHHHHHHHHHHHhCCC-ceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCCcccc
Confidence            3444678999999999975 4688999999999999999999999999999999988888888999999998543 233 


Q ss_pred             ---C-----CHHHHHHHhhc-CCCe--------EEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCC--
Q 014594          205 ---L-----NVELIADAVER-EKPK--------CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLE--  263 (422)
Q Consensus       205 ---~-----d~~~l~~~i~~-~~~~--------~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~--  263 (422)
                         +     |++.+++++++ ++++        +++++|| ||+|.+.+.+++.++|+. |+++++||+|..+. +.+  
T Consensus       282 ~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~~~~  360 (755)
T 2vyc_A          282 IGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIY  360 (755)
T ss_dssp             BCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGCGGG
T ss_pred             ccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchhcccCccc
Confidence               4     99999999964 2444        8999998 799999999999999998 99999999997532 221  


Q ss_pred             ---chhhh--hh-cCCcEEEEccChhhhcccccc-ceeeecCHH-------HHHHHHHhcCCCCCcHHHHHHHHHH---c
Q 014594          264 ---SRMEW--VK-KHDNLIVLRTFSKRAGLAGLR-VGYGAFPLS-------IIEYLWRAKQPYNVSVAAEVAACAA---L  326 (422)
Q Consensus       264 ---~~~~~--~~-~~~~~i~~~S~SK~~~~~G~r-~G~i~~~~~-------~~~~l~~~~~~~~~~~~~~~aa~~~---L  326 (422)
                         .....  .+ ..++++++.|+||.+  +|.+ .|+++++.+       ............+++.....+..++   +
T Consensus       361 ~~~~~~~g~~aD~~~~~~iv~~S~hK~L--~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~aA~~~l  438 (755)
T 2vyc_A          361 ADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMM  438 (755)
T ss_dssp             TTSSSSCSCCCCCSSBEEEEEEETTTSS--SCCTTCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHH
T ss_pred             CCcchhcCCcCCccCCCeEEEECccccc--cCcCCeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence               11111  12 235678999999964  5666 556655432       1222222233345565544444444   3


Q ss_pred             cCChHHHHHHHHHHHHHHHHHHHccCCC---------Cccc-CC------------------------------------
Q 014594          327 QNPIYLEVKEALIKERERLFKLLKDVPF---------LNPY-PS------------------------------------  360 (422)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~---------~~~~-p~------------------------------------  360 (422)
                      ...+..+..+++.++.+++++.|++++.         +.+. |.                                    
T Consensus       439 ~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  518 (755)
T 2vyc_A          439 DGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESW  518 (755)
T ss_dssp             STHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTT
T ss_pred             HhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhhhccCccccc
Confidence            3321222444555555555555544321         2111 00                                    


Q ss_pred             -------Cc------eEEEEEeCC----------CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHH
Q 014594          361 -------YS------NFILCEVTS----------GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDAL  414 (422)
Q Consensus       361 -------~~------~f~~~~~~~----------~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l  414 (422)
                             .+      .-+.+.+++          +.++..+.+.|.++||.+...+    .+.+|++++   +.++.+.|
T Consensus       519 h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~~~----~~~v~~~~~~g~t~~~~~~l  594 (755)
T 2vyc_A          519 HGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTT----DFQIMFLFSMGVTRGKWGTL  594 (755)
T ss_dssp             TCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEEC----SSEEEEECCTTCCTTTTHHH
T ss_pred             ccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEeecC----CCeEEEEECCCCCHHHHHHH
Confidence                   11      124556653          4677899999999999886543    578999875   46667888


Q ss_pred             HHHHhhh
Q 014594          415 MECLMHL  421 (422)
Q Consensus       415 ~~al~~l  421 (422)
                      .++|+++
T Consensus       595 ~~al~~~  601 (755)
T 2vyc_A          595 VNTLCSF  601 (755)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8888765

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=99.86  E-value=8.2e-21  Score=190.47  Aligned_cols=294  Identities=11%  Similarity=0.034  Sum_probs=202.0

Q ss_pred             CCC-CCcchHHHHHHHHH----HcCCCCC----------CEEEeCCHHHHHHHHHHHhcC-------------------C
Q 014594          124 YIY-PDPESRRLRAALAK----DSGLESD----------HILVGCGADELIDLIMRCVLD-------------------P  169 (422)
Q Consensus       124 ~~y-~~~~~~~lr~~la~----~~~~~~~----------~i~~~~G~~~al~~~~~~l~~-------------------~  169 (422)
                      ..| ..++..++++.+.+    .+|.+.+          ..++|+|+++++..++.+..+                   +
T Consensus       108 ~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~  187 (481)
T 4e1o_A          108 FTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNA  187 (481)
T ss_dssp             SSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHT
T ss_pred             CCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccC
Confidence            445 45666777776655    4576542          578999999999888775532                   5


Q ss_pred             CCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCC-----CeEEEEeCCCCccCcCCCHHHHHHHH
Q 014594          170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREK-----PKCIFLTSPNNPDGSIINDEDLLKIL  244 (422)
Q Consensus       170 gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~-----~~~i~l~~p~NPtG~~~~~e~l~~i~  244 (422)
                      ++.|+++.++|..+...+...|++++.+|.++++.+|+++|++++++.+     +.+|++++++|+||.+-+.++|.++|
T Consensus       188 ~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la  267 (481)
T 4e1o_A          188 RLVAYASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPIC  267 (481)
T ss_dssp             TEEEEEETTSCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHH
T ss_pred             CeEEEEcCcchHHHHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHH
Confidence            6789999999999999998899999999988888999999999996421     67788889999999999999999999


Q ss_pred             cC-CCeEEEccCCccccC-CCchhhhhh-cCCcEEEEccChhhhccccccceeeecC-HHHHHHHHHhcCC---------
Q 014594          245 EM-PILVVLDEAYTEFSG-LESRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP---------  311 (422)
Q Consensus       245 ~~-~~~li~Deay~~~~~-~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~---------  311 (422)
                      +. |+++++|++|..+.. .+....... ......+..+++|.++.| ..+|++++. ++.+.........         
T Consensus       268 ~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~  346 (481)
T 4e1o_A          268 AREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVH-FDCTGFWVKDKYKLQQTFSVNPIYLRHANSGV  346 (481)
T ss_dssp             HHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESBHHHHHTTTCCCCGGGCCTTTTT
T ss_pred             HHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCC-CceEEEEEeCHHHHHHHhcCCchhccCcccCC
Confidence            98 999999999986532 111111111 111235667899987754 456776664 4443321111100         


Q ss_pred             ----------C--CCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC-CCCHH
Q 014594          312 ----------Y--NVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAK  376 (422)
Q Consensus       312 ----------~--~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~-~~~~~  376 (422)
                                .  ....+.+.++..++.. +.++ +.++..++++++.+.|++++.+.+ .+...+++++++++ +....
T Consensus       347 ~~~~~~~~~~~~r~~~~l~~~~al~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~  425 (481)
T 4e1o_A          347 ATDFMHWQIPLSRRFRSVKLWFVIRSFGV-KNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPNSLTE  425 (481)
T ss_dssp             SCCGGGGSSSSCCCCTHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEEESSCHHHHH
T ss_pred             CCCcccccccCCCCccHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEeCCchHHHH
Confidence                      0  1134555656665543 3444 888899999999999999866664 45667888888863 22356


Q ss_pred             HHHHHHHhCCc-EEEeCCCCCCCCeEEEEecC----hhhHHHHHHHHhh
Q 014594          377 KLKDDLAKMGV-MIRHYNNKELKGYVRVSVGK----PEHTDALMECLMH  420 (422)
Q Consensus       377 ~~~~~L~~~gI-~v~~~~~~~~~~~iRis~~~----~~~~~~l~~al~~  420 (422)
                      ++.+.|.++|+ .+.+.. ..+..++|++++.    .++++++.++|++
T Consensus       426 ~l~~~L~~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~~di~~~~~~i~~  473 (481)
T 4e1o_A          426 NVLKEIAKAGRLFLIPAT-IQDKLIIRFTVTSQFTTRDDILRDWNLIRD  473 (481)
T ss_dssp             HHHHHHHHHCSSBCEEEE-ETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCeEEEEeeE-ECCEEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence            78888887774 444332 2335689999763    3345555554443

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.86  E-value=3e-20  Score=178.62  Aligned_cols=303  Identities=13%  Similarity=0.073  Sum_probs=209.4

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcC-CC-----------CCCCCCc--chHHHHHHHHHHcCCC-CCCEEE-eCCHHHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQL-KF-----------PYIYPDP--ESRRLRAALAKDSGLE-SDHILV-GCGADELI  159 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~-----------~~~y~~~--~~~~lr~~la~~~~~~-~~~i~~-~~G~~~al  159 (422)
                      +++.|..  .|.+.+++|++++.+. ..           .++-+..  -..+.|+.++++++++ +++|++ |+|+|+++
T Consensus         5 ~~~~f~p--gpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~   82 (361)
T 3m5u_A            5 RKINFSA--GPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQF   82 (361)
T ss_dssp             CCEECCS--SSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred             ceEeecC--CCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHH
Confidence            3455655  4455679999999863 21           1111111  2567899999999985 457888 99999999


Q ss_pred             HHHHHHhcCCCCEEE-EcCCCch-hHHHHHHHcCCEEEEecCCCCCC--CCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594          160 DLIMRCVLDPGDKIV-DCPPTFT-MYEFDAAVNGAAVVKVPRKSDFS--LNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (422)
Q Consensus       160 ~~~~~~l~~~gd~Vl-~~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~--~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (422)
                      ++++..++ +||+++ +....|. .+...++..|+++..++.+++..  ++++.  + ++ +++++|.++|.+|.||.+.
T Consensus        83 n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~--~-l~-~~t~lv~~~~~e~~tG~~~  157 (361)
T 3m5u_A           83 AMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV--E-FS-DNADYAYICSNNTIYGTQY  157 (361)
T ss_dssp             HHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC--C-CC-TTSSEEEEESEETTTTEEC
T ss_pred             HHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh--h-cC-CCCCEEEEeCCCCCcceeC
Confidence            99999988 788653 3333342 33445667899999988665543  56666  3 76 7899999999999999997


Q ss_pred             CHHHHHHHHcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHH--------
Q 014594          236 NDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR--------  307 (422)
Q Consensus       236 ~~e~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~--------  307 (422)
                      +.     |++.|+++++|.+++.....-.    +.  +-.+++.|..|.+|.+|  +|++++++++++.+..        
T Consensus       158 ~~-----i~~~~~~~~vD~~q~~g~~~id----~~--~~d~~~~s~~K~~gp~G--~g~l~~~~~~~~~~~~~~~p~~~~  224 (361)
T 3m5u_A          158 QN-----YPKTKTPLIVDASSDFFSRKVD----FS--NIALFYGGVQKNAGISG--LSCIFIRKDMLERSKNKQIPSMLN  224 (361)
T ss_dssp             SS-----CCCCSSCEEEECGGGTTSSCCC----CT--TEEEEEEETTTTSSCTT--CEEEEEEHHHHHHHHTCCCCGGGC
T ss_pred             Cc-----ccccCCEEEEEcccccCCCCCC----cc--cCCEEEEechhccCCCc--cEEEEEcHHHHhhhcCCCCCceee
Confidence            72     5555999999999874332111    11  12377789999998777  7999999988766532        


Q ss_pred             -------hcCCCCCcHHHHHHHHHHcc---CChHHH-HHHHHHHHHHHHHHHHccCCCC-ccc-CC---CceEEEEEeCC
Q 014594          308 -------AKQPYNVSVAAEVAACAALQ---NPIYLE-VKEALIKERERLFKLLKDVPFL-NPY-PS---YSNFILCEVTS  371 (422)
Q Consensus       308 -------~~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~~~~~~~~~l~~~L~~~~~~-~~~-p~---~~~f~~~~~~~  371 (422)
                             ...+++++.....++.++|+   ....++ +.++.++.++++++.|++++.+ ... +.   ....+.+.+|+
T Consensus       225 ~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~  304 (361)
T 3m5u_A          225 YLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAK  304 (361)
T ss_dssp             HHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESS
T ss_pred             hHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCC
Confidence                   11225667766666666654   331355 8889999999999999998844 322 11   23456778874


Q ss_pred             --CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          372 --GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       372 --~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                        +.+ .++...|.++||.++.+..  ..+.+|+|+.   +.++++++.++|+++
T Consensus       305 ~~~~~-~~~~~~L~~~gI~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~  356 (361)
T 3m5u_A          305 NKDLE-PLFVKEAEEAGMIGLKGHR--ILGGIRASIYNALNLDQVKTLCEFMKEF  356 (361)
T ss_dssp             CTTHH-HHHHHHHHHTTEECCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             chhhh-HHHHHHHHHCCCEEecCCC--ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence              233 4788888899999887653  2256999986   467788888888765

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=99.86  E-value=3.5e-21  Score=186.76  Aligned_cols=300  Identities=12%  Similarity=0.026  Sum_probs=201.5

Q ss_pred             CCCCCCHHHHHHHhcCC-C-----------CCCCCC--cchHHHHHHHHHHcCCCC-CCEEE-eCCHHHHHHHHHHHhcC
Q 014594          105 NPYGPPPEVREALGQLK-F-----------PYIYPD--PESRRLRAALAKDSGLES-DHILV-GCGADELIDLIMRCVLD  168 (422)
Q Consensus       105 ~~~~~~~~v~~al~~~~-~-----------~~~y~~--~~~~~lr~~la~~~~~~~-~~i~~-~~G~~~al~~~~~~l~~  168 (422)
                      .+.+.+++|++++.+.. .           .++.+.  .-..+.|+.++++++++. ++|++ |+|+|+++++++..+++
T Consensus        34 gpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~  113 (386)
T 3qm2_A           34 GPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLG  113 (386)
T ss_dssp             SSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCT
T ss_pred             CCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccC
Confidence            34556899999997631 1           011121  135789999999999854 47888 69999999999999999


Q ss_pred             CCCEEEEcCCCch--hHHHHHHHcCCEEEEecCC---CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcC-CCHHHHHH
Q 014594          169 PGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI-INDEDLLK  242 (422)
Q Consensus       169 ~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~-~~~e~l~~  242 (422)
                      +||+|++..-++.  .+...++..| ++..++.+   ++..+|++.++.+++ +++++|.++|.+|.||.+ .|.+++. 
T Consensus       114 ~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~-~~t~lV~~~h~et~tG~~i~pi~~i~-  190 (386)
T 3qm2_A          114 DKTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLS-DNAAYLHYCPNETIDGIAIDETPDFG-  190 (386)
T ss_dssp             TCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCC-TTCSCEEECSEETTTTEECCCCCCCC-
T ss_pred             CCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcC-CCCcEEEEECCcCCcCEecCchhhhc-
Confidence            9999865444443  3334455678 88888865   333378888888886 789999999999999996 7766653 


Q ss_pred             HHcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHH-------------HH-h
Q 014594          243 ILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL-------------WR-A  308 (422)
Q Consensus       243 i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l-------------~~-~  308 (422)
                         .|+++++|.+++.....    -.+...+  +.+.|..|.+|.+|  +|++++++++++.+             .. .
T Consensus       191 ---~g~~~~vDa~qs~g~~p----idv~~~~--~~~~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~  259 (386)
T 3qm2_A          191 ---PEVVVTADFSSTILSAP----LDVSRYG--VIYAGAQKNIGPAG--LTLVIVREDLLGKAHESCPSILDYTVLNDND  259 (386)
T ss_dssp             ---TTCCEEEECTTTTTSSC----CCGGGCS--EEEEETTTTTCCTT--EEEEEEEGGGCSCCCTTSCGGGCHHHHHHC-
T ss_pred             ---CCCEEEEEcccccCCCC----CCccccC--EEEEecccccCCCc--cEEEEECHHHHhhhcccCCcHHHHHHHhhcC
Confidence               59999999998843321    1122333  45678899998777  78888876653211             11 1


Q ss_pred             cCCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCccc--C--CCceEEEEEeCC-CCCHHHHH
Q 014594          309 KQPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPY--P--SYSNFILCEVTS-GMDAKKLK  379 (422)
Q Consensus       309 ~~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~--p--~~~~f~~~~~~~-~~~~~~~~  379 (422)
                      ..+++++.....++.++++.   ...++ +.++.++.++++++.|+++++....  +  .....+.+.+++ +.+ ..+.
T Consensus       260 ~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~~~~-~~~~  338 (386)
T 3qm2_A          260 SMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNTLD-KVFL  338 (386)
T ss_dssp             ------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSGGGH-HHHH
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCcccc-HHHH
Confidence            12235555555555555542   21355 8889999999999999988642221  1  123467778874 344 6777


Q ss_pred             HHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          380 DDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       380 ~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      ..|.++||.++.+...  .+.+|+|+.   +.+++|+|.++|+++
T Consensus       339 ~~L~~~gI~~~~g~~~--~~~iRiS~~~~~t~edId~l~~~l~~~  381 (386)
T 3qm2_A          339 EESFAAGLHALKGHRV--VGGMRASIYNAMPIEGVKALTDFMIDF  381 (386)
T ss_dssp             HHHHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCEEeCCCCC--cCeEEEEcCCCCCHHHHHHHHHHHHHH
Confidence            8888999998876432  356999986   467788888888765

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=99.85  E-value=3.9e-20  Score=185.17  Aligned_cols=294  Identities=8%  Similarity=-0.030  Sum_probs=196.8

Q ss_pred             CCC-CCcchHHHHHHH----HHHcCCCCC---------CEEEeCCHHHHHHHHHHHhcC-------------------CC
Q 014594          124 YIY-PDPESRRLRAAL----AKDSGLESD---------HILVGCGADELIDLIMRCVLD-------------------PG  170 (422)
Q Consensus       124 ~~y-~~~~~~~lr~~l----a~~~~~~~~---------~i~~~~G~~~al~~~~~~l~~-------------------~g  170 (422)
                      ..| ..++..++++++    ++++|.+.+         ..++|+|+++++..++.+..+                   ++
T Consensus       103 ~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~  182 (475)
T 3k40_A          103 FTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGK  182 (475)
T ss_dssp             SSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHH
T ss_pred             cCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCC
Confidence            335 445666676665    555677543         689999999998877775421                   34


Q ss_pred             CEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCCHHHHHHHHc
Q 014594          171 DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILE  245 (422)
Q Consensus       171 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~e~l~~i~~  245 (422)
                      +.|+++.++|..+...++..|++++.+|.++++ +|+++|++++++.     .+.+|++++++|+||.+.+.++|.++|+
T Consensus       183 ~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~  261 (475)
T 3k40_A          183 LVGYCSDQAHSSVERAGLLGGVKLRSVQSENHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGN  261 (475)
T ss_dssp             EEEEEETTSCHHHHHHHHHHTCEEEEECCBTTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHH
T ss_pred             eEEEECCCchHHHHHHHHHcCCceEEEECCCCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHH
Confidence            689999999999999999999999999987788 9999999999642     1677888899999999999999999998


Q ss_pred             C-CCeEEEccCCccccC-CCchhhhhh-cCCcEEEEccChhhhccccccceeeecCH-HHHH-HHHHhcC----------
Q 014594          246 M-PILVVLDEAYTEFSG-LESRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIE-YLWRAKQ----------  310 (422)
Q Consensus       246 ~-~~~li~Deay~~~~~-~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~-~l~~~~~----------  310 (422)
                      . |+++++|++|..... .+....... ......+..+++|.++. ...+|+++++. +.+. .+.....          
T Consensus       262 ~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~-p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~  340 (475)
T 3k40_A          262 KHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLV-NFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSA  340 (475)
T ss_dssp             HTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSC-CSSCEEEEESSGGGC-------------------
T ss_pred             HhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCC-CCceEEEEEeCHHHHHHHhcCCccccCCCcCCCC
Confidence            7 999999999986432 111111111 11224667889997653 35577777653 3322 1110000          


Q ss_pred             ----CCC------CcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC-CCCHHHH
Q 014594          311 ----PYN------VSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKL  378 (422)
Q Consensus       311 ----~~~------~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~-~~~~~~~  378 (422)
                          .++      ...+.+.++...+....+.++.++..++++++.+.|++++.+.+ .+...+.+++++++ +....++
T Consensus       341 ~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f~~~~~~~~~~~l  420 (475)
T 3k40_A          341 PDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGSNERNEAL  420 (475)
T ss_dssp             --------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEESSCHHHHHHH
T ss_pred             CCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEeCCchHHHHHH
Confidence                010      12344455555554333333888899999999999999866654 45567788888863 2235788


Q ss_pred             HHHHHhCCcE-EEeCCCCCCCCeEEEEecC----hhhHHHHHHHHhh
Q 014594          379 KDDLAKMGVM-IRHYNNKELKGYVRVSVGK----PEHTDALMECLMH  420 (422)
Q Consensus       379 ~~~L~~~gI~-v~~~~~~~~~~~iRis~~~----~~~~~~l~~al~~  420 (422)
                      .+.|.++|+. +.+.. ..+..++|++++.    .++++++.++|++
T Consensus       421 ~~~L~~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~~di~~~~~~i~~  466 (475)
T 3k40_A          421 LKRINGRGHIHLVPAK-IKDVYFLRMAICSRFTQSEDMEYSWKEVSA  466 (475)
T ss_dssp             HHHHHHHTSCBCEEEE-ETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHhCCcEEEEeeE-ECCEEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence            8888877654 34322 2235799999863    3455555555543

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.81  E-value=7.6e-18  Score=173.93  Aligned_cols=286  Identities=10%  Similarity=0.112  Sum_probs=192.9

Q ss_pred             CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC-CCCCC
Q 014594          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSL  205 (422)
Q Consensus       127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~  205 (422)
                      |..-..++++.+|+++|.+ ..+++++|++.++..++.+++++||+|+++.++|..+...+...|++++.++.+ +++++
T Consensus       193 ~~g~i~eaE~~lA~~fGa~-~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~~~gi  271 (715)
T 3n75_A          193 HSGPHKEAEQYIARVFNAD-RSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGI  271 (715)
T ss_dssp             TBTHHHHHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCCBCTTCC
T ss_pred             CcHHHHHHHHHHHHHhCCC-CceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecccccccc
Confidence            4334789999999999974 467788888899999999999999999999999999988899999999999843 23443


Q ss_pred             ---------CHHHHHHHhhc-CCCe---EEEEeCCCCccCcCCCHHHHHHHHcCCCeEEEccCCcccc-CCCch--hhhh
Q 014594          206 ---------NVELIADAVER-EKPK---CIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFS-GLESR--MEWV  269 (422)
Q Consensus       206 ---------d~~~l~~~i~~-~~~~---~i~l~~p~NPtG~~~~~e~l~~i~~~~~~li~Deay~~~~-~~~~~--~~~~  269 (422)
                               |++.+++++++ +++|   ++++++| ||+|.+++.+++.++++.. .+++||+|.... +.+..  ....
T Consensus       272 ~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~-~livDEAH~~~~~f~~~~~~~~al  349 (715)
T 3n75_A          272 LGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK-SIHFDSAWVPYTNFSPIYEGKCGM  349 (715)
T ss_dssp             BCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCS-EEEEECTTCTTGGGSGGGTTSSTT
T ss_pred             ccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcC-cEEEccccccccccCCcccccccc
Confidence                     89999999974 2344   8999999 9999999999999999853 379999998653 22211  1111


Q ss_pred             hc---CCcE-EEEccChhhhccccc-cceeeecCHH----HHHHHHHhcCCCCCcHHHHHHHHHHccC---ChHHHHHHH
Q 014594          270 KK---HDNL-IVLRTFSKRAGLAGL-RVGYGAFPLS----IIEYLWRAKQPYNVSVAAEVAACAALQN---PIYLEVKEA  337 (422)
Q Consensus       270 ~~---~~~~-i~~~S~SK~~~~~G~-r~G~i~~~~~----~~~~l~~~~~~~~~~~~~~~aa~~~L~~---~~~~~~~~~  337 (422)
                      ..   .+.+ +++.|++|.++  |+ ..|+++++.+    .+++........+++.+..+++.++++.   ....+++++
T Consensus       350 ~~g~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~~~~~  427 (715)
T 3n75_A          350 SGGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLING  427 (715)
T ss_dssp             SSSCCTTCEEEEEECHHHHSS--CCTTCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred             ccCcCCCEEEEEEeccccccc--CCCCeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccHHHHHH
Confidence            11   2333 56999999864  44 3578777543    3344444445556777666666555532   112225566


Q ss_pred             HHHHHHHHHHHHccCC-----C-Cccc-C------------------------CCceE-----EEEEeCC----------
Q 014594          338 LIKERERLFKLLKDVP-----F-LNPY-P------------------------SYSNF-----ILCEVTS----------  371 (422)
Q Consensus       338 ~~~~~~~l~~~L~~~~-----~-~~~~-p------------------------~~~~f-----~~~~~~~----------  371 (422)
                      +.++.+++++.|++++     | +.+. +                        .+..+     +.+..++          
T Consensus       428 l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~G~~~~~  507 (715)
T 3n75_A          428 SIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGTMSDF  507 (715)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCTTSCBCSS
T ss_pred             HHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCCCCCCCccccC
Confidence            6666666666665442     1 1110 0                        11111     3455542          


Q ss_pred             CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEE--EEec-ChhhHHHHHHHHhhh
Q 014594          372 GMDAKKLKDDLAKMGVMIRHYNNKELKGYVR--VSVG-KPEHTDALMECLMHL  421 (422)
Q Consensus       372 ~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iR--is~~-~~~~~~~l~~al~~l  421 (422)
                      |..+..+.+.|+++||.+--.+.    ..|=  ++++ +.++.++|..+|..+
T Consensus       508 Gi~g~~~~~~L~~~~I~~E~~d~----~~vl~l~s~g~~~~~~~~L~~aL~~~  556 (715)
T 3n75_A          508 GIPASIVAKYLDEHGIVVEKTGP----YNLLFLFSIGIDKTKALSLLRALTDF  556 (715)
T ss_dssp             CCCHHHHHHHHHHTTCCCSEEET----TEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHCCCEEEecCC----CcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            46778999999999998865441    2222  2344 456678888888765

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=99.73  E-value=9.8e-17  Score=158.05  Aligned_cols=314  Identities=16%  Similarity=0.145  Sum_probs=201.4

Q ss_pred             CCCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CCCCCCC--CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~~y--~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~  164 (422)
                      +.+++.+||+..+.  +.++ .+|+|.+|+.+ +..+..+  +.....++.+.|++.+. ..+.+.+++++++|.+.+++
T Consensus        83 D~dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~~~~~~~~~~~~lae~l~~~~p-~~~~v~f~~SGsEA~e~Aik  161 (454)
T 4ao9_A           83 DADGHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGINLTGHNLLEGRLARLICERFP-QIEQLRFTNSGTEANLMALT  161 (454)
T ss_dssp             ETTCCEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCSCCCSEESSHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHH
T ss_pred             ECCCCEEEEccccHHhhcccCCCHHHHHHHHHHHhcCCCccCCcHHHHHHHHHHHHhCC-CCCEEEEeCchHHHHHHHHH
Confidence            45678899997663  3343 57999988876 3332222  33446789999999986 36799999999999999998


Q ss_pred             Hhc--CCCCEEEEcCCCchhHHHHHHH------cCCEEEEecCCCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCccCcC
Q 014594          165 CVL--DPGDKIVDCPPTFTMYEFDAAV------NGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSI  234 (422)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~------~g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~  234 (422)
                      ...  ...++|+....+|+.....+..      .......+|     .-|++.+++.+.+  +++.+|++.......|.+
T Consensus       162 lAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p-----~nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~  236 (454)
T 4ao9_A          162 AALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLP-----YNDAQTARAQIERHGPEIAVVLVEPMQGASGCI  236 (454)
T ss_dssp             HHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEEC-----TTCHHHHHHHHHHTGGGEEEEEECSEESTTTCE
T ss_pred             HHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCC-----CchHHHHHHHHhhcCCceEEEEeccccCCCCcc
Confidence            542  2337899988888753321100      011233333     2378899988864  357788888777778988


Q ss_pred             CC----HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc
Q 014594          235 IN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK  309 (422)
Q Consensus       235 ~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~  309 (422)
                      .+    .+++++||+. |+++|+||++..-.+........+-.++++   +++|.+| .|+.+|.+++++++++.+....
T Consensus       237 ~p~~~fL~~lr~lc~~~g~lLI~DEV~tGR~G~~~a~e~~gv~PDi~---t~gK~lg-gG~Piga~~~~~ei~~~~~~~~  312 (454)
T 4ao9_A          237 PGQPDFLQALRESATQVGALLVFDEVMTSRLAPHGLANKLGIRSDLT---TLGKYIG-GGMSFGAFGGRADVMALFDPRT  312 (454)
T ss_dssp             ECCHHHHHHHHHHHHHHTCEEEEECTTGGGGSTTCHHHHHTCCCSEE---EEEGGGG-TTSSCEEEEECHHHHGGGCTTT
T ss_pred             CCchhhHHHHHHHHhhcCCEEEEECCCcCCCccccchhccCCCCcEE---EeccccC-CCCcceeeeeHHHHHHHHhhcc
Confidence            87    6677778877 999999999974222212222233334444   5689998 7899999999999998775321


Q ss_pred             ------CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CCCCcccCCCceEEEEEeCCC-------
Q 014594          310 ------QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VPFLNPYPSYSNFILCEVTSG-------  372 (422)
Q Consensus       310 ------~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~f~~~~~~~~-------  372 (422)
                            .+|+.|+++.+++.+.|+.-+-.+..++++++.++|.+.|++    .+........|.++.+.+.++       
T Consensus       313 ~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~m~gi~f~~~~~~~~~~  392 (454)
T 4ao9_A          313 GPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEGVAMQFTGIGSLMNAHFVQGDVRSSED  392 (454)
T ss_dssp             CSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEETTEEEEESCCSCCCSGGG
T ss_pred             CCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeeeceEEEEEEecCCCCCHHH
Confidence                  236778998888888775321112444445555555555543    443322334556666665321       


Q ss_pred             ---CC---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHhh
Q 014594          373 ---MD---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLMH  420 (422)
Q Consensus       373 ---~~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~~  420 (422)
                         .+   ...+...|+++||++.|..      .+.++.. +++++|++.+++++
T Consensus       393 ~~~~d~~~~~~~~~~ll~~Gv~~~p~~------~~~~s~~~T~~dId~~l~al~~  441 (454)
T 4ao9_A          393 LAAVDGRLRQLLFFHLLNEDIYSSPRG------FVVLSLPLTDADIDRYVAAIGS  441 (454)
T ss_dssp             GTTCCHHHHHHHHHHHHHTTEECCTTC------EEECCTTCCHHHHHHHHHHHHH
T ss_pred             HHhhhHHHHHHHHHHHHHCCEEEcCCC------CEEEeCCCCHHHHHHHHHHHHH
Confidence               12   2356677889999987643      3444543 45566666666654

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=99.72  E-value=3.9e-16  Score=154.35  Aligned_cols=324  Identities=13%  Similarity=0.125  Sum_probs=202.8

Q ss_pred             CCCCCCeEEcCCC--CCCCC-CCHHHHHHHhc----CCCCCC--CCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHH
Q 014594           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ----LKFPYI--YPDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (422)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~----~~~~~~--y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~  160 (422)
                      +.+++.+||+..+  .+.++ .+|++.+|+.+    +.+...  +|.....+|.+.|++....+ .+.+++++++++|++
T Consensus        60 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e  139 (456)
T 4atq_A           60 DVDGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVE  139 (456)
T ss_dssp             ETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHH
T ss_pred             eCCCCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHH
Confidence            4567889999776  44454 57899888865    223222  24444567888888888643 568999999999999


Q ss_pred             HHHHHh--cCCCCEEEEcCCCchhHHHHHHH-cC-------------CEEEEecCCC------CCCCCHHHHHH------
Q 014594          161 LIMRCV--LDPGDKIVDCPPTFTMYEFDAAV-NG-------------AAVVKVPRKS------DFSLNVELIAD------  212 (422)
Q Consensus       161 ~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~-~g-------------~~~~~v~~~~------~~~~d~~~l~~------  212 (422)
                      .+++.-  .....+|+....+|++....+.. .+             ..+..+|...      ....+.+.+++      
T Consensus       140 ~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e  219 (456)
T 4atq_A          140 NAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIE  219 (456)
T ss_dssp             HHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHH
Confidence            999843  22347899999999755433322 11             1344454211      11122333333      


Q ss_pred             -HhhcCCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhh
Q 014594          213 -AVEREKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKR  284 (422)
Q Consensus       213 -~i~~~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~  284 (422)
                       .+..+++.+|++...+.-.|.+.+    .++++++|+. |+++|.||++..|...+..  ....+-.++++   +++|.
T Consensus       220 ~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDiv---t~gK~  296 (456)
T 4atq_A          220 KQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDII---TMAKG  296 (456)
T ss_dssp             HHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEE---EECGG
T ss_pred             HhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchh---hhhhc
Confidence             222346788988877777787765    4566777776 9999999999987644432  22222334444   45799


Q ss_pred             hccccccceeeecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----CC-----
Q 014594          285 AGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----VP-----  353 (422)
Q Consensus       285 ~~~~G~r~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~~-----  353 (422)
                      +| .|+.+|.+++++++.+.+....  .+|+.++++.+++.+.|+.-+-.+..++.++..+++.+.|++    ++     
T Consensus       297 lg-gg~P~~av~~~~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~  375 (456)
T 4atq_A          297 IA-GGLPLSAITGRADLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDLNGRARHIEELALGKLRELAAELSAGGGS  375 (456)
T ss_dssp             GG-TTSSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred             cc-CcCCceeeEecHHHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhcccccCC
Confidence            87 8899999999999887765432  347889999999988885311000344444444555444443    32     


Q ss_pred             CCcccCCCceEEEEEeCCCC-------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014594          354 FLNPYPSYSNFILCEVTSGM-------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       354 ~~~~~p~~~~f~~~~~~~~~-------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  420 (422)
                      .+.-....|.++.+++....       -...+.+.++++|+++.++..  .++.|||.....-+.++++++++.
T Consensus       376 ~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~g~--~~~~irl~PpL~it~~~id~~l~~  447 (456)
T 4atq_A          376 VVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACLKEGVIILTCGT--YGNVIRLLPPLVISDELLIDGLEV  447 (456)
T ss_dssp             CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECEEECT--TSCEEEECCCTTCCHHHHHHHHHH
T ss_pred             ceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHHHCCCEEEecCC--CCCEEEEECCCCCCHHHHHHHHHH
Confidence            22223456778888874221       145688889999999987542  347899996532222344444433

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=99.65  E-value=7.1e-15  Score=145.88  Aligned_cols=319  Identities=15%  Similarity=0.143  Sum_probs=200.8

Q ss_pred             CCCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-C---CCCCCC---CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-L---KFPYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~---~~~~~y---~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~  160 (422)
                      +.+++.+||+..+.  +.++ .+|++.+|+.+ +   .+.+.+   +.+...+|.+.|++..+.+.+.|++++++++|++
T Consensus        63 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~e  142 (473)
T 4e3q_A           63 DVNGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFPGYHAFFGRMSDQTVMLSEKLVEVSPFDSGRVFYTNSGSEAND  142 (473)
T ss_dssp             ETTCCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCCCCCCCTTEEEHHHHHHHHHHHHHSSCSSCEEEEESSHHHHHH
T ss_pred             eCCCCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhcccccccccccCHHHHHHHHHHHhhCCCCccEEEEeCchHHHHH
Confidence            45678899998774  3333 57888888765 2   221222   2223457888888888766679999999999999


Q ss_pred             HHHHHhc-------CCC-CEEEEcCCCchhHHHHHH-HcCC-----------EEEEecCCC-----CCCCC--------H
Q 014594          161 LIMRCVL-------DPG-DKIVDCPPTFTMYEFDAA-VNGA-----------AVVKVPRKS-----DFSLN--------V  207 (422)
Q Consensus       161 ~~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~-~~g~-----------~~~~v~~~~-----~~~~d--------~  207 (422)
                      .+++...       .++ .+|+....+|++....+. ..|-           ..+.++...     .....        .
T Consensus       143 ~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  222 (473)
T 4e3q_A          143 TMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLA  222 (473)
T ss_dssp             HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHHHHHH
Confidence            9998532       233 578888888875433322 2221           122232111     01111        2


Q ss_pred             HHHHHHhhc---CCCeEEEEeCCCCccCcCCCH----HHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEE
Q 014594          208 ELIADAVER---EKPKCIFLTSPNNPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV  277 (422)
Q Consensus       208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~----e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~  277 (422)
                      +++++.+.+   +++.+|++.....-.|.+.+.    +++++||+. |+++|.||++..|...+..  ....+-.++++ 
T Consensus       223 ~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~-  301 (473)
T 4e3q_A          223 RELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDAI-  301 (473)
T ss_dssp             HHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEE-
T ss_pred             HHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCChH-
Confidence            345555432   356778887777777887763    556667766 9999999999998654432  22233344444 


Q ss_pred             EccChhhhcccc-ccceeeecCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHH
Q 014594          278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFK  347 (422)
Q Consensus       278 ~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~  347 (422)
                        +++|.++ .| +.+|.+++++++.+.+...         ..+|+.|+++.+++.+.|+.-+-....++.++..++|.+
T Consensus       302 --t~~K~l~-gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l~~  378 (473)
T 4e3q_A          302 --ISSKNLT-AGFFPMGAVILGPELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGLAENVRRLAPRFEE  378 (473)
T ss_dssp             --EECGGGG-TTSSCCEEEEECHHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHH
T ss_pred             --Hhccccc-CCCCCcccccccHHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccccHHHHHHHHHHHHHH
Confidence              3579998 55 8999999999999887542         234778999999888887531100145555666666666


Q ss_pred             HHccC---CCCcccCCCceEEEEEeCCC-----------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chhh
Q 014594          348 LLKDV---PFLNPYPSYSNFILCEVTSG-----------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEH  410 (422)
Q Consensus       348 ~L~~~---~~~~~~p~~~~f~~~~~~~~-----------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~  410 (422)
                      .|+++   +.+.-....|.++-+++...           .-...+.+.+.++|+++++..     +.+|+...   +.++
T Consensus       379 ~L~~l~~~~~v~~vRG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g-----~~i~l~PPL~it~~e  453 (473)
T 4e3q_A          379 RLKHIAERPNIGEYRGIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPLG-----QSVVLCPPFILTEAQ  453 (473)
T ss_dssp             HHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEET-----TEEEECCCTTCCHHH
T ss_pred             HHHHHhcCCCeeEEeecceEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEEecC-----CEEEEeCCCCCCHHH
Confidence            66553   33322345567777776321           114678888999999999864     68999854   4444


Q ss_pred             HHHHHHHH
Q 014594          411 TDALMECL  418 (422)
Q Consensus       411 ~~~l~~al  418 (422)
                      +|++.+.+
T Consensus       454 id~~~~~l  461 (473)
T 4e3q_A          454 MDEMFDKL  461 (473)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            44444433

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=99.64  E-value=2e-14  Score=138.01  Aligned_cols=312  Identities=15%  Similarity=0.157  Sum_probs=197.7

Q ss_pred             eEEcCCCCCCCCCCHHHHHHHhcC---CCCCCCCC------cch-HH----HHHHHHHHcCCCCC----CEEEeCCHHHH
Q 014594           97 IVKIDANENPYGPPPEVREALGQL---KFPYIYPD------PES-RR----LRAALAKDSGLESD----HILVGCGADEL  158 (422)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~---~~~~~y~~------~~~-~~----lr~~la~~~~~~~~----~i~~~~G~~~a  158 (422)
                      -|.|=..||-.  ++.|++++...   .+..+||.      ... .+    .++...++||++..    ||-..+|+ +|
T Consensus        56 ~ieLIASEN~~--S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs-~A  132 (490)
T 3ou5_A           56 GLELIASENFC--SRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGS-PA  132 (490)
T ss_dssp             SEECCTTCCCC--CHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH-HH
T ss_pred             CceEecCCCcC--CHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHH-HH
Confidence            48888888866  58999999762   34444542      221 12    23344567898776    56665555 57


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCchhHHHHH--------HHcCC--EEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCC
Q 014594          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDA--------AVNGA--AVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSP  227 (422)
Q Consensus       159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~--------~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p  227 (422)
                      ...++.++++|||+|+..+..+.++....        ...|.  +.+.++.+ ++..+|.|++++...+.+||+|++-.-
T Consensus       133 N~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~kPklIi~G~S  212 (490)
T 3ou5_A          133 NLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTS  212 (490)
T ss_dssp             HHHHHHHHCC-CCCEECBC----------------------------CBCEETTTTEECHHHHHHHHHHHCCSEEEECCS
T ss_pred             HHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCCcccHHHHHHHHhhcCCCeEEECCc
Confidence            77888889999999998887765432111        11222  23333332 456799999999998889999986533


Q ss_pred             CCccCcCCCHHHHHHHHcC-CCeEEEccCCcc-ccCC---CchhhhhhcCCcEEEEccChhhhccccccceeeecCH---
Q 014594          228 NNPDGSIINDEDLLKILEM-PILVVLDEAYTE-FSGL---ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL---  299 (422)
Q Consensus       228 ~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~-~~~~---~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~---  299 (422)
                      .  .-..++.+++++||+. |.++++|.+|.. +...   ++++.    + -.++..|.+|++  .|-|.|.|++++   
T Consensus       213 a--Y~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~----~-ADvVTtTTHKTL--rGPrGG~Il~~~~~~  283 (490)
T 3ou5_A          213 A--YARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK----H-ADIVTTTTHKTL--RGARSGLIFYRKGVK  283 (490)
T ss_dssp             S--CCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG----T-CSEEEEESSSTT--CSCSCEEEEEECSEE
T ss_pred             c--CccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccc----c-ceEEeccccccc--cCCCceEEEeccccc
Confidence            3  3477899999999998 999999999964 2211   22322    2 237788899985  788999999865   


Q ss_pred             ------------HHHHHHHHhcCCCC---CcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHccCCCCccc-CC
Q 014594          300 ------------SIIEYLWRAKQPYN---VSVAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKDVPFLNPY-PS  360 (422)
Q Consensus       300 ------------~~~~~l~~~~~~~~---~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~  360 (422)
                                  ++.+++...-.|..   +..-..++...++.   .+++.+-.+++.++.+.|.+.|.+.|+..+. ..
T Consensus       284 ~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~G~~vvsGgT  363 (490)
T 3ou5_A          284 AVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGT  363 (490)
T ss_dssp             EECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSC
T ss_pred             cccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhCCCeeecCCC
Confidence                        56677776665532   11112222222222   2355557778889999999999998865443 23


Q ss_pred             CceEEEEEeC-CCCCHHHHHHHHHhCCcEEE----eCCC-CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014594          361 YSNFILCEVT-SGMDAKKLKDDLAKMGVMIR----HYNN-KELKGYVRVSVG-------KPEHTDALMECLMH  420 (422)
Q Consensus       361 ~~~f~~~~~~-~~~~~~~~~~~L~~~gI~v~----~~~~-~~~~~~iRis~~-------~~~~~~~l~~al~~  420 (422)
                      +...+++++. .+.+..+..+.|.+.||.+.    |++. +..+..|||+..       .+++++++.+.|.+
T Consensus       364 dnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~  436 (490)
T 3ou5_A          364 DNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDE  436 (490)
T ss_dssp             SSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             CceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHH
Confidence            3345778875 36788888888989999996    4443 334578999963       35666777666543

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=99.63  E-value=7.8e-16  Score=162.66  Aligned_cols=315  Identities=14%  Similarity=0.185  Sum_probs=195.3

Q ss_pred             CeEEcCCC--CCCCC-C-CHHHHHHHhc-C---CCCC--CCCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHHHH
Q 014594           96 DIVKIDAN--ENPYG-P-PPEVREALGQ-L---KFPY--IYPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMR  164 (422)
Q Consensus        96 ~~i~l~~~--~~~~~-~-~~~v~~al~~-~---~~~~--~y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~~~~~  164 (422)
                      +++|+.++  .+.++ . +|++.+|+.+ +   .+..  .+..+...+|.++|++..+-. .+.++++++|++|++.+++
T Consensus       381 ~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~h~~~~~~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~AlK  460 (831)
T 4a0g_A          381 QQFDACASWWTQGPDPTFQAELAREMGYTAARFGHVMFPENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALK  460 (831)
T ss_dssp             EEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHSSCCCTTEECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHHHH
T ss_pred             heeeecccHhhcCCCCCCCHHHHHHHHHHHhhcccccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHHHH
Confidence            57787765  34444 3 6888888865 2   2211  122233567888888888643 4689999999999999988


Q ss_pred             Hhc-----CCC------------CEEEEcCCCchhHHHHH-HHcCC---------------EE-------------EEec
Q 014594          165 CVL-----DPG------------DKIVDCPPTFTMYEFDA-AVNGA---------------AV-------------VKVP  198 (422)
Q Consensus       165 ~l~-----~~g------------d~Vl~~~p~y~~~~~~~-~~~g~---------------~~-------------~~v~  198 (422)
                      ...     ..|            .+|+....+|++-...+ ...|.               .+             ..++
T Consensus       461 ~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  540 (831)
T 4a0g_A          461 MAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNIS  540 (831)
T ss_dssp             HHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEE
T ss_pred             HHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCceEec
Confidence            542     122            36888888887443332 22221               00             1112


Q ss_pred             CCCCCC---------CC------------------HHHHHHHhhc-------CCCeEEEEeCC-CCccCcCCC----HHH
Q 014594          199 RKSDFS---------LN------------------VELIADAVER-------EKPKCIFLTSP-NNPDGSIIN----DED  239 (422)
Q Consensus       199 ~~~~~~---------~d------------------~~~l~~~i~~-------~~~~~i~l~~p-~NPtG~~~~----~e~  239 (422)
                      ....+.         -|                  .+.|++.+.+       .++.+|++... ++..|...+    .++
T Consensus       541 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~  620 (831)
T 4a0g_A          541 LPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRV  620 (831)
T ss_dssp             CCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHH
T ss_pred             CCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHH
Confidence            111100         01                  2567777642       35678888765 788888774    455


Q ss_pred             HHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhcccc-ccceeeecCHHHHHHHHHh-------
Q 014594          240 LLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA-------  308 (422)
Q Consensus       240 l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~-------  308 (422)
                      +.++|+. |+++|+||++..|...+..  ....+..++++   +++|.++ .| +++|++++++++++.+...       
T Consensus       621 l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDii---tlsK~L~-gG~~Plgav~~~~~i~~~~~~~~~~~~~~  696 (831)
T 4a0g_A          621 LVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIA---CFAKLLT-GGMVPLAVTLATDAVFDSFSGDSKLKALL  696 (831)
T ss_dssp             HHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSEE---EECGGGG-TTSSCCEEEEECHHHHHTTCSSCGGGSCC
T ss_pred             HHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcEE---EEecccc-cCccCcEEEEECHHHHHHHhcccccccce
Confidence            6666665 9999999999988654432  22223334433   6899987 57 7999999999999887542       


Q ss_pred             -cCCCCCcHHHHHHHHHHcc---CChHHH-HHH---HHHH-HHHHHHHHHccCCCCcccCCCceEEEEEeCCC-------
Q 014594          309 -KQPYNVSVAAEVAACAALQ---NPIYLE-VKE---ALIK-ERERLFKLLKDVPFLNPYPSYSNFILCEVTSG-------  372 (422)
Q Consensus       309 -~~~~~~~~~~~~aa~~~L~---~~~~~~-~~~---~~~~-~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~-------  372 (422)
                       ..+|+.++++++++.++|+   ++++.+ +.+   ++++ .++.+.+.+++.+.+......|.++.+++...       
T Consensus       697 hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~  776 (831)
T 4a0g_A          697 HGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVVIGTLFALELKADASNSGYA  776 (831)
T ss_dssp             CCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEEETTEEEEEEC---------
T ss_pred             eecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEeecccEEEEEEecCccccccc
Confidence             2347789999988888875   233322 111   1111 12234555666665554556778888887421       


Q ss_pred             -CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          373 -MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       373 -~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                       ..+.++.+.|+++||++++..     +.+||+..   +.++++++.++++
T Consensus       777 ~~~a~~~~~~l~e~Gv~v~p~g-----~~lrl~pp~~~t~e~id~~~~~l~  822 (831)
T 4a0g_A          777 SLYAKSLLIMLREDGIFTRPLG-----NVIYLMCGPCTSPEICRRLLTKLY  822 (831)
T ss_dssp             CHHHHHHHHHHHHTTEECCCBT-----TEEEEECCTTCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHCCcEEEecC-----CEEEEECCCCCCHHHHHHHHHHHH
Confidence             124568888999999999764     79999854   3444444444443

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=99.50  E-value=9.3e-12  Score=121.51  Aligned_cols=220  Identities=12%  Similarity=-0.040  Sum_probs=142.3

Q ss_pred             HHHHHHHHHcCCCCC-CEEEeCCHHHHHHHHHHHhcCC----CCEEEEcCCCchhHHHHHHHcCCEEEEecC---CCCCC
Q 014594          133 RLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDP----GDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFS  204 (422)
Q Consensus       133 ~lr~~la~~~~~~~~-~i~~~~G~~~al~~~~~~l~~~----gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~  204 (422)
                      .+...+.+.+|++.. ..++++|+|.+...++.+.+++    ++.|+++..+|......+...|+.++.++.   ++.+.
T Consensus       102 ~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~~~~~~~~  181 (450)
T 3bc8_A          102 SLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDELR  181 (450)
T ss_dssp             HHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEE
T ss_pred             HHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEeeecCccCC
Confidence            556666666788544 4588888884444444434443    799999999999999999999999998874   45678


Q ss_pred             CCHHHHHHHhhcCC--CeEEEEeCCC-CccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCC-chh-hhhhcCCcEEEE
Q 014594          205 LNVELIADAVEREK--PKCIFLTSPN-NPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE-SRM-EWVKKHDNLIVL  278 (422)
Q Consensus       205 ~d~~~l~~~i~~~~--~~~i~l~~p~-NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~-~~~-~~~~~~~~~i~~  278 (422)
                      +|++.|++++++.+  .+++++.+|+ +.+|.+-+.+++.+||+. |+++++|+||....... ... ..+....-+.++
T Consensus       182 id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~~AD~~v  261 (450)
T 3bc8_A          182 TDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFV  261 (450)
T ss_dssp             CCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhcccCCCEEE
Confidence            99999999997532  4555555554 556789999999999998 99999999998543211 111 111112345788


Q ss_pred             ccChhhhccccccceeeec-CHHHHHHHHHhcCCCCCcHHHHHHHHHHccC--ChHHHHHHHHHHHHHHHHHHHccCC
Q 014594          279 RTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQN--PIYLEVKEALIKERERLFKLLKDVP  353 (422)
Q Consensus       279 ~S~SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~--~~~~~~~~~~~~~~~~l~~~L~~~~  353 (422)
                      .|.+|.+. .....+++.. +++.++++.........+.++.......+..  ..+.+..++..+..+++.+.|++++
T Consensus       262 ~S~HK~l~-a~~~~~~l~~rd~~~~~~~~~~~~g~~s~SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~  338 (450)
T 3bc8_A          262 QSLDKNFM-VPVGGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLA  338 (450)
T ss_dssp             EEHHHHHS-CCSSCEEEEESCHHHHHHHHHHSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ECCccCCC-chhccEEEEecCHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence            89999764 4444666665 6777776655432112222233222222222  1222254555666777777776654

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=99.37  E-value=5e-12  Score=122.07  Aligned_cols=243  Identities=12%  Similarity=-0.010  Sum_probs=155.7

Q ss_pred             CCCC-CCEEEeCCHHHHHHHHHHHhcCC----CCEEEEcCCCchhHHHHHHHcCCEEEEecC---CCCCCCCHHHHHHHh
Q 014594          143 GLES-DHILVGCGADELIDLIMRCVLDP----GDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADAV  214 (422)
Q Consensus       143 ~~~~-~~i~~~~G~~~al~~~~~~l~~~----gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~~d~~~l~~~i  214 (422)
                      |++. ...++++|+|.++..++.+.+++    +|+|+++..+|..........|++++.++.   ++..++|++.+++++
T Consensus       130 G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI  209 (501)
T 3hl2_A          130 GVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKV  209 (501)
T ss_dssp             TCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEEECHHHHHHHH
T ss_pred             CCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccccCCCHHHHHHHH
Confidence            7754 46899999997776666666664    499999999999999999999999999984   445789999999999


Q ss_pred             hcCC--CeEEEEe-CCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCCchh-hhhhcCCcEEEEccChhhhccc
Q 014594          215 EREK--PKCIFLT-SPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRM-EWVKKHDNLIVLRTFSKRAGLA  288 (422)
Q Consensus       215 ~~~~--~~~i~l~-~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~~~~-~~~~~~~~~i~~~S~SK~~~~~  288 (422)
                      ++.+  ..++++. .+.|-.|.+-+.+++.+||+. |+++++|+||.... +..... ..+.....++++.|..|.+-++
T Consensus       210 ~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvp  289 (501)
T 3hl2_A          210 QELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVP  289 (501)
T ss_dssp             HHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCC
T ss_pred             HhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEecccccceee
Confidence            7532  3344434 445545677899999999988 99999999998543 111111 1121122568899999987544


Q ss_pred             cccceeeec-CHHHHHHHHHhcCCCCCcHH---HHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCC---CcccCCC
Q 014594          289 GLRVGYGAF-PLSIIEYLWRAKQPYNVSVA---AEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPF---LNPYPSY  361 (422)
Q Consensus       289 G~r~G~i~~-~~~~~~~l~~~~~~~~~~~~---~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~p~~  361 (422)
                       +..|.+.. ++++++++.... +...+..   ...++...+....|.++.++..++.+++.+.|+++..   ..+....
T Consensus       290 -IGG~ii~~~d~e~l~~~~~~y-PGr~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~  367 (501)
T 3hl2_A          290 -VGGAIIAGFNDSFIQEISKMY-PGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTP  367 (501)
T ss_dssp             -SSCEEEEESCHHHHHHHHHTS-CSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCT
T ss_pred             -cCceEEEeCCHHHHHHHHHhC-CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCC
Confidence             23334433 677888774432 3322222   2333333333345544777778888888888877421   2333333


Q ss_pred             ce--EEEEEeCC-----CCCHHHHHHHHHhCCc
Q 014594          362 SN--FILCEVTS-----GMDAKKLKDDLAKMGV  387 (422)
Q Consensus       362 ~~--f~~~~~~~-----~~~~~~~~~~L~~~gI  387 (422)
                      .|  -+.+.+..     +.+...+-..|-.++|
T Consensus       368 ~n~is~a~tl~~~~~~~~~~~t~~gs~Lf~r~v  400 (501)
T 3hl2_A          368 HNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQV  400 (501)
T ss_dssp             TCSSEEEEECTTSCTTTSCHHHHHHHHHHHTTC
T ss_pred             CCceeEEEecccccccccccHHHHHHHHHhcCC
Confidence            33  34455531     1224566666665543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	422
d2hoxa1	425	c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativ	9e-42
d1b5pa_	382	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	5e-41
d1fg7a_	354	c.67.1.1 (A:) Histidinol-phosphate aminotransferas	3e-40
d1gdea_	388	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	4e-38
d1j32a_	388	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pho	8e-37
d1lc5a_	355	c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxyl	2e-34
d2f8ja1	334	c.67.1.1 (A:1-334) Histidinol-phosphate aminotrans	4e-25
d1o4sa_	375	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	1e-23
d1xi9a_	395	c.67.1.1 (A:) Putative alanine aminotransferase {P	1e-22
d1v2da_	368	c.67.1.1 (A:) Glutamine aminotransferase {Thermus	3e-18
d2gb3a1	389	c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotog	2e-14
d1m7ya_	431	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	1e-13
d1iaya_	428	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	3e-13
d1svva_	340	c.67.1.1 (A:) Low-specificity threonine aldolase {	5e-13
d1wsta1	403	c.67.1.1 (A:13-415) Multiple substrate aminotransf	2e-12
d1ajsa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig	2e-11
d1yaaa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Bak	2e-10
d2ay1a_	394	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	4e-10
d1m6sa_	343	c.67.1.1 (A:) Low-specificity threonine aldolase {	8e-10
d2q7wa1	396	c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT	4e-09
d1u08a_	382	c.67.1.1 (A:) Putative methionine aminotransferase	9e-09
d1w7la_	418	c.67.1.1 (A:) Kynurenine--oxoglutarate transaminas	2e-08
d1d2fa_	361	c.67.1.3 (A:) Modulator in mal gene expression, Ma	1e-07
d1v72a1	345	c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Ps	1e-06
d1c7na_	394	c.67.1.3 (A:) Cystalysin {Treponema denticola [Tax	0.001
d1vp4a_	420	c.67.1.1 (A:) Putative aminotransferase TM1131 {Th	0.002
d1bw0a_	412	c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Try	0.002
d2r5ea1	418	c.67.1.1 (A:12-429) Kynurenine--oxoglutarate trans	0.003

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]} Length = 425

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

 Score =  150 bits (380), Expect = 9e-42
 Identities = 51/345 (14%), Positives = 96/345 (27%), Gaps = 66/345 (19%)

Query: 123 PYIYPD---PESRRLRAALAKDSGL------ESDHILVGCGADELIDLIMR--------C 165
            Y +       S  L   + +   +      +  +I+ G G  +LI  ++          
Sbjct: 91  SYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTAT 150

Query: 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT 225
              P  K+V   P + ++                   ++ N     +     +     +T
Sbjct: 151 PDAPESKVVAHAPFYPVFREQTKYFDKKGY------VWAGNAANYVNVSN-PEQYIEMVT 203

Query: 226 SPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA 285
           SPNNP+G + +           ++      Y              K D  I+L T SK  
Sbjct: 204 SPNNPEGLLRHA----------VIKGCKSIYDMVYYWPHYTPIKYKADEDILLFTMSKFT 253

Query: 286 GLAGLRVGYGAFPLSIIEYLWRAKQPYN---VSVAAEVAACAALQNP------------- 329
           G +G R G+       +          N        ++ +   L+               
Sbjct: 254 GHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRD 313

Query: 330 IYLEVKEALIKERERLFKLLKDVPFLN----PYPSYSNFILCEVTSGM----------DA 375
           +     + L +    +  LL      +    P   Y N+                   + 
Sbjct: 314 LNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEED 373

Query: 376 KKLKDDLAKMGVMIRHYNNKEL-KGYVRVSVGKP-EHTDALMECL 418
           K          +  ++    E    YVR+S+ K  +  D LM  L
Sbjct: 374 KDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQDDFDQLMYYL 418

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

 Score =  147 bits (372), Expect = 5e-41
 Identities = 71/371 (19%), Positives = 139/371 (37%), Gaps = 26/371 (7%)

Query: 65  SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFP 123
             +   ++ +KP    +     +++L R+  D+V + A E  +  P  V+EA  + L   
Sbjct: 2   RGLSRRVQAMKPS-ATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60

Query: 124 YI-YPDPE-SRRLRAALAKDS------GLESDHILVGCGADELIDLIMRCVLDPGDKIVD 175
              Y  P     LR ALA+         +  +  +V  G  + +  + + +LDPGD+++ 
Sbjct: 61  KTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIV 120

Query: 176 CPPTFTMYEFDAAVNGAAVVKVPRKSDF--SLNVELIADAVEREKPKCIFLTSPNNPDGS 233
             P +  Y       G  VV+V    +     + E +  A+   + K + + SPNNP G+
Sbjct: 121 LSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAI-TPRTKALVVNSPNNPTGA 179

Query: 234 IINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKK-HDNLIVLRTFSKRAGLA 288
           +   E L  +  +       +V DE Y             +   ++ + +   +K   + 
Sbjct: 180 VYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMT 239

Query: 289 GLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERL--- 345
           G R+GY   P  +I+ +    +    S                   +  +   RE     
Sbjct: 240 GWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRR 299

Query: 346 ----FKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRHYNNKELKGY 400
                + L  +      PS + ++L + +    D  +  + L + GV +    +    G+
Sbjct: 300 RDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFGH 359

Query: 401 VRVSVGKPEHT 411
           VR+S    E  
Sbjct: 360 VRLSYATSEEN 370

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]} Length = 354

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

 Score =  144 bits (364), Expect = 3e-40
 Identities = 100/366 (27%), Positives = 168/366 (45%), Gaps = 32/366 (8%)

Query: 64  DSFIRSHLRKLKPYQPILPFEVLSIQLGRKP--EDIVKIDANENPYGPPPEVREALGQLK 121
               R ++R L PYQ             R+      V ++ANE P     ++ +      
Sbjct: 5   TDLARENVRNLTPYQS-----------ARRLGGNGDVWLNANEYPTAVEFQLTQQTLNR- 52

Query: 122 FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181
               YP+ + + +    A+ +G++ + +LV  GADE I+L++R   +PG   +   P   
Sbjct: 53  ----YPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTY 108

Query: 182 MY-EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE-- 238
                 A   G     VP   ++ L+++ I+D  + +  K +++ SPNNP G +IN +  
Sbjct: 109 GMYSVSAETIGVECRTVPTLDNWQLDLQGISD--KLDGVKVVYVCSPNNPTGQLINPQDF 166

Query: 239 -DLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297
             LL++     +VV DEAY EF    S   W+ ++ +L +LRT SK   LAGLR G+   
Sbjct: 167 RTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA 226

Query: 298 PLSIIEYLWRAKQPYNVSVAAEVAACAALQN---PIYLEVKEALIKERERLFKLLKDVPF 354
              +I  L +   PY +S      A  AL         E    +I ERE L   LK++P 
Sbjct: 227 NEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPC 286

Query: 355 LNP-YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVGKPEHTD 412
           +   + S +N+IL        +  +   L   G+++R  N +  L G +R++VG  E + 
Sbjct: 287 VEQVFDSETNYILARFK---ASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVGTREESQ 343

Query: 413 ALMECL 418
            +++ L
Sbjct: 344 RVIDAL 349

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score =  139 bits (352), Expect = 4e-38
 Identities = 78/355 (21%), Positives = 147/355 (41%), Gaps = 37/355 (10%)

Query: 90  LGRKPEDIVKIDANENPYGPPPEVREAL------GQLKFPYIYPDPESRRLRAALAK--- 140
           +    +D++ +   E  +  P  ++E        G   +       E   LR A+A+   
Sbjct: 20  IAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLE---LREAIAEKLK 76

Query: 141 ----DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK 196
                       I+V  GA++   + +   L  G++++   P F  Y     + G   V+
Sbjct: 77  KQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVE 136

Query: 197 VPRKSD--FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILV 250
           VP   +  F LNV+ +   V  +K + + + SP NP G+++  +DL +I +      ++V
Sbjct: 137 VPTYEEDEFRLNVDELKKYV-TDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIV 195

Query: 251 VLDEAYTEFSGLESRMEWVKK----HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL- 305
           + DE Y  F   ++R   +       +  I +  FSK   + G R+G+ A P  IIE + 
Sbjct: 196 ISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMV 255

Query: 306 -WRAKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERL----FKLLKDVPFLNPYPS 360
            ++           + AA  AL++    +  E + KE +R     +K L ++      P 
Sbjct: 256 KFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPK 315

Query: 361 YSNFILCEVT-SGMDAKKLKDDLAK-MGVMIRH--YNNKELKGYVRVSVGKPEHT 411
            + +I   +  +G+ +KK  + + K   V +       K  +GYVR+S       
Sbjct: 316 GAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEK 370

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

 Score =  136 bits (343), Expect = 8e-37
 Identities = 74/371 (19%), Positives = 148/371 (39%), Gaps = 35/371 (9%)

Query: 71  LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREAL------GQLKFPY 124
           +  + P    L  +  +  +  +  D+    A E  +  P  + EA       G+ ++  
Sbjct: 7   VESVSPS-MTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGP 65

Query: 125 IYPDPESRRLRAALAKDSG------LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
              +P    LR A+A+           +D+ILV  G  + I  +M  +++PGD+++   P
Sbjct: 66  AAGEPR---LREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAP 122

Query: 179 TFTMYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236
            +  Y     +     V +P   +  F ++ E I  A+   K K +   +P+NP G +  
Sbjct: 123 FWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAI-TPKTKLLVFNTPSNPTGMVYT 181

Query: 237 DEDLLKIL----EMPILVVLDEAYTEFSGLESRMEWVKK-----HDNLIVLRTFSKRAGL 287
            +++  I     E  + V+ DE Y +    +++   +       ++  +V   F+K   +
Sbjct: 182 PDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAM 241

Query: 288 AGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNP--IYLEVKEALIKERE 343
            G RVG+ A P+ +++   + +     NV   A+  A AA +N      E+  A  + R 
Sbjct: 242 TGWRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRR 301

Query: 344 RLFKLLKDVPFLN-PYPSYSNFILCEVT-SGMDAKKLKDDLA-KMGVMIRHYNNKELKGY 400
            +   L  +P L  P P  + ++   +  +G  +     +L  +  V             
Sbjct: 302 YMLDALNAMPGLECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDC 361

Query: 401 VRVSVGKPEHT 411
           +R+S      T
Sbjct: 362 IRLSYATDLDT 372

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]} Length = 355

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

 Score =  129 bits (324), Expect = 2e-34
 Identities = 77/340 (22%), Positives = 129/340 (37%), Gaps = 14/340 (4%)

Query: 89  QLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESD 147
            LG  P+ ++   AN NP G P  V+ AL   L     YPD +   L  ALA+   + + 
Sbjct: 16  VLGISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDADYFHLHQALARHHQVPAS 75

Query: 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV 207
            IL G G  E I  +   +     + +   P F  Y    A +G  + +   +      +
Sbjct: 76  WILAGNGETESIFTVASGLKPR--RAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL 133

Query: 208 ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE-----MPILVVLDEAYTEFSGL 262
                        C+FL +PNNP G +     L  I +        L++ +         
Sbjct: 134 TDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHE 193

Query: 263 ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEV 320
              +  +K + ++ VLR+ +K   + GLR+GY            R +Q      ++AA  
Sbjct: 194 TGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMPWSVNALAALA 253

Query: 321 AACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD 380
              A   +         L +E  R ++ L  +P L  YP  +N++L       +   L+ 
Sbjct: 254 GEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVYPGRANYLLLRC--EREDIDLQR 311

Query: 381 DLAKMGVMIRHYNN--KELKGYVRVSVGKPEHTDALMECL 418
            L    ++IR   N       Y RV++      + L+  L
Sbjct: 312 RLLTQRILIRSCANYPGLDSRYYRVAIRSAAQNERLLAAL 351

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]} Length = 334

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

 Score =  102 bits (255), Expect = 4e-25
 Identities = 99/356 (27%), Positives = 164/356 (46%), Gaps = 40/356 (11%)

Query: 71  LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQLKFPYIY 126
            ++  PY+              +  D   +  NENP+  P ++ +     L        Y
Sbjct: 8   AKRAYPYET-------------EKRDKTYLALNENPFPFPEDLVDEVFRRLNSDALRI-Y 53

Query: 127 PDPESRRLRAALAK---DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY 183
            D     L   +        L  +++ VG GADE+I ++M       D+ V  PPT++ Y
Sbjct: 54  YDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF----DRSVFFPPTYSCY 109

Query: 184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243
              A   GA  ++VP   D  +            +   +F+ +PNNP G +   E++ +I
Sbjct: 110 RIFAKAVGAKFLEVPLTKDLRIPEV------NVGEGDVVFIPNPNNPTGHVFEREEIERI 163

Query: 244 LEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
           L+    V LDEAY EF G ES ++++KK++NL V+RTFSK   LA  RVGY       I+
Sbjct: 164 LKTGAFVALDEAYYEFHG-ESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFID 222

Query: 304 YLWRAKQPYNVS-VAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYS 362
              R + P+NVS V+   A  A     I+ E  + +++ERER+   L+++ +     S  
Sbjct: 223 AYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMGY-RITDSRG 281

Query: 363 NFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 418
           NF+   +    + ++L + L    V +R +        VR+++GK E  D ++  L
Sbjct: 282 NFVFVFM-EKEEKERLLEHLRTKNVAVRSFRE-----GVRITIGKREENDMILREL 331

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]} Length = 375

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

 Score = 99.3 bits (246), Expect = 1e-23
 Identities = 65/363 (17%), Positives = 124/363 (34%), Gaps = 20/363 (5%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL--KFPY 124
           +   + ++      +  +  +  L +K ED++ + A E  +  P  V E   +   K   
Sbjct: 1   VSRRISEIPIS-KTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEV 59

Query: 125 IYPDPE-SRRLRAALAKD------SGLESDHILVGCGADELIDLIMRCVLDPGDK-IVDC 176
            Y DP     LR  +AK         +  D ++V  GA + +      +LDPGD+ IV  
Sbjct: 60  KYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFS 119

Query: 177 PPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236
           P   +         G   V     S          + +   K K + + SPNNP G +  
Sbjct: 120 PVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYR 179

Query: 237 DEDLLKILEM---PILVVLDEAYTEFSGLESRMEWV----KKHDNLIVLRTFSKRAGLAG 289
            E L  ++ +       ++ +   +          +    +  D ++ +  FSK   + G
Sbjct: 180 REFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTG 239

Query: 290 LRVGYGAFPLSIIEY-LWRAKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKL 348
            RVGY      +            +        A           + +   + +  + + 
Sbjct: 240 WRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKERKNFVVER 299

Query: 349 LKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKP 408
           LK +      P  + ++  +V  G D K  +  L +  V +   +     G+VR+S    
Sbjct: 300 LKKMGVKFVEPEGAFYLFFKV-RGDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATS 358

Query: 409 EHT 411
              
Sbjct: 359 IER 361

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]} Length = 395

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

 Score = 96.6 bits (239), Expect = 1e-22
 Identities = 80/360 (22%), Positives = 143/360 (39%), Gaps = 40/360 (11%)

Query: 89  QLGRKPEDIVKI---DANENPYGPPPEVREAL------GQLKFPYIYPDPESRRLRAALA 139
           +L +K   ++++   D  +  + PP  ++EA       G   +      PE   LR A+ 
Sbjct: 24  ELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPE---LRKAIV 80

Query: 140 KDSGLE------SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA 193
           +    +       D + V     E + LI   +LDPGD+I+   P++  Y       G  
Sbjct: 81  EREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGK 140

Query: 194 VVKVP-RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL----EMPI 248
            V+    + +              ++ K I + +PNNP G++ + + L +IL    E  I
Sbjct: 141 PVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEI 200

Query: 249 LVVLDEAYTEFSGLESRMEWVK--KHDNLIVLRTFSKRAGLAGLRVGYGAFP-----LSI 301
            V+ DE Y   +     +      K   +IV+   SK     G R+GY  F      LS 
Sbjct: 201 PVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSE 260

Query: 302 IEYLWR--AKQPYNVSVAAEVAACAALQNPI--YLEVKEALIKERERLFKLLKDVPFLNP 357
           +       A+     +  A+ AA A L  P+    E  + L + R+ ++K L ++P ++ 
Sbjct: 261 VREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGIST 320

Query: 358 Y-PSYSNFILCEVTSGM---DAKKLKDDLAKMGVMIRHYN--NKELKGYVRVSVGKPEHT 411
             P  + +I  ++  G    D + + D L    V+  H +   +   G+ R     P   
Sbjct: 321 TKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEI 380

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]} Length = 368

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

 Score = 83.2 bits (204), Expect = 3e-18
 Identities = 73/360 (20%), Positives = 138/360 (38%), Gaps = 29/360 (8%)

Query: 71  LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP 129
               K       F  +S  L ++    V +        PPP + EA+ + L     Y  P
Sbjct: 7   TEAAKES----IFPRMS-GLAQRL-GAVNLGQGFPSNPPPPFLLEAVRRALGRQDQYAPP 60

Query: 130 E-SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA 188
                LR ALA++  +E + ++V  GA E + ++++ ++ PGD++V   P F +Y  DA 
Sbjct: 61  AGLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAF 120

Query: 189 VNG--AAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246
           + G  A +V++    +         +     + + + L +P NP G +  + +L  I  +
Sbjct: 121 LAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARL 180

Query: 247 ---PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301
                L ++ +   +      R         +    + +  KR    G RVG+   P   
Sbjct: 181 ARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEF 240

Query: 302 IEYLWRAKQPYNVSVAAEVA------ACAALQNPIYLEVKEALIKERERLFKLLKDVPFL 355
           +  L   +Q  + S    +          A +   Y  ++E   + R+ L   L+ +   
Sbjct: 241 MPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLR 300

Query: 356 NPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRH----YNNKELKGYVRVSVGKPEHT 411
              P  + F++ E+  G DA +L   + +  V +      Y     K   R +  K E  
Sbjct: 301 VYVPEGTYFLMAEL-PGWDAFRL---VEEARVALIPASAFYLEDPPKDLFRFAFCKTEEE 356

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]} Length = 389

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

 Score = 71.8 bits (174), Expect = 2e-14
 Identities = 64/383 (16%), Positives = 131/383 (34%), Gaps = 34/383 (8%)

Query: 69  SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYP 127
             +   +   PI      +    ++   I  ++  +     P    E + +       Y 
Sbjct: 3   DRVLLTEES-PIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERIYENKPEVVYYS 61

Query: 128 DPE-SRRLRAALAK------DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180
                  LR A A          ++ +++LV  G  E I      + +PGD+I+   P +
Sbjct: 62  HSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFY 121

Query: 181 TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240
             Y   A + G  ++ V R+ +    +    ++   E+ K I L++P NP G +   +++
Sbjct: 122 ANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFINERTKGIVLSNPCNPTGVVYGKDEM 181

Query: 241 LKILE----MPILVVLDEAYTEFSGLESRMEWVKKHDNLIV-LRTFSKRAGLAGLRVGYG 295
             ++E      + +++DE Y+E          +    + +V + + SK+    G RVG  
Sbjct: 182 RYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCL 241

Query: 296 AFPLS-----IIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLK 350
                      ++       P  +     V       +      +    +    L KL +
Sbjct: 242 ITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEE 301

Query: 351 DVPFLNPYPSYSNFILCEVTSGMD---AKKLKDD--LAKMGVMIR-----HYNNKELKGY 400
                   PS + +I  E+        A+ +  D  +     M+      +      K  
Sbjct: 302 HGLKRFTKPSGAFYITAELPVEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKE 361

Query: 401 VRVSVGKPEHT-----DALMECL 418
           +R++    +       D LME L
Sbjct: 362 IRIACVLEKDLLSRAIDVLMEGL 384

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]} Length = 431

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

 Score = 70.0 bits (170), Expect = 1e-13
 Identities = 39/383 (10%), Positives = 102/383 (26%), Gaps = 62/383 (16%)

Query: 92  RKPEDIVKIDANENPY-----------GPPPEVREALGQLKFPYI--YPDPE-SRRLRAA 137
                I+++   EN              P     +  G+  F  +  + D       + A
Sbjct: 33  HNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKA 92

Query: 138 LAK--------DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV 189
           +              + +H+++  GA    +  + C+ DPG+ ++   P +  ++ D   
Sbjct: 93  MVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKW 152

Query: 190 NGAAVVKVPRKSDFSLNVELIAD------AVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243
                +     +  +                E+   +   +   N  +            
Sbjct: 153 RTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELY 212

Query: 244 LEMPILVVLDEAYTEFSGLESRMEWVKKH-------------------DNLIVLRTFSKR 284
           L +  +                                            + V+ + SK 
Sbjct: 213 LLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKD 272

Query: 285 AGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVA------AEVAACAALQNPIYLEVKEAL 338
            GL G RVG       ++         + +  +      + + +   L      E  + L
Sbjct: 273 LGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRL 332

Query: 339 IKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDD-------LAKMGVMIRH 391
            + +++L   L+         +   F   ++   + +   + +       + ++ + I  
Sbjct: 333 KQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISP 392

Query: 392 YN--NKELKGYVRVSVGKPEHTD 412
            +  +    G+ RV         
Sbjct: 393 GSSCHCTEPGWFRVCFANLPERT 415

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 428

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

 Score = 68.5 bits (166), Expect = 3e-13
 Identities = 57/373 (15%), Positives = 111/373 (29%), Gaps = 53/373 (14%)

Query: 88  IQLG----RKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPE-SRRLRAALAK-- 140
           IQ+G    +   D+++     NP        E +   K    + D       R A+AK  
Sbjct: 39  IQMGLAENQLCLDLIEDWIKRNP--KGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFM 96

Query: 141 ------DSGLESDHILVGCGADELIDLIMRCVLDPGDK-IVDCPPTFTMYEFDAAVNGAA 193
                     + + +++  GA    + I+ C+ DPGD  +V  P             G  
Sbjct: 97  EKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQ 156

Query: 194 VVKVPRKSDFSLNVELIAD-------AVEREKPKCIFLTSPNN----PDGSIINDEDLLK 242
           ++ +  +S  +  +   A             K K + LT+P+N              L  
Sbjct: 157 LIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSF 216

Query: 243 ILEMPILVVLDEAYTEFSGLESRMEWVK-----------KHDNLIVLRTFSKRAGLAGLR 291
             +  I +V DE Y        +   +              D + ++ + SK  GL G R
Sbjct: 217 TNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFR 276

Query: 292 VGYGAFPLSIIEYLWRAKQPYNVSVAAEV------AACAALQNPIYLEVKEALIKERERL 345
           VG        +    R    + +             +     +    E    L K  +  
Sbjct: 277 VGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHF 336

Query: 346 FKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDD-------LAKMGVMIRHYN--NKE 396
              L+ V       +   F   ++   +       +       +  + + +   +    +
Sbjct: 337 TNGLEVVGIKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQ 396

Query: 397 LKGYVRVSVGKPE 409
             G+ RV     +
Sbjct: 397 EPGWFRVCFANMD 409

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]} Length = 340

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

 Score = 67.6 bits (163), Expect = 5e-13
 Identities = 33/338 (9%), Positives = 85/338 (25%), Gaps = 26/338 (7%)

Query: 102 ANENPYGPPPEVREALGQ--LKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADEL 158
            N+   G  P++ + + +  +     Y  D    +    + +        +    G  + 
Sbjct: 5   VNDYSVGMHPKILDLMARDNMTQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQT 64

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREK 218
             +     L P + ++             A+       V              ++   E 
Sbjct: 65  NLIACSLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCPDGKLRVADIESALHEN 124

Query: 219 PKCIFLTSPNNPDGSIIN----------DEDLLKILEMPILVVLDEAYTE---FSGLESR 265
                +        +             ++      E  + + LD A       S +   
Sbjct: 125 RSEHMVIPKLVYISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDL 184

Query: 266 MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA--FPLSIIEYLWRAKQPYNVSVAAEVAAC 323
                     +     +K  G+ G  +         +    + +            +   
Sbjct: 185 TLADIARLTDMFYIGATKAGGMFGEALIILNDALKPNARHLIKQRGALMAKGWLLGIQFE 244

Query: 324 AALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA 383
             +++ ++ E+     K    L   L+       +PS SN +   +       +L +D  
Sbjct: 245 VLMKDNLFFELGAHSNKMAAILKAGLEACGIRLAWPSASNQLFPIL-ENTMIAELNNDFD 303

Query: 384 KMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECL 418
              V        +    +R+      + +     +E L
Sbjct: 304 MYTVEPLK----DGTCIMRLCTSWATEEKECHRFVEVL 337

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]} Length = 403

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

 Score = 65.8 bits (159), Expect = 2e-12
 Identities = 57/337 (16%), Positives = 112/337 (33%), Gaps = 36/337 (10%)

Query: 109 PPPEVREALGQL-----KFPYIYPDPE-SRRLRAALAK------DSGLESDHILVGCGAD 156
           P   +++   ++          Y   +    LR ALA+      D  +    I+   G+ 
Sbjct: 45  PVETIKKIAVEVLEEHADKALQYGTTKGFTPLRLALARWMEKRYDIPMSKVEIMTVAGSQ 104

Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD-----FSLNVELIA 211
           + +DLI R  L+PGD IV   PT+              + +P                  
Sbjct: 105 QALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIPLDDKGMRVDLLEEKLEEL 164

Query: 212 DAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAYTE--FSGLESR 265
               +       +++  NP G  ++ +   K+L    E   L+V D  Y+E  +SG  + 
Sbjct: 165 RKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTP 224

Query: 266 MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN-----VSVAAEV 320
                     ++      +    G R+G+ A    +I  +  AKQ  +        A   
Sbjct: 225 PIKHFDDYGRVIYLGTFSKILAPGFRIGWVAAHPHLIRKMEIAKQSIDLCTNTFGQAIAW 284

Query: 321 AACAALQNPIYLEVK-EALIKERERLFKLLKDVPFLN---PYPSYSNFILCEVTSGMDAK 376
                     ++    E     R+ + + L++          P    F+   +  G+D K
Sbjct: 285 KYVENGYLDEHIPKIIEFYKPRRDAMLEALEEYMPEGVEWTKPEGGMFVRVTLPEGIDTK 344

Query: 377 KLKDDLAKMGVMIR----HYNNKELKGYVRVSVGKPE 409
            + +     GV        + +++ K  +R++     
Sbjct: 345 LMMERAVAKGVAYVPGEAFFVHRDKKNTMRLNFTYVP 381

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

 Score = 63.1 bits (152), Expect = 2e-11
 Identities = 43/306 (14%), Positives = 80/306 (26%), Gaps = 35/306 (11%)

Query: 97  IVKIDANENPYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGC 153
           I    +  + Y P     E R    +L      P  + +R+    +              
Sbjct: 60  IANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQS------LGGTGALR 113

Query: 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADA 213
              E +        +    +    PT+  +       G   ++  R  D       +   
Sbjct: 114 IGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGF 173

Query: 214 VEREK-----PKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFS--GL 262
           +   +        +     +NP G+    E   +I  +     +    D AY  F+   L
Sbjct: 174 LSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNL 233

Query: 263 E----SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA 318
           E    +   +V +   L   ++FSK  GL   RVG         + + R        V  
Sbjct: 234 EKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRV 293

Query: 319 EV---------AACAALQNPIYLEVKEALIKERERLFKLLKD--VPFLNPYPSYSNFILC 367
                           L +P         +K        ++      L    +   +   
Sbjct: 294 TWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHI 353

Query: 368 EVTSGM 373
               GM
Sbjct: 354 TDQIGM 359

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

 Score = 60.0 bits (144), Expect = 2e-10
 Identities = 48/259 (18%), Positives = 80/259 (30%), Gaps = 39/259 (15%)

Query: 99  KID----ANENPYGPPPE---VREALGQL----KFPYIYPDPE-SRRLRAALAK------ 140
           K+D    A  +  G P     V+ A   +     + + Y        L +  AK      
Sbjct: 31  KVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQ 90

Query: 141 -DSGLESDHILV---GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK 196
            D+  E   I V          I         P   +    PT+  +       G     
Sbjct: 91  SDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTAT 150

Query: 197 VPRKS----DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PI 248
            P  +       LN  L A     E    +  +  +NP G     E  ++I++       
Sbjct: 151 YPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNH 210

Query: 249 LVVLDEAYTEFS---------GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           + + D AY  F+          +   +E +     + V ++F+K AG+ G RVG     L
Sbjct: 211 IALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLAL 270

Query: 300 SIIEYLWRAKQPYNVSVAA 318
           +        K      +A 
Sbjct: 271 TKQAQNKTIKPAVTSQLAK 289

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

 Score = 58.9 bits (141), Expect = 4e-10
 Identities = 32/236 (13%), Positives = 68/236 (28%), Gaps = 25/236 (10%)

Query: 101 DANENPYGPPPEVREALGQL---KFPYIYPDPE-SRRLRAALAK-------DSGLESDHI 149
           DA  +       V  A  ++   +    Y         + A+ +        S   +   
Sbjct: 38  DATGHTP-IMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDGLKSETTATLA 96

Query: 150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE- 208
            VG        L +  + +P  ++    PT+  +       G  V         +  V+ 
Sbjct: 97  TVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDF 156

Query: 209 ---LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAYTEFSG 261
                  A  ++    +     +NP G+ +  +   +I     +   L ++D AY  F  
Sbjct: 157 EGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGD 216

Query: 262 LE-----SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY 312
                         +   +++  + SK  G+   R G      +       A+   
Sbjct: 217 GLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAM 272

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]} Length = 343

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

 Score = 57.5 bits (137), Expect = 8e-10
 Identities = 47/330 (14%), Positives = 94/330 (28%), Gaps = 24/330 (7%)

Query: 108 GPPPEVREALGQLKF--PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165
            P  E+R+A+ Q +        DP    L    A+  G E   + V  G       IM  
Sbjct: 11  KPTEEMRKAMAQAEVGDDVYGEDPTINELERLAAETFGKE-AALFVPSGTMGNQVSIMAH 69

Query: 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN------VELIADAVEREKP 219
                + I++       YE  A    + V+  P                +    +   + 
Sbjct: 70  TQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFPRT 129

Query: 220 KCIFLTSPNNPDGSII-NDEDLLKILEMP-----ILVVLDEAYTEFSGLESRMEWVKKHD 273
             I + + +N  G  +   E++ +I  +       + +        S             
Sbjct: 130 SLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGY 189

Query: 274 NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
              V+   SK        V  G           R      +  A  +AA   +     ++
Sbjct: 190 ADSVMFCLSKGLCAPVGSVVVGDRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMVD 249

Query: 334 VKEALIKERERLFKLLKDVPFL-NPYPSYSNFILCEVT-SGMDAKKLKDDLAKMGVMIRH 391
             +   +    L   LK++ +  NP    +N ++       ++A    + L   GV+   
Sbjct: 250 RLKEDHENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLKVNAHGFIEALRNSGVLANA 309

Query: 392 YNNKELKGYVRVSVG---KPEHTDALMECL 418
            +       +R+           +  +   
Sbjct: 310 VS----DTEIRLVTHKDVSRNDIEEALNIF 335

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]} Length = 396

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

 Score = 55.8 bits (133), Expect = 4e-09
 Identities = 46/311 (14%), Positives = 84/311 (27%), Gaps = 39/311 (12%)

Query: 101 DANENPYGPPPEVREALGQL---KFPYIYPDPE-SRRLRAALAK----------DSGLES 146
           D           V++A   L   +    Y   +          +          +     
Sbjct: 38  DETGKTP-VLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRAR 96

Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN 206
                G      +            ++    P++  ++      G  V +       +  
Sbjct: 97  TAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156

Query: 207 VELIADAVERE----KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTE 258
           ++  A              +F    +NP G     E    + ++      L + D AY  
Sbjct: 157 LDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQG 216

Query: 259 F-SGLE----SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-- 311
           F  GLE        +   H  LIV  ++SK  GL   RVG      +  E + RA     
Sbjct: 217 FARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMK 276

Query: 312 -------YNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKD--VPFLNPYPSYS 362
                   N            L N     + E  + +  +  + ++   V  L    +  
Sbjct: 277 AAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANR 336

Query: 363 NFILCEVTSGM 373
           +F      +GM
Sbjct: 337 DFSFIIKQNGM 347

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

 Score = 54.4 bits (129), Expect = 9e-09
 Identities = 60/372 (16%), Positives = 126/372 (33%), Gaps = 38/372 (10%)

Query: 72  RKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREAL------GQLKFPYI 125
            KL      + F  +S  L ++    + +      +  P  ++E L      G  ++  +
Sbjct: 6   SKLPQLGTTI-FTQMS-ALAQQH-QAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPM 62

Query: 126 YPDPESRRLRAALA----KDSGLESD---HILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
                   LR A+A    +  G + D    I V  GA E +   +  ++  GD+++   P
Sbjct: 63  TGVQA---LREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDP 119

Query: 179 TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238
           ++  Y    A++G  V ++  +            A+  E+ + + L +P+NP  ++    
Sbjct: 120 SYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQA 179

Query: 239 DLLKILEMP--------ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGL 290
           D   + +             V +       G  S +   +  +  + + +F K   + G 
Sbjct: 180 DFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGW 239

Query: 291 RV----GYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLF 346
           +V            I +         N      +A     +   YL + +   ++R+ L 
Sbjct: 240 KVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILV 299

Query: 347 KLLKD--VPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRH----YNNKELKG 399
             L +  +  L    +Y   +     S +D  +    L  + GV          +     
Sbjct: 300 NALNESRLEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHK 359

Query: 400 YVRVSVGKPEHT 411
            +R+   K E T
Sbjct: 360 LIRLCFAKKEST 371

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (127), Expect = 2e-08
 Identities = 66/380 (17%), Positives = 122/380 (32%), Gaps = 63/380 (16%)

Query: 95  EDIVKIDANENPYGPPPEVREALGQL----KFPYIYPDPE-SRRLRAALA----KDSGLE 145
            D+V +      + PP    EA             Y        L   LA    +  G E
Sbjct: 25  HDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQE 84

Query: 146 SD---HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD 202
            D   ++LV  G    +    + ++D GD+++   P F  YE    + G   V V  K  
Sbjct: 85  IDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPG 144

Query: 203 FSLNVELIADA-----------VEREKPKCIFLTSPNNPDGSIINDEDLLKIL----EMP 247
              N EL + +               + K + L +PNNP G + + E+L  +     +  
Sbjct: 145 PIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHD 204

Query: 248 ILVVLDEAYTE--FSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
           ++ + DE Y    + G +  S        +  + + +  K     G +VG+   P  I++
Sbjct: 205 VVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMK 264

Query: 304 YLWRAKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPY----- 358
           +L    Q        +  A  A        +         +  + ++             
Sbjct: 265 HLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV 324

Query: 359 ------PSYSNFILCEVT--------------SGMDAKKLKDDLAKMGVMI-------RH 391
                 P  S F++ +++                 D + +K  +   G++          
Sbjct: 325 GLKPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSV 384

Query: 392 YNNKELKGYVRVSVGKPEHT 411
            + K    Y+R    K E T
Sbjct: 385 PHQKHFDHYIRFCFVKDEAT 404

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]} Length = 361

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

 Score = 51.0 bits (120), Expect = 1e-07
 Identities = 51/335 (15%), Positives = 108/335 (32%), Gaps = 30/335 (8%)

Query: 107 YGPPPEVREALGQ-LKFP-YIYPDPESRRLRAALAK------DSGLESDHILVGCGADEL 158
           +   P + EAL Q L    + Y   ++    AA+A        + ++S  ++ G     +
Sbjct: 11  FATAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYM 70

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSLNVELIADAVE 215
           +  ++R   + G+ +V   P +  +      N   V+ V  +     +  ++  +   + 
Sbjct: 71  VSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLA 130

Query: 216 REKPKCIFLTSPNNPDGSIINDED----LLKILEMPILVVLDEAYTEFSGLESRM--EWV 269
           + + K + L SP NP G +   ++            + V+ DE + +    E        
Sbjct: 131 KPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSN 190

Query: 270 KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVA---------AEV 320
               +  +L + SK   +  L   YG    S     + +       ++            
Sbjct: 191 VARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIA 250

Query: 321 AACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT-SGMDAKKLK 379
           A          L +                        P  +     ++    +D   L+
Sbjct: 251 AYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQ 310

Query: 380 DDLA-KMGVMIRH--YNNKELKGYVRVSVGKPEHT 411
             L  +  V I       +E +G+VR++ G P   
Sbjct: 311 KALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSK 345

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]} Length = 345

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

 Score = 47.9 bits (112), Expect = 1e-06
 Identities = 43/341 (12%), Positives = 94/341 (27%), Gaps = 31/341 (9%)

Query: 102 ANENPYGPPPEVREALGQ--LKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCG--AD 156
           +++N  G  PEV +AL +        Y  D  + +++    +    + +  LV  G  A+
Sbjct: 8   SSDNIAGASPEVAQALVKHSSGQAGPYGTDELTAQVKRKFCEIFERDVEVFLVPTGTAAN 67

Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER 216
            L    M                          +  A +         L++  + +    
Sbjct: 68  ALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTRE 127

Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAY---------TEFSGLESRME 267
           +                      +  + E+  +  + ++             + L S   
Sbjct: 128 KVGDVHTTQPACVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGC 187

Query: 268 WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW------RAKQPYNVSVAAEVA 321
              +      +   S  A   G+         +            RA    +        
Sbjct: 188 SPAEMTWKAGVDALSFGATKNGVLAAEAIVLFNTSLATEMSYRRKRAGHLSSKMRFLSAQ 247

Query: 322 ACAALQNPIYLEVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKD 380
             A L + ++L          +RL + L+ +  +     + +N + C +        + D
Sbjct: 248 IDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRL-----DSAMID 302

Query: 381 DLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECL 418
            L K G     Y+++     VR         E  D L+  +
Sbjct: 303 ALLKAGFGF--YHDRWGPNVVRFVTSFATTAEDVDHLLNQV 341

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

 Score = 38.2 bits (87), Expect = 0.001
 Identities = 42/363 (11%), Positives = 110/363 (30%), Gaps = 37/363 (10%)

Query: 83  FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQLKFPYIYPDPESRRLRAAL 138
           ++++  Q      ++V +   +  +  PPE+ E     L +    Y  P  E    +  +
Sbjct: 19  WDLMYSQNPEVGNEVVPLSVADMEFKNPPELIEGLKKYLDETVLGYTGPTEE---YKKTV 75

Query: 139 AK------DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCP-PTFTMYEFDAAVNG 191
            K         +++D I+   G    +   +R    PGD ++      +  +        
Sbjct: 76  KKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQER 135

Query: 192 AAVVKVPRKSDFS--LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP-- 247
             +     + D    ++ + +    + +  K +   SP+NP G +   ++L KI ++   
Sbjct: 136 KIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLK 195

Query: 248 --ILVVLDEAYTEF---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG------- 295
             +++  DE + +        +  + + +      +   +         +G         
Sbjct: 196 SDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNP 255

Query: 296 ---AFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV 352
                     +             A E+      +            +   + F  +   
Sbjct: 256 DIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHP 315

Query: 353 PFLNPYPSYSNFILCEVTS-GMDAKKLKDDLA-KMGVMIRHYN--NKELKGYVRVSVGKP 408
               P    +     +  +  MD K +++ +  K  +             G+ R+++  P
Sbjct: 316 EIKAPLIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAP 375

Query: 409 EHT 411
              
Sbjct: 376 SSV 378

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]} Length = 420

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

 Score = 38.2 bits (87), Expect = 0.002
 Identities = 52/342 (15%), Positives = 103/342 (30%), Gaps = 41/342 (11%)

Query: 109 PPPEVREALGQL-----KFPYIYPDPE-SRRLRAALAKD-------SGLESDHILVGCGA 155
           P  E+ E   ++      +   Y   E    L+  + K        +GL+ D+++   G+
Sbjct: 54  PRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGS 113

Query: 156 DELIDLIMRCVLDPGDKIVDCP-------PTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
            + +DLI +  LD     V            F  Y  +  V       +          E
Sbjct: 114 QQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDDGMDLNVLERKLSE 173

Query: 209 LIADAVEREKPKCIFLTSPNNP------DGSIINDEDLLKILEMPILVVLDEAYTEFSGL 262
              +   ++      +++ +NP              ++ +  ++ I+         + G 
Sbjct: 174 FDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGE 233

Query: 263 ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAA 322
                +       +VL     +    GLR+G  A     I  + +AKQ  ++   A    
Sbjct: 234 TVDPIFKIGGPERVVLLNTFSKVLAPGLRIGMVAGSKEFIRKIVQAKQSADLCSPAITHR 293

Query: 323 CAALQNPIYLEVKEALIKERERLFK----------LLKDVPFLNPY-PSYSNFILCEVTS 371
            AA     Y  +++          K             D+P +         FI   +  
Sbjct: 294 LAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPE 353

Query: 372 GMDAKKLKDDLAKMGVMIRH----YNNKELKGYVRVSVGKPE 409
           G D  ++ +   +  V            E    +R+S   P 
Sbjct: 354 GFDTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLPP 395

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 37.5 bits (85), Expect = 0.002
 Identities = 52/386 (13%), Positives = 116/386 (30%), Gaps = 52/386 (13%)

Query: 76  PYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREAL-------GQLKFPYIYPD 128
            + PI      + +    P+ I+K+   +           A           +    Y  
Sbjct: 12  VFNPIRTV-SDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFP 70

Query: 129 PE-SRRLRAALAK------------DSGLESDHILV-GCGADELIDLIMRCVLDPGDKIV 174
              S   R A+A              S +  D++++   G+  ++  I          +V
Sbjct: 71  TVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALV 130

Query: 175 DCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234
             P          A          R  +           ++ +K K + +T+P+NP GS 
Sbjct: 131 PQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSN 190

Query: 235 INDEDLLKILEMP----ILVVLDEAYTEFSG-------LESRMEWVKKHDNLIVLRTFSK 283
            + + +  I+ +     + +  DE Y              + +   +     ++L   +K
Sbjct: 191 FSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAK 250

Query: 284 RAGLAGLRVGYGAFPLSIIEYLWRAKQ----------PYNVSVAAEVAACAALQNPIYLE 333
              + G R+G+  +           +           P  V  AA   A          +
Sbjct: 251 NLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQ 310

Query: 334 VKEALIKERERLFKLLKDVPFLNPY-PSYSNFILCEVTSGMDAKKLKDD-------LAKM 385
           +   + +    L+  + +   L P  P  + +++  +      + +K D       L + 
Sbjct: 311 IVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRI-DLEKYRDIKTDVEFFEKLLEEE 369

Query: 386 GVMIRHYNNKELKGYVRVSVGKPEHT 411
            V +         G+ R++  +P   
Sbjct: 370 NVQVLPGTIFHAPGFTRLTTTRPVEV 395

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

 Score = 37.1 bits (84), Expect = 0.003
 Identities = 60/379 (15%), Positives = 119/379 (31%), Gaps = 63/379 (16%)

Query: 95  EDIVKIDANENPYGPPPEVREALGQL-----KFPYIYPDPE-SRRLRAALA----KDSGL 144
              + +      Y  P     AL             Y       RL  AL+    +    
Sbjct: 26  YKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDR 85

Query: 145 E---SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS 201
                  +LV  GA E +   ++  +D GD+++   P F  YE      G     +P K 
Sbjct: 86  TINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKP 145

Query: 202 D----------FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPI--- 248
           +          + L+   +      EK K I + +P+NP G +++  +L  +  +     
Sbjct: 146 NKTGGTISSADWVLDNNELEAL-FNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWN 204

Query: 249 LVVLDEAYTEFSGLESR-----MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
           ++ + +   E    E              +  I + +  K   L G ++G+   P ++++
Sbjct: 205 VLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLK 264

Query: 304 YLWRAKQPYNVSVAAEVAACAALQNPIYL-----------EVKEALIKERERLFKLLKDV 352
            L    Q    + A  +    A+     L            +   L+ +R+ +   L +V
Sbjct: 265 NLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV 324

Query: 353 PFLNPYPSYSNFILCEVTSGMDAKKLKDD-------------LAKMGVMI-------RHY 392
                 P    F++ + +S      L  +                +G+            
Sbjct: 325 GMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEP 384

Query: 393 NNKELKGYVRVSVGKPEHT 411
           N    + +VR    K +  
Sbjct: 385 NKHLGEDFVRYCFFKKDEN 403

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	422
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	100.0
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	100.0
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	100.0
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	100.0
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	100.0
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	100.0
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	100.0
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	100.0
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	100.0
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	100.0
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	100.0
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	100.0
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	100.0
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	100.0
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	100.0
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	100.0
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	100.0
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	100.0
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	100.0
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	100.0
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	100.0
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	100.0
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	100.0
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	100.0
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	100.0
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	99.95
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	99.94
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	99.94
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.93
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	99.93
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	99.93
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	99.92
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	99.92
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	99.91
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	99.91
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	99.9
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	99.9
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	99.89
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.88
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	99.86
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	99.86
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	99.85
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	99.85
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	99.84
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	99.83
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	99.82
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	99.81
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	99.8
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.8
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	99.79
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	99.79
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.78
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	99.78
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	99.77
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	99.76
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.75
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	99.74
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	99.73
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	99.72
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	99.7
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	99.7
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	99.7
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.7
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	99.69
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	99.69
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	99.69
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	99.67
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	99.66
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	99.64
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.64
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	99.64
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	99.62
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	99.62
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	99.62
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	99.61
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	99.59
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	99.58
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	99.54
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	99.54
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	99.49
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	99.43
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	99.42
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	99.14
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	99.11

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.4e-53  Score=406.47  Aligned_cols=341  Identities=32%  Similarity=0.548  Sum_probs=296.8

Q ss_pred             CCCchHHHHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHH
Q 014594           61 LTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAK  140 (422)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~la~  140 (422)
                      ++...++|+.++++.||++..       +.|  ....|+|+.||||+++++.+.+     ...++||+++..+||+++++
T Consensus         2 ~~~~~l~~~~i~~~~~y~~~~-------~~~--~~~~i~L~~ne~p~~~~~~~~~-----~~l~rYPd~~~~~Lr~~ia~   67 (354)
T d1fg7a_           2 VTITDLARENVRNLTPYQSAR-------RLG--GNGDVWLNANEYPTAVEFQLTQ-----QTLNRYPECQPKAVIENYAQ   67 (354)
T ss_dssp             CCHHHHSCHHHHHCCCCCCCC-------CCT--TTCSEECSSCCCSSCCCCCCCC-----CCTTSCCCSSCHHHHHHHHH
T ss_pred             cChHHhhChhhccCCCCCchh-------hcC--CCCCEEeeCCCCCCCCCHHHHH-----HHHhcCCCCcHHHHHHHHHH
Confidence            345667799999999997532       223  2456999999999988764321     22378999998999999999


Q ss_pred             HcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC-EEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCC
Q 014594          141 DSGLESDHILVGCGADELIDLIMRCVLDPGD-KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKP  219 (422)
Q Consensus       141 ~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd-~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~  219 (422)
                      ++|+++++|++|+|+++++..+++++++||| .|+++.|+|..|...++..|.+++.++.+++|.+|+++++..+  .++
T Consensus        68 ~~gv~pe~I~it~Gs~eai~~~~~~~~~pgd~~Vl~~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~d~~~l~~~~--~~~  145 (354)
T d1fg7a_          68 YAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKL--DGV  145 (354)
T ss_dssp             HHTSCGGGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHHHHTSC--TTE
T ss_pred             HhCCChHHeeeccCchHHHHHHHHHhhccccccccccccccccchhhhhccCceeeccccccccccchhhhhhcc--ccc
Confidence            9999999999999999999999999999998 5888999999999999999999999998889999999999877  479


Q ss_pred             eEEEEeCCCCccCcCCCHHHHHHHHcC---CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeee
Q 014594          220 KCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA  296 (422)
Q Consensus       220 ~~i~l~~p~NPtG~~~~~e~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~  296 (422)
                      ++|++|+||||||.+++.+++..++..   +.++|+||+|.+|..+.........++++++++||||.||++|+|+||++
T Consensus       146 ~~v~~~~pnNPtG~~~~~~~~~~~~~~~~~~~~~iidd~~~~f~~~~~~~~~~~~~~~~iv~~S~SK~~~laGlRiGy~i  225 (354)
T d1fg7a_         146 KVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTL  225 (354)
T ss_dssp             EEEEEESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEE
T ss_pred             ceeeccCCCccceeEeeecccccccccccccccccccccchhhccccccchhhcccccceEEeCCccccCCCcccccccc
Confidence            999999999999999999998888764   89999999999998655555556678999999999999999999999999


Q ss_pred             cCHHHHHHHHHhcCCCCCcHHHHHHHHHHccCChH--HH-HHHHHHHHHHHHHHHHccCCCC-cccCCCceEEEEEeCCC
Q 014594          297 FPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIY--LE-VKEALIKERERLFKLLKDVPFL-NPYPSYSNFILCEVTSG  372 (422)
Q Consensus       297 ~~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~~--~~-~~~~~~~~~~~l~~~L~~~~~~-~~~p~~~~f~~~~~~~~  372 (422)
                      +++++++.+.+...+++++.+.+.++..++.+..+  .. ..+++.++|+.+.+.|.++++. .+.|++++|+|++++  
T Consensus       226 ~~~~~i~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~p~~~~f~~~~~~--  303 (354)
T d1fg7a_         226 ANEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK--  303 (354)
T ss_dssp             ECHHHHHHHHHHSCSSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET--
T ss_pred             ccchhhhhhhhhcCccchhhHHHHHHHHHHhhhccccccccchhhhhHHHHHHHHHHhCCCcceeCCCCceEEEEeCC--
Confidence            99999999999999999999998888888876533  33 6677889999999999999876 467999999999996  


Q ss_pred             CCHHHHHHHHHhCCcEEEeCCC-CCCCCeEEEEecChhhHHHHHHHHhh
Q 014594          373 MDAKKLKDDLAKMGVMIRHYNN-KELKGYVRVSVGKPEHTDALMECLMH  420 (422)
Q Consensus       373 ~~~~~~~~~L~~~gI~v~~~~~-~~~~~~iRis~~~~~~~~~l~~al~~  420 (422)
                       +++++++.|.++||.|++++. ++.++|+|||++++++++++.++|+.
T Consensus       304 -~~~~~~~~L~~~gIlvr~~~~~~~~~~~lRisigt~ee~~~~l~aLka  351 (354)
T d1fg7a_         304 -ASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVGTREESQRVIDALRA  351 (354)
T ss_dssp             -THHHHHHHHHHTTEECEECTTSTTCTTEEEEECCCHHHHHHHHHHHHT
T ss_pred             -CHHHHHHHHHHCCcEEecCCCCCCCCCEEEEEeCCHHHHHHHHHHHhh
Confidence             688999999999999999877 56789999999999999999999974

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=7.9e-53  Score=409.47  Aligned_cols=351  Identities=23%  Similarity=0.355  Sum_probs=294.7

Q ss_pred             HHHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCC-cchHHHHHHHHHHc--
Q 014594           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPD-PESRRLRAALAKDS--  142 (422)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y~~-~~~~~lr~~la~~~--  142 (422)
                      ++++.+++|+ +...+...++++...+.++|+|+.|++++++|+++++++.+ +.. ..+|+. .|..+||+++++++  
T Consensus         5 ~~r~~~~~~s-~~~~i~~~a~~~~~~G~~vi~l~~g~p~~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lR~~ia~~~~~   83 (382)
T d1b5pa_           5 SRRVQAMKPS-ATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRR   83 (382)
T ss_dssp             CHHHHHCCCC-HHHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCC-HHHHHHHHHHHHHhCCCCeEECCCCCCCCCCCHHHHHHHHHHHhcCCcCCCCCCCCHHHHHHHHhhhhh
Confidence            4556667776 34445555566666778999999999999999999999876 332 367855 48999999999987  


Q ss_pred             ----CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhc
Q 014594          143 ----GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER  216 (422)
Q Consensus       143 ----~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~  216 (422)
                          ++++++|++|+|+++++..++++++++||.|+++.|+|..|...++..|++++.++..  +++.+|++++++.++ 
T Consensus        84 ~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-  162 (382)
T d1b5pa_          84 ENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-  162 (382)
T ss_dssp             TTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCC-
T ss_pred             hcccccccccceecCCHHHHHHHHHHHhCCCCCEEEECCCCcHHHHHHHHHhcCeEEEEecccccccCCCHHHHHHhCC-
Confidence                5688999999999999999999999999999999999999999999999999999843  567899999999997 


Q ss_pred             CCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCchh-hhhhcCCcEEEEccChhhhcccccc
Q 014594          217 EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRM-EWVKKHDNLIVLRTFSKRAGLAGLR  291 (422)
Q Consensus       217 ~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~-~~~~~~~~~i~~~S~SK~~~~~G~r  291 (422)
                      ++++++++||||||||.+++.+++++|++.    +++||+||+|.++.+++... ......+++++++||||.|+++|+|
T Consensus       163 ~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlR  242 (382)
T d1b5pa_         163 PRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWR  242 (382)
T ss_dssp             TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGGGC
T ss_pred             CCCeEEEECCCCCCcchhCCHHHHHHHHHHHHHcCeEEEEEccccceecCCCCCCHHHcCCCCEEEEecchhhccCcHhh
Confidence            789999999999999999999999999874    99999999999988654322 2223468999999999999999999


Q ss_pred             ceeeecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCC----hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceE
Q 014594          292 VGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNP----IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNF  364 (422)
Q Consensus       292 ~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~----~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f  364 (422)
                      +||+++++++++.+......  .+.+...+.++..++.+.    .+.. .++.++++++.+.+.+...+.....|++|+|
T Consensus       243 ~G~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~p~gg~~  322 (382)
T d1b5pa_         243 IGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFY  322 (382)
T ss_dssp             CEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSBTTE
T ss_pred             eEEEEECHHHHHHHHHHHHhcccCcccccccccccccccccchhHHHHHHHHHHHhhhhHHHHHHhhcCCeEecCCceEE
Confidence            99999999999988765543  566778887777777653    3444 7778888999999999888755567889999


Q ss_pred             EEEEeCC-CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          365 ILCEVTS-GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       365 ~~~~~~~-~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      +|+++++ ..+...+.+.|.++||.++||..++.++++||+++.++  ++|.+++++|+
T Consensus       323 ~~~~~~~~~~~~~~~~~~l~e~gV~v~PG~~F~~~~~iRis~~~~~--e~l~~al~rl~  379 (382)
T d1b5pa_         323 VLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYATSE--ENLRKALERFA  379 (382)
T ss_dssp             EEEECTTTCSSHHHHHHHHHHTTEECEESGGGTCTTEEEEECCSCH--HHHHHHHHHGG
T ss_pred             EeEeCCCCCCCHHHHHHHHHHCCEEEEeCcccCCCCeEEEEEcCCH--HHHHHHHHHHH
Confidence            9999954 56788899999999999999988888899999998754  66999999874

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=100.00  E-value=5.1e-52  Score=404.38  Aligned_cols=349  Identities=21%  Similarity=0.325  Sum_probs=296.4

Q ss_pred             HHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCC-CcchHHHHHHHHHHc---
Q 014594           69 SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYP-DPESRRLRAALAKDS---  142 (422)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y~-~~~~~~lr~~la~~~---  142 (422)
                      .++..++|+ +...+...++++...+.++|+|+.|++++++|+.+++++.+ ++. ..+|+ ..|..+||+++++++   
T Consensus         5 ~~~~~~~~s-~~~~i~~~a~~~~~~g~~vi~l~~G~p~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~   83 (388)
T d1j32a_           5 ARVESVSPS-MTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRD   83 (388)
T ss_dssp             HHHHTSCCC-SSTTTHHHHHHHHTTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHH
T ss_pred             hHhhcCCcC-HHHHHHHHHHHHHHCCCCeEECCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHh
Confidence            456778887 56667777888877788999999999999999999999876 332 25684 458999999999986   


Q ss_pred             ---CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhcC
Q 014594          143 ---GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVERE  217 (422)
Q Consensus       143 ---~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~  217 (422)
                         ++++++|++|+|+++++..+++++++|||+|++++|+|..|...++..|++++.++.  +++|.+|++++++.++ +
T Consensus        84 ~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~l~~~~~-~  162 (388)
T d1j32a_          84 NGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAIT-P  162 (388)
T ss_dssp             HCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCC-T
T ss_pred             cccCCCCceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCCcHHHHHHHHHhcCeEEEEecccccccCCCHHHHHHhCC-C
Confidence               467899999999999999999999999999999999999999999999999999984  3568899999999997 7


Q ss_pred             CCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCchh---hhh--hcCCcEEEEccChhhhccc
Q 014594          218 KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRM---EWV--KKHDNLIVLRTFSKRAGLA  288 (422)
Q Consensus       218 ~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~---~~~--~~~~~~i~~~S~SK~~~~~  288 (422)
                      ++++++++|||||||.+++.+++++|++.    +++||+||+|.++.++....   ...  ...+++++++||||.|+++
T Consensus       163 ~~~~~~~~~P~NPTG~~~~~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~  242 (388)
T d1j32a_         163 KTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMT  242 (388)
T ss_dssp             TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCT
T ss_pred             CCeEEEECCCCCCCCcccchhhhhhhhcccccCCeEEEchhhhhcccccCCCCCCHHHhCcccccceeEecCChhhhhcc
Confidence            89999999999999999999999999875    99999999999887654321   111  1246899999999999999


Q ss_pred             cccceeeecCHHHHHHHHHhcC--CCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCce
Q 014594          289 GLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSN  363 (422)
Q Consensus       289 G~r~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~  363 (422)
                      |+|+||+++++++++.+.+...  ..+.+...|.++..++.+ .+|++ .++.++++++.+.+.|++++++. ..|++|+
T Consensus       243 GlRvG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~p~gg~  322 (388)
T d1j32a_         243 GWRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAF  322 (388)
T ss_dssp             TTCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCCBTT
T ss_pred             hhHeEEEEECHHHHHHHHHhhhhccccccHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCEecCCCceE
Confidence            9999999999999998876653  367788899888888875 47888 99999999999999999986555 4577889


Q ss_pred             EEEEEeCC-CCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          364 FILCEVTS-GMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       364 f~~~~~~~-~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      |+|++++. +.++.++++.|+ ++||.+.||..++.++++||+++.++  ++|.+++++|
T Consensus       323 ~l~~~l~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~Rls~~~~~--e~l~~al~rl  380 (388)
T d1j32a_         323 YMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDL--DTIKRGMERL  380 (388)
T ss_dssp             EECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCH--HHHHHHHHHH
T ss_pred             EEEEECCCCCCCHHHHHHHHHHhCCEEEEeccccCCCCeEEEEEeCCH--HHHHHHHHHH
Confidence            99999974 567888988876 78999999998888999999998654  5688888776

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=100.00  E-value=2.5e-49  Score=380.97  Aligned_cols=337  Identities=26%  Similarity=0.413  Sum_probs=289.3

Q ss_pred             CCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHH
Q 014594           79 PILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADE  157 (422)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~  157 (422)
                      .+..+...++++|.++.++|||+.|+||+++++.+++++.+ .....+||+++..+||+++++++++++++|++|+|+++
T Consensus         6 hgg~~~~~~~~~g~~p~~~idls~~~np~~~p~~~~~a~~~~~~~~~~Yp~~~~~~Lr~aia~~~~v~~~~I~~~~g~~~   85 (355)
T d1lc5a_           6 HGGNIREPATVLGISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDADYFHLHQALARHHQVPASWILAGNGETE   85 (355)
T ss_dssp             SSCCCHHHHHHHTSCGGGSEECSSCCCTTCCCHHHHHHHHHTGGGGGSCCCTTCHHHHHHHHHHHTSCGGGEEEESSHHH
T ss_pred             CCCHHHHHHHHhCCChhheEEccCCCCCCCCCHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHhCCCHHHEEecccHHH
Confidence            35567778999999999999999999999999999999987 44446799988899999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594          158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (422)
Q Consensus       158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (422)
                      ++..++..+.  ++.+++..|.|..|.......+++++.++.  ++++.++ +.+++.+. +++|+|+++|||||||.++
T Consensus        86 ~~~~~~~~~~--~~~~~v~~p~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~-~~~~~v~l~nP~NPtG~~~  161 (355)
T d1lc5a_          86 SIFTVASGLK--PRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLT-DAILEALT-PDLDCLFLCTPNNPTGLLP  161 (355)
T ss_dssp             HHHHHHHHHC--CSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCC-TTHHHHCC-TTCCEEEEESSCTTTCCCC
T ss_pred             HHHHHHhhhc--cccccccCCccceeccccccccccceeeeeeccCCccce-eeeeeccc-cccceeeeecccCcccccc
Confidence            9998888653  455667788999888888889999988885  3455555 45666665 7899999999999999999


Q ss_pred             CHHHHHHHHcC----CCeEEEccCCccccCCCc-hhhhhhcCCcEEEEccChhhhccccccceeeecCHH-HHHHHHHhc
Q 014594          236 NDEDLLKILEM----PILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLWRAK  309 (422)
Q Consensus       236 ~~e~l~~i~~~----~~~li~Deay~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~-~~~~l~~~~  309 (422)
                      +.+++.+|++.    ++++|+||+|.+|..... ........+++++++||||.||++|+|+||++++.+ +.+.+.+..
T Consensus       162 ~~e~l~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlR~G~~i~~~~~~~~~~~~~~  241 (355)
T d1lc5a_         162 ERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQ  241 (355)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHS
T ss_pred             hhhhhhhhhhhccccccccccccceeeeeeecccccccccccccceeecccccccccccccccceeccchhhhHHHHhhc
Confidence            99999999875    999999999999886543 333445678999999999999999999999999765 556677777


Q ss_pred             CCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014594          310 QPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVM  388 (422)
Q Consensus       310 ~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~  388 (422)
                      .+++.+.+++.++.++|++.++.. .+++++++++++.+.|.++++..+.|++++|+|++++.  ++.++++.|+++||.
T Consensus       242 ~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~f~~~~~~~--~~~~~~~~L~~~gv~  319 (355)
T d1lc5a_         242 MPWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVYPGRANYLLLRCER--EDIDLQRRLLTQRIL  319 (355)
T ss_dssp             CTTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCCSSSEEEEEESC--TTCCHHHHHHTTTEE
T ss_pred             CCccccccccccccccccccchhHHHHHHHHHHHHHHHHHHhhcCCcEECCCCCEEEEEECCC--CHHHHHHHHHHCCcE
Confidence            789999999999999999988888 89999999999999999998778889999999999973  567889999999999


Q ss_pred             EEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          389 IRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       389 v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      |+++..+.  .++|+||+++++++++++.++|+++
T Consensus       320 vr~~~~f~~~~~~~iRis~~~~~e~~~li~aL~~i  354 (355)
T d1lc5a_         320 IRSCANYPGLDSRYYRVAIRSAAQNERLLAALRNV  354 (355)
T ss_dssp             CEECTTSTTCCTTEEEEECCCHHHHHHHHHHHHHH
T ss_pred             EEeCccCCCCCCCEEEEEeCCHHHHHHHHHHHHHh
Confidence            99987632  4689999999999999999999876

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=9.6e-50  Score=388.41  Aligned_cols=324  Identities=23%  Similarity=0.374  Sum_probs=274.1

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCC-cchHHHHHHHHHHc-------CCCCCCEEEeCCHHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPD-PESRRLRAALAKDS-------GLESDHILVGCGADELIDLIMR  164 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y~~-~~~~~lr~~la~~~-------~~~~~~i~~~~G~~~al~~~~~  164 (422)
                      +++|+|+.|++++++|+.+++++.+ +.. ..+|+. .|..+||+++++++       ..++++|++|+|+++++..++.
T Consensus        25 ~dvi~l~~g~p~~~~p~~v~~~~~~a~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~  104 (388)
T d1gdea_          25 KDVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLS  104 (388)
T ss_dssp             TTCEECCCCSCCSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHT
T ss_pred             CCeEECCCCCCCCCCCHHHHHHHHHHHhcCccCCCCCcCCHHHHHHHHHHHHhhccccCCChheeeeccCcchHHHHHHH
Confidence            5789999999999999999998876 332 367854 58999999999986       2456789999999999999999


Q ss_pred             HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHH
Q 014594          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (422)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~  242 (422)
                      +++++||+|+++.|+|..|...++..|++++.++.  +++|++|++++++.++ +++++++++|||||||.+++.+++++
T Consensus       105 ~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~P~NPtG~~~s~~~~~~  183 (388)
T d1gdea_         105 AFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVT-DKTRALIINSPCNPTGAVLTKKDLEE  183 (388)
T ss_dssp             TTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             HhcCCCCEEEECCCCcHHHHHHHHHcCCEEEEeecccccCCCCCHHHHHHhCc-cCCeEEEECCCcCCCCCcCCHHHHHH
Confidence            99999999999999999999999999999999995  3578999999999997 78999999999999999999999999


Q ss_pred             HHcC----CCeEEEccCCccccCCCch----hhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--C
Q 014594          243 ILEM----PILVVLDEAYTEFSGLESR----MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--Y  312 (422)
Q Consensus       243 i~~~----~~~li~Deay~~~~~~~~~----~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~  312 (422)
                      |++.    +++||+||+|.++.+++..    .......+++++++||||.||++|+|+||+++++++++.+......  +
T Consensus       184 l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~ii~~~~~~~~~~~~~~~~~~  263 (388)
T d1gdea_         184 IADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVKFQMYNAT  263 (388)
T ss_dssp             HHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHTTTC
T ss_pred             HHHHHHHcCCEEEEEcCChhhhhccCCCCChhhccCCCCeEEEEeCChhhccCccccEEEEEeeccchhhhhhccccccc
Confidence            8874    9999999999998764421    2222335789999999999999999999999999999888776544  5


Q ss_pred             CCcHHHHHHHHHHccCChH---HH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC-CCCHHHHHHHHH-hCC
Q 014594          313 NVSVAAEVAACAALQNPIY---LE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDLA-KMG  386 (422)
Q Consensus       313 ~~~~~~~~aa~~~L~~~~~---~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~-~~~~~~~~~~L~-~~g  386 (422)
                      +.+.+.|.++..+++++.+   +. .++.++++++.+.+.|...+.....|++|+|+|+++++ +.+++++++.|+ ++|
T Consensus       264 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~gg~fl~~~l~~~~~~~~~~~~~ll~e~g  343 (388)
T d1gdea_         264 CPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEAR  343 (388)
T ss_dssp             SCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHTC
T ss_pred             cccccchhhHHHHHhhccchhHHHHHHHHHHHhhhhhhhhhhhccccccCCCceEEEEEECCCCCCCHHHHHHHHHHhCC
Confidence            6788899999999988644   33 67788889999999999887666678899999999974 678999998876 789


Q ss_pred             cEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          387 VMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       387 I~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      |.++||..+  ..++|+||+++.+.  ++|.+++++|
T Consensus       344 V~v~PG~~F~~~~~~~iRis~~~~~--e~l~~al~rL  378 (388)
T d1gdea_         344 VAVVPGSAFGKAGEGYVRISYATAY--EKLEEAMDRM  378 (388)
T ss_dssp             EECEEGGGGCGGGTTBEEEECCSCH--HHHHHHHHHH
T ss_pred             EEEEechhhCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence            999998874  34789999998654  4577777665

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=6.5e-48  Score=367.78  Aligned_cols=314  Identities=30%  Similarity=0.469  Sum_probs=272.4

Q ss_pred             hCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCC--CCCCCCcchHHHHHHHHHHcC---CCCCCEEEeCCHHHHHHHHH
Q 014594           90 LGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF--PYIYPDPESRRLRAALAKDSG---LESDHILVGCGADELIDLIM  163 (422)
Q Consensus        90 ~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~--~~~y~~~~~~~lr~~la~~~~---~~~~~i~~~~G~~~al~~~~  163 (422)
                      +...+.|+|+|+.|+||+++|+.+.+++.+ +..  .++||+.|..+||++++++++   +++++|++|+|+++++.+++
T Consensus        14 ~~~~~~d~~~l~~~enp~~~p~~i~~~~~~~~~~~~~~~yp~~g~~~Lr~aia~~~~~~~v~~d~I~it~G~~~~l~~l~   93 (334)
T d2f8ja1          14 YETEKRDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMM   93 (334)
T ss_dssp             CCCCCCCSEECSSCCCSSCCCHHHHHHHHHHCCTTGGGSCCCSSCHHHHHHHHHHHTCSSCCGGGEEEEEHHHHHHHHHH
T ss_pred             ccccCCCceEEECCCCCCCCCHHHHHHHHHHhhcchhcCCCCCCcHHHHHHHHHHhcccCCCcceEEecCcchhHHHHHh
Confidence            445678999999999999999999988875 432  256788899999999999984   67899999999999998876


Q ss_pred             HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (422)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i  243 (422)
                      +    +||+|+++.|+|..|...++..|++++.+|.++++..+     +.. ..++++++++|||||||.+++.+++.++
T Consensus        94 ~----~~d~v~i~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~-----~~~-~~~~~~l~l~nP~NPtG~~~s~~~l~~~  163 (334)
T d2f8ja1          94 L----MFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIP-----EVN-VGEGDVVFIPNPNNPTGHVFEREEIERI  163 (334)
T ss_dssp             H----HSSEEEECSSCCHHHHHHHHHHTCCEEECCCCTTSCCC-----CCC-CCTTEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             h----hccccccccccccccccchhccCCcccccccccccccc-----ccc-cccceEEEecccccccceeecHHHhhcc
Confidence            6    46999999999999999999999999999976654443     122 2688999999999999999999999999


Q ss_pred             HcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCCCcHHHHHHHH
Q 014594          244 LEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAAC  323 (422)
Q Consensus       244 ~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~~~~~~~~aa~  323 (422)
                      ++.++++|+||+|.++...... ......+++++++||||.++++|+|+||+++++++++++...+..++++..+|.++.
T Consensus       164 ~~~~~~ii~Dd~~~~~~~~~~~-~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~i~~l~~~~~~~~~s~~~~~~a~  242 (334)
T d2f8ja1         164 LKTGAFVALDEAYYEFHGESYV-DFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAK  242 (334)
T ss_dssp             HTTTCEEEEECTTGGGTCCCCG-GGGGTCSSEEEEEESTTTSSCTTTCEEEEEECHHHHHHHHHHSCTTCSCHHHHHHHH
T ss_pred             ccceeEEeecccchhhcccccc-cccccCceEEEEecCccccchhhhhhhhcccchHHHHHHHHhhcccccchhhhhhcc
Confidence            9889999999999887654332 233467899999999999999999999999999999999999999999999999999


Q ss_pred             HHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEE
Q 014594          324 AALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVR  402 (422)
Q Consensus       324 ~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iR  402 (422)
                      +++.+.++.+ .++.++++|+.+.+.|+++| +.+.|++|+|+|+.++. .+++++.+.|+++||.|+++.     +|+|
T Consensus       243 ~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~g~f~~~~~~~-~~~~~~~~~L~~~GI~vr~~~-----~~vR  315 (334)
T d2f8ja1         243 VALDHREIFEERTKFIVEERERMKSALREMG-YRITDSRGNFVFVFMEK-EEKERLLEHLRTKNVAVRSFR-----EGVR  315 (334)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEECCCCSSEEEEECCH-HHHHHHHHHHHHTTEECEEET-----TEEE
T ss_pred             cccccccchhhHHHHHHHHHHHHHHHHHHCC-CeECCCCceEEEEECCC-CCHHHHHHHHHHCCCEECCCC-----CeEE
Confidence            9999988888 88999999999999999987 45667788899999874 478899999999999998764     8999


Q ss_pred             EEecChhhHHHHHHHHhhh
Q 014594          403 VSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       403 is~~~~~~~~~l~~al~~l  421 (422)
                      ||+++.++++++.++|+.+
T Consensus       316 is~g~~ee~~~l~~~l~~f  334 (334)
T d2f8ja1         316 ITIGKREENDMILRELEVF  334 (334)
T ss_dssp             EECCCHHHHHHHHHHHHHC
T ss_pred             EEcCCHHHHHHHHHHHhcC
Confidence            9999998889999998863

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=6.1e-48  Score=373.93  Aligned_cols=345  Identities=21%  Similarity=0.327  Sum_probs=282.2

Q ss_pred             HhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCc-chHHHHHHHHHHc----
Q 014594           70 HLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDP-ESRRLRAALAKDS----  142 (422)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~y~~~-~~~~lr~~la~~~----  142 (422)
                      ++..+..+. ...+...+++....+.++|+|+.|++++++|+.+++++.+. . ...+|+++ |..+||+++++++    
T Consensus         4 r~~~~~~~~-~~~~~~~a~~~~~~G~~vI~l~~G~p~~~~p~~i~~~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~   82 (375)
T d1o4sa_           4 RISEIPISK-TMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERY   82 (375)
T ss_dssp             HHHHSCCCS-SHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHH
T ss_pred             hhhhCCCCH-HHHHHHHHHHHHHCCCCeEECCCcCCCCCCCHHHHHHHHHHHhcCCcCCCCCcCCHHHHHHHHhhhhhcc
Confidence            344444443 23455566666666788999999999999999999998763 2 33678654 8999999999986    


Q ss_pred             --CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhcCC
Q 014594          143 --GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREK  218 (422)
Q Consensus       143 --~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~  218 (422)
                        .+++++|++|+|+++++..++++++++||.|+++.|+|+.|.......|...+.++.  ++++.+|.+.++.... .+
T Consensus        83 ~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  161 (375)
T d1o4sa_          83 KKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLV-GK  161 (375)
T ss_dssp             TCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCC-TT
T ss_pred             ccccccccccccCcHHHHHHHHHHHHhCCCCEEEEccCccccchhhhhccccccccccccccccccchhHHHHHhhc-cC
Confidence              367899999999999999999999999999999999999999999999999888774  4567888999988876 78


Q ss_pred             CeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhcccccc
Q 014594          219 PKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLR  291 (422)
Q Consensus       219 ~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r  291 (422)
                      +++++++|||||||.+++.+++++|++.    +++||+||+|.++.++..   .....+.++++++++||||.|+++|+|
T Consensus       162 ~~~~~l~nP~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~G~R  241 (375)
T d1o4sa_         162 TKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWR  241 (375)
T ss_dssp             EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGC
T ss_pred             ccEEEEeCCCCCccCCCCHHHHHHHHHhHHHcCCceehHhhhccccccccccccccccCCCCCEEEEeechhhccCCccc
Confidence            9999999999999999999999999875    999999999998876442   233445678999999999999999999


Q ss_pred             ceeeecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEE
Q 014594          292 VGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCE  368 (422)
Q Consensus       292 ~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~  368 (422)
                      +||++++++.++.+......  ...+...+..+...++.  +.. .++.++++++.+.+.|++.++....|++|+|+|++
T Consensus       242 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~r~~~~~~~l~~~g~~~~~p~gg~f~~~~  319 (375)
T d1o4sa_         242 VGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEV--DNSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFK  319 (375)
T ss_dssp             CEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSBSSEEEEE
T ss_pred             cccccccccchhhhhhhhccccccccccchhhhhhhccc--chhhhHHHHHHHHHHHHHHHHhcCceEecCCccEEEEEE
Confidence            99999999999888766554  34556666666665543  333 67788999999999999987655668889999999


Q ss_pred             eCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          369 VTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       369 ~~~~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      ++.  +..+++..|+ ++||.+++|..++.++|+||+++.++  ++|.+++++|+
T Consensus       320 ~~~--~~~~~~~~ll~~~gV~v~pG~~F~~~g~iRis~~~~~--e~l~~al~rl~  370 (375)
T d1o4sa_         320 VRG--DDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSI--ERLTEALDRIE  370 (375)
T ss_dssp             CSS--CHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCH--HHHHHHHHHHH
T ss_pred             CCC--CHHHHHHHHHHhCCEEEEEccccCCCCeEEEEEcCCH--HHHHHHHHHHH
Confidence            973  5667776765 78999999988888899999998754  67888888763

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=100.00  E-value=1e-47  Score=374.70  Aligned_cols=332  Identities=23%  Similarity=0.360  Sum_probs=273.4

Q ss_pred             HHHhCCCCCCeEEcCCCCC---CCCCCHHHHHHHhc-CCC-CCCCCCc-chHHHHHHHHHHc------CCCCCCEEEeCC
Q 014594           87 SIQLGRKPEDIVKIDANEN---PYGPPPEVREALGQ-LKF-PYIYPDP-ESRRLRAALAKDS------GLESDHILVGCG  154 (422)
Q Consensus        87 ~~~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~-~~~-~~~y~~~-~~~~lr~~la~~~------~~~~~~i~~~~G  154 (422)
                      ++++...+.++|+|+.|++   ++++|+.+++++.+ +.. .++|++. |..+||+++++++      .+++++|++|+|
T Consensus        22 a~~l~~~G~~vi~l~~G~P~~~df~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~i~i~~G  101 (395)
T d1xi9a_          22 ARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAA  101 (395)
T ss_dssp             HHHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESH
T ss_pred             HHHHHHCCCCeEECCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhcccccccccccccccc
Confidence            4455555678999999985   78999999999886 333 2568554 8999999999986      457889999999


Q ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEec--CCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccC
Q 014594          155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG  232 (422)
Q Consensus       155 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG  232 (422)
                      +++++.+++.+++++||+|++++|+|+.|...++..|++++.++  .+++|.+|++++++.+. +++++++++|||||||
T Consensus       102 ~~~~~~~~~~~~~~~Gd~vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~~~~~-~~~~~v~l~~P~NPTG  180 (395)
T d1xi9a_         102 VTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKIT-DRTKAIAVINPNNPTG  180 (395)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCC-TTEEEEEEESSCTTTC
T ss_pred             cchhhhhhhhhhcCCCCEEEEcCCccccchhhhhhcCCEEEEEeccccccccchHHHHHHhhc-ccccEEEecCCCCCcc
Confidence            99999999999999999999999999999999999999999998  34678899999999997 7899999999999999


Q ss_pred             cCCCHHHHHHHHcC----CCeEEEccCCccccCCCc--hhhhhhcCCcEEEEccChhhhccccccceeeec--CHHHHHH
Q 014594          233 SIINDEDLLKILEM----PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--PLSIIEY  304 (422)
Q Consensus       233 ~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~--~~~~~~~  304 (422)
                      .+++.+++++|++.    ++++|+||+|.++.++..  ........+++|+++||||.|+++|+|+||+++  +...+..
T Consensus       181 ~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRvG~~~~~~~~~~~~~  260 (395)
T d1xi9a_         181 ALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSE  260 (395)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHH
T ss_pred             chhhHHHHHHHHhhhhhcCeeEEeccccccccccccccchhhcCCCCCEEEEeCcchhcccchhhcEeeEecCHHHHHHH
Confidence            99999999999886    999999999999876542  233345677899999999999999999999875  2233232


Q ss_pred             HHH----h-cCCCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCC--CCC
Q 014594          305 LWR----A-KQPYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS--GMD  374 (422)
Q Consensus       305 l~~----~-~~~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~--~~~  374 (422)
                      +.+    . ...++.+.++|.++..++.+ .+|++ .++.++++++.+.+.|+++++..+ .|++|+|+|++++.  ..+
T Consensus       261 ~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~gg~~~~~~l~~~~~~~  340 (395)
T d1xi9a_         261 VREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPWKN  340 (395)
T ss_dssp             HHHHHHHHHHHTCCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECSCSCSS
T ss_pred             HHHHHHHhhcCCCCcCHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhCCCceecCCCeeEEEeEECCCCCCCC
Confidence            222    1 12456788889988888875 57888 899999999999999999886654 57789999999974  346


Q ss_pred             HHHHHHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          375 AKKLKDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       375 ~~~~~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ..+++..|+ ++||.+.||..++  .++|+||+++.+.  +++.+++++|
T Consensus       341 ~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~Ris~~~~~--e~l~eal~rl  388 (395)
T d1xi9a_         341 DKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPI--EILEEAMDRF  388 (395)
T ss_dssp             HHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCH--HHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCEEEEcChhhCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence            777877766 7899999988743  3789999998754  5688888876

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=100.00  E-value=1.8e-46  Score=368.66  Aligned_cols=324  Identities=20%  Similarity=0.288  Sum_probs=269.5

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcC-C----CCCCCCC-cchHHHHHHHHHHc----C--CC-CCCEEEeCCHHHHHHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQL-K----FPYIYPD-PESRRLRAALAKDS----G--LE-SDHILVGCGADELIDLI  162 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~----~~~~y~~-~~~~~lr~~la~~~----~--~~-~~~i~~~~G~~~al~~~  162 (422)
                      ++|+|+.|++++++|+.+++++.+. .    ..++|++ .|..+||++||+++    |  ++ .++|++|+|+++++.++
T Consensus        27 ~~I~L~~G~Pd~~~p~~i~eal~~a~~~~~~~~~~Y~~~~G~~~lReaiA~~~~~~~g~~~~p~~~I~it~G~~~al~~~  106 (418)
T d2r5ea1          27 KPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYAT  106 (418)
T ss_dssp             CCEECSSSCCSSCCCHHHHHHHHHHHTCSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHH
T ss_pred             CCEEccCCCCCCCCCHHHHHHHHHHHhCCCccCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCccceEEEcCCCchhhhhh
Confidence            4699999999999999999988762 2    1256854 48999999999986    4  45 47999999999999999


Q ss_pred             HHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC----------CCCCCHHHHHHHhhcCCCeEEEEeCCCCccC
Q 014594          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS----------DFSLNVELIADAVEREKPKCIFLTSPNNPDG  232 (422)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~----------~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG  232 (422)
                      +++++++||.|+++.|+|+.|...+...|++++.++.+.          .+..+++++.+... .+++++++++||||||
T Consensus       107 ~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~p~NPtG  185 (418)
T d2r5ea1         107 IQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFN-EKTKMIIINTPHNPLG  185 (418)
T ss_dssp             HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEESCCSSCEEGGGEECCHHHHHHHCC-TTEEEEEEESSCTTTC
T ss_pred             hhhccccccceeccccccchhhHHHHHcCCeEEEEEecccccccchhhhhhhhhHHHHhhhhh-ccccceecCCcCcccc
Confidence            999999999999999999999999999999999988432          24578899988876 7899999999999999


Q ss_pred             cCCCHHHHHHHHcC----CCeEEEccCCccccCCCc----hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHH
Q 014594          233 SIINDEDLLKILEM----PILVVLDEAYTEFSGLES----RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY  304 (422)
Q Consensus       233 ~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~----~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~  304 (422)
                      .+++.+++++|++.    ++++|+||+|.++.+++.    .....+..+++++++|+||.++++|+|+||+++++++++.
T Consensus       186 ~~~s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~i~~  265 (418)
T d2r5ea1         186 KVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLKN  265 (418)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCGGGCCEEEESCHHHHHH
T ss_pred             ccccHHHHHHHhhhhhcCCeeeecccchhhhccCCCccccccccccccceeeeeecCCccccCCCcccccccccchhhhh
Confidence            99999999999875    999999999999886542    2233344678999999999999999999999999999999


Q ss_pred             HHHhcCC--CCCcHHHHHHHHHHccC--------ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC--
Q 014594          305 LWRAKQP--YNVSVAAEVAACAALQN--------PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS--  371 (422)
Q Consensus       305 l~~~~~~--~~~~~~~~~aa~~~L~~--------~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~--  371 (422)
                      +.+....  ++.+.+.|.++...+..        .+|+. +++.++.+|+.+.+.|+++++....|++|+|+|++++.  
T Consensus       266 ~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~P~gg~f~~~~~~~~~  345 (418)
T d2r5ea1         266 LQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLD  345 (418)
T ss_dssp             HHHHHTTTTCSCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHTTCEEEECSBSSEEEEECGGGS
T ss_pred             hhhcccccccccccchhhhccccccccccccccchhhHHHHHHHHHHhhhhHHhhHhhcCCcccCCCceeEEEEEccccc
Confidence            9876653  67788888777766542        36777 89999999999999999997655679999999999852  


Q ss_pred             ----------CCCHHHHHHHHH-hCCcEEEeCCCCC-------CCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          372 ----------GMDAKKLKDDLA-KMGVMIRHYNNKE-------LKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       372 ----------~~~~~~~~~~L~-~~gI~v~~~~~~~-------~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                                ..+..++++.|+ ++||.+.||..+.       +++|||||++.++  ++|.+++++|+
T Consensus       346 ~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~g~~~iRis~~~~~--e~l~~a~~rl~  412 (418)
T d2r5ea1         346 SKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKD--ENLQKAAEILR  412 (418)
T ss_dssp             TTCCGGGCCCSSHHHHHHHHHHHHHSEECBCGGGGSCGGGHHHHTTEEEEECCSCH--HHHHHHHHHHH
T ss_pred             ccccchhcccccCHHHHHHHHHHHCCEEEeCchhhCCCCCccCCCCEEEEEecCCH--HHHHHHHHHHH
Confidence                      246778888887 6799999987642       2579999998754  56888888763

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=1.3e-45  Score=362.00  Aligned_cols=327  Identities=17%  Similarity=0.220  Sum_probs=261.5

Q ss_pred             CCCCeEEcCCCCCCCCC----CHHHHHHHhc-C--CCCCCCCC-cchHHHHHHHHHHc------------CCCCCCEEEe
Q 014594           93 KPEDIVKIDANENPYGP----PPEVREALGQ-L--KFPYIYPD-PESRRLRAALAKDS------------GLESDHILVG  152 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~----~~~v~~al~~-~--~~~~~y~~-~~~~~lr~~la~~~------------~~~~~~i~~~  152 (422)
                      .+.++|+|+.|++++++    ++.+.+++.+ .  ...++|+. .|.++||+++++++            ++++++|++|
T Consensus        28 ~~~~vI~L~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~~~~~~~I~it  107 (412)
T d1bw0a_          28 SPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLC  107 (412)
T ss_dssp             SCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEE
T ss_pred             CCCCcEECcCCCCCCCCCccccHHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHHHHHHhcCcccccCCCCCCCeEEEe
Confidence            34679999999987643    4667777765 2  23367954 58999999999986            2678899999


Q ss_pred             CCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCc
Q 014594          153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP  230 (422)
Q Consensus       153 ~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NP  230 (422)
                      +|+++++..++++++++||+|++++|+|+.|...++..|++++.++.  ++++..|++.+++.+. .++++++++|||||
T Consensus       108 ~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~l~~~~~-~~~~~~~l~np~NP  186 (412)
T d1bw0a_         108 SGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKD-DKTKLLIVTNPSNP  186 (412)
T ss_dssp             SHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCC-TTEEEEEEESSCTT
T ss_pred             cccccchhhhhhhhhccccceeeeeccchhhhhhhhccCccccccccccccccchhhHHHHhhhh-cccccccccccccc
Confidence            99999999999999999999999999999999999999999999984  3567899999999887 78999999999999


Q ss_pred             cCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCchh-------hhhhcCCcEEEEccChhhhccccccceeeecCH
Q 014594          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRM-------EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (422)
Q Consensus       231 tG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~-------~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~  299 (422)
                      ||.+++.+++++|++.    +++||+||+|.++.+++...       .......++++++||||.++++|+|+||+++++
T Consensus       187 tG~~~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~G~RvG~~~~~~  266 (412)
T d1bw0a_         187 CGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVD  266 (412)
T ss_dssp             TCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEEC
T ss_pred             ccccchhhhccccccccccCCeeeechhhHHHhccCCCCCccccccccccccccccccccccCccCccCCCCcccccccc
Confidence            9999999999999985    99999999999988654221       112334568999999999999999999999853


Q ss_pred             ------HHHHHHHHhcCC-CCCcHHHHHHHHHHc-cC-ChHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEE
Q 014594          300 ------SIIEYLWRAKQP-YNVSVAAEVAACAAL-QN-PIYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCE  368 (422)
Q Consensus       300 ------~~~~~l~~~~~~-~~~~~~~~~aa~~~L-~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~  368 (422)
                            .++....+.... .+.+...+.++...+ .. .+|+. ++++++++|+.+.+.|.+..++. ..|.+|+|+|++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~l~~~~g~~~~~p~gg~~l~~~  346 (412)
T d1bw0a_         267 PHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSR  346 (412)
T ss_dssp             TTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEE
T ss_pred             hhhcchhhhhhhccccccccCCchhhhhhcccccccccccccccccchhHHHHHHHHHHHHHhcCceecCCCCceEEEEe
Confidence                  344444333222 344455555444444 33 36777 89999999999999998865454 468889999999


Q ss_pred             eC-----CCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          369 VT-----SGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       369 ~~-----~~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      ++     +..++.++++.|+ ++||.+.||..++.++|+||+++.++  ++|.+|+++|+
T Consensus       347 ~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~iRis~~~~~--e~l~eal~Rl~  404 (412)
T d1bw0a_         347 IDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPV--EVYREAVERIK  404 (412)
T ss_dssp             ECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCH--HHHHHHHHHHH
T ss_pred             CChhhcCCCCCHHHHHHHHHHhCCEEEEeccccCCCCeEEEEEcCCH--HHHHHHHHHHH
Confidence            86     2347888988887 67999999988888899999998754  66888888763

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6e-46  Score=358.92  Aligned_cols=328  Identities=24%  Similarity=0.358  Sum_probs=276.1

Q ss_pred             hHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 014594           83 FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELID  160 (422)
Q Consensus        83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~  160 (422)
                      +..++.+.|     +|+|+.|.+++++|+.+++++.+ +...+.|+++ |..+||+++|+++++++++|++|+|+++++.
T Consensus        18 ~~~la~~~~-----~I~ls~g~p~~~~p~~i~~al~~~l~~~~~Y~~~~G~~elr~aiA~~~~~~~~~Iiit~G~~~al~   92 (368)
T d1v2da_          18 MSGLAQRLG-----AVNLGQGFPSNPPPPFLLEAVRRALGRQDQYAPPAGLPALREALAEEFAVEPESVVVTSGATEALY   92 (368)
T ss_dssp             HHHHHHHHT-----CEECCCCSCSSCCCHHHHHHHHHHTTTSCSCCCTTCCHHHHHHHHHHHTSCGGGEEEESSHHHHHH
T ss_pred             HHHHhccCC-----CEEecCCCCCCCCCHHHHHHHHHHhhcccCCCCCcCCHHHHHHHHhhcccCCcceeeccchHHHHH
Confidence            344566654     59999999999999999999987 5555789665 7999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC---CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (422)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (422)
                      .++..++++||.|+++.|+|..+...++..|.+++.++.   .+++.+|++.+++.++ +++++++++|||||||.+++.
T Consensus        93 ~~~~~l~~~~d~v~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~NPtG~~~~~  171 (368)
T d1v2da_          93 VLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALT-PRTRALLLNTPMNPTGLVFGE  171 (368)
T ss_dssp             HHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCC-TTEEEEEEESSCTTTCCCCCH
T ss_pred             HHhhccccccccccccCCcchhhhhHHHhcCCccceeccccccccccCCHHHHHHhhc-cCceEEEEcCCCCcccccCCH
Confidence            999999999999999999999999999999999988874   3557899999999997 689999999999999999999


Q ss_pred             HHHHHHHcC----CCeEEEccCCccccCCCc-hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--
Q 014594          238 EDLLKILEM----PILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--  310 (422)
Q Consensus       238 e~l~~i~~~----~~~li~Deay~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--  310 (422)
                      +++++|++.    ++++|+||+|.++..... ........++.+++.|+||.++++|+|+||+++++++++.+.+...  
T Consensus       172 ~~l~~l~~~a~~~~i~ii~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sk~~~~~G~R~g~~~~~~~~~~~~~~~~~~~  251 (368)
T d1v2da_         172 RELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWT  251 (368)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCeeeechhhhhhcccccccccccccccccceeecccccccccccccccccccccccchhhhhhhcc
Confidence            998888764    999999999987664432 2333445678899999999999999999999999999988877665  


Q ss_pred             CCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCC
Q 014594          311 PYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMG  386 (422)
Q Consensus       311 ~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~g  386 (422)
                      ..+.+.+.|.++..++..   .+|++ .++.++++++++.+.|+++++....|++++|+|+++| +.+..+   .|.++|
T Consensus       252 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~p~g~~~~~~~l~-~~~~~~---ll~~~g  327 (368)
T d1v2da_         252 SFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELP-GWDAFR---LVEEAR  327 (368)
T ss_dssp             TSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEECCSBSSEEEEECT-TCCHHH---HHHHTC
T ss_pred             ccccccccccccccccccccchhhHHHHHHHHHHhhhhhhhhHHhcCcEEecCCceeEEEEeCC-ccHHHH---HHHhCC
Confidence            467788888888888764   45777 8888999999999999999865567788999999998 455543   466899


Q ss_pred             cEEEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          387 VMIRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       387 I~v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      |.+++|..+    ..++++|||++.++  |++.+++++|+
T Consensus       328 I~v~pg~~F~~~~~~~~~iRis~~~~~--e~i~~ai~rL~  365 (368)
T d1v2da_         328 VALIPASAFYLEDPPKDLFRFAFCKTE--EELHLALERLG  365 (368)
T ss_dssp             EECEEGGGGCSSSCCTTEEEEECCSCH--HHHHHHHHHHH
T ss_pred             EEEEechhhCCCCCCCCEEEEEecCCH--HHHHHHHHHHH
Confidence            999987653    34689999998643  66888888763

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=9.2e-46  Score=360.29  Aligned_cols=348  Identities=19%  Similarity=0.257  Sum_probs=277.9

Q ss_pred             HHhhccCCCCCCCchHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc-chHHHHHHHHHHc----
Q 014594           69 SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDP-ESRRLRAALAKDS----  142 (422)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~~-~~~~lr~~la~~~----  142 (422)
                      .++...+++ ++..+..++......+.++|+|+.|++++++|+.+++++.+. ....+||++ |..+||+++++++    
T Consensus         3 ~r~~~~~~~-~i~~l~~~a~~~~~~g~~vi~l~~G~p~~~~p~~~~~al~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~   81 (389)
T d2gb3a1           3 DRVLLTEES-PIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERIYENKPEVVYYSHSAGIWELREAFASYYKRRQ   81 (389)
T ss_dssp             HHHHSCCCC-TTGGGHHHHHHHHHTTCEEEECSSCCCCSCCCTHHHHHHHHTCCSSCCCCCTTCCHHHHHHHHHHHHHTS
T ss_pred             hhhhcCCCC-HHHHHHHHHHHHHHcCCCEEECCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCcCCHHHHHHHHHHHHHhc
Confidence            345555555 455555555555555678999999999999999999999874 345779665 8999999999986    


Q ss_pred             C--CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCC
Q 014594          143 G--LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKP  219 (422)
Q Consensus       143 ~--~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~  219 (422)
                      |  +++++|++|+|+++++..++.+++++||.|+++.|+|+.+...++..|+.++.++.+. ++..+.+.+...+. +++
T Consensus        82 g~~~~~~~I~it~G~~~~l~~~~~~l~~~gd~V~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  160 (389)
T d2gb3a1          82 RVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFIN-ERT  160 (389)
T ss_dssp             CCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCCCTTGGGGCC-TTE
T ss_pred             CCCcccceEEecccccccccccccccccCCCeEEEeCCCCccccccccccCccccccccccccccchhhhhhhhcc-cCc
Confidence            3  5789999999999999999999999999999999999999999999999999998543 34444555656555 789


Q ss_pred             eEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCchhh-hhhcCCcEEEEccChhhhcccccccee
Q 014594          220 KCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME-WVKKHDNLIVLRTFSKRAGLAGLRVGY  294 (422)
Q Consensus       220 ~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~~~~G~r~G~  294 (422)
                      ++++++|||||||.+++.+++++|++.    +++||+||+|.++.+++.... .....++++++.|+||.++++|+|+||
T Consensus       161 ~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~v~~s~sK~~~~~GlRiG~  240 (389)
T d2gb3a1         161 KGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGC  240 (389)
T ss_dssp             EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEE
T ss_pred             cEEEeCCCCccccccchHHHHHHHHhhcccCCEEEEEeccccccccccccccccccccccccccccccccccCcccceee
Confidence            999999999999999999999998875    999999999999887654322 233568899999999999999999999


Q ss_pred             eecCHH-HHHHHHHhc-CCCCCcHHHHHHHHHHccCC-hHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEe
Q 014594          295 GAFPLS-IIEYLWRAK-QPYNVSVAAEVAACAALQNP-IYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEV  369 (422)
Q Consensus       295 i~~~~~-~~~~l~~~~-~~~~~~~~~~~aa~~~L~~~-~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~  369 (422)
                      ++++.+ +.+...... ..++.+.+.+.++..++... .+++ +++.++++++.+.+.|+++++.. ..|++++|+|+++
T Consensus       241 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~~g~~~~~~l  320 (389)
T d2gb3a1         241 LITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITAEL  320 (389)
T ss_dssp             EECSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSBSSEEEEEC
T ss_pred             eeccchhHHHHHhhhhhccccccccccccccccccccchhcccccccccccchhhhhhhhhhccccccCCCceEEEEEeC
Confidence            999665 444443333 34667788888888888754 6777 89999999999999999998664 5688999999999


Q ss_pred             CCCCCHHHHHHHHHh------CCcEEEeCCCC-----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          370 TSGMDAKKLKDDLAK------MGVMIRHYNNK-----ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       370 ~~~~~~~~~~~~L~~------~gI~v~~~~~~-----~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      | ..+++++++.|++      +||.+.|+..+     ..++++||+++.++  +.|++++++|
T Consensus       321 p-~~~~~~~~~~ll~e~~l~~~~v~v~pg~~f~~~~~~~~~~iRis~~~~~--~~l~~a~~~L  380 (389)
T d2gb3a1         321 P-VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEK--DLLSRAIDVL  380 (389)
T ss_dssp             S-SSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCH--HHHHHHHHHH
T ss_pred             C-CCCHHHHHHHHHHhhhhhhCCEEEEeCcccccCCCCCCCEEEEEEcCCH--HHHHHHHHHH
Confidence            8 4588899988864      37788887652     23679999998654  5566666655

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.1e-45  Score=355.65  Aligned_cols=325  Identities=20%  Similarity=0.339  Sum_probs=275.4

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhc-CC-CCCCC-CCcchHHHHHHHHHHc----CC--CCC-CEEEeCCHHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIY-PDPESRRLRAALAKDS----GL--ESD-HILVGCGADELIDLIMR  164 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~y-~~~~~~~lr~~la~~~----~~--~~~-~i~~~~G~~~al~~~~~  164 (422)
                      .++|+|+.|.+++++|+.+++++.+ +. ..++| |..|..+||+++++++    |+  +++ +|++|+|+++++..+++
T Consensus        26 ~~~i~l~~G~Pd~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~  105 (382)
T d1u08a_          26 HQAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAIT  105 (382)
T ss_dssp             TTCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHH
T ss_pred             CCCEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHHHHHhCCCCCCCceEEeccchHHHHHHHHh
Confidence            3679999999999999999998876 32 23678 5558999999999986    43  455 69999999999999999


Q ss_pred             HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC-CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHH
Q 014594          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (422)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i  243 (422)
                      +++++||.|+++.|+|..+.......|+.++.++. ++++..|++++++.+. +++++++++|||||||.+++.+++++|
T Consensus       106 ~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~l~~P~NPtG~v~~~~~~~~l  184 (382)
T d1u08a_         106 ALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLS-ERTRLVILNTPHNPSATVWQQADFAAL  184 (382)
T ss_dssp             HHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             hcccccceEEEecccccchhhhhhhccccceecccccccccCCHHHHhhhhc-cCccEEEECCCCcccccccccccchhh
Confidence            99999999999999999999999999998888774 4567789999999887 689999999999999999999999998


Q ss_pred             HcC----CCeEEEccCCccccCCCc----hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC--CCC
Q 014594          244 LEM----PILVVLDEAYTEFSGLES----RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN  313 (422)
Q Consensus       244 ~~~----~~~li~Deay~~~~~~~~----~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~--~~~  313 (422)
                      ++.    +++++.|+.|..+.+.+.    ........++++++.|+||.++++|+|+||+++++++++.+.+...  .++
T Consensus       185 ~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~pG~RiG~~v~~~~~~~~~~~~~~~~~~~  264 (382)
T d1u08a_         185 WQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFS  264 (382)
T ss_dssp             HHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHHHHHHHTSS
T ss_pred             hhhhccccceeeeecchhhccccccccccccccccccCcEEEEeeccccccCCcccchhhhccchhHHHHHhhhcccccc
Confidence            774    889999999988765431    2222234678999999999999999999999999999998876654  478


Q ss_pred             CcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC--CCCHHHHHHHHH-hCCcE
Q 014594          314 VSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS--GMDAKKLKDDLA-KMGVM  388 (422)
Q Consensus       314 ~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~--~~~~~~~~~~L~-~~gI~  388 (422)
                      .+.+.|.++..++++ .+|.. +++.++++++.+.+.++..+.....|++|+|+|++++.  ..|..++++.|+ ++||.
T Consensus       265 ~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~p~gg~~~~~~~~~~~~~d~~e~~~~ll~e~gV~  344 (382)
T d1u08a_         265 VNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVA  344 (382)
T ss_dssp             CCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSSSCEECCCCBSSEEEEECTTTCCSCHHHHHHHHHHHSCEE
T ss_pred             cccccccccccccccchHHHHHHHHHHHhhhhhhhhhhccCCcEEecCCceEEEEEecCCCCCCCHHHHHHHHHHHCCEE
Confidence            899999999999875 57788 99999999999999998877555678899999999984  578899998876 78999


Q ss_pred             EEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          389 IRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       389 v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      +.||..+    ...+++|||++.++  |+|++++++|+
T Consensus       345 v~PG~~F~~~~~~~~~~Ris~~~~~--e~l~~al~RL~  380 (382)
T d1u08a_         345 AIPLSVFCADPFPHKLIRLCFAKKE--STLLAAAERLR  380 (382)
T ss_dssp             CEEGGGGCSSCCCSCEEEEECCSCH--HHHHHHHHHHT
T ss_pred             EEcchhhCCCCCCCCEEEEEEeCCH--HHHHHHHHHHh
Confidence            9998763    34579999998753  77999999985

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=100.00  E-value=9.9e-46  Score=360.61  Aligned_cols=336  Identities=15%  Similarity=0.242  Sum_probs=264.7

Q ss_pred             hHHHHHHhCCCCCCeEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCCcchHHHHHHHHHHc----C--CCCCCEEEeCC
Q 014594           83 FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDPESRRLRAALAKDS----G--LESDHILVGCG  154 (422)
Q Consensus        83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y~~~~~~~lr~~la~~~----~--~~~~~i~~~~G  154 (422)
                      .+.+..+....+.++|+|+.|+++|++|+.+++++.+ ++. .++|++ +..+||+++++++    |  +++++|++|+|
T Consensus        19 ~~~~~~~~~~~g~~vi~l~~g~pdf~~p~~v~~al~~~~~~~~~~Y~~-g~~~Lr~aia~~~~~~~g~~~~~~~I~vt~G   97 (394)
T d1c7na_          19 WDLMYSQNPEVGNEVVPLSVADMEFKNPPELIEGLKKYLDETVLGYTG-PTEEYKKTVKKWMKDRHQWDIQTDWIINTAG   97 (394)
T ss_dssp             HHHHHHHCTTCCTTCCCCCSSSCSSCCCHHHHHHHHHHHHHCCCSSBC-CCHHHHHHHHHHHHHHHCCCCCGGGEEEESS
T ss_pred             HHHHHHHhHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCCcCCCC-CCHHHHHHHHHHHHHhcCCCCCCcceEeecc
Confidence            4455555666678999999999999999999999986 332 367864 5679999999986    3  57889999999


Q ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC---CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCcc
Q 014594          155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADAVEREKPKCIFLTSPNNPD  231 (422)
Q Consensus       155 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt  231 (422)
                      +++++..+++++++|||.|+++.|.|..+....+..|++.+.++.   +..+.+|.+.++..+...+++++++|||||||
T Consensus        98 ~~~al~~~~~~~~~pgd~vi~~~p~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~P~NPT  177 (394)
T d1c7na_          98 VVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPV  177 (394)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTT
T ss_pred             chhhhhhhhccccccccccccccCcccchhhHHhhhhhcccccccccccccccchhhhhhhhhccccceEEEeccccccc
Confidence            999999999999999999999999999999999999999999873   34456899999988876789999999999999


Q ss_pred             CcCCCHHHHHHHHcC----CCeEEEccCCccccCCCch---hh--hhhcCCcEEEEccChhhhccccccceeeecCH-HH
Q 014594          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR---ME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SI  301 (422)
Q Consensus       232 G~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~---~~--~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~  301 (422)
                      |.+++.+++++|++.    +++||+||+|.++.+++..   ..  .....++++++.|+||.|+++|+|+||+++++ .+
T Consensus       178 G~v~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R~g~~~~~~~~i  257 (394)
T d1c7na_         178 GRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDI  257 (394)
T ss_dssp             TBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHH
T ss_pred             ceeccHHHhhhhhccccccceeEeccccccccccCCccccchhhhhcccccceeecccccccccccccccccccccChhh
Confidence            999999999999874    9999999999998865421   11  11235789999999999999999999999865 45


Q ss_pred             HHHHHHhcCC---CCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccC-CCCc-ccCCCceEEEEEeCC-CC
Q 014594          302 IEYLWRAKQP---YNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDV-PFLN-PYPSYSNFILCEVTS-GM  373 (422)
Q Consensus       302 ~~~l~~~~~~---~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~-~~~~-~~p~~~~f~~~~~~~-~~  373 (422)
                      .+.+.+....   .+.+...+.++...... .++.+ .++.++++++.+.+.++.. ..+. ..|++++|+|++++. +.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~g~~~~~~~~~~~~~  337 (394)
T d1c7na_         258 RERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRALKM  337 (394)
T ss_dssp             HHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGGCC
T ss_pred             hhhhhhhhhhccccccccccchhhhhhhcchhhhhcccccccchhhhhhhhhhhccccceeecCCCceeEEEEECCCCCC
Confidence            5655554432   22333344444444433 45666 8888888889888888753 2344 457788999999985 67


Q ss_pred             CHHHHHHHHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          374 DAKKLKDDLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       374 ~~~~~~~~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ++.++++.|+ ++||.+.||..+  ..++|+|||++.++  +.|++++++|
T Consensus       338 ~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~~~iRis~~~~~--e~i~eal~rl  386 (394)
T d1c7na_         338 DHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPS--SVIQESLERL  386 (394)
T ss_dssp             CHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCEEEEcchhhCCCCCCEEEEEEeCCH--HHHHHHHHHH
Confidence            8999999887 569999998874  34689999998754  4466666655

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-45  Score=358.52  Aligned_cols=325  Identities=20%  Similarity=0.295  Sum_probs=268.3

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhc-CCC---CCCCCC-cchHHHHHHHHHHc----CCC--C-CCEEEeCCHHHHHHH
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQ-LKF---PYIYPD-PESRRLRAALAKDS----GLE--S-DHILVGCGADELIDL  161 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~~---~~~y~~-~~~~~lr~~la~~~----~~~--~-~~i~~~~G~~~al~~  161 (422)
                      ..++|+|+.|++++++|+.+++++.+ +..   .++|++ .|..+||+++++++    |++  + ++|++|+|+++++..
T Consensus        24 ~~dvI~l~~G~p~~~~p~~v~~a~~~al~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~~I~it~G~~~al~~  103 (418)
T d1w7la_          24 EHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFT  103 (418)
T ss_dssp             TSCCEECCCCSCSSCCCHHHHHHHHHHTSSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHH
T ss_pred             CCCCEECCCCCCCCCCCHHHHHHHHHHHhCCCcccCCCCCcCCHHHHHHHHHHHHHHhCCCCCcccceeeccCcHHHHHH
Confidence            35789999999999999999999876 332   256855 48999999999986    543  3 589999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCC------------CCCCCCHHHHHHHhhcCCCeEEEEeCCCC
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK------------SDFSLNVELIADAVEREKPKCIFLTSPNN  229 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~------------~~~~~d~~~l~~~i~~~~~~~i~l~~p~N  229 (422)
                      ++++++++||.|+++.|+|+.|...+...|++++.++..            .++.+|.+++..... .+++++++++|||
T Consensus       104 ~~~~l~~~g~~vlv~~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~i~~~~p~N  182 (418)
T d1w7la_         104 AFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFT-SRTKALVLNTPNN  182 (418)
T ss_dssp             HHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECC---CCSEEGGGEECCHHHHHHHCC-TTEEEEEEESSCT
T ss_pred             HHHhhccCCceeeccccccchhHHHHHHcCCEeeccccccccccccccccccCcccchhhhhcccc-ccccceeccCcCC
Confidence            999999999999999999999999999999999888732            345678888888776 7889999999999


Q ss_pred             ccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhh-hcCCcEEEEccChhhhccccccceeeecCHHH
Q 014594          230 PDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (422)
Q Consensus       230 PtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~-~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~  301 (422)
                      |||.+++.+++++|++.    ++++|+||+|.++.+++.   .+..+ +..++++++.|+||.++++|+|+||+++++++
T Consensus       183 PtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pG~RvG~~v~~~~~  262 (418)
T d1w7la_         183 PLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHI  262 (418)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCGGGCCEEEECCHHH
T ss_pred             cccccccHHHHHHHHHHHHhcCCCchhhhhhHHhhcCCCCCCCHHHccccccccceecccCccccCCCCcccccccchhh
Confidence            99999999999999885    999999999999886542   22222 34578999999999999999999999999999


Q ss_pred             HHHHHHhcC--CCCCcHHHHHHHHHHccC--------ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeC
Q 014594          302 IEYLWRAKQ--PYNVSVAAEVAACAALQN--------PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT  370 (422)
Q Consensus       302 ~~~l~~~~~--~~~~~~~~~~aa~~~L~~--------~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~  370 (422)
                      ++.+.+...  .++.+.+.|.++..+|.+        .++.. .++.++++++.+.+.|++++.....|.+|+|+|++++
T Consensus       263 ~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~P~gg~f~~~~~~  342 (418)
T d1w7la_         263 MKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPLIPQGSYFLITDIS  342 (418)
T ss_dssp             HHHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHTTTSTTSHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSBSSEEEEECH
T ss_pred             hhhhccccccccccccchhhHHHHHHhhhccccccccccccccchhhhhhhhhhhhhhhhhcCCcccCCCceeEEEEECc
Confidence            999887664  467888888888888764        24666 8889999999999999998755567889999999985


Q ss_pred             C-------------CCCHHHHHHHHH-hCCcEEEeCCCC-------CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          371 S-------------GMDAKKLKDDLA-KMGVMIRHYNNK-------ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       371 ~-------------~~~~~~~~~~L~-~~gI~v~~~~~~-------~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +             ..+..++++.|+ ++||.+.||..+       ..++|||||++.++  +++.+++++|
T Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~~~~~iRis~~~~~--~~l~~a~~rl  412 (418)
T d1w7la_         343 DFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKDE--ATLQAMDEKL  412 (418)
T ss_dssp             HHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCCCH--HHHHHHHHHH
T ss_pred             ccccccchhccccccccHHHHHHHHHHHCCEEEEcchhhcCCCccCCCCCEEEEEEcCCH--HHHHHHHHHH
Confidence            2             123567887776 789999998753       34689999998644  5577777765

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.3e-44  Score=342.94  Aligned_cols=323  Identities=20%  Similarity=0.242  Sum_probs=252.4

Q ss_pred             eEEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCCcchHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHHHHHHhcC
Q 014594           97 IVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDPESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVLD  168 (422)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~y~~~~~~~lr~~la~~~----~--~~~~~i~~~~G~~~al~~~~~~l~~  168 (422)
                      +|+|+.|+++|++|+.+.+++.+ +.. .++|+..+..++|+++++++    |  +++++|++|+|+++++..++.++++
T Consensus         1 ~~~~~~~~~df~~p~~i~eal~~~~~~~~~~Y~~~~g~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~~l~~~~~~l~~   80 (361)
T d1d2fa_           1 LLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSE   80 (361)
T ss_dssp             CEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCCCSCCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSSC
T ss_pred             CcCcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEeCCHHHHHHHHhhhccc
Confidence            58999999999999999999987 333 25686654468999999875    4  5788999999999999999999999


Q ss_pred             CCCEEEEcCCCchhHHHHHHHcCCEEEEecC---CCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHc
Q 014594          169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE  245 (422)
Q Consensus       169 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~  245 (422)
                      +||+|++++|+|..|...++..|.+++.++.   ++++.+|++.+++.+.++++|+++++|||||||.+++.+++++|++
T Consensus        81 ~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~p~NPTG~~~s~~~~~~i~~  160 (361)
T d1d2fa_          81 TGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMAD  160 (361)
T ss_dssp             TTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHH
T ss_pred             cccccccccccccchhHHHHhhcceEEeecccccccccccccccchhhcccCCceeEEecccccccccccchhhhhhhhh
Confidence            9999999999999999999999999998874   3456699999999998789999999999999999999998888876


Q ss_pred             C----CCeEEEccCCccccCCCchh--hhhhcCCcEEEEccChhhhccccccceeeecCH-HHHHH-HHHhcCC---CCC
Q 014594          246 M----PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEY-LWRAKQP---YNV  314 (422)
Q Consensus       246 ~----~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~~-l~~~~~~---~~~  314 (422)
                      .    ++++|+||+|.+|.+++...  ......++++++.|+||.++++|+|+||++.+. ...+. +......   .++
T Consensus       161 ~~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~v~~~s~SK~~~~~g~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (361)
T d1d2fa_         161 LCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSP  240 (361)
T ss_dssp             HHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEEEECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSCCCSC
T ss_pred             hhhhhheeeeecccccccccccccccccccccccccccccccccccccccccceeeecchhHHHHHHhhhcccccccccc
Confidence            4    99999999999987654221  112246789999999999999999999987653 33333 2222222   345


Q ss_pred             cHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHcc-CCCCc-ccCCCceEEEEEeC-CCCCHHHHHHHHH-hCCcE
Q 014594          315 SVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKD-VPFLN-PYPSYSNFILCEVT-SGMDAKKLKDDLA-KMGVM  388 (422)
Q Consensus       315 ~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~-~~~~~-~~p~~~~f~~~~~~-~~~~~~~~~~~L~-~~gI~  388 (422)
                      +...+.++..++.. .++.+ .+..++++++.+.+.+.+ .+.+. ..|++++|+|++++ .+.++.++++.|+ ++||.
T Consensus       241 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~gg~~~~~~l~~~~~~~~~~~~~Ll~~~gv~  320 (361)
T d1d2fa_         241 SVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVA  320 (361)
T ss_dssp             CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCCCHHHHHHHHHHTTCEE
T ss_pred             hhhhHHHHHHHhhccchhhhcccccchhhHHHHHHHhhhhcccccccccCceeEEEEEccCCCCCHHHHHHHHHHhCCEE
Confidence            55566655555554 35666 777888888888777654 33333 35777899999985 4679999999987 66999


Q ss_pred             EEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          389 IRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       389 v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      +.||..++  .++++|||++.++  +++++++++|
T Consensus       321 v~pG~~F~~~~~~~vRis~~~~~--e~l~~al~rl  353 (361)
T d1d2fa_         321 IMPGYTYGEEGRGFVRLNAGCPR--SKLEKGVAGL  353 (361)
T ss_dssp             CEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred             EEeccccCCCCCCEEEEEEcCCH--HHHHHHHHHH
Confidence            99987743  4679999998644  4455555544

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=100.00  E-value=3.7e-43  Score=345.90  Aligned_cols=327  Identities=19%  Similarity=0.259  Sum_probs=258.4

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhc-CC------------CCCCCCCc-chHHHHHHHHHHc--------CCCCCCEEE
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQ-LK------------FPYIYPDP-ESRRLRAALAKDS--------GLESDHILV  151 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~------------~~~~y~~~-~~~~lr~~la~~~--------~~~~~~i~~  151 (422)
                      +..+|+|+.+||.+. .+.+.+.+.+ ..            ....|+++ |..+||++||+++        .+++++|++
T Consensus        35 p~G~i~l~~aen~l~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~~~~e~Ivi  113 (428)
T d1iaya_          35 PNGVIQMGLAENQLC-LDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVM  113 (428)
T ss_dssp             TTSBEECSSCCCCSS-HHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEE
T ss_pred             CCceEEeecccCccc-hHHHHHHHHhCCchhhhHhHhhhCHHhccCcCCcchHHHHHHHHHHHHHHhCCCCCCChhhEEE
Confidence            456999999999874 3555555543 10            11358665 8999999999986        257889999


Q ss_pred             eCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH-cCCEEEEecCC--CCCCCCHHHHHHHhh-----cCCCeEEE
Q 014594          152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVPRK--SDFSLNVELIADAVE-----REKPKCIF  223 (422)
Q Consensus       152 ~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~v~~~--~~~~~d~~~l~~~i~-----~~~~~~i~  223 (422)
                      |+|+++++..++.+++++||+|+++.|+|..+...+.. .|++++.++.+  ++|.+|++.++..+.     ..++++++
T Consensus       114 t~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~  193 (428)
T d1iaya_         114 AGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLI  193 (428)
T ss_dssp             EEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             cCCHHHHHHHHHHHhCCCCCEEEEccCCchHHHHHHHHhcCCeEEEeecccccccccccccccchhhhhhccCCCceEEE
Confidence            99999999999999999999999999999988876664 58999999853  568899998876542     25788999


Q ss_pred             EeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCch----hhh-------hhcCCcEEEEccChhhhccc
Q 014594          224 LTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR----MEW-------VKKHDNLIVLRTFSKRAGLA  288 (422)
Q Consensus       224 l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~----~~~-------~~~~~~~i~~~S~SK~~~~~  288 (422)
                      ++|||||||.+++.+++++|++.    +++||+||+|.++.+++..    ...       ....+++++++||||.|+++
T Consensus       194 l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~  273 (428)
T d1iaya_         194 LTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLP  273 (428)
T ss_dssp             EESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCG
T ss_pred             EccCCCcccccccccccchhheeeccCcEEEEecccccccccCcccccccccccchhhccccccceEEEEecCCCcccCC
Confidence            99999999999999998888764    9999999999998865421    111       12457899999999999999


Q ss_pred             cccceeeec-CHHHHHHHHHhcCCCCCcHHHHHHHHHHccCCh----HHH-HHHHHHHHHHHHHHHHccCCCCcccCCCc
Q 014594          289 GLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPI----YLE-VKEALIKERERLFKLLKDVPFLNPYPSYS  362 (422)
Q Consensus       289 G~r~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~aa~~~L~~~~----~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~  362 (422)
                      |+|+||+++ ++.+.+.+.........+...+.++.+.+.+.+    +++ .++.++++++.+.+.|+..++....|++|
T Consensus       274 GlRiG~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~l~~r~~~~~~~L~~~gi~~~~p~gg  353 (428)
T d1iaya_         274 GFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAG  353 (428)
T ss_dssp             GGCEEEEEESCHHHHHHHHHHHTTSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCSSS
T ss_pred             CcccccccccccchhhhhhhhhcccccccccccchhhhhhhhccccccccccccccchhHHHHHHHHHhCCCEEecCCcc
Confidence            999999998 556777777776667788888888888887754    444 77788899999999999877544567889


Q ss_pred             eEEEEEeCCCC------CHHHHHHHHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhhC
Q 014594          363 NFILCEVTSGM------DAKKLKDDLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHLY  422 (422)
Q Consensus       363 ~f~~~~~~~~~------~~~~~~~~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l~  422 (422)
                      +|+|++++...      +..++++.|+ ++||.+.||..+  ..++|+||+|+..++ +.|+++++||+
T Consensus       354 ~f~w~~l~~~~~~~~~~~~~~l~~~Ll~~~gV~v~PG~~F~~~~~g~~Ris~a~~~~-~~l~~al~Rl~  421 (428)
T d1iaya_         354 LFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDD-GTVDIALARIR  421 (428)
T ss_dssp             SEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCH-HHHHHHHHHHH
T ss_pred             eEEEEECccccccCCCCCHHHHHHHHHHhCCEEEEcchhcCCCCCCEEEEEeCCCCH-HHHHHHHHHHH
Confidence            99999997421      3456777776 679999998874  347899999986543 56888888763

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=100.00  E-value=2.1e-43  Score=347.89  Aligned_cols=326  Identities=18%  Similarity=0.243  Sum_probs=256.8

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhc-CC-------------CCCCCCCc-chHHHHHHHHHHc--------CCCCCCEE
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQ-LK-------------FPYIYPDP-ESRRLRAALAKDS--------GLESDHIL  150 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~-------------~~~~y~~~-~~~~lr~~la~~~--------~~~~~~i~  150 (422)
                      +..+|+|+.+||.+. .+.+.+.+.+ ..             ....|+++ |..+||+++|+++        .+++++|+
T Consensus        35 p~G~i~l~~~en~l~-~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~~~pe~I~  113 (431)
T d1m7ya_          35 TNGIIQMGLAENQLC-FDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLV  113 (431)
T ss_dssp             TTSBEECSSCCCCSC-HHHHHHHHHHCCTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEE
T ss_pred             CCcEEEeeccccccc-HHHHHHHHHhCCchhhhhhhhhhccHHhcCCcCCcCcHHHHHHHHHHHHHHhCCCCCCCcceEE
Confidence            345899999999884 3555555542 10             11358766 8999999999986        25788999


Q ss_pred             EeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH-cCCEEEEecCC--CCCCCCHHHHHHHhhc-----CCCeEE
Q 014594          151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKCI  222 (422)
Q Consensus       151 ~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~v~~~--~~~~~d~~~l~~~i~~-----~~~~~i  222 (422)
                      +|+|+++++..+++++++|||+|+++.|+|+.+...++. .|++++.++.+  ++|.+|++.+++.+.+     .+++++
T Consensus       114 it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i  193 (431)
T d1m7ya_         114 LTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGV  193 (431)
T ss_dssp             EEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred             ECCCHHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHhcCceeccccccchhcccccHHHhhhhhhhhhhccCcceEE
Confidence            999999999999999999999999999999988777764 68999999853  4688999999887743     468899


Q ss_pred             EEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCch----hhhh---------hcCCcEEEEccChhhh
Q 014594          223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR----MEWV---------KKHDNLIVLRTFSKRA  285 (422)
Q Consensus       223 ~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~----~~~~---------~~~~~~i~~~S~SK~~  285 (422)
                      +++|||||||.+++.+++++|++.    +++||+||+|.++.+++..    ....         ...+++++++||||.|
T Consensus       194 ~~~nP~NPtG~~~s~~~l~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~  273 (431)
T d1m7ya_         194 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDL  273 (431)
T ss_dssp             EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHTTTTTCSSSSSGGGGEEEEEESSSSS
T ss_pred             EecCccccccccccccccccccccccccCcceeecccccccccCCCCCCCHHHHhhhcccccccccCceEEEEecCcccc
Confidence            999999999999999999999875    9999999999998765421    1111         1246899999999999


Q ss_pred             ccccccceeeecCHHHHHHHHH-hcCCCCCcHHHHHHHHHHccCC----hHHH-HHHHHHHHHHHHHHHHccCCCCcccC
Q 014594          286 GLAGLRVGYGAFPLSIIEYLWR-AKQPYNVSVAAEVAACAALQNP----IYLE-VKEALIKERERLFKLLKDVPFLNPYP  359 (422)
Q Consensus       286 ~~~G~r~G~i~~~~~~~~~l~~-~~~~~~~~~~~~~aa~~~L~~~----~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p  359 (422)
                      |++|+|+||++++++++..... .......+...+.++.+.+.+.    +|.+ .+++++++++.+.+.|++.+.....|
T Consensus       274 ~~~G~RiG~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~~~~p  353 (431)
T d1m7ya_         274 GLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNG  353 (431)
T ss_dssp             CCGGGCEEEEEESCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEECCC
T ss_pred             cCCCCccceeccchhhhHHHHHHHhccccccccccchhhhhhccchhhhhhhhhhhhhhhhhhhhhhhhhhcCCcEEecC
Confidence            9999999999998887655444 4444567777777777777663    4555 88889999999999999877544567


Q ss_pred             CCceEEEEEeCCC------CCHHHHHHHHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          360 SYSNFILCEVTSG------MDAKKLKDDLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       360 ~~~~f~~~~~~~~------~~~~~~~~~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .+|+|+|++++..      .+..+++++|. ++||.+.||..+  ..++|+||+++..++ +.|.+++++|
T Consensus       354 ~gg~f~w~~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~F~~~~~~~~Ri~~a~~~e-~~l~~al~rL  423 (431)
T d1m7ya_         354 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPE-RTLDLAMQRL  423 (431)
T ss_dssp             CSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCH-HHHHHHHHHH
T ss_pred             CceeEEEEECccccccCcccCHHHHHHHHHHHCCEEEEeccccCCCCCCEEEEEeCcCCH-HHHHHHHHHH
Confidence            7899999999742      23456777776 779999998774  347899999986543 6688888776

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=7.6e-43  Score=342.99  Aligned_cols=325  Identities=19%  Similarity=0.238  Sum_probs=257.2

Q ss_pred             CCCeEEcCCCCCCCC--CCHHHHHHHhcC-----CCCCCCCCc-chHHHHHHHHHHc----C---CCCCCEEEeCCHHHH
Q 014594           94 PEDIVKIDANENPYG--PPPEVREALGQL-----KFPYIYPDP-ESRRLRAALAKDS----G---LESDHILVGCGADEL  158 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~--~~~~v~~al~~~-----~~~~~y~~~-~~~~lr~~la~~~----~---~~~~~i~~~~G~~~a  158 (422)
                      ++++|+|+.|.++..  |.+.+.+++.++     .....|++. |..+||++|++++    |   +++++|++|+|++++
T Consensus        37 ~~~~I~l~~G~Pd~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~~I~it~G~~~a  116 (420)
T d1vp4a_          37 DKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQA  116 (420)
T ss_dssp             STTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHH
T ss_pred             CCCcEecCCcCCCCccCCHHHHHHHHHHHHhhCCccccCCCCCcCCHHHHHHHHHHHHHHhCCCCCCHHHeEeccchhhh
Confidence            467999999987543  344555555442     112568554 8999999999986    2   578999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-------CC-CeEEEEeCCCCc
Q 014594          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-------EK-PKCIFLTSPNNP  230 (422)
Q Consensus       159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------~~-~~~i~l~~p~NP  230 (422)
                      +.+++.+++++||.|+++.|+|..|...++..|++++.++.++ .++|++.++..+.+       .+ .+++++++||||
T Consensus       117 l~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~NP  195 (420)
T d1vp4a_         117 LDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLED-DGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNP  195 (420)
T ss_dssp             HHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEET-TEECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTT
T ss_pred             HHHHHHhhhccccccccccccccchhHHHHHHhhhcccccccc-cccccchhhhhhhhhHHHhhccccceeeEecCCCCc
Confidence            9999999999999999999999999999999999999999654 36788877665421       22 335556799999


Q ss_pred             cCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHH
Q 014594          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (422)
Q Consensus       231 tG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~  303 (422)
                      ||.+++.+++++|++.    ++++|+||+|.++.+++.   ........+++++++|+||.+ ++|+|+||+++++++++
T Consensus       196 tG~~~s~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~s~sk~~-~~G~RiG~~~~~~~~i~  274 (420)
T d1vp4a_         196 AGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVL-APGLRIGMVAGSKEFIR  274 (420)
T ss_dssp             TCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTT-CGGGCEEEEECCHHHHH
T ss_pred             cchhhhhhhhhhhhhhhhcccccccccchhhhccccCcccccccccccccceeEEecccccc-ccccccccccccchhhh
Confidence            9999999999998875    999999999999886542   233445678899999999976 59999999999999999


Q ss_pred             HHHHhcCC--CCCcHHHHHHHHHHccCChH---HH-HHHHHHHHHHHHHHHHcc----CCCCc-ccCCCceEEEEEeCCC
Q 014594          304 YLWRAKQP--YNVSVAAEVAACAALQNPIY---LE-VKEALIKERERLFKLLKD----VPFLN-PYPSYSNFILCEVTSG  372 (422)
Q Consensus       304 ~l~~~~~~--~~~~~~~~~aa~~~L~~~~~---~~-~~~~~~~~~~~l~~~L~~----~~~~~-~~p~~~~f~~~~~~~~  372 (422)
                      .+.+....  .+.+...|.++..++.+..+   ++ .++.++++++.+.+.|++    ++++. ..|++|+|+|+++|++
T Consensus       275 ~l~~~~~~~~~~~~~~~q~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~g~~~~~p~gg~f~~~~~~~~  354 (420)
T d1vp4a_         275 KIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEG  354 (420)
T ss_dssp             HHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTT
T ss_pred             hhhhhhhhccccCchhhhhhhhhhcccccccccchhHHHHhhhhcccchhhhhhhhccCCCcEEecCCceEEEEEECCCC
Confidence            99877665  56778888888888876543   34 667788888888777765    33444 3577889999999988


Q ss_pred             CCHHHHHHHHHhCCcEEEeCCCCC----CCCeEEEEecChhhHHHHHHHHhhh
Q 014594          373 MDAKKLKDDLAKMGVMIRHYNNKE----LKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       373 ~~~~~~~~~L~~~gI~v~~~~~~~----~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .++.++.+.|+++||.+.||..++    ..+++|||++...+ ++|.+++++|
T Consensus       355 ~d~~~~~~~l~~~gV~v~PG~~F~~~~~~~~~iRls~~~~~~-e~l~~a~~rL  406 (420)
T d1vp4a_         355 FDTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLPPD-EKIVEGIKRL  406 (420)
T ss_dssp             CCTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSSSCH-HHHHHHHHHH
T ss_pred             CCHHHHHHHHHHCCeEEEechhhCCCCCCCCEEEEEeCcCCH-HHHHHHHHHH
Confidence            889999999999999999987632    35799999986543 6677777765

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=100.00  E-value=3.6e-42  Score=336.36  Aligned_cols=324  Identities=20%  Similarity=0.281  Sum_probs=253.3

Q ss_pred             CCeEEcCCCCCCCC--CCHHHHHHHhcC-C----CCCCCCCc-chHHHHHHHHHHc------CCCCCCEEEeCCHHHHHH
Q 014594           95 EDIVKIDANENPYG--PPPEVREALGQL-K----FPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGADELID  160 (422)
Q Consensus        95 ~~~i~l~~~~~~~~--~~~~v~~al~~~-~----~~~~y~~~-~~~~lr~~la~~~------~~~~~~i~~~~G~~~al~  160 (422)
                      +++|+|+.|.++..  |.+.+.+++.+. .    ....|++. |..+||+++++++      .+++++|++|+|+++++.
T Consensus        29 ~~~i~l~~G~P~~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aia~~l~~~~g~~~~~~~I~it~G~~~al~  108 (403)
T d1wsta1          29 SDVISLAGGLPAPETFPVETIKKIAVEVLEEHADKALQYGTTKGFTPLRLALARWMEKRYDIPMSKVEIMTVAGSQQALD  108 (403)
T ss_dssp             SSCEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCSSCCHHHHHHHHHHHHHHHCCCCTTCEEEEESSHHHHHH
T ss_pred             CCcEECCCCCCCccccCHHHHHHHHHHHHHhCcccccCCCCCcCCHHHHHHHHHHHHHHhCCCCChHHeeecccchHHHH
Confidence            56899999876542  334555555542 1    12568654 8999999999996      368899999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHH----HHhh--cCCCeEEEEeCCCCccCcC
Q 014594          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIA----DAVE--REKPKCIFLTSPNNPDGSI  234 (422)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~----~~i~--~~~~~~i~l~~p~NPtG~~  234 (422)
                      .++.+++++||.|+++.|+|..|...+...|++++.++.+.. ..+...+.    ....  +..+.++++++||||||.+
T Consensus       109 ~~~~~l~~~gd~v~~~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~  187 (403)
T d1wsta1         109 LIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIPLDDK-GMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVT  187 (403)
T ss_dssp             HHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-EECHHHHHHHHHHHHHTTCCCCEEEECCSSCTTTCCC
T ss_pred             HHHHHHhhcCCccccCCCcchhhhHHHhhccccceeEeeccc-CCccccccccchhhhhccccccccccccccCCCCCcc
Confidence            999999999999999999999999999999999999996433 22322222    2221  1345577778999999999


Q ss_pred             CCHHHHHHHHcC----CCeEEEccCCccccCCCc---hhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHH
Q 014594          235 INDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR  307 (422)
Q Consensus       235 ~~~e~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~  307 (422)
                      ++.+++++|++.    +++||+||+|.++.+++.   .+...+..+++++++||||.++ +|+|+||+++++++++.+..
T Consensus       188 ~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~G~RiG~~i~~~~~i~~~~~  266 (403)
T d1wsta1         188 MSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSKILA-PGFRIGWVAAHPHLIRKMEI  266 (403)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGCSSSCEEEEEESTTTTC-GGGCCEEEEECHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhcCceeccccchhheecCCCCCCcccccCCCCcEEEEccccceec-CcccccccccchHHHHHHHH
Confidence            999999998774    999999999999886542   3344456789999999999986 99999999999999998876


Q ss_pred             hcCC--CCCcHHHHHHHHHHccCC---hHHH-HHHHHHHHHHHHHHHHccC--CCCc-ccCCCceEEEEEeCCCCCHHHH
Q 014594          308 AKQP--YNVSVAAEVAACAALQNP---IYLE-VKEALIKERERLFKLLKDV--PFLN-PYPSYSNFILCEVTSGMDAKKL  378 (422)
Q Consensus       308 ~~~~--~~~~~~~~~aa~~~L~~~---~~~~-~~~~~~~~~~~l~~~L~~~--~~~~-~~p~~~~f~~~~~~~~~~~~~~  378 (422)
                      ....  ...+...|.+..+++...   .+++ .++.++++++.+.+.|.+.  .++. ..|.+|+|+|+++|++.+.+.+
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~p~gg~~~~~~~~~~~~~~~~  346 (403)
T d1wsta1         267 AKQSIDLCTNTFGQAIAWKYVENGYLDEHIPKIIEFYKPRRDAMLEALEEYMPEGVEWTKPEGGMFVRVTLPEGIDTKLM  346 (403)
T ss_dssp             HHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSBSSEEEEECCTTCCTTTT
T ss_pred             HHhhhccccccchhhhHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhccCCeEEeCCCceeEEEEECCCCCCHHHH
Confidence            5543  566777777777776654   4455 7888889999999999874  2233 4688899999999998899999


Q ss_pred             HHHHHhCCcEEEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014594          379 KDDLAKMGVMIRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       379 ~~~L~~~gI~v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      .+.|+++||.++||+.+    ..++++||+++...+ +++.+++++|
T Consensus       347 ~~~l~~~gV~v~pg~~f~~~~~~~~~iRi~~~~~~~-~~l~~al~rl  392 (403)
T d1wsta1         347 MERAVAKGVAYVPGEAFFVHRDKKNTMRLNFTYVPE-ETIREGVRRL  392 (403)
T ss_dssp             HHHHHHTTEECEEGGGGSTTCCCCSEEEEECSSSCH-HHHHHHHHHH
T ss_pred             HHHHHHCCEEEEechhhcCCCCCCCEEEEEecCCCH-HHHHHHHHHH
Confidence            99999999999998753    346899999985432 5677776665

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=100.00  E-value=1e-39  Score=318.56  Aligned_cols=330  Identities=15%  Similarity=0.156  Sum_probs=253.5

Q ss_pred             CCCchHHHHHHhCCC-CCCeEEcCCCC---CC--CCCCHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHHHcC-----
Q 014594           79 PILPFEVLSIQLGRK-PEDIVKIDANE---NP--YGPPPEVREALGQL---KFPYIY-PDPESRRLRAALAKDSG-----  143 (422)
Q Consensus        79 ~~~~~~~~~~~~~~~-~~~~i~l~~~~---~~--~~~~~~v~~al~~~---~~~~~y-~~~~~~~lr~~la~~~~-----  143 (422)
                      |.+++..+..++..+ .++.|+|+.|.   +.  .+..+.|++++..+   ...+.| |..|..+||+++++++.     
T Consensus        11 p~d~i~~~~~~~~~d~~~~~InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~   90 (401)
T d7aata_          11 PPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSE   90 (401)
T ss_dssp             CCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCH
T ss_pred             CCChHHHHHHHHhCCCCCCcEEccCCCCcCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhccCCc
Confidence            455555565554433 34579999993   22  23458888887652   233578 55699999999999862     


Q ss_pred             -CCCCCEEEeCCH-----HHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhh
Q 014594          144 -LESDHILVGCGA-----DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVE  215 (422)
Q Consensus       144 -~~~~~i~~~~G~-----~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~  215 (422)
                       +++++|+.+.|+     .+++..+++++++|||+|++++|+|+.|...++.+|++++.+|.  ++++..|++.+++.+.
T Consensus        91 ~~~~~~i~~~~~~~~~g~~~~~~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (401)
T d7aata_          91 AFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDIS  170 (401)
T ss_dssp             HHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHT
T ss_pred             ccCcCceEEeccchHHHHHHHHHHhhHhhcCCCceEEEecCCCcchhhHHHHcCCeEEEEeccccccccccHHHHHHHHh
Confidence             256677665543     35788888889999999999999999999999999999999994  4567789999888774


Q ss_pred             --cCCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCchh------hhhhcCCcEEEEccChh
Q 014594          216 --REKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRM------EWVKKHDNLIVLRTFSK  283 (422)
Q Consensus       216 --~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~------~~~~~~~~~i~~~S~SK  283 (422)
                        .++++++++++||||||.+++.+++++|++.    ++++|+||+|.++.+++...      ......++++++.|+||
T Consensus       171 ~~~~~~~~iii~~p~NPTG~~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~sk  250 (401)
T d7aata_         171 KIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAK  250 (401)
T ss_dssp             TSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTT
T ss_pred             cCCCceEEEEecCCCCCccccCCHHHHHHHHHHHhcceEEEEEeccchhhhcCCcccchhhhhhhhhhhcccceeEeccc
Confidence              2578999999999999999999999999875    99999999999999765321      12234577889999999


Q ss_pred             hhccccccceeeecCHHHHHHHHHhc---------CCCCCcHHHHHHHHHHccCCh-------HHH-HHHHHHHHHHHHH
Q 014594          284 RAGLAGLRVGYGAFPLSIIEYLWRAK---------QPYNVSVAAEVAACAALQNPI-------YLE-VKEALIKERERLF  346 (422)
Q Consensus       284 ~~~~~G~r~G~i~~~~~~~~~l~~~~---------~~~~~~~~~~~aa~~~L~~~~-------~~~-~~~~~~~~~~~l~  346 (422)
                      .++++|+|+||++++.++++...+..         ...+.+.+.|.++..++.++.       +.+ .+++++++|+.+.
T Consensus       251 ~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~  330 (401)
T d7aata_         251 NMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLV  330 (401)
T ss_dssp             TSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceeeccccceeecchHHHHHHHHHHHHHHHHhhccccccchHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999877666544322         125677888998988888753       233 6778889999999


Q ss_pred             HHHccCCCC----cccCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHh
Q 014594          347 KLLKDVPFL----NPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLM  419 (422)
Q Consensus       347 ~~L~~~~~~----~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~  419 (422)
                      +.|++++..    .+.|++|+|+|+.+    +. +++++|+ ++||.+.+|.        |||++  ++++++.+.++|+
T Consensus       331 ~~L~~~~~~~~~~~~~~~~G~F~~~~l----s~-e~~~~L~~e~gV~~~pg~--------Ris~a~~~~~~i~~la~ai~  397 (401)
T d7aata_         331 SNLKKEGSSHNWQHITDQIGMFCFTGL----KP-EQVERLTKEFSIYMTKDG--------RISVAGVASSNVGYLAHAIH  397 (401)
T ss_dssp             HHHHHTTCCSCCHHHHHCCSSEEECCC----CH-HHHHHHHHHHCEECCTTC--------EEEGGGCCTTTHHHHHHHHH
T ss_pred             HHHHHhCCCCCcceECCCCeEEEecCC----CH-HHHHHHHHhCCEEECCCc--------EEEeccCCHHHHHHHHHHHH
Confidence            999987531    24688999999766    33 4566665 8899999875        99986  4566788999988


Q ss_pred             hh
Q 014594          420 HL  421 (422)
Q Consensus       420 ~l  421 (422)
                      ++
T Consensus       398 ~v  399 (401)
T d7aata_         398 QV  399 (401)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.3e-39  Score=312.07  Aligned_cols=336  Identities=17%  Similarity=0.161  Sum_probs=249.1

Q ss_pred             hccCCCCCCCchHHHHHHhCC-CCCCeEEcCCCC---CC--CCCCHHHHHHHhcC----CCCCCC-CCcchHHHHHHHHH
Q 014594           72 RKLKPYQPILPFEVLSIQLGR-KPEDIVKIDANE---NP--YGPPPEVREALGQL----KFPYIY-PDPESRRLRAALAK  140 (422)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~---~~--~~~~~~v~~al~~~----~~~~~y-~~~~~~~lr~~la~  140 (422)
                      .++.++ |.+++..+..++.. +..+.|+|+.|.   +.  .+..+.|.+|...+    ...+.| |..|..+||+++++
T Consensus         3 ~~~~~~-~~dpi~~~~~~~~~d~~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lR~aia~   81 (397)
T d3tata_           3 QKVDAY-AGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAP   81 (397)
T ss_dssp             CCCCCC-CCCTTTTHHHHHHHSCCSSCEECSCCSCCCTTSSCCCCHHHHHHHHHHTTSCCSSBCCCCTTCCHHHHHHHHH
T ss_pred             ccCCCC-CCCcHHHHHHHHhcCCCCCcEEccCCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCcccCHHHHHHHHH
Confidence            445555 45565555554432 234569999983   22  33457888886642    123568 66799999999999


Q ss_pred             HcC------CCCCCEEEeCCHHHH----HHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHH
Q 014594          141 DSG------LESDHILVGCGADEL----IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVE  208 (422)
Q Consensus       141 ~~~------~~~~~i~~~~G~~~a----l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~  208 (422)
                      ++.      +++++|+++.|++++    +.+++..+++|||.|++++|+|+.|...++..|++++.+|.  +.++..|.+
T Consensus        82 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~~~~~~  161 (397)
T d3tata_          82 LLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFN  161 (397)
T ss_dssp             HHTCSSCHHHHTTCEEECCBSHHHHHHHHHHHHHHHHCSSCCCEECSSCCTTHHHHHHTTTCCCEECCCCCTTTSSCCHH
T ss_pred             HHhhccCCcCCcCcEEEecCchhHHHHHHHHHHhhhcCCCCcceecccCccccHHHHHHcCCEEEEEecchhhccccchH
Confidence            872      357788887776654    56666667899999999999999999999999999999995  345677888


Q ss_pred             HHHHHhhc--CCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCch----hh-hhhcCCcEEE
Q 014594          209 LIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR----ME-WVKKHDNLIV  277 (422)
Q Consensus       209 ~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~----~~-~~~~~~~~i~  277 (422)
                      .+.+.+..  .+++++++++||||||.+++.+++++|++.    ++++|+||+|.++.+++..    .. .....+++++
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~i~  241 (397)
T d3tata_         162 DLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALV  241 (397)
T ss_dssp             HHHHHHTTCCSSCCCEECSSSCSSSCCCCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHHHHHHHHHHHHTTTCCCEE
T ss_pred             HHHHHhhhcccccEEEEecCCCCCCCeeCCHHHHHHHHHHHhhcCeeEEeehhhhhhccCCcccchhhhhhhhcCCceEE
Confidence            88877642  567888889999999999999999999875    9999999999999876421    11 2234678899


Q ss_pred             EccChhhhccccccceeeecCHHHHHHHHH-------hcC--CCCCcHHHHHHHHHHccCChH-------HH-HHHHHHH
Q 014594          278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWR-------AKQ--PYNVSVAAEVAACAALQNPIY-------LE-VKEALIK  340 (422)
Q Consensus       278 ~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~-------~~~--~~~~~~~~~~aa~~~L~~~~~-------~~-~~~~~~~  340 (422)
                      +.||||.++++|+|+||++++...++...+       ...  ..+.+...|.++..++.+.++       ++ .++++++
T Consensus       242 ~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (397)
T d3tata_         242 SNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRILA  321 (397)
T ss_dssp             CBCCHHHHTBTTTCCBCCEEECSSTTHHHHHHHHHHHHTTTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred             EecCcccccccCccccccccchhHHHHHHHHHHHHHHHhhcccccccHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999986544333222       222  245677888888888887532       23 5667777


Q ss_pred             HHHHHHHHHccCC----CCcccCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec--ChhhHHH
Q 014594          341 ERERLFKLLKDVP----FLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG--KPEHTDA  413 (422)
Q Consensus       341 ~~~~l~~~L~~~~----~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~  413 (422)
                      +++.+.+.|+.++    +..+.+.+|+|+|+.++     .++++.|. ++||.+.++.        |||++  .++++|.
T Consensus       322 ~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls-----~e~~~~L~~e~~V~l~~g~--------Ri~~a~~~~~~i~~  388 (397)
T d3tata_         322 MRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLS-----AAQVDRLREEFGVYLIASG--------RMCVAGLNTANVQR  388 (397)
T ss_dssp             HHHHHHHTTTTTCTTSCTTHHHHCCSSBCCCCCC-----HHHHHHHTTTTCEECCSSS--------CCBTTSCCTTTHHH
T ss_pred             HHHHHHHHHHHhCCCCceEEEcCCCceEEecCcC-----HHHHHHHHHhCCEEeCCCC--------EEEeccCCHHHHHH
Confidence            8888888887753    22346789999998763     35567776 7899999875        99986  4666789


Q ss_pred             HHHHHhhh
Q 014594          414 LMECLMHL  421 (422)
Q Consensus       414 l~~al~~l  421 (422)
                      +.++++.+
T Consensus       389 ~~~ai~~v  396 (397)
T d3tata_         389 VAKAFAAV  396 (397)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99988764

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=100.00  E-value=1.6e-37  Score=303.91  Aligned_cols=329  Identities=16%  Similarity=0.182  Sum_probs=243.6

Q ss_pred             CCchHHHHHHhCCCC-CCeEEcCCCC---CCC--CCCHHHHHHHhcC----CCCCCC-CCcchHHHHHHHHHHc-C----
Q 014594           80 ILPFEVLSIQLGRKP-EDIVKIDANE---NPY--GPPPEVREALGQL----KFPYIY-PDPESRRLRAALAKDS-G----  143 (422)
Q Consensus        80 ~~~~~~~~~~~~~~~-~~~i~l~~~~---~~~--~~~~~v~~al~~~----~~~~~y-~~~~~~~lr~~la~~~-~----  143 (422)
                      .+++..++.+++.++ ++.|+|+.|.   +..  +..+.|+++...+    ...+.| |..|..+||+++++++ +    
T Consensus        13 ~d~i~~~~~~~~~d~~~~kInL~iG~~~d~~g~~~~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~~~~~~   92 (412)
T d1yaaa_          13 PDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSD   92 (412)
T ss_dssp             CCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCH
T ss_pred             CChHHHHHHHHhcCCCCCcEEeecCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCCCCCHHHHHHHHHHHhcccCc
Confidence            345556777666543 4479999982   222  3347888775442    234678 5569999999999986 2    


Q ss_pred             -CCCCCEE--EeCCHHHHHHHHH--HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhc
Q 014594          144 -LESDHIL--VGCGADELIDLIM--RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER  216 (422)
Q Consensus       144 -~~~~~i~--~~~G~~~al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~  216 (422)
                       ..++.++  .+.|+..++..++  ..++++||.|++++|+|+.|...++..|++++.++.  +.++..|.+.+++.+..
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~Vlip~P~~~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (412)
T d1yaaa_          93 ALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQK  172 (412)
T ss_dssp             HHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHH
T ss_pred             cccccceeEEecccchhHHHHHHHHHhccCCCCEEecccccCchhHHHHHHcCCceecccccccccccccchhhhccccc
Confidence             1233333  3345555554443  345789999999999999999999999999999983  45677888888887753


Q ss_pred             --CCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCchh---------hhhhcCCcEEEEccC
Q 014594          217 --EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRM---------EWVKKHDNLIVLRTF  281 (422)
Q Consensus       217 --~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~---------~~~~~~~~~i~~~S~  281 (422)
                        .+++++++++||||||.+++.+++++|++.    ++++|+||+|.+|.+++...         ......++++++.|+
T Consensus       173 ~~~~~~~i~i~~P~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~  252 (412)
T d1yaaa_         173 APEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSF  252 (412)
T ss_dssp             SCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEEC
T ss_pred             CCCceEEEEecCCCCCccccCCHHHHHHHHhhhccCCEEEeecceeeecccCCcccchhhhhhhhhccccCCCeEEEEec
Confidence              456788889999999999999999999875    99999999999998765221         122456889999999


Q ss_pred             hhhhccccccceeeecCHHHHHHHH-----------H--hcCCCCCcHHHHHHHHHHccCCh-------HHH-HHHHHHH
Q 014594          282 SKRAGLAGLRVGYGAFPLSIIEYLW-----------R--AKQPYNVSVAAEVAACAALQNPI-------YLE-VKEALIK  340 (422)
Q Consensus       282 SK~~~~~G~r~G~i~~~~~~~~~l~-----------~--~~~~~~~~~~~~~aa~~~L~~~~-------~~~-~~~~~~~  340 (422)
                      ||.|+++|+|+||+++++++++.+.           .  .....+.+.+.|.++..++.++.       +++ +++.+++
T Consensus       253 SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  332 (412)
T d1yaaa_         253 AKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITK  332 (412)
T ss_dssp             TTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCccccCcCceEEEEEchhhhhhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998754332211           1  12235788999999999998853       344 7788999


Q ss_pred             HHHHHHHHHccCCC----CcccCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec--ChhhHHH
Q 014594          341 ERERLFKLLKDVPF----LNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG--KPEHTDA  413 (422)
Q Consensus       341 ~~~~l~~~L~~~~~----~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~  413 (422)
                      +|+.+.+.|++++.    -.+.|.+|+|+|+.+    +. +++++|+ ++||.+.++.        |||++  ++++++.
T Consensus       333 ~r~~l~~~L~~~g~~~~~~~~~~~gG~F~~~~l----s~-e~~~~L~~e~~V~~~~g~--------Ris~~g~~~~~i~~  399 (412)
T d1yaaa_         333 MRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGL----TP-QMVKRLEETHAVYLVASG--------RASIAGLNQGNVEY  399 (412)
T ss_dssp             HHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCC----CH-HHHHHHHHHHCEECCTTS--------EEEGGGCCTTTHHH
T ss_pred             HHHHHHHHHHHhCCCCCCceeCCCceEEEecCc----CH-HHHHHHHHhCCEEECCCC--------EEEeccCCHHHHHH
Confidence            99999999988652    224678999999765    34 4566665 8999988875        99986  4566788


Q ss_pred             HHHHHhhh
Q 014594          414 LMECLMHL  421 (422)
Q Consensus       414 l~~al~~l  421 (422)
                      +.++++++
T Consensus       400 l~~ai~~v  407 (412)
T d1yaaa_         400 VAKAIDEV  407 (412)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            88888764

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=100.00  E-value=4.7e-37  Score=300.65  Aligned_cols=334  Identities=14%  Similarity=0.143  Sum_probs=242.1

Q ss_pred             ccCCCCCCCchHHHHHHhCCC-CCCeEEcCCCC---C--CCCCCHHHHHHHhcC----CCCCCC-CCcchHHHHHHHHHH
Q 014594           73 KLKPYQPILPFEVLSIQLGRK-PEDIVKIDANE---N--PYGPPPEVREALGQL----KFPYIY-PDPESRRLRAALAKD  141 (422)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~---~--~~~~~~~v~~al~~~----~~~~~y-~~~~~~~lr~~la~~  141 (422)
                      ++.+.+ .+++..++.++..+ .++.|+|+.|.   +  ..+..|.|+++...+    ...+.| |..|.++||++++++
T Consensus         8 ~~~~~~-~~~i~~l~~~~~~d~~~~~Inl~iG~~~d~~g~~~~~~~V~~a~~~~~~~~~~~~~Y~p~~G~p~lreaia~~   86 (412)
T d1ajsa_           8 EVPQAQ-PVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRL   86 (412)
T ss_dssp             TCCCCC-CCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHH
T ss_pred             hCCcCC-CChHHHHHHHHhcCCCCCcEEeeCCCCcCCCCCCCCcHHHHHHHHHHHhCCCcCCCCCCCCCCHHHHHHHHHH
Confidence            344443 34455677766554 34679999992   2  234457788775442    233678 667999999999998


Q ss_pred             cC------CCCCC--EEEeCCHHHHHHHHHHH-------hcCCCCEEEEcCCCchhHHHHHHHcCCEEEEec---CCCCC
Q 014594          142 SG------LESDH--ILVGCGADELIDLIMRC-------VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP---RKSDF  203 (422)
Q Consensus       142 ~~------~~~~~--i~~~~G~~~al~~~~~~-------l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---~~~~~  203 (422)
                      +.      +++++  ++.|.|++.++..+...       +++|||+|++++|+|+.|...++..|++.+.++   .+..+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~G~~~v~~~~~~~~~~~  166 (412)
T d1ajsa_          87 ALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKR  166 (412)
T ss_dssp             HHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTT
T ss_pred             HhccCCcccccccceeecccchhhHHHHHHHHHHHHhhhcCCCCCEEEEeCCcchhhHHHHHHcCCeEEEeecccccccc
Confidence            61      23444  44566665555544433       379999999999999999999999999866554   34556


Q ss_pred             CCCHHHHHHHhh--cCCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCch------hhhhhc
Q 014594          204 SLNVELIADAVE--REKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR------MEWVKK  271 (422)
Q Consensus       204 ~~d~~~l~~~i~--~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~------~~~~~~  271 (422)
                      ..|++.+++.+.  .++++++++|+||||||.+++.+++++|++.    +++||+||+|.++.+++..      ......
T Consensus       167 ~~d~~~~~~~~~~~~~~~~~il~~~P~NPTG~v~s~e~~~~i~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~  246 (412)
T d1ajsa_         167 GLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSE  246 (412)
T ss_dssp             EECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHT
T ss_pred             cccHHHHHHHHHhccCCcEEEEecCCCCCcCCCCCHHHHHHHHHHHhhCCEEEEecHhhhhhhcCCcccchhhhhhhhhh
Confidence            788888877653  2678899999999999999999999999875    9999999999999876522      122345


Q ss_pred             CCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc---------CCCCCcHHHHHHHHHHccCCh-------HHH-H
Q 014594          272 HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK---------QPYNVSVAAEVAACAALQNPI-------YLE-V  334 (422)
Q Consensus       272 ~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~---------~~~~~~~~~~~aa~~~L~~~~-------~~~-~  334 (422)
                      .++++++.|+||.++++|+|+||++++.+.++.+.+..         ...+.+...|.++..++.+..       +++ +
T Consensus       247 ~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (412)
T d1ajsa_         247 GFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTM  326 (412)
T ss_dssp             TCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccCCCCCccccccchhHHHHHHHHHHHHHHHhhccccccchHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            67889999999999999999999999765444433221         234667788888888887642       334 7


Q ss_pred             HHHHHHHHHHHHHHHccCCCC----cccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--Ch
Q 014594          335 KEALIKERERLFKLLKDVPFL----NPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KP  408 (422)
Q Consensus       335 ~~~~~~~~~~l~~~L~~~~~~----~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~  408 (422)
                      +++++++|+.+.+.|++++..    .+.+.+|+|.|+.+    +.+.+.+.+.++||.+.++.        ||+++  ++
T Consensus       327 ~~~l~~~r~~l~~~L~~~~~~~~~~~i~~~~G~F~~~~l----s~~~v~~L~~e~gV~~vpg~--------Ri~~ag~~~  394 (412)
T d1ajsa_         327 ADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGL----NPKQVEYLINQKHIYLLPSG--------RINMCGLTT  394 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCC----CHHHHHHHHHTTCEECCTTS--------EEEGGGCCT
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCeeeecCCCeEEEecCC----CHHHHHHHHHhCCEEEeCCC--------eEEeccCCH
Confidence            778999999999999987532    24567899988654    45555444458999998875        99986  45


Q ss_pred             hhHHHHHHHHh
Q 014594          409 EHTDALMECLM  419 (422)
Q Consensus       409 ~~~~~l~~al~  419 (422)
                      ++++.+.++|+
T Consensus       395 ~~i~~~a~aI~  405 (412)
T d1ajsa_         395 KNLDYVATSIH  405 (412)
T ss_dssp             TTHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            66666655554

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.4e-37  Score=298.68  Aligned_cols=327  Identities=16%  Similarity=0.141  Sum_probs=236.7

Q ss_pred             chHHHHHHhCCC-CCCeEEcCCCC---C--CCCCCHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHHHcC------CC
Q 014594           82 PFEVLSIQLGRK-PEDIVKIDANE---N--PYGPPPEVREALGQL---KFPYIY-PDPESRRLRAALAKDSG------LE  145 (422)
Q Consensus        82 ~~~~~~~~~~~~-~~~~i~l~~~~---~--~~~~~~~v~~al~~~---~~~~~y-~~~~~~~lr~~la~~~~------~~  145 (422)
                      ++..+..++..+ .++.|+|+.|.   +  ..+.++.|++|+.++   ...+.| |..|..+||+++++++.      ..
T Consensus        12 ~i~~~~~~~~~d~~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lR~aia~~~~~~~~~~~~   91 (396)
T d2q7wa1          12 PILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALIN   91 (396)
T ss_dssp             ----------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH
T ss_pred             hHHHHHHHHhccCCCCcEEeeCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHHHHHhhcCCccc
Confidence            333444444332 23469999982   2  234568888887653   234678 55699999999999861      12


Q ss_pred             CCC--EEEeCCHHHHHHHHHH--HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHHHhhc--C
Q 014594          146 SDH--ILVGCGADELIDLIMR--CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--E  217 (422)
Q Consensus       146 ~~~--i~~~~G~~~al~~~~~--~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~  217 (422)
                      ++.  ++++.|+..++.+++.  ..+++||.|++++|+|+.|...++..|++++.++.  +.++..+.+.+++....  .
T Consensus        92 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~gd~Vlvp~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (396)
T d2q7wa1          92 DKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQA  171 (396)
T ss_dssp             TTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCT
T ss_pred             ccceeeeccchHHHHHHHHHHHHhhcccceEEEEecCCCccchHHHHHcCCeeEecccccccccccccchHHHHHHHhcc
Confidence            333  4567777766665554  34789999999999999999999999999999984  34555677776665432  5


Q ss_pred             CCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCchh-----hhhhcCCcEEEEccChhhhccc
Q 014594          218 KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRM-----EWVKKHDNLIVLRTFSKRAGLA  288 (422)
Q Consensus       218 ~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~-----~~~~~~~~~i~~~S~SK~~~~~  288 (422)
                      +++++++++||||||.+++.+++++|++.    ++++|+||+|.++.+++...     ......++.+++.|+||.++++
T Consensus       172 ~~~~i~~~~P~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~  251 (396)
T d2q7wa1         172 GDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLY  251 (396)
T ss_dssp             TCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCG
T ss_pred             CcEEEEecCCcCCcCeecCHHHHHHHHHHHhcCCeEEEEeccccccccCCccCchHhhhhhhhccccccccccccccccc
Confidence            67889999999999999999999999875    99999999999998764211     1223567889999999999999


Q ss_pred             cccceeeecCHHHHHHHHHhc---------CCCCCcHHHHHHHHHHccCC-------hHHH-HHHHHHHHHHHHHHHHcc
Q 014594          289 GLRVGYGAFPLSIIEYLWRAK---------QPYNVSVAAEVAACAALQNP-------IYLE-VKEALIKERERLFKLLKD  351 (422)
Q Consensus       289 G~r~G~i~~~~~~~~~l~~~~---------~~~~~~~~~~~aa~~~L~~~-------~~~~-~~~~~~~~~~~l~~~L~~  351 (422)
                      |+|+||++++.+.++......         ...+.+...|.++..++.++       ++++ ++++++++|+.+.+.|++
T Consensus       252 G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~  331 (396)
T d2q7wa1         252 NERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQE  331 (396)
T ss_dssp             GGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHH
T ss_pred             CCCccccccchhHHHHHHHhhhhhhhhhhccccCCCHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999876655544322         23467778888888888774       2344 777899999999999998


Q ss_pred             CCC----CcccCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhhh
Q 014594          352 VPF----LNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMHL  421 (422)
Q Consensus       352 ~~~----~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~l  421 (422)
                      ++.    ..+.+++|+|+|+.+    +. +++++|+ ++||.+.+++        |||++  ++++++.+.++|+++
T Consensus       332 ~~~~~~~~~~~~~~G~F~~~~l----~~-e~~~~L~~e~gV~~~~g~--------Ri~~a~l~~~~i~~~~~ai~~v  395 (396)
T d2q7wa1         332 KGANRDFSFIIKQNGMFSFSGL----TK-EQVLRLREEFGVYAVASG--------RVNVAGMTPDNMAPLCEAIVAV  395 (396)
T ss_dssp             TTCCSCCTHHHHCCSSEEECCC----CH-HHHHHHHHHHCEECCTTC--------EEEGGGCCTTTHHHHHHHHHHH
T ss_pred             hCCCCCcceecCCCeEEEeeCC----CH-HHHHHHHHhCCEEECCCC--------EEEecCCCHHHHHHHHHHHHHh
Confidence            752    234678899999766    33 4556665 8899998865        99997  567789999998864

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=100.00  E-value=8.9e-36  Score=289.83  Aligned_cols=336  Identities=15%  Similarity=0.145  Sum_probs=244.9

Q ss_pred             hccCCCCCCCchHHHHHHhCCC-CCCeEEcCCCC-----CCCCCCHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHHH
Q 014594           72 RKLKPYQPILPFEVLSIQLGRK-PEDIVKIDANE-----NPYGPPPEVREALGQL---KFPYIY-PDPESRRLRAALAKD  141 (422)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~-----~~~~~~~~v~~al~~~---~~~~~y-~~~~~~~lr~~la~~  141 (422)
                      ..+++. +.+++..+..++..+ .++.|+|+.|.     ...+++|.|++|+.++   ...+.| |..|.++||++++++
T Consensus         3 ~~~~~~-~~d~i~~l~~~~~~d~~~~~InL~iG~~~d~~g~~~~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lr~aia~~   81 (394)
T d2ay1a_           3 GNLKPQ-APDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGEL   81 (394)
T ss_dssp             GGCCCC-CCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHH
T ss_pred             CCCCCC-CCChHHHHHHHHhCCCCCCCEEccCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHH
Confidence            345665 345566666555433 34579999983     2234458888887763   233678 666999999999999


Q ss_pred             c---CC--CCCCEEEeCCHH--HHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecC--CCCCCCCHHHHHH
Q 014594          142 S---GL--ESDHILVGCGAD--ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIAD  212 (422)
Q Consensus       142 ~---~~--~~~~i~~~~G~~--~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~  212 (422)
                      +   +.  .....+++.|++  .++.+.+..+.++||.|++++|+|+.|...++..|++++.++.  +.++..+.+.+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gd~V~~p~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~  161 (394)
T d2ay1a_          82 ILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKA  161 (394)
T ss_dssp             HHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHH
T ss_pred             HhccccccccccceeccCchHHHHHHHHHhhhcCCceEEEEecccccchHHHHHHcCCEEEEecccchhcccccchhHHH
Confidence            6   11  122344444444  4455666667899999999999999999999999999999984  3455667777666


Q ss_pred             Hhh--cCCCeEEEEeCCCCccCcCCCHHHHHHHHcC----CCeEEEccCCccccCCCchhh-----hhhcCCcEEEEccC
Q 014594          213 AVE--REKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME-----WVKKHDNLIVLRTF  281 (422)
Q Consensus       213 ~i~--~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~----~~~li~Deay~~~~~~~~~~~-----~~~~~~~~i~~~S~  281 (422)
                      ...  ..+++++++++||||||.+++.+++++|++.    ++++|+||+|.++.+++....     ......+.+++.|+
T Consensus       162 ~~~~~~~~~~i~~~~~p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~  241 (394)
T d2ay1a_         162 DLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASC  241 (394)
T ss_dssp             HHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEEC
T ss_pred             HHhhcccCcEEEEeCCCCCCCCCCCCHHHHHHHHHHhhcceEEEEEeccchhhcccccccchhhhhhhhhcccccccccc
Confidence            553  2457788888999999999999999999875    999999999999987653211     12245678999999


Q ss_pred             hhhhccccccceeeecCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHccCCh-------HHH-HHHHHHHHHHH
Q 014594          282 SKRAGLAGLRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNPI-------YLE-VKEALIKERER  344 (422)
Q Consensus       282 SK~~~~~G~r~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~aa~~~L~~~~-------~~~-~~~~~~~~~~~  344 (422)
                      ||.++++|+|+||++++...++.....         ....+.+...|..+...+.++.       +++ ++++++++|+.
T Consensus       242 sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r~~  321 (394)
T d2ay1a_         242 SKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQ  321 (394)
T ss_dssp             TTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCcccccchhhchhHHHHHHHhhhhhHhhhcccccchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999876555443322         1224556677777777777642       333 77788899999


Q ss_pred             HHHHHccCC----CCcccCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHH
Q 014594          345 LFKLLKDVP----FLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMEC  417 (422)
Q Consensus       345 l~~~L~~~~----~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~a  417 (422)
                      +.+.|++++    +-.+.|.+|+|+|+.++    . +++++|+ ++||.+.++.        |||++  ++++++.+.++
T Consensus       322 l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls----~-~~~~~L~~~~~V~~~~g~--------Ri~~a~l~~~~i~~l~~a  388 (394)
T d2ay1a_         322 LAGELRDLSGSDRFGFVAEHRGMFSRLGAT----P-EQVKRIKEEFGIYMVGDS--------RINIAGLNDNTIPILARA  388 (394)
T ss_dssp             HHHHHHHHHTSSTTTHHHHCCSSEEECCCC----H-HHHHHHHHHHCEECCTTC--------EEEGGGCCTTTHHHHHHH
T ss_pred             HHHHHHHhCCCCceeeECCCceeEEecCcC----H-HHHHHHHHhCCEEecCCC--------EEEecCCCHHHHHHHHHH
Confidence            999998753    22346789999998763    3 4566765 8899999875        99987  46678999999


Q ss_pred             Hhhh
Q 014594          418 LMHL  421 (422)
Q Consensus       418 l~~l  421 (422)
                      |..+
T Consensus       389 i~~v  392 (394)
T d2ay1a_         389 IIEV  392 (394)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            9875

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=100.00  E-value=3.7e-36  Score=292.65  Aligned_cols=308  Identities=16%  Similarity=0.146  Sum_probs=224.2

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhc--C--C-CCCCC--CCc---chHHHHHHHHHHc---C---CCCCCEEEeCCHHH
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQ--L--K-FPYIY--PDP---ESRRLRAALAKDS---G---LESDHILVGCGADE  157 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~--~--~-~~~~y--~~~---~~~~lr~~la~~~---~---~~~~~i~~~~G~~~  157 (422)
                      ++-++|++.|++.+-.+--...+-..  .  . +...|  .+.   -..+|+++|++++   |   .+..+|++|+|++|
T Consensus        55 ~~~~~~~~~gdp~~~~~~w~~~~~~~~~~~~~~~~~sy~~~~~~~~~~~~L~~~i~~lh~~~gna~t~~~~IvvG~Gste  134 (425)
T d2hoxa1          55 QGCSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQ  134 (425)
T ss_dssp             TTCCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHH
T ss_pred             CCceeeCCCCCCCCCCHHHHhCcccceEEeecccccceecCCccccCCHHHHHHHHHHHhhhCCCCCCCCEEEECCCHHH
Confidence            34579999999887432111111111  1  1 11223  221   2479999999987   2   24457999999999


Q ss_pred             HHHHHHHHh--------cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCC
Q 014594          158 LIDLIMRCV--------LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN  229 (422)
Q Consensus       158 al~~~~~~l--------~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~N  229 (422)
                      +|.+++.+|        ++|||+|+++.|+|+.|...++..|.+.+.      |.+|.+.+++.++ ++++++++|||||
T Consensus       135 li~~~~~AL~~~~~~~~~~pg~~Vv~~~P~y~~Y~~~~~~~~~~~~~------~~~D~~~~~~~~~-~~~~ii~l~sPnN  207 (425)
T d2hoxa1         135 LIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYV------WAGNAANYVNVSN-PEQYIEMVTSPNN  207 (425)
T ss_dssp             HHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEE------EEEEGGGGTTCSC-GGGEEEEEESSCT
T ss_pred             HHHHHHHHhccccccccCCCCCEEEEecCccccHHHHHHHcCCCCCc------cCCCHHHHHhhCC-CCceEEEEECCCC
Confidence            999999998        578999999999999999999988876554      4467778877776 6899999999999


Q ss_pred             ccCcCCCHHHHHHHHcCCCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeec-CHHHHHHHHHh
Q 014594          230 PDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRA  308 (422)
Q Consensus       230 PtG~~~~~e~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~~~l~~~  308 (422)
                      |||.+..      -+..++.+|.||+|.+..+.    ......+++|+++||||.||++|+|+||+++ ++.+++++.+.
T Consensus       208 PtG~l~~------~v~~~~~~I~DEaY~~~~f~----~~~~~~~~~Ivl~S~SK~fglaGlRiGw~i~~~~~i~~~~~~~  277 (425)
T d2hoxa1         208 PEGLLRH------AVIKGCKSIYDMVYYWPHYT----PIKYKADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNY  277 (425)
T ss_dssp             TTCCCCC------CSSTTCEEEEECTTCSTTTS----CCCSCBCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHH
T ss_pred             CCcchhh------hhhhCCEEEEeccccCcccc----chhhhcCCeEEEEeCHHhccCcchheeeEEeCCHHHHHHHHHh
Confidence            9998631      11238999999999743322    2233567889999999999999999999766 56677777665


Q ss_pred             cC--CCCCcHHHHHHHHHHccC------------ChHHH-HHHHHHHHHHHHHHHHccCCCCc---------------cc
Q 014594          309 KQ--PYNVSVAAEVAACAALQN------------PIYLE-VKEALIKERERLFKLLKDVPFLN---------------PY  358 (422)
Q Consensus       309 ~~--~~~~~~~~~~aa~~~L~~------------~~~~~-~~~~~~~~~~~l~~~L~~~~~~~---------------~~  358 (422)
                      ..  .++++.+.|.++.++|++            .++.+ .++.++++++++.+.|++.+...               ..
T Consensus       278 ~~~~~~~vs~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~~~~~l~~~p~~~~~~f~~~~~  357 (425)
T d2hoxa1         278 MTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMR  357 (425)
T ss_dssp             HHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEE
T ss_pred             hccCcccCCHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeccCCccceeeeeecc
Confidence            43  478899999999888864            24555 78889999999999998865321               23


Q ss_pred             CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCC-CCeEEEEecChhhHHHHHHHHhhh
Q 014594          359 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKEL-KGYVRVSVGKPEHTDALMECLMHL  421 (422)
Q Consensus       359 p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~-~~~iRis~~~~~~~~~l~~al~~l  421 (422)
                      ++.+.|+|++... .+.+.+.+.|+++||.+++|..++. ++|+|||+..+++  .|.+++++|
T Consensus       358 ~~~~~f~wl~~~~-~~~~~~~~lL~e~gI~v~pGs~FG~~~~yvRisl~~~~e--~ld~~l~rL  418 (425)
T d2hoxa1         358 PPSPSYAWVKCEW-EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQD--DFDQLMYYL  418 (425)
T ss_dssp             CCCCSEEEEEECS-GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSSCHH--HHHHHHHHH
T ss_pred             CCCcceeeeeCCC-ChHHHHHHHHHhCCEEEEechhcCCCCCEEEEEecCCHH--HHHHHHHHH
Confidence            4566789998852 2223345566799999999988653 6899999987654  355555554

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=99.95  E-value=5.6e-27  Score=226.15  Aligned_cols=315  Identities=16%  Similarity=0.124  Sum_probs=226.7

Q ss_pred             eEEcCCCCCCCCCCHHHHHHHhcC-C----C-CCCCCCc-----chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594           97 IVKIDANENPYGPPPEVREALGQL-K----F-PYIYPDP-----ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (422)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~-~----~-~~~y~~~-----~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~  165 (422)
                      .+.|+.+... +.|..|++++.+. .    . ...+...     -..++|+.+++++|+++++|++|+|+++++++++.+
T Consensus         8 ~~yld~~~~~-~~p~~v~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~i~~~~g~t~a~~~~~~~   86 (381)
T d1elua_           8 KTYFNFGGQG-ILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWG   86 (381)
T ss_dssp             SEECCTTTCC-CCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHH
T ss_pred             CEEeeCCccc-CCCHHHHHHHHHHHHHhhcCCCccchhhHHHHHHHHHHHHHHHHHhCCCcccEEEECChHHHhhhcchh
Confidence            4678765432 3455677777552 1    1 1112111     134689999999999999999999999999999998


Q ss_pred             h-cCCCCEEEEcCCCchhH----HHHHHHcCCEEEEecCCCCCCC--CHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHH
Q 014594          166 V-LDPGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPRKSDFSL--NVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (422)
Q Consensus       166 l-~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~--d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e  238 (422)
                      + .++||+|+++.+.|+..    ...++..|++++.+|.+.+...  +.+.+++.++ ++++++++++++||||.++|.+
T Consensus        87 l~~~~g~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~i~-~~t~~v~i~~~~n~tG~~~~~~  165 (381)
T d1elua_          87 LDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLG-PKTRLVILSHLLWNTGQVLPLA  165 (381)
T ss_dssp             SCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCC-TTEEEEEEESBCTTTCCBCCHH
T ss_pred             hhhcCCceEEEeccccceeeeccccccccccccccccccccccccchHHHHHHhhhc-ccccccccccccccccccchhh
Confidence            8 68999999999999743    3455668999999995433222  2566777776 7999999999999999999999


Q ss_pred             HHHHHHcC-----CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc----
Q 014594          239 DLLKILEM-----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK----  309 (422)
Q Consensus       239 ~l~~i~~~-----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~----  309 (422)
                      ++.++++.     ++++++|.+|+....    ...+...+.++++.|++|.++ .+.++|+++++++..+.+....    
T Consensus       166 ~I~~l~~~~~~~~~~~~~vD~~~~~g~~----~~~~~~~~~D~~~~s~~K~~~-~p~G~g~l~~~~~~~~~~~p~~~~~~  240 (381)
T d1elua_         166 EIMAVCRRHQGNYPVRVLVDGAQSAGSL----PLDFSRLEVDYYAFTGHKWFA-GPAGVGGLYIHGDCLGEINPTYVGWR  240 (381)
T ss_dssp             HHHHHHHHCCSSSCCEEEEECTTTBTTB----CCCTTTSCCSEEEEESSSTTC-CCTTCEEEEECTTTGGGCCCCSCCTT
T ss_pred             HHHHHHhhcccccccccccccccccccc----ccccccccccccccccccccc-ccchhhHHHhhHHHHHhcCccccccc
Confidence            99999973     799999999874321    111223345588899999876 3456899998887766543111    


Q ss_pred             --------------------CCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCccc---CCCc
Q 014594          310 --------------------QPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPY---PSYS  362 (422)
Q Consensus       310 --------------------~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~---p~~~  362 (422)
                                          ...+.+.....++.++++.   ....+ ..++.+++++++.+.|++++++.+.   ...+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~  320 (381)
T d1elua_         241 SITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQA  320 (381)
T ss_dssp             TEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSS
T ss_pred             ccccccccccccccccccccccccccchhhhhhhhhhhhHHHhcccccchhhhhhHHHHHHHHHhcCCCeEecCCCCccc
Confidence                                1123445555555555543   22234 5678888899999999998776543   2345


Q ss_pred             eEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          363 NFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       363 ~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      .++.+.+++..+.+++.+.|.++||.++...   .++++|||++   +.+|+|++.++|+++
T Consensus       321 ~~vsf~~~~~~~~~~i~~~L~~~gi~v~~~~---~~~~lRis~~~~nt~edid~ll~~l~e~  379 (381)
T d1elua_         321 GLVSFTVDSPLGHRAIVQKLEEQRIYLRTIA---DPDCIRACCHYITDEEEINHLLARLADF  379 (381)
T ss_dssp             SEEEEEECSSSCHHHHHHHHHHTTEECEEET---TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred             cEEEEEcCCCCCHHHHHHHHHhCCcEEEecC---CCCEEEEecCCCCCHHHHHHHHHHHHhh
Confidence            5777888766778899999999999988654   3689999986   667888888888876

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=7.3e-26  Score=219.06  Aligned_cols=312  Identities=15%  Similarity=0.112  Sum_probs=219.5

Q ss_pred             EEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc--c-----------hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           98 VKIDANENPYGPPPEVREALGQL-KFPYIYPDP--E-----------SRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~-~~~~~y~~~--~-----------~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      |.||.+.. -+.++.|++++.+. .....|+++  +           ..++|+.+++++|+++++|++|+|+++++..++
T Consensus         4 iYlD~aa~-~p~~~~v~ea~~~~~~~~~~~~np~~~~~~~~~~~~~~~~~~R~~iA~~lg~~~~~I~~~~~~t~~l~~~~   82 (391)
T d1p3wa_           4 IYLDYSAT-TPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAI   82 (391)
T ss_dssp             EECBTTTC-CCCCHHHHHHHHTTTSTTSCCCCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHH
T ss_pred             EEeeCccc-cCCCHHHHHHHHHHHHhccccCCCchhhhHHHHHHHHHHHHHHHHHHHHcCCCCCcEEEECCHHHHHHHHH
Confidence            67877654 35689999999873 333344332  1           236889999999999999999999999999988


Q ss_pred             HHh----cCCCCEEEEcCCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594          164 RCV----LDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (422)
Q Consensus       164 ~~l----~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (422)
                      .++    .++||+|++.++.|+.+...   ++..|+++..++.+.++.+|+++++++++ ++|++|++++++||||.++|
T Consensus        83 ~~~~~~~~~~gd~Vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~~~~~i~-~~T~lv~is~~~n~tG~~~~  161 (391)
T d1p3wa_          83 KGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMR-DDTILVSIMHVNNEIGVVQD  161 (391)
T ss_dssp             HHHHHHHGGGCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCC-TTEEEEECCSBCTTTCCBCC
T ss_pred             hhhhhhhcCCCCEEEEeccccchHHHHHHHHHHcCCEEEEeCCCCCCeEcHHHHHHhCC-CCcEEEEEECCCCCCeeECC
Confidence            865    47999999999999866443   34579999999987778899999999997 89999999999999999999


Q ss_pred             HHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC-----
Q 014594          237 DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-----  310 (422)
Q Consensus       237 ~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~-----  310 (422)
                      .++|.++++. |+++++|++|......-    .+...+..+++.|..|.+|.+|  +|+++++++..........     
T Consensus       162 ~~~I~~~~~~~~~~~ivD~~~~~g~~~~----d~~~~~~D~~~~s~~k~~g~~g--~g~~~~~~~~~~~~~~~~~gg~~~  235 (391)
T d1p3wa_         162 IAAIGEMCRARGIIYHVDATQSVGKLPI----DLSQLKVDLMSFSGHKIYGPKG--IGALYVRRKPRVRIEAQMHGGGHE  235 (391)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTBTTBCC----CTTTSCCSEEEEESTTTTSCSS--CEEEEECBTTBCCCCCSSCSSCTT
T ss_pred             HHHHHHHhccCCcEEEEeeccccCCccc----cchhccccccccccccccCCCc--eEEEEEecchhcccCCcccCCccc
Confidence            9999999987 99999999997543211    1112334477788999876555  6888887665443321111     


Q ss_pred             ----CCCCcHHHHHHHHHHccC-ChHHH-HHHHHHHHHHHHHHHHccCCCCccc---CC-CceEEEEEeCCCCCHHHHHH
Q 014594          311 ----PYNVSVAAEVAACAALQN-PIYLE-VKEALIKERERLFKLLKDVPFLNPY---PS-YSNFILCEVTSGMDAKKLKD  380 (422)
Q Consensus       311 ----~~~~~~~~~~aa~~~L~~-~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~---p~-~~~f~~~~~~~~~~~~~~~~  380 (422)
                          .+..+.....++...+.. .+... ..+++++.++++.+.|.+++...+.   +. ....+.+.++ +.+.+.+..
T Consensus       236 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  314 (391)
T d1p3wa_         236 RGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFN-YVEGESLIM  314 (391)
T ss_dssp             TTTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTEEECSCTTTSCTTEEEEEET-TSCHHHHHH
T ss_pred             cCcccCcchhhhhhhhhhhhhHHHHHhhHHHHHHHHHHHHHHHHHHhhcCeeecccccccCceEEEEEeC-CCChHHHHH
Confidence                123333333333333322 12222 5667788888899999887654432   12 2233445565 567788877


Q ss_pred             HHHhCCcEEEeCCCC--------------C-----CCCeEEEEec---ChhhHHHHHHHHhh
Q 014594          381 DLAKMGVMIRHYNNK--------------E-----LKGYVRVSVG---KPEHTDALMECLMH  420 (422)
Q Consensus       381 ~L~~~gI~v~~~~~~--------------~-----~~~~iRis~~---~~~~~~~l~~al~~  420 (422)
                      .|  +++.++.|...              +     ..++||||++   +.+|+|.+.++|++
T Consensus       315 ~l--~~i~v~~G~~c~~~~~~~~~~l~~~g~~~~~~~g~iRiS~~~~nt~edid~l~~~l~~  374 (391)
T d1p3wa_         315 AL--KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRK  374 (391)
T ss_dssp             HT--TTEECBCCCC------CCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             Hh--CCCEEEccccccCCccchhHHHHHcCCCccccCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence            77  45666544320              0     1257999987   66778888887765

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.94  E-value=2.8e-27  Score=226.97  Aligned_cols=309  Identities=13%  Similarity=0.056  Sum_probs=208.5

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 014594           96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLDPGDKIV  174 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~~~~~~l~~~gd~Vl  174 (422)
                      .++++....+.++..+...+++...    ..|..+..++++..++.++.+ .+++++++|+++++..++.++.+++|.|+
T Consensus        21 ~i~~~~gl~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~a~~~~l~al~~~~~vi~   96 (366)
T d2aeua1          21 ALYDLSGLSGGFLIDEKDKALLNTY----IGSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILALKPKKVIHY   96 (366)
T ss_dssp             GCEECSSCCCCCCCCHHHHHHHTST----THHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHCCSEEEEE
T ss_pred             hHhhhccCCCCCCccHHHHHHHHHh----cCchhhHHHHHHHHHHHccCCCccEEEEeCCHHHHHHHHHHHhCCCCEEEE
Confidence            4678887777787777776666432    113335678999989888764 46899999999999999998764444344


Q ss_pred             Ec-CCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccC-cCCCHHHHHHHHcC-CCeEE
Q 014594          175 DC-PPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG-SIINDEDLLKILEM-PILVV  251 (422)
Q Consensus       175 ~~-~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG-~~~~~e~l~~i~~~-~~~li  251 (422)
                      ++ .|+|..+...++..|++++...       |+++++++++ +++|+|++++|+||++ ...+.+++.+||+. |+++|
T Consensus        97 ~~~~~~~~~~~~~~~l~g~~~v~~~-------d~e~l~~~i~-~~tk~i~~~~p~n~~~~~~~~l~~i~~ia~~~~~~~i  168 (366)
T d2aeua1          97 LPELPGHPSIERSCKIVNAKYFESD-------KVGEILNKID-KDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVF  168 (366)
T ss_dssp             CSSSSCCTHHHHHHHHTTCEEEEES-------CHHHHHTTCC-TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEE
T ss_pred             ecCCCcchhHHHHHHhcCCeEECCC-------CHHHHHHhcC-CCceEEEEEecCCCCcCCHHHHHHHHHHhccCcEEEE
Confidence            43 5899999999999999876432       7999999998 7999999999999753 23344555555555 99999


Q ss_pred             EccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCC
Q 014594          252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNP  329 (422)
Q Consensus       252 ~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~  329 (422)
                      +||+|....++..........+..+++.|+||.+  +|+|+||+++++++++.+......  ++++++.+.++..+|+.-
T Consensus       169 ~De~y~~~~~~~~~~~~~~~~~~di~~~S~sK~~--~g~~~G~i~~~~~~i~~~~~~~~~~g~~~~~~~~~a~~~aL~tl  246 (366)
T d2aeua1         169 VDDASGARVRLLFNQPPALKLGADLVVTSTDKLM--EGPRGGLLAGKKELVDKIYIEGTKFGLEAQPPLLAGIYRALKNF  246 (366)
T ss_dssp             EECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSS--SSCSCEEEEEEHHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHC
T ss_pred             EecCccccccccccCCCHhhcCceEEEecccccc--cccceeEEEecHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhc
Confidence            9999985432111000011223448889999964  689999999999999999876644  567888888888877532


Q ss_pred             hH--HH-HHHHHHH----HHHHHHHHHccCCCC---cccCCCceEEEEEeCCC-----CCHHHHHHHHH-hCCcEEEeCC
Q 014594          330 IY--LE-VKEALIK----ERERLFKLLKDVPFL---NPYPSYSNFILCEVTSG-----MDAKKLKDDLA-KMGVMIRHYN  393 (422)
Q Consensus       330 ~~--~~-~~~~~~~----~~~~l~~~L~~~~~~---~~~p~~~~f~~~~~~~~-----~~~~~~~~~L~-~~gI~v~~~~  393 (422)
                      ..  ++ ..+..++    ..+.+......+...   ...+..+.|++......     .+..+++..|. ++||.+.|+.
T Consensus       247 ~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ll~~~gV~~ip~~  326 (366)
T d2aeua1         247 NLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTINIKKLIEIGFNLLKNYGIITITVA  326 (366)
T ss_dssp             CHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHCEECSTTS
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhhccccccccccCcccccCccchhccCCCcceeecccCHHHHHHHHHHhCCEEEEECC
Confidence            21  11 1111111    122222222222222   22345667777766532     13456777776 7799998876


Q ss_pred             C-CCCCCeEEEEecChh----hHHHHHHHH
Q 014594          394 N-KELKGYVRVSVGKPE----HTDALMECL  418 (422)
Q Consensus       394 ~-~~~~~~iRis~~~~~----~~~~l~~al  418 (422)
                      . ++.++++|||++..+    +.+.+.+++
T Consensus       327 ~~p~~~~~lRis~~~~~~~~i~~d~l~~ai  356 (366)
T d2aeua1         327 GMPGASKSLRIDLTSRDAERIDDNYIIKAI  356 (366)
T ss_dssp             SSCSSCCSEEEETTSGGGGGSCHHHHHHHH
T ss_pred             CCCCCCCEEEEeccccchhhCCHHHHHHHH
Confidence            6 467789999998642    346666666

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.93  E-value=7.6e-25  Score=209.40  Aligned_cols=303  Identities=16%  Similarity=0.175  Sum_probs=203.2

Q ss_pred             CCHHHHHHHhcCCCCC---CCC---------Ccc-hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 014594          109 PPPEVREALGQLKFPY---IYP---------DPE-SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVD  175 (422)
Q Consensus       109 ~~~~v~~al~~~~~~~---~y~---------~~~-~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~  175 (422)
                      .++++++++.+...++   .|.         .+. ...+++.+|+++|.  +++++|+|+++|+..++.+++++||+|++
T Consensus        14 l~~~a~~a~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~A~~~g~--e~~~~t~g~t~a~~~~~~al~~~gd~Vi~   91 (364)
T d2e7ja1          14 LTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGC--DVARVTNGAREAKFAVMHSLAKKDAWVVM   91 (364)
T ss_dssp             CCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTS--SEEEEESSHHHHHHHHHHHHCCTTCEEEE
T ss_pred             CCHHHHHHHHHHhcCCchhccccccccccccChHHHHHHHHHHHHHhCc--CEEEEECcHHHHHHHHHHHHhCCCcEEEe
Confidence            3578888887632111   110         111 45689999999996  68999999999999999999999999999


Q ss_pred             cCCCchhHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhc----CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CC
Q 014594          176 CPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER----EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PI  248 (422)
Q Consensus       176 ~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~----~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~  248 (422)
                      +.++|......++..|++++.+|.+  .++.+|++++++.+++    .++++|++++|+||||.+.+.+++.++++. |+
T Consensus        92 ~~~~h~s~~~~~~~~g~~v~~v~~~~~~~~~i~~~~l~~~i~~~~k~~~~~lv~i~~~~n~tG~~~~l~~I~~ia~~~~i  171 (364)
T d2e7ja1          92 DENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDV  171 (364)
T ss_dssp             ETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTC
T ss_pred             ecccccccchHHHhccceEEEeeeccccccccCHHHHHhhhhhhcccCCceEEEeecCCCCCceeecchhheeccccccc
Confidence            9999988777888999999999853  4578999999999853    345688899999999999999999999998 99


Q ss_pred             eEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCC----------CCcHHH
Q 014594          249 LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY----------NVSVAA  318 (422)
Q Consensus       249 ~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~----------~~~~~~  318 (422)
                      ++++|++|......... .   ..+.++++.|++|.++.+| ++||+++++++++.+.+....+          ......
T Consensus       172 ~livD~a~~~g~~~~~~-~---~~g~D~~~~S~~K~~~~~g-~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (364)
T d2e7ja1         172 PLLVNGAYAIGRMPVSL-K---EIGADFIVGSGHKSMAASG-PIGVMGMKEEWAEIVLRRSEKYKNKEVELLGCTARGAT  246 (364)
T ss_dssp             CEEEECTTTBTTBCCCH-H---HHTCSEEEEEHHHHSSCCS-SCEEEEECTTTTTTTTCBCSSCTTSBGGGTTCCCCSHH
T ss_pred             hhhccccchhhhhhhcc-c---ccccceeeeccccccCCCC-CEEEEEECHHHHHHHHhhccccCcccccccccccchhH
Confidence            99999999743322111 1   1233478899999998666 7999999998877665433221          111222


Q ss_pred             HHHHHHHccC-ChHHHHHHHHHHHHHHHHHHHccCCCCcc--cCCCceEEEEEeCC--------CCCHHHHHHHHHhCCc
Q 014594          319 EVAACAALQN-PIYLEVKEALIKERERLFKLLKDVPFLNP--YPSYSNFILCEVTS--------GMDAKKLKDDLAKMGV  387 (422)
Q Consensus       319 ~~aa~~~L~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~~f~~~~~~~--------~~~~~~~~~~L~~~gI  387 (422)
                      ..++.+.+.. .++.+......++++++.+.|+++++...  .+......++..+.        ......+...|.+.|+
T Consensus       247 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  326 (364)
T d2e7ja1         247 IITLMASFPHVRERIKRWDEEVEKARRFAAEMEKLGIKQLGDNPHNHDLMFFHAEVLYEISKKAKGGRFFLYRELKSRKI  326 (364)
T ss_dssp             HHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHTTCEEESSSSCCSSEEEEECHHHHHHHHHSSSGGGHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCCcceEEEeccchHHHHHHhhccchHHHHHHHhcCC
Confidence            2233333321 12222222233566678888888775432  23334444554431        1112234455566776


Q ss_pred             EEEeCCCCCCCCeEEEEe-c-ChhhHHHHHHHHhhh
Q 014594          388 MIRHYNNKELKGYVRVSV-G-KPEHTDALMECLMHL  421 (422)
Q Consensus       388 ~v~~~~~~~~~~~iRis~-~-~~~~~~~l~~al~~l  421 (422)
                      ....   .+....+|++. + +.++++++.++|+.+
T Consensus       327 ~~~~---~g~~~~~~~~~~~~t~edid~~~~~l~ei  359 (364)
T d2e7ja1         327 HGIK---PGLTRYFKLSTYGLSDEEVDYVLNAFKEI  359 (364)
T ss_dssp             ECSC---TTCCSEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred             ceec---CCCcceEEEeccCCCHHHHHHHHHHHHHH
Confidence            4322   33456778774 3 456778888887764

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=1.2e-24  Score=211.22  Aligned_cols=318  Identities=18%  Similarity=0.188  Sum_probs=236.6

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCC----c-------chHHHHHHHHHHcCC-CCCCEEEeCCHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPD----P-------ESRRLRAALAKDSGL-ESDHILVGCGADELIDL  161 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~----~-------~~~~lr~~la~~~~~-~~~~i~~~~G~~~al~~  161 (422)
                      .+++.|+.+... +.|+.+.+++.+ +...+..|.    .       ...+.|+.+++++|. ++++|++++|+|++++.
T Consensus        21 ~~~iYld~a~~~-~~p~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~e~~R~~ia~~l~~~~~~~i~~~~~~T~~~~~   99 (405)
T d1jf9a_          21 LPLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINL   99 (405)
T ss_dssp             EECEECCTTTCC-CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHH
T ss_pred             CCeEEEeCcccc-CCCHHHHHHHHHHHHhccCCCccchhHHHHHHHHHHHHHHHHHHHHcCCCCcccccccCcHHHHHHH
Confidence            456899887665 567888888876 211111111    1       145789999999996 45899999999999998


Q ss_pred             HHHHh----cCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCc
Q 014594          162 IMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (422)
Q Consensus       162 ~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~  233 (422)
                      ++..+    ..+||+|++..-.|+.    +...++..|++++.+|.+.+..+|++.++++++ ++|+++++++.+|.||.
T Consensus       100 ~~~~~~~~~~~~g~~il~~~~e~~s~~~~~~~~a~~~g~~v~~~~~~~~g~~~~~~~~~~i~-~~t~lv~~~~v~~~tG~  178 (405)
T d1jf9a_         100 VANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-EKTRLLAITHVSNVLGT  178 (405)
T ss_dssp             HHHHHHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCC-TTEEEEEEESBCTTTCC
T ss_pred             HHhcccccccCCCCEEEEEeCcccchHHHHHHHHHHcCcEEEEECCCCCCcCCHHHHHHhcc-CCcEEEEEecCCCcccc
Confidence            88753    5789999999999974    455667789999999988888999999999997 79999999999999999


Q ss_pred             CCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc---
Q 014594          234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK---  309 (422)
Q Consensus       234 ~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~---  309 (422)
                      ++|.+++.++++. |+++++|.+++.....-    .+...+.++++.|+.|.+|.+|  +|+++++++..+.+....   
T Consensus       179 ~~pi~~i~~~~~~~g~~~~vD~~q~~g~~~i----d~~~~~~D~~~~s~hK~~Gp~G--~g~l~v~~~~~~~~~~~~~~~  252 (405)
T d1jf9a_         179 ENPLAEMITLAHQHGAKVLVDGAQAVMHHPV----DVQALDCDFYVFSGHKLYGPTG--IGILYVKEALLQEMPPWEGGG  252 (405)
T ss_dssp             BCCHHHHHHHHHHTTCEEEEECTTTTTTSCC----CHHHHTCSEEEEEGGGTTSCSS--CEEEEECHHHHTTCCCSSCSS
T ss_pred             cCchHHhhhHHHHcCCeeecccceecccccc----chhhcCCceeeccccccccCCC--ceeeeechhhhcccCcccccc
Confidence            9999999999987 99999999988433211    1122334588999999776555  899999998776532110   


Q ss_pred             ---------------------CCCCCcHHHHHHHHHHccCCh--HHH-HHHHHHHHHHHHHHHHccCCCCccc-C-CCce
Q 014594          310 ---------------------QPYNVSVAAEVAACAALQNPI--YLE-VKEALIKERERLFKLLKDVPFLNPY-P-SYSN  363 (422)
Q Consensus       310 ---------------------~~~~~~~~~~~aa~~~L~~~~--~~~-~~~~~~~~~~~l~~~L~~~~~~~~~-p-~~~~  363 (422)
                                           ...+.+.....++.++++...  ..+ +.++.....+++.+.++.++..... | ..+.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~L~~~~~~~l~~~~~~~~~~~~~r~~  332 (405)
T d1jf9a_         253 SMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLG  332 (405)
T ss_dssp             SSEEECCTTTCCEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCS
T ss_pred             cccCccccccccccccchhhhcCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHhhhhcCCcccccCCcCcCc
Confidence                                 123566666676766665321  123 6666777788888888888765532 2 2345


Q ss_pred             EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          364 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       364 f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~--------~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      .+.+.++ +.++.++...|.++||.++.|..        .+.++++|||++   +.+|+|++.++|+++
T Consensus       333 ivsf~~~-~~~~~~~~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~iRiS~~~ynt~eDid~l~~~l~~i  400 (405)
T d1jf9a_         333 VIAFNLG-KHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRI  400 (405)
T ss_dssp             EEEEEET-TCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             EEEEEcC-CCCHHHHHHHHHHCCcEEEccchhhhhHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence            6667887 66888999999999999987654        245689999986   567788888888765

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=1.9e-24  Score=207.80  Aligned_cols=317  Identities=16%  Similarity=0.120  Sum_probs=238.3

Q ss_pred             CCCCeEEcCCCC-CCCCCCHHHHHHHhc-C-CCCCC-------CCC-cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           93 KPEDIVKIDANE-NPYGPPPEVREALGQ-L-KFPYI-------YPD-PESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        93 ~~~~~i~l~~~~-~~~~~~~~v~~al~~-~-~~~~~-------y~~-~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      +++++++|++++ -.+..+|+++++..+ + .++.+       +.. .-..+|++.||+++|.  +..++.+++..+...
T Consensus        36 ~g~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~G~~~~~sr~~~g~~~~~~~lE~~LA~~~g~--e~al~~~SG~~an~~  113 (383)
T d1bs0a_          36 DDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGY--SRALLFISGFAANQA  113 (383)
T ss_dssp             TTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHH
T ss_pred             CCeEEEEEEcccccccCCCHHHHHHHHHHHHHhCCCCCccccccCcchHHHHHHHHHHHhcCC--CceEEecccchhhHH
Confidence            456789998864 345568888877665 2 12111       122 2368999999999995  578888888999999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc--CCCeEEEEeCCCCccCcCCCHHH
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDED  239 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~e~  239 (422)
                      ++.+++.++|.|++....|..+...++..+++++.++     ..|++++++.+.+  ++.++|+++++++++|.+.|.++
T Consensus       114 ~i~al~~~~d~v~~d~~~h~si~~g~~~~~~~~~~~~-----hnd~~~le~~l~~~~~~~~~vv~e~v~s~~G~i~pl~~  188 (383)
T d1bs0a_         114 VIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFA-----HNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAE  188 (383)
T ss_dssp             HHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEEC-----TTCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHH
T ss_pred             HHHhhcCCCceEEeeccccHHHhhccccCCCcceEec-----chHHHHHHHHhcccCCCceEEEecCCCCCCCcccchhH
Confidence            9999999999999999999988888888999999887     4578888888754  34668888899999999999999


Q ss_pred             HHHHHcC-CCeEEEccCCccccCCCchh---hhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC----
Q 014594          240 LLKILEM-PILVVLDEAYTEFSGLESRM---EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----  311 (422)
Q Consensus       240 l~~i~~~-~~~li~Deay~~~~~~~~~~---~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~----  311 (422)
                      +.+|++. |+++++||+|..+..+....   ... .....+++.|++|.+|..|   |++.++.++++.++....+    
T Consensus       189 l~~l~~~~~~~livDeah~~gv~G~~g~G~~~~~-~~~~~~~~~t~~ka~g~~G---g~v~~~~~~~~~l~~~~~~~~~s  264 (383)
T d1bs0a_         189 IQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQ-KVKPELLVVTFGKGFGVSG---AAVLCSSTVADYLLQFARHLIYS  264 (383)
T ss_dssp             HHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHT-TCCCSEEEEESSSTTSSCC---EEEEECHHHHHHHHHHCHHHHSS
T ss_pred             HHHHHHhcCcEEEeecceeeeecCCcccchHHHc-CCccccccccccccccccc---cccccchhHHHHHHhhchhhhhc
Confidence            9999987 99999999999876544322   222 2234466789999998877   9999999999988765443    


Q ss_pred             CCCcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014594          312 YNVSVAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVM  388 (422)
Q Consensus       312 ~~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~  388 (422)
                      ...++....++.++++   ..+....++++.++..++.+.|+++++ .+.++.++.+.+.+.+...+.++.+.|+++||.
T Consensus       265 ~~~~p~~~aa~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~-~~~~~~s~Ii~v~~g~~~~a~~~~~~L~~~Gi~  343 (383)
T d1bs0a_         265 TSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPF-TLADSCSAIQPLIVGDNSRALQLAEKLRQQGCW  343 (383)
T ss_dssp             BCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSC-EECSCCSSBCCEEEESHHHHHHHHHHHHHTTEE
T ss_pred             ccccchHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcCC-ccCCCCCCEEEEEECCHHHHHHHHHHHHHCCce
Confidence            2445555555555543   223333777888999999999999885 445566776666665334466888999999999


Q ss_pred             EEeCCC---CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          389 IRHYNN---KELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       389 v~~~~~---~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      +.+..+   +.....+||++.   +++++|++.++|+.+
T Consensus       344 v~~~~~PtVp~g~~~lRi~~~a~ht~edid~l~~~L~~~  382 (383)
T d1bs0a_         344 VTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  382 (383)
T ss_dssp             CCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHhc
Confidence            987655   344567999997   677778888777654

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=9.3e-24  Score=204.08  Aligned_cols=319  Identities=15%  Similarity=0.173  Sum_probs=237.3

Q ss_pred             CCCCeEEcCCCC-CCCCCCHHHHHHHhc-C-CCCCCC--C-----Cc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           93 KPEDIVKIDANE-NPYGPPPEVREALGQ-L-KFPYIY--P-----DP-ESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        93 ~~~~~i~l~~~~-~~~~~~~~v~~al~~-~-~~~~~y--~-----~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      ++++++||.+++ -.+..+|+++++..+ + .++..+  +     .. ...+|++++++++|.  +.++++++++++...
T Consensus        43 dG~~~l~f~s~dYLGl~~hp~v~~a~~~a~~~~g~~~~~sr~~~g~~~~~~~lE~~lA~~~g~--e~al~~~SG~~An~~  120 (401)
T d1fc4a_          43 DGSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGM--EDAILYSSCFDANGG  120 (401)
T ss_dssp             TSCEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHT
T ss_pred             CCCEEEEEEccccccccCCHHHHHHHHHHHHHhCCCcccceeeccCcHHHHHHHHHHHHhhcC--CceEEecchhhhhHH
Confidence            567899998764 345668999888765 2 122222  1     22 356899999999995  579999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhh---c--CCCeEEEEeCCCCccCcCCC
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---R--EKPKCIFLTSPNNPDGSIIN  236 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~---~--~~~~~i~l~~p~NPtG~~~~  236 (422)
                      ++.++++++|.|++....|..+...+...++++..++     ..|.+.+++.+.   +  ....+|++.+..+..|.+.+
T Consensus       121 ~i~~l~~~~d~i~~d~~~h~s~~~G~~~~~a~~~~~~-----~~d~~~le~~~~~~~~~~~~~~liv~egv~s~~G~~~~  195 (401)
T d1fc4a_         121 LFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-----NNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIAN  195 (401)
T ss_dssp             THHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEEC-----TTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECC
T ss_pred             HHHHhcCCCcEEEeCCcchHHHHccccccCceEEEEc-----CCChHHHHHHHHHhhhcccCceEEEEcCCCCCCCchhh
Confidence            9999999999999999999998888888999988877     345666665542   2  34456766788889999999


Q ss_pred             HHHHHHHHcC-CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC
Q 014594          237 DEDLLKILEM-PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (422)
Q Consensus       237 ~e~l~~i~~~-~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~  311 (422)
                      .+++.+|++. |+++|+||+|..+..+..   ...... ..+..+++.|++|.+|  |...|++.++.++++.+.....+
T Consensus       196 L~~l~~L~~~~~a~LivDeah~~g~~g~~G~G~~~~~~~~~~~dii~~tl~Ka~g--g~~Gg~v~g~~~~~~~l~~~~~~  273 (401)
T d1fc4a_         196 LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALG--GASGGYTAARKEVVEWLRQRSRP  273 (401)
T ss_dssp             HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTC--SSSCEEEEECHHHHHHHHHHCHH
T ss_pred             hhHHHHHHhhcCcEEEehhhhccccccCCCCccchhccCCCCCeEEEeecccccc--cCCcccccCCHHHHHHHHcCChh
Confidence            9999999997 999999999998775432   222222 2345688999999984  44459999999999988765443


Q ss_pred             ----CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCC
Q 014594          312 ----YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMG  386 (422)
Q Consensus       312 ----~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~g  386 (422)
                          .++++....++..+++.....+ .+++++++.+++++.+...+.. .....++.+.+.+.+.....++.+.|+++|
T Consensus       274 ~~~s~~l~p~~~~aa~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~g~~-~~~~~~pIv~v~~~~~~~a~~~~~~L~~~G  352 (401)
T d1fc4a_         274 YLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAGFT-LAGADHAIIPVMLGDAVVAQKFARELQKEG  352 (401)
T ss_dssp             HHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTTCC-BCCSSSSEEEEEEECHHHHHHHHHHHHHTT
T ss_pred             hhhcCCCCHHHHHHHHhhhcccccCHHHHHHHHHHHHHHHhhhcccCCc-cCCCCCCEEEEEECCHHHHHHHHHHHHHCC
Confidence                3566677777777765432223 7888999999999999988743 345566777777754444567889999999


Q ss_pred             cEEEeCCC---CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          387 VMIRHYNN---KELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       387 I~v~~~~~---~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      |.+.+..+   +.....+||+++   +.+++|++.++++++
T Consensus       353 i~v~~i~~PtVp~g~~~lRi~~~a~hT~edId~~v~al~ev  393 (401)
T d1fc4a_         353 IYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRI  393 (401)
T ss_dssp             EECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             ceEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            99987655   344567999987   566777777777654

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.92  E-value=6.4e-24  Score=203.38  Aligned_cols=317  Identities=20%  Similarity=0.134  Sum_probs=231.0

Q ss_pred             CCCeEEcCCCC-CCCCCCHHHHHHHhc-C-CCCC------CC-CCc-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           94 PEDIVKIDANE-NPYGPPPEVREALGQ-L-KFPY------IY-PDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        94 ~~~~i~l~~~~-~~~~~~~~v~~al~~-~-~~~~------~y-~~~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      ++++++|++|+ -.+..+|+++++..+ + .++.      .+ +.. -..+|++++|+++|.  +..++.+++..+...+
T Consensus        44 ~~~~~~FsSndYLGL~~~p~v~~a~~~al~~yG~gs~~Sr~~~G~~~~h~~LE~~lA~~~g~--e~all~~sG~~An~~~  121 (396)
T d2bwna1          44 KQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQK--EAALVFSSAYNANDAT  121 (396)
T ss_dssp             EEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTC--SEEEEESCHHHHHHHH
T ss_pred             CeEEEEEEcccccCcCCCHHHHHHHHHHHHHhCCCccccccccCCchHHHHHHHHHHHHhCC--CceeeeecchHHHHHH
Confidence            35789998864 455678888877655 2 1111      11 222 257999999999995  4566667777777777


Q ss_pred             HHHh--cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhh---cCCCeEEEEeCCCCccCcCCCH
Q 014594          163 MRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIIND  237 (422)
Q Consensus       163 ~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~~  237 (422)
                      +.++  ..++|.|+...-.|......++..+++++.++.     -|.+.+++.++   +.+.++|++....+.+|.+.|.
T Consensus       122 i~~l~~~~~~d~i~~D~~~Hasi~~g~~ls~a~~~~f~H-----nd~~~l~~l~~~~~~~~~~~iv~egvySmdGd~apl  196 (396)
T d2bwna1         122 LSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRH-----NDVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPI  196 (396)
T ss_dssp             HHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECT-----TCHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCH
T ss_pred             HHHHhcccCCCceeehhhhhhccchhhhccccCceEeec-----chHHHhhhHHhhhcccCceeEEEEeeccCccccccc
Confidence            7766  568899999999999999999999999998873     35666666553   2455677777999999999999


Q ss_pred             HHHHHHHcC-CCeEEEccCCccccCCCc---hhhhhh-cCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC-
Q 014594          238 EDLLKILEM-PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-  311 (422)
Q Consensus       238 e~l~~i~~~-~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~-  311 (422)
                      +++.+|++. |+++++||+|+..+.+..   ...... ..+.+++++||+|++|..|   ||+++++++++.+.....+ 
T Consensus       197 ~~l~~L~~~y~~~L~vDeAHs~Gv~G~~G~G~~~~~~~~~~~di~~gTlsKa~g~~G---g~v~~~~~~i~~l~~~~~~~  273 (396)
T d2bwna1         197 KEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAASARMVDAVRSYAPGF  273 (396)
T ss_dssp             HHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEECHHHHHHHHHHCHHH
T ss_pred             HhHHHHhhhhcceeeeccceeeeeeccccccchhhcCCceeeeeeeecccccccccc---cccchhHHHHHHHHhhcchh
Confidence            999999998 999999999997764332   122211 2345689999999999887   9999999999999876654 


Q ss_pred             -C--CCcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHH-h
Q 014594          312 -Y--NVSVAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-K  384 (422)
Q Consensus       312 -~--~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~-~  384 (422)
                       |  .+++....++.++++   ..++.+.++++..+.+++.+.|..+++. +.++.+..+.+.+.+.....++.+.|+ +
T Consensus       274 ifStalpp~~~aa~~~al~i~~~~~~~~~r~~l~~~~~~~~~~l~~~g~~-~~~~~spIvpv~ig~~~~~~~~a~~lL~e  352 (396)
T d2bwna1         274 IFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGMP-IIDHGSHIVPVVIGDPVHTKAVSDMLLSD  352 (396)
T ss_dssp             HTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHTCC-BCCCSSSCEEEECCCHHHHHHHHHHHHHH
T ss_pred             hhcccCcHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhcCCC-cCCCCCCEEEEEeCCHHHHHHHHHHHHHh
Confidence             3  345555555555444   3344337778888899999999887743 345667777777753334566777765 7


Q ss_pred             CCcEEEeCCC---CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          385 MGVMIRHYNN---KELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       385 ~gI~v~~~~~---~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      +||.+.+..+   +.....+||++.   +.+++|++.++|+++
T Consensus       353 ~Gi~v~~i~~PtVp~g~~rlRi~lsa~ht~edId~l~~~L~~i  395 (396)
T d2bwna1         353 YGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLL  395 (396)
T ss_dssp             HCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred             CCEEEEEECCCcCCCCCeeEEEEeCccCCHHHHHHHHHHHHHh
Confidence            8999987655   345678999986   567788888888876

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.91  E-value=6.8e-23  Score=196.86  Aligned_cols=313  Identities=19%  Similarity=0.188  Sum_probs=211.9

Q ss_pred             EEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCc----------chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH-
Q 014594           98 VKIDANENPYGPPPEVREALGQ-LKFPYIYPDP----------ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC-  165 (422)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~~~----------~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~-  165 (422)
                      |.|+.+.. -++|+.|.+++.+ +......|..          ...+.|+++++++|+++++|++++|+++++..++.. 
T Consensus         3 iyld~a~~-~~~p~~v~ea~~~~~~~~~~np~~~~~~~~~~~~~~~~aR~~ia~l~~~~~~~i~~~~~~T~~l~~~~~~~   81 (376)
T d1eg5a_           3 VYFDNNAT-TRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTV   81 (376)
T ss_dssp             EECBTTTC-CCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHH
T ss_pred             EEEECccc-ccCCHHHHHHHHHHHHHcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCCcEEEECCHHHHHHhhhhcc
Confidence            67776543 3346788888766 2221111211          133568999999999999999999999999998864 


Q ss_pred             ---hcCCCCEEEEcCCCchhHHHH---HHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594          166 ---VLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (422)
Q Consensus       166 ---l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~  239 (422)
                         ...+|+.|++....|+.+...   ++..|++++.+|.+.++.+|+++++++++ ++|+++++++++|+||...+.++
T Consensus        82 ~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~v~~vp~~~~~~id~~~l~~~i~-~~t~lv~is~v~~~tG~~~~~~~  160 (376)
T d1eg5a_          82 AETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVD-EDTFLVSIMAANNEVGTIQPVED  160 (376)
T ss_dssp             HHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCC-TTEEEEEEESBCTTTCBBCCHHH
T ss_pred             cccccccCcccccccccchhhHHHHHHHHhcCCEEEEEcCCCCCeECHHHHHHhcC-CCceEEEEECCccccceeeeehh
Confidence               356788888888888755443   45579999999988888999999999997 79999999999999999999999


Q ss_pred             HHHHHcC---CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC------
Q 014594          240 LLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ------  310 (422)
Q Consensus       240 l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~------  310 (422)
                      +.++++.   ++++++|.++.....    ...+...+.++++.|++|.+|.+|.++  ++.+++..  +.....      
T Consensus       161 i~~~~~~~~~~~~~~vD~~q~~g~~----~~d~~~~~~D~~~~s~~K~~gp~G~~~--l~~~~~~~--~~p~~~g~~~~~  232 (376)
T d1eg5a_         161 VTRIVKKKNKETLVHVDAVQTIGKI----PFSLEKLEVDYASFSAHKFHGPKGVGI--TYIRKGVP--IRPLIHGGGQER  232 (376)
T ss_dssp             HHHHHHHHCTTCEEEEECTTTTTTS----CCCCTTTCCSEEEEEGGGGTSCTTCEE--EEECTTSC--CCCSBCSSCTTT
T ss_pred             hhhhhhhcccCceeEEEeeeccccc----cccccccCccceecccceeecCCCcee--EEeccCcc--cCCcccCCCCcc
Confidence            9999753   899999999874332    112234455689999999887777544  44443311  110000      


Q ss_pred             ---CCCCcHHHHHHHHHHccCC--hHHHHHHHHHHHHHHHHHHHccCCCCcccC---CCceEEEEEeCCCCCHHHHHHHH
Q 014594          311 ---PYNVSVAAEVAACAALQNP--IYLEVKEALIKERERLFKLLKDVPFLNPYP---SYSNFILCEVTSGMDAKKLKDDL  382 (422)
Q Consensus       311 ---~~~~~~~~~~aa~~~L~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p---~~~~f~~~~~~~~~~~~~~~~~L  382 (422)
                         ....+......+.......  .............+++.+.|.........+   .....+.+.++ +.+++.+...|
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L  311 (376)
T d1eg5a_         233 GLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFP-NIRGSTLQNLL  311 (376)
T ss_dssp             TTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECT-TCCHHHHHHHH
T ss_pred             cccCCcccchhhhhHHHHhhccccchhhhhhhhhhhhhhhccccccccccccccccccccceeeeccC-CCCHHHHHHHH
Confidence               1123334443333333221  111155556666777888887765333222   22234455665 67889999999


Q ss_pred             HhCCcEEEeCCCC--------------CC-----CCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          383 AKMGVMIRHYNNK--------------EL-----KGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       383 ~~~gI~v~~~~~~--------------~~-----~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      .++||.++.|...              +.     .++||||++   +.+|+|++.++|+++
T Consensus       312 ~~~gI~vr~G~~c~~~~~~~~~~l~~~gi~~~~~~~~iRiS~~~ynt~edid~l~~~L~~i  372 (376)
T d1eg5a_         312 SGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEI  372 (376)
T ss_dssp             HHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             hhCCeEEeCcchhcCCccchhHHHHHcCCCcccCCCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence            9999999866431              11     247999986   677888888888764

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=99.91  E-value=1.9e-22  Score=195.86  Aligned_cols=319  Identities=19%  Similarity=0.182  Sum_probs=234.0

Q ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHhcC-C--CC--C--CCCC-----cchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHH
Q 014594           94 PEDIVKIDANENPYGPPPEVREALGQL-K--FP--Y--IYPD-----PESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (422)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~--~--~y~~-----~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~  160 (422)
                      ++++|.|+.+... +.|+.+++++.+. .  +.  +  .|..     .-.++.|+.+++++|++ ++.|+++++++++++
T Consensus        20 ~~~~iYld~a~~~-~~p~~v~~~~~~~~~~~~~n~~s~~~~~~~~~~~~~e~aR~~ia~llga~~~~~i~~~~~tt~~~n   98 (408)
T d1t3ia_          20 GHPLVYLDNAATS-QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAIN   98 (408)
T ss_dssp             TEECEECBTTTCC-CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHH
T ss_pred             CCCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCcccEEeecchHHHHH
Confidence            3567999988765 4678888887662 1  11  1  1111     11346899999999996 578999999999999


Q ss_pred             HHHHH----hcCCCCEEEEcCCCchh----HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccC
Q 014594          161 LIMRC----VLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG  232 (422)
Q Consensus       161 ~~~~~----l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG  232 (422)
                      +++..    -.++||+|++.+-.|+.    +...++..|.++..+|.+.+...|.+.+++.++ +++++|.+++.+|-||
T Consensus        99 ~~~~~~~~~~~~~g~~il~s~~e~~s~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~l~~~~~-~~t~lv~i~~~~~~tG  177 (408)
T d1t3ia_          99 LVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLS-EKTKLVTVVHISNTLG  177 (408)
T ss_dssp             HHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCC-TTEEEEEEESBCTTTC
T ss_pred             HHHhhccccccCCCCEEEeecccchhhhhhhhhhhhccCceEeeeeccccccccHHHhhhccC-CCceEEEEeccccccc
Confidence            98875    35789999999988863    334556679999999987777889999999997 7999999999999999


Q ss_pred             cCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHh---
Q 014594          233 SIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---  308 (422)
Q Consensus       233 ~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~---  308 (422)
                      ...|.+++.++++. |+++++|.+++.....-    .+...+.++++.|..|.+|.+  .+|+++.+++........   
T Consensus       178 ~~~p~~~i~~~~~~~g~~~ivDa~q~~g~~~i----d~~~~~~D~~~~s~hK~~gp~--G~g~l~v~~~~~~~~~p~~~g  251 (408)
T d1t3ia_         178 CVNPAEEIAQLAHQAGAKVLVDACQSAPHYPL----DVQLIDCDWLVASGHKMCAPT--GIGFLYGKEEILEAMPPFFGG  251 (408)
T ss_dssp             BBCCHHHHHHHHHHTTCEEEEECTTTTTTSCC----CHHHHTCSEEEEEGGGTTSCT--TCEEEEECHHHHHHSCCCSCS
T ss_pred             ccCcHHHHhhhhhccCceeeeccceecccccc----cccccCCceEEeccccccCCC--CccccccchhhhhcCCceecC
Confidence            99999999999987 99999999988433211    122233458889999965544  489999999987654211   


Q ss_pred             --------------------cCCCCCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCccc------C
Q 014594          309 --------------------KQPYNVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPY------P  359 (422)
Q Consensus       309 --------------------~~~~~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~------p  359 (422)
                                          ....+.+.....++..+++--  ...+ +.++..+..+++.+.+.+.+...+.      .
T Consensus       252 ~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~  331 (408)
T d1t3ia_         252 GEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHG  331 (408)
T ss_dssp             TTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGS
T ss_pred             CcccccccccccccCCchhhhcCCcHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHhHHhhhhccCccccccCCCcccc
Confidence                                112355666666666666431  1223 6677778888999999888655432      1


Q ss_pred             CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          360 SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       360 ~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~--------~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      ..+..+.+.++ +.+.+++...|.++||.++.|..        .+..+.+|||+.   +.+|+|++.++|+++
T Consensus       332 ~~~~iv~f~~~-~~~~~~v~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~vRiS~~~ynt~~did~li~~L~~~  403 (408)
T d1t3ia_         332 DRAALASFNVA-GLHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQAT  403 (408)
T ss_dssp             CBCSEEEEEET-TBCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             CcceEEEEEeC-CCCHHHHHHHHhhCCcEEecCcccccHHHHhhcCCccEEEECCCCCCHHHHHHHHHHHHHH
Confidence            23456667776 67899999999999999987654        134678999986   577788888887753

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.2e-22  Score=194.01  Aligned_cols=311  Identities=14%  Similarity=0.120  Sum_probs=227.2

Q ss_pred             CCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch
Q 014594          105 NPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT  181 (422)
Q Consensus       105 ~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~~~~-~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~  181 (422)
                      .|...+++|+++|.....+|+-++.  -..+.|+.+++++|++.+ .|+++.|+|++++.++..++.+|+++++....+.
T Consensus        26 GP~~~~~~Vl~am~~~~i~HRs~~f~~i~~ea~~~l~~llg~~~~~~ii~~gsgT~a~~~~i~~l~~~~~~~~~~~~~~~  105 (388)
T d1h0ca_          26 GPSNLPPRIMAAGGLQMIGSMSKDMYQIMDEIKEGIQYVFQTRNPLTLVISGSGHCALEAALVNVLEPGDSFLVGANGIW  105 (388)
T ss_dssp             SCCCCCHHHHHHHTCCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCSSCCEEECBSSHH
T ss_pred             CCCCCCHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHhhccCCceeeecccce
Confidence            4556689999999874444554433  267899999999998654 6899999999999999999999999999988886


Q ss_pred             hH--HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcc
Q 014594          182 MY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE  258 (422)
Q Consensus       182 ~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~  258 (422)
                      ..  ...+...+..++.+..+.+..+|.+.+++.+.+.+++++++++.+|.||.+.|.+++.++++. |+++++|.+++.
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~n~tG~i~pi~~i~~~~~~~g~~~~vD~~qs~  185 (388)
T d1h0ca_         106 GQRAVDIGERIGARVHPMTKDPGGHYTLQEVEEGLAQHKPVLLFLTHGESSTGVLQPLDGFGELCHRYKCLLLVDSVASL  185 (388)
T ss_dssp             HHHHHHHHHHHC--CBCCBCCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHTTTCEEEEECTTTT
T ss_pred             eeeeccccccccccccccccCCccccchHHHHHHhccCCcceEEEeeeeeccccccCHHHHHHHhhcccccceecccccc
Confidence            43  344555777777777777778999999988876799999999999999999999999999998 999999999884


Q ss_pred             ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcC-------------------------CCC
Q 014594          259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-------------------------PYN  313 (422)
Q Consensus       259 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~-------------------------~~~  313 (422)
                      ....    ..+...+.++++.|..|.++.++ .+|+++.+++.++.+.....                         ..+
T Consensus       186 g~~~----~d~~~~~~D~~~~s~~K~~~gp~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t  260 (388)
T d1h0ca_         186 GGTP----LYMDRQGIDILYSGSQKALNAPP-GTSLISFSDKAKKKMYSRKTKPFSFYLDIKWLANFWGCDDQPRMYHHT  260 (388)
T ss_dssp             TTSC----CCTTTTTCSEEEEESSSTTCCCT-TCEEEEECHHHHHHHTTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCSC
T ss_pred             cccc----ccccccccceecccccccccCCC-ceEEEeecHHHHHhhhhccccccccccccchhhhhhhhcccccccccc
Confidence            3321    12223444578888889775443 47888888888776542111                         123


Q ss_pred             CcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC----CceEEEEEeCCCCCHHHHHHHHH-hC
Q 014594          314 VSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPS----YSNFILCEVTSGMDAKKLKDDLA-KM  385 (422)
Q Consensus       314 ~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~----~~~f~~~~~~~~~~~~~~~~~L~-~~  385 (422)
                      ++.....++.+++..  ...++ +.++..+..+++++.+...+.....+.    ....+.+.+|++.+++++.+.|+ ++
T Consensus       261 ~~~~~~~~~~~al~~~~~~g~~~~~~~~~~l~~~l~~~~~~~g~~~~~~~~~~rs~~i~~~~~p~~~~~~~~~~~L~~~~  340 (388)
T d1h0ca_         261 IPVISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQALGLQLFVKDPALRLPTVTTVAVPAGYDWRDIVSYVIDHF  340 (388)
T ss_dssp             CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECCTTCCHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHhhcCcccccCCHHHcCCeEEEEECCCCCCHHHHHHHHHhcC
Confidence            444444445454432  12234 667777888888888887765443222    12456788888899999999987 66


Q ss_pred             CcEEEeCCCCCCCCeEEEE-ec---ChhhHHHHHHHHhh
Q 014594          386 GVMIRHYNNKELKGYVRVS-VG---KPEHTDALMECLMH  420 (422)
Q Consensus       386 gI~v~~~~~~~~~~~iRis-~~---~~~~~~~l~~al~~  420 (422)
                      ||.++.|.....++.|||| ++   +.+++|++.++|+.
T Consensus       341 gI~v~~G~~~~~~~~iRis~~g~~~t~edid~li~aL~~  379 (388)
T d1h0ca_         341 DIEIMGGLGPSTGKVLRIGLLGCNATRENVDRVTEALRA  379 (388)
T ss_dssp             CEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred             CEEEeCCchhhcCCEEEEeCCCCCCCHHHHHHHHHHHHH
Confidence            9999988765556799999 54   45677777777765

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=99.90  E-value=5.4e-22  Score=184.84  Aligned_cols=313  Identities=13%  Similarity=0.077  Sum_probs=205.3

Q ss_pred             EcCCCCCCCCCCHHHHHHHhcC--CCCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 014594           99 KIDANENPYGPPPEVREALGQL--KFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVD  175 (422)
Q Consensus        99 ~l~~~~~~~~~~~~v~~al~~~--~~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~  175 (422)
                      +| .|+|+++++|+|++|+.+.  .+..+| +++..+++|+++++++|.++++|++|+|+++++..++..++.+++.+++
T Consensus         3 ~f-~nd~~~g~~P~v~eAl~~~~~~~~~~y~~~~~~~~lr~~ia~~~g~~~~~v~~tsggtean~~a~~~~~~~~~~~~~   81 (340)
T d1svva_           3 SF-VNDYSVGMHPKILDLMARDNMTQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLALRPWEAVIA   81 (340)
T ss_dssp             EC-SCSCSSCCCHHHHHHHHHHTTCCCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHCCTTEEEEE
T ss_pred             Cc-ccCCCCCCCHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHHhhhcccccc
Confidence            45 4689999999999999873  344567 4566789999999999998899999999999999999999999999999


Q ss_pred             cCCCchhHHHH--HHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeEEEEeCCCCccCcCCCHHHHHHHHcC--
Q 014594          176 CPPTFTMYEFD--AAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM--  246 (422)
Q Consensus       176 ~~p~y~~~~~~--~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~--  246 (422)
                      ..+.+..+...  ....+.....+..... ..+.+........     .....++++.+.|..|.+.+.+++..++..  
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (340)
T d1svva_          82 TQLGHISTHETGAIEATGHKVVTAPCPDG-KLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISASCK  160 (340)
T ss_dssp             ETTSHHHHSSTTHHHHTTCCEEEECCTTS-CCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHH
T ss_pred             ccccceeeeecccccccceeeeecccccc-cccchhHHHHhhhhhcccCCcceeeeecccccccccccHHHhhhhhcccc
Confidence            99888655322  2224444444443222 3344433333321     123345555555567778888887766553  


Q ss_pred             --CCeEEEccCCcccc--CCC--chhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHH----HHhcCCCCCcH
Q 014594          247 --PILVVLDEAYTEFS--GLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL----WRAKQPYNVSV  316 (422)
Q Consensus       247 --~~~li~Deay~~~~--~~~--~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l----~~~~~~~~~~~  316 (422)
                        +.++++|++|....  ...  ........ ...+...+..|..+..  +.++...........    ...........
T Consensus       161 ~~g~~~~~d~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (340)
T d1svva_         161 EHGLYLFLDGARLASALSSPVNDLTLADIAR-LTDMFYIGATKAGGMF--GEALIILNDALKPNARHLIKQRGALMAKGW  237 (340)
T ss_dssp             HHTCEEEEECTTHHHHHTSTTCCCCHHHHHH-HCSEEEEECTTTTCSS--CEEEEECSGGGCTTHHHHHHHTTCCCTTTH
T ss_pred             cccceeeeeccceeeeecccccccccccccc-cceeeecCCccccccc--cccccccchhhhhhhhhhcccccCccchhh
Confidence              99999999996432  111  11111111 1224444455544333  344445443332222    22223344455


Q ss_pred             HHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCC
Q 014594          317 AAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE  396 (422)
Q Consensus       317 ~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~  396 (422)
                      ...+++...++...+....++...+++++.+.|++.++..+.|++++++++.++     .++.+.|.++++.........
T Consensus       238 ~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~v~~~~~-----~~~~~~l~~~~~~~~~~~~~~  312 (340)
T d1svva_         238 LLGIQFEVLMKDNLFFELGAHSNKMAAILKAGLEACGIRLAWPSASNQLFPILE-----NTMIAELNNDFDMYTVEPLKD  312 (340)
T ss_dssp             HHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEECBEEE-----HHHHHHHTTTEECEEEEEETT
T ss_pred             HHHHHHHHHhhhhHHHHHHHHHHHHHhhhHHHHhcCCCeeecCCCceEEEEeCC-----HHHHHHHHHhhhhhcccccCC
Confidence            566666677776666667778888999999999999876677899999999885     355667766655433322234


Q ss_pred             CCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          397 LKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       397 ~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      .++++||+++   +++++|++.++|++|
T Consensus       313 ~~~~vR~s~~~~~t~edid~~l~~l~~l  340 (340)
T d1svva_         313 GTCIMRLCTSWATEEKECHRFVEVLKRL  340 (340)
T ss_dssp             TEEEEEEECCTTCCHHHHHHHHHHHHHC
T ss_pred             CCcEEEEECCCCCCHHHHHHHHHHHhcC
Confidence            4789999876   677888888888875

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.89  E-value=2.6e-22  Score=188.75  Aligned_cols=311  Identities=17%  Similarity=0.200  Sum_probs=208.0

Q ss_pred             eEEcCCCCCCCCCCHHHHHHHhcCCCC-CCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 014594           97 IVKIDANENPYGPPPEVREALGQLKFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV  174 (422)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~~~~-~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl  174 (422)
                      +|||.+ ++-..|+|++++|+.+...+ ..| +++...+|++++|+++|.  +++++++||++|+..++++++++||.++
T Consensus         1 ~~~~~~-~~~t~p~p~v~~A~~~a~~g~~~yg~~p~~~~le~~lA~~~G~--~~~~~~~sGt~A~~~al~a~~~~g~~~~   77 (343)
T d1m6sa_           1 MIDLRS-DTVTKPTEEMRKAMAQAEVGDDVYGEDPTINELERLAAETFGK--EAALFVPSGTMGNQVSIMAHTQRGDEVI   77 (343)
T ss_dssp             CEECSC-GGGCCCCHHHHHHHHTCCCCCGGGTCCHHHHHHHHHHHHHTTC--SEEEEESCHHHHHHHHHHHHCCTTCEEE
T ss_pred             Cccccc-ccCCCCCHHHHHHHHhhhcCCcccCCCHHHHHHHHHHHHHHCC--CeEEEeCCHHHHHHHHHHHHhccCCcee
Confidence            367744 33233478999999875432 335 778889999999999995  4789999999999999999999999999


Q ss_pred             EcCCCchhHH---HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-----CCCeEEEE-eCCCCccCcCCCHHHHHHHHc
Q 014594          175 DCPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFL-TSPNNPDGSIINDEDLLKILE  245 (422)
Q Consensus       175 ~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i~l-~~p~NPtG~~~~~e~l~~i~~  245 (422)
                      +..+.+..+.   ..+...+..+..++.+ ....|++.+++.+..     .++..+++ +.++|+.|.+.+.+++.+|++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~  156 (343)
T d1m6sa_          78 LEADSHIFWYEVGAMAVLSGVMPHPVPGK-NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICT  156 (343)
T ss_dssp             EETTCHHHHSSTTHHHHHTCCEEEEECEE-TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHH
T ss_pred             ccccccceeeecccccccccceeeccccc-cCccCHHHHHHhhhhhhcccccccccccccccccCCceecCHHHHHHHHH
Confidence            9999886443   3444566777777643 346799999998863     23344444 478899999999999999886


Q ss_pred             C----CCeEEEccCCccccCCC--chhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC--CCC--c
Q 014594          246 M----PILVVLDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNV--S  315 (422)
Q Consensus       246 ~----~~~li~Deay~~~~~~~--~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~--~~~--~  315 (422)
                      .    ++++++|++|..+....  .............+. +.+|  +..|.+.|++++..+.+.........  ++.  .
T Consensus       157 ~~~~~g~~~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (343)
T d1m6sa_         157 IAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMF-CLSK--GLCAPVGSVVVGDRDFIERARKARKMLGGGMRQA  233 (343)
T ss_dssp             HHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEE-ESSS--TTCCSSCEEEEECHHHHHHHHHHHHHHTCCCSST
T ss_pred             HHHhcCeEEEeccccccccccccccchhhhccccccccc-cccc--cccccccccccccHHHHhhhHhhCcccccccchh
Confidence            4    99999999998654211  111111122222333 3333  34566788889888887766554332  222  2


Q ss_pred             HHHHHHHHHHc-cCChHHHHHHHHHHHHHHHHHHHccCCCC-cccCCCceEEEEEeCC-CCCHHHHHHHHHhCCcEEEeC
Q 014594          316 VAAEVAACAAL-QNPIYLEVKEALIKERERLFKLLKDVPFL-NPYPSYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRHY  392 (422)
Q Consensus       316 ~~~~~aa~~~L-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~p~~~~f~~~~~~~-~~~~~~~~~~L~~~gI~v~~~  392 (422)
                      .....+..... ....+.   +...++..++.+.+.+++.. ...|.++++++++++. +.++.++.+.|+++||.+++.
T Consensus       234 ~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~l~~~L~~~Gi~v~~~  310 (343)
T d1m6sa_         234 GVLAAAGIIALTKMVDRL---KEDHENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLKVNAHGFIEALRNSGVLANAV  310 (343)
T ss_dssp             HHHHHHHHHHHHHSSTTH---HHHHHHHHHHHHHHHHHTCBCCGGGCCSSEEEEECTTSSSCHHHHHHHHHHHTEECEEE
T ss_pred             HHHHHhhhhhhhhhHHHH---HHHHHHHHHhhhHHHHhccCccCCCCCceEEEEEeCCCcccHHHHHHHHHHCCCEEecC
Confidence            22222222111 112222   23334444555555544333 3456778999999874 567899999999999999986


Q ss_pred             CCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          393 NNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       393 ~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      .    .+++||+++   +++++|++.++++++
T Consensus       311 ~----~~~iRi~~~~~~t~edid~~v~~l~~v  338 (343)
T d1m6sa_         311 S----DTEIRLVTHKDVSRNDIEEALNIFEKL  338 (343)
T ss_dssp             E----TTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             C----CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence            5    578999886   466777777777764

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.88  E-value=4.1e-20  Score=173.32  Aligned_cols=314  Identities=13%  Similarity=0.080  Sum_probs=212.3

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcC--CCCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE
Q 014594           96 DIVKIDANENPYGPPPEVREALGQL--KFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK  172 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~--~~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~  172 (422)
                      +.++|. ++|.++.+|+|++|+.+.  .+...| +++...++|+.+++++|. +..+++|+|+++++..++..++.+++.
T Consensus         3 ~~~~f~-s~n~~g~~P~v~~A~~~a~~~~~~~~~~~~~~~~l~~~la~~~g~-~~~v~f~~sGt~An~~a~~~~~~~~~~   80 (345)
T d1v72a1           3 PALGFS-SDNIAGASPEVAQALVKHSSGQAGPYGTDELTAQVKRKFCEIFER-DVEVFLVPTGTAANALCLSAMTPPWGN   80 (345)
T ss_dssp             CCCBCS-CGGGCCCCHHHHHHHHHTTSSCCCSTTCSHHHHHHHHHHHHHHTS-CCEEEEESCHHHHHHHHHHTSCCTTEE
T ss_pred             CCcCcC-CCCCCCCCHHHHHHHHHHhccCccccCCCHHHHHHHHHHHHHHCC-CcEEEECCchHHHHHHHHHHHHhcCCc
Confidence            457887 478888999999999873  333445 666788999999999996 457999999999999999998998888


Q ss_pred             EEEcCCCchhHH---HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-----CCeE-EEEeCCCCccCcCCCHHHHHHH
Q 014594          173 IVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKC-IFLTSPNNPDGSIINDEDLLKI  243 (422)
Q Consensus       173 Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~-i~l~~p~NPtG~~~~~e~l~~i  243 (422)
                      +++....+....   ......+..+..++...+...+++.+++.+.+.     .+.. ++.+++.|+.|...+.+++.++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  160 (345)
T d1v72a1          81 IYCHPASHINNDECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTREKVGDVHTTQPACVSITQATEVGSIYTLDEIEAI  160 (345)
T ss_dssp             EEECTTSHHHHSSTTHHHHHTTSCEEEECCCGGGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCTTSCCCCHHHHHHH
T ss_pred             cccccccceeeechhhHHHhcCcccccccccccccccHHHhhhhhcccccccccccceeeeeeccccccccccchhhhhH
Confidence            887777664332   233446777777776667789999999998632     2333 4444788899999999888887


Q ss_pred             HcC----CCeEEEccCCccccCCC----chhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHH--hcCC--
Q 014594          244 LEM----PILVVLDEAYTEFSGLE----SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQP--  311 (422)
Q Consensus       244 ~~~----~~~li~Deay~~~~~~~----~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~--~~~~--  311 (422)
                      ++.    |+++++|+++..+....    ...... .........+..|..+ .+.+. .+............  ....  
T Consensus       161 ~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~  237 (345)
T d1v72a1         161 GDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTW-KAGVDALSFGATKNGV-LAAEA-IVLFNTSLATEMSYRRKRAGHL  237 (345)
T ss_dssp             HHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTG-GGTCCEEEECCGGGTC-SSCEE-EEESSGGGHHHHHHHHHHTTCC
T ss_pred             HHHHHhcCceeeecccccceeccccccCHHHhhc-cccccccccCcccccc-ccccc-cccchhhhhhhccccccccccc
Confidence            553    99999999997543111    111111 1122233444444332 22222 22333322222211  1112  


Q ss_pred             CCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcc-cCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEE
Q 014594          312 YNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIR  390 (422)
Q Consensus       312 ~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~  390 (422)
                      .........++...+.+..+.....+..++.+++.+.+.+++++.+ .|.++++++++++     .++.+.|+++||.+.
T Consensus       238 ~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~p~~~niv~~~~~-----~~~~~~L~~~gi~v~  312 (345)
T d1v72a1         238 SSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD-----SAMIDALLKAGFGFY  312 (345)
T ss_dssp             CSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC-----HHHHHHHHHTTCBCB
T ss_pred             cchhhHHhhhhHHHHHHhhhhhhccchhhHHHHHHHHHHhcCCcEeccCCCccEEEEEcC-----HHHHHHHHHcCCCcc
Confidence            2333444444455555555544666677888888899999887764 5778899999985     467888999999886


Q ss_pred             eCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          391 HYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       391 ~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      ...  ..++.+||+++   +.+++|++.++|++.
T Consensus       313 ~~~--~~~~~lR~~~~~~~T~edid~~le~lr~a  344 (345)
T d1v72a1         313 HDR--WGPNVVRFVTSFATTAEDVDHLLNQVRLA  344 (345)
T ss_dssp             CSS--SSTTEEEEECCTTCCHHHHHHHHHHHHHT
T ss_pred             ccC--CCCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence            543  34689999987   677788888888764

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.86  E-value=1.7e-20  Score=177.63  Aligned_cols=305  Identities=15%  Similarity=0.126  Sum_probs=216.2

Q ss_pred             CCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCch
Q 014594          104 ENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT  181 (422)
Q Consensus       104 ~~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~  181 (422)
                      ..|...+++|+++|.+...+++-++.  -..+.++.++++++.+.+.+++++|+|.++++++..++.+||+|++....+.
T Consensus         6 PGP~~v~~~V~~am~~~~~~hr~~~f~~i~~~~~~~l~~ll~~~~~~i~~~gsgT~a~e~~~~nl~~~g~~vlv~~~G~f   85 (348)
T d1iuga_           6 PGPVRLHPKALEALARPQLHHRTEAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGKF   85 (348)
T ss_dssp             SSSCCCCHHHHHHHHSCCCCTTSHHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHH
T ss_pred             CCCCCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHhcccccccceeecchHH
Confidence            34667789999999874333433322  2568899999999987778999999999999999999999999888776643


Q ss_pred             --hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC---CCeEEEccCC
Q 014594          182 --MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAY  256 (422)
Q Consensus       182 --~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~---~~~li~Deay  256 (422)
                        .+...++.+|.++..+..+.+..++++.+    ...+++.++++|..+.||...+.+++.++++.   +.++++|.+.
T Consensus        86 ~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~v~~~h~eTstG~~~~i~~i~~~~~~~~~~~l~~vDavs  161 (348)
T d1iuga_          86 SERFYEIALEAGLVVERLDYPYGDTPRPEDV----AKEGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVT  161 (348)
T ss_dssp             HHHHHHHHHHTTCEEEEEECCTTCCCCTTTS----CCSSCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTT
T ss_pred             HHHHHHHHHhcCcccccccccCCCccccccc----cccCCCeeEEEecchhhhhhccHHHHHHHHHhhhccceeechhhh
Confidence              45566778898888888666555555432    33688999999999999999999999999975   6889999988


Q ss_pred             ccccCCCchhhhhhcCCcEEEEccChhhh-ccccccceeeecCHHHHHHHHH----------------hcCCCCCcHHHH
Q 014594          257 TEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWR----------------AKQPYNVSVAAE  319 (422)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~r~G~i~~~~~~~~~l~~----------------~~~~~~~~~~~~  319 (422)
                      +.....-    .++..+-++++.|-.|.+ |.+|  +|+++++++.++++..                -..+++++....
T Consensus       162 s~g~~~i----~~d~~~iD~~~~~sqK~l~gppG--~~~v~~s~~~le~~~~~~~~~dl~~~~~~~~~~~~~~Tp~v~~i  235 (348)
T d1iuga_         162 SLLVGEV----ALEAMGVDAAASGSQKGLMCPPG--LGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLV  235 (348)
T ss_dssp             TBTTBCC----CSGGGTCSEEEEESSSTTCCCSC--EEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHH
T ss_pred             ccccccc----ccccccCCEEEeccccceecCCc--eeeeeechHHHhhhcccccccchhhhhhhhccCcccccccchHH
Confidence            7543211    122334458888899998 7777  7999999888775321                122467788788


Q ss_pred             HHHHHHccC--ChHHHHHHHHHHHHHHHHHHHccCCCCcccCCC-c-eEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC
Q 014594          320 VAACAALQN--PIYLEVKEALIKERERLFKLLKDVPFLNPYPSY-S-NFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK  395 (422)
Q Consensus       320 ~aa~~~L~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~-~-~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~  395 (422)
                      +++.++|+.  .++.+..++.+..++.+.+.++..+ +...+.. + ..+.+.+|++.+..++.+.|.++||.+.+|...
T Consensus       236 ~~l~~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-l~~~~~~~s~~v~~~~~P~g~~~~~~~~~l~~~gi~i~~G~~~  314 (348)
T d1iuga_         236 LAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEGG-LRPVPKRFSPAVAAFYLPEGVPYARVKEAFAQRGAVIAGGQGP  314 (348)
T ss_dssp             HHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHTT-CEESCSSBCTTCEEEECCTTCCHHHHHHHHHTTTEECEECCGG
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhh-hccChhhcCCeEEEEECCCCCCHHHHHHHHHHCCeEEEcCccc
Confidence            888888763  2332333333334445555555554 3333322 2 246788898999999999999999999887655


Q ss_pred             CCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          396 ELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       396 ~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      ..+..+||+..   ...+++.+.++++
T Consensus       315 l~~~~~RIg~mG~~~~~d~~~~~~~l~  341 (348)
T d1iuga_         315 LKGKVFRLSLMGAYDRYEALGVAGMFR  341 (348)
T ss_dssp             GTTTEEEECCCSSCCHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence            45578999854   3444445444444

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.86  E-value=4.1e-20  Score=177.58  Aligned_cols=308  Identities=15%  Similarity=0.099  Sum_probs=218.7

Q ss_pred             CCCCCCHHHHHHHhcCCCCCCCCCcc--hHHHHHHHHHHcCC----CCCCEEEeCCHHHHHHHHHHHhc---CCCCEEEE
Q 014594          105 NPYGPPPEVREALGQLKFPYIYPDPE--SRRLRAALAKDSGL----ESDHILVGCGADELIDLIMRCVL---DPGDKIVD  175 (422)
Q Consensus       105 ~~~~~~~~v~~al~~~~~~~~y~~~~--~~~lr~~la~~~~~----~~~~i~~~~G~~~al~~~~~~l~---~~gd~Vl~  175 (422)
                      .|.+.+++|++||.....+++-++..  ..++++.+.+.++.    +++.|++|+|+|++++.++..++   ++||+|++
T Consensus        10 GP~~v~~~V~~Am~~~~~~hr~~~f~~~~~~~~~~~r~~~~~~~~~~~~~i~~t~sgT~a~~~~~~~l~~~~~~gd~vlv   89 (382)
T d2bkwa1          10 GPIILSGAVQKALDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLV   89 (382)
T ss_dssp             SSCCCCHHHHHTTSCCCCCTTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEE
T ss_pred             CCCCCCHHHHHHhCcccCCCCcHHHHHHHHHHHHHHHHHHhhhcCCCCeEEEEeCcHHHHHHHHHHHHHHhcCCCCceEE
Confidence            45566899999987643334433332  45677777777753    55679999999999999999986   57999998


Q ss_pred             cCCCchh--HHHHHHHcCCEEEEec-CCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC---CCe
Q 014594          176 CPPTFTM--YEFDAAVNGAAVVKVP-RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PIL  249 (422)
Q Consensus       176 ~~p~y~~--~~~~~~~~g~~~~~v~-~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~---~~~  249 (422)
                      ..-.+..  +...++..|..+..+. .+.+...+.+.+++.+.+.+++++++++.+|.||...+.+++.++++.   +++
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~~~~~~~~~~~~~~~~~  169 (382)
T d2bkwa1          90 VSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETF  169 (382)
T ss_dssp             ECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSE
T ss_pred             EEechhhhhhhhhccccccccccccccCCCCccchhHHHHHhhhccchheeeeeccccccccccchhhhhhcccccccee
Confidence            8877653  3455666888877765 455667889999998877889999999999999999999999998764   799


Q ss_pred             EEEccCCccccCCCchhhhhhcCCcEEEEccChhhh-ccccccceeeecCHHHHHHHHHh--------------------
Q 014594          250 VVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRA--------------------  308 (422)
Q Consensus       250 li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~r~G~i~~~~~~~~~l~~~--------------------  308 (422)
                      +++|.+++....    .-.+...+-++++.|-.|.+ |.+|  +|+++.+++.++.+...                    
T Consensus       170 ~~vDa~qs~g~~----pid~~~~giD~~~~s~~K~l~gP~G--~g~l~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (382)
T d2bkwa1         170 FVVDAVCSIGCE----EFEFDEWGVDFALTASQKAIGAPAG--LSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIM  243 (382)
T ss_dssp             EEEECTTTTTTS----CCCTTTTTCSEEEEESSSTTCCCSC--EEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHH
T ss_pred             eeeecccccccc----cccccccCeeEEeecccccCcCCCc--hhhhhccHHHHhhhhhcccCCCcccchhhhhhhhhhh
Confidence            999999884332    11222344558888999988 5566  79999999887654311                    


Q ss_pred             --------cCCCCCcHHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcc---cCCC---ceEEEEEeCC
Q 014594          309 --------KQPYNVSVAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNP---YPSY---SNFILCEVTS  371 (422)
Q Consensus       309 --------~~~~~~~~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~---~p~~---~~f~~~~~~~  371 (422)
                              ..+++++....+++.++|+.  .+..+ ..++.++.++++++.+........   .++.   ...+.+.++ 
T Consensus       244 ~~~~~~~~~~~~Tp~~~~i~al~~aL~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~s~~v~~~~~~-  322 (382)
T d2bkwa1         244 ENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTAVYVA-  322 (382)
T ss_dssp             HHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSCEEEECS-
T ss_pred             hcccccccccccCCcHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhhhcccccccccCchhccCCcEEEEcCC-
Confidence                    11346777777777777754  12233 666677788888888876432221   1221   123456665 


Q ss_pred             CCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEE-ec---ChhhHHHHHHHHhhh
Q 014594          372 GMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVS-VG---KPEHTDALMECLMHL  421 (422)
Q Consensus       372 ~~~~~~~~~~L~~~gI~v~~~~~~-~~~~~iRis-~~---~~~~~~~l~~al~~l  421 (422)
                        +..++.+.|.++||.+..|... ..++.|||+ ++   +.++++.+.++++.+
T Consensus       323 --~~~~~~~~L~~~gi~i~~G~~~~~~~~~~Ri~~~G~~~~~e~i~~l~~~l~~i  375 (382)
T d2bkwa1         323 --DPPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLI  375 (382)
T ss_dssp             --CHHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHH
T ss_pred             --CHHHHHHHHHHCCeEEECCCChhhcCCEEEEeCCcCCCCHHHHHHHHHHHHHH
Confidence              5788999999999999987653 446789999 54   345567787777654

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=99.85  E-value=2.3e-19  Score=171.71  Aligned_cols=313  Identities=16%  Similarity=0.132  Sum_probs=222.4

Q ss_pred             CCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCCCC-CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCc
Q 014594          104 ENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF  180 (422)
Q Consensus       104 ~~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~~~-~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y  180 (422)
                      ..|.+.+++|++||......|+-+..  -..+.|+.++++++.+. ..|++++|++.+++.++..++.+|+++++..-.+
T Consensus        24 PGP~~v~~~Vl~am~~~~~~hr~~ef~~i~~~~r~~l~~ll~~~~~~~i~~~g~gT~~~~~~~~~~~~~~~~~~~~~~~~  103 (377)
T d1vjoa_          24 PGPSNAHPSVLQAMNVSPVGHLDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAGY  103 (377)
T ss_dssp             SSCCCCCHHHHHHHSSCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSH
T ss_pred             CCCCCCCHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCeEEEEcCcHHHHHHHHHHhccccccccceeeech
Confidence            35666789999999765443432332  26789999999999854 4677888899999999999999999998887777


Q ss_pred             h--hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCc
Q 014594          181 T--MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT  257 (422)
Q Consensus       181 ~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~  257 (422)
                      .  .+...+...+.....+..+.+...+.+..+....+.+++++.+++.+|.||...+.+++.++++. |.++++|.+++
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~i~~i~~~~~~~g~~~~vDa~~~  183 (377)
T d1vjoa_         104 FGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTS  183 (377)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTT
T ss_pred             hhhhhhhhhhhhcccccccccCCCCcccchhhhhhhhcCcceeeeeeeeeccceeeechhhhhhhhhhccceEEEecchh
Confidence            5  33445556777777777656666777777777666789999999999999999999999999987 99999999997


Q ss_pred             cccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCC----------------------CCCc
Q 014594          258 EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----------------------YNVS  315 (422)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~----------------------~~~~  315 (422)
                      .....    ..++..+.++++.|..|.++.++ .+|+++.++..++........                      .+.+
T Consensus       184 ~g~~~----~~~~~~~~d~~~~s~~K~~~gp~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (377)
T d1vjoa_         184 LGGVP----IFLDAWGVDLAYSCSQKGLGCSP-GASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAP  258 (377)
T ss_dssp             TTTSC----CCTTTTTCSEEECCSSSTTCSCS-SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCC
T ss_pred             hhhhh----hcccccccceeeecccccccCCC-EEEEecchhhHHhhhhccCCCCcceeeccchhhhccCcccccccccc
Confidence            43221    11223445578888899765333 478888888888765532211                      1223


Q ss_pred             HHHHHHHHHHccC--ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC---CceEEEEEeCCCCCHHHHHHHHH-hCCcE
Q 014594          316 VAAEVAACAALQN--PIYLE-VKEALIKERERLFKLLKDVPFLNPYPS---YSNFILCEVTSGMDAKKLKDDLA-KMGVM  388 (422)
Q Consensus       316 ~~~~~aa~~~L~~--~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~~f~~~~~~~~~~~~~~~~~L~-~~gI~  388 (422)
                      .....++..++..  .+..+ ..++.+++.+++.+.+...+...+.+.   ....+.+.+|++.+.+++.+.|. ++||.
T Consensus       259 ~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~rs~~v~~~~~p~~~~~~~l~~~L~~~~gI~  338 (377)
T d1vjoa_         259 INLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPDGVDGKAVARRLLNEHNIE  338 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHCEE
T ss_pred             eechhhhHHHHhhhhhcCchHHHHHHHHHhhhhhhhhhccCceeecChHhcCCeEEEEECCCCCCHHHHHHHHHhcCCEE
Confidence            3333333333322  12233 677778888888999887765433221   22345677888889999999886 77999


Q ss_pred             EEeCCCCCCCCeEEEE-ec---ChhhHHHHHHHHhhh
Q 014594          389 IRHYNNKELKGYVRVS-VG---KPEHTDALMECLMHL  421 (422)
Q Consensus       389 v~~~~~~~~~~~iRis-~~---~~~~~~~l~~al~~l  421 (422)
                      +..|.....++.|||| ++   +.+++++|.++|+++
T Consensus       339 v~~G~~~~~~~~~Ris~~g~~~t~edi~~lv~al~~~  375 (377)
T d1vjoa_         339 VGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQV  375 (377)
T ss_dssp             CEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred             EecCcccccCCEEEEecCcCCCCHHHHHHHHHHHHHH
Confidence            9887765556799999 34   466788888888763

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=99.85  E-value=1.4e-19  Score=174.00  Aligned_cols=312  Identities=15%  Similarity=0.122  Sum_probs=218.6

Q ss_pred             CCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHcCCCCCC-EEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCc
Q 014594          104 ENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESDH-ILVGCGADELIDLIMRCVLDPGDKIVDCPPTF  180 (422)
Q Consensus       104 ~~~~~~~~~v~~al~~~~~~~~y~~~--~~~~lr~~la~~~~~~~~~-i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y  180 (422)
                      ..|...+++|++||.....+++-++.  -..+.|+.|+++++++... |+++.|+|.+++.++..++.+|++|++..-.+
T Consensus        23 PGP~~~~~~V~~Am~~~~~~hr~~ef~~i~~~~r~~L~~ll~~~~~~~i~~~gsgT~a~ea~~~~l~~~~~~vl~~~~g~  102 (388)
T d2ch1a1          23 PGPSNCSKRVLTAMTNTVLSNFHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGI  102 (388)
T ss_dssp             SSSCCCCHHHHHHTTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSH
T ss_pred             CCCCCCCHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCeEEEEcCcHHHHHHHHHHHhcccccccccccccc
Confidence            35566689999999875433443332  2578999999999986555 55677899999999999999999998877766


Q ss_pred             hh--HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCc
Q 014594          181 TM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT  257 (422)
Q Consensus       181 ~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~  257 (422)
                      ..  ....++..+...+.+..+++...+.+..++.....+++++++++.+|.||...+.+++.++++. +.++++|.+++
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~t~tG~~~~~~~i~~~~~~~~~~~~vD~~ss  182 (388)
T d2ch1a1         103 WAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVAS  182 (388)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTT
T ss_pred             ccccchhhhhhhcccccccccccccccchhhhhhhhccCCcceeeeeecccccccccchhhhcchhccccceeeeeeeec
Confidence            43  3345666888888888777778888888888776789999999999999999999999999987 99999999988


Q ss_pred             cccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc-------------------------CCC
Q 014594          258 EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK-------------------------QPY  312 (422)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~-------------------------~~~  312 (422)
                      ....    .-.++..+.++++.|-.|.++.++ .+|+++.+++.++......                         .++
T Consensus       183 ~g~~----pid~~~~~~d~~~~s~~K~~~gp~-G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (388)
T d2ch1a1         183 LCGV----PFYMDKWEIDAVYTGAQKVLGAPP-GITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHH  257 (388)
T ss_dssp             BTTB----CCCTTTTTCCEEECCCC-CCCCCS-SCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCC
T ss_pred             cccc----ccchhccCceEEEEccccccCCCC-eEEEEeccHHHHHhhhcccCccccccccchhhhhhhcccccccccCc
Confidence            5432    112334555688888899775332 4788888988887654221                         113


Q ss_pred             CCcHHHHHHHHHHccCC--hHHH-HHHHHHHHHHHHHHHHccCCCCcccCC----CceEEEEEeCCCCCHHHHHHHHH-h
Q 014594          313 NVSVAAEVAACAALQNP--IYLE-VKEALIKERERLFKLLKDVPFLNPYPS----YSNFILCEVTSGMDAKKLKDDLA-K  384 (422)
Q Consensus       313 ~~~~~~~~aa~~~L~~~--~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~----~~~f~~~~~~~~~~~~~~~~~L~-~  384 (422)
                      +.+.....++..+++..  +... ..++.+.........+...+.....+.    ....+.+.+|++.++.++...|+ +
T Consensus       258 t~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rs~~v~~~~~p~g~~~~~l~~~l~~~  337 (388)
T d2ch1a1         258 TVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIMIPKGVDWWKVSQYAMNN  337 (388)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECCTTCCHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhcccccccCCHHHhCCeEEEEECCCCCCHHHHHHHHhhc
Confidence            44555555555555431  1122 333444444445555544332221111    22456788988899999999987 6


Q ss_pred             CCcEEEeCCCCCCCCeEEEE-ec---ChhhHHHHHHHHhh
Q 014594          385 MGVMIRHYNNKELKGYVRVS-VG---KPEHTDALMECLMH  420 (422)
Q Consensus       385 ~gI~v~~~~~~~~~~~iRis-~~---~~~~~~~l~~al~~  420 (422)
                      +||.++.|.....++.|||| ++   +.++++.+.++|++
T Consensus       338 ~gI~v~~G~~~~~~~~~RIs~~g~~~t~edI~~ll~alke  377 (388)
T d2ch1a1         338 FSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKE  377 (388)
T ss_dssp             HCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred             CCEEEeCCCccccCCEEEEcCCcCCCCHHHHHHHHHHHHH
Confidence            79999987765456789999 54   34667777777765

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.84  E-value=2.1e-19  Score=171.05  Aligned_cols=310  Identities=10%  Similarity=0.001  Sum_probs=211.5

Q ss_pred             CCCCCCCHHHHHHHhcCCCCCCCCC--cchHHHHHHHHHHcCCCCCC--EEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 014594          104 ENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLESDH--ILVGCGADELIDLIMRCVLDPGDKIVDCPPT  179 (422)
Q Consensus       104 ~~~~~~~~~v~~al~~~~~~~~y~~--~~~~~lr~~la~~~~~~~~~--i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~  179 (422)
                      ..|.+.++.|++|+.....+++-+.  .-..+.|+.+++++|+++++  +++++|+|++++.++..+..+++.+++....
T Consensus         6 pGP~~~~~~V~~A~~~~~~~~~~~~~~~~~~~~r~~l~~l~~~~~~~~~i~~t~s~T~~~~~~~~~l~~~~~~~~~~~~~   85 (361)
T d1m32a_           6 PGPLTTSRTVKEAMLFDSCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNG   85 (361)
T ss_dssp             SSSCCCCHHHHHTTCCCCCTTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEEEEESS
T ss_pred             CCCCCCCHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCHHHHHHHHHHHhhhhccccceeeeh
Confidence            3466678899988875322222121  23678999999999997765  7888999999999999998888877776665


Q ss_pred             ch--hHHHHHHHcCCEEEEecCCCCCCCCH--HHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEcc
Q 014594          180 FT--MYEFDAAVNGAAVVKVPRKSDFSLNV--ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDE  254 (422)
Q Consensus       180 y~--~~~~~~~~~g~~~~~v~~~~~~~~d~--~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~De  254 (422)
                      +.  ......+..+.....+........+.  +....... .+++++.+++.+|.||...|.+++.++++. |+++++|.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~tG~~~~i~~i~~~~~~~g~~~~vDa  164 (361)
T d1m32a_          86 AYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNAD-PTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDA  164 (361)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHC-TTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEEC
T ss_pred             hhhhhHHHHhhhhhcccccccccccCCccchhhHHHHHhc-cCccceEEEeeecccccchhhhhhhhhhcccceeeEeec
Confidence            53  23334444566665555433333333  33333333 789999999999999999999999999998 99999999


Q ss_pred             CCccccCCCchhhhhhcCCcEEEEccChhhhcc-ccccceeeecCHHHHHHHHHhc--------------------CCCC
Q 014594          255 AYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL-AGLRVGYGAFPLSIIEYLWRAK--------------------QPYN  313 (422)
Q Consensus       255 ay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~r~G~i~~~~~~~~~l~~~~--------------------~~~~  313 (422)
                      +++.....    ..+...+.++++.|..|.++. +|  +|+++.+++..+......                    ..++
T Consensus       165 ~qs~G~~~----~d~~~~~~D~~~~s~~K~l~gp~G--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t  238 (361)
T d1m32a_         165 MSSFGGIP----MDIAALHIDYLISSANKCIQGVPG--FAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFT  238 (361)
T ss_dssp             TTTTTTSC----CCTTTTTCSEEEEESSSTTCCCSS--EEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSC
T ss_pred             ccccCccc----ccccccccceEEeeecccccCCCC--ceEEEechhhhhhhccccccccccchhhhccccccccccCCC
Confidence            99854321    122344566888899997743 45  788888877665432111                    1245


Q ss_pred             CcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC---CceEEEEEeCC--CCCHHHHHHHHHh
Q 014594          314 VSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPYPS---YSNFILCEVTS--GMDAKKLKDDLAK  384 (422)
Q Consensus       314 ~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~~f~~~~~~~--~~~~~~~~~~L~~  384 (422)
                      .+.....+...++..   ..... ..++.+...+.+.+.++..+.....+.   ....+.+.+|+  ..+..++.+.|.+
T Consensus       239 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~rs~~v~~~~~p~~~~~~~~~~~~~l~~  318 (361)
T d1m32a_         239 SPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKE  318 (361)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCTTCCHHHHHHHHHH
T ss_pred             CCchhhhHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHhhcCCcccCChhhcCCcEEEEECCCCCCCCHHHHHHHHHH
Confidence            555555555555542   22334 556677777888888887775433222   12334567764  4678899999999


Q ss_pred             CCcEEEeCCCCCCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014594          385 MGVMIRHYNNKELKGYVRVSV---GKPEHTDALMECLMHL  421 (422)
Q Consensus       385 ~gI~v~~~~~~~~~~~iRis~---~~~~~~~~l~~al~~l  421 (422)
                      +||.+..|.. ..++++||+.   .+.++++++.++|+..
T Consensus       319 ~gi~i~~G~~-~~~~~~Ris~~g~~~~~di~~lv~al~~~  357 (361)
T d1m32a_         319 QGFVIYPGKV-SQSDCFRIGNIGEVYAADITALLTAIRTA  357 (361)
T ss_dssp             TTEECEECCC-SSSCEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred             CCcEEECCCc-CCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence            9999988753 4467899994   3677788888888753

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=99.83  E-value=2.2e-18  Score=163.32  Aligned_cols=232  Identities=18%  Similarity=0.163  Sum_probs=176.3

Q ss_pred             CCHHHHHHHhcCCCCCCC---CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH
Q 014594          109 PPPEVREALGQLKFPYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF  185 (422)
Q Consensus       109 ~~~~v~~al~~~~~~~~y---~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~  185 (422)
                      ..++..+.......++.|   .+|....|++.++++.|.  +..+++++|+.|+..++..++++||+|+++...|.....
T Consensus        40 ~~~~~~~~~~~~~~~~~Y~R~~nPT~~~LE~~la~LEgg--~~a~~~sSGmaAi~~~l~~ll~~Gd~vi~~~~~Yg~t~~  117 (397)
T d1y4ia1          40 SAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERG--EAGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHA  117 (397)
T ss_dssp             SHHHHHHHHHSCSSSSCCCTTSCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHH
T ss_pred             CHHHHHHhhcCCcCCceeeCCCCHHHHHHHHHHHHHhCC--ccceeehHHHHHHHHHHhhccCCCCeeeeecccccccch
Confidence            334444444333333445   456678899999999984  467888999999999999999999999999999975443


Q ss_pred             ----HHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc
Q 014594          186 ----DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS  260 (422)
Q Consensus       186 ----~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~  260 (422)
                          .....|+++..++.     -|++.++++++ +++|+|++.+|.||+..+.+.+.+.++++. |+++++|..+..-.
T Consensus       118 ~~~~~l~~~Gi~~~~vd~-----~d~~~~~~~i~-~~Tklv~~Esp~NP~l~v~Di~~i~~iA~~~gi~~vvDnT~atP~  191 (397)
T d1y4ia1         118 FLSHSMPKFGINVRFVDA-----GKPEEIRAAMR-PETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPY  191 (397)
T ss_dssp             HHHTHHHHTTCEEEEECT-----TSHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTT
T ss_pred             hhhcccCCCceEeeccCC-----CCHHHHHHhcC-CCCcEEEecCCcccceeecccHHHHHHhhcCCceEEecCcccCcc
Confidence                34568999999873     47899999997 799999999999999999999999999997 99999999987322


Q ss_pred             CCCchhhhhhcCCcEEEEccChhhhcccc-ccceeeecCHHHHHHHH--Hhc--CCCCCcHHHHHHHHHHccCChHHH-H
Q 014594          261 GLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLW--RAK--QPYNVSVAAEVAACAALQNPIYLE-V  334 (422)
Q Consensus       261 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~--~~~--~~~~~~~~~~~aa~~~L~~~~~~~-~  334 (422)
                      .. .++    ..+.+|++.|.+|.++--+ .=.|.++++++.+.+.+  ..+  ....+++.....+...|+.   +. +
T Consensus       192 ~~-~Pl----~~GaDivihS~TKyi~Ghsdvl~G~v~~~~~~~~~~r~~~~~~~~G~~l~p~~a~l~~rgl~T---L~lR  263 (397)
T d1y4ia1         192 CQ-QPL----QLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKT---LGIR  263 (397)
T ss_dssp             TC-CGG----GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT---HHHH
T ss_pred             cC-cch----hcCCCEEEEehhhhcCCCcceeeeccCCCHHHHHHHHHHHHHhCcCCcCCHHHHHHHHcCcCc---HHHH
Confidence            11 111    3345599999999875333 44678888988776543  222  2346778887777777654   45 7


Q ss_pred             HHHHHHHHHHHHHHHccCCCCc
Q 014594          335 KEALIKERERLFKLLKDVPFLN  356 (422)
Q Consensus       335 ~~~~~~~~~~l~~~L~~~~~~~  356 (422)
                      .++..++...+.+.|++++.+.
T Consensus       264 m~~~~~nA~~lA~~L~~hp~V~  285 (397)
T d1y4ia1         264 MERHCENALKIARFLEGHPSIT  285 (397)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTEE
T ss_pred             HHHHHHHHHHHHHHHHhCCCcC
Confidence            7888999999999999987553

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=99.82  E-value=1.1e-17  Score=158.25  Aligned_cols=214  Identities=16%  Similarity=0.167  Sum_probs=170.2

Q ss_pred             CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH----HcCCEEEEecCCCC
Q 014594          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKSD  202 (422)
Q Consensus       127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~~  202 (422)
                      .+|....|+++|+++.|.  +..+++++++.|+..++.+++++||+|+++...|......++    ..|+++..++.   
T Consensus        57 ~nPT~~~LE~~la~LEg~--~~a~~~~SGmaAi~~~l~~l~~~Gd~vl~~~~~Yg~t~~l~~~~~~~~Gi~~~~~d~---  131 (392)
T d1gc0a_          57 SNPTLNLLEARMASLEGG--EAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM---  131 (392)
T ss_dssp             CCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT---
T ss_pred             CChHHHHHHHHHHHHhCC--cceeehhhHHHHHHHHHHhhccCCCeeecccccchhhhhhhhhhhccCCcccccCCc---
Confidence            556678999999999984  578889999999999999999999999999999976655543    36999988863   


Q ss_pred             CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccC
Q 014594          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (422)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~  281 (422)
                        .|+++++++++ +++|+|++.+|.||+..+.+++.+.+|++. |+++++|..|..-.     ....-+.+.++++.|.
T Consensus       132 --~d~~~~~~ai~-~~t~lv~~Esp~NP~l~v~Di~~i~~ia~~~g~~~vvDnT~atP~-----~~~Pl~~GaDivihS~  203 (392)
T d1gc0a_         132 --ADLQALEAAMT-PATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPY-----LQRPLELGADLVVHSA  203 (392)
T ss_dssp             --TCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHH-----HCCGGGGTCSEEEEET
T ss_pred             --cCHHHHHHhCC-CCCeEEEecccccceeeecchHHHHHHHHhcCCEEEEecCccCcc-----ccChHHhCCCEEEEec
Confidence              47899999997 799999999999999999999999999998 99999999987211     1111134556999999


Q ss_pred             hhhhcc-ccccceeeecCHHHHHHHH--Hhc--CCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594          282 SKRAGL-AGLRVGYGAFPLSIIEYLW--RAK--QPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFL  355 (422)
Q Consensus       282 SK~~~~-~G~r~G~i~~~~~~~~~l~--~~~--~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~  355 (422)
                      +|-++- ...-.|.++++.+.+.+++  ..+  ....+++.....+...|+.   +. +.++..++...+.+.|++.+.+
T Consensus       204 TKyi~Ghsd~~~G~v~~~~~~~~~~r~~~~~~~~G~~~~p~da~ll~rgl~T---L~lRm~~~~~nA~~lA~~L~~hp~V  280 (392)
T d1gc0a_         204 TKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT---LNLRMDRHCANAQVLAEFLARQPQV  280 (392)
T ss_dssp             TTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred             ceeecCCcccccccccchhHHHHHHHHHHHHHccCCcCChhhHHHHHhcccc---HHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            998753 2356788888988877653  222  3456788877777776654   44 7788899999999999987654


Q ss_pred             c
Q 014594          356 N  356 (422)
Q Consensus       356 ~  356 (422)
                      .
T Consensus       281 ~  281 (392)
T d1gc0a_         281 E  281 (392)
T ss_dssp             E
T ss_pred             c
Confidence            3

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.81  E-value=4.3e-18  Score=160.89  Aligned_cols=214  Identities=15%  Similarity=0.171  Sum_probs=165.4

Q ss_pred             CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH----cCCEEEEecCCC
Q 014594          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKS  201 (422)
Q Consensus       126 y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~  201 (422)
                      +.+|....|++.|+++-+.  +..+++++|+.|+..+ ..++++||.|++..+.|.......+.    .|+++..++   
T Consensus        46 ~~nPt~~~le~~la~LE~~--~~a~~fsSGMaAisal-l~ll~~Gd~vv~~~~~Yg~t~~l~~~~~~~~gi~~~~~d---  119 (380)
T d1ibja_          46 SGNPTRDALESLLAKLDKA--DRAFCFTSGMAALSAV-THLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVN---  119 (380)
T ss_dssp             TCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHH-HTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEEC---
T ss_pred             CCChHHHHHHHHHHHHcCC--ceEEehhhHHHHHHHH-HHhhCCCCEEEEEecccccccchhhhhhccccccccccC---
Confidence            3566678999999999984  5678888889999765 45899999999999999866655543    688888876   


Q ss_pred             CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEcc
Q 014594          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT  280 (422)
Q Consensus       202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S  280 (422)
                        ..|+++++++++ +++|+|++.+|.||+..+.+.+.+.++++. |+++|+|..+.....-. ++    .++.++++.|
T Consensus       120 --~~~~~~~~~ai~-~~t~li~~EtpsNP~l~v~Di~~i~~iA~~~g~~~vVDnT~atP~~~~-Pl----~~GaDiVvhS  191 (380)
T d1ibja_         120 --TTKLDEVAAAIG-PQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSR-PL----ELGADIVMHS  191 (380)
T ss_dssp             --TTSHHHHHHHCC-SSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCC-GG----GTTCSEEEEE
T ss_pred             --cchHHHHHHHhc-cCccEEEeccccccccccccHHHHHHHHHHcCCeEEeecccccccccc-cc----ccCCCEEEec
Confidence              346899999997 799999999999999999999999999998 99999999987322111 11    3455699999


Q ss_pred             Chhhhcccc-ccceeeecC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594          281 FSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFL  355 (422)
Q Consensus       281 ~SK~~~~~G-~r~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~  355 (422)
                      .+|.++..| .=.|.++.+ .++.+.+......  ..+++.....+...|+.   +. +.++..++...+.+.|++.+.+
T Consensus       192 ~TKyi~GhsDv~~G~v~~~~~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~T---l~lRm~~~~~nA~~lA~~L~~hp~V  268 (380)
T d1ibja_         192 ATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKT---MALRIEKQQENARKIAMYLSSHPRV  268 (380)
T ss_dssp             TTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred             ccceeccccCccccccccchhhHHHHHHhhccccCCcCCHHHHHHHHhcchh---hhhhHHHHHHHHHHHHHHHHhCCCe
Confidence            999876433 345666655 5566766655443  34677777777776654   44 7888899999999999987655


Q ss_pred             c
Q 014594          356 N  356 (422)
Q Consensus       356 ~  356 (422)
                      .
T Consensus       269 ~  269 (380)
T d1ibja_         269 K  269 (380)
T ss_dssp             C
T ss_pred             e
Confidence            3

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.80  E-value=9.9e-17  Score=152.04  Aligned_cols=234  Identities=15%  Similarity=0.167  Sum_probs=175.2

Q ss_pred             CCCHHHHHHHhcCCCCCCC---CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHH
Q 014594          108 GPPPEVREALGQLKFPYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE  184 (422)
Q Consensus       108 ~~~~~v~~al~~~~~~~~y---~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~  184 (422)
                      +..++..+....-..++.|   .+|....|+++|+++.|.  +..+++++|+.|+..++.+++++||.|++....|....
T Consensus        43 ~~~~~~~~~~~~~~~~~~Y~R~~nPt~~~LE~~la~LEgg--~~a~~~sSGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~t~  120 (398)
T d1qgna_          43 NKTSELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGA--ESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTR  120 (398)
T ss_dssp             SSHHHHHHHHTTSSCCCCBGGGCCHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHH
T ss_pred             CCHHHHHHHhcCCcCCceecCCCChHHHHHHHHHHHHhCC--ceEEEecCcchHHHHHHhhcccccccccccccccchhh
Confidence            3334444444333334556   456678899999999984  57899999999999999999999999999999997655


Q ss_pred             HHHH----HcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccc
Q 014594          185 FDAA----VNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF  259 (422)
Q Consensus       185 ~~~~----~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~  259 (422)
                      ...+    ..|+++..++.     .|.+..++.+..+++++|++.+|.||+..+.+.+.+.++++. |+++|+|..+...
T Consensus       121 ~l~~~~~~~~gi~~~~~~~-----~~~~~~~~~~~~~~t~~v~~EspsNP~l~v~Di~~ia~ia~~~g~~~vVDnT~atP  195 (398)
T d1qgna_         121 IFIETILPKMGITATVIDP-----ADVGALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATP  195 (398)
T ss_dssp             HHHHHTGGGGTCEEEEECS-----SCHHHHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCT
T ss_pred             hhhcccccccccccccccc-----cchhhhhhhhccccceEEEccCccccccccchHHHHHHHHhhcCCEEEecceeecc
Confidence            4443    37888888763     345555555444899999999999999999999999999997 9999999998732


Q ss_pred             cCCCchhhhhhcCCcEEEEccChhhhcccc-ccceeeecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HH
Q 014594          260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VK  335 (422)
Q Consensus       260 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~  335 (422)
                      ..-. +   + ..+.+|++.|.+|.++-.| +-.|.++.++++++.++.....  ..+++.....+...|+   -+. +.
T Consensus       196 ~~~~-P---l-~~GaDiVihS~TKy~~Ghsdv~~G~v~~~~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~---TL~lRm  267 (398)
T d1qgna_         196 LNQK-A---L-ALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLHHILGGALNPNAAYLIIRGMK---TLHLRV  267 (398)
T ss_dssp             TTCC-T---T-TTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGG---GHHHHH
T ss_pred             ccCC-c---h-hhCCCEEEEechhhcCcccceeehhhcchhhhhhhhhhhcccCCCcCCHHHHHHHHhcch---HHHHHH
Confidence            2111 1   1 3455699999999875433 4467777888888887766544  3567777776666663   345 88


Q ss_pred             HHHHHHHHHHHHHHccCCCCc
Q 014594          336 EALIKERERLFKLLKDVPFLN  356 (422)
Q Consensus       336 ~~~~~~~~~l~~~L~~~~~~~  356 (422)
                      ++..++...+.+.|++++.+.
T Consensus       268 ~~~~~nA~~lA~~L~~hp~V~  288 (398)
T d1qgna_         268 QQQNSTALRMAEILEAHPKVR  288 (398)
T ss_dssp             HHHHHHHHHHHHHHHTCTTEE
T ss_pred             HHHHHHHHHHHHHHHhCCCee
Confidence            889999999999999887553

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.80  E-value=1.9e-17  Score=158.30  Aligned_cols=295  Identities=16%  Similarity=0.149  Sum_probs=200.7

Q ss_pred             HHHHHHHhc-CCCCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHH
Q 014594          111 PEVREALGQ-LKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDA  187 (422)
Q Consensus       111 ~~v~~al~~-~~~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~  187 (422)
                      ++-++++.+ +..+ .| ..+...+|++.+++++|.  ++++++++||.|+.+++.++ +++||+|++++.+|.......
T Consensus        12 ~~~~~~~~~~~~~~-~~~~G~~v~~~E~~la~~~g~--~~ai~~~sgt~Al~~al~al~~~~gdeVi~~~~~~~~~~~ai   88 (376)
T d1mdoa_          12 AEELAAVKTVLDSG-WITTGPKNQELEAAFCRLTGN--QYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNMI   88 (376)
T ss_dssp             HHHHHHHHHHHHHT-CCSSSHHHHHHHHHHHHHHCC--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHHH
T ss_pred             HHHHHHHHHHHhcC-CCcCCHHHHHHHHHHHHHHCc--CeEEEeCCHHHHHHHHHHHhCCCCCCEEEEecccccccccch
Confidence            444455554 2222 23 334578999999999996  57888999999999999998 899999999999999999999


Q ss_pred             HHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCCc
Q 014594          188 AVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLES  264 (422)
Q Consensus       188 ~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~~  264 (422)
                      ...|++++.++.+ +.+.+|++.|+++++ ++|++|+++   |..|...+.++|.++++. |++||+|.+++.+. +.+.
T Consensus        89 ~~~g~~pv~~d~~~~~~~~d~~~l~~~i~-~~tkaIi~~---h~~G~~~~~~~i~~i~~~~~i~vIeD~a~a~g~~~~~~  164 (376)
T d1mdoa_          89 VLLGANPVMVDVDRDTLMVTPEHIEAAIT-PQTKAIIPV---HYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKGR  164 (376)
T ss_dssp             HHTTCEEEEECBCTTTCCBCHHHHHHHCC-TTEEEECCB---CGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTE
T ss_pred             hccccceeeecccccccCCCHHHHHHhcC-CCCeEEEEe---CCCCCccchhHHHHHHHhcCceEEeccchhccCeeCCe
Confidence            9999999999965 457899999999998 789999965   468999999999999998 99999999998654 1222


Q ss_pred             hhhhhhcCCcEEEEccC--hhhhccccccceeeecC-HHHHHHHHHhcCC--------------------------CCCc
Q 014594          265 RMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP--------------------------YNVS  315 (422)
Q Consensus       265 ~~~~~~~~~~~i~~~S~--SK~~~~~G~r~G~i~~~-~~~~~~l~~~~~~--------------------------~~~~  315 (422)
                      ...   ..+.  .+.||  +|.++ .| ..|.++++ +++.+++......                          +.++
T Consensus       165 ~~g---~~g~--~~~Sf~~~K~l~-~g-~GG~i~t~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~n~~~~  237 (376)
T d1mdoa_         165 HIG---ARGT--AIFSFHAIKNIT-CA-EGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLP  237 (376)
T ss_dssp             ETT---SSSE--EEEECCTTSSSC-SS-SCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCC
T ss_pred             ecc---cccC--ccccCCCcCCCC-CC-CCCEEEEechhHHHHHHhhcccCCcccccccccccccccccchhcccccccc
Confidence            221   2232  34455  68775 33 35777764 5666666544321                          1233


Q ss_pred             HHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCC-----ceEEEEEeCC----CCCHHHHHHHHHhCC
Q 014594          316 VAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSY-----SNFILCEVTS----GMDAKKLKDDLAKMG  386 (422)
Q Consensus       316 ~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~-----~~f~~~~~~~----~~~~~~~~~~L~~~g  386 (422)
                      .+..+.....|..  +.+..++.+++++++.+.|+++++.......     ..+.++....    +.+.+++.+.|.++|
T Consensus       238 ~~~Aai~~~qL~~--~~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rd~l~~~L~~~g  315 (376)
T d1mdoa_         238 DLNAAIALAQLQK--LDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKG  315 (376)
T ss_dssp             HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHHHHSSCHHHHHHHHHHTT
T ss_pred             hhhhhhhhhhhhh--hhHHHHHHhhhhhhhhhhcccccccccccccccccccccccccccccccchhhHHHHHHHHHHCC
Confidence            3443433343432  2225566778888888888887655432211     1222232221    335678999999999


Q ss_pred             cEEEeCCCC--------------CC-------CCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          387 VMIRHYNNK--------------EL-------KGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       387 I~v~~~~~~--------------~~-------~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      |.++....+              ..       ...+.|-+.   +.++++++.++|+++
T Consensus       316 I~~~~~y~~~~~~~~~~~~~~~~~~p~a~~~~~~~i~LP~~~~lt~~ei~~I~~~i~~i  374 (376)
T d1mdoa_         316 IGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQI  374 (376)
T ss_dssp             BCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             CCeeeECcchhcCHHHHhhCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHH
Confidence            998743211              00       234666432   456778888887764

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.79  E-value=1.4e-18  Score=167.99  Aligned_cols=314  Identities=11%  Similarity=0.021  Sum_probs=195.9

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhc-CCCCCCCC--------C--cchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQ-LKFPYIYP--------D--PESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~y~--------~--~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      ++++.|+.+..... |..+.+++.+ +...+..+        .  .-.+++|+++++++|+++++|++++++|+++..++
T Consensus        26 ~~~iYLd~as~g~~-p~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~e~~R~~iA~llga~~~ei~~~~~~T~~~~~~~  104 (404)
T d1qz9a_          26 EGVIYLDGNSLGAR-PVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLFKVL  104 (404)
T ss_dssp             TTCEECCTTTSCCC-BTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHH
T ss_pred             CCCEEcCCcccccC-CHHHHHHHHHHHHHHhcccCcccccchhHHHHHHHHHHHHHHHhCCCCCcEEEecCchHHHHHHh
Confidence            45789988654332 4556666654 21111111        0  11347999999999999999999999999998876


Q ss_pred             HHh------cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594          164 RCV------LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (422)
Q Consensus       164 ~~l------~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (422)
                      ...      ..+++.|++.+-.|..........+.++..++.+.....+++.++++++ ++|++|.+++.+|.||..+|.
T Consensus       105 ~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~T~lV~i~~v~~~tG~~~pv  183 (404)
T d1qz9a_         105 SAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDSPEELPQAID-QDTAVVMLTHVNYKTGYMHDM  183 (404)
T ss_dssp             HHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESSGGGHHHHCS-TTEEEEEEESBCTTTCBBCCH
T ss_pred             hhhhhhhcccCCCcEEEEeccccchHHHHHHhhhheeeeeceeccccccchhHHHhcC-CCceEEEEecccccccceecH
Confidence            532      3577888877766654333332223333222222223457788999997 899999999999999999999


Q ss_pred             HHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhc-------
Q 014594          238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK-------  309 (422)
Q Consensus       238 e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~-------  309 (422)
                      +++.++++. |+.+++|.++.......    .+...+.++++.|..|.++.+...+|+++.+++..+.+....       
T Consensus       184 ~~i~~~~~~~~~~~~vD~~q~~g~~~~----~~~~~~~d~~~~s~~K~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~  259 (404)
T d1qz9a_         184 QALTALSHECGALAIWDLAHSAGAVPV----DLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQLCDLVPQPLSGWFGHS  259 (404)
T ss_dssp             HHHHHHHHHHTCEEEEECTTTTTTSCC----CHHHHTCSEEEECSSSTTCCCTTCCCEEEECTTTTTTSCCSCCCGGGBC
T ss_pred             HHHhccccccccceeEEeecccccccc----ccccccceEEEEechhhcccCCceEEEEEechhhhhhCCccccccCCcc
Confidence            999999998 99999999998543221    122223346777888865433334678887776654432100       


Q ss_pred             ------------------CCCCCcHHHH---HHHHHHccCChHHHHHHHHH---HHHHHHHHHHccCCCCcc-cCC----
Q 014594          310 ------------------QPYNVSVAAE---VAACAALQNPIYLEVKEALI---KERERLFKLLKDVPFLNP-YPS----  360 (422)
Q Consensus       310 ------------------~~~~~~~~~~---~aa~~~L~~~~~~~~~~~~~---~~~~~l~~~L~~~~~~~~-~p~----  360 (422)
                                        ...+.+....   .++...+.+..+....++..   .....+.+.+...+.+.+ .|.    
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~i~~p~~~~~  339 (404)
T d1qz9a_         260 RQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAK  339 (404)
T ss_dssp             TTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGG
T ss_pred             ccccccccccccccchhhhhhhccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHhhccCCCEEEECCCCccc
Confidence                              0122333333   33333444433222333333   333334444444444443 232    


Q ss_pred             CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec----ChhhHHHHHHHHhhh
Q 014594          361 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG----KPEHTDALMECLMHL  421 (422)
Q Consensus       361 ~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~----~~~~~~~l~~al~~l  421 (422)
                      .+..+.+.++   ++.++.+.|.++||.+....    +++||||++    +.+|++++.++|+.+
T Consensus       340 r~~~vsf~~~---~~~~v~~~L~~~gi~~~~r~----~~~lRiS~~h~ynt~~did~~~~~L~~v  397 (404)
T d1qz9a_         340 RGSHVSFEHP---EGYAVIQALIDRGVIGDYRE----PRIMRFGFTPLYTTFTEVWDAVQILGEI  397 (404)
T ss_dssp             BCSEEEEECT---THHHHHHHHHTTTEECEEET----TTEEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             eeeEEEEecC---CHHHHHHHHHHCCCEEeecC----CCeEEEECCCCCCCHHHHHHHHHHHHHH
Confidence            2456777776   58899999999999765432    479999974    457777777777653

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=99.79  E-value=1.5e-16  Score=150.23  Aligned_cols=213  Identities=17%  Similarity=0.157  Sum_probs=165.1

Q ss_pred             CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecCCC
Q 014594          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKS  201 (422)
Q Consensus       126 y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~  201 (422)
                      +.+|....|++.|+++.|.  +..+++++|+.|+..++.+++++||.|++....|......    ....|.++..++   
T Consensus        47 ~~nPt~~~le~~la~LEgg--~~a~~~sSGMaAi~~~l~~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~g~~~~~~d---  121 (384)
T d1cs1a_          47 RGNPTRDVVQRALAELEGG--AGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD---  121 (384)
T ss_dssp             TCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEEC---
T ss_pred             CCCHHHHHHHHHHHHHhCC--CceEEecChHHHHHHHHhhcccccceecccccccchhhhhhhhhhccccccccccc---
Confidence            3566778999999999984  5789999999999999999999999999999999654333    333677777776   


Q ss_pred             CCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEEc
Q 014594          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLR  279 (422)
Q Consensus       202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~~  279 (422)
                        ..|.+.+++.+. +++++|++.+|.||+..+.+.+.+.++++. |+++|+|..+.. +...+  +    ..+-+|++.
T Consensus       122 --~~d~~~~~~~~~-~~t~~v~~EspsNP~l~v~Di~~i~~ia~~~g~~~vVDNT~atP~~~~P--l----~~GaDiVvh  192 (384)
T d1cs1a_         122 --QGDEQALRAALA-EKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNP--L----ALGADLVLH  192 (384)
T ss_dssp             --TTCHHHHHHHHH-TCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCG--G----GGTCSEEEE
T ss_pred             --CCCHHHHHhhcc-ccccEEEEeccccccceeccHHHHhhhhhhcCcEEEEeccccCcccccc--c----ccCCCEEEE
Confidence              347899999997 899999999999999999999999999997 999999999963 22211  1    334559999


Q ss_pred             cChhhhcccc-ccceeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCC
Q 014594          280 TFSKRAGLAG-LRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPF  354 (422)
Q Consensus       280 S~SK~~~~~G-~r~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~  354 (422)
                      |.+|.++-.| .=.|.+++ ++++.+.+......  ..+++.....+..-|+.   +. +.++..++...+.+.|+.++.
T Consensus       193 S~TKyi~Ghsdv~~G~vv~~~~~~~~~~~~~~~~~G~~~~p~~a~ll~rgL~T---L~lRm~~~~~nA~~lA~~L~~hp~  269 (384)
T d1cs1a_         193 SCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT---LVPRMELAQRNAQAIVKYLQTQPL  269 (384)
T ss_dssp             ETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred             ccccccccCCCcccccccCCchhhhhhhhhhhhhhhhccccccHHHHhhccch---hHHHHHHHHHHHHHHHHhcccCCc
Confidence            9999875333 34566666 45565655544332  45677777766666654   45 788889999999999998875


Q ss_pred             C
Q 014594          355 L  355 (422)
Q Consensus       355 ~  355 (422)
                      +
T Consensus       270 V  270 (384)
T d1cs1a_         270 V  270 (384)
T ss_dssp             E
T ss_pred             e
Confidence            5

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=99.78  E-value=3.6e-17  Score=152.21  Aligned_cols=207  Identities=15%  Similarity=0.129  Sum_probs=159.4

Q ss_pred             HHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHH----HHHHHcCCEEEEecCCCCCCCCHH
Q 014594          133 RLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSDFSLNVE  208 (422)
Q Consensus       133 ~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~  208 (422)
                      .|++.++++.|.  +..+++++|+.|+..++..++++||+|+++.+.|....    ...+..|+++..++.     .|++
T Consensus         2 aLE~~la~Leg~--~~a~~~sSGMaAi~~~l~~ll~~Gd~iv~~~~~Yg~t~~~~~~~l~~~gi~~~~~d~-----~d~~   74 (331)
T d1pffa_           2 ALEGKIAKLEHA--EACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM-----AVPG   74 (331)
T ss_dssp             HHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-----TSTT
T ss_pred             HHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHhcCeEEEEecc-----cchh
Confidence            588999999884  57888999999999999999999999999999996433    345568999999874     3678


Q ss_pred             HHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHc-C-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhc
Q 014594          209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE-M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG  286 (422)
Q Consensus       209 ~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~-~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~  286 (422)
                      .++++++ +++++|++.+|.||+..+.+.+.+.+++. . |+++|+|..+.....-. +    -+.+-+|++.|.+|.++
T Consensus        75 ~~~~~i~-~~t~~i~~Es~~np~~~v~d~~~~~~~~a~~~~~~~vVDnT~atp~~~~-p----l~~GaDiVv~S~TKy~~  148 (331)
T d1pffa_          75 NIEKHLK-PNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTN-P----LDLGVDIVVHSATKYIN  148 (331)
T ss_dssp             HHHHTCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCC-G----GGGTCSEEEEETTTTTS
T ss_pred             hHhhhcc-cccceeeeecccccccccccchhhhhhhhcccCceEEeecccccccccc-c----cccCCCEEEecchhhcC
Confidence            9999997 79999999999999999999999998864 4 89999999987322111 1    13344599999999875


Q ss_pred             ccc-ccceeeecCHHHHHHHHHh--cCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594          287 LAG-LRVGYGAFPLSIIEYLWRA--KQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFL  355 (422)
Q Consensus       287 ~~G-~r~G~i~~~~~~~~~l~~~--~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~  355 (422)
                      -.| .-.|.++++++........  ...  ..+++.....+...|   +-+. +.++..++...+.+.|++++.+
T Consensus       149 Gh~d~~~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl---~Tl~~Rm~~~~~nA~~lA~~L~~hp~V  220 (331)
T d1pffa_         149 GHTDVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGT---LTLDMRVKRAAENAQKVAEFLHEHKAV  220 (331)
T ss_dssp             SSSSCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred             CCCccccccccccccchhhhhhhhhhhccCCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhhhhCCcE
Confidence            433 4567888887776665432  222  345666666555555   3345 8888999999999999988765

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=99.78  E-value=2.7e-17  Score=160.45  Aligned_cols=283  Identities=14%  Similarity=0.081  Sum_probs=191.2

Q ss_pred             HHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhc--CCCCEEEEcCCCchhHHHHHHHcCCEEEEecC---CCCCCCCHHHH
Q 014594          136 AALAKDSGLESDHILVGCGADELIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELI  210 (422)
Q Consensus       136 ~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~~d~~~l  210 (422)
                      ..+++.+|.+....++..|+++++.+++.+..  .+++.|+++.-.|..+...+...|.+++.++.   ++.+.+|+++|
T Consensus       120 ~~~~~~~g~~~~~~~~~~~t~~~~~~~l~a~r~~~~~~~vi~s~~~H~s~~k~~~~~g~~~~~v~~~~~~~~~~~d~~~l  199 (434)
T d2z67a1         120 ESFFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYVPVEDI  199 (434)
T ss_dssp             HHHHHHTTCCCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHH
T ss_pred             HHHHHhcCCCcceeecCcHHHHHHHHHHHHHHHhhcCceEEEeccCCHHHHHHHHHhCCcceEEEeecCCCccCCCHHHH
Confidence            44556677766566667777777777777653  36799999999999888888899999988862   45567999999


Q ss_pred             HHHhhc----CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccC-CCchhhhhhcCCcEEEEccChhh
Q 014594          211 ADAVER----EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKKHDNLIVLRTFSKR  284 (422)
Q Consensus       211 ~~~i~~----~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~-~~~~~~~~~~~~~~i~~~S~SK~  284 (422)
                      ++++++    .++.+|++++|++++|.+.+.+++.++|+. |+++++|++|..+.. ...........+.++++.|++|.
T Consensus       200 ~~~i~~~~~~~~~~~v~~~~~~~~~g~~~~l~~i~~~~~~~~~~l~vD~a~g~~~~~~~~~~~~~~~~~~D~~~~s~hK~  279 (434)
T d2z67a1         200 ENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRVDAVVSSSDKN  279 (434)
T ss_dssp             HHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCCSEEEEEHHHH
T ss_pred             HHHHHhhhhcCCceEEEeccCcCCCccccCHHHHHHHHHHhCCeEEEeccchhhhhhccccccccccCCcceEEEcCccc
Confidence            999964    367788888999999999999999999988 999999999975431 11122223344556888899998


Q ss_pred             hccccccceeeec-CHHHHHHHHHhcCCCCC--cHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC---CCCccc
Q 014594          285 AGLAGLRVGYGAF-PLSIIEYLWRAKQPYNV--SVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV---PFLNPY  358 (422)
Q Consensus       285 ~~~~G~r~G~i~~-~~~~~~~l~~~~~~~~~--~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~  358 (422)
                      ++.+ ...|++.. ++++++++.+.....+.  +.....++...+....+.+..++..++.+++.+.|+++   .+..+.
T Consensus       280 l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~g~~~~~~~~~~~a~~l~~~L~~l~~~~g~~ll  358 (434)
T d2z67a1         280 LLTP-IGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFL  358 (434)
T ss_dssp             HCCC-SSCEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBC
T ss_pred             cccC-CCccccccCcHHHHHHHHhhcccccccchHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhhhcCceec
Confidence            7743 33455554 56777777655443322  22333333344433333336666677777777777653   122322


Q ss_pred             -CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCC-----------CCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          359 -PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYN-----------NKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       359 -p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~-----------~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                       ......+.+.+  ..+..++...|.++||....+.           .....+++|++++   +.+++|++.++|+++
T Consensus       359 ~~~~~~~~~~~~--~~~~~~l~~~L~~~gI~g~~v~~~l~~~g~~~~~~~~~~~l~~~~s~~~T~edID~~i~~L~kI  434 (434)
T d2z67a1         359 DVESPIASCISV--NSDPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKI  434 (434)
T ss_dssp             CCCCSSEEEEEC--SSCHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred             CCCCCceeeeec--CCCHHHHHHHHHHcCCeeeehhhhccccCeeeecccCCCeEEEecCCCCCHHHHHHHHHHHhcC
Confidence             22233333444  4678899999999998543111           1233678999975   567778888887764

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=1.3e-16  Score=151.24  Aligned_cols=234  Identities=11%  Similarity=0.079  Sum_probs=174.7

Q ss_pred             CCCCHHHHHHHhcCCC-CCCC---CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchh
Q 014594          107 YGPPPEVREALGQLKF-PYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM  182 (422)
Q Consensus       107 ~~~~~~v~~al~~~~~-~~~y---~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~  182 (422)
                      |...++..++...... .+.|   .+|....|++.++++-|.  +..+++++|+.|+..++.+++++||.|++....|..
T Consensus        32 f~~~~~~~~~~~~~~~~~~~Y~R~~nPt~~~le~~la~LEg~--~~a~~~~SGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~  109 (391)
T d1cl1a_          32 FDSVEAKKHATRNRANGELFYGRRGTLTHFSLQQAMCELEGG--AGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEP  109 (391)
T ss_dssp             CSSHHHHHHHHHTTTTTCCCCTTTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEETTSCHH
T ss_pred             eCCHHHHHHHhcCCccCceEeECCCChhHHHHHHHHHHHhCC--ccEEEeccccceeeehhhcccCCCCeEEEecccccc
Confidence            3334555555544222 2334   556678999999999984  578999999999999999999999999999999976


Q ss_pred             HHHHHH----HcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC---CCeEEEccC
Q 014594          183 YEFDAA----VNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEA  255 (422)
Q Consensus       183 ~~~~~~----~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~---~~~li~Dea  255 (422)
                      ....++    ..|+++..++.     .|.+.++++++ +++++|++.+|.||+..+.+.+.+.++++.   |+++|+|..
T Consensus       110 T~~l~~~~l~~~Gi~~~~~d~-----~d~~~~~~~i~-~~t~~i~~EtpsNP~l~v~Di~~i~~~a~~~~~g~~~vVDnT  183 (391)
T d1cl1a_         110 SQDFCSKILSKLGVTTSWFDP-----LIGADIVKHLQ-PNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNT  183 (391)
T ss_dssp             HHHHHHHTGGGGTCEEEEECT-----TCGGGGGGTCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECT
T ss_pred             hhhhhhhcccccccccccccC-----ccccccccccc-cccceeeecccCcccccccccHHHHHHHHhccCCcEEEEecc
Confidence            554443    47888888873     36788888887 789999999999999999999999999853   999999999


Q ss_pred             CccccCCCchhhhhhcCCcEEEEccChhhhcccc-ccceeeecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHH
Q 014594          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYL  332 (422)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~  332 (422)
                      +.....-. ++    +.+.++++.|.+|.++-.| .=.|.++.+++..+.+......  ..+++.....+..-|+.   +
T Consensus       184 ~atP~~~~-Pl----~~GaDivvhS~TKy~~GhsdvlgG~vv~~~~~~~~~~~~~~~~G~~~~p~~a~ll~rgl~T---L  255 (391)
T d1cl1a_         184 WAAGVLFK-AL----DFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLRT---L  255 (391)
T ss_dssp             TTTTTSSC-GG----GGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCCCHHHHHHHHHHHTT---H
T ss_pred             ccchhhhc-cc----ccccceEEeecchhccccccccccceeccccccccchhhhhcccccCCchhhhhhhccchh---H
Confidence            97432211 11    2345599999999875433 4467777888777776654432  45677766666555543   4


Q ss_pred             H-HHHHHHHHHHHHHHHHccCCCCc
Q 014594          333 E-VKEALIKERERLFKLLKDVPFLN  356 (422)
Q Consensus       333 ~-~~~~~~~~~~~l~~~L~~~~~~~  356 (422)
                      . +.++..++...+.+.|++++.+.
T Consensus       256 ~lR~~~~~~nA~~vA~~L~~hp~V~  280 (391)
T d1cl1a_         256 GVRLRQHHESSLKVAEWLAEHPQVA  280 (391)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred             HHHHHHHHHHHHHHHHHHHhccccc
Confidence            4 77888999999999999887553

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=99.76  E-value=1.8e-16  Score=154.82  Aligned_cols=317  Identities=14%  Similarity=0.114  Sum_probs=199.6

Q ss_pred             eEEcCCCCCCCCCCHHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 014594           97 IVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVD  175 (422)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~  175 (422)
                      +|||-+........+....++.  .....| .++...+|++.+++++|.  +.++++++|+.|+.+++++++++||.|+.
T Consensus        44 ~iDl~sDs~t~am~~~~~aa~~--~GDd~Y~~dpt~~~lE~~~a~l~G~--e~al~~~SGt~An~~a~~~l~~~Gd~Vi~  119 (456)
T d1c7ga_          44 YIDLLTDSGTNAMSDKQWAGMM--IGDEAYAGSENFYHLEKTVKELFGF--KHIVPTHQGRGAENLLSQLAIKPGQYVAG  119 (456)
T ss_dssp             SEECSCSSSCCCEEHHHHHHTT--SCCCCSSSCHHHHHHHHHHHHHHCC--SEEEEESSHHHHHHHHHHHHCCTTEEEEE
T ss_pred             eeEcccCCCcccchHHHHHHHh--ccchhccCCchHHHHHHHHHHHhCC--CeEEECCCHHHHHHHHHHHhcCCCCeEec
Confidence            5788654332222344434332  111457 566789999999999996  47899999999999999999999999887


Q ss_pred             cCCCchhHHHHHHHcCCEEEEecC----------CCCCCCCHHHHHHHhhc---CCCeEEEEeCCCCcc-CcCCCHHHHH
Q 014594          176 CPPTFTMYEFDAAVNGAAVVKVPR----------KSDFSLNVELIADAVER---EKPKCIFLTSPNNPD-GSIINDEDLL  241 (422)
Q Consensus       176 ~~p~y~~~~~~~~~~g~~~~~v~~----------~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPt-G~~~~~e~l~  241 (422)
                      ... |..........|+..+.+..          ...+.+|++++++.+++   .++.++++.+++|+. |.+++.+.++
T Consensus       120 ~~~-f~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~I~~~~~~~~~~i~~e~~~n~~gG~~~~~~~l~  198 (456)
T d1c7ga_         120 NMY-FTTTRFHQEKNGATFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANMR  198 (456)
T ss_dssp             SSC-CHHHHHHHHHTTEEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHH
T ss_pred             Ccc-hHHHHHHHHHcCceeeeccccccccccccCCccccCCHHHHHHHhhhcCCccceeEEeeecccccccceecHHHHH
Confidence            765 44344445668888877642          13457899999999964   335688888999986 6777888777


Q ss_pred             HHHc---C-CCeEEEccCCcccc----------CCCchhhh----hhcCCcEEEEccChhhhccccccceeeecC-HHHH
Q 014594          242 KILE---M-PILVVLDEAYTEFS----------GLESRMEW----VKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSII  302 (422)
Q Consensus       242 ~i~~---~-~~~li~Deay~~~~----------~~~~~~~~----~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~-~~~~  302 (422)
                      +|.+   . |+.+++|+++....          +.+..+..    ...+-+ ++..|++|.++.++  .|+++++ +++.
T Consensus       199 ~i~~~a~~~~~~~~~D~a~~~~~a~~~~~~~~~~~~~~i~~i~~~~~~~ad-~~s~s~~K~~~~~~--GG~i~~~~~~l~  275 (456)
T d1c7ga_         199 AVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYAD-GCTMSGKKDCLVNI--GGFLCMNDEEMF  275 (456)
T ss_dssp             HHHHHHHHHTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCS-EEEEETTTTTCCSS--CEEEEESCHHHH
T ss_pred             HHHHHHHHcCCEEEEEcchhhcchhhhcccccccCCCChhhhccccccccc-cEEEeccccccccc--eeEEEcCCHHHH
Confidence            6554   4 99999999975211          11111111    112222 55568999887443  4777765 5566


Q ss_pred             HHHHHhc---CC----CCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeC----C
Q 014594          303 EYLWRAK---QP----YNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT----S  371 (422)
Q Consensus       303 ~~l~~~~---~~----~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~----~  371 (422)
                      ++++...   ..    ...+.....++...+......+..++..++.++|.+.|++.+...+.|.+++.++++..    .
T Consensus       276 ~~~r~~~~~~~g~~~~g~~~~~~~~a~a~~l~e~~~~~~l~~r~~~~~~L~e~L~~~g~~vv~p~g~~~v~vda~~~~~~  355 (456)
T d1c7ga_         276 SAAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEHRVKQVRYLGDKLREAGVPIVEPTGGHAVFLDARRFCPH  355 (456)
T ss_dssp             HHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEEHHHHCTT
T ss_pred             HHHHHhccccCCCcccchhhHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhccCCcccCCCCcceeEechhhccC
Confidence            6665332   11    23444444443333332111122333355668888999988766667788888777532    1


Q ss_pred             ----CCCHHHHHHHHH-hCCcEEEeCCC-------------CCCCCeEEEEec----ChhhHHHHHHHHhhh
Q 014594          372 ----GMDAKKLKDDLA-KMGVMIRHYNN-------------KELKGYVRVSVG----KPEHTDALMECLMHL  421 (422)
Q Consensus       372 ----~~~~~~~~~~L~-~~gI~v~~~~~-------------~~~~~~iRis~~----~~~~~~~l~~al~~l  421 (422)
                          .....++...|. +.||...+...             ......+|+++.    +.+++|.+.++|+.+
T Consensus       356 i~~~~~~~~~~~~~l~~~~GIr~~~~g~~~~~~~~~~g~~~~~~~e~vRLaip~~~~T~e~iD~Vae~i~~v  427 (456)
T d1c7ga_         356 LTQDQFPAQSLAASIYMETGVRSMERGIVSAGRSKETGENHRPKLETVRLTIPRRVYTYAHMDVVADGIIKL  427 (456)
T ss_dssp             SCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCSSSCCBCCCSCCEEEEECCTTSCCHHHHHHHHHHHHHH
T ss_pred             CCcccccHHHHHHHHHHHhCeeecccCccccccCCcccCccCCccceEEEecCcccCCHHHHHHHHHHHHHH
Confidence                123455555554 88987653211             112346999986    566777777877754

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=99.75  E-value=1.9e-15  Score=143.31  Aligned_cols=232  Identities=15%  Similarity=0.138  Sum_probs=173.3

Q ss_pred             CCCHHHHHHHhcCCCCCCC---CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHH
Q 014594          108 GPPPEVREALGQLKFPYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE  184 (422)
Q Consensus       108 ~~~~~v~~al~~~~~~~~y---~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~  184 (422)
                      +..++..+.......++.|   .+|....|++.|+++-|.  +..++.++|+.|+..++.+++++||.|++....|....
T Consensus        35 ~~~~~~~~~~~~~~~~~~YsR~~nPT~~~le~~la~LEg~--~~a~~~sSGmaAi~~~~l~l~~~gd~vv~~~~~yg~t~  112 (394)
T d1e5ea_          35 DNCQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKT--EACVATSSGMGAIAATVLTILKAGDHLISDECLYGCTH  112 (394)
T ss_dssp             SSHHHHHHHHTTSSCSCCBTTTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHH
T ss_pred             CCHHHHHHhhcCCcCCceecCCCCHHHHHHHHHHHHHhCC--cceeeeccchHHHHHHHHhhcccccccccccceeehhh
Confidence            3334444444433333445   456678899999999984  57888899999999999989999999999999996443


Q ss_pred             ----HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC--CCeEEEccCCcc
Q 014594          185 ----FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTE  258 (422)
Q Consensus       185 ----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~--~~~li~Deay~~  258 (422)
                          ......|+++..++.     -|+++++++++ +++|+|++..|.||+..+.+.+.+.++++.  |+++|+|..+..
T Consensus       113 ~~~~~~~~~~gi~~~~~d~-----~d~~~~~~~i~-~~t~lv~~Etp~NP~l~v~Di~~~~~~~~~~~g~~vvvDnT~at  186 (394)
T d1e5ea_         113 ALFEHALTKFGIQVDFINT-----AIPGEVKKHMK-PNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCS  186 (394)
T ss_dssp             HHHHTHHHHTTCEEEEECT-----TSTTHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTC
T ss_pred             HhHHHHhhccceeeeccCC-----CCHHHHHHhhc-ccccEEEEeccCCcceeeehhhhhhhccccccCeEEEecCcccC
Confidence                334568999999873     35688999997 799999999999999999999988886654  899999999873


Q ss_pred             ccCCCchhhhhhcCCcEEEEccChhhhcccc-ccceeeecCHHHHHHHHHh--cCC--CCCcHHHHHHHHHHccCChHHH
Q 014594          259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA--KQP--YNVSVAAEVAACAALQNPIYLE  333 (422)
Q Consensus       259 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~r~G~i~~~~~~~~~l~~~--~~~--~~~~~~~~~aa~~~L~~~~~~~  333 (422)
                      -..-. ++    ..+.+|++.|.+|.++-.+ .-.|.++++.+.+...+..  +..  ..+++.....+...|+.   +.
T Consensus       187 P~~~~-Pl----~~GaDiVvhS~TKy~~GhsDv~~G~v~~~~~~~~~~~~~~~~~~~G~~lsp~~a~ll~rgl~T---L~  258 (394)
T d1e5ea_         187 PMITN-PV----DFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGSVISPHDAWLITRGLST---LN  258 (394)
T ss_dssp             TTTCC-GG----GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT---HH
T ss_pred             cccCC-ch----hcCCCEEEechhhhcCCCcccccccccchhhHHHHHHHHHHHHhhCCCCChHHHHHHHhhchh---HH
Confidence            22111 11    3344599999999875333 5567788888887765433  222  34677777777766654   44


Q ss_pred             -HHHHHHHHHHHHHHHHccCCCC
Q 014594          334 -VKEALIKERERLFKLLKDVPFL  355 (422)
Q Consensus       334 -~~~~~~~~~~~l~~~L~~~~~~  355 (422)
                       +.++..++...+.+.|++++.+
T Consensus       259 lRm~r~~~nA~~lA~~L~~hp~V  281 (394)
T d1e5ea_         259 IRMKAESENAMKVAEYLKSHPAV  281 (394)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCTTE
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCc
Confidence             8888999999999999998755

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=99.74  E-value=4.1e-16  Score=149.33  Aligned_cols=268  Identities=19%  Similarity=0.161  Sum_probs=187.9

Q ss_pred             HHHHHHhc-CCCCCC--CCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHH
Q 014594          112 EVREALGQ-LKFPYI--YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDA  187 (422)
Q Consensus       112 ~v~~al~~-~~~~~~--y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~  187 (422)
                      +..+++.+ +..+..  +..+...++++.+++++|.  .+++.+++||.|+.++++++ +++||+|+++..+|......+
T Consensus        14 ~~~~~~~~~l~~g~~~~~~g~~v~~fE~~~a~~~g~--~~~v~~~SGt~Al~lal~~l~~~~gdeVi~p~~t~~a~~~ai   91 (384)
T d1b9ha_          14 AERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHGA--AHALAVTNGTHALELALQVMGVGPGTEVIVPAFTFISSSQAA   91 (384)
T ss_dssp             HHHHHHHHHHHTSCCBTTTCSHHHHHHHHHHHHTTC--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHH
T ss_pred             HHHHHHHHHHHcCCeeecCCHHHHHHHHHHHHHHCc--CeEEEeCCHHHHHHHHHHHcCCCCCCEEEEeccccccccccc
Confidence            34455554 333322  2334578999999999996  47899999999999999987 789999999999999998899


Q ss_pred             HHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCCc
Q 014594          188 AVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLES  264 (422)
Q Consensus       188 ~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~~  264 (422)
                      ...|++++.++.+ .++.+|++.+++.+. +++++|+   +.+..|...+.+++.++++. ++.+|+|.+++.++ +.+.
T Consensus        92 ~~~g~~p~~~d~~~~~~~~d~~~~~~~i~-~~tk~i~---~~~~~g~~~d~~~i~~~~~~~~i~lieD~a~a~ga~~~g~  167 (384)
T d1b9ha_          92 QRLGAVTVPVDVDAATYNLDPEAVAAAVT-PRTKVIM---PVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGK  167 (384)
T ss_dssp             HHTTCEEEEECBCTTTCCBCHHHHHHHCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTE
T ss_pred             cccccccccccccccccccchhhhccccc-ccccccc---cccccccccccccchhhhhhhhhhhhhhhceecccccCCE
Confidence            9999999999954 567899999999997 7899987   67788999999999999998 99999999998655 2233


Q ss_pred             hhhhhhcCCcEEEEccChhhhccccccceeeec-CHHHHHHHHHhcC-------------------CCCCcHHHHHHHHH
Q 014594          265 RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ-------------------PYNVSVAAEVAACA  324 (422)
Q Consensus       265 ~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~-------------------~~~~~~~~~~aa~~  324 (422)
                      .....+  +-.++-.+.+|.++ .| ..|.+++ ++++.+.++....                   .+.++.+..+.+..
T Consensus       168 ~~g~~g--~~~~~Sf~~~K~i~-~g-~GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~n~rms~l~Aaig~~  243 (384)
T d1b9ha_         168 RVGELD--SIATFSFQNGKLMT-AG-EGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRA  243 (384)
T ss_dssp             EGGGSS--SCEEEECCTTSSSC-SS-SCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHH
T ss_pred             ecCccc--ccceeccccccccc-cc-ccchhhhhhHHHHHHHHHHHhcCCCCccccccccccccccccccccchhhhhhh
Confidence            333322  22233334478765 33 3677776 4566666544321                   12345565555555


Q ss_pred             HccCChHHH-HHHHHHHHHHHHHHHHccCCCCccc--C---C-Cc-eEEEEEeCCCC--CHHHHHHHHHhCCcEEEeC
Q 014594          325 ALQNPIYLE-VKEALIKERERLFKLLKDVPFLNPY--P---S-YS-NFILCEVTSGM--DAKKLKDDLAKMGVMIRHY  392 (422)
Q Consensus       325 ~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~--p---~-~~-~f~~~~~~~~~--~~~~~~~~L~~~gI~v~~~  392 (422)
                      .|+.   ++ ..++-+++.+++.+.|++++++...  +   . .. .+..+.++...  +.+++.+.|.++||.++..
T Consensus       244 qL~~---ld~~~~~R~~~~~~y~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rd~l~~~L~~~GI~~~~~  318 (384)
T d1b9ha_         244 QLAR---LDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDRLVEAGLPAFAA  318 (384)
T ss_dssp             HHTT---HHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHHHHHHTTCCEEEC
T ss_pred             hhhh---cccchhhhhhhhhhhhhhhhcccccccccccccccccccccccceecccccccHHHHHHHHHHCCCCeeee
Confidence            5643   33 5555567788888888887655321  1   1 11 23344554222  2357999999999998754

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=99.73  E-value=2.6e-16  Score=150.07  Aligned_cols=230  Identities=18%  Similarity=0.169  Sum_probs=164.5

Q ss_pred             CHHHHHHHhcCCCCCCC---CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH
Q 014594          110 PPEVREALGQLKFPYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD  186 (422)
Q Consensus       110 ~~~v~~al~~~~~~~~y---~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~  186 (422)
                      +++..+.......++.|   .+|....|+++|+++.+.  +..+++++|+.|+..++.+++++||+|+++...|......
T Consensus        36 ~~~~~~~~~~~~~~~~YsR~~nPT~~~LE~~la~LE~~--~~a~~~~SGmaAi~~~~~~l~~~gd~il~~~~~Yg~t~~l  113 (421)
T d2ctza1          36 PEHAANLFALKEFGNIYSRIMNPTVDVLEKRLAALEGG--KAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQ  113 (421)
T ss_dssp             HHHHHHHHTTTTGGGSCBTTBCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHH
T ss_pred             HHHHHHhhcCCcCCceecCCCCHHHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHhhcccccceeecCCcCCchhHH
Confidence            34444444332223444   456678899999999984  5788889999999999999999999999999999755443


Q ss_pred             ----HHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCc--cc
Q 014594          187 ----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT--EF  259 (422)
Q Consensus       187 ----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~--~~  259 (422)
                          ....|+++..++..    -+.+..++.++ +++|+|++.+|.|||..+.+.+.+.++++. |+++|+|..+.  ++
T Consensus       114 ~~~~~~~~gi~~~~~d~~----~~~~~~~~~~~-~~t~li~~EtpsNP~l~v~Di~~i~~iA~~~g~~~vvDnT~a~tP~  188 (421)
T d2ctza1         114 FKVTLKRLGIEVRFTSRE----ERPEEFLALTD-EKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGY  188 (421)
T ss_dssp             HHTHHHHTTCEEEECCTT----CCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGT
T ss_pred             HHHHHhhccccceecccc----cCcchhccccC-CCceEEEEcCCCcceeEecchHHHHHHHHhcCCceEecccccccce
Confidence                45589999887632    23456666665 899999999999999999999999999998 99999999986  22


Q ss_pred             cCCCchhhhhhcCCcEEEEccChhhhcccc-ccceeeecCHH-------------------------------HHHHHHH
Q 014594          260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLS-------------------------------IIEYLWR  307 (422)
Q Consensus       260 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~r~G~i~~~~~-------------------------------~~~~l~~  307 (422)
                      ...+  +    ..+.+|++.|.+|.++.-| .=.|.++.+.+                               ++.+...
T Consensus       189 ~~~P--l----~~GaDiVvhS~TKyl~GHsD~l~G~vv~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (421)
T d2ctza1         189 LLRP--L----AWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARV  262 (421)
T ss_dssp             SCCG--G----GGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHH
T ss_pred             eccc--c----ccCCcEEEEechhhccCCCCeEEEEEEcCCcchhhhcccccccCCchhhhhhHHHHHhccHHHHHHHHH
Confidence            2211  1    3445599999999876444 33556664322                               1111110


Q ss_pred             -h--cCCCCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCC
Q 014594          308 -A--KQPYNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFL  355 (422)
Q Consensus       308 -~--~~~~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~  355 (422)
                       .  .....+++.....+...|+.   +. +.++..++...+.+.|++.+.+
T Consensus       263 ~~~~~~G~~~sP~~a~l~~rgl~T---L~lRm~~~~~nA~~vA~~L~~hp~V  311 (421)
T d2ctza1         263 DGLRDQGQALGPFEAWVVLLGMET---LSLRAERHVENTLHLAHWLLEQPQV  311 (421)
T ss_dssp             THHHHHCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred             HHHHhccCCCCHHHHHHHhcCCcc---hhhHHHHHHHHHHHHHhhhccCCCe
Confidence             0  01245677776666666643   44 7788899999999999988755

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=3.3e-16  Score=147.08  Aligned_cols=315  Identities=15%  Similarity=0.154  Sum_probs=212.4

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhc-C--CCCCCCCC------cch-HHH----HHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQ-L--KFPYIYPD------PES-RRL----RAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~--~~~~~y~~------~~~-~~l----r~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      +-|.|-..||-.  ++.|++++.. +  .+..+||.      ... .++    .+...++|+....+|-.. +++.|...
T Consensus        27 ~~i~LiaSEN~~--S~~v~~a~~S~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~a~~anVqp~-SGs~AN~a  103 (416)
T d1dfoa_          27 EHIELIASENYT--SPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPH-SGSQANFA  103 (416)
T ss_dssp             HSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCS-SHHHHHHH
T ss_pred             cCceEecCcccC--CHHHHHHhcCcccCcccCCCCCCcccCCChhHHHHHHHHHHHHHHHhCCCcceeecc-cCccHHHH
Confidence            348998888876  5899999976 2  33344443      211 222    234456788766666664 55557777


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHHH-----HHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCC
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYEF-----DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~-----~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (422)
                      ++.++++|||+|+..++.+.++..     .+.....+.+.++.+.+..+|.+++++...+.+||+|++-.-.  ....++
T Consensus       104 v~~All~pGD~Il~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~IDyd~l~~~a~~~kPklIi~G~S~--y~r~~d  181 (416)
T d1dfoa_         104 VYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHKPKMIIGGFSA--YSGVVD  181 (416)
T ss_dssp             HHHHHCCTTCEEEEECTTTTCCGGGTCTTSHHHHHSEEEEECBCSSSSBCHHHHHHHHHHHCCSEEEEECSS--CCSCCC
T ss_pred             HHHHhcCCCCeeeeccccccccccccccccccCceEEEEecccCCccCccHHHHHHHHHHhccceEEecccc--cccccC
Confidence            778899999999998887753321     1111234667777666667999999999988999999976333  558899


Q ss_pred             HHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecC---HHHHHHHHHhcCC
Q 014594          237 DEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP---LSIIEYLWRAKQP  311 (422)
Q Consensus       237 ~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~---~~~~~~l~~~~~~  311 (422)
                      .+++++|++. |.++++|.+|.. +...+.....+ .+. .++..|.+|++  +|-|.|.++.+   +++.+++.+...|
T Consensus       182 ~~~~reiad~vga~l~~D~aH~~GLIa~g~~~sP~-~~a-Dvvt~tThKtl--rGPrggiI~~~~~~~~~~~~i~~avfP  257 (416)
T d1dfoa_         182 WAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPV-PHA-HVVTTTTHKTL--AGPRGGLILAKGGSEELYKKLNSAVFP  257 (416)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCCT-TTS-SEEEEESSSTT--CCCSCEEEEESSCCHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhcCceEEcchhhhhcceeccccCCcc-ccc-ceeeeehhhcc--cCCCceEEEeccchHhHHHHHHhhhCc
Confidence            9999999997 999999999974 22111111111 122 38888999986  68889999985   6788888777666


Q ss_pred             CC---CcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHccCCCCccc-CCCceEEEEEeCC-CCCHHHHHHHHH
Q 014594          312 YN---VSVAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKDVPFLNPY-PSYSNFILCEVTS-GMDAKKLKDDLA  383 (422)
Q Consensus       312 ~~---~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~f~~~~~~~-~~~~~~~~~~L~  383 (422)
                      +.   +..-..++...++.   .+++.+..+++.++.+.|.+.|.+.|+..+. ..+...+++++.+ +.+..++.+.|.
T Consensus       258 g~qggp~~~~iaa~Aval~Ea~~~~fk~Y~~qvv~NA~~La~~L~~~G~~iv~ggTdnHlvlvdl~~~~~~G~~a~~~Le  337 (416)
T d1dfoa_         258 GGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALG  337 (416)
T ss_dssp             TTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHH
T ss_pred             ccccCccHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhCCcccccCCCCCceeEEEecccCCCHHHHHHHHH
Confidence            32   21122222222232   2355557778889999999999998864443 3445667888853 678888889999


Q ss_pred             hCCcEEE----eCCC--CCCCCeEEEEec-------ChhhHHHHHHHHh
Q 014594          384 KMGVMIR----HYNN--KELKGYVRVSVG-------KPEHTDALMECLM  419 (422)
Q Consensus       384 ~~gI~v~----~~~~--~~~~~~iRis~~-------~~~~~~~l~~al~  419 (422)
                      +.||.+.    |++.  +..+..|||+..       .+++++++.+.+.
T Consensus       338 ~~gI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~d~~~iA~~I~  386 (416)
T d1dfoa_         338 RANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMC  386 (416)
T ss_dssp             HTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHH
T ss_pred             HcCeEEeCCcCCCCCCCCCCCCceEeCCHHHHhCCCCHHHHHHHHHHHH
Confidence            9999986    3432  334678999963       3566666655554

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.70  E-value=6.5e-16  Score=144.39  Aligned_cols=316  Identities=16%  Similarity=0.154  Sum_probs=212.9

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcC---CCCCCCCC------cc-hHHH----HHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQL---KFPYIYPD------PE-SRRL----RAALAKDSGLESDHILVGCGADELIDL  161 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~y~~------~~-~~~l----r~~la~~~~~~~~~i~~~~G~~~al~~  161 (422)
                      +.|.|-..||-.  +|.|++++...   .+..+||.      .. ..++    .+...++|+.+..+|-..+|+. |...
T Consensus        24 ~~l~LiaSEN~~--S~~v~~a~~S~l~nkyaeG~pg~ryy~G~~~id~iE~la~~ra~~lF~a~~anVqp~SGs~-An~a  100 (405)
T d1kl1a_          24 AKIELIASENFV--SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHANVQPHSGAQ-ANMA  100 (405)
T ss_dssp             HSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHCCSEEECCCSSHHH-HHHH
T ss_pred             cCceEeccCCcC--CHHHHHHhcCcccCcCcCCCCCccccCCchhHHHHHHHHHHHHHHHhCCCcceeeccCchH-HHHH
Confidence            458998888876  58999999762   23334443      21 2223    2444567887666666655555 6667


Q ss_pred             HHHHhcCCCCEEEEcCCCchhHH-----HHHHHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCC
Q 014594          162 IMRCVLDPGDKIVDCPPTFTMYE-----FDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (422)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~-----~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (422)
                      ++.+|++|||+|+..++...++.     ........+.+.++.+ +++.+|.+++++.+.+.+||+|++-.-.  .-..+
T Consensus       101 v~~all~pGD~im~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~--y~r~~  178 (405)
T d1kl1a_         101 VYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASA--YPRII  178 (405)
T ss_dssp             HHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEECCSS--CCSCC
T ss_pred             HHHHhcCCCCEEEEeecccccccccCccccccceEEEEEEeccchhcccccHHHHHHHHHhhCcceEEecccc--ccccc
Confidence            77789999999998886554221     1111234577777754 5568999999999988999999875333  44778


Q ss_pred             CHHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHHHHHHhcCCCC
Q 014594          236 NDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN  313 (422)
Q Consensus       236 ~~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~l~~~~~~~~  313 (422)
                      +.+++++|++. |.+++.|-+|.. +...+.....+ .+- .++..|..|++  +|-|.|.++.+.++.+++.+...|+.
T Consensus       179 d~~~~reIad~vga~l~~D~aH~~GLIa~g~~~~P~-~~a-Dvvt~tThKtl--rGPrgg~I~~~~~~~~~i~~avfPg~  254 (405)
T d1kl1a_         179 DFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPV-PYA-HFVTTTTHKTL--RGPRGGMILCQEQFAKQIDKAIFPGI  254 (405)
T ss_dssp             CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TTC-SEEEEESSSTT--CCCSCEEEEECHHHHHHHHHHHTTTT
T ss_pred             ChHHHHHHHhhhCCEEecchhhHhhhhhhhhcCChh-hhh-hheeccccccc--cCCCCceEEecchhHHHHHhhhCccc
Confidence            99999999998 999999999964 22111111111 222 36777899986  68899999999999999988777642


Q ss_pred             Cc---HHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHccCCCCcccC-CCceEEEEEeCC-CCCHHHHHHHHHhC
Q 014594          314 VS---VAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKDVPFLNPYP-SYSNFILCEVTS-GMDAKKLKDDLAKM  385 (422)
Q Consensus       314 ~~---~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-~~~~f~~~~~~~-~~~~~~~~~~L~~~  385 (422)
                      .+   .-..++...+|.   .+++.+..+++.++.+.|.+.|.+.|+..+.. .+...+++++.+ +.+.....+.|.+.
T Consensus       255 qggp~~~~iAa~Aval~Ea~~~~fk~Ya~qvv~NAkaLa~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~g~~ae~~Le~a  334 (405)
T d1kl1a_         255 QGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEV  334 (405)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHH
T ss_pred             ccCcchhHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCCceeecCCCccceeeccccccCCcHHHHHHHHHHc
Confidence            21   122222222222   23444477788899999999999988654432 344678888853 67787877888899


Q ss_pred             CcEEE----eCCC--CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014594          386 GVMIR----HYNN--KELKGYVRVSVG-------KPEHTDALMECLMH  420 (422)
Q Consensus       386 gI~v~----~~~~--~~~~~~iRis~~-------~~~~~~~l~~al~~  420 (422)
                      ||.+.    |++.  +..+..|||+..       .+++++++.+.+.+
T Consensus       335 gI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~dm~~ia~~I~~  382 (405)
T d1kl1a_         335 GITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGL  382 (405)
T ss_dssp             TEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             CeEEcCCcCCCCCCCCCCCCceeecCHHHHhCCCCHHHHHHHHHHHHH
Confidence            99987    4432  334578999963       35666666665543

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=1.6e-15  Score=147.63  Aligned_cols=324  Identities=13%  Similarity=0.065  Sum_probs=210.9

Q ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHhc-CCCC----CCCCCcc--hHHHHHHHHHHcCCCCC-----CEEEeCCHHHHHH
Q 014594           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFP----YIYPDPE--SRRLRAALAKDSGLESD-----HILVGCGADELID  160 (422)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~----~~y~~~~--~~~lr~~la~~~~~~~~-----~i~~~~G~~~al~  160 (422)
                      ++.+-++|.+..+.+. +|++.+.+.+ +..+    ..||...  ..++.+.+++++|.+..     .=.+|+|+++|+.
T Consensus        51 dg~~~~n~asf~~t~~-~~~~~~l~~~~~~~N~~~~~~~P~~~~lE~~~v~~la~L~~~p~~~~~~~~G~~t~GgSeA~~  129 (450)
T d1pmma_          51 DGNARQNLATFCQTWD-DENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACM  129 (450)
T ss_dssp             SCCGGGBCSCCSCCCC-CHHHHHHHHHTTTCBTTCTTTSHHHHHHHHHHHHHHHHHTTCCCCTTSCCSEEEESSHHHHHH
T ss_pred             CCCccccccccccCCC-CHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCccccCCCcCeeeCchHHHHH
Confidence            3444466766655554 4677777765 2221    2344321  34577788888887432     2589999999998


Q ss_pred             HHHHHhc-----------CCC-CEEEEcCCCchhHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhcCCCeEEEEeCC
Q 014594          161 LIMRCVL-----------DPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSP  227 (422)
Q Consensus       161 ~~~~~l~-----------~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p  227 (422)
                      +.+.+..           ..+ ..++++...|..+...++..|++++.++.++ ++.+|+++++++++ +++.+|+.+.+
T Consensus       130 ~a~~aar~~~~~~~~~~g~~~~~~~~~~~~~H~s~~Kaa~~~gi~~~~v~~~~~~~~~d~~~L~~~i~-~~t~~Vv~t~g  208 (450)
T d1pmma_         130 LGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACD-ENTIGVVPTFG  208 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCSCCEEEESSCCHHHHHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCC-TTEEEEECBBS
T ss_pred             HHHHHHHHHHHHHhhhcCCCCCCceEEecccHHHHHHHHHHcCCCceEeeecCCCCcCcHHHHHHHhh-hCceEEEeeee
Confidence            8776532           112 3477788889999999999999999999654 58999999999997 78999998999


Q ss_pred             CCccCcCCCHHHHHHHHcC-------CCeEEEccCCccccC--C-CchhhhhhcCCcEEEEccChhhhccccccceeeec
Q 014594          228 NNPDGSIINDEDLLKILEM-------PILVVLDEAYTEFSG--L-ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (422)
Q Consensus       228 ~NPtG~~~~~e~l~~i~~~-------~~~li~Deay~~~~~--~-~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~  297 (422)
                      +|.||.+-+.+++.+|++.       |+++++|.+|..+..  . +...........+-+..|.+|. +.....+||++.
T Consensus       209 tt~tG~~dpv~~i~~i~~~~~~a~~~~i~lHVDAA~gG~~~p~~~~~~~~~~~~~~aDSi~~s~HK~-~~~p~g~g~l~~  287 (450)
T d1pmma_         209 VTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKF-GLAPLGCGWVIW  287 (450)
T ss_dssp             CTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTT-TCCCSSCEEEEE
T ss_pred             eccCCCccccchhhHHHHHHHHHhccCcEEEeehhhccceeeeechhhhhhhcccceeEeecChhhc-cCCCCCeeEEEe
Confidence            9999999999999888642       899999999986531  1 1111111223445677889994 445567899998


Q ss_pred             CHH-HHHHHHHhc------------CCCCCcH---HHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCccc-C-
Q 014594          298 PLS-IIEYLWRAK------------QPYNVSV---AAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPY-P-  359 (422)
Q Consensus       298 ~~~-~~~~l~~~~------------~~~~~~~---~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p-  359 (422)
                      +.. .........            ..++-+.   ..+.+....+....+.+..++..+..+++.+.|++++.+.+. + 
T Consensus       288 r~~~~~~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~~~~~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~~~el~~~~  367 (450)
T d1pmma_         288 RDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTG  367 (450)
T ss_dssp             SSGGGSCGGGCEEEEETTEEEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCEEEEEEC
T ss_pred             cChhhhhhhcccccCcCCCCcCCCcccCccchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeCC
Confidence            543 222111100            0111121   223333333433445448888899999999999998865542 1 


Q ss_pred             ---CCceEEEEEeCC----CCCHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEecC---hhhHHHHHHHHh
Q 014594          360 ---SYSNFILCEVTS----GMDAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVGK---PEHTDALMECLM  419 (422)
Q Consensus       360 ---~~~~f~~~~~~~----~~~~~~~~~~L~~~gI~v~~~~~---~~~~~~iRis~~~---~~~~~~l~~al~  419 (422)
                         ..-+.+.+++.+    +.+..++.+.|+++|..|..+..   ......+|+.+..   .+..|+|.+.|+
T Consensus       368 ~p~~~l~~V~Fr~~~~~~~~~~~~~l~~~L~~~Gw~v~~~~~p~~~~~~~~lRvvv~~~~t~e~~d~lv~dl~  440 (450)
T d1pmma_         368 RPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYK  440 (450)
T ss_dssp             CTTTBSSEEEEEECTTCCCSSCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred             CCCCceEEEEEecCCcccCCCCHHHHHHHHHHcCCeeeccCcCCCcCCcEEEEEEccCCCCHHHHHHHHHHHH
Confidence               223456677642    46778899999999987754322   1223579999864   333444444433

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.70  E-value=2e-15  Score=143.00  Aligned_cols=208  Identities=13%  Similarity=0.110  Sum_probs=155.4

Q ss_pred             CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH----cCCEEEEecCCCC
Q 014594          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSD  202 (422)
Q Consensus       127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~  202 (422)
                      .+|....|+++|+++.|.  +..+++++|+.|+..++ .++.+||.|++....|......+..    .|.++..++    
T Consensus        53 gnPT~~~lE~~la~LE~~--~~a~~~sSGmaAi~~~l-~~l~~gd~iv~~~~~yg~t~~~~~~~l~~~gi~~~~~~----  125 (393)
T d1n8pa_          53 QNPNRENLERAVAALENA--QYGLAFSSGSATTATIL-QSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN----  125 (393)
T ss_dssp             CCHHHHHHHHHHHHHTTC--SEEEEESCHHHHHHHHH-HTSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEES----
T ss_pred             CChHHHHHHHHHHHHhCC--ceEEEecCchhHHHhhh-hcccCCCeeeeeeeecccchhhhhhhhhcccceeEEee----
Confidence            456678899999999984  56777788888997666 4778899999999999765555443    677766664    


Q ss_pred             CCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHc----C-CCeEEEccCCccccCCCchhhhhhcCCcEEE
Q 014594          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE----M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIV  277 (422)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~----~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~  277 (422)
                        .+.++++++++ +++|+|++.+|.||+..+.+.+.+.++++    . |+++|+|..+..-.     ....-.++-+|+
T Consensus       126 --~~~~~~~~~i~-~~t~lv~~EspsNP~l~v~Di~~ia~~a~~~~~~~g~~lvVDnT~atP~-----~~~Pl~~GADiV  197 (393)
T d1n8pa_         126 --DLLNDLPQLIK-ENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPY-----ISNPLNFGADIV  197 (393)
T ss_dssp             --SHHHHHHHHSC-SSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHH-----HCCGGGGTCSEE
T ss_pred             --cchHHHHHHhh-hhcceeEecCcchhhhhccchhhhhhhhhhhcccCCceEEEecCccCcc-----cCCchhhCCCEE
Confidence              24678999887 79999999999999999999999999987    3 89999999986311     111113445699


Q ss_pred             EccChhhhcccc-ccceeeec-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccC
Q 014594          278 LRTFSKRAGLAG-LRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE-VKEALIKERERLFKLLKDV  352 (422)
Q Consensus       278 ~~S~SK~~~~~G-~r~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~  352 (422)
                      +.|.+|.++..| +-.|.++. ++++.++++..+..  ..+++.....+..-|+.   +. +.++..++...+.+.|+..
T Consensus       198 vhS~TKyi~GhsDv~~G~v~~~~~~~~~~l~~~~~~~G~~~~p~~a~ll~rgl~T---l~lR~~~~~~nA~~lA~~L~~~  274 (393)
T d1n8pa_         198 VHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT---LHLRVRQAALSANKIAEFLAAD  274 (393)
T ss_dssp             EEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHTSC
T ss_pred             EEccccccCCCCccccceeeecchhHHHHHHHHHhhcCCCCChHHHHHHHhCCcc---hhhHHHHHHHHHHHHHHHHHhc
Confidence            999999875433 55677665 56677777665543  35677776666666643   44 7788889999999999754

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.70  E-value=1.7e-15  Score=148.73  Aligned_cols=288  Identities=12%  Similarity=0.100  Sum_probs=176.8

Q ss_pred             CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHH-cCCEEEEec--CCCCC
Q 014594          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVP--RKSDF  203 (422)
Q Consensus       127 ~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~v~--~~~~~  203 (422)
                      |..-..++++.+|+++|.+ +-+++++|++.++.+++.++++|||+|+++..+|......+.. .+..++...  .+...
T Consensus        64 ~~~~i~eae~~~A~~~ga~-~a~f~~~Gtt~~n~a~i~a~~~~gd~Vi~~~~~H~Sv~~~~~~l~~~~~~~~~~~~~~~g  142 (462)
T d1c4ka2          64 HEGPAVAAEKHAARVYNAD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPYG  142 (462)
T ss_dssp             TBTHHHHHHHHHHHHTTCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEECTTC
T ss_pred             CCHHHHHHHHHHHHHhCCC-eEEEECCchHHHHHHHHHHhcCCCCeEEecccchHHHHHHHHHHhcCCceeeeccccccc
Confidence            3334678999999999963 3455556667777777888999999999999999876654443 455544433  22211


Q ss_pred             --------CCCHHHHHHHhh--------cCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccC-CCch
Q 014594          204 --------SLNVELIADAVE--------REKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESR  265 (422)
Q Consensus       204 --------~~d~~~l~~~i~--------~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~-~~~~  265 (422)
                              .++.+.+++.+.        ..++..+++.+.+|-+|.+.+.++|.++++. |+++++|++|..... .+..
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~G~~~dl~~I~~ia~~~g~~l~vD~A~~~~~~~~~~~  222 (462)
T d1c4ka2         143 FIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMM  222 (462)
T ss_dssp             CEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGGG
T ss_pred             ccCCCChHHhhHHHHHhhhhhhcHHhhhccCCceeEEEEeeeeccchhhHHHHHHHHHHcCCEEEEechhhccccccCcC
Confidence                    234443333221        1456666666677789999999999999998 999999999975432 1111


Q ss_pred             hhhh--------hcCCcEEEEccChhhhccccccceeeec-C------------HHHHHHHHHhcCCCCCcHHHHHHHH-
Q 014594          266 MEWV--------KKHDNLIVLRTFSKRAGLAGLRVGYGAF-P------------LSIIEYLWRAKQPYNVSVAAEVAAC-  323 (422)
Q Consensus       266 ~~~~--------~~~~~~i~~~S~SK~~~~~G~r~G~i~~-~------------~~~~~~l~~~~~~~~~~~~~~~aa~-  323 (422)
                      ....        ...+.++++.|++|.++.++  .|.++. +            .+.........+..+++......+. 
T Consensus       223 ~~~~~~~g~~~~~~~~~D~~~~S~HK~lg~~~--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~sp~~~~~asl~~  300 (462)
T d1c4ka2         223 RNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFS--QTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDV  300 (462)
T ss_dssp             GGGCTTSCCCCCTTSCEEEEEECHHHHSSCCT--TCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHHH
T ss_pred             CcchhhccccccccCCccEEEEecCccccccc--ceEEEEeccccccccchhhhHHHHHHhhhhcccCCchHHHHHHHHH
Confidence            1110        11234789999999887543  454443 2            2233333333344445544333333 


Q ss_pred             --HHccCChHHHHHHHHHHHHHHHHHHHccCCCCcc----------------------------------------cCCC
Q 014594          324 --AALQNPIYLEVKEALIKERERLFKLLKDVPFLNP----------------------------------------YPSY  361 (422)
Q Consensus       324 --~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~----------------------------------------~p~~  361 (422)
                        ..+......+..++..++.+++++.+++++....                                        ....
T Consensus       301 a~~~~~~~~g~~l~~~~~~~a~~~r~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (462)
T d1c4ka2         301 NAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDN  380 (462)
T ss_dssp             HHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTT
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccccccccccchHhhhcccchhccCCcchhccccccCcc
Confidence              2332222222556666777777777766542210                                        0000


Q ss_pred             ceE-----EEEEeC-----------CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          362 SNF-----ILCEVT-----------SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       362 ~~f-----~~~~~~-----------~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      ...     +.+..+           .+..+..+.+.|+++||.+...+    .+.||++++   +.+++|+|.++|+++
T Consensus       381 ~~~~Dp~k~~l~~~gi~~~~g~~~~~G~~~~~~~~~L~~~gI~~e~~~----~~~i~~~~s~~~T~edid~li~aL~ei  455 (462)
T d1c4ka2         381 QYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKSD----LNSILFLMTPAETPAKMNNLITQLLQL  455 (462)
T ss_dssp             CEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEEC----SSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             ceecccceeEEecCCccccccchhhcCCcHHHHHHHHHHcCCeeeccC----CCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            010     233322           13467888999999999765433    578999986   577889999998876

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.5e-15  Score=145.87  Aligned_cols=313  Identities=13%  Similarity=0.078  Sum_probs=206.0

Q ss_pred             CCCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CCCC---C-CCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP---Y-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~---~-~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      +.+++.+||+..+.  ..++ .+|++.+|+.+ ++..   . .+.......+.+.+++..+.  +.+++++++++|.+.+
T Consensus        37 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Av~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~sGseA~e~A  114 (404)
T d2byla1          37 DVEGRKYFDFLSSISAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLFNY--HKVLPMNTGVEAGETA  114 (404)
T ss_dssp             ETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCCTTEEESSHHHHHHHHHHHHTC--SEEEEESSHHHHHHHH
T ss_pred             ECCCCEEEEecCCHHHHhhcCCCHHHHHHHHHHHhhCCCcccccccchHHHHHHhhhhcccc--cccccccCccccchhH
Confidence            45678899998763  3333 57899998876 3321   1 12223355677777777764  6899999999999999


Q ss_pred             HHHhc----------CCCCEEEEcCCCchhHHHHHHHcC-------------CEEEEecCCCCCCCCHHHHHHHhhcCCC
Q 014594          163 MRCVL----------DPGDKIVDCPPTFTMYEFDAAVNG-------------AAVVKVPRKSDFSLNVELIADAVEREKP  219 (422)
Q Consensus       163 ~~~l~----------~~gd~Vl~~~p~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~  219 (422)
                      ++...          .....++...-.|+.....+....             ..+..+|     ..|++++++.+..++.
T Consensus       115 ik~ar~~~~~~~~~~~~~~~i~~~~~~~hg~t~~~~~~~~~~~~~~~~~p~~~~~~~~p-----~~d~~~l~~~l~~~~i  189 (404)
T d2byla1         115 CKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIP-----YNDLPALERALQDPNV  189 (404)
T ss_dssp             HHHHHHHHHHTTCCCTTCCEEEEETTCCCCCSHHHHTTCCCHHHHTTSCSCCTTEEEEC-----TTCHHHHHHHHTSTTE
T ss_pred             HHHHHHHhhhccccccccccccccCCCccccccceeccCCCcccccCCCCCCCCeeEec-----ccCHHHHHHhcCCCCe
Confidence            98532          122467777777753222221111             1233333     2478999999976778


Q ss_pred             eEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhhcccc-cc
Q 014594          220 KCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG-LR  291 (422)
Q Consensus       220 ~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~G-~r  291 (422)
                      .+|++.......|...+    .++++++|+. |+++|+||++..|...+..  ....+-.++++   +++|.++ .| +.
T Consensus       190 AaviiEPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~a~~~~gv~PDi~---~~gK~l~-gG~~p  265 (404)
T d2byla1         190 AAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIV---LLGKALS-GGLYP  265 (404)
T ss_dssp             EEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG-TTSSC
T ss_pred             EEEEECCccCCCCCccCCHHHHHHHHHHHHhcCeEEEeeccccccccccccchhhhcCCCCCEE---EECchhh-CCCcc
Confidence            88888766666787766    5667777777 9999999999988643322  22222334444   5789998 55 89


Q ss_pred             ceeeecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCC--CcccCCCceEEEE
Q 014594          292 VGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPF--LNPYPSYSNFILC  367 (422)
Q Consensus       292 ~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~p~~~~f~~~  367 (422)
                      +|.+++++++.+.+....  .+|+.++++.+++.+.|+.-+-.+..++.++..+++.+.|+++..  +......|.+..+
T Consensus       266 ~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~i~~vRg~Gl~~~i  345 (404)
T d2byla1         266 VSAVLCDDDIMLTIKPGEHFSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLPSDVVTAVRGKGLLNAI  345 (404)
T ss_dssp             CEEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTSCTTTEEEEEEETTEEEE
T ss_pred             ceeeeechhhhhccCCCCCCcCCCcCHHHHHHHHHHHHHHHhcCchhhhhHhhHHHHHHHHhhccccceeeeecccEEEE
Confidence            999999999887664333  346788999999998886321111666677777888888877532  1112345566666


Q ss_pred             EeCC--CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHH
Q 014594          368 EVTS--GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECL  418 (422)
Q Consensus       368 ~~~~--~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al  418 (422)
                      .+.+  ..+..++.+.|.++||++.+..    .+.+|++..   +++++|++.+++
T Consensus       346 ~~~~~~~~~~~~~~~~l~~~Gvl~~~~~----~~~i~l~PpL~it~~~id~~~~~l  397 (404)
T d2byla1         346 VIKETKDWDAWKVCLRLRDNGLLAKPTH----GDIIRFAPPLVIKEDELRESIEII  397 (404)
T ss_dssp             EECCCSSCCHHHHHHHHHHTTEECEEEE----TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred             EEecCCchhHHHHHHHHHhCCeEEecCC----CCEEEEECCcCCCHHHHHHHHHHH
Confidence            6643  4567789999999999998753    478999965   344444444433

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.69  E-value=4.4e-15  Score=144.92  Aligned_cols=287  Identities=13%  Similarity=0.009  Sum_probs=181.2

Q ss_pred             HHHHHHHHcCCCC-CCEEEeCCHHHHH-HHHHHHh---cCCCCEEEEcCCCchhHHHHHHHcCCEEEEec---CCCCCCC
Q 014594          134 LRAALAKDSGLES-DHILVGCGADELI-DLIMRCV---LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP---RKSDFSL  205 (422)
Q Consensus       134 lr~~la~~~~~~~-~~i~~~~G~~~al-~~~~~~l---~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---~~~~~~~  205 (422)
                      +.+.+++.+|.+. ...++++|+++.. .+++.+.   ..+++.|+++...|......+...|++++.|+   .++++.+
T Consensus        99 ~~~~~~~l~g~~~~~~~~~~~~~t~~~~~~~l~a~~~~~~~~~~vi~~~~~H~s~~~a~~~~g~~~~~v~~~~~~~~~~i  178 (445)
T d3bc8a1          99 LVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDELRT  178 (445)
T ss_dssp             HHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEEC
T ss_pred             HHHHHHHHhCCCcccCccccccchHHHHHHHHHHHHHhCCCCCEEEEcCcccHHHHHHHHHcCCeeEEEEeeccCccccc
Confidence            4455666678754 4566667666544 3334433   35678999999999999999999999998886   3566789


Q ss_pred             CHHHHHHHhhc---CCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCC-Cchhh-hhhcCCcEEEEc
Q 014594          206 NVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-ESRME-WVKKHDNLIVLR  279 (422)
Q Consensus       206 d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~-~~~~~-~~~~~~~~i~~~  279 (422)
                      |+++|++++++   +++.+|++++|+|++|.+.+.+++.+||+. |+++++|++|..+... ..... .....+..++..
T Consensus       179 d~~~l~~~i~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~vd~~~~  258 (445)
T d3bc8a1         179 DLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQ  258 (445)
T ss_dssp             CHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CHHHHHHHHHhccccCeEEEEEeCCCCCCeeehhHHHHHHHHHHhCCcEEEEccchhhhhhccccchhccCcCCcceEEe
Confidence            99999999863   367888889999999999999999999998 9999999999854311 11111 111233447788


Q ss_pred             cChhhhccccccceeeec-CHHHHHHHHHhcCCCCCcH--HHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHcc----C
Q 014594          280 TFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYNVSV--AAEVAACAALQNPIYLEVKEALIKERERLFKLLKD----V  352 (422)
Q Consensus       280 S~SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~~~~~~~--~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~----~  352 (422)
                      |.+|.++.|. ..|+++. +.++.+.+......+....  ..+.+....+....+....+...++.+++.+.|++    .
T Consensus       259 s~hK~~~~p~-g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~L~~l~~~~  337 (445)
T d3bc8a1         259 SLDKNFMVPV-GGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAH  337 (445)
T ss_dssp             EHHHHHSCCS-SCEEEEESCHHHHHHHHHHSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCccccccCC-CCceeeeCChHHHHHHHHHHhhcccCcchHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHHhhc
Confidence            8899876443 4556655 5677777765554443322  33333333333333333444455555555555544    2


Q ss_pred             CCCcc-cCCCceEEEEEeC-----CCCCHHHHHHHHHhCCcEEEe-----------------CCC---CCCCCeEEEEec
Q 014594          353 PFLNP-YPSYSNFILCEVT-----SGMDAKKLKDDLAKMGVMIRH-----------------YNN---KELKGYVRVSVG  406 (422)
Q Consensus       353 ~~~~~-~p~~~~f~~~~~~-----~~~~~~~~~~~L~~~gI~v~~-----------------~~~---~~~~~~iRis~~  406 (422)
                      +.... .+......++.+.     ...+..++...|.+.||....                 +..   .....++|++++
T Consensus       338 ~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~gI~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~i~i~~~  417 (445)
T d3bc8a1         338 NERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAA  417 (445)
T ss_dssp             TCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEECC
T ss_pred             CceeecCCCCCcceEEEeeeccccCCCCHHHHHHHHHHcCCCcceeeccccccchhhhhhhhcCCCCccCCCCeEEEeCc
Confidence            32222 2344445555443     134566788888888874211                 110   112357999876


Q ss_pred             ---ChhhHHHHHHHHhhh
Q 014594          407 ---KPEHTDALMECLMHL  421 (422)
Q Consensus       407 ---~~~~~~~l~~al~~l  421 (422)
                         +.+|+|.+.++|+++
T Consensus       418 ~~~T~eDID~~v~~L~ki  435 (445)
T d3bc8a1         418 IGMKMQDVDLFIKRLDKC  435 (445)
T ss_dssp             TTCCHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHH
Confidence               456677777776653

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=99.69  E-value=1.4e-15  Score=149.46  Aligned_cols=320  Identities=13%  Similarity=0.094  Sum_probs=194.4

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC--
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD--  171 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd--  171 (422)
                      ...|||-+........+....++...+  ..| ++++..+|++++++++|.  ++++++++|++|...+++.++++|+  
T Consensus        42 ~~~id~~sd~~t~~~~~~~~a~~~~gd--~~y~~~~~~~~le~~~a~l~g~--~~~~~~~sGt~A~~~a~~~~~~~g~~~  117 (465)
T d1ax4a_          42 AVYIDLLTDSGTNAMSDHQWAAMITGD--EAYAGSRNYYDLKDKAKELFNY--DYIIPAHQGRGAENILFPVLLKYKQKE  117 (465)
T ss_dssp             GCSEECSCSSSCCCEEHHHHHHHHTCC--CCSSSCHHHHHHHHHHHHHHCC--CEEEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred             CeeeecccccchhhhhHHHHHHHhhhh--hhhccChHHHHHHHHHHHHHCC--CEEEECCCcHHHHHHHHHHHHHHHHhc
Confidence            345788554332222344444443322  346 566788999999999996  6899999999999999998876543  


Q ss_pred             -----EEEEcCCCchhHHHHHHHcCCEEEEecC----------CCCCCCCHHHHHHHhhc---CCCeEEEEeCCCCccC-
Q 014594          172 -----KIVDCPPTFTMYEFDAAVNGAAVVKVPR----------KSDFSLNVELIADAVER---EKPKCIFLTSPNNPDG-  232 (422)
Q Consensus       172 -----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~----------~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG-  232 (422)
                           .++.....|..+.......|..++.+..          +..+.+|++++++++++   ..+.+++++.++|..| 
T Consensus       118 ~~~~~~~i~~~~h~~t~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~~~~~~~~g~  197 (465)
T d1ax4a_         118 GKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGG  197 (465)
T ss_dssp             TCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTS
T ss_pred             CCCCCeEEeccchhhhhHHHHHHcCCeeecccccccCCCCCCCCccCccCHHHHHHHHHhhccccccceeeccccccCce
Confidence                 3455555566666677778998887641          23467899999999864   2345666666666654 


Q ss_pred             cCCCHHHHHHHHc---C-CCeEEEccCCcccc-----------CCCchh---hhhhcCCcEEEEccChhhhcccccccee
Q 014594          233 SIINDEDLLKILE---M-PILVVLDEAYTEFS-----------GLESRM---EWVKKHDNLIVLRTFSKRAGLAGLRVGY  294 (422)
Q Consensus       233 ~~~~~e~l~~i~~---~-~~~li~Deay~~~~-----------~~~~~~---~~~~~~~~~i~~~S~SK~~~~~G~r~G~  294 (422)
                      .+++.+.+++|.+   . |+++|+|++|....           .+....   ..+... ..++..|.+|.  ..|.+.|+
T Consensus       198 ~~~~~~~l~~i~~~~~~~g~~l~~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~d~~s~s~~k~--~~~~~~g~  274 (465)
T d1ax4a_         198 QPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKY-ADALTMSAKKD--PLLNIGGL  274 (465)
T ss_dssp             BCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGG-CSEEEEETTST--TCCSSCEE
T ss_pred             ecCCHHHHHHHHHHHHHcCCEEEEECcchhhhhcccccccccccccchhhhccccccc-cceeEeecccC--ccccccee
Confidence            5678887776654   4 99999999986321           000110   111111 12444456664  45667899


Q ss_pred             eecCHH--HHHHHHH---h-cC---CCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCceEE
Q 014594          295 GAFPLS--IIEYLWR---A-KQ---PYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYSNFI  365 (422)
Q Consensus       295 i~~~~~--~~~~l~~---~-~~---~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~  365 (422)
                      ++++.+  .......   . ..   ..........++...+......+..++..++.+++.+.|++++...+.+.+++++
T Consensus       275 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~l~~~L~~~g~~~v~~~~~~~~  354 (465)
T d1ax4a_         275 VAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLREAGIPIQYPTGGHAV  354 (465)
T ss_dssp             EEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTTCCBCSSCCSSEE
T ss_pred             EeecchHHHHHhhhccccccccCCCcchhhHHHHHHHhhhhHHhhhHHHHHHHHHHHHHHHHHHHhhcCccccCCCccee
Confidence            888643  2222211   1 11   1233444444444433322111244455566788999999887666667777777


Q ss_pred             EEEeCC--------CCCHHHHHHH-HHhCCcEEEeCCC-------------CCCCCeEEEEec----ChhhHHHHHHHHh
Q 014594          366 LCEVTS--------GMDAKKLKDD-LAKMGVMIRHYNN-------------KELKGYVRVSVG----KPEHTDALMECLM  419 (422)
Q Consensus       366 ~~~~~~--------~~~~~~~~~~-L~~~gI~v~~~~~-------------~~~~~~iRis~~----~~~~~~~l~~al~  419 (422)
                      ++....        ......+... +.+.||.......             +...+.+|+++.    +.+++|.+.++++
T Consensus       355 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~GI~~~~~~~~~~~~~~~~g~~~~~~~~~vRlalP~~~~T~eeiD~vv~~l~  434 (465)
T d1ax4a_         355 FVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALI  434 (465)
T ss_dssp             EEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHH
T ss_pred             eeehhhhcCCCccccchhHHHHHHHHHhcCceeccccccccccccccCCccCCCCCceEEeCCCCCCCHHHHHHHHHHHH
Confidence            776531        1123444444 4488987653211             233568999864    4677888888887


Q ss_pred             hh
Q 014594          420 HL  421 (422)
Q Consensus       420 ~l  421 (422)
                      .+
T Consensus       435 ~v  436 (465)
T d1ax4a_         435 GL  436 (465)
T ss_dssp             TT
T ss_pred             HH
Confidence            64

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=99.67  E-value=4.3e-15  Score=141.94  Aligned_cols=314  Identities=15%  Similarity=0.141  Sum_probs=203.8

Q ss_pred             CCCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~----~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      ..+++++||+..+  .+.++ .+|++.+++.+ +...    ..++.+...++.+.+.+......+.+.+++++++|++.+
T Consensus        33 d~dG~~ylD~~~g~~~~~lGh~hp~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~A  112 (387)
T d1vefa1          33 DAEGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQTLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAA  112 (387)
T ss_dssp             ETTSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTSCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHH
T ss_pred             ECCCCEEEEcchhHHhhhhcCCcHHHHHHHHHHHHhhcccccccCCchHHHHHHHhhhhccccceeeccccCchHHHHHH
Confidence            3467889999764  44554 57999988876 3211    122222233444555554443345799999999999999


Q ss_pred             HHHh--cCCCCEEEEcCCCchhHHHHHHH-cC------------CEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCC
Q 014594          163 MRCV--LDPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP  227 (422)
Q Consensus       163 ~~~l--~~~gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p  227 (422)
                      ++..  .....+|+....+|++....+.. .|            ..+..+|.     -|.+.+++.+. +++.+|++...
T Consensus       113 ik~Ar~~t~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~p~~~~~~~~p~-----~d~~~l~~~~~-~~iAavi~EPi  186 (387)
T d1vefa1         113 LKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-----NDVEALKRAVD-EETAAVILEPV  186 (387)
T ss_dssp             HHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-----TCHHHHHHHCC-TTEEEEEECSE
T ss_pred             HHHHHhhcccceecccccCCCCCccceEeccCCccccCCCCCCCCCceEeCC-----CCHHHHHHhcC-CCeEEEEEECC
Confidence            9853  22337888888888654333322 22            12334442     37899999997 68888888765


Q ss_pred             CCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCc--hhhhhhcCCcEEEEccChhhhccccccceeeecCHH
Q 014594          228 NNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (422)
Q Consensus       228 ~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~  300 (422)
                      ....|...+    .++++++|+. |+++|.||++..|...+.  .....+..+++++   ++|.++ .|+.++.+++..+
T Consensus       187 ~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~~~~~~~v~PDi~~---~gK~l~-gG~~~~~~~~~~~  262 (387)
T d1vefa1         187 QGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDILT---LAKALG-GGVPLGVAVMREE  262 (387)
T ss_dssp             ETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEE---ECGGGG-TTSSCEEEEEEHH
T ss_pred             CCCCCCccCCHHHHHHHHHHHHHcCceEEecccccccCccCCCcccccCCcCCceee---ecccCC-CCcccccccccee
Confidence            666787655    5666666766 999999999998854332  2233334444443   579987 7888898998888


Q ss_pred             HHHHHHHhc--CCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcc--cCCCceEEEEEeCCCCCHH
Q 014594          301 IIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNP--YPSYSNFILCEVTSGMDAK  376 (422)
Q Consensus       301 ~~~~l~~~~--~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~~f~~~~~~~~~~~~  376 (422)
                      +.+.+....  .+|+.++++..++.+.|+.-+-.+..+++++.-+++.+.|+++....+  ....|.+..+++.+ ....
T Consensus       263 ~~~~~~~~~~g~T~~gnPla~aaa~a~L~~l~~~~~~~~v~~~g~~l~~~L~~l~~~~v~~vrg~Gl~~~ie~~~-~~~~  341 (387)
T d1vefa1         263 VARSMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVGLELKE-KAAP  341 (387)
T ss_dssp             HHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEEEEESS-CSHH
T ss_pred             eeeccccCCccccCCCCcchhhhcccchhhcccccccchHhhhhHHHHHHHHhcCCCceEEEeecceEEEEEEeC-CchH
Confidence            877654332  347789999999988885422111566677777888888887632222  23456677788863 3456


Q ss_pred             HHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          377 KLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       377 ~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      .+.+.+.++|+.+.+..    ++.+|++.+   +.++++++.++++
T Consensus       342 ~~~~~~~~~g~l~~~~g----~~~ir~~Ppl~it~~~ld~~~~~i~  383 (387)
T d1vefa1         342 YIARLEKEHRVLALQAG----PTVIRFLPPLVIEKEDLERVVEAVR  383 (387)
T ss_dssp             HHHHHHHHHCEECEESS----TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCeEEecC----CCEEEEECCccCCHHHHHHHHHHHH
Confidence            67777778898877654    478999865   3444444444443

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=99.66  E-value=1.7e-14  Score=138.62  Aligned_cols=318  Identities=14%  Similarity=0.089  Sum_probs=199.6

Q ss_pred             CCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-CCC-CCCCCC--c-chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 014594           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF-PYIYPD--P-ESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (422)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~-~~~y~~--~-~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~  163 (422)
                      .+++.+||+..+  ...++ .+|++.+|+.+ +.. .+.++.  . ....+.+.+++..+.  +.+.++++++++.+.++
T Consensus        36 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~sgs~a~~~a~  113 (404)
T d1z7da1          36 VNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSRAFFSVPLGICERYLTNLLGY--DKVLMMNTGAEANETAY  113 (404)
T ss_dssp             TTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEEHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHH
T ss_pred             CCCCEEEEccccHHHHhhhcCcHHHHHHHHHHHHhCCCcccccchHHHHHHHHhhhhcccc--ceeeeeccccchHHHHH
Confidence            467889998776  34454 58999999875 322 111111  1 234555566666663  68999999999999988


Q ss_pred             HHhc----------CCCCEEEEcCCCchhHHHHHHHc-CCEEE---EecCCCC----CCCCHHHHHHHhhcCCCeEEEEe
Q 014594          164 RCVL----------DPGDKIVDCPPTFTMYEFDAAVN-GAAVV---KVPRKSD----FSLNVELIADAVEREKPKCIFLT  225 (422)
Q Consensus       164 ~~l~----------~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~---~v~~~~~----~~~d~~~l~~~i~~~~~~~i~l~  225 (422)
                      +...          .....++.....|+......... +....   ..|....    ..-+.+.++..+..+++.+|++.
T Consensus       114 k~ar~~~~~~~~~~~~~~~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~E  193 (404)
T d1z7da1         114 KLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYDDLEALEEELKDPNVCAFIVE  193 (404)
T ss_dssp             HHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECTTCHHHHHHHHTSTTEEEEEEC
T ss_pred             HHHHHHHhhcccccccccccccccccCCCCcccccccccccccccCCCCCCccccccccchHHHHHHHhcCCCEEEEEEE
Confidence            7532          11246777777776443332221 11110   0110000    12357888888876678888888


Q ss_pred             CCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCc--hhhhhhcCCcEEEEccChhhhccccccceeeecC
Q 014594          226 SPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (422)
Q Consensus       226 ~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~  298 (422)
                      ..+...|...+    .++++++|+. |+++|+||++..|...+.  .....+..++++   +++|.++..+..+|.++++
T Consensus       194 Pi~g~~G~~~~~~~fl~~l~~lc~~~g~llI~DEV~tGfgRtG~~~~~e~~gv~PDiv---t~gK~l~gG~~p~~~v~~~  270 (404)
T d1z7da1         194 PIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVI---LLGKALSGGHYPISAVLAN  270 (404)
T ss_dssp             SSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGGTTSSCCEEEEEC
T ss_pred             EEcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccCCCcccccccccccCCCCCEE---EEcccccCCCCCcccccch
Confidence            77777888887    6888888887 999999999998854332  222333344444   5689998433889999999


Q ss_pred             HHHHHHHHHhc--CCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceEEEEEeCC-
Q 014594          299 LSIIEYLWRAK--QPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-  371 (422)
Q Consensus       299 ~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f~~~~~~~-  371 (422)
                      +++.+.+....  .+|+.++++.+++.+.|+.   ++..+ ..+.-....+.+.+.+++.+.+.-....|.+..+.+.+ 
T Consensus       271 ~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~  350 (404)
T d1z7da1         271 DDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNE  350 (404)
T ss_dssp             HHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECTT
T ss_pred             HHHHccCCCCCcCcCCCCCcchhhhhhhhhhhhhcchhhhhhccchhHHHHHHHHHHhcCCCeEEEEeeCcEEEEEEcCC
Confidence            99987665443  2377899999999888763   34444 44444555566666677776544344566777788764 


Q ss_pred             CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHH
Q 014594          372 GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECL  418 (422)
Q Consensus       372 ~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al  418 (422)
                      ..+..++...|.++||.+.+..    ++.|||..+   ++++++++.+++
T Consensus       351 ~~~~~~~~~~l~~~Gl~~~~~~----~~~ir~~Ppl~it~~~id~~~~~l  396 (404)
T d1z7da1         351 LVNVLDICLKLKENGLITRDVH----DKTIRLTPPLCITKEQLDECTEII  396 (404)
T ss_dssp             TCCHHHHHHHHHHTTEECCEET----TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHhCCeEEecCC----CCEEEEECCcCCCHHHHHHHHHHH
Confidence            3456778899999999987754    478999854   344444443333

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=99.64  E-value=1.9e-14  Score=139.25  Aligned_cols=314  Identities=17%  Similarity=0.119  Sum_probs=191.7

Q ss_pred             CCCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-CCCCCCC--CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 014594           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (422)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~~y--~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~  164 (422)
                      +.+++.+||+..+.  +.++ .+|+|.+++.+ ++....+  +......+.+.+.+..+ ..+.+.+++++++|++.+++
T Consensus        48 D~~G~~ylD~~~~~~~~~lGh~hp~i~~ai~~~~~~~~~~~~~~~~~~~la~~~~~~~~-~~~~v~f~~sGseA~e~Alk  126 (427)
T d2gsaa_          48 DVDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSFGAPCALENVLAEMVNDAVP-SIEMVRFVNSGTEACMAVLR  126 (427)
T ss_dssp             ETTSCEEEESSGGGTTTTTCBTCHHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHH
T ss_pred             ECCCCEEEEechhHHHHhccCCcHHHHHHHHHHHHhcCccccchhHHHHHHHHHHhhCC-ccccccccCCcHHHHHHHHH
Confidence            35678899997763  3443 57999999876 3332222  22234567777777665 34789999999999999999


Q ss_pred             Hhc--CCCCEEEEcCCCchhHHHHH--------HHcCC------------EEEEecCCCCCCCCHHHHHHHhhc--CCCe
Q 014594          165 CVL--DPGDKIVDCPPTFTMYEFDA--------AVNGA------------AVVKVPRKSDFSLNVELIADAVER--EKPK  220 (422)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~~--------~~~g~------------~~~~v~~~~~~~~d~~~l~~~i~~--~~~~  220 (422)
                      ...  ....+|+....+|++....+        ...+.            ....++     ..|++.+++.+++  .+..
T Consensus       127 ~ar~~t~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-----~~~~~~le~~~~~~~~~ia  201 (427)
T d2gsaa_         127 LMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTP-----YNDLEAVKALFAENPGEIA  201 (427)
T ss_dssp             HHHHHHCCCEEEEETTCCCCSCGGGCSSCCHHHHHTTCCSCSSSCHHHHTTEEEEC-----TTCHHHHHHHHTTSTTTEE
T ss_pred             HHHHhcCCCeEEEEecccccCcceeeeecCCcccccCCCCCCCCcccCccceeccC-----cchHHHHHHHHHhCCCCeE
Confidence            542  23477888888886432211        11111            122222     3579999999874  4567


Q ss_pred             EEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCC-chhhhhhcCCcEEEEccChhhhcccccccee
Q 014594          221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY  294 (422)
Q Consensus       221 ~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~-~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~  294 (422)
                      +|++.....-.|.+.+    .+.+++||+. |+++|.||++..|..+. ......+..+++++   ++|.+| .|+.+|.
T Consensus       202 avi~Epi~g~~G~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~r~g~~~~~~~~gi~PDi~~---~gK~lg-gG~p~~a  277 (427)
T d2gsaa_         202 GVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGFRIAYGGVQEKFGVTPDLTT---LGKIIG-GGLPVGA  277 (427)
T ss_dssp             EEEECSSBCSSSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTBTTCHHHHTTCCCSEEE---ECGGGG-TTSCCEE
T ss_pred             EEEEcCCcCCCCCccCCHHHHHHHHHHHHHhceeeeeccccccceecccchHHhcCCCHHHHh---hhhccC-CCcceee
Confidence            8887766666788887    7888888887 99999999999874321 11222333444443   569887 7899999


Q ss_pred             eecCHHHHHHHHHhc-----CCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCc-ccCCCceE
Q 014594          295 GAFPLSIIEYLWRAK-----QPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLN-PYPSYSNF  364 (422)
Q Consensus       295 i~~~~~~~~~l~~~~-----~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f  364 (422)
                      +++++++.+.+....     .+|+.++++.+++.+.|+.   .+..+ ..+.-...++.+.+..++.+... +...++++
T Consensus       278 ~~~~~~i~~~~~~~~~~~~~~T~~gnpla~AAala~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~~~ggm~  357 (427)
T d2gsaa_         278 YGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMF  357 (427)
T ss_dssp             EEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEE
T ss_pred             eeehHHHHHHhcccCCCcCCCCCCCCchhhHHHHHhhHHhhhhhHHhhhhHHHHHHHHHHHHHHhhcCCCcEEcccCCeE
Confidence            999999988765422     3477889998888887753   33333 33333333444444334444322 22223332


Q ss_pred             EEEEeCC--C--------CCH---HHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014594          365 ILCEVTS--G--------MDA---KKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM  419 (422)
Q Consensus       365 ~~~~~~~--~--------~~~---~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~  419 (422)
                       .+.+..  .        .+.   ..+...|+++||++.++..   ..+ -+++. +++++|++.++++
T Consensus       358 -~i~~~~~~v~~~~~~~~~d~~~~~~~~~~ll~~Gv~l~p~~~---~~~-~~~l~~Te~dId~~l~al~  421 (427)
T d2gsaa_         358 -GFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQF---EAG-FTSLAHTEEDIDATLAAAR  421 (427)
T ss_dssp             -EEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT---SCE-ECCTTCCHHHHHHHHHHHH
T ss_pred             -EEEEeccCCCCHHHhhcccHHHHHHHHHHHHHCCEEECCCCC---cce-eCCCCCCHHHHHHHHHHHH
Confidence             222210  1        122   3466778899999887542   122 24443 3445555555554

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=99.64  E-value=3e-14  Score=137.78  Aligned_cols=320  Identities=13%  Similarity=0.111  Sum_probs=203.7

Q ss_pred             CCCCCeEEcCCCC--CCCC-CCHHHHHHHhc-C---CCC--CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-L---KFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~---~~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      .+++.+||+..+.  ..++ .+|++.+++.+ +   .+.  ..++.....++.+++.+..+...+.+.+++++++|++.+
T Consensus        40 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~f~~sGseA~e~A  119 (429)
T d1s0aa_          40 SDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVA  119 (429)
T ss_dssp             TTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCCCSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHH
T ss_pred             CCCCEEEECcccHHHHhhcCCcHHHHHHHHHHHHhcCCcccCCccchHHHHHHHHHHhhhccCcceeeeccccccchhhh
Confidence            4577899998773  3454 68999998875 2   221  122333355677777777766667899999999999999


Q ss_pred             HHHhc-------CCCCEEEEcCCCchhHHHHHHH-cC-------------CEEEEecCC---CCC---CCCHHHHHHHhh
Q 014594          163 MRCVL-------DPGDKIVDCPPTFTMYEFDAAV-NG-------------AAVVKVPRK---SDF---SLNVELIADAVE  215 (422)
Q Consensus       163 ~~~l~-------~~gd~Vl~~~p~y~~~~~~~~~-~g-------------~~~~~v~~~---~~~---~~d~~~l~~~i~  215 (422)
                      ++...       ....+|+....+|+.....+.. .|             ......|..   ...   .-+++.+++.+.
T Consensus       120 ~k~ar~~~~~~g~~~~~ii~~~~~yHG~t~~a~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (429)
T d1s0aa_         120 MKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMA  199 (429)
T ss_dssp             HHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHH
T ss_pred             hhhhhheeecccccccEEEEecCCccccchhhhhhcCCccccccccCccccccccccccccccccccchhhhhhhhhhhh
Confidence            87542       2236788888888644333222 11             112222211   111   223555555443


Q ss_pred             c--CCCeEEEEeCCC-CccCc-CCCHHH---HHHHHcC-CCeEEEccCCccccCCCch--hhhhhcCCcEEEEccChhhh
Q 014594          216 R--EKPKCIFLTSPN-NPDGS-IINDED---LLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRA  285 (422)
Q Consensus       216 ~--~~~~~i~l~~p~-NPtG~-~~~~e~---l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~  285 (422)
                      +  +++.+|++.... +-.|. ..+.+-   ++++|+. |+++|.||++..|...+..  ....+..+++++   ++|.+
T Consensus       200 ~~~~~iaavivEPi~~~~gg~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~~~~~~~v~PDi~~---~gK~l  276 (429)
T d1s0aa_         200 AHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILC---LGKAL  276 (429)
T ss_dssp             HHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEE---ECGGG
T ss_pred             hcCCccceeeecceeccCCCccCCCHHHHHHHHHHHHHcCcceehhhccccccccccccccccceecccccc---ccccc
Confidence            2  567788877443 54555 346544   4445555 9999999999988643322  223333444443   57998


Q ss_pred             ccccccceeeecCHHHHHHHHHh-------cCCCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccC---CCC
Q 014594          286 GLAGLRVGYGAFPLSIIEYLWRA-------KQPYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDV---PFL  355 (422)
Q Consensus       286 ~~~G~r~G~i~~~~~~~~~l~~~-------~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~  355 (422)
                      +..+..+|.+++++++.+.+...       ..+|+.++++.+++.+.|+.-+-.+..++.++..+++.+.|+++   +.+
T Consensus       277 ~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~~v  356 (429)
T d1s0aa_         277 TGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARDAEMV  356 (429)
T ss_dssp             GTSSSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGGGCTTE
T ss_pred             ccccccccchhhHHHHHhccCCCCCcceeecCCCCCCcccchhhhccccccccccccchhhHHHHHHHHHHHHhccCCce
Confidence            74558999999999999887642       23577889999988888863111115555666666777777553   333


Q ss_pred             cccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014594          356 NPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  419 (422)
Q Consensus       356 ~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  419 (422)
                      .-....|.+..+++....+...+.+.|.++|+++++..     +.+|++..   +.+++|++.++++
T Consensus       357 ~~vrg~Gl~~~~e~~~~~~~~~~~~~~~~~Gl~~~~~g-----~~i~~~Ppl~it~~eid~~~~~l~  418 (429)
T d1s0aa_         357 ADVRVLGAIGVVETTHPVNMAALQKFFVEQGVWIRPFG-----KLIYLMPPYIILPQQLQRLTAAVN  418 (429)
T ss_dssp             EEEEEETTEEEEEESSCBCHHHHHHHHHHTTEECCCBT-----TEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             EEEeecccEEEEEecCcccHHHHHHHHHHCCcEEEecC-----CEEEEeCCcCCCHHHHHHHHHHHH
Confidence            22344567777888777788899999999999997754     68999854   4555555555544

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=99.64  E-value=1.5e-14  Score=137.75  Aligned_cols=268  Identities=15%  Similarity=0.107  Sum_probs=184.6

Q ss_pred             HHHHHHHhcCCCCCCCC-CcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCC--CEEEEcCCCchhHHHH
Q 014594          111 PEVREALGQLKFPYIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPG--DKIVDCPPTFTMYEFD  186 (422)
Q Consensus       111 ~~v~~al~~~~~~~~y~-~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~g--d~Vl~~~p~y~~~~~~  186 (422)
                      ++-++++.+......|. .+...++++++++++|.+  +++.+++++.|+.++++++ ..+|  |+|+++.-+|......
T Consensus        12 ~~~~~~v~~~l~~~~~~~G~~v~~fE~~~~~~~g~k--~ai~~~Sgt~Al~~al~al~~~~~~~~eVi~p~~t~~a~~~a   89 (371)
T d2fnua1          12 KEDKKAVLEVLNSKQLTQGKRSLLFEEALCEFLGVK--HALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATANM   89 (371)
T ss_dssp             HHHHHHHHHHHTSSCCSSSHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHHHH
T ss_pred             HHHHHHHHHHHcCCCccCCHHHHHHHHHHHHHHCcC--eEEEEecHHHHHHHHHHHhcccCCCCCeeeccccccccccee
Confidence            44455555532222333 334789999999999964  7899999999999999987 3344  5899999999988888


Q ss_pred             HHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccC-CCc
Q 014594          187 AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LES  264 (422)
Q Consensus       187 ~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~-~~~  264 (422)
                      ....|++++.++.+.+..++.+.+++.+. .++++|+++   +..|...+.+++.++++. ++++|+|.+++.++. .+.
T Consensus        90 i~~~G~~pv~vDi~~~~~~~~~~~~~~~~-~~t~avi~v---h~~G~~~~~~~i~~~~~~~~i~lIEDaaqa~Ga~~~~~  165 (371)
T d2fnua1          90 LLESGYTPVFAGIKNDGNIDELALEKLIN-ERTKAIVSV---DYAGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNK  165 (371)
T ss_dssp             HHHTTCEEEECCBCTTSSBCGGGSGGGCC-TTEEEEEEE---CGGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTE
T ss_pred             eeccCcccccccccccccccchhhhhhcc-chhhccccc---cccccccccccccccccccchhhccchhhccCceeccc
Confidence            88999999999987777778888888886 799999965   468999999999999997 999999999986542 222


Q ss_pred             hhhhhhcCCcEEEEccC--hhhhccccccceeeec-CHHHHHHHHHhcCC------------------CCCcHHHHHHHH
Q 014594          265 RMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAF-PLSIIEYLWRAKQP------------------YNVSVAAEVAAC  323 (422)
Q Consensus       265 ~~~~~~~~~~~i~~~S~--SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~~------------------~~~~~~~~~aa~  323 (422)
                      .....+  +  +.+.||  +|.++. | ..|.+++ ++++.+++......                  +.++.+..+.+.
T Consensus       166 ~~G~~g--~--~~~~Sf~~~K~l~~-g-~GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~G~n~r~sel~Aaigl  239 (371)
T d2fnua1         166 KVGGFA--L--ASVFSFHAIKPITT-A-EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGL  239 (371)
T ss_dssp             ETTSSS--S--EEEEECCTTSSSCC-S-SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHH
T ss_pred             cCCccc--c--cccccccccccccc-c-cceEEEeechhhhhhcccccccccccccccccccccccccccccchhhhhhh
Confidence            222221  1  445565  788763 3 2677777 46778877754421                  234555555566


Q ss_pred             HHccCChHHHHHHHHHHHHHHHHHHHccCCCCccc---CC--CceE-EEEEeCC--CCCHHHHHHHHHhCCcEEEeC
Q 014594          324 AALQNPIYLEVKEALIKERERLFKLLKDVPFLNPY---PS--YSNF-ILCEVTS--GMDAKKLKDDLAKMGVMIRHY  392 (422)
Q Consensus       324 ~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---p~--~~~f-~~~~~~~--~~~~~~~~~~L~~~gI~v~~~  392 (422)
                      ..|+.-+  +..++-+++.+++.+.|.+.+.+...   +.  ..++ ..+.+..  ..+.+++.+.|.++||.++..
T Consensus       240 ~qL~~l~--~~~~~R~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~L~~~gI~~~~~  314 (371)
T d2fnua1         240 SQLKKAP--FLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVH  314 (371)
T ss_dssp             HHHTTHH--HHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBCC
T ss_pred             hhhhhcc--chhhhhhhhhhhhcccccccccccccccccccccccccccccccccchhHHHHHHHHHHHCCCCccee
Confidence            6665421  14444556667777888877654421   11  1222 2233332  234578999999999998754

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=99.62  E-value=1.5e-13  Score=133.23  Aligned_cols=324  Identities=15%  Similarity=0.115  Sum_probs=200.4

Q ss_pred             CCCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-C---CCC-CCCCCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 014594           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-L---KFP-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (422)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~---~~~-~~y~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~  162 (422)
                      ..+++.+||+..+  ...++ .+|++.+++.+ +   .+. ..++.....++-+.|.+...-..+.+++++++++|++.+
T Consensus        37 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~sGseA~e~A  116 (431)
T d1zoda1          37 DADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLFSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAA  116 (431)
T ss_dssp             CTTCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHH
T ss_pred             ECCCCEEEEcccCHHhhhhcCCCHHHHHHHHHHHhhccccccccccHHHHHHHHHHHHhCCcccceeeecccccchHHHH
Confidence            4567889999776  44454 56899888876 2   221 233444456777778877654457999999999999999


Q ss_pred             HHHh--cCCCCEEEEcCCCchhHHHHHHHcCC------------EEEEecCCCCC---------CCCH---HHHHHHhh-
Q 014594          163 MRCV--LDPGDKIVDCPPTFTMYEFDAAVNGA------------AVVKVPRKSDF---------SLNV---ELIADAVE-  215 (422)
Q Consensus       163 ~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~------------~~~~v~~~~~~---------~~d~---~~l~~~i~-  215 (422)
                      ++..  ....++|+.....|++....+...+.            ....++....+         ..+.   +.++..+. 
T Consensus       117 lk~Ar~~t~r~~i~~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (431)
T d1zoda1         117 IRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDR  196 (431)
T ss_dssp             HHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCcceeecccccccccchhhcccccccccccCCcccCceeeeeecccccccccccchhhhhhHHHHHHHHHH
Confidence            9953  22347888888888765544433211            12233211110         0122   33333321 


Q ss_pred             --cCCCeEEEEeCCCCccCcCCC----HHHHHHHHcC-CCeEEEccCCccccCCCc--hhhhhhcCCcEEEEccChhhhc
Q 014594          216 --REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAG  286 (422)
Q Consensus       216 --~~~~~~i~l~~p~NPtG~~~~----~e~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~~~S~SK~~~  286 (422)
                        ..++.+|++.....-.|.+.+    .++++++|+. |+++|.||++..|...+.  .....+-.+.+++   ++|.++
T Consensus       197 ~~~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~gRtG~~~~~~~~gv~PDi~~---~gK~l~  273 (431)
T d1zoda1         197 QSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILT---LSKTLG  273 (431)
T ss_dssp             HCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEE---ECHHHH
T ss_pred             hccccccceeeccccccCCccCCCHHHHHHHHHHHHhcCceEEeccccccccccccccccccCCCCcchhc---cccccc
Confidence              246778888765555666654    5677777777 999999999998754332  2223333444443   579998


Q ss_pred             cccccceeeecCHHHHHHHHHhc----CCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCccc
Q 014594          287 LAGLRVGYGAFPLSIIEYLWRAK----QPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPY  358 (422)
Q Consensus       287 ~~G~r~G~i~~~~~~~~~l~~~~----~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~  358 (422)
                       .|+.++.+++.+++.+......    ..++.++++.+++.+.|+.   ++..+ ..+.-....+.+.+.+.+.+.+.-.
T Consensus       274 -gG~p~~av~~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~i~~v  352 (431)
T d1zoda1         274 -AGLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDV  352 (431)
T ss_dssp             -TTSSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred             -cccccceeeeeecchhhhhcccccccCCCCCCcchHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhhhcCCCeEEE
Confidence             7889999999998887776533    2467888888888877653   34444 4334444455555555666654433


Q ss_pred             CCCceEEEEEeC--------CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHH
Q 014594          359 PSYSNFILCEVT--------SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECL  418 (422)
Q Consensus       359 p~~~~f~~~~~~--------~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al  418 (422)
                      ...|.+.-+++.        ...-...+.+.+.++|+..........++.||++.+   +++++|++.+++
T Consensus       353 rG~Glm~~ie~~~~~~~~~~~~~~~~~i~~~~~~~Gl~~~~~~~~~~~~~i~l~Ppl~it~~eid~~~~~l  423 (431)
T d1zoda1         353 RGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLL  423 (431)
T ss_dssp             EEETTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHH
T ss_pred             eecceEEEEEEecCCcccCccHHHHHHHHHHHHHhCcccCeeeecCCCCEEEEECCCCCCHHHHHHHHHHH
Confidence            455666555552        111256788889999987654333445689999975   344444444433

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=99.62  E-value=2.4e-15  Score=142.71  Aligned_cols=304  Identities=13%  Similarity=0.035  Sum_probs=184.7

Q ss_pred             CCCCCCCHHHHHHHhcC-CC-----------CCCCCCc--chHHHHHHHHHHcCCCCC-CEEEeCCHHH-HHHHHHHHhc
Q 014594          104 ENPYGPPPEVREALGQL-KF-----------PYIYPDP--ESRRLRAALAKDSGLESD-HILVGCGADE-LIDLIMRCVL  167 (422)
Q Consensus       104 ~~~~~~~~~v~~al~~~-~~-----------~~~y~~~--~~~~lr~~la~~~~~~~~-~i~~~~G~~~-al~~~~~~l~  167 (422)
                      ..|...|++|+++|.+. ..           +|+-+..  -+.+.|+.|+++++.+.+ .|++++|++. ++++++..+.
T Consensus         9 pGP~~vp~~V~eam~~~~~~~~~~~~~~~~~sHRs~ef~~~~~~~r~~l~~l~~~~~~~~i~~~~gs~t~~~ea~~~~l~   88 (361)
T d2c0ra1           9 AGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFL   88 (361)
T ss_dssp             SSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHC
T ss_pred             CCCcCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHhccc
Confidence            35666789999999862 11           1232222  156889999999998544 6777777654 4566666778


Q ss_pred             CCCCEEEEcCCCc--hhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHc
Q 014594          168 DPGDKIVDCPPTF--TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE  245 (422)
Q Consensus       168 ~~gd~Vl~~~p~y--~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~  245 (422)
                      .+|+++++..-..  ..+...++..|..+..+..+.+...+++.+++.+...  +...   .+|.||.+.+.+++.++++
T Consensus        89 ~~~~~~l~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---v~~~tg~~~~~~~i~~~~~  163 (361)
T d2c0ra1          89 KEGQTANYVMTGSWASKALKEAKLIGDTHVAASSEASNYMTLPKLQEIQLQD--NAAY---LHLTSNETIEGAQFKAFPD  163 (361)
T ss_dssp             CTTCEEEEEECSHHHHHHHHHHHHHSCEEEEEECGGGTTCSCCCGGGCCCCT--TEEE---EEEESEETTTTEECSSCCC
T ss_pred             cCCCceEEEeechhhhhhhhhhhhcCceeeeeccccccccchhhhhhhcccC--cceE---EEEecccceecceEEEeec
Confidence            8888887655433  2556677889999988887666678888888777532  3333   4577999999999988888


Q ss_pred             C-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHH------------HHHHHh-cCC
Q 014594          246 M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII------------EYLWRA-KQP  311 (422)
Q Consensus       246 ~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~------------~~l~~~-~~~  311 (422)
                      . |+++++|.+.+.....-    ..+..+  +.+.|.+|.++.+|. .|+++..+.+.            ...... ...
T Consensus       164 ~~~al~~vDavss~g~~~i----d~~~~d--i~~~s~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (361)
T d2c0ra1         164 TGSVPLIGDMSSDILSRPF----DLNQFG--LVYAGAQKNLGPSGV-TVVIVREDLVAESPKHLPTMLRYDTYVKNNSLY  236 (361)
T ss_dssp             CTTSCEEEECTTTTTSSCC----CGGGCS--EEEEETTTTTCCSSC-EEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCS
T ss_pred             cCCceEEEEeecccccccc----ccccce--eEEEecccccccccC-cEEEEEhHHhhhCcccccccccccccccccccc
Confidence            7 99999999987433211    112222  555677999887763 22222221111            111111 111


Q ss_pred             CCCcHHH---HHHHHHHccCChHHH-HHHHHHHHHHHHHHHHccCCCCc--ccCC---CceEEEEEeCCCCCHHHHHHHH
Q 014594          312 YNVSVAA---EVAACAALQNPIYLE-VKEALIKERERLFKLLKDVPFLN--PYPS---YSNFILCEVTSGMDAKKLKDDL  382 (422)
Q Consensus       312 ~~~~~~~---~~aa~~~L~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~--~~p~---~~~f~~~~~~~~~~~~~~~~~L  382 (422)
                      ...++..   ...+.......+... ..++.++.+..+.+.........  ....   ...-+.+.+|++.+++++.+.|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~~~~~~~~~~~~~~~~~~~L  316 (361)
T d2c0ra1         237 NTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASEELEKEFVKAS  316 (361)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCHHHHHHHHHHH
T ss_pred             ccccceeeehhhhHHHhhhhccchHHHHHHHHHHHHHhhhhhhhcccccccCCChhhccceEEEEECCCcccHHHHHHHH
Confidence            2222211   111111111122222 44455555555555554432221  1111   1234567777777788999999


Q ss_pred             HhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          383 AKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       383 ~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      .++||.++.|...  -+.||||+.   +.+++++|.++|+.+
T Consensus       317 ~~~GI~~~~G~~~--~g~~RIs~~~~~~~edv~~Lv~~l~~~  356 (361)
T d2c0ra1         317 EQEGFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFMEHF  356 (361)
T ss_dssp             HHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             HHCCCEEecCCCc--CCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            9999998887532  134999975   467788888888765

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.62  E-value=2.5e-14  Score=135.75  Aligned_cols=316  Identities=15%  Similarity=0.135  Sum_probs=198.7

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcC---CCCCCCCCc----c---hHHH----HHHHHHHcCCCCC----CEEEeCCHHH
Q 014594           96 DIVKIDANENPYGPPPEVREALGQL---KFPYIYPDP----E---SRRL----RAALAKDSGLESD----HILVGCGADE  157 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~y~~~----~---~~~l----r~~la~~~~~~~~----~i~~~~G~~~  157 (422)
                      +.|.|-..||-.  ++.|++++...   .+..+||..    |   ..++    ++...++|+++..    +|-..+ ++.
T Consensus        28 ~~l~LiaSEN~~--S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~~~~a~w~vNVqp~S-Gs~  104 (463)
T d2a7va1          28 RGLELIASENFC--SRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYS-GSP  104 (463)
T ss_dssp             HSEECCTTCCCC--CHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSS-HHH
T ss_pred             cCeeEeccCCcC--CHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHHhCCCchhccCCccccc-cHH
Confidence            348998888876  58999999762   233444421    1   1222    4556677898766    455544 555


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCchhHHHH--------HHHcCC--EEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEeC
Q 014594          158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFD--------AAVNGA--AVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTS  226 (422)
Q Consensus       158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~--------~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~  226 (422)
                      |...++.+|++|||+|+..++...++...        ....|.  +.+.+..+ .+..+|.+++++...+.+||+|++-.
T Consensus       105 An~av~~all~pgD~Im~l~l~~GGHlshg~~~~~~~~~~~g~~~~~~~Y~~d~~~~~IDyd~~~~~a~~~kPklIi~G~  184 (463)
T d2a7va1         105 ANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGT  184 (463)
T ss_dssp             HHHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECC
T ss_pred             HHHHHHHHHcCCCceEEeeccCcCcccccccccccccccceeeEeeeeeeeccCCCCcCcHHHHHHHHhhcCCceEEecc
Confidence            77778888999999999877766433211        111222  23333333 45679999999999888999999753


Q ss_pred             CCCccCcCCCHHHHHHHHcC-CCeEEEccCCcc-ccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCH-----
Q 014594          227 PNNPDGSIINDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-----  299 (422)
Q Consensus       227 p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~-----  299 (422)
                      -.  .-..++.+++++||+. |.+++.|-+|.. +...+.....+ .+. .++..|.+|.+  +|-|.|.++.+.     
T Consensus       185 S~--y~r~~d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sP~-~~a-Dvvt~tTHKTl--rGPrgGiIl~~~~~~~~  258 (463)
T d2a7va1         185 SA--YARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPF-KHA-DIVTTTTHKTL--RGARSGLIFYRKGVKAV  258 (463)
T ss_dssp             SS--CCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGG-GTC-SEEEEESSGGG--CSCSCEEEEEECSEEEE
T ss_pred             cc--cccccCHHHHHHHhhcccceEEechhhhhHHhhhhhhcChh-hhh-hhhhchhhhhh--cCCCceEEEEccccccc
Confidence            33  3477899999999997 999999999964 22111111111 222 37778999986  788999999865     


Q ss_pred             ----------HHHHHHHHhcCCCC---CcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHccCCCCccc-CCCc
Q 014594          300 ----------SIIEYLWRAKQPYN---VSVAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKDVPFLNPY-PSYS  362 (422)
Q Consensus       300 ----------~~~~~l~~~~~~~~---~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~  362 (422)
                                ++.+++.+.-.|..   +..-..++...++.   .+++.+-.+++.++.+.|.+.|.+.|+..+. ..+.
T Consensus       259 ~~~~~~~~~~~~~~~i~~avFPg~qggph~h~iAa~Ava~~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~~vv~ggTdn  338 (463)
T d2a7va1         259 DPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDN  338 (463)
T ss_dssp             ETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSS
T ss_pred             ccccCccchhHHHHHhhhhcCcccchhhhhhhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCeeecCCCCC
Confidence                      66777777655532   21112222222222   2455557778889999999999998865443 3344


Q ss_pred             eEEEEEeCC-CCCHHHHHHHHHhCCcEEE----eCCC-CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014594          363 NFILCEVTS-GMDAKKLKDDLAKMGVMIR----HYNN-KELKGYVRVSVG-------KPEHTDALMECLMH  420 (422)
Q Consensus       363 ~f~~~~~~~-~~~~~~~~~~L~~~gI~v~----~~~~-~~~~~~iRis~~-------~~~~~~~l~~al~~  420 (422)
                      ..+++++.+ +.+...+.+.|.+.||.+.    |++. +..+..|||+..       .+++++++.+.+.+
T Consensus       339 Hlvlvdl~~~~~~G~~ae~~Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT~a~TtrG~~e~dm~~iA~~I~~  409 (463)
T d2a7va1         339 HLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDE  409 (463)
T ss_dssp             SEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             ceeeeeccccCCCHHHHHHHHHhccCccCCccCCCCCCCCCCCceEeCCHHHHhCCCCHHHHHHHHHHHHH
Confidence            567889853 6788899999999999996    3433 234578999963       35666666666543

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=99.61  E-value=4.1e-14  Score=134.73  Aligned_cols=250  Identities=16%  Similarity=0.066  Sum_probs=170.5

Q ss_pred             chHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHHHcCCEEEEecCCCCCC-CCH
Q 014594          130 ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS-LNV  207 (422)
Q Consensus       130 ~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~-~d~  207 (422)
                      ....|++.+++++|.+  +.+.++++|.|+.++++++ +++||+|++++-+|......+...|++++.++.+++.. .+.
T Consensus        22 ~~~~fE~~~~~~~~~~--~~~~~~SgT~Al~lal~~l~~~~gdeVi~p~~t~~a~~~~~~~~g~~pv~~Di~~~~~~~~~   99 (374)
T d1o69a_          22 FVNRFEQSVKDYSKSE--NALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPICYLKAKPVFIDCDETYNIDVD   99 (374)
T ss_dssp             HHHHHHHHHHHHHCCS--EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHHHHTTCEEEEECBCTTSSBCHH
T ss_pred             HHHHHHHHHHHHHCcC--eEEEeCCHHHHHHHHHHHcCCCCcCEEEeCCcchHhhHHHHhhccceeEecccccccccccc
Confidence            4689999999999964  7999999999999999988 88999999999999988888889999999999765433 333


Q ss_pred             HHHH--HHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcccc-CCCchhhhhhcCCcEEEEccC--
Q 014594          208 ELIA--DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTF--  281 (422)
Q Consensus       208 ~~l~--~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~-~~~~~~~~~~~~~~~i~~~S~--  281 (422)
                      +..+  ..+. .++++|+++   +..|...+.+++.++|+. |+.||+|.+++.++ +.+...+..+    .+.+.||  
T Consensus       100 ~~~~~~~~~~-~~~~aii~~---~~~G~~~d~~~i~~~~~~~~i~vIED~a~a~g~~~~~~~~G~~g----d~~~fSf~~  171 (374)
T d1o69a_         100 LLKLAIKECE-KKPKALILT---HLYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFG----EFGVYSYNG  171 (374)
T ss_dssp             HHHHHHHHCS-SCCCEEEEE---CGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSS----SEEEEECCT
T ss_pred             cccccchhcc-ccccccccc---ccccchhhhHHHHHHhhccCcchhhhhhhhhcceECCeecCCCC----ceEEEeccC
Confidence            3333  3343 689999954   457999999999999997 99999999998654 2233332222    2666676  


Q ss_pred             hhhhccccccceeeec-CHHHHHHHHHhcCC----------------CCCcHHHHHHHHHHccCChHHHHHHHHHHHHHH
Q 014594          282 SKRAGLAGLRVGYGAF-PLSIIEYLWRAKQP----------------YNVSVAAEVAACAALQNPIYLEVKEALIKERER  344 (422)
Q Consensus       282 SK~~~~~G~r~G~i~~-~~~~~~~l~~~~~~----------------~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~  344 (422)
                      +|.++..|  .|.+++ ++++.+++...+..                +.++.+..+.+...|+.-+  +..++-++.++.
T Consensus       172 ~K~l~tge--GG~i~tnn~~~~~~~~~~~~~g~~~~~~~~~~~~G~N~rm~ei~Aaig~~qL~~l~--~~i~~r~~i~~~  247 (374)
T d1o69a_         172 NKIITTSG--GGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLE--QRVLKKREIYEW  247 (374)
T ss_dssp             TSSSCCSS--CEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHH--HHHHHHHHHHHH
T ss_pred             cccccccc--ceeehhhhHHHHHhhccccccccccccccccccCCccccccchhhhhhHHHHhhhh--hhcchhHHHHHH
Confidence            58876433  466666 57788877755321                2245565565666664421  234444556667


Q ss_pred             HHHHHccCCCCcccCCC----c--eEEEEEeC-------------------CCCCHHHHHHHHHhCCcEEEeCC
Q 014594          345 LFKLLKDVPFLNPYPSY----S--NFILCEVT-------------------SGMDAKKLKDDLAKMGVMIRHYN  393 (422)
Q Consensus       345 l~~~L~~~~~~~~~p~~----~--~f~~~~~~-------------------~~~~~~~~~~~L~~~gI~v~~~~  393 (422)
                      +.+.|.+.......+..    .  .++.+...                   ...+.+.+.+.|.++||.++++.
T Consensus       248 y~~~L~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~gI~~r~~y  321 (374)
T d1o69a_         248 YKEFLGEYFSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLW  321 (374)
T ss_dssp             HHHHHTTTEECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCC
T ss_pred             HHhhccccccccccccCCCCChhheeeeeccccccccccccccccchhhccchhhHHHHHHHHHHCCCCEEEeC
Confidence            77777764322211111    1  11222110                   01246789999999999988643

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.59  E-value=2.7e-13  Score=129.00  Aligned_cols=314  Identities=17%  Similarity=0.131  Sum_probs=208.0

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC---CCCCCCCC------cc-hHHHH----HHHHHHcCCCCC----CEEEeCCHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL---KFPYIYPD------PE-SRRLR----AALAKDSGLESD----HILVGCGAD  156 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~y~~------~~-~~~lr----~~la~~~~~~~~----~i~~~~G~~  156 (422)
                      .+-|.|-..||-.  ++.|++++...   .+..+||.      .. ..+++    +...++|+.+++    +|-. .+++
T Consensus        31 ~~~l~LIaSEN~~--S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~~~~~~~~anVqp-~SGs  107 (470)
T d1rv3a_          31 RVGLELIASENFA--SRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQP-YSGS  107 (470)
T ss_dssp             HSSEECCTTCCCC--CHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCC-SSHH
T ss_pred             HcCceEecCCCcC--CHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHHhCCChhhccccccc-cCCc
Confidence            3459998888876  58999999762   23333432      21 23333    344567887643    3333 4566


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCchhHHHH----------HHHcCCEEEEecCC-CCCCCCHHHHHHHhhcCCCeEEEEe
Q 014594          157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----------AAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLT  225 (422)
Q Consensus       157 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----------~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~  225 (422)
                      .|...++.++++|||+|+..+....++...          +.....+.+.++.+ ++..+|.+++++...+.+||+|++-
T Consensus       108 ~An~av~~all~pgD~im~~~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~v~~~~~~IDyd~l~~~a~~~kPklIi~G  187 (470)
T d1rv3a_         108 PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIAG  187 (470)
T ss_dssp             HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEEC
T ss_pred             cHHHHHHHHhcCCCCeEeeeccccCCcccccccccCCCcccccceeEeeEEEEecccCcccHHHHHHHHHhhCcceEeec
Confidence            677788888999999999877554322110          11112466777754 4468999999999988899999875


Q ss_pred             CCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcc-ccCC---CchhhhhhcCCcEEEEccChhhhccccccceeeecCH-
Q 014594          226 SPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE-FSGL---ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-  299 (422)
Q Consensus       226 ~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~-~~~~---~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~-  299 (422)
                      .-.  .-..++.+++++|++. |.+++.|-+|.. +..+   ++++.    +. .++..|.+|.+  +|-|.|.++.+. 
T Consensus       188 ~S~--y~r~~d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sPl~----~a-Dvvt~tTHKtl--rGPrgGiI~~~~~  258 (470)
T d1rv3a_         188 TSC--YSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE----HC-HVVTTTTHKTL--RGCRAGMIFYRRG  258 (470)
T ss_dssp             CSS--CCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG----TC-SEEEEESSGGG--CCCSCEEEEEECS
T ss_pred             hhh--ccccCCHHHHHHHHhccCCeEEecchhhhhhccccccCChhh----ee-eeeeeehhhhc--cCCcceEEEEccc
Confidence            333  3477899999999997 999999999964 2211   22222    22 38888999986  688899999864 


Q ss_pred             --------------HHHHHHHHhcCCCC---CcHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHHccCCCCccc-
Q 014594          300 --------------SIIEYLWRAKQPYN---VSVAAEVAACAALQ---NPIYLEVKEALIKERERLFKLLKDVPFLNPY-  358 (422)
Q Consensus       300 --------------~~~~~l~~~~~~~~---~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-  358 (422)
                                    ++.+++.+...|..   +..-..++...++.   .+++.+..+++.++.+.|.+.|.+.|+..+. 
T Consensus       259 ~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~~~IAa~Ava~~ea~~~~fk~Ya~qvv~NAk~La~~L~~~G~~v~~g  338 (470)
T d1rv3a_         259 VRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTG  338 (470)
T ss_dssp             BCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGG
T ss_pred             cccccccccchhHHHHHHHHhhhcCccccccchhhHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCceeccC
Confidence                          37777777665532   21112222222222   2356557778889999999999998754443 


Q ss_pred             CCCceEEEEEeCC-CCCHHHHHHHHHhCCcEEE----eCCC-CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014594          359 PSYSNFILCEVTS-GMDAKKLKDDLAKMGVMIR----HYNN-KELKGYVRVSVG-------KPEHTDALMECLMH  420 (422)
Q Consensus       359 p~~~~f~~~~~~~-~~~~~~~~~~L~~~gI~v~----~~~~-~~~~~~iRis~~-------~~~~~~~l~~al~~  420 (422)
                      ..+...+++++.+ +.+..++.+.|.+.||.+.    |++. +..+..|||+..       .+++++++.+.|.+
T Consensus       339 gTdnHlvlvdl~~~g~~g~~ae~~Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT~alTtrG~~e~dm~~iA~~I~~  413 (470)
T d1rv3a_         339 GSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHR  413 (470)
T ss_dssp             SCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             CCCCceEEEeecccCCcHHHHHHHHHHcCcEECCCcCCCCCCCCCCCeeEecCHHHHhCCCCHHHHHHHHHHHHH
Confidence            3344567888853 6788888888999999996    4443 334578999963       35666666665543

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=99.58  E-value=3.7e-14  Score=137.27  Aligned_cols=321  Identities=13%  Similarity=0.115  Sum_probs=194.7

Q ss_pred             CCCCCCeEEcCCC--CCCCC-CCHHHHHHHhc-CCC-CCC--C--CCcchHHHHHHHHHHcCCC-CCCEEEeCCHHHHHH
Q 014594           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF-PYI--Y--PDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (422)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~-~~~--y--~~~~~~~lr~~la~~~~~~-~~~i~~~~G~~~al~  160 (422)
                      +.+++++||+..+  .+.++ .+|++.+++.+ +.. .+.  +  ..+...++-+.+.+.+.-+ .+.+++++++++|.+
T Consensus        36 D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e  115 (425)
T d1sffa_          36 DVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVE  115 (425)
T ss_dssp             ETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHH
T ss_pred             eCCCCEEEEcCcCHHhhcccCCcHHHHHHHHHHHhhcCCcccccccCcHHHHHHHHHHhhhhhcccceeeeeccccchhh
Confidence            4567889999886  44555 67999999986 332 111  1  1223456777777777533 358999999999999


Q ss_pred             HHHHHhc--CCCCEEEEcCCCchhHHHHHHH-cCC-------------EEEEecCCC--CCCC------CHHHHHHH-hh
Q 014594          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKS--DFSL------NVELIADA-VE  215 (422)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~--~~~~------d~~~l~~~-i~  215 (422)
                      .+++...  ....+|+....+|++....+.. .|.             .....+.+.  ....      +.+.+... ..
T Consensus       116 ~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (425)
T d1sffa_         116 NAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAA  195 (425)
T ss_dssp             HHHHHHHHHHTCCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCC
T ss_pred             hHHHHhhhhhcccceEeecCCCcCccccchhhcCCCCcccCCcccccCCccccCCccccccccchhhHHHHHHHHHhccc
Confidence            9998532  2236788888888755444332 221             112222110  0000      01111111 11


Q ss_pred             cCCCeEEEEeCCCCccCcCC-CHHHHHH---HHcC-CCeEEEccCCccccCCCc--hhhhhhcCCcEEEEccChhhhccc
Q 014594          216 REKPKCIFLTSPNNPDGSII-NDEDLLK---ILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLA  288 (422)
Q Consensus       216 ~~~~~~i~l~~p~NPtG~~~-~~e~l~~---i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~~~S~SK~~~~~  288 (422)
                      ..++.+|++.......|... +.+-+++   +|+. |+++|.||++..|...+.  .....+-.++++   +++|.++ .
T Consensus       196 ~~~vaavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gR~g~~~a~~~~gv~PDi~---~~gK~l~-g  271 (425)
T d1sffa_         196 PEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLT---TFAKSIA-G  271 (425)
T ss_dssp             GGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEE---EECGGGG-T
T ss_pred             ccceEEEEecCccCCCCcccCCHHHHHHHHHHHHHcCceEEeccccccCCCcchhhHHHhcCCCccce---ecccccC-C
Confidence            24567888876665567654 5555544   4555 999999999998653332  222233334444   3689998 7


Q ss_pred             cccceeeecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHccC---ChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCc
Q 014594          289 GLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQN---PIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYS  362 (422)
Q Consensus       289 G~r~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~aa~~~L~~---~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~  362 (422)
                      |+.+|.+++++++.+.+....  .+|+.++++.+++.+.|+.   .+..+ ..+.-...++.+.+.+++.+.+......|
T Consensus       272 G~P~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~G  351 (425)
T d1sffa_         272 GFPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLG  351 (425)
T ss_dssp             SSCCEEEEEEHHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEET
T ss_pred             CcceEEEEEcHHHHHhhCCCCCCCCCCcCHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhhHhhCCceEEEEccc
Confidence            899999999999887664332  3478899999999888864   33333 33334444555555556666544344556


Q ss_pred             eEEEEEeCCC-----CC---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHH
Q 014594          363 NFILCEVTSG-----MD---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMEC  417 (422)
Q Consensus       363 ~f~~~~~~~~-----~~---~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~a  417 (422)
                      .+..+.+...     .+   ...+.+.|.++||++.+...  ..+.+|++.+   ++++++++.++
T Consensus       352 l~~~i~f~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~g~--~~n~i~~~PpL~it~~eid~~l~~  415 (425)
T d1sffa_         352 AMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGP--YYNVLRILVPLTIEDAQIRQGLEI  415 (425)
T ss_dssp             TEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEEST--TSCEEEECCCTTCCHHHHHHHHHH
T ss_pred             cEEEEEEeccCccCCccHHHHHHHHHHHHHCCCEEeccCC--CCCEEEEECCCCCCHHHHHHHHHH
Confidence            6666766311     12   35677888899999987542  2478999965   34444443333

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=99.54  E-value=2.3e-14  Score=135.17  Aligned_cols=309  Identities=12%  Similarity=0.002  Sum_probs=184.0

Q ss_pred             EEcCCCCCCCCCCHHHHHHHhcC-C-C----------CCCCCCc--chHHHHHHHHHHcCCCCC-CEEEeCCHHHHHHHH
Q 014594           98 VKIDANENPYGPPPEVREALGQL-K-F----------PYIYPDP--ESRRLRAALAKDSGLESD-HILVGCGADELIDLI  162 (422)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~-~-~----------~~~y~~~--~~~~lr~~la~~~~~~~~-~i~~~~G~~~al~~~  162 (422)
                      .+|+  ..|...|++|++++.+. . +          +|+-+..  -..+.|+.|+++++.+.+ .|++++|++++...+
T Consensus         3 ~nF~--pGP~~~p~~Vl~a~~~~~~~~~~~~~~~~~~sHRs~ef~~l~~~~r~~l~~l~~~~~~~~v~~~~gs~t~~~~a   80 (360)
T d1bjna_           3 FNFS--SGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAA   80 (360)
T ss_dssp             EECC--SSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHH
T ss_pred             EEeC--CCCcCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCchHHHHhh
Confidence            4553  35666789999999873 1 1          1222222  156899999999998644 678888776666555


Q ss_pred             HH-HhcCCCCEEEEcCCCch--hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHHH
Q 014594          163 MR-CVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (422)
Q Consensus       163 ~~-~l~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~  239 (422)
                      .. .+..+++.+++....+.  .+...++..|..++.+..+.+...+.+.+++.+. .+++++++++.+|-||...+.+.
T Consensus        81 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~~~~~~t~~~~~~~~  159 (360)
T d1bjna_          81 VPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQ-LSDNAAYMHYCPNETIDGIAIDE  159 (360)
T ss_dssp             HHHHHCTTCCEEEEEESSHHHHHHHHHHTTTSEEEEEECEEEETTEEEECCGGGCC-CCSSCSCEEECSEETTTTEECCC
T ss_pred             hhhcccccccccceecccchhhhhHHHHhhcCccceeeccccCCCcchhhhhhhhc-cCCceeEEEecccccccCccccc
Confidence            44 45677788877766664  3444555577766666644444455566666665 78888888889999999887654


Q ss_pred             HHHHHcC--CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHH------------HH
Q 014594          240 LLKILEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE------------YL  305 (422)
Q Consensus       240 l~~i~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~------------~l  305 (422)
                      +   .+.  ++++++|.+.+.....-.      ..+-.+.+.|.+|.+++++. .|+++..+...+            ..
T Consensus       160 i---~~~~~~~~v~vDa~~~~~~~~vd------~~~~dv~~~ss~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (360)
T d1bjna_         160 T---PDFGADVVVAADFSSTILSRPID------VSRYGVIYAGAQKNIGPAGL-TIVIVREDLLGKANIACPSILDYSIL  229 (360)
T ss_dssp             C---CCCCTTCCEEEECTTTTTSSCCC------GGGCSEEEEETTTTTSSTTC-EEEEEEGGGCSCCCTTSCGGGCHHHH
T ss_pred             e---ecccccceeeeeeeccccceeee------eccceeEEEEcccccccCCC-ceeEeeehhhhhccccCCcchhhHHH
Confidence            4   333  888999988764332111      11223677778888875553 344443221111            11


Q ss_pred             HHh-cCCCCCcHHH-HHHHHHHc--cCChHHH-HHHHHHHHHHHHHHHHccCCCCcccCC----CceEEEEEeCCCCCHH
Q 014594          306 WRA-KQPYNVSVAA-EVAACAAL--QNPIYLE-VKEALIKERERLFKLLKDVPFLNPYPS----YSNFILCEVTSGMDAK  376 (422)
Q Consensus       306 ~~~-~~~~~~~~~~-~~aa~~~L--~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~----~~~f~~~~~~~~~~~~  376 (422)
                      ... .......... ..+....+  ......+ ..++.++....+...+...+.....+.    ...-+.+.+|++.+.+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rs~~v~~f~~~~~~~~~  309 (360)
T d1bjna_         230 NDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKRNRSRMNVPFQLADSALDK  309 (360)
T ss_dssp             HHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEECCBCGGGBCSSEEEEEESSGGGHH
T ss_pred             HhhhhhccccccchHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhccccccccCCcccccceEEEEEcCCcccHH
Confidence            111 1112222222 11111111  1122333 444555555555555555443222111    1234667888888889


Q ss_pred             HHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          377 KLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       377 ~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      ++.+.|.++||.++.|...  -+.||||+.   +.+++++|.++|+.+
T Consensus       310 ~~~~~l~~~Gi~~~~G~~~--~g~~Ris~~~~~t~edV~~li~~l~e~  355 (360)
T d1bjna_         310 LFLEESFAAGLHALKGHRV--VGGMRASIYNAMPLEGVKALTDFMVEF  355 (360)
T ss_dssp             HHHHHHHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCEeecCCCc--cCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            9999999999998876421  235999974   567888888888865

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=99.54  E-value=8.8e-14  Score=136.43  Aligned_cols=318  Identities=12%  Similarity=0.082  Sum_probs=188.9

Q ss_pred             CeEEcCCCCCCCCCCHHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE--
Q 014594           96 DIVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK--  172 (422)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~~~gd~--  172 (422)
                      .+|||-+....-...+.+..++...  ...| .++...+|++++++++|.  +.+++++++++|+..++++++++||.  
T Consensus        42 ~~idl~sd~~t~~~~~~~~a~~~~g--d~~Y~~~~~~~~le~~~a~l~G~--~~~~~~~sGt~A~~~a~~~~~~~g~~~~  117 (467)
T d2v1pa1          42 VFIDLLTDSGTGAVTQSMQAAMMRG--DEAFSGSRSYYALAESVKNIFGY--QYTIPTHQGRGAEQIYIPVLIKKREQEK  117 (467)
T ss_dssp             CSEECSCCTTCSCCCHHHHHHTTSC--CCCSSSCHHHHHHHHHHHHHTCC--SEEEEECSSTTTHHHHHHHHHHHHHHHH
T ss_pred             eeeeccccccchhhHHHHHhhcccc--chhhcCCchHHHHHHHHHHHHCC--CEEEECCCCHHHHHHHHHHHhhccceEe
Confidence            4678765433333334443333221  1456 456788999999999996  47899999999999999988766543  


Q ss_pred             -------EEEcCCCchhHHHHHHHcCCEEEEecCCC----------CCCCCHHHHHHHhhc---CCCeEEEEeCCCCcc-
Q 014594          173 -------IVDCPPTFTMYEFDAAVNGAAVVKVPRKS----------DFSLNVELIADAVER---EKPKCIFLTSPNNPD-  231 (422)
Q Consensus       173 -------Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~----------~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPt-  231 (422)
                             ++.....|......+...|+.++.++.+.          ...+|++++++.+.+   ..++++++.+.+|.. 
T Consensus       118 ~~~~~~~i~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~i~~e~~~~~~g  197 (467)
T d2v1pa1         118 GLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAG  197 (467)
T ss_dssp             CCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGG
T ss_pred             cCCCCcEEEEecccccccHHHHHHcCCeeeecccccccccccccccccCCCHHHHHHHHhhcCccccceeeecceeeccc
Confidence                   44555556666677778999999887432          346899999998864   346788888777754 


Q ss_pred             CcCCCHHHHHHHHc---C-CCeEEEccCCcccc----------CCC-ch---hhhhhcCCcEEEEccChhhhccccccce
Q 014594          232 GSIINDEDLLKILE---M-PILVVLDEAYTEFS----------GLE-SR---MEWVKKHDNLIVLRTFSKRAGLAGLRVG  293 (422)
Q Consensus       232 G~~~~~e~l~~i~~---~-~~~li~Deay~~~~----------~~~-~~---~~~~~~~~~~i~~~S~SK~~~~~G~r~G  293 (422)
                      |.+++.+.+++|.+   . |+++|+|+++....          +.+ +.   ...... ...++..|.+|.++  |...|
T Consensus       198 g~~~~~~~l~~i~~ia~~~g~~l~~D~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~d~~s~s~~K~~~--~~~gg  274 (467)
T d2v1pa1         198 GQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYK-YADMLAMSAKKDAM--VPMGG  274 (467)
T ss_dssp             CBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGG-GCSEEEEESSSTTC--CSSCE
T ss_pred             cccCCHHHHHHHHHHHHHcCCEEEEechhhhccccccccccccccCCcccccchhhcc-cCCEEEecCCCCCC--CCCce
Confidence            67778777765544   4 99999999985311          111 11   111111 12355567788765  34467


Q ss_pred             eeecCHHHHHHHHH----h---cC----CCCCcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcccCCCc
Q 014594          294 YGAFPLSIIEYLWR----A---KQ----PYNVSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNPYPSYS  362 (422)
Q Consensus       294 ~i~~~~~~~~~l~~----~---~~----~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~  362 (422)
                      +++.+.+.+....+    .   ..    ..+.......++...+......+..++..++.+++.+.|++.+.. +.+..+
T Consensus       275 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-v~~~~~  353 (467)
T d2v1pa1         275 LLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIGVV-CQQAGG  353 (467)
T ss_dssp             EEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTTCC-EEEECS
T ss_pred             eEEecchhhhhHHHhhcccccccccCcchhhhHHHHHHHHHHHhHHhhhHHHHHHHHHHHHHHHHHHHhcCCc-ccCCCc
Confidence            77776543322211    1   11    123444444444443332211224444567788888888887643 333333


Q ss_pred             eEEEEEe----CC----CCCHHHHHHH-HHhCCcEEEeCCC-------------CCCCCeEEEEec----ChhhHHHHHH
Q 014594          363 NFILCEV----TS----GMDAKKLKDD-LAKMGVMIRHYNN-------------KELKGYVRVSVG----KPEHTDALME  416 (422)
Q Consensus       363 ~f~~~~~----~~----~~~~~~~~~~-L~~~gI~v~~~~~-------------~~~~~~iRis~~----~~~~~~~l~~  416 (422)
                      ..+.+..    +.    ......+... +.+.||.......             +.....+|+++.    +.+++|.+.+
T Consensus       354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gi~~~~~g~~~~~~~~~~~~~~~~~~~~vRlaip~~~~T~eeiD~vv~  433 (467)
T d2v1pa1         354 HAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIE  433 (467)
T ss_dssp             SCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTCCHHHHHHHHH
T ss_pred             cceeecchhhcCCcchhhhhhHHHHHHHHHHcCCeeecccccccccccccCCccCCCcceEEEecCCCCCCHHHHHHHHH
Confidence            3333321    21    1223344444 4588886542211             234568999875    4567787878


Q ss_pred             HHhhh
Q 014594          417 CLMHL  421 (422)
Q Consensus       417 al~~l  421 (422)
                      +|+++
T Consensus       434 ~l~~v  438 (467)
T d2v1pa1         434 AFKHV  438 (467)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77764

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.49  E-value=8.3e-13  Score=128.95  Aligned_cols=286  Identities=10%  Similarity=0.008  Sum_probs=184.0

Q ss_pred             HHHHHHHHHcCCCC---------CCEEEeCCHHHHHHHHHHHhcC----------CC---------CEEEEcCCCchhHH
Q 014594          133 RLRAALAKDSGLES---------DHILVGCGADELIDLIMRCVLD----------PG---------DKIVDCPPTFTMYE  184 (422)
Q Consensus       133 ~lr~~la~~~~~~~---------~~i~~~~G~~~al~~~~~~l~~----------~g---------d~Vl~~~p~y~~~~  184 (422)
                      ++-+++++.+|.+.         ..-++|+|+++++..++.+-.+          +|         -.|+++.-+|....
T Consensus       117 ~v~~wl~~l~g~p~~~~~~~~~~~~G~~~~Ggs~anl~al~~AR~~~~~~~~~~~~g~~~~~~~~~~vv~~s~~~H~Si~  196 (476)
T d1js3a_         117 VMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVE  196 (476)
T ss_dssp             HHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHH
T ss_pred             HHHHHHHHHhCCCcccccCCCCCCCceECCcHHHHHHHHHHHHHHHHHHhhcccccCcccccccCceEEEecccccHHHH
Confidence            45556666677642         2468899999888777753211          11         14778888999999


Q ss_pred             HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-----CCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCcc
Q 014594          185 FDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE  258 (422)
Q Consensus       185 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~  258 (422)
                      ..+...|..++.+|.++++.+|+++|++.+++.     .+-+|+.+..++.||.+-|.+++.+|++. ++|+++|.+|..
T Consensus       197 ka~~~lGl~~~~v~~d~~~~md~~~L~~~i~~~~~~g~~p~~VvataGtt~~G~iDpl~~I~~i~~~~~~wlHVDAA~Gg  276 (476)
T d1js3a_         197 RAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAG  276 (476)
T ss_dssp             HHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGG
T ss_pred             HHHHhcCceEEEeccCCCCCcCHHHHHHHHHHHHhcCCCcEEEeecCCCccceeeccHHHHHHHHHhcCcEEEEecccch
Confidence            999999999999999889999999999999642     24466667889999999999999999997 999999999987


Q ss_pred             ccC-CCchhhhhh-cCCcEEEEccChhhhccccccceeeecCH-HHHHHHHH--------hc---C-C-----CC-----
Q 014594          259 FSG-LESRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWR--------AK---Q-P-----YN-----  313 (422)
Q Consensus       259 ~~~-~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~r~G~i~~~~-~~~~~l~~--------~~---~-~-----~~-----  313 (422)
                      +.. .......+. ....+-+..+++|.++.| ...|.++.+. ........        ..   . .     ++     
T Consensus       277 ~~~~~~~~~~~~~gi~~aDSit~d~HK~l~~P-~~~g~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sr  355 (476)
T d1js3a_         277 SAFICPEFRHLLNGVEFADSFNFNPHKWLLVN-FDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGR  355 (476)
T ss_dssp             GGGGSTTTGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCC
T ss_pred             hhhhhcchhhhhcCCcccceeeecCccccccC-CcceeecccchHHHHHHHhcChhhhccccccccccccccccccccch
Confidence            542 111111111 111224555789976544 4677777653 32221110        00   0 0     11     


Q ss_pred             -CcHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCc-ccCCCceEEEEEeCCCC-CHHHHHHHHHhCC-cEE
Q 014594          314 -VSVAAEVAACAALQNPIYLEVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGM-DAKKLKDDLAKMG-VMI  389 (422)
Q Consensus       314 -~~~~~~~aa~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~~-~~~~~~~~L~~~g-I~v  389 (422)
                       ...+...++...+....+.++.++..+..+++.+.|++.+.+. +.|..-+.+.+++.+.. -.+++.+.|.+.| +.+
T Consensus       356 ~~~al~lw~~l~~~G~~g~~~~i~~~~~lA~~l~~~l~~~~~fel~~~p~l~iV~Fr~~~~d~~n~~l~~~l~~~G~~~~  435 (476)
T d1js3a_         356 RFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLKGSDGLNEALLERINSARKIHL  435 (476)
T ss_dssp             CCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCCCSSEEEEEESSCHHHHHHHHHHHHHHTSCBC
T ss_pred             hhHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcCCCeEEECCCceEEEEEEccCChHHHHHHHHHHHhcCCEEE
Confidence             1123334444444334444477778889999999999987665 45667777888875321 1246777777666 444


Q ss_pred             EeCCCCCCCCeEEEEecC----hhhHHHHHHHHhh
Q 014594          390 RHYNNKELKGYVRVSVGK----PEHTDALMECLMH  420 (422)
Q Consensus       390 ~~~~~~~~~~~iRis~~~----~~~~~~l~~al~~  420 (422)
                      .+... .+..++|++++.    .++++.+.+.|++
T Consensus       436 s~t~~-~g~~~lR~~i~n~~Tt~~did~~~~~i~~  469 (476)
T d1js3a_         436 VPCRL-RGQFVLRFAICSRKVESGHVRLAWEHIRG  469 (476)
T ss_dssp             EEEEE-TTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             eeeeE-CCEEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence            43221 223589999863    3345555555554

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.43  E-value=2.1e-12  Score=125.82  Aligned_cols=316  Identities=13%  Similarity=0.107  Sum_probs=178.7

Q ss_pred             CCCCCCeEEcCCC--CCCCC-CCHHHHHHHhcC-C-----CCCCCCCcchHHHHHHHHH----HcCCCCCCEEEeCCHHH
Q 014594           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQL-K-----FPYIYPDPESRRLRAALAK----DSGLESDHILVGCGADE  157 (422)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~~-~-----~~~~y~~~~~~~lr~~la~----~~~~~~~~i~~~~G~~~  157 (422)
                      ..+++.+||+.++  .+.++ .+|+|.+++.+. .     ....+.......+.+.+++    ..+-..+.+++++++++
T Consensus        49 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~~a~~lae~l~~~~~~~~~~v~f~~sGse  128 (461)
T d1ohwa_          49 DVDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVAPKGMSQLITMACGSC  128 (461)
T ss_dssp             BTTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGGGCCTTCCEEEEESSHHH
T ss_pred             ECCCCEEEEcccCHHHHhhcCCcHHHHHHHHHHHhhhhhcccccccccchHHHHHHHHHHHHhhhccCcceeeeecchhh
Confidence            3567889998765  33343 578999998762 1     1111222222233444444    44445568999999999


Q ss_pred             HHHHHHHHhc----------------------------CCCCEEEEcCCCchhHHHHHHH-cCC-------------EEE
Q 014594          158 LIDLIMRCVL----------------------------DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVV  195 (422)
Q Consensus       158 al~~~~~~l~----------------------------~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~  195 (422)
                      |++.+++...                            .+...|+....+|++....+.. .|-             ...
T Consensus       129 Ave~Aik~Ar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~~~~syHG~t~~a~s~tg~~~~~~~~~~~~~~~~~  208 (461)
T d1ohwa_         129 SNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIA  208 (461)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHTCCSCHHHHTTCCCCCCCEE
T ss_pred             hhHHHHHHHHHHhhhcccCcccccchhhhhhhhccccCCCCceEEEecCCcCCCCcccccccCCcccccccccccCCccc
Confidence            9999988431                            2235789899988754433332 221             111


Q ss_pred             EecC-CCCC-----------CCCHHHHHHHhh-----cCCCeEEEEeCCCCccCcCC-CHHH---HHHHHcC-CCeEEEc
Q 014594          196 KVPR-KSDF-----------SLNVELIADAVE-----REKPKCIFLTSPNNPDGSII-NDED---LLKILEM-PILVVLD  253 (422)
Q Consensus       196 ~v~~-~~~~-----------~~d~~~l~~~i~-----~~~~~~i~l~~p~NPtG~~~-~~e~---l~~i~~~-~~~li~D  253 (422)
                      ..+. ....           ..+.+.+++.+.     ..++.+|++...+...|... +.+-   ++++|+. |+++|.|
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPi~g~~G~~~~~~~fl~~lr~lc~~~gillI~D  288 (461)
T d1ohwa_         209 PFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVD  288 (461)
T ss_dssp             CCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred             ccccccccccccccccchhhhhhHHHHHHHHHHHHhCCCccceeeeccccccccccCchhhHHHHHHHHHHhhCcceecc
Confidence            1110 0000           012345555442     24677888887776677665 4444   4445555 9999999


Q ss_pred             cCCccccCCCchhh--hhhc--CCcEEEEccChhhhccccccceeeecCHHHHHH-HHHhcCCCCCcHHHHHHHHHHccC
Q 014594          254 EAYTEFSGLESRME--WVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY-LWRAKQPYNVSVAAEVAACAALQN  328 (422)
Q Consensus       254 eay~~~~~~~~~~~--~~~~--~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~~-l~~~~~~~~~~~~~~~aa~~~L~~  328 (422)
                      |++..|...+....  ..+.  .+.++   +++|.++ .    |+......+... .......|+.++++.+++.+.|+-
T Consensus       289 EV~tG~gRtG~~~~~e~~gi~~~PDiv---~~gK~l~-~----g~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~  360 (461)
T d1ohwa_         289 EVQTGGGSTGKFWAHEHWGLDDPADVM---TFSKKMM-T----GGFFHKEEFRPNAPYRIFNTWLGDPSKNLLLAEVINI  360 (461)
T ss_dssp             CTTTCSSTTSSSSGGGGGCCSSCCSEE---EECGGGS-S----EEEEECGGGSCSSTTSSCCSCSSCHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccCchhh---hhhhccc-c----cccccccccccccccccccccccccccchhhcccchh
Confidence            99998875443222  1111  23334   4679775 2    333333222110 011223477888888888888753


Q ss_pred             ChHHHHHHHHHHHHHHHHHHHcc----CC-CCcccCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEE
Q 014594          329 PIYLEVKEALIKERERLFKLLKD----VP-FLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRV  403 (422)
Q Consensus       329 ~~~~~~~~~~~~~~~~l~~~L~~----~~-~~~~~p~~~~f~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRi  403 (422)
                      -+-.+..++.++..+++.+.|++    .+ .+.-....|.++-+++++.....++.+.+.++|+++.+..    ++.|||
T Consensus       361 i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~i~~~~~~~Gll~~~~~----~~~ir~  436 (461)
T d1ohwa_         361 IKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTFCSFDTPDESIRNKLISIARNKGVMLGGCG----DKSIRF  436 (461)
T ss_dssp             HHHTTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETTEEEEECSSHHHHHHHHHHHHHTTEECEEET----TTEEEC
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEeeeeeEEEEEEcCCHHHHHHHHHHHHHCCeEEeeCC----CCEEEE
Confidence            11001344444445555555543    43 2222345677888998754456688899999999998864    478999


Q ss_pred             Eec---ChhhHHHHHHHH
Q 014594          404 SVG---KPEHTDALMECL  418 (422)
Q Consensus       404 s~~---~~~~~~~l~~al  418 (422)
                      ...   +.++.+++.+++
T Consensus       437 ~PpL~it~~eid~~~~~l  454 (461)
T d1ohwa_         437 RPTLVFRDHHAHLFLNIF  454 (461)
T ss_dssp             CCCTTCCHHHHHHHHHHH
T ss_pred             eCCcCCCHHHHHHHHHHH
Confidence            865   344444444443

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=99.42  E-value=7.2e-13  Score=125.04  Aligned_cols=309  Identities=10%  Similarity=-0.016  Sum_probs=176.6

Q ss_pred             eEEcCCCCCCCCCCHHHHHHHhcCCC------------CCCCCCc--chHHHHHHHHHHcCCCCC-CEEEeCCHHHHHHH
Q 014594           97 IVKIDANENPYGPPPEVREALGQLKF------------PYIYPDP--ESRRLRAALAKDSGLESD-HILVGCGADELIDL  161 (422)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~~~------------~~~y~~~--~~~~lr~~la~~~~~~~~-~i~~~~G~~~al~~  161 (422)
                      +.+|+.  .|...|++|++++.+...            +|+-++.  -..+.|+.|+++++.+.+ .|++++|++++...
T Consensus         4 ~~nF~p--GP~~~p~~V~~a~~~~~~~~~~~~~~~~~~sHRs~~~~~~~~~~r~~l~~l~~~~~~~~i~~~~gt~~~~~~   81 (360)
T d1w23a_           4 VFNFNA--GPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFT   81 (360)
T ss_dssp             CEECCS--SSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHH
T ss_pred             eeEeCC--CCcCCCHHHHHHHHHHHHhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence            345555  455567999999987321            1222222  146799999999998655 68888888877765


Q ss_pred             HHHH-hcCCCCEEEEcCCCch--hHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCHH
Q 014594          162 IMRC-VLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (422)
Q Consensus       162 ~~~~-l~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e  238 (422)
                      +... +..+++.|++....+.  .+...++..+...+....++....+++.++....  ..+.   .+.+|.||.+.+.+
T Consensus        82 ~~~~~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~tg~~~~~~  156 (360)
T d1w23a_          82 MLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAASTKANSYQSIPDFSEFQL--NEND---AYLHITSNNTIYGT  156 (360)
T ss_dssp             HHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEEECGGGTSCSCCCGGGCCC--CTTE---EEEEEESEETTTTE
T ss_pred             HHHhhhcccCcccceeeccchhhhhHHHHHHhhhcceeeccccccccchhhhhhccc--cccc---ceeEecCCccccce
Confidence            5554 4567788877665553  4445556677666666543333344444444433  2233   34556799999999


Q ss_pred             HHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhccccccceeeecCHHHHH------------HH
Q 014594          239 DLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE------------YL  305 (422)
Q Consensus       239 ~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r~G~i~~~~~~~~------------~l  305 (422)
                      ++.++++. |+++|+|.+.+.....-.    +...+  +.+.+++|..+++| ..|+++..+...+            ..
T Consensus       157 ~i~~~~~~~g~l~ivDavqs~g~~~id----~~~~~--vd~~~~~~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (360)
T d1w23a_         157 QYQNFPEINHAPLIADMSSDILSRPLK----VNQFG--MIYAGAQKNLGPSG-VTVVIVKKDLLNTKVEQVPTMLQYATH  229 (360)
T ss_dssp             ECSSCCCCCSSCEEEECTTTTTSSCCC----GGGCS--EEEEETTTTTSCTT-CEEEEEEHHHHCSCCTTCCGGGCHHHH
T ss_pred             eeeeccccceeeEEeeccccccccccc----ccccc--ceEEeeccccccCC-cceeeEechhhhcccccCCcchhhhhh
Confidence            99999987 999999999985443211    22333  44456667666555 2444443322211            11


Q ss_pred             HHh-cCCCCCcHHHHHH----HHHHccCChHHHHHHHHHHHHHHHHHHHccCCCCcc---cC-C-CceEEEEEeCCCCCH
Q 014594          306 WRA-KQPYNVSVAAEVA----ACAALQNPIYLEVKEALIKERERLFKLLKDVPFLNP---YP-S-YSNFILCEVTSGMDA  375 (422)
Q Consensus       306 ~~~-~~~~~~~~~~~~a----a~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~---~p-~-~~~f~~~~~~~~~~~  375 (422)
                      ... ............+    ....++........++.+..................   .+ . ...-+.+.++++.+.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~vvsf~i~~~~~~  309 (360)
T d1w23a_         230 IKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNEELN  309 (360)
T ss_dssp             HHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSHHHH
T ss_pred             hhhhhhcccccceeeechhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhcccccccCCChhhcceeEEEEEcCCCccH
Confidence            111 1112222222111    122222222222333344444444444433222221   11 1 122466788766677


Q ss_pred             HHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          376 KKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       376 ~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      +++.+.|.++||.++.|...  -+.+|||+-   +.+++++|.++++.+
T Consensus       310 ~~~~~~l~~~GI~~~~G~~~--~ggiRiS~~~~~t~e~V~~Li~~~~~~  356 (360)
T d1w23a_         310 QQFLAKAKEQGFVGLNGHRS--VGGCRASIYNAVPIDACIALRELMIQF  356 (360)
T ss_dssp             HHHHHHHHHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCeeeeCCCc--cCcEEEEeeCCCCHHHHHHHHHHHHHH
Confidence            89999999999998876432  235999963   567888888888765

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=99.14  E-value=4.1e-09  Score=100.28  Aligned_cols=275  Identities=17%  Similarity=0.161  Sum_probs=176.5

Q ss_pred             HHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCchhHH----HHHHHcCCEEEEecCCCCCCCCH
Q 014594          133 RLRAALAKDSGLESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSDFSLNV  207 (422)
Q Consensus       133 ~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~  207 (422)
                      ++.+.|++..|.+.-+.-.-.|++...+.++.+.. ...+++++..-.++.+.    ..++..|.+++.++.+++ ..+.
T Consensus       112 e~q~~l~eltGmd~~n~s~~~ga~a~~~~~~~~~~~~~~~~~~v~~~~~p~~~~v~~t~a~~~g~~vv~v~~~~~-~~~~  190 (437)
T d1wyua1         112 EYQTMIAELAGLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGG-RTPL  190 (437)
T ss_dssp             HHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCBTT-BCCC
T ss_pred             HHHHHHHHhhCCCccccCchHHHHHHHHHHHHHHhhhcccccccccccChHHhhhhhhhcccceeeEEeeecccc-cchh
Confidence            78888999999877777788888888877766542 24577888888886443    345668999999996544 2222


Q ss_pred             HHHHHHhhcCCCeEEEEeCCCCccCcCCCHHHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhc
Q 014594          208 ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG  286 (422)
Q Consensus       208 ~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~  286 (422)
                      ++    +. +++.+|++.+||. .|.+-+.+++.++++. |.+++.|..-..+..    +....+.+.+|++++ +|.||
T Consensus       191 ~~----~~-~~~Aavmi~~Pnt-~G~~ed~~~i~~~~h~~G~l~~~~ad~~al~~----l~~Pg~~GaDi~~g~-~q~fg  259 (437)
T d1wyua1         191 PE----VG-EEVGAVVVQNPNF-LGALEDLGPFAEAAHGAGALFVAVADPLSLGV----LKPPGAYGADIAVGD-GQSLG  259 (437)
T ss_dssp             CC----CC-TTEEEEEEESSCT-TSBCCCHHHHHHHHHHTTCEEEEECCTTGGGT----BCCHHHHTCSEEEEE-CTTTT
T ss_pred             hh----hc-cceeEEEEccccc-cccccchHHHHHHhhhccceEEeeechhhhhc----cccccccccceEeec-cceec
Confidence            22    33 6889999999966 8999888888888877 777666643221211    111122344466666 44443


Q ss_pred             c----ccccceeeecCHHHHHHHH----------------------------HhcCC---CCCcHHHHHHHHHHcc--CC
Q 014594          287 L----AGLRVGYGAFPLSIIEYLW----------------------------RAKQP---YNVSVAAEVAACAALQ--NP  329 (422)
Q Consensus       287 ~----~G~r~G~i~~~~~~~~~l~----------------------------~~~~~---~~~~~~~~~aa~~~L~--~~  329 (422)
                      .    +|-..|++.+.+++.+.+.                            +.+..   .+.+.+....+..++.  .+
T Consensus       260 ~p~g~GGP~~G~~a~~~~l~r~lPgrivg~s~d~~G~~~~~l~lqtreqhIrRekatsnict~q~l~a~~a~~Y~~~lG~  339 (437)
T d1wyua1         260 LPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGP  339 (437)
T ss_dssp             CCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHH
T ss_pred             cccCCCcCccccccccchhhccccccccccccccCCcccceeecccccccccccccccchhhHHHHHHHHHHHHhhhcCc
Confidence            2    2333688888777665432                            11111   2223333322333322  23


Q ss_pred             hHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceE--EEEEeCCCCCHHHHHHHHHhCCcEEEeC-CCCCCCCeEEEEe
Q 014594          330 IYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNF--ILCEVTSGMDAKKLKDDLAKMGVMIRHY-NNKELKGYVRVSV  405 (422)
Q Consensus       330 ~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f--~~~~~~~~~~~~~~~~~L~~~gI~v~~~-~~~~~~~~iRis~  405 (422)
                      +.++ +.++...+..++.+.|.+++++.+......|  +.+++  +.+..++.++|.++|+....- .....++.+.|++
T Consensus       340 ~GL~~ia~~a~~~A~yl~~~L~~~~g~~~~~~~~~f~ef~v~~--~~~~~~i~k~L~d~G~~~~~~~~~~~~~~~lli~~  417 (437)
T d1wyua1         340 EGLREVALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEFALAL--PKDPEAVRRALAERGFHGATPVPREYGENLALFAA  417 (437)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSSBCSEEEEEC--SSCHHHHHHHHHHTTCCCCEECCTTSCSSEEEEEC
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhcCCeeccCCCCeeeEEEEEC--CCCHHHHHHHHHhCCCCCCcccccCCCCCeEEEec
Confidence            5566 8888889999999999998766644334333  34555  468899999999999864321 1122357899998


Q ss_pred             c---ChhhHHHHHHHHhhh
Q 014594          406 G---KPEHTDALMECLMHL  421 (422)
Q Consensus       406 ~---~~~~~~~l~~al~~l  421 (422)
                      .   +.+++|+|.++++++
T Consensus       418 TE~~tkeeiD~~v~al~ei  436 (437)
T d1wyua1         418 TELHEEEDLLALREALKEV  436 (437)
T ss_dssp             CTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHh
Confidence            6   456778888887764

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=99.11  E-value=2.1e-08  Score=96.53  Aligned_cols=320  Identities=17%  Similarity=0.131  Sum_probs=197.8

Q ss_pred             CCeEEcCCCCCCCCCCHHHHHHHhcC-CCCCCC-C-C--cc----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 014594           95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIY-P-D--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (422)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~y-~-~--~~----~~~lr~~la~~~~~~~~~i~~~~G~~~al~~~~~~  165 (422)
                      ..++-++.+...+  .|.+.+.+... ..-+-| | .  .|    .-+++..|+++.|.+..|.-+-.|++.+-+.++.+
T Consensus        65 ~~~~~lG~~~~hy--~P~v~~~~~~~~TaYTPYQPaEiSQG~LQalfEfQtmi~eLTGMdvaNaS~yDGatA~aeA~~ma  142 (471)
T d1wyub1          65 TTFYPLGSCTMKY--NPKLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYLKALTGMDAITLEPAAGAHGELTGILII  142 (471)
T ss_dssp             TSCCCBTTTCCCC--CCHHHHHHHHTTSSCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHH
T ss_pred             ccccCCccccCcc--CcchhhhHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHHHHH
Confidence            3456666654444  35566666542 211345 3 2  13    23788999999998766666677887766655554


Q ss_pred             h---cCCC----CEEEEcCCCc-hhHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCeEEEEeCCCCccCcCCCH
Q 014594          166 V---LDPG----DKIVDCPPTF-TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (422)
Q Consensus       166 l---~~~g----d~Vl~~~p~y-~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (422)
                      .   .+.+    ..+++..+.+ ..........+..++.++.+.....|.+.+..... .++.++++.+|++.-+..-..
T Consensus       143 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~a~v~v~~p~~~g~~e~~~  221 (471)
T d1wyub1         143 RAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEVDLEALKRELG-PHVAALMLTNPNTLGLFERRI  221 (471)
T ss_dssp             HHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCTTSSBCHHHHHHHCS-TTEEEEEECSSCTTSCCCTTH
T ss_pred             HHHhhhcccccccccccCCcccccceeeeeecccceeecccccccccccchhhhhhhh-ccccceeeccCCCcccccchh
Confidence            3   1122    2344444444 45555566688899999877777889999998876 678899999999877666678


Q ss_pred             HHHHHHHcC-CCeEEEccCCccccCCCchhhhhhcCCcEEEEccChhhhcc----ccccceeeecCHHHHHHHHHh----
Q 014594          238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL----AGLRVGYGAFPLSIIEYLWRA----  308 (422)
Q Consensus       238 e~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~----~G~r~G~i~~~~~~~~~l~~~----  308 (422)
                      +++.++++. +..+++|-+-...........  ..... +++.+..+.+|.    +|-.+|++.+.+++.+++--.    
T Consensus       222 ~~~~~~~h~~g~~~~~~~~~~~~~~~l~~p~--~~g~d-iv~vg~~q~~G~P~~~GGP~~G~~a~~~~~~R~~PGRiV~~  298 (471)
T d1wyub1         222 LEISRLCKEAGVQLYYDGANLNAIMGWARPG--DMGFD-VVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVER  298 (471)
T ss_dssp             HHHHHHHHHHTCEEEEEGGGGGGTTTTCCHH--HHTCS-EEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEE
T ss_pred             hhhHHHHHhccccccccccchhhhhhccccC--ccccc-ccccccccccccccccccccccceeehhhhhccCCCceecC
Confidence            888888876 777777655432221111111  12223 444445565543    345588999998887765310    


Q ss_pred             -----------cC------CCCCcHHHHHHHHHHcc--CChHHH-HHHHHHHHHHHHHHHHccCCCCcccCCCceE--EE
Q 014594          309 -----------KQ------PYNVSVAAEVAACAALQ--NPIYLE-VKEALIKERERLFKLLKDVPFLNPYPSYSNF--IL  366 (422)
Q Consensus       309 -----------~~------~~~~~~~~~~aa~~~L~--~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~f--~~  366 (422)
                                 .+      ..+.+.+...++..++.  .++.+. +.+...++..++.+.|+..+ ..+...+.+|  +.
T Consensus       299 ~~~~~~~~~~REqhIrRe~actnqaL~al~A~vYlsllG~~GL~elA~~~~~~A~Yla~~L~~~G-~~~~~~~~ff~EFv  377 (471)
T d1wyub1         299 GEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKG-YRVPYDGPSMHEFV  377 (471)
T ss_dssp             CSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CBCSSCSSCCSCEE
T ss_pred             CCccccccCCCcccccchhhhhhhHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHhhcC-ceeccCcceeeEEe
Confidence                       00      12223333333333332  244555 88888899999999998755 4433333332  44


Q ss_pred             EEeCCCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014594          367 CEVTSGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVG---KPEHTDALMECLMHL  421 (422)
Q Consensus       367 ~~~~~~~~~~~~~~~L~~~gI~v~~~~~~-~~~~~iRis~~---~~~~~~~l~~al~~l  421 (422)
                      ++++.+.+..++.+.|.++|+.--....+ ..++.+-|++.   +.+++|.|.++|+++
T Consensus       378 v~~~~~~~~~~i~k~L~~~G~~~~~~~~p~~~~~~llv~vTE~~tkedID~lv~aL~~i  436 (471)
T d1wyub1         378 AQPPEGFRALDLAKGLLELGFHPPTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGAL  436 (471)
T ss_dssp             EBCSTTCCHHHHHHHHHHTTCCCCEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred             ecCCCCCCHHHHHHHHHHcCCCCCcccCcCCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Confidence            67777788999999999999854222222 24678889885   567788898888765