Citrus Sinensis ID: 014620

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-
MYTCIAHTHGVSIKLPELFSPKITRSFVSSRRDFKVLAVTSSLKEASNYIPAAPIFLPEGPWKQIPGGVTAAEGFKAAGIYAGVRAKGEKPDVALVLCDVDAAAAGAFTTNVVAAAPVVYCKKTLDSSKTARAVLINAGQANAATGDAGYQDVVDCANTVAMLLKMRSEEVLIESTGVIGQRIKKDALLNSLPKLVNSLSSSTEGADSAAVAITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATMLGVVTTDASVDSDVWRKMVKVAVNRSFNQITVDGDTSTNDTVIALASGLSRSSRISSVDCNEAKQLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAAGYAGVSFYQNKLRILLGDSLLMDGGQPLPFDR
cccccccccEEEEEcccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccEEEEEEEEEcccccccccEEEEEEccccEEEEEcccccccccHHHHHHHHcccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHccccccEEEcccccccccccHHHHHccHHHHHHHcccccccHHHHHHHHHcccccccEEEEEEEEccEEEEEEEEEcccccccccccccHHHHHccccccHHHHHHHHHHHHccccccEEccccccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEccccHHHHHHHHHHHcccHHHHHHHHcccccHHHHHHHHccccccccccEEEEEEccEEEEEccccccccc
ccccccccEEEEEEccccccccccccccccccccEEEEEEccHHHHHcccccccccccccccEEEccccccccccEEccEEcccccccccccEEEEEEccccEEEEEEEccEEEEccEEEEHHHHcccccEEEEEEEcccccccccHcHHHHHHHHHHHHHHHccccHccEEEEEccEccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccccEEEEEEEEccEEEEEEEEEcccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHcccEEEEccccccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEcccccHHHHHHHHHHHHcccHHHHHHHcccccHHHHHHHHccccccccHccEEEEEccEEEEEccccccccc
mytciahthgvsiklpelfspkitrsFVSSRRDFKVLAVTSSLKeasnyipaapiflpegpwkqipggvtaaegfKAAGIYAGvrakgekpdvALVLCDVDAAAAGAFTTNVVAAAPVVYCKKTLDSSKTARAVLINAgqanaatgdagyqdVVDCANTVAMLLKMRSEEVLIESTGVIGQRIKKDALLNSLPKLVnslssstegadsAAVAITTTDLVSKSVAVESQVGGTYirvggmakgsgmihpnmATMLGVVttdasvdsDVWRKMVKVAVNRSFnqitvdgdtstnDTVIALASGlsrssrissvdcnEAKQLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAvygrdpnwgrIAAAAGYAGVSFYQNKLRILLGDsllmdggqplpfdr
mytciahthgvsiklpelfspKITRSFVSSRRDFKVLAVTsslkeasnyIPAAPIFLPEGPWKQIPGGVTAAEGFKAAGIYAGVRAKGEKPDVALVLCDVDAAAAGAFTTNVVAAAPVVYCKKTLDSSKTARAVLINAGqanaatgdagyqDVVDCANTVAMLLKMRSEEVLIESTGVIGQRIKKDALLNSLPKLVNSLSSSTEGADSAAVAITttdlvsksvavesqvggtYIRVGGMAKGSGMIHPNMATMLGVVTTDASVDSDVWRKMVKVAVNRsfnqitvdgdtstnDTVIALASGLSRSSRISSVDCNEAKQLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAAGYAGVSFYQNKLRILLGDsllmdggqplpfdr
MYTCIAHTHGVSIKLPELFSPKITRSFVSSRRDFKVLAVTSSLKEASNYIPAAPIFLPEGPWKQIPGGVTAAEGFKAAGIYAGVRAKGEKPDvalvlcdvdaaaagafttnvvaaaPVVYCKKTLDSSKTARAVLINAGQANAATGDAGYQDVVDCANTVAMLLKMRSEEVLIESTGVIGQRIKKDALLNSLPKLVNSLSSSTEGADSAAVAITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATMLGvvttdasvdsdvWRKMVKVAVNRSFNQITVDGDTSTNDTVialasglsrssrissVDCNEAKQLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAAKIarsvassslvkaavYGRDPNWGRIAAAAGYAGVSFYQNKLRILLGDSLLMDGGQPLPFDR
**TCIAHTHGVSIKLPELFSPKITRSFVSSRRDFKVLAVTSSLKEASNYIPAAPIFLPEGPWKQIPGGVTAAEGFKAAGIYAGVRAKGEKPDVALVLCDVDAAAAGAFTTNVVAAAPVVYCKKTLDSSKTARAVLINAGQANAATGDAGYQDVVDCANTVAMLLKMRSEEVLIESTGVIGQRIKKDALLNSLPKL**************AVAITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATMLGVVTTDASVDSDVWRKMVKVAVNRSFNQITVDGDTSTNDTVIALASGL*****ISSVDCNEAKQLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAAGYAGVSFYQNKLRILLGDSLLM**********
*******THGVSIKLPELFSPKITRSFVSSRR*********************PIFLPEGPWKQIPGGVTAAEGFKAAGIYAGVRAKGEKPDVALVLCDVDAAAAGAFTTNVVAAAPVVYCKKTLDSSKTARAVLINAGQANAATGDAGYQDVVDCANTVAMLLKMRSEEVLIESTGVIGQRIKKDALLNSLPKLVNSLSSSTEGADSAAVAITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATMLGVVTTDASVDSDVWRKMVKVAVNRSFNQITVDGDTSTNDTVIALASGLSRSSRISSVDCNEAKQLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAAGYAGVSFYQNKLRILLGDSLLMDGGQPL****
MYTCIAHTHGVSIKLPELFSPKITRSFVSSRRDFKVLAVTSSLKEASNYIPAAPIFLPEGPWKQIPGGVTAAEGFKAAGIYAGVRAKGEKPDVALVLCDVDAAAAGAFTTNVVAAAPVVYCKKTLDSSKTARAVLINAGQANAATGDAGYQDVVDCANTVAMLLKMRSEEVLIESTGVIGQRIKKDALLNSLPKLVN***********AAVAITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATMLGVVTTDASVDSDVWRKMVKVAVNRSFNQITVDGDTSTNDTVIALASGLSRSSRISSVDCNEAKQLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAAGYAGVSFYQNKLRILLGDSLLMDGGQPLPFDR
MYTCIAHTHGVSIKLPELFSPKITRSFVSSRRDFKVLAVTSSLKEASNYIPAAPIFLPEGPWKQIPGGVTAAEGFKAAGIYAGVRAKGEKPDVALVLCDVDAAAAGAFTTNVVAAAPVVYCKKTLDSSKTARAVLINAGQANAATGDAGYQDVVDCANTVAMLLKMRSEEVLIESTGVIGQRIKKDALLNSLPKLVNSLSSSTEGADSAAVAITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATMLGVVTTDASVDSDVWRKMVKVAVNRSFNQITVDGDTSTNDTVIALASGLSRSSRISSVDCNEAKQLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAAGYAGVSFYQNKLRILLGDSLLMDGGQPL****
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MYTCIAHTHGVSIKLPELFSPKITRSFVSSRRDFKVLAVTSSLKEASNYIPAAPIFLPEGPWKQIPGGVTAAEGFKAAGIYAGVRAKGEKPDVALVLCDVDAAAAGAFTTNVVAAAPVVYCKKTLDSSKTARAVLINAGQANAATGDAGYQDVVDCANTVAMLLKMRSEEVLIESTGVIGQRIKKDALLNSLPKLVNSLSSSTEGADSAAVAITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATMLGVVTTDASVDSDVWRKMVKVAVNRSFNQITVDGDTSTNDTVIALASGLSRSSRISSVDCNEAKQLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAAGYAGVSFYQNKLRILLGDSLLMDGGQPLPFDR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query421 2.2.26 [Sep-21-2011]
B9SZB6469 Arginine biosynthesis bif N/A no 0.995 0.893 0.814 0.0
Q9ZUR7468 Arginine biosynthesis bif yes no 0.990 0.891 0.791 0.0
B9NAN0481 Arginine biosynthesis bif yes no 1.0 0.875 0.788 0.0
A5AEC8510 Arginine biosynthesis bif no no 0.995 0.821 0.703 1e-174
Q3C251460 Arginine biosynthesis bif N/A no 0.964 0.882 0.746 1e-171
C5WPC2464 Arginine biosynthesis bif N/A no 0.954 0.866 0.728 1e-168
C0PF72464 Arginine biosynthesis bif N/A no 0.952 0.864 0.723 1e-166
Q10N79463 Arginine biosynthesis bif yes no 0.893 0.812 0.765 1e-160
B8AL33463 Arginine biosynthesis bif N/A no 0.893 0.812 0.765 1e-160
A9SLE5520 Arginine biosynthesis bif N/A no 0.883 0.715 0.701 1e-144
>sp|B9SZB6|ARGJ_RICCO Arginine biosynthesis bifunctional protein ArgJ, chloroplastic OS=Ricinus communis GN=RCOM_1202350 PE=3 SV=1 Back     alignment and function desciption
 Score =  675 bits (1742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/421 (81%), Positives = 373/421 (88%), Gaps = 2/421 (0%)

Query: 1   MYTCIAHTHGVSIKLPELFSPKITRSFVSSRRDFKVLAVTSSLKEASNYIPAAPIFLPEG 60
           MYTC  H   VSIK P+L S K  R F  S+R+FKV A+ SS+ EASNYIPAAPI +PEG
Sbjct: 1   MYTCAPHF--VSIKFPDLHSSKTLRPFGMSKREFKVFALASSVNEASNYIPAAPILIPEG 58

Query: 61  PWKQIPGGVTAAEGFKAAGIYAGVRAKGEKPDVALVLCDVDAAAAGAFTTNVVAAAPVVY 120
           PW QIPGGVTAA+GFKA GIY G+RAKGEKPD+ALV CDVDAAAAG+FTTN+VAAAPV+Y
Sbjct: 59  PWNQIPGGVTAAKGFKAVGIYGGLRAKGEKPDLALVTCDVDAAAAGSFTTNMVAAAPVLY 118

Query: 121 CKKTLDSSKTARAVLINAGQANAATGDAGYQDVVDCANTVAMLLKMRSEEVLIESTGVIG 180
           CK  LD S+TARAVLINAGQANAATGDAGYQDV++CA+TVAM+LK++ EEVLIESTGVIG
Sbjct: 119 CKHALDISQTARAVLINAGQANAATGDAGYQDVLECADTVAMMLKVKREEVLIESTGVIG 178

Query: 181 QRIKKDALLNSLPKLVNSLSSSTEGADSAAVAITTTDLVSKSVAVESQVGGTYIRVGGMA 240
           QRIKKDALLN+LP LVNSL+SS EGA SAAVAITTTDLVSKSVA+ESQ+GG  IRVGGMA
Sbjct: 179 QRIKKDALLNALPTLVNSLTSSVEGAGSAAVAITTTDLVSKSVAIESQIGGINIRVGGMA 238

Query: 241 KGSGMIHPNMATMLGVVTTDASVDSDVWRKMVKVAVNRSFNQITVDGDTSTNDTVIALAS 300
           KGSGMIHPNMATMLGV+TTDA V +DVWRKMV+ AVNRSFNQITVDGDTSTNDTVIALAS
Sbjct: 239 KGSGMIHPNMATMLGVITTDALVQTDVWRKMVQTAVNRSFNQITVDGDTSTNDTVIALAS 298

Query: 301 GLSRSSRISSVDCNEAKQLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAAK 360
           GLS S  ISS+DC  A QLQACLDAVMQGLAKSIAWDGEGATCLIEV V G  SE +AAK
Sbjct: 299 GLSGSMSISSIDCTRAIQLQACLDAVMQGLAKSIAWDGEGATCLIEVTVAGTESEVKAAK 358

Query: 361 IARSVASSSLVKAAVYGRDPNWGRIAAAAGYAGVSFYQNKLRILLGDSLLMDGGQPLPFD 420
           IARSVASSSLVKAAVYGRDPNWGRIAAAAGYAG+ F+QNKLRILLGD LLMD GQPL FD
Sbjct: 359 IARSVASSSLVKAAVYGRDPNWGRIAAAAGYAGIPFHQNKLRILLGDILLMDNGQPLAFD 418

Query: 421 R 421
           R
Sbjct: 419 R 419
Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.
Ricinus communis (taxid: 3988)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1
>sp|Q9ZUR7|ARGJ_ARATH Arginine biosynthesis bifunctional protein ArgJ, chloroplastic OS=Arabidopsis thaliana GN=At2g37500 PE=1 SV=2 Back     alignment and function description
>sp|B9NAN0|ARGJ_POPTR Arginine biosynthesis bifunctional protein ArgJ, chloroplastic OS=Populus trichocarpa GN=POPTRDRAFT_746969 PE=3 SV=1 Back     alignment and function description
>sp|A5AEC8|ARGJ_VITVI Arginine biosynthesis bifunctional protein ArgJ, chloroplastic OS=Vitis vinifera GN=VITISV_037692 PE=3 SV=1 Back     alignment and function description
>sp|Q3C251|ARGJ_CITLA Arginine biosynthesis bifunctional protein ArgJ, chloroplastic OS=Citrullus lanatus PE=1 SV=1 Back     alignment and function description
>sp|C5WPC2|ARGJ_SORBI Arginine biosynthesis bifunctional protein ArgJ, chloroplastic OS=Sorghum bicolor GN=Sb01g039230 PE=3 SV=1 Back     alignment and function description
>sp|C0PF72|ARGJ_MAIZE Arginine biosynthesis bifunctional protein ArgJ, chloroplastic OS=Zea mays PE=2 SV=1 Back     alignment and function description
>sp|Q10N79|ARGJ_ORYSJ Arginine biosynthesis bifunctional protein ArgJ, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0279400 PE=2 SV=1 Back     alignment and function description
>sp|B8AL33|ARGJ_ORYSI Arginine biosynthesis bifunctional protein ArgJ, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_11009 PE=2 SV=1 Back     alignment and function description
>sp|A9SLE5|ARGJ_PHYPA Arginine biosynthesis bifunctional protein ArgJ, chloroplastic OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_213576 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query421
359481336470 PREDICTED: arginine biosynthesis bifunct 0.995 0.891 0.805 0.0
255581038469 arginine biosynthesis protein argJ 1, pu 0.995 0.893 0.814 0.0
18404441468 arginine biosynthesis bifunctional prote 0.990 0.891 0.791 0.0
297827257468 arginine biosynthesis protein ArgJ famil 0.990 0.891 0.789 0.0
358346886477 Arginine biosynthesis bifunctional prote 0.997 0.880 0.764 0.0
356548150464 PREDICTED: arginine biosynthesis bifunct 0.983 0.892 0.774 0.0
356537349460 PREDICTED: arginine biosynthesis bifunct 0.971 0.889 0.774 0.0
224114595481 predicted protein [Populus trichocarpa] 1.0 0.875 0.788 0.0
306531023510 RecName: Full=Arginine biosynthesis bifu 0.995 0.821 0.703 1e-173
122213597460 RecName: Full=Arginine biosynthesis bifu 0.964 0.882 0.746 1e-169
>gi|359481336|ref|XP_002274213.2| PREDICTED: arginine biosynthesis bifunctional protein ArgJ, chloroplastic-like [Vitis vinifera] gi|297741477|emb|CBI32609.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  679 bits (1753), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/422 (80%), Positives = 373/422 (88%), Gaps = 3/422 (0%)

Query: 1   MYTCIAHTHGVSIKLPELFSPKITRSFVS-SRRDFKVLAVTSSLKEASNYIPAAPIFLPE 59
           M+ C+ H    SI  P+L   +    F S  RR F++LA++SS+ EASNYI AAPIFLP+
Sbjct: 1   MFLCVPHY--TSITFPQLNDGRKVLRFGSYQRRGFRILAMSSSVSEASNYITAAPIFLPD 58

Query: 60  GPWKQIPGGVTAAEGFKAAGIYAGVRAKGEKPDVALVLCDVDAAAAGAFTTNVVAAAPVV 119
           GPWKQIPGGVTAA+GFKAAG+Y G+RAKGEKPD+ALV CDVDA +AGAFTTNVVAAAPVV
Sbjct: 59  GPWKQIPGGVTAAKGFKAAGLYGGLRAKGEKPDLALVACDVDAISAGAFTTNVVAAAPVV 118

Query: 120 YCKKTLDSSKTARAVLINAGQANAATGDAGYQDVVDCANTVAMLLKMRSEEVLIESTGVI 179
           YCK  LD SKTARAVLINAGQANAATGDAGYQDV++CAN +A LL+MR EEVLIESTGVI
Sbjct: 119 YCKNALDMSKTARAVLINAGQANAATGDAGYQDVIECANALAKLLQMRPEEVLIESTGVI 178

Query: 180 GQRIKKDALLNSLPKLVNSLSSSTEGADSAAVAITTTDLVSKSVAVESQVGGTYIRVGGM 239
           G RIKKDALLNSLPKLV+SLSSSTEGADSAAVAITTTDLVSKSVA+ES+VGGT IRVGGM
Sbjct: 179 GHRIKKDALLNSLPKLVSSLSSSTEGADSAAVAITTTDLVSKSVAIESEVGGTNIRVGGM 238

Query: 240 AKGSGMIHPNMATMLGVVTTDASVDSDVWRKMVKVAVNRSFNQITVDGDTSTNDTVIALA 299
           AKGSGMIHPNMATMLGVVTTDA V SDVWRKMV++AVNRSFNQITVDGDTSTNDTVIALA
Sbjct: 239 AKGSGMIHPNMATMLGVVTTDALVASDVWRKMVQIAVNRSFNQITVDGDTSTNDTVIALA 298

Query: 300 SGLSRSSRISSVDCNEAKQLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAA 359
           SGLS S+RISS+  +EA QLQACLDAVMQGLAKSIAWDGEGATCLIEV V GA +EA+AA
Sbjct: 299 SGLSGSTRISSLISHEAIQLQACLDAVMQGLAKSIAWDGEGATCLIEVSVNGAENEADAA 358

Query: 360 KIARSVASSSLVKAAVYGRDPNWGRIAAAAGYAGVSFYQNKLRILLGDSLLMDGGQPLPF 419
           K+ARSVASSSL KAAVYGRDPNWGRIA AAGYAG+ F  NKL I LG+ LLM+GGQPLPF
Sbjct: 359 KVARSVASSSLAKAAVYGRDPNWGRIACAAGYAGIPFQPNKLHISLGEILLMEGGQPLPF 418

Query: 420 DR 421
           DR
Sbjct: 419 DR 420

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255581038|ref|XP_002531335.1| arginine biosynthesis protein argJ 1, putative [Ricinus communis] gi|306531013|sp|B9SZB6.1|ARGJ_RICCO RecName: Full=Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Includes: RecName: Full=Glutamate N-acetyltransferase; Short=GAT; AltName: Full=Ornithine acetyltransferase; Short=OATase; AltName: Full=Ornithine transacetylase; Includes: RecName: Full=Amino-acid acetyltransferase; AltName: Full=N-acetylglutamate synthase; Short=AGS; Contains: RecName: Full=Arginine biosynthesis bifunctional protein ArgJ alpha chain; Contains: RecName: Full=Arginine biosynthesis bifunctional protein ArgJ beta chain; Flags: Precursor gi|223529057|gb|EEF31042.1| arginine biosynthesis protein argJ 1, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|18404441|ref|NP_565863.1| arginine biosynthesis bifunctional protein ArgJ [Arabidopsis thaliana] gi|75268042|sp|Q9ZUR7.2|ARGJ_ARATH RecName: Full=Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Includes: RecName: Full=Glutamate N-acetyltransferase; Short=GAT; AltName: Full=Ornithine acetyltransferase; Short=OATase; AltName: Full=Ornithine transacetylase; Includes: RecName: Full=Amino-acid acetyltransferase; AltName: Full=N-acetylglutamate synthase; Short=AGS; Contains: RecName: Full=Arginine biosynthesis bifunctional protein ArgJ alpha chain; Contains: RecName: Full=Arginine biosynthesis bifunctional protein ArgJ beta chain; Flags: Precursor gi|15146222|gb|AAK83594.1| At2g37500/F3G5.29 [Arabidopsis thaliana] gi|19699134|gb|AAL90933.1| At2g37500/F3G5.29 [Arabidopsis thaliana] gi|20197472|gb|AAC98066.2| putative glutamate/ornithine acetyltransferase [Arabidopsis thaliana] gi|21537150|gb|AAM61491.1| putative glutamate/ornithine acetyltransferase [Arabidopsis thaliana] gi|330254314|gb|AEC09408.1| arginine biosynthesis bifunctional protein ArgJ [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297827257|ref|XP_002881511.1| arginine biosynthesis protein ArgJ family [Arabidopsis lyrata subsp. lyrata] gi|297327350|gb|EFH57770.1| arginine biosynthesis protein ArgJ family [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|358346886|ref|XP_003637495.1| Arginine biosynthesis bifunctional protein ArgJ [Medicago truncatula] gi|355503430|gb|AES84633.1| Arginine biosynthesis bifunctional protein ArgJ [Medicago truncatula] Back     alignment and taxonomy information
>gi|356548150|ref|XP_003542466.1| PREDICTED: arginine biosynthesis bifunctional protein ArgJ, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356537349|ref|XP_003537190.1| PREDICTED: arginine biosynthesis bifunctional protein ArgJ, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|224114595|ref|XP_002332319.1| predicted protein [Populus trichocarpa] gi|306531010|sp|B9NAN0.1|ARGJ_POPTR RecName: Full=Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Includes: RecName: Full=Glutamate N-acetyltransferase; Short=GAT; AltName: Full=Ornithine acetyltransferase; Short=OATase; AltName: Full=Ornithine transacetylase; Includes: RecName: Full=Amino-acid acetyltransferase; AltName: Full=N-acetylglutamate synthase; Short=AGS; Contains: RecName: Full=Arginine biosynthesis bifunctional protein ArgJ alpha chain; Contains: RecName: Full=Arginine biosynthesis bifunctional protein ArgJ beta chain; Flags: Precursor gi|222832566|gb|EEE71043.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|306531023|sp|A5AEC8.1|ARGJ_VITVI RecName: Full=Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Includes: RecName: Full=Glutamate N-acetyltransferase; Short=GAT; AltName: Full=Ornithine acetyltransferase; Short=OATase; AltName: Full=Ornithine transacetylase; Includes: RecName: Full=Amino-acid acetyltransferase; AltName: Full=N-acetylglutamate synthase; Short=AGS; Contains: RecName: Full=Arginine biosynthesis bifunctional protein ArgJ alpha chain; Contains: RecName: Full=Arginine biosynthesis bifunctional protein ArgJ beta chain; Flags: Precursor gi|147801761|emb|CAN77854.1| hypothetical protein VITISV_037692 [Vitis vinifera] Back     alignment and taxonomy information
>gi|122213597|sp|Q3C251.1|ARGJ_CITLA RecName: Full=Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Includes: RecName: Full=Glutamate N-acetyltransferase; Short=GAT; AltName: Full=Ornithine acetyltransferase; Short=OATase; AltName: Full=Ornithine transacetylase; Includes: RecName: Full=Amino-acid acetyltransferase; AltName: Full=N-acetylglutamate synthase; Short=AGS; Contains: RecName: Full=Arginine biosynthesis bifunctional protein ArgJ alpha chain; Contains: RecName: Full=Arginine biosynthesis bifunctional protein ArgJ beta chain; Flags: Precursor gi|78000225|dbj|BAE46903.1| glutamate N-acetyltransferase [Citrullus lanatus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query421
TAIR|locus:2049781468 AT2G37500 [Arabidopsis thalian 0.990 0.891 0.665 8.9e-141
TIGR_CMR|CHY_2264399 CHY_2264 "arginine biosynthesi 0.831 0.877 0.377 6.3e-53
TIGR_CMR|DET_1256405 DET_1256 "arginine biosynthesi 0.814 0.846 0.374 1.2e-51
ASPGD|ASPL0000065370464 AN7722 [Emericella nidulans (t 0.814 0.739 0.347 4.2e-47
TIGR_CMR|BA_4354407 BA_4354 "glutamate N-acetyltra 0.821 0.850 0.329 1.9e-44
UNIPROTKB|A4R5F6464 MGG_04210 "Arginine biosynthes 0.798 0.724 0.338 6.4e-44
POMBASE|SPBC1271.14445 SPBC1271.14 "glutamate N-acety 0.769 0.728 0.346 1e-43
TIGR_CMR|GSU_2049393 GSU_2049 "glutamate N-acetyltr 0.798 0.854 0.338 1.3e-43
TIGR_CMR|CPS_1312424 CPS_1312 "arginine biosynthesi 0.833 0.827 0.331 4.6e-41
CGD|CAL0003026439 ECM42 [Candida albicans (taxid 0.786 0.753 0.334 5.9e-41
TAIR|locus:2049781 AT2G37500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1377 (489.8 bits), Expect = 8.9e-141, P = 8.9e-141
 Identities = 281/422 (66%), Positives = 314/422 (74%)

Query:     1 MYTCIAHTHGVSIKLPELFSPKITRSFV-SSRRDFKVLAVTSSLKEASNYIPAAPIFLPE 59
             M++C +HTH VS KLP  F+PK   SFV SSRR+ +V AV ++++EAS  IPAAPI LP+
Sbjct:     1 MHSC-SHTHFVSFKLPHFFAPK---SFVVSSRRELRVFAVATTVEEASGNIPAAPISLPQ 56

Query:    60 GPWKQIPGGVTAAEGFKAAGIYAGVRAKGEKPDXXXXXXXXXXXXXXXXXXXXXXXXPVV 119
             G WKQI GGVTAA+GFKAAG+YAG+RA G+KPD                        PVV
Sbjct:    57 GSWKQIAGGVTAAKGFKAAGMYAGLRAAGKKPDLALVTCDVEAVAAGVFTTNVVAAAPVV 116

Query:   120 YCKKTLDSSKTARAVLINAGQANAATGDAGYQDVVDCANTVAMLLKMRSEEVLIESTGVI 179
             YCKK L++SKTARAVLINAGQANAATGDAGYQD++DC  ++A LLK++ EEVLIESTGVI
Sbjct:   117 YCKKVLETSKTARAVLINAGQANAATGDAGYQDMLDCVGSIATLLKVKPEEVLIESTGVI 176

Query:   180 GQRIKKDALLNSLPKLVNSLSSSTEGADSAAVAITTTDLVSKSVAVESQVGGTYIRVGGM 239
             GQRIKK+ LL++LP LVNS S S E ADSAAVAITTTDLVSKSVAVESQVGG  IRVGGM
Sbjct:   177 GQRIKKEELLHALPTLVNSRSDSVEEADSAAVAITTTDLVSKSVAVESQVGGIKIRVGGM 236

Query:   240 AKGSGMIHPNMATMLGXXXXXXXXXXXXWRKMVKVAVNRSFNQITVDGDTSTNDTVXXXX 299
             AKGSGMIHPNMATMLG            WRKMVKVAVNRSFNQITVDGDTSTNDTV    
Sbjct:   237 AKGSGMIHPNMATMLGVITTDALVESDIWRKMVKVAVNRSFNQITVDGDTSTNDTVIALA 296

Query:   300 XXXXXXXXXXXVDCNEAKQLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAA 359
                        ++C EA QLQACLDAVMQGLAKSIAWDGEGATCLIEV V G  +EAEAA
Sbjct:   297 SGLSGSPSISSLNCKEAAQLQACLDAVMQGLAKSIAWDGEGATCLIEVTVKGTETEAEAA 356

Query:   360 KIXXXXXXXXXXXXXXYGRDPNWGRIAAAAGYAGVSFYQNKLRILLGDSLLMDGGQPLPF 419
             KI              YGRDPNWGRIAAAAGYAGVSF  +KL+I LG+  LM+ GQPLPF
Sbjct:   357 KIARSVASSSLVKAAVYGRDPNWGRIAAAAGYAGVSFQMDKLKISLGEFSLMESGQPLPF 416

Query:   420 DR 421
             DR
Sbjct:   417 DR 418
GO:0004042 "acetyl-CoA:L-glutamate N-acetyltransferase activity" evidence=IEA
GO:0004358 "glutamate N-acetyltransferase activity" evidence=IEA;ISS
GO:0005739 "mitochondrion" evidence=ISM
GO:0006526 "arginine biosynthetic process" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA
TIGR_CMR|CHY_2264 CHY_2264 "arginine biosynthesis bifunctional protein ArgJ" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|DET_1256 DET_1256 "arginine biosynthesis bifunctional protein ArgJ" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
ASPGD|ASPL0000065370 AN7722 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4354 BA_4354 "glutamate N-acetyltransferase/amino-acid acetyltransferase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|A4R5F6 MGG_04210 "Arginine biosynthesis bifunctional protein ArgJ, mitochondrial" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
POMBASE|SPBC1271.14 SPBC1271.14 "glutamate N-acetyltransferase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_2049 GSU_2049 "glutamate N-acetyltransferase/amino-acid acetyltransferase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_1312 CPS_1312 "arginine biosynthesis bifunctional protein ArgJ" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
CGD|CAL0003026 ECM42 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q46I07ARGJ_PROMT2, ., 3, ., 1, ., 10.49300.83130.8333yesno
Q67KC5ARGJ_SYMTH2, ., 3, ., 1, ., 10.48170.83610.8756yesno
Q92BB8ARGJ_LISIN2, ., 3, ., 1, ., 10.38650.83130.8793yesno
Q5MZY1ARGJ_SYNP62, ., 3, ., 1, ., 10.56660.84560.8578yesno
Q3A9W1ARGJ_CARHZ2, ., 3, ., 1, ., 10.45650.83370.8796yesno
Q7V3M5ARGJ_PROMP2, ., 3, ., 1, ., 10.45480.81470.8532yesno
A4S1K1ARGJ_OSTLU2, ., 3, ., 1, ., 10.58130.88360.8069yesno
Q7NE46ARGJ_GLOVI2, ., 3, ., 1, ., 10.51380.84790.8793yesno
Q10N79ARGJ_ORYSJ2, ., 3, ., 1, ., 10.76590.89310.8120yesno
Q7V436ARGJ_PROMM2, ., 3, ., 1, ., 10.52630.83130.8196yesno
A5AEC8ARGJ_VITVI2, ., 3, ., 1, ., 10.70340.99520.8215nono
Q8DV45ARGJ_STRMU2, ., 3, ., 1, ., 10.43730.83370.8841yesno
Q8CUN1ARGJ_OCEIH2, ., 3, ., 1, ., 10.43450.81710.8452yesno
Q8CSF9ARGJ_STAES2, ., 3, ., 1, ., 10.42010.82890.8790yesno
Q5L1V4ARGJ_GEOKA2, ., 3, ., 1, ., 10.41070.82660.8487yesno
P74122ARGJ_SYNY32, ., 3, ., 1, ., 10.54720.84560.8619N/Ano
Q6HE29ARGJ_BACHK2, ., 3, ., 1, ., 10.41350.82660.8529yesno
Q3Z731ARGJ_DEHE12, ., 3, ., 1, ., 10.460.81470.8469yesno
Q7U3S6ARGJ_SYNPX2, ., 3, ., 1, ., 10.52340.83610.8606yesno
C0PF72ARGJ_MAIZE2, ., 3, ., 1, ., 10.72310.95240.8642N/Ano
Q8DHN4ARGJ_THEEB2, ., 3, ., 1, ., 10.57100.84320.8472yesno
Q3ZYG4ARGJ_DEHSC2, ., 3, ., 1, ., 10.44720.81470.8469yesno
Q5HP22ARGJ_STAEQ2, ., 3, ., 1, ., 10.42010.82890.8790yesno
Q7VEF9ARGJ_PROMA2, ., 3, ., 1, ., 10.47150.84080.8571yesno
C5WPC2ARGJ_SORBI2, ., 3, ., 1, ., 10.72880.95480.8663N/Ano
Q57645ARGJ_METJA2, ., 3, ., 1, ., 3, 50.42610.80760.8457yesno
Q8YVA8ARGJ1_NOSS12, ., 3, ., 1, ., 10.59160.84560.8619yesno
Q635F1ARGJ_BACCZ2, ., 3, ., 1, ., 10.40790.82660.8529yesno
Q5M122ARGJ_STRT12, ., 3, ., 1, ., 10.41890.83130.8816yesno
Q9CHD4ARGJ_LACLA2, ., 3, ., 1, ., 10.41550.82180.8737yesno
P62060ARGJ_DESVH2, ., 3, ., 1, ., 10.45110.80990.8676yesno
Q81M96ARGJ_BACAN2, ., 3, ., 1, ., 10.41350.82660.8550yesno
Q818W0ARGJ_BACCR2, ., 3, ., 1, ., 10.41350.82660.8529yesno
B9NAN0ARGJ_POPTR2, ., 3, ., 1, ., 10.78881.00.8752yesno
Q5WEW8ARGJ_BACSK2, ., 3, ., 1, ., 10.4250.83370.8602yesno
B9SZB6ARGJ_RICCO2, ., 3, ., 1, ., 10.81470.99520.8933N/Ano
Q5M5L0ARGJ_STRT22, ., 3, ., 1, ., 10.41620.83130.8816yesno
Q8R7B9ARGJ_THETN2, ., 3, ., 1, ., 10.43490.83370.8709yesno
A9SLE5ARGJ_PHYPA2, ., 3, ., 1, ., 10.70160.88360.7153N/Ano
B8AL33ARGJ_ORYSI2, ., 3, ., 1, ., 10.76590.89310.8120N/Ano
Q9ZUR7ARGJ_ARATH2, ., 3, ., 1, ., 10.79140.99040.8910yesno
Q3C251ARGJ_CITLA2, ., 3, ., 1, ., 10.74690.96430.8826N/Ano
Q9K8V3ARGJ_BACHD2, ., 3, ., 1, ., 10.42010.81710.8369yesno
P62057ARGJ_BACC12, ., 3, ., 1, ., 10.40790.82660.8550yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.1.10.979
3rd Layer2.3.10.983
3rd Layer2.3.1.350.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query421
cd02152390 cd02152, OAT, Ornithine acetyltransferase (OAT) fa 1e-171
PRK05388395 PRK05388, argJ, bifunctional ornithine acetyltrans 1e-169
pfam01960380 pfam01960, ArgJ, ArgJ family 1e-165
COG1364404 COG1364, ArgJ, N-acetylglutamate synthase (N-acety 1e-149
TIGR00120404 TIGR00120, ArgJ, glutamate N-acetyltransferase/ami 1e-131
>gnl|CDD|239065 cd02152, OAT, Ornithine acetyltransferase (OAT) family; also referred to as ArgJ Back     alignment and domain information 
 Score =  483 bits (1245), Expect = e-171
 Identities = 177/350 (50%), Positives = 243/350 (69%), Gaps = 5/350 (1%)

Query: 72  AEGFKAAGIYAGVRAKGEKPDVALVLCDVDAAAAGAFTTNVVAAAPVVYCKKTLDSSKTA 131
            +GF+AAG+ AG++  G + D+AL+  DV A AAG FTTN   AAPV+  ++ L +   A
Sbjct: 1   PKGFRAAGVAAGIKKSG-RKDLALIYSDVPATAAGVFTTNKFKAAPVLVSREHL-ADGKA 58

Query: 132 RAVLINAGQANAATGDAGYQDVVDCANTVAMLLKMRSEEVLIESTGVIGQRIKKDALLNS 191
           RAV++N+G ANA TG+ G +D  + A  VA LL +  EEVL+ STGVIG+ +  D +   
Sbjct: 59  RAVVVNSGNANACTGEQGLEDAREMAELVAELLGIPEEEVLVASTGVIGEPLPMDKIRAG 118

Query: 192 LPKLVNSLSSSTEGADSAAVAITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMA 251
           +P+LV SLS   +G ++AA AI TTD   K  AVE ++GG  + +GG+AKGSGMIHPNMA
Sbjct: 119 IPELVASLS--EDGWEAAARAIMTTDTFPKEAAVEVEIGGKTVTIGGIAKGSGMIHPNMA 176

Query: 252 TMLGVVTTDASVDSDVWRKMVKVAVNRSFNQITVDGDTSTNDTVIALASGLSRSSRISSV 311
           TMLG +TTDA++  ++ +  ++ AV+RSFN+ITVDGDTSTNDTV+ LA+G + +  IS  
Sbjct: 177 TMLGFITTDAAISPELLQDALRRAVDRSFNRITVDGDTSTNDTVLLLANGAAGNPPISEE 236

Query: 312 DCNEAKQLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLV 371
           D  + ++ +  L  V   LAK I  DGEGAT LIEV VTGA SE +A K+AR++A+S LV
Sbjct: 237 DP-DLEEFEEALTEVCLDLAKQIVRDGEGATKLIEVTVTGAASEEDARKVARAIANSPLV 295

Query: 372 KAAVYGRDPNWGRIAAAAGYAGVSFYQNKLRILLGDSLLMDGGQPLPFDR 421
           K A++G DPNWGRI AA GY+GV F   ++ I LG  L+++ G+PL +D 
Sbjct: 296 KTAIFGEDPNWGRILAAVGYSGVEFDPERVSISLGGVLVVENGEPLDYDE 345

OAT catalyzes the first and fifth steps in arginine biosynthesis, coupling acetylation of glutamate with deacetylation of N-acetylornithine, which allows recycling of the acetyl group in the arginine biosynthetic pathway. Members of this family may experience feedback inhibition by L-arginine. The active enzyme is a heterotetramer of two alpha and two beta chains, where the alpha and beta chains are the result of autocatalytic cleavage. OATs found in the clavulanic acid biosynthesis gene cluster catalyze the fifth step only, and may utilize acetyl acceptors other than glutamate. Length = 390
>gnl|CDD|235441 PRK05388, argJ, bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; Validated Back     alignment and domain information
>gnl|CDD|216811 pfam01960, ArgJ, ArgJ family Back     alignment and domain information
>gnl|CDD|224283 COG1364, ArgJ, N-acetylglutamate synthase (N-acetylornithine aminotransferase) [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|161718 TIGR00120, ArgJ, glutamate N-acetyltransferase/amino-acid acetyltransferase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 421
PRK05388395 argJ bifunctional ornithine acetyltransferase/N-ac 100.0
TIGR00120404 ArgJ glutamate N-acetyltransferase/amino-acid acet 100.0
cd02152390 OAT Ornithine acetyltransferase (OAT) family; also 100.0
COG1364404 ArgJ N-acetylglutamate synthase (N-acetylornithine 100.0
PF01960388 ArgJ: ArgJ family; InterPro: IPR002813 ArgJ is a b 100.0
KOG2786431 consensus Putative glutamate/ornithine acetyltrans 100.0
cd00123286 DmpA_OAT DmpA/OAT superfamily; composed of L-amino 100.0
cd06845144 Bcl-2_like Apoptosis regulator proteins of the Bcl 82.53
>PRK05388 argJ bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; Validated Back     alignment and domain information 
Probab=100.00  E-value=7.9e-144  Score=1090.72  Aligned_cols=347  Identities=51%  Similarity=0.790  Sum_probs=337.2

Q ss_pred             CccccCceEEeeeEeecccCCCCCcEEEEEeCCCceEEEEecCCCccccchhchHhhcCCCCCeeEEEEecCCccccCcH
Q 014620           68 GVTAAEGFKAAGIYAGVRAKGEKPDVALVLCDVDAAAAGAFTTNVVAAAPVVYCKKTLDSSKTARAVLINAGQANAATGD  147 (421)
Q Consensus        68 gv~~p~GF~aag~~aGiK~~~~k~DLali~sd~pa~~AgvFT~N~~~AAPV~~~r~~l~~~~~~rAvvvNSGnANA~TG~  147 (421)
                      +++.|+||+++|++||||+++ |+||+||+|+.||.+|||||+|+|+||||+|||++|+. +++|||||||||||||||+
T Consensus         1 ~~~~p~Gf~~~g~~aGiK~~~-~~Dlali~s~~pa~~AgvFT~N~~~AAPV~~~~~~l~~-~~~rAvvvNSGnANA~TG~   78 (395)
T PRK05388          1 GVTAPKGFRAAGVAAGIKKSG-RKDLALIVSDGPASAAGVFTTNKFKAAPVLVCREHLAD-GRLRAVVVNSGNANACTGE   78 (395)
T ss_pred             CCCCCceEEEEEEEeccccCC-CCCEEEEEeCCCceEEEEeccCceeeccchHHHHHhcc-CCceEEEEcCCcccccccH
Confidence            467899999999999999865 89999999999999999999999999999999999984 6899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCCcEEEeccccCCcccChHHHHhhHHHHHhhcCCCCccHHHHHHHHcCCCCCccEEEEEE
Q 014620          148 AGYQDVVDCANTVAMLLKMRSEEVLIESTGVIGQRIKKDALLNSLPKLVNSLSSSTEGADSAAVAITTTDLVSKSVAVES  227 (421)
Q Consensus       148 ~G~~da~~~a~~~A~~Lgi~~~~VlvaSTGVIG~~Lpmdki~~~i~~l~~~L~~~~~~~~~aA~AImTTDt~pK~~a~~~  227 (421)
                      +|++|+++|++++|++|+|++++|||+||||||+|||||+|+++||.+..+|+.  ++|++||+||||||||||++++++
T Consensus        79 ~G~~da~~~~~~~A~~l~~~~~~Vlv~STGVIG~~Lpm~ki~~~i~~~~~~l~~--~~~~~aA~AImTTDt~pK~~~~~~  156 (395)
T PRK05388         79 QGLQDARATAEAVAELLGIPAEEVLVASTGVIGEPLPMDKILAGLPAAVAALSE--DGWEDAAEAIMTTDTFPKQAAREV  156 (395)
T ss_pred             HHHHHHHHHHHHHHHHhCCCcccEEEeCchhccCcCCHHHHHHhHHHHHHhcCc--ccHHHHHHHHhcCCCCCceEEEEE
Confidence            999999999999999999999999999999999999999999999999999965  589999999999999999999999


Q ss_pred             EECCeEEEEeEEeccCCcCCCcccchhhhhccCCCCCHHHHHHHHHHHHhcccCceeeCCCCCchhhhhhhhcCCCCCcc
Q 014620          228 QVGGTYIRVGGMAKGSGMIHPNMATMLGVVTTDASVDSDVWRKMVKVAVNRSFNQITVDGDTSTNDTVIALASGLSRSSR  307 (421)
Q Consensus       228 ~i~g~~v~i~GiAKGsGMI~PnMATML~fI~TDA~i~~~~L~~~L~~av~~SFN~ItVDGDtSTNDtvlllAnG~a~~~~  307 (421)
                      +++|++|+|+||||||||||||||||||||+|||+|+++.||++|+++|++|||||||||||||||||++||||++++++
T Consensus       157 ~~~g~~v~i~GiaKGsGMI~PnMATML~fi~TDA~i~~~~L~~~L~~~v~~SFN~ItVDGDtSTNDtv~llAnG~ag~~~  236 (395)
T PRK05388        157 EIDGKTVTIGGIAKGAGMIAPNMATMLAFITTDAAISPEVLQALLREAVDKSFNRITVDGDTSTNDTVLLLANGASGNPE  236 (395)
T ss_pred             EECCEEEEEEEEEeecccCCCcchhhhhheeeCccCCHHHHHHHHHHHHhhCcCCeeECCCcCHHHHHHHHhCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             ccCCCchhHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEEEeCCCCHHHHHHHHHHhhcchhhhhhhhCCCCChhHHHH
Q 014620          308 ISSVDCNEAKQLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAA  387 (421)
Q Consensus       308 i~~~~~~~~~~F~~aL~~v~~~LAk~Iv~DGEGATKli~V~V~GA~s~~~A~~iAraVa~S~LVKtAi~G~DpNWGRIla  387 (421)
                      | + +++++++|+++|.+||++||||||||||||||||||+|+||+|++||+++||+|++||||||||||+|||||||+|
T Consensus       237 i-~-~~~~~~~f~~aL~~v~~~LAk~IvrDGEGATK~i~v~V~gA~s~~~A~~iA~~Ia~S~LVKTAifG~DpNWGRIl~  314 (395)
T PRK05388        237 I-G-DTPDLAAFEEALTEVCQDLAKQIVRDGEGATKLIEVTVTGAASEEDARKIAKAIANSPLVKTAIFGEDPNWGRILA  314 (395)
T ss_pred             C-C-CCchHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEEEeCCCCHHHHHHHHHHHcCChHHHHhHhccCCCHHHHHH
Confidence            8 3 4567899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccCcccccceeEEEeCCEEEeeCCcCCCCC
Q 014620          388 AAGYAGVSFYQNKLRILLGDSLLMDGGQPLPFD  420 (421)
Q Consensus       388 AvG~sg~~~d~~~v~I~~g~~~v~~~G~~~~~d  420 (421)
                      |+||||++|||++++|+||+++|+++|++.+||
T Consensus       315 AiG~sg~~~d~~~v~i~~~~v~v~~~G~~~~~~  347 (395)
T PRK05388        315 AVGYSGADFDPDRLDIYLGGVLVAKNGGPAPFY  347 (395)
T ss_pred             HhcCCCCccchhheEEEECCEEEEeCCCCCCCC
Confidence            999999999999999999999999999999887

>TIGR00120 ArgJ glutamate N-acetyltransferase/amino-acid acetyltransferase Back     alignment and domain information
>cd02152 OAT Ornithine acetyltransferase (OAT) family; also referred to as ArgJ Back     alignment and domain information
>COG1364 ArgJ N-acetylglutamate synthase (N-acetylornithine aminotransferase) [Amino acid transport and metabolism] Back     alignment and domain information
>PF01960 ArgJ: ArgJ family; InterPro: IPR002813 ArgJ is a bifunctional protein that catalyses the first 2 Back     alignment and domain information
>KOG2786 consensus Putative glutamate/ornithine acetyltransferase [Amino acid transport and metabolism] Back     alignment and domain information
>cd00123 DmpA_OAT DmpA/OAT superfamily; composed of L-aminopeptidase D-amidase/D-esterase (DmpA), ornithine acetyltransferase (OAT) and similar proteins Back     alignment and domain information
>cd06845 Bcl-2_like Apoptosis regulator proteins of the Bcl-2 family, named after B-cell lymphoma 2 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query421
1vz6_A393 Ornithine Acetyltransferase (Orf6 Gene Product - Cl 2e-31
1vz8_A393 Ornithine Acetyltransferase (Orf6 Gene Product - Cl 1e-29
3it4_A199 The Crystal Structure Of Ornithine Acetyltransferas 5e-20
1vra_B215 Crystal Structure Of Arginine Biosynthesis Bifuncti 2e-18
1vra_A208 Crystal Structure Of Arginine Biosynthesis Bifuncti 1e-17
2vzk_B213 Structure Of The Acyl-Enzyme Complex Of An N-Termin 3e-13
2vzk_D213 Structure Of The Acyl-Enzyme Complex Of An N-Termin 3e-13
2vzk_A173 Structure Of The Acyl-Enzyme Complex Of An N-Termin 2e-11
2yep_A180 Structure Of An N-Terminal Nucleophile (Ntn) Hydrol 2e-11
3it4_B205 The Crystal Structure Of Ornithine Acetyltransferas 1e-05
>pdb|1VZ6|A Chain A, Ornithine Acetyltransferase (Orf6 Gene Product - Clavulanic Acid Biosynthesis) From Streptomyces Clavuligerus Length = 393 Back     alignment and structure 
Iteration: 1

 Score =  133 bits (334), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 142/292 (48%), Gaps = 17/292 (5%)
Query: 118 VVYCKKTLDSSKTARAVLINAGQANAATGDAGYQDVVDCANTVAMLLKMRSEEVLIESTG 177
           VV C++ + +   AR V++ A  AN ATG  G ++  +    VA  L +   E+LI STG
Sbjct: 54  VVLCREAV-ADGQARGVVVLARNANVATGLEGEENAREVREAVARALGLPEGEMLIASTG 112
Query: 178 VIGQRIKKDALLNSLPKLVNSLSSSTEGADSAAVAITTTDLVSKSVAVESQVGGTYIRVG 237
           VIG++   +++   L  L     +   G D AA AI TTD   K V V   VGG  +   
Sbjct: 113 VIGRQYPMESIREHLKTL--EWPAGEGGFDRAARAIMTTDTRPKEVRV--SVGGATLV-- 166
Query: 238 GMAKGSGMIHPNMATMLGXXXXXXXXXXXXWRKMVKVAVNRSFNQITVDGDTSTNDTVXX 297
           G+AKG GM+ P+MAT+L               ++ +  ++R+FN +++D DTST+DT   
Sbjct: 167 GIAKGVGMLEPDMATLLTFFATDARLDPAEQDRLFRRVMDRTFNAVSIDTDTSTSDTAVL 226
Query: 298 XXXXXXXXXXXXXVDCNEAKQLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAE 357
                            +A + +  L      L K IA DGEGA  LIEV+VTGA  +A+
Sbjct: 227 FANGLAGEV--------DAGEFEEALHTAALALVKDIASDGEGAAKLIEVQVTGARDDAQ 278
Query: 358 AAKIXXXXXXXXXXXXXXYGRDPNWGRIAAAAGYAG--VSFYQNKLRILLGD 407
           A ++              +G DPNWGR+A A G         Q ++ I  G+
Sbjct: 279 AKRVGKTVVNSPLVKTAVHGCDPNWGRVAMAIGKCSDDTDIDQERVTIRFGE 330
>pdb|1VZ8|A Chain A, Ornithine Acetyltransferase (Orf6 Gene Product - Clavulanic Acid Biosynthesis) From Streptomyces Clavuligerus (Semet Structure) Length = 393 Back     alignment and structure
>pdb|3IT4|A Chain A, The Crystal Structure Of Ornithine Acetyltransferase From Mycobacterium Tuberculosis (Rv1653) At 1.7 A Length = 199 Back     alignment and structure
>pdb|1VRA|B Chain B, Crystal Structure Of Arginine Biosynthesis Bifunctional Protein Argj (10175521) From Bacillus Halodurans At 2.00 A Resolution Length = 215 Back     alignment and structure
>pdb|1VRA|A Chain A, Crystal Structure Of Arginine Biosynthesis Bifunctional Protein Argj (10175521) From Bacillus Halodurans At 2.00 A Resolution Length = 208 Back     alignment and structure
>pdb|2VZK|B Chain B, Structure Of The Acyl-Enzyme Complex Of An N-Terminal Nucleophile (Ntn) Hydrolase, Oat2 Length = 213 Back     alignment and structure
>pdb|2VZK|D Chain D, Structure Of The Acyl-Enzyme Complex Of An N-Terminal Nucleophile (Ntn) Hydrolase, Oat2 Length = 213 Back     alignment and structure
>pdb|2VZK|A Chain A, Structure Of The Acyl-Enzyme Complex Of An N-Terminal Nucleophile (Ntn) Hydrolase, Oat2 Length = 173 Back     alignment and structure
>pdb|2YEP|A Chain A, Structure Of An N-Terminal Nucleophile (Ntn) Hydrolase, Oat2, In Complex With Glutamate Length = 180 Back     alignment and structure
>pdb|3IT4|B Chain B, The Crystal Structure Of Ornithine Acetyltransferase From Mycobacterium Tuberculosis (Rv1653) At 1.7 A Length = 205 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query421
1vz6_A393 Ornithine acetyl-transferase; clavulanic acid, N-a 1e-163
1vra_B215 Arginine biosynthesis bifunctional protein ARGJ; 1 3e-86
1vra_A208 Arginine biosynthesis bifunctional protein ARGJ; 1 2e-82
3it4_B205 Arginine biosynthesis bifunctional protein ARGJ be 8e-79
2v4i_B213 Glutamate N-acetyltransferase 2 beta chain; cytopl 1e-75
3it4_A199 Arginine biosynthesis bifunctional protein ARGJ al 2e-73
2v4i_A173 Glutamate N-acetyltransferase 2 alpha chain; cytop 2e-68
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-05
>1vz6_A Ornithine acetyl-transferase; clavulanic acid, N-acetyl- ornithine, N-acetyl-glutamate, antibiotic; 2.75A {Streptomyces clavuligerus} SCOP: d.154.1.2 PDB: 1vz7_A 1vz8_A Length = 393 Back     alignment and structure
 Score =  463 bits (1193), Expect = e-163
 Identities = 118/357 (33%), Positives = 176/357 (49%), Gaps = 18/357 (5%)

Query: 67  GGVTAAEGFKAAGIYAGVRAKGEKPDVALVLCDVDAAAAGAFTTNVVAAAPVVYCKKTLD 126
                  GF       G+   G + D  ++     A  +  FT +  A   VV C++ + 
Sbjct: 4   STPKTPRGFVVHTAPVGLADDG-RDDFTVLASTAPATVSAVFTRSRFAGPSVVLCREAVA 62

Query: 127 SSKTARAVLINAGQANAATGDAGYQDVVDCANTVAMLLKMRSEEVLIESTGVIGQRIKKD 186
             + AR V++ A  AN ATG  G ++  +    VA  L +   E+LI STGVIG++   +
Sbjct: 63  DGQ-ARGVVVLARNANVATGLEGEENAREVREAVARALGLPEGEMLIASTGVIGRQYPME 121

Query: 187 ALLNSLPKLVNSLSSSTEGADSAAVAITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMI 246
           ++   L  L         G D AA AI TTD   K V V     G    + G+AKG GM+
Sbjct: 122 SIREHLKTLEWPAGE--GGFDRAARAIMTTDTRPKEVRVS---VGG-ATLVGIAKGVGML 175

Query: 247 HPNMATMLGVVTTDASVDSDVWRKMVKVAVNRSFNQITVDGDTSTNDTVIALASGLSRSS 306
            P+MAT+L    TDA +D     ++ +  ++R+FN +++D DTST+DT +  A+GL+   
Sbjct: 176 EPDMATLLTFFATDARLDPAEQDRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANGLAGEV 235

Query: 307 RISSVDCNEAKQLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVA 366
                   +A + +  L      L K IA DGEGA  LIEV+VTGA  +A+A ++ ++V 
Sbjct: 236 --------DAGEFEEALHTAALALVKDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVV 287

Query: 367 SSSLVKAAVYGRDPNWGRIAAAAGYAG--VSFYQNKLRILLGDSLLMDGGQPLPFDR 421
           +S LVK AV+G DPNWGR+A A G         Q ++ I  G+  +           
Sbjct: 288 NSPLVKTAVHGCDPNWGRVAMAIGKCSDDTDIDQERVTIRFGEVEVYPPKARGDQAD 344
>1vra_B Arginine biosynthesis bifunctional protein ARGJ; 10175521, S genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.00A {Bacillus halodurans} Length = 215 Back     alignment and structure
>1vra_A Arginine biosynthesis bifunctional protein ARGJ; 10175521, S genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.00A {Bacillus halodurans} Length = 208 Back     alignment and structure
>3it4_B Arginine biosynthesis bifunctional protein ARGJ beta chain; ornithine acetyltransferase, structural genomics; 1.70A {Mycobacterium tuberculosis} PDB: 3it6_B Length = 205 Back     alignment and structure
>2v4i_B Glutamate N-acetyltransferase 2 beta chain; cytoplasm, acyl enzyme, NTN hydrolase, acyltransferase, ornithine acetyl transferase; 2.2A {Streptomyces clavuligerus} PDB: 2vzk_D* 2yep_B* 2vzk_B* 2w4n_B* 2yep_F* Length = 213 Back     alignment and structure
>3it4_A Arginine biosynthesis bifunctional protein ARGJ alpha chain; ornithine acetyltransferase, structural genomics; 1.70A {Mycobacterium tuberculosis} PDB: 3it6_A Length = 199 Back     alignment and structure
>2v4i_A Glutamate N-acetyltransferase 2 alpha chain; cytoplasm, acyl enzyme, NTN hydrolase, acyltransferase, ornithine acetyl transferase; 2.2A {Streptomyces clavuligerus} PDB: 2vzk_A* 2w4n_A* 2yep_A* Length = 173 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query421
1vz6_A393 Ornithine acetyl-transferase; clavulanic acid, N-a 100.0
1vra_A208 Arginine biosynthesis bifunctional protein ARGJ; 1 100.0
3it4_A199 Arginine biosynthesis bifunctional protein ARGJ al 100.0
1vra_B215 Arginine biosynthesis bifunctional protein ARGJ; 1 100.0
2v4i_A173 Glutamate N-acetyltransferase 2 alpha chain; cytop 100.0
3it4_B205 Arginine biosynthesis bifunctional protein ARGJ be 100.0
2v4i_B213 Glutamate N-acetyltransferase 2 beta chain; cytopl 100.0
>1vz6_A Ornithine acetyl-transferase; clavulanic acid, N-acetyl- ornithine, N-acetyl-glutamate, antibiotic; 2.75A {Streptomyces clavuligerus} SCOP: d.154.1.2 PDB: 1vz7_A 1vz8_A Back     alignment and structure
Probab=100.00  E-value=2e-141  Score=1070.41  Aligned_cols=339  Identities=35%  Similarity=0.529  Sum_probs=319.1

Q ss_pred             CCCccccCceEEeeeEeecccCCCCCcEEEEEeCCCceEEEEecCCCccccchhchHhhcCCCCCeeEEEEecCCccccC
Q 014620           66 PGGVTAAEGFKAAGIYAGVRAKGEKPDVALVLCDVDAAAAGAFTTNVVAAAPVVYCKKTLDSSKTARAVLINAGQANAAT  145 (421)
Q Consensus        66 ~ggv~~p~GF~aag~~aGiK~~~~k~DLali~sd~pa~~AgvFT~N~~~AAPV~~~r~~l~~~~~~rAvvvNSGnANA~T  145 (421)
                      +++++.|+||+++|++||||+++ |+||+||+|+.||.+|||||+|+|+||||+|||++|+ ++++||||||||||||||
T Consensus         3 ~~~~~~p~Gf~a~g~~aGiK~~g-r~Dlali~s~~p~~~AgvFT~N~~~AAPV~~~~~~l~-~g~~rAvvvNSGnANA~T   80 (393)
T 1vz6_A            3 DSTPKTPRGFVVHTAPVGLADDG-RDDFTVLASTAPATVSAVFTRSRFAGPSVVLCREAVA-DGQARGVVVLARNANVAT   80 (393)
T ss_dssp             -----CCTTEEEEEECCCSSTTC-CCCEEEEEESSCCEEEEEECCCTTCCHHHHHHHHHTT-TSBCCEEEEEEEECCCSC
T ss_pred             CCCCCCCCeEEEEEEEccccCCC-CCCEEEEEeCCCceEEEEeCCCceeeceehHHHhhcc-cCcceEEEECCCCccccc
Confidence            57899999999999999999876 7999999999999999999999999999999999996 468999999999999999


Q ss_pred             cHHHHHHHHHHHHHHHHHhCCCCCcEEEeccccCCcccChHHHHhhHHHHHhhcCCCCccHHHHHHHHcCCCCCccEEEE
Q 014620          146 GDAGYQDVVDCANTVAMLLKMRSEEVLIESTGVIGQRIKKDALLNSLPKLVNSLSSSTEGADSAAVAITTTDLVSKSVAV  225 (421)
Q Consensus       146 G~~G~~da~~~a~~~A~~Lgi~~~~VlvaSTGVIG~~Lpmdki~~~i~~l~~~L~~~~~~~~~aA~AImTTDt~pK~~a~  225 (421)
                      |++|++|+++|++++|+.|||++++|||+||||||+|||||||+++||.++..|+.  ++|++||+||||||||||++++
T Consensus        81 G~~G~~da~~~~~~~A~~lg~~~~~Vlv~STGVIG~~Lpmdki~~gi~~~~~~l~~--~~~~~aA~AImTTDt~pK~~~~  158 (393)
T 1vz6_A           81 GLEGEENAREVREAVARALGLPEGEMLIASTGVIGRQYPMESIREHLKTLEWPAGE--GGFDRAARAIMTTDTRPKEVRV  158 (393)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEESSCCCCHHHHHHHHTTCCCCSSS--BCHHHHHHHTCSSCSSCEEEEE
T ss_pred             cHHHHHHHHHHHHHHHHHhCCChhhEEEeCcccccCCCCHHHHHHHHHHHHHhccc--cCHHHHHHHHhccCCccEEEEE
Confidence            99999999999999999999999999999999999999999999999999999974  5999999999999999999998


Q ss_pred             EEEECCeEEEEeEEeccCCcCCCcccchhhhhccCCCCCHHHHHHHHHHHHhcccCceeeCCCCCchhhhhhhhcCCCCC
Q 014620          226 ESQVGGTYIRVGGMAKGSGMIHPNMATMLGVVTTDASVDSDVWRKMVKVAVNRSFNQITVDGDTSTNDTVIALASGLSRS  305 (421)
Q Consensus       226 ~~~i~g~~v~i~GiAKGsGMI~PnMATML~fI~TDA~i~~~~L~~~L~~av~~SFN~ItVDGDtSTNDtvlllAnG~a~~  305 (421)
                      ++  +|  |+|+|||||||||||||||||+||+|||+|+++.||++|++++++|||||||||||||||||++||||++| 
T Consensus       159 ~~--~g--v~i~GiAKGsGMI~PnMATML~fi~TDA~i~~~~Lq~~L~~av~~SFN~ItVDGDtSTNDtvlllAnG~ag-  233 (393)
T 1vz6_A          159 SV--GG--ATLVGIAKGVGMLEPDMATLLTFFATDARLDPAEQDRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANGLAG-  233 (393)
T ss_dssp             EE--TT--EEEEEEEECSSSCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHTGGGBCSSSCCCSSCEEEEEEEEEEE-
T ss_pred             EE--CC--EEEEEEEccCccCCCcccceeEEEEecCcCCHHHHHHHHHHHHHhcCCCEeeCCCCchhhhhhheeCCCCC-
Confidence            88  66  99999999999999999999999999999999999999999999999999999999999999999999998 


Q ss_pred             ccccCCCchhHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEEEeCCCCHHHHHHHHHHhhcchhhhhhhhCCCCChhHH
Q 014620          306 SRISSVDCNEAKQLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRI  385 (421)
Q Consensus       306 ~~i~~~~~~~~~~F~~aL~~v~~~LAk~Iv~DGEGATKli~V~V~GA~s~~~A~~iAraVa~S~LVKtAi~G~DpNWGRI  385 (421)
                      .       ++|+.|+++|++||++||||||||||||||||||+|+||+|++||+++||+|++||||||||||+|||||||
T Consensus       234 ~-------~~~~~f~~aL~~v~~~LA~~IvrDGEGATK~i~v~V~GA~s~~~A~~iA~sIa~S~LVKtAi~G~DpNWGRI  306 (393)
T 1vz6_A          234 E-------VDAGEFEEALHTAALALVKDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVNSPLVKTAVHGCDPNWGRV  306 (393)
T ss_dssp             E-------CCHHHHHHHHHHHHHHHHHHHHHTCTTCSSEEEEEEEEESSHHHHHHHHHHHHTCHHHHHHHHTTCCCHHHH
T ss_pred             C-------ccHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEECCCCHHHHHHHHHHHccCHHHHHHHhcCCCCHHHH
Confidence            1       138899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcccC--cccccceeEEEeCCEEEeeCC-cCCCCC
Q 014620          386 AAAAGYAG--VSFYQNKLRILLGDSLLMDGG-QPLPFD  420 (421)
Q Consensus       386 laAvG~sg--~~~d~~~v~I~~g~~~v~~~G-~~~~~d  420 (421)
                      +||+||||  ++|||++++|+||+++|+++| ++.+||
T Consensus       307 laAvG~sg~~~~~d~~~v~i~~g~v~v~~~G~~~~~~~  344 (393)
T 1vz6_A          307 AMAIGKCSDDTDIDQERVTIRFGEVEVYPPKARGDQAD  344 (393)
T ss_dssp             HHHHHTCTTCTTCCTTTCEEEETTEEEECC-------C
T ss_pred             HhhhccCCCCcccchhheEEEECCEEEEcCCCcCCCCC
Confidence            99999999  999999999999999999999 888887
>1vra_A Arginine biosynthesis bifunctional protein ARGJ; 10175521, S genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.00A {Bacillus halodurans} Back     alignment and structure
>3it4_A Arginine biosynthesis bifunctional protein ARGJ alpha chain; ornithine acetyltransferase, structural genomics; 1.70A {Mycobacterium tuberculosis} PDB: 3it6_A Back     alignment and structure
>1vra_B Arginine biosynthesis bifunctional protein ARGJ; 10175521, S genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.00A {Bacillus halodurans} Back     alignment and structure
>2v4i_A Glutamate N-acetyltransferase 2 alpha chain; cytoplasm, acyl enzyme, NTN hydrolase, acyltransferase, ornithine acetyl transferase; 2.2A {Streptomyces clavuligerus} PDB: 2vzk_A* 2w4n_A* 2yep_A* Back     alignment and structure
>3it4_B Arginine biosynthesis bifunctional protein ARGJ beta chain; ornithine acetyltransferase, structural genomics; 1.70A {Mycobacterium tuberculosis} PDB: 3it6_B Back     alignment and structure
>2v4i_B Glutamate N-acetyltransferase 2 beta chain; cytoplasm, acyl enzyme, NTN hydrolase, acyltransferase, ornithine acetyl transferase; 2.2A {Streptomyces clavuligerus} PDB: 2vzk_D* 2yep_B* 2vzk_B* 2w4n_B* 2yep_F* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 421
d1vz6a_383 d.154.1.2 (A:) Glutamate N-acetyltransferase 2 (or 4e-69
>d1vz6a_ d.154.1.2 (A:) Glutamate N-acetyltransferase 2 (ornithine acetyltransferase) {Streptomyces clavuligerus [TaxId: 1901]} Length = 383 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: DmpA/ArgJ-like
superfamily: DmpA/ArgJ-like
family: ArgJ-like
domain: Glutamate N-acetyltransferase 2 (ornithine acetyltransferase)
species: Streptomyces clavuligerus [TaxId: 1901]

 Score =  221 bits (565), Expect = 4e-69
 Identities = 106/345 (30%), Positives = 168/345 (48%), Gaps = 18/345 (5%)

Query: 74  GFKAAGIYAGVRAKGEKPDVALVLCDVDAAAAGAFTTNVVAAAPVVYCKKTLDSSKTARA 133
           GF       G+   G + D  ++     A  +  FT +  A   VV C++ +   + AR 
Sbjct: 4   GFVVHTAPVGLADDG-RDDFTVLASTAPATVSAVFTRSRFAGPSVVLCREAVADGQ-ARG 61

Query: 134 VLINAGQANAATGDAGYQDVVDCANTVAMLLKMRSEEVLIESTGVIGQRIKKDALLNSLP 193
           V++ A  AN ATG  G ++  +    VA  L +   E+LI STGVIG++   +++   L 
Sbjct: 62  VVVLARNANVATGLEGEENAREVREAVARALGLPEGEMLIASTGVIGRQYPMESIREHLK 121

Query: 194 KLVNSLSSSTEGADSAAVAITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATM 253
            L           +          + + +   E +V      + G+AKG GM+ P+MAT+
Sbjct: 122 TLEW------PAGEGGFDRAARAIMTTDTRPKEVRVSVGGATLVGIAKGVGMLEPDMATL 175

Query: 254 LGVVTTDASVDSDVWRKMVKVAVNRSFNQITVDGDTSTNDTVIALASGLSRSSRISSVDC 313
           L    TDA +D     ++ +  ++R+FN +++D DTST+DT +  A+G            
Sbjct: 176 LTFFATDARLDPAEQDRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANG--------LAGE 227

Query: 314 NEAKQLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKA 373
            +A + +  L      L K IA DGEGA  LIEV+VTGA  +A+A ++ ++V +S LVK 
Sbjct: 228 VDAGEFEEALHTAALALVKDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVNSPLVKT 287

Query: 374 AVYGRDPNWGRIAAAAGYAG--VSFYQNKLRILLGDSLLMDGGQP 416
           AV+G DPNWGR+A A G         Q ++ I  G+  +      
Sbjct: 288 AVHGCDPNWGRVAMAIGKCSDDTDIDQERVTIRFGEVEVYPPKAR 332

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query421
d1vz6a_383 Glutamate N-acetyltransferase 2 (ornithine acetylt 100.0
>d1vz6a_ d.154.1.2 (A:) Glutamate N-acetyltransferase 2 (ornithine acetyltransferase) {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: DmpA/ArgJ-like
superfamily: DmpA/ArgJ-like
family: ArgJ-like
domain: Glutamate N-acetyltransferase 2 (ornithine acetyltransferase)
species: Streptomyces clavuligerus [TaxId: 1901]

Probab=100.00  E-value=1.2e-133  Score=1012.13  Aligned_cols=331  Identities=35%  Similarity=0.521  Sum_probs=313.9

Q ss_pred             ccCceEEeeeEeecccCCCCCcEEEEEeCCCceEEEEecCCCccccchhchHhhcCCCCCeeEEEEecCCccccCcHHHH
Q 014620           71 AAEGFKAAGIYAGVRAKGEKPDVALVLCDVDAAAAGAFTTNVVAAAPVVYCKKTLDSSKTARAVLINAGQANAATGDAGY  150 (421)
Q Consensus        71 ~p~GF~aag~~aGiK~~~~k~DLali~sd~pa~~AgvFT~N~~~AAPV~~~r~~l~~~~~~rAvvvNSGnANA~TG~~G~  150 (421)
                      .|+||++++++||||+++ |+||+||+++.||++|||||+|+|+||||+|||++|+. +++|||||||||||||||++|+
T Consensus         1 sPkGf~~~~~~aGiK~~~-r~DL~li~~~~~~~~AgvFT~N~~~AApV~~~r~~l~~-~~~ravvvNSGnANA~TG~~G~   78 (383)
T d1vz6a_           1 TPRGFVVHTAPVGLADDG-RDDFTVLASTAPATVSAVFTRSRFAGPSVVLCREAVAD-GQARGVVVLARNANVATGLEGE   78 (383)
T ss_dssp             CCTTEEEEEECCCSSTTC-CCCEEEEEESSCCEEEEEECCCTTCCHHHHHHHHHTTT-SBCCEEEEEEEECCCSCHHHHH
T ss_pred             CCCcEEEEEEEecccCCC-CCcEEEEEeCCCCeEEEEEccCCceecccHHHHHHhcc-CCceEEEEecCchhhhccHHHH
Confidence            499999999999999875 78999999999999999999999999999999999985 6899999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEeccccCCcccChHHHHhhHHHHHhhcCCCCccHHHHHHHHcCCCCCccEEEEEEEEC
Q 014620          151 QDVVDCANTVAMLLKMRSEEVLIESTGVIGQRIKKDALLNSLPKLVNSLSSSTEGADSAAVAITTTDLVSKSVAVESQVG  230 (421)
Q Consensus       151 ~da~~~a~~~A~~Lgi~~~~VlvaSTGVIG~~Lpmdki~~~i~~l~~~L~~~~~~~~~aA~AImTTDt~pK~~a~~~~i~  230 (421)
                      +|+++|++.+|+.|+|++++||++||||||+|||||+|+++||.+..+|+.  ++|++||+|||||||+||++.++    
T Consensus        79 ~~a~~~~~~~A~~l~i~~~~Vl~aSTGVIG~~Lp~~kI~~~i~~l~~~l~~--~~~~~AA~AImTTDt~pK~~~i~----  152 (383)
T d1vz6a_          79 ENAREVREAVARALGLPEGEMLIASTGVIGRQYPMESIREHLKTLEWPAGE--GGFDRAARAIMTTDTRPKEVRVS----  152 (383)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGEEEEEEEESSCCCCHHHHHHHHTTCCCCSSS--BCHHHHHHHTCSSCSSCEEEEEE----
T ss_pred             HHHHHHHHHhhhhcccCccceeeeccchhhccccchhhhhhhhhccccccc--chhhhhhhhhccccceeeEEEEE----
Confidence            999999999999999999999999999999999999999999999988864  68999999999999999987543    


Q ss_pred             CeEEEEeEEeccCCcCCCcccchhhhhccCCCCCHHHHHHHHHHHHhcccCceeeCCCCCchhhhhhhhcCCCCCccccC
Q 014620          231 GTYIRVGGMAKGSGMIHPNMATMLGVVTTDASVDSDVWRKMVKVAVNRSFNQITVDGDTSTNDTVIALASGLSRSSRISS  310 (421)
Q Consensus       231 g~~v~i~GiAKGsGMI~PnMATML~fI~TDA~i~~~~L~~~L~~av~~SFN~ItVDGDtSTNDtvlllAnG~a~~~~i~~  310 (421)
                      ++.++|+|||||||||||||||||+||+|||+|+++.||++|++++++|||+|||||||||||||++||||.+++     
T Consensus       153 ~~~~~i~GiaKGsGMI~PnMATML~fi~TDa~i~~~~L~~~l~~~v~~sFN~ItVDGDtSTNDtv~~lAnG~~~~-----  227 (383)
T d1vz6a_         153 VGGATLVGIAKGVGMLEPDMATLLTFFATDARLDPAEQDRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANGLAGE-----  227 (383)
T ss_dssp             ETTEEEEEEEECSSSCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHTGGGBCSSSCCCSSCEEEEEEEEEEEE-----
T ss_pred             eccceEEEEeecchhccccccceEEEEEeccccChHHHHHHHHHhhhcccceeeecCCCCCCcEEEEEecCCccc-----
Confidence            346899999999999999999999999999999999999999999999999999999999999999999998874     


Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEEEeCCCCHHHHHHHHHHhhcchhhhhhhhCCCCChhHHHHhhc
Q 014620          311 VDCNEAKQLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAAG  390 (421)
Q Consensus       311 ~~~~~~~~F~~aL~~v~~~LAk~Iv~DGEGATKli~V~V~GA~s~~~A~~iAraVa~S~LVKtAi~G~DpNWGRIlaAvG  390 (421)
                         ++..+|+++|.+||++|||+||||||||||||||+|+||+|++||+++||+|++||||||||||+|||||||++|+|
T Consensus       228 ---~~~~~f~~aL~~v~~~LA~~Iv~DGEGATK~i~v~V~gA~s~~dA~~iAr~ia~S~LVKtA~~G~DpNWGRI~aAiG  304 (383)
T d1vz6a_         228 ---VDAGEFEEALHTAALALVKDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVNSPLVKTAVHGCDPNWGRVAMAIG  304 (383)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHHTCTTCSSEEEEEEEEESSHHHHHHHHHHHHTCHHHHHHHHTTCCCHHHHHHHHH
T ss_pred             ---chHHHHHHHHHHHHHHHHHHHhhcccccceEEEEEEccCCCHHHHHHHHHHHhhhHHHHHHHhccCCcHHHHHhhhc
Confidence               35678999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccC--cccccceeEEEeCCEEEeeCCcCC
Q 014620          391 YAG--VSFYQNKLRILLGDSLLMDGGQPL  417 (421)
Q Consensus       391 ~sg--~~~d~~~v~I~~g~~~v~~~G~~~  417 (421)
                      |+|  ++|||++|+|+||+++++++|...
T Consensus       305 ~~~~~~~~d~~~i~i~~~~~~v~~~g~~~  333 (383)
T d1vz6a_         305 KCSDDTDIDQERVTIRFGEVEVYPPKARG  333 (383)
T ss_dssp             TCTTCTTCCTTTCEEEETTEEEECC----
T ss_pred             cccCCcccchhheEEEECCEEEEecccCC
Confidence            987  899999999999999999887543