Citrus Sinensis ID: 014597

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420--
MLGAICFGSHANAYNALLCLPVTTLLWCLLVFGASIVQDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAGQSPNPLPTTEQQSTSNGQAAAPPSTAKTAPSKSIAASAQQLDSVLRVACSLLVLMCLLLSSD
ccEEEEEcccccEEcEEEEcccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccEEEEEEEEEEEEEcccccccccccccccEEEEccccccccccccccccEEEEcccccccHHHHHHHcccccccEEEEcccccccEEEEccccccccccEEEEEcccccccEEEEEEEEEEccEEEccccccEEEEcccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEcccEEEEEcccEEEEEEcccccEEEEEEEEccccEEEEcccccEEEEEEEEccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccc
cEEEEEEcccccEEEEEEEcccccEEEEccccccccccccccccccccccccccccccccHHccccccccccccccEEEEEEEcccccccEEEEEEEEEEcccccccccccEEccEEEEEcccccccHHcccccccEEccccccccHHHHHHHccccccEEEEEEccccccEEEEcccccccccccccEcccccccEEEEEEEEEEEccEEEcccccEEEEEcccEEEEccHHHHHHHHHHHHHHHHccccccccccccEEEEEcccccccccEEEEEEEccEEEEcccccEEEEEccccEEEEEEcccccccEEEEEcEEEccEEEEEEccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccc
mlgaicfgshanaYNALLCLPVTTLLWCLLVFGasivqdrnlseydpssssssknvscshplcksrssckslkdpcpyiadystedtsssgylvddILHLAsfskhapqssvqssviigcgrkqtgsyldgaapdgvmglglgdvsvPSLLAKAGliqnsfsicfdendsgsvffgdqgpatqqstsflpigekydAYFVGVESYcignscltqsGFQALvdsgasftflptEIYAEVVVKFDKLVSSkrislqgnsWKYCYNasseemlkvpdmrlifsknqsfvvrnhifsfpenegfTVFCLTVMstdgdygiigqnfmmghrivfdrenlklawshskceevidkshvhlvpppagqspnplptteqqstsngqaaappstaktapsksiAASAQQLDSVLRVACSLLVLMCLLLSSD
MLGAICFGSHANAYNALLCLPVTTLLWCLLVFGASIVQDRNLSEydpssssssknvscshplcksrssckslkdPCPYIADYSTEDTSSSGYLVDDILHLASFSkhapqssvQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSskrislqgnswKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAGQSPNPLPTTEQQSTSNGQAAAPPSTAKTAPSKSIAASAQQLDSVLRVACSLLVLMCLLLSSD
MLGAICFGSHANAYNALLCLPVTTLLWCLLVFGASIVQDRNLseydpssssssknvscsHPlcksrssckslkDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAGQSPNPLPTTEQQSTSNGQaaappstaktapsksIAASAQQLDSVLRVAcsllvlmclllssD
**GAICFGSHANAYNALLCLPVTTLLWCLLVFGASIVQ*************************************CPYIADYS******SGYLVDDILHLASFS*********SSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQ******STSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVH***********************************************LDSVLRVACSLLVLMCLLL***
MLGAICFGSHANAYNALLCLPVTTLLWCLLVFGASIVQDRNLSEYDPSSSSSSKNVSCS*****************PYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSS*****QGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKC***********************************************************SVLRVACSLLVLMCLLLSSD
MLGAICFGSHANAYNALLCLPVTTLLWCLLVFGASIVQDRNL**************************CKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSK*********SVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAG*************************************AQQLDSVLRVACSLLVLMCLLLSSD
MLGAICFGSHANAYNALLCLPVTTLLWCLLVFGASIVQDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEV*************************************************ASAQQLDSVLRVACSLLVLMCLLLSS*
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLGAICFGSHANAYNALLCLPVTTLLWCLLVFGASIVQDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAGQSPNPLPTTEQQSTSNGQAAAPPSTAKTAPSKSIAASAQQLDSVLRVACSLLVLMCLLLSSD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query422 2.2.26 [Sep-21-2011]
Q9LX20528 Aspartic proteinase-like yes no 0.841 0.672 0.505 1e-100
Q9S9K4475 Aspartic proteinase-like no no 0.713 0.633 0.256 2e-16
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.663 0.56 0.265 1e-09
Q0IU52410 Aspartic proteinase Asp1 no no 0.668 0.687 0.209 2e-08
Q6XBF8437 Aspartic proteinase CDR1 no no 0.642 0.620 0.236 4e-08
Q766C2438 Aspartic proteinase nepen N/A no 0.661 0.636 0.220 6e-08
A2ZC67410 Aspartic proteinase Asp1 N/A no 0.623 0.641 0.207 2e-07
Q9LZL3453 Aspartic proteinase PCS1 no no 0.675 0.629 0.235 9e-06
Q766C3437 Aspartic proteinase nepen N/A no 0.663 0.640 0.208 2e-05
P00793367 Pepsin A OS=Gallus gallus yes no 0.620 0.713 0.229 6e-05
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function desciption
 Score =  365 bits (937), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 189/374 (50%), Positives = 255/374 (68%), Gaps = 19/374 (5%)

Query: 15  NALLCLPVTTLLWCLLVFGASIVQDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKD 74
           N + C P+T+  +       S +  ++L+EY+PSSSS+SK   CSH LC S S C+S K+
Sbjct: 129 NCVQCAPLTSTYY-------SSLATKDLNEYNPSSSSTSKVFLCSHKLCDSASDCESPKE 181

Query: 75  PCPYIADYSTEDTSSSGYLVDDILHLASFSKHA---PQSSVQSSVIIGCGRKQTGSYLDG 131
            CPY  +Y + +TSSSG LV+DILHL   + +      SSV++ V+IGCG+KQ+G YLDG
Sbjct: 182 QCPYTVNYLSGNTSSSGLLVEDILHLTYNTNNRLMNGSSSVKARVVIGCGKKQSGDYLDG 241

Query: 132 AAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFLPI 191
            APDG+MGLG  ++SVPS L+KAGL++NSFS+CFDE DSG ++FGD GP+ QQST FL +
Sbjct: 242 VAPDGLMGLGPAEISVPSFLSKAGLMRNSFSLCFDEEDSGRIYFGDMGPSIQQSTPFLQL 301

Query: 192 -GEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKR 250
              KY  Y VGVE+ CIGNSCL Q+ F   +DSG SFT+LP EIY +V ++ D+ +++  
Sbjct: 302 DNNKYSGYIVGVEACCIGNSCLKQTSFTTFIDSGQSFTYLPEEIYRKVALEIDRHINATS 361

Query: 251 ISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMST 310
            + +G SW+YCY +S+E   KVP ++L FS N +FV+   +F F +++G   FCL + S 
Sbjct: 362 KNFEGVSWEYCYESSAEP--KVPAIKLKFSHNNTFVIHKPLFVFQQSQGLVQFCLPI-SP 418

Query: 311 DGDYGI--IGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAGQSPNPLPT 368
            G  GI  IGQN+M G+R+VFDREN+KL WS SKC+E  DK       P +  SPNPLPT
Sbjct: 419 SGQEGIGSIGQNYMRGYRMVFDRENMKLGWSPSKCQE--DKIEPPQASPGSTSSPNPLPT 476

Query: 369 TEQQSTSNGQAAAP 382
            EQQS   G A +P
Sbjct: 477 DEQQSR-GGHAVSP 489

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|P00793|PEPA_CHICK Pepsin A OS=Gallus gallus GN=PGA PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query422
224063191 536 predicted protein [Populus trichocarpa] 0.857 0.675 0.615 1e-129
255545620 535 Aspartic proteinase nepenthesin-2 precur 0.848 0.669 0.605 1e-127
359492825 531 PREDICTED: aspartic proteinase-like prot 0.845 0.672 0.590 1e-122
302141912521 unnamed protein product [Vitis vinifera] 0.845 0.685 0.590 1e-122
356551638 880 PREDICTED: aspartic proteinase-like prot 0.895 0.429 0.536 1e-117
296082464 530 unnamed protein product [Vitis vinifera] 0.853 0.679 0.567 1e-116
225438629511 PREDICTED: aspartic proteinase-like prot 0.853 0.704 0.567 1e-115
255576176 542 Aspartic proteinase nepenthesin-1 precur 0.860 0.669 0.567 1e-115
356548395 525 PREDICTED: aspartic proteinase-like prot 0.924 0.742 0.514 1e-114
224083757492 predicted protein [Populus trichocarpa] 0.829 0.711 0.572 1e-111
>gi|224063191|ref|XP_002301033.1| predicted protein [Populus trichocarpa] gi|222842759|gb|EEE80306.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 224/364 (61%), Positives = 286/364 (78%), Gaps = 2/364 (0%)

Query: 35  SIVQDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYST-EDTSSSGYL 93
           +I  DR+LSEY PS SS+S+++SC H LC+  S+CK+ KDPCPYI +Y   E+T+S+G+L
Sbjct: 149 NISLDRDLSEYSPSLSSTSRHLSCDHQLCEWGSNCKNPKDPCPYIFNYDDFENTTSAGFL 208

Query: 94  VDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAK 153
           V+D LHLAS   H  +  +Q+SV++GCGRKQ GS+ DGAAPDGVMGLG GD+SVPSLLAK
Sbjct: 209 VEDKLHLASVGDHTARKMLQASVVLGCGRKQGGSFFDGAAPDGVMGLGPGDISVPSLLAK 268

Query: 154 AGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLT 213
           AGLIQN FS+CFDENDSG + FGD+G A+QQST FLPI   Y AYFVGVESYC+GNSCL 
Sbjct: 269 AGLIQNCFSLCFDENDSGRILFGDRGHASQQSTPFLPIQGTYVAYFVGVESYCVGNSCLK 328

Query: 214 QSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVP 273
           +SGF+ALVDSG+SFT+LP+E+Y E+V +FDK V++KRIS Q   W YCYNASS+E+  +P
Sbjct: 329 RSGFKALVDSGSSFTYLPSEVYNELVSEFDKQVNAKRISFQDGLWDYCYNASSQELHDIP 388

Query: 274 DMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDREN 333
            ++L F +NQ+FVV N  +S P ++GFT+FCL++  TDG YGIIGQNFM+G+R+VFD EN
Sbjct: 389 AIQLKFPRNQNFVVHNPTYSIPHHQGFTMFCLSLQPTDGSYGIIGQNFMIGYRMVFDIEN 448

Query: 334 LKLAWSHSKCEEVIDKSHVHLVPPPAGQSPNPLPTTEQQSTSNGQAAAPPSTAKTAPSKS 393
           LKL WS+S C++  D + VHL PPP  +SPNPLPT EQQS     + AP    +T+ S+S
Sbjct: 449 LKLGWSNSSCQDTSDSADVHLAPPPDNKSPNPLPTNEQQSIPRTPSVAPAVAGRTS-SES 507

Query: 394 IAAS 397
            AAS
Sbjct: 508 SAAS 511

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255545620|ref|XP_002513870.1| Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis] gi|223546956|gb|EEF48453.1| Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359492825|ref|XP_002284255.2| PREDICTED: aspartic proteinase-like protein 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|302141912|emb|CBI19115.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356551638|ref|XP_003544181.1| PREDICTED: aspartic proteinase-like protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|296082464|emb|CBI21469.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225438629|ref|XP_002281243.1| PREDICTED: aspartic proteinase-like protein 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255576176|ref|XP_002528982.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] gi|223531572|gb|EEF33401.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356548395|ref|XP_003542587.1| PREDICTED: aspartic proteinase-like protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|224083757|ref|XP_002307112.1| predicted protein [Populus trichocarpa] gi|222856561|gb|EEE94108.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query422
TAIR|locus:2184138528 AT5G10080 [Arabidopsis thalian 0.777 0.621 0.485 1.9e-83
TAIR|locus:2827921513 AT2G17760 [Arabidopsis thalian 0.620 0.510 0.394 5.4e-47
TAIR|locus:2125324524 AT4G35880 [Arabidopsis thalian 0.627 0.505 0.377 6.9e-47
TAIR|locus:2080903529 AT3G51330 [Arabidopsis thalian 0.677 0.540 0.367 2.3e-46
TAIR|locus:2080913528 AT3G51350 [Arabidopsis thalian 0.670 0.535 0.354 2.5e-42
TAIR|locus:2080908530 AT3G51340 [Arabidopsis thalian 0.689 0.549 0.353 2.4e-37
TAIR|locus:2080973488 AT3G51360 [Arabidopsis thalian 0.675 0.584 0.313 8e-37
TAIR|locus:2083098 632 AT3G50050 [Arabidopsis thalian 0.699 0.466 0.276 7.2e-24
TAIR|locus:2075512488 AT3G02740 [Arabidopsis thalian 0.620 0.536 0.269 4e-23
TAIR|locus:2198753485 AT1G05840 [Arabidopsis thalian 0.677 0.589 0.268 1.1e-21
TAIR|locus:2184138 AT5G10080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
 Identities = 165/340 (48%), Positives = 225/340 (66%)

Query:    74 DPCPYIADYSTEDTSSSGYLVDDILHLASFSKHA---PQSSVQSSVIIGCGRKQTGSYLD 130
             + CPY  +Y + +TSSSG LV+DILHL   + +      SSV++ V+IGCG+KQ+G YLD
Sbjct:   181 EQCPYTVNYLSGNTSSSGLLVEDILHLTYNTNNRLMNGSSSVKARVVIGCGKKQSGDYLD 240

Query:   131 GAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPATQQSTSFLP 190
             G APDG+MGLG  ++SVPS L+KAGL++NSFS+CFDE DSG ++FGD GP+ QQST FL 
Sbjct:   241 GVAPDGLMGLGPAEISVPSFLSKAGLMRNSFSLCFDEEDSGRIYFGDMGPSIQQSTPFLQ 300

Query:   191 I-GEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSK 249
             +   KY  Y VGVE+ CIGNSCL Q+ F   +DSG SFT+LP EIY +V ++ D+ +++ 
Sbjct:   301 LDNNKYSGYIVGVEACCIGNSCLKQTSFTTFIDSGQSFTYLPEEIYRKVALEIDRHINAT 360

Query:   250 RISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMS 309
               + +G SW+YCY +S+E   KVP ++L FS N +FV+   +F F +++G   FCL + S
Sbjct:   361 SKNFEGVSWEYCYESSAEP--KVPAIKLKFSHNNTFVIHKPLFVFQQSQGLVQFCLPI-S 417

Query:   310 TDGDYGI--IGQNFMMGHRIVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAGQSPNPLP 367
               G  GI  IGQN+M G+R+VFDREN+KL WS SKC+E  DK       P +  SPNPLP
Sbjct:   418 PSGQEGIGSIGQNYMRGYRMVFDRENMKLGWSPSKCQE--DKIEPPQASPGSTSSPNPLP 475

Query:   368 TTEQQSTSNGQXXXXXXXXXXXXXXXIAASAQQLDSVLRV 407
             T EQQS   G                 ++S+    S++R+
Sbjct:   476 TDEQQSRG-GHAVSPAIAGKTPSKTPSSSSSYSFSSIMRL 514
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0031225 "anchored to membrane" evidence=TAS
GO:0046658 "anchored to plasma membrane" evidence=IDA
TAIR|locus:2827921 AT2G17760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2125324 AT4G35880 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080903 AT3G51330 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080913 AT3G51350 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080908 AT3G51340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080973 AT3G51360 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083098 AT3G50050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075512 AT3G02740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2198753 AT1G05840 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LX20ASPL1_ARATH3, ., 4, ., 2, 3, ., -0.50530.84120.6723yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.23LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query422
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 4e-24
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 1e-23
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 2e-22
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 1e-16
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 4e-16
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 2e-13
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 7e-10
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 2e-09
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 3e-07
cd06098317 cd06098, phytepsin, Phytepsin, a plant homolog of 8e-04
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information 
 Score =  100 bits (251), Expect = 4e-24
 Identities = 66/290 (22%), Positives = 99/290 (34%), Gaps = 77/290 (26%)

Query: 76  CPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPD 135
           C Y   Y  + +S+SG L  +       S   P      +V  GCG    G    GA  D
Sbjct: 31  CSYEYSYG-DGSSTSGVLATETFTFGDSSVSVP------NVAFGCGTDNEGGSFGGA--D 81

Query: 136 GVMGLGLGDVSVPSLLAKAGLIQNSFSICF----DENDSGSVFFGD---QGPATQQSTSF 188
           G++GLG G +S+ S L   G   N FS C     D   S  +  GD    G +    T  
Sbjct: 82  GILGLGRGPLSLVSQLGSTG---NKFSYCLVPHDDTGGSSPLILGDAADLGGSGVVYTPL 138

Query: 189 LPIGEKYDAYFVGVESYCIGNSCLTQSGF----------QALVDSGASFTFLPTEIYAEV 238
           +        Y+V +E   +G   L                 ++DSG + T+LP   Y ++
Sbjct: 139 VKNPANPTYYYVNLEGISVGGKRLPIPPSVFAIDSDGSGGTIIDSGTTLTYLPDPAYPDL 198

Query: 239 VVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPEN- 297
            + FD                                               +   PEN 
Sbjct: 199 TLHFD-------------------------------------------GGADLELPPENY 215

Query: 298 ---EGFTVFCLTVM-STDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKC 343
               G  V CL ++ S+ G   I+G        + +D EN +L ++ + C
Sbjct: 216 FVDVGEGVVCLAILSSSSGGVSILGNIQQQNFLVEYDLENSRLGFAPADC 265

This family contains pepsin like aspartic proteases from plants including Chloroplast Nucleoids DNA-binding Protease and Nucellin. Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco and Nucellins are important regulators of nucellar cell's progressive degradation after ovule fertilization. Structurally, aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. The N- and C-terminal domains, although structurally related by a 2-fold axis, have only limited sequence homology except the vicinity of the active site. This suggests that the enzymes evolved by an ancient duplication event. The enzymes specifically cleave bonds in peptides which have at least six residues in length with hydrophobic residues in both the P1 and P1' positions. The active site is located at the groove formed by the two lobes, with an extended loop projecting over the cleft to form an 11-residue flap, which encloses substrates and inhibitors in the active site. Specificity is determined by nearest-neighbor hydrophobic residues surrounding the catalytic aspartates, and by three residues in the flap. The enzymes are mostly secreted from cells as inactive proenzymes that activate autocatalytically at acidic pH. Length = 265
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|133162 cd06098, phytepsin, Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 422
PLN03146431 aspartyl protease family protein; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.97
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.93
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.86
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 97.06
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 95.15
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.02
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 92.62
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 91.95
PF1365090 Asp_protease_2: Aspartyl protease 88.27
PF1365090 Asp_protease_2: Aspartyl protease 87.55
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 85.56
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 84.44
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 84.31
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 81.73
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 81.27
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2e-59  Score=473.44  Aligned_cols=325  Identities=24%  Similarity=0.464  Sum_probs=265.3

Q ss_pred             CceeEeecCCCceEEEEEecCCCCeee--eecccCCccccCCCCCCCCCCCCCCCcccCCCCcCCCCCC---CCCCCCCC
Q 014597            1 MLGAICFGSHANAYNALLCLPVTTLLW--CLLVFGASIVQDRNLSEYDPSSSSSSKNVSCSHPLCKSRS---SCKSLKDP   75 (422)
Q Consensus         1 ~~~~i~iGtP~Q~~~vi~DT~GSs~~W--c~~c~~~~~~~~~~~~~y~p~~SsT~~~~~C~~~~C~~~~---~C~~~~~~   75 (422)
                      ++++|.||||||++.|+||| ||+++|  |..|..   |..+..+.|||++|+||+.++|+++.|....   .|... +.
T Consensus        85 Y~v~i~iGTPpq~~~vi~DT-GS~l~Wv~C~~C~~---C~~~~~~~fdps~SST~~~~~C~s~~C~~~~~~~~c~~~-~~  159 (431)
T PLN03146         85 YLMNISIGTPPVPILAIADT-GSDLIWTQCKPCDD---CYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQASCSDE-NT  159 (431)
T ss_pred             EEEEEEcCCCCceEEEEECC-CCCcceEcCCCCcc---cccCCCCcccCCCCCCCcccCCCCcccccCCCCCCCCCC-CC
Confidence            36899999999999999999 999999  555543   3334568999999999999999999997642   37543 46


Q ss_pred             CCceeecCCCCceEEEEEEEEEEEeccCCCCCCCCccccceEEeceeccCCCCCCCCCCCeEeecCCCCCchhHHhhhcC
Q 014597           76 CPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAG  155 (422)
Q Consensus        76 c~~~i~Y~dG~s~~~G~l~~D~l~lg~~~~~~~~~~~~~~~~FGc~~~~~g~~~~~~~~dGIlGLg~~~~Sl~~qL~~~g  155 (422)
                      |.|.+.|+|| +.+.|.+++|+|+|++.....   ..++++.|||++.+.+.|..  ..+||||||++.+|+++||... 
T Consensus       160 c~y~i~Ygdg-s~~~G~l~~Dtltlg~~~~~~---~~v~~~~FGc~~~~~g~f~~--~~~GilGLG~~~~Sl~sql~~~-  232 (431)
T PLN03146        160 CTYSYSYGDG-SFTKGNLAVETLTIGSTSGRP---VSFPGIVFGCGHNNGGTFDE--KGSGIVGLGGGPLSLISQLGSS-  232 (431)
T ss_pred             CeeEEEeCCC-CceeeEEEEEEEEeccCCCCc---ceeCCEEEeCCCCCCCCccC--CCceeEecCCCCccHHHHhhHh-
Confidence            9999999997 778999999999998753221   24679999999988876642  4799999999999999999763 


Q ss_pred             CCCCceEEeecC-----CCceEEEECCCCC---CCCeeeecccCCCCCCceEEeEeEEEEcceEeccCC--------CcE
Q 014597          156 LIQNSFSICFDE-----NDSGSVFFGDQGP---ATQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSG--------FQA  219 (422)
Q Consensus       156 ~i~~~FS~cl~~-----~~~G~l~fG~~d~---~~~~~tp~~~~~~~~~~y~V~l~~i~vg~~~~~~~~--------~~~  219 (422)
                       +.++|||||.+     ...|.|+||+...   ..+.|||++.+. ...+|.|+|++|+||++.+....        .++
T Consensus       233 -~~~~FSycL~~~~~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~-~~~~y~V~L~gIsVgg~~l~~~~~~~~~~~~g~~  310 (431)
T PLN03146        233 -IGGKFSYCLVPLSSDSNGTSKINFGTNAIVSGSGVVSTPLVSKD-PDTFYYLTLEAISVGSKKLPYTGSSKNGVEEGNI  310 (431)
T ss_pred             -hCCcEEEECCCCCCCCCCcceEEeCCccccCCCCceEcccccCC-CCCeEEEeEEEEEECCEECcCCccccccCCCCcE
Confidence             55799999964     2479999998643   236799998543 24789999999999999876422        369


Q ss_pred             EEcccccccccCHHHHHHHHHHHHhhccccccccccccccccccccccccccCceEEEEEcCCeEEEEeCceEEeecCCC
Q 014597          220 LVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEG  299 (422)
Q Consensus       220 iiDSGTs~~~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~y~~~~~~~  299 (422)
                      ||||||++++||+++|++|+++|.+++...+.......++.||.....  ..+|+|+|+|+ |+.+.|+++.|++...+ 
T Consensus       311 iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~--~~~P~i~~~F~-Ga~~~l~~~~~~~~~~~-  386 (431)
T PLN03146        311 IIDSGTTLTLLPSDFYSELESAVEEAIGGERVSDPQGLLSLCYSSTSD--IKLPIITAHFT-GADVKLQPLNTFVKVSE-  386 (431)
T ss_pred             EEeCCccceecCHHHHHHHHHHHHHHhccccCCCCCCCCCccccCCCC--CCCCeEEEEEC-CCeeecCcceeEEEcCC-
Confidence            999999999999999999999999988654333222346789985432  46999999997 58899999888887543 


Q ss_pred             ccEEEEEEEeCCCCceeEccceeeeeEEEEeCCCCEEEEeeccccc
Q 014597          300 FTVFCLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHSKCEE  345 (422)
Q Consensus       300 ~~~~Cl~i~~~~~~~~ILG~~fl~~~yvvfD~e~~rIGfa~~~c~~  345 (422)
                       +.+|+++.... +.+|||+.|||++|||||++++|||||+.+|.+
T Consensus       387 -~~~Cl~~~~~~-~~~IlG~~~q~~~~vvyDl~~~~igFa~~~C~~  430 (431)
T PLN03146        387 -DLVCFAMIPTS-SIAIFGNLAQMNFLVGYDLESKTVSFKPTDCTK  430 (431)
T ss_pred             -CcEEEEEecCC-CceEECeeeEeeEEEEEECCCCEEeeecCCcCc
Confidence             57899988764 579999999999999999999999999999975

>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query422
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 2e-52
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 9e-47
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 4e-41
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 7e-15
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 1e-14
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 2e-14
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 2e-13
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 3e-13
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 4e-13
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 3e-12
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 9e-12
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 2e-11
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 2e-11
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 5e-11
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 7e-11
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 8e-11
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 9e-11
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 1e-10
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 1e-10
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 1e-10
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 2e-10
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 2e-10
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 3e-10
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 4e-10
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 6e-10
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 4e-09
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 4e-09
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 6e-09
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 2e-08
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 8e-08
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-07
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 3e-06
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 1e-04
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 5e-06
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  179 bits (455), Expect = 2e-52
 Identities = 53/327 (16%), Positives = 99/327 (30%), Gaps = 32/327 (9%)

Query: 45  YDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFS 104
              +  S +    C      SR  C    + C  ++       +  G L +D+L + +  
Sbjct: 65  CHSTQCSRANTHQCLSCPAASRPGCHK--NTCGLMSTNPITQQTGLGELGEDVLAIHATQ 122

Query: 105 KHAPQSSVQSSV---IIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSF 161
               Q     +V   +  C               GV GLG   +S+P+ LA    +Q  F
Sbjct: 123 GSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQF 182

Query: 162 SICF--DENDSGSVFFGDQGPATQQSTSFL---------PIGEKYDAYFVGVESYCIGNS 210
           + C        G++ FGD     +Q  +                   Y V V S  I   
Sbjct: 183 TTCLSRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQH 242

Query: 211 CL-----------TQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWK 259
            +             +    ++ +      L   +Y      F + +  +        + 
Sbjct: 243 SVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFG 302

Query: 260 YCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYG---I 316
            C+N++        D+ +       + +           G  V CL VM+          
Sbjct: 303 LCFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQPG--VTCLGVMNGGMQPRAEIT 360

Query: 317 IGQNFMMGHRIVFDRENLKLAWSHSKC 343
           +G   +  + +VFD    ++ +S S  
Sbjct: 361 LGARQLEENLVVFDLARSRVGFSTSSL 387
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Length = 241 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query422
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.77
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.62
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 93.43
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 93.36
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=2.7e-59  Score=470.45  Aligned_cols=321  Identities=19%  Similarity=0.292  Sum_probs=255.2

Q ss_pred             CceeEeecCCCceEEEEEecCCCCeeeeecccCCccccCCCCCCCCCCCCCCCcccCCCCcCCCCCC--CC---CC----
Q 014597            1 MLGAICFGSHANAYNALLCLPVTTLLWCLLVFGASIVQDRNLSEYDPSSSSSSKNVSCSHPLCKSRS--SC---KS----   71 (422)
Q Consensus         1 ~~~~i~iGtP~Q~~~vi~DT~GSs~~Wc~~c~~~~~~~~~~~~~y~p~~SsT~~~~~C~~~~C~~~~--~C---~~----   71 (422)
                      .+++|.||||||+|.|+||| ||+++|+. |..             +.+|+||+.+.|.++.|....  .|   ..    
T Consensus        22 Y~~~i~iGTPpq~~~v~~DT-GS~~lWv~-c~~-------------c~~Sst~~~v~C~s~~C~~~~~~~~~~c~s~~~~   86 (413)
T 3vla_A           22 YVTTINQRTPLVSENLVVDL-GGRFLWVD-CDQ-------------NYVSSTYRPVRCRTSQCSLSGSIACGDCFNGPRP   86 (413)
T ss_dssp             EEEEEEETTTTEEEEEEEET-TCSSEEEE-CSS-------------SCCCTTCEECBTTSHHHHHTTCCEEECCSSCCBT
T ss_pred             EEEEEEcCCCCcceEEEEeC-CChhhhcc-cCC-------------CCCCCCcCccCCCcccccccccCCCcccccCCCC
Confidence            37899999999999999999 99999963 211             137999999999999996532  22   11    


Q ss_pred             --CCCCCCceeec-CCCCceEEEEEEEEEEEeccCCCCCCC-CccccceEEeceeccC--CCCCCCCCCCeEeecCCCCC
Q 014597           72 --LKDPCPYIADY-STEDTSSSGYLVDDILHLASFSKHAPQ-SSVQSSVIIGCGRKQT--GSYLDGAAPDGVMGLGLGDV  145 (422)
Q Consensus        72 --~~~~c~~~i~Y-~dG~s~~~G~l~~D~l~lg~~~~~~~~-~~~~~~~~FGc~~~~~--g~~~~~~~~dGIlGLg~~~~  145 (422)
                        .++.|.|.+.| +|| ++++|++++|+|+|+..++.... ...++++.|||+..+.  +.+   ..+|||||||++.+
T Consensus        87 ~c~~~~c~~~i~Y~~d~-~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~---~~~dGIlGLg~~~l  162 (413)
T 3vla_A           87 GCNNNTCGVFPENPVIN-TATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLA---SGVVGMAGLGRTRI  162 (413)
T ss_dssp             TBCSSEEEECCEETTTT-EECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSC---TTCCEEEECSSSSS
T ss_pred             CCCCCcCcceeecCcCC-ceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcc---cccccccccCCCCc
Confidence              12469999999 475 78999999999999854321000 0245789999999863  332   25799999999999


Q ss_pred             chhHHhhhcCCCCCceEEeecCC--CceEEEECCCCCC---------C-CeeeecccCCCC----------CCceEEeEe
Q 014597          146 SVPSLLAKAGLIQNSFSICFDEN--DSGSVFFGDQGPA---------T-QQSTSFLPIGEK----------YDAYFVGVE  203 (422)
Q Consensus       146 Sl~~qL~~~g~i~~~FS~cl~~~--~~G~l~fG~~d~~---------~-~~~tp~~~~~~~----------~~~y~V~l~  203 (422)
                      |++.||+++++++++||+||.+.  ..|+|+||+.+..         . +.|||++.++..          ..+|.|+|+
T Consensus       163 Sl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~V~l~  242 (413)
T 3vla_A          163 ALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIGVK  242 (413)
T ss_dssp             SHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCEECCC
T ss_pred             chHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceEEEEEE
Confidence            99999999988899999999873  5799999998742         4 899999876432          269999999


Q ss_pred             EEEEcceEeccC----------CCcEEEcccccccccCHHHHHHHHHHHHhhccc--cccccccccccccccccccc---
Q 014597          204 SYCIGNSCLTQS----------GFQALVDSGASFTFLPTEIYAEVVVKFDKLVSS--KRISLQGNSWKYCYNASSEE---  268 (422)
Q Consensus       204 ~i~vg~~~~~~~----------~~~~iiDSGTs~~~Lp~~~y~~l~~~~~~~~~~--~~~~~~~~~~~~C~~~~~~~---  268 (422)
                      +|.||++.+...          ..++||||||++++||+++|++|+++|.+++..  .........++.||+.++..   
T Consensus       243 ~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~  322 (413)
T 3vla_A          243 SIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFSTDNILSTR  322 (413)
T ss_dssp             EEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCEEECTTCCEET
T ss_pred             EEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcceeccCCccccc
Confidence            999999998743          357999999999999999999999999988752  11111223567999876432   


Q ss_pred             -cccCceEEEEEcC-CeEEEEeCceEEeecCCCccEEEEEEEeCCC---CceeEccceeeeeEEEEeCCCCEEEEeecc
Q 014597          269 -MLKVPDMRLIFSK-NQSFVVRNHIFSFPENEGFTVFCLTVMSTDG---DYGIIGQNFMMGHRIVFDRENLKLAWSHSK  342 (422)
Q Consensus       269 -~~~~P~i~~~f~g-g~~~~l~~~~y~~~~~~~~~~~Cl~i~~~~~---~~~ILG~~fl~~~yvvfD~e~~rIGfa~~~  342 (422)
                       ...+|+|+|+|+| ++.|+|++++|++...+  +.+|++++..+.   +.||||++|||+||+|||++++|||||++.
T Consensus       323 ~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~~~riGfa~~~  399 (413)
T 3vla_A          323 LGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTL  399 (413)
T ss_dssp             TEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEECEEEEESSCSSSEEECHHHHTTEEEEEETTTTEEEEEEEG
T ss_pred             cccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEEEEEecCCCcccceeEehhhhcCeEEEEECCCCEEEEEEec
Confidence             2479999999987 47899999888886543  578999987642   589999999999999999999999999863
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 422
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 9e-31
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 1e-21
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 2e-19
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 9e-19
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 9e-19
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 2e-18
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 4e-18
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 1e-17
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 1e-17
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 2e-17
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 7e-17
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 2e-16
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 4e-16
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 4e-16
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 5e-16
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 1e-15
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 4e-15
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 4e-15
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 1e-14
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 4e-14
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 3e-13
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 2e-10
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  119 bits (299), Expect = 9e-31
 Identities = 53/325 (16%), Positives = 104/325 (32%), Gaps = 33/325 (10%)

Query: 46  DPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSK 105
               +++     C  P C S         PC            ++G L        +   
Sbjct: 54  TCLLANAYPAPGCPAPSCGSDKH----DKPCTAYPYNPVSGACAAGSLSHTRFVANTTDG 109

Query: 106 HAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICF 165
             P S V   V+  C   +  + L   +  GV GL    +++P+ +A A  + N F +C 
Sbjct: 110 SKPVSKVNVGVLAACAPSKLLASLPRGS-TGVAGLANSGLALPAQVASAQKVANRFLLCL 168

Query: 166 DENDSGSVFFGDQGPATQQSTSFLP-----IGEKYDAYFVGVESYCIGNSCL-----TQS 215
                G   FG       Q T  +P           A+++   S  +G++ +       +
Sbjct: 169 PTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALA 228

Query: 216 GFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSK--------RISLQGNSWKYCYNAS-- 265
               ++ +   +  L  ++Y  ++  F K ++++        R       +  CY+    
Sbjct: 229 TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTL 288

Query: 266 --SEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVM------STDGDYGII 317
             +     VP+++L       + +          +G        M             I+
Sbjct: 289 GNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVIL 348

Query: 318 GQNFMMGHRIVFDRENLKLAWSHSK 342
           G   M    + FD E  +L +S   
Sbjct: 349 GGAQMEDFVLDFDMEKKRLGFSRLP 373
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query422
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Acid protease
species: Bread mold (Rhizopus chinensis) [TaxId: 4843]

Probab=100.00  E-value=2.2e-50  Score=391.47  Aligned_cols=290  Identities=20%  Similarity=0.357  Sum_probs=235.9

Q ss_pred             CceeEeecCCCceEEEEEecCCCCeee--eecccCCccccCCCCCCCCCCCCCCCcccCCCCcCCCCCCCCCCCCCCCCc
Q 014597            1 MLGAICFGSHANAYNALLCLPVTTLLW--CLLVFGASIVQDRNLSEYDPSSSSSSKNVSCSHPLCKSRSSCKSLKDPCPY   78 (422)
Q Consensus         1 ~~~~i~iGtP~Q~~~vi~DT~GSs~~W--c~~c~~~~~~~~~~~~~y~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~   78 (422)
                      ++++|.||||+|+|+|+||| ||+++|  |..|..+.    +.++.|+|++|+|++...                  |.|
T Consensus        17 Y~~~i~iGtP~Q~~~v~vDT-GS~~~Wv~~~~C~~c~----~~~~~y~~~~SsT~~~~~------------------~~~   73 (325)
T d2apra_          17 YYGQVTIGTPGKKFNLDFDT-GSSDLWIASTLCTNCG----SGQTKYDPNQSSTYQADG------------------RTW   73 (325)
T ss_dssp             EEEEEEETTTTEEEEEEEET-TCCCCEEEBTTCSSCC----TTSCCBCGGGCTTCEEEE------------------EEE
T ss_pred             EEEEEEEeCCCEEEEEEEEC-CCCcEEEeCCCCCccc----cCCCccCcccCCceeECC------------------eEE
Confidence            36899999999999999999 999999  45564432    234689999999999865                  789


Q ss_pred             eeecCCCCceEEEEEEEEEEEeccCCCCCCCCccccceEEeceeccCCCCCCCCCCCeEeecCCCC-------CchhHHh
Q 014597           79 IADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGD-------VSVPSLL  151 (422)
Q Consensus        79 ~i~Y~dG~s~~~G~l~~D~l~lg~~~~~~~~~~~~~~~~FGc~~~~~g~~~~~~~~dGIlGLg~~~-------~Sl~~qL  151 (422)
                      .+.|++| +.+.|.+++|++++++.        ...++.|+++......+... ..+||+|||...       .+++.+|
T Consensus        74 ~~~y~~g-~~~~G~~~~D~~~~~~~--------~~~~~~~~~~~~~~~~~~~~-~~~GilGlg~~~~~~~~~~~~~~~~l  143 (325)
T d2apra_          74 SISYGDG-SSASGILAKDNVNLGGL--------LIKGQTIELAKREAASFASG-PNDGLLGLGFDTITTVRGVKTPMDNL  143 (325)
T ss_dssp             EEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTS-SCSEEEECSCGGGCSSTTCCCHHHHH
T ss_pred             EEEeCCC-CeEEEEEEeeeEEeeee--------eccCcceeeeeeeccccccc-ccCcccccccccccccccCCcchhHH
Confidence            9999997 78999999999999985        35688999988765433322 579999999653       3578899


Q ss_pred             hhcCCC-CCceEEeecCC---CceEEEECCCCCC----CCeeeecccCCCCCCceEEeEeEEEEcceEeccCCCcEEEcc
Q 014597          152 AKAGLI-QNSFSICFDEN---DSGSVFFGDQGPA----TQQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDS  223 (422)
Q Consensus       152 ~~~g~i-~~~FS~cl~~~---~~G~l~fG~~d~~----~~~~tp~~~~~~~~~~y~V~l~~i~vg~~~~~~~~~~~iiDS  223 (422)
                      .++|+| +++||+||.+.   ..|.|+||++|+.    .+.|+|+...   ..+|.|.+++|.++++.+. ....++|||
T Consensus       144 ~~~g~i~~~~fs~~l~~~~~~~~g~l~~Gg~d~~~~~~~~~~~~~~~~---~~~~~v~l~~i~i~~~~~~-~~~~~iiDS  219 (325)
T d2apra_         144 ISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNS---RGWWGITVDRATVGTSTVA-SSFDGILDT  219 (325)
T ss_dssp             HHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCT---TSSCEEEECEEEETTEEEE-CCEEEEECT
T ss_pred             HhhccccceeEEEEeccCCCCCCeEEEecCCCchhhccceeeEeecCC---CceEEEEEeeEEECCEeec-ceeeeeccC
Confidence            999998 68999999763   4699999999986    3679998643   4789999999999999886 556799999


Q ss_pred             cccccccCHHHHHHHHHHHHhhccccccccccccccccccccccccccCceEEEEEcCCeEEEEeCceEEeecCCCccEE
Q 014597          224 GASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVF  303 (422)
Q Consensus       224 GTs~~~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~y~~~~~~~~~~~  303 (422)
                      ||++++||.++|++|.+.+.+....          +.+|..+|.. ..+|.|+|+|+ |.++.|+++.|++...+  +.+
T Consensus       220 Gt~~~~lp~~~~~~l~~~~~~~~~~----------~~~~~~~C~~-~~~p~i~f~f~-g~~~~i~~~~y~~~~~~--~~C  285 (325)
T d2apra_         220 GTTLLILPNNIAASVARAYGASDNG----------DGTYTISCDT-SAFKPLVFSIN-GASFQVSPDSLVFEEFQ--GQC  285 (325)
T ss_dssp             TCSSEEEEHHHHHHHHHHHTCEECS----------SSCEEECSCG-GGCCCEEEEET-TEEEEECGGGGEEEEET--TEE
T ss_pred             CCccccCCHHHHHHHHHHhCCcccC----------CCceeecccC-CCCCcEEEEEC-CEEEEEChHHeEEecCC--CEE
Confidence            9999999999999999988643221          1223333322 46899999995 68999999999887653  455


Q ss_pred             EEEEEeCCCCceeEccceeeeeEEEEeCCCCEEEEeec
Q 014597          304 CLTVMSTDGDYGIIGQNFMMGHRIVFDRENLKLAWSHS  341 (422)
Q Consensus       304 Cl~i~~~~~~~~ILG~~fl~~~yvvfD~e~~rIGfa~~  341 (422)
                      |++|...+.+.+|||++|||++|+|||+|++|||||++
T Consensus       286 ~~~i~~~~~~~~iLG~~flr~~y~vfD~~~~~IGfAp~  323 (325)
T d2apra_         286 IAGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPV  323 (325)
T ss_dssp             EESEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred             EEEEccCCCCCEEECHHHhCcEEEEEECCCCEEeEEEc
Confidence            56888777778999999999999999999999999986
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure