Citrus Sinensis ID: 014676


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420
MTTRIPSHQLSSGLYVSGRPEQLKERQPTMASRAVPYTGGDVKKSGELGKMFDIQVTDQANTKLPSRPSSSSQPNSGSVRSGSNSGPVKKTSGPLPLQPTGLITSGPIGSGPLSNRRSGQLDYSGSGSGSVKAGYGSAVTSLGEDVKVGFRVSRAVAWVVMVVVAMGVMVGAFLMVAVKKAVVLVAVAAVVGPLFIGMIWNCVWGRRGLLGFVKKYPDTELRGAIDGQYVKVTGVVTCGSIPLESSYQRVPRCVYVSTELHEYKGCGGKPANPKHRCFSWGSRHLEKYVSDFYISDFQSGLRALVKAGYGAKVAPFVKPATVVNITKGNRDLSPSFLRWLADRNLSSDDRIMRLKEGYIKEGSTVSVMGVVRRHDNVLMIVPSTEPVSTGCQWSRCLLPTYVEGLILTCDDNQDGDVVPV
cccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccEEEEcccHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEEEccccccccccccccEEEEEccEEEEcccccccccccccccccccccccEEEEEEEEEEcccHHHHHHHHcccccEEEEEEccEEEEEccccccccHHHHHHHHHcccccHHHHHEEcccccccccEEEEEEEEEEcccEEEEEccccccccccccccccccccccEEEEEEccccccccccc
cccccccccccccEEEccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccEcccccccccccccccccccccccccccccccccccEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHcccccccEEEEEEEEEcccccccccccccccEEEEEEEEEEEcccccccccccccccEEcccHHHHHEEEEEEEccccccEEEEEcccccEEEEEEcccEEEEEccccccccHHHHHHHHHccccccccEEEEEccEEEcccEEEEEEEEEEcccEEEEEccccccccccHHHHEEccccEcEEEEEEcccccccEEcc
mttripshqlssglyvsgrpeqlkerqptmasravpytggdvkksgelgkmfdIQVTdqantklpsrpssssqpnsgsvrsgsnsgpvkktsgplplqptglitsgpigsgplsnrrsgqldysgsgsgsvkagygsavtslgedvkvGFRVSRAVAWVVMVVVAMGVMVGAFLMVAVKKAVVLVAVAAVVGPLFIGMIWNCvwgrrgllgfvkkypdtelrgaidgqyVKVTGVVtcgsiplessyqrvprcvyvstelheykgcggkpanpkhrcfswgsrhlekyvsdfYISDFQSGLRALVKAgygakvapfvkpatvvnitkgnrdlspSFLRWLADRNLSSDDRIMRLKegyikegstvSVMGVVrrhdnvlmivpstepvstgcqwsrcllptyVEGLIltcddnqdgdvvpv
mttripshqlssglyvsgrpeqlkerqptmasravpytggdvkksgelGKMFDIQVTDQantklpsrpssssqpnsgsvrsgsnsgpvkktsgplplqptGLITSGPIGSGPLSNRRSGQLDYSGSGSGSVKAGYGSAVTSLGEDVKVGFRVSRAVAWVVMVVVAMGVMVGAFLMVAVKKAVVLVAVAAVVGPLFIGMIWNCVWGRRGLLGFVKKYPDTElrgaidgqyvKVTGVVTCgsiplessyqrvPRCVYVSTELHEykgcggkpanpKHRCFSWGSRHLEKYVSDFYISDFQSGLRALVKAGYGAkvapfvkpatvvnitkgnrdlspsflrWLADRNLSSDDRIMRLKegyikegstvsvMGVVRRHDNVLMIVPstepvstgcqwSRCLLPTYVEGLILtcddnqdgdvvpv
MTTRIPSHQLSSGLYVSGRPEQLKERQPTMASRAVPYTGGDVKKSGELGKMFDIQVTDQANTKLpsrpssssqpnsgsvrsgsnsgpvKKTSGPLPLQPTGLITSGPIGSGPLSNRRSGQLDYSGSGSGSVKAGYGSAVTSLGEDVKVGFRVSRavawvvmvvvamgvmvgaflmvavkkavvlvavaavvGPLFIGMIWNCVWGRRGLLGFVKKYPDTELRGAIDGQYVKVTGVVTCGSIPLESSYQRVPRCVYVSTELHEYKGCGGKPANPKHRCFSWGSRHLEKYVSDFYISDFQSGLRALVKAGYGAKVAPFVKPATVVNITKGNRDLSPSFLRWLADRNLSSDDRIMRLKEGYIKEGSTVSVMGVVRRHDNVLMIVPSTEPVSTGCQWSRCLLPTYVEGLILTCDDNQDGDVVPV
******************************************************************************************************************************************VTSLGEDVKVGFRVSRAVAWVVMVVVAMGVMVGAFLMVAVKKAVVLVAVAAVVGPLFIGMIWNCVWGRRGLLGFVKKYPDTELRGAIDGQYVKVTGVVTCGSIPLESSYQRVPRCVYVSTELHEYKGCGGKPANPKHRCFSWGSRHLEKYVSDFYISDFQSGLRALVKAGYGAKVAPFVKPATVVNITKGNRDLSPSFLRWLADRNLSSDDRIMRLKEGYIKEGSTVSVMGVVRRHDNVLMIVPSTEPVSTGCQWSRCLLPTYVEGLILTCD**********
*********************************************************************************************************************************************LGEDVKVGFRVSRAVAWVVMVVVAMGVMVGAFLMVAVKKAVVLVAVAAVVGPLFIGMIWNCVWGRRGLLGFVKKYPDTELRGAIDGQYVKVTGVVTCGSIPLESSYQRVPRCVYVSTELHEYKGCGGKPANPKHRCFSWGSRHLEKYVSDFYISDFQSGLRALVKAGYGAKVAPFVKPATVVNITK***D*SPSFLRWLADRNLSSDDRIMRLKEGYIKEGSTVSVMGVVRRHDNVLMIVPSTEPVSTGCQWSRCLLPTYVEGLILTCDDNQ***VVPV
MTTRIPSHQLSSGLYVSGRP***********SRAVPYTGGDVKKSGELGKMFDIQVTDQA*********************************PLPLQPTGLITSGPIGSGPLSNRR*****************YGSAVTSLGEDVKVGFRVSRAVAWVVMVVVAMGVMVGAFLMVAVKKAVVLVAVAAVVGPLFIGMIWNCVWGRRGLLGFVKKYPDTELRGAIDGQYVKVTGVVTCGSIPLESSYQRVPRCVYVSTELHEYKGCGGKPANPKHRCFSWGSRHLEKYVSDFYISDFQSGLRALVKAGYGAKVAPFVKPATVVNITKGNRDLSPSFLRWLADRNLSSDDRIMRLKEGYIKEGSTVSVMGVVRRHDNVLMIVPSTEPVSTGCQWSRCLLPTYVEGLILTCDDNQDGDVVPV
*****************************************VKKSGELGK*FDIQ**************************************PLPLQPTGLITS*************************************GEDVKVGFRVSRAVAWVVMVVVAMGVMVGAFLMVAVKKAVVLVAVAAVVGPLFIGMIWNCVWGRRGLLGFVKKYPDTELRGAIDGQYVKVTGVVTCGSIPLESSYQRVPRCVYVSTELHEYKGCGGKPANPKHRCFSWGSRHLEKYVSDFYISDFQSGLRALVKAGYGAKVAPFVKPATVVNITKGNRDLSPSFLRWLADRNLSSDDRIMRLKEGYIKEGSTVSVMGVVRRHDNVLMIVPSTEPVSTGCQWSRCLLPTYVEGLILTCDDNQDGDVVPV
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MTTRIPSHQLSSGLYVSGRPEQLKERQPTMASRAVPYTGGDVKKSGELGKMFDIQVTDQANTKLPSRPSSSSQPNSGSVRSGSNSGPVKKTSGPLPLQPTGLITSGPIGSGPLSNRRSGQLDYSGSGSGSVKAGYGSAVTSLGEDVKVGFRVSRAVAWVVMVVVAMGVMVGAFLMVAVKKAVVLVAVAAVVGPLFIGMIWNCVWGRRGLLGFVKKYPDTELRGAIDGQYVKVTGVVTCGSIPLESSYQRVPRCVYVSTELHEYKGCGGKPANPKHRCFSWGSRHLEKYVSDFYISDFQSGLRALVKAGYGAKVAPFVKPATVVNITKGNRDLSPSFLRWLADRNLSSDDRIMRLKEGYIKEGSTVSVMGVVRRHDNVLMIVPSTEPVSTGCQWSRCLLPTYVEGLILTCDDNQDGDVVPV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query420 2.2.26 [Sep-21-2011]
Q9FZ45474 Uncharacterized membrane no no 0.992 0.879 0.519 1e-124
>sp|Q9FZ45|Y1686_ARATH Uncharacterized membrane protein At1g16860 OS=Arabidopsis thaliana GN=At1g16860 PE=1 SV=1 Back     alignment and function desciption
 Score =  446 bits (1146), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 248/477 (51%), Positives = 316/477 (66%), Gaps = 60/477 (12%)

Query: 1   MTTRIPSHQLSSGLYVSGRPEQLKERQPTMASRAVPYTGGDVKKSGELGKMFDIQVTDQA 60
           M +R PSHQLS+GL+VSGRPEQ KER PTM++ A+PYTGGD+K+SGELGKMFDI      
Sbjct: 1   MGSRYPSHQLSNGLFVSGRPEQPKERAPTMSAVAMPYTGGDIKRSGELGKMFDIPADGTK 60

Query: 61  NTK---LPSRPSSS--------SQPN--------SGSVRSG-------SNSGPV------ 88
           + K   +P  PS S        S P         SGS+ S        +NSGP+      
Sbjct: 61  SRKSGPIPGAPSRSGSFAGTAQSGPGAPMATGRMSGSLASAGSVSMKKTNSGPLSKHGEP 120

Query: 89  -KKTSGP------------LPLQP-TGLITSGPIGSGPLSN-----RRSGQLDYSG-SGS 128
            KK+SGP            +P+ P TGLITSGPI SGPL++     + SG LD SG   S
Sbjct: 121 LKKSSGPQSGGVTRQNSGSIPILPATGLITSGPITSGPLNSSGAPRKVSGPLDSSGLMKS 180

Query: 129 GSVKAGYGSAVTSLG--EDVKVGFRVSRAVAWVVMVVVAMGVMVGAFLMVAVKKAVVLVA 186
                 +  AVT+LG  +D        + V W+V+++  MG + G F++ AV   ++LV 
Sbjct: 181 HMPTVVHNQAVTTLGPEDDFSCLKSFPKPVLWLVVLIFIMGFLAGGFILGAVHNPILLVV 240

Query: 187 VA---AVVGPLFIGMIWNCVWGRRGLLGFVKKYPDTELRGAIDGQYVKVTGVVTCGSIPL 243
           VA    VV  LFI   WN  WGRRG+  F+ +YPD +LR A +GQ+VKVTGVVTCG++PL
Sbjct: 241 VAILFTVVAALFI---WNICWGRRGITDFIARYPDADLRTAKNGQHVKVTGVVTCGNVPL 297

Query: 244 ESSYQRVPRCVYVSTELHEYKGCGGKPANPKHRCFSWGSRHLEKYVSDFYISDFQSGLRA 303
           ESS+ RVPRCVY ST L+EY+G G KPAN  HR F+WG R  E++V DFYISDFQSGLRA
Sbjct: 298 ESSFHRVPRCVYTSTCLYEYRGWGSKPANSSHRHFTWGLRSSERHVVDFYISDFQSGLRA 357

Query: 304 LVKAGYGAKVAPFVKPATVVNITKGNRDLSPSFLRWLADRNLSSDDRIMRLKEGYIKEGS 363
           LVK G GAKV P V  + V++  +G+  +SP F+RWL  +NL+SDDRIMRLKEGYIKEGS
Sbjct: 358 LVKTGSGAKVTPLVDDSVVIDFKQGSEQVSPDFVRWLGKKNLTSDDRIMRLKEGYIKEGS 417

Query: 364 TVSVMGVVRRHDNVLMIVPSTEPVSTGCQWSRCLLPTYVEGLILTCDDNQDGDVVPV 420
           TVSV+GVV+R+DNVLMIVPS+EP++ G QW RC  PT +EG++L C+D+ + D +PV
Sbjct: 418 TVSVIGVVQRNDNVLMIVPSSEPLAAGWQWRRCTFPTSLEGIVLRCEDSSNVDAIPV 474





Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query420
255554737430 conserved hypothetical protein [Ricinus 1.0 0.976 0.795 0.0
356555714417 PREDICTED: uncharacterized membrane prot 0.961 0.968 0.748 1e-173
356532329420 PREDICTED: uncharacterized membrane prot 0.964 0.964 0.735 1e-171
449434004439 PREDICTED: uncharacterized membrane prot 0.992 0.949 0.710 1e-171
449530390435 PREDICTED: uncharacterized membrane prot 0.983 0.949 0.712 1e-170
357447785428 Membrane protein, putative [Medicago tru 0.983 0.964 0.731 1e-170
224116050425 predicted protein [Populus trichocarpa] 0.990 0.978 0.755 1e-170
297799788445 ubiquitin thiolesterase [Arabidopsis lyr 1.0 0.943 0.687 1e-166
145341413445 ubiquitin-specific protease C19-related 1.0 0.943 0.685 1e-166
224118172425 predicted protein [Populus trichocarpa] 0.990 0.978 0.752 1e-165
>gi|255554737|ref|XP_002518406.1| conserved hypothetical protein [Ricinus communis] gi|223542251|gb|EEF43793.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  652 bits (1683), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/430 (79%), Positives = 381/430 (88%), Gaps = 10/430 (2%)

Query: 1   MTTRIPSHQLSSGLYVSGRPE-QLKERQPTMASRAVPYTGGDVKKSGELGKMFDIQV--- 56
           M+TRI SHQL +GL VSGRP+ QLKE+ PTMASR+VPYTGGD+KKSGELGKMFDI V   
Sbjct: 1   MSTRIQSHQLKNGLLVSGRPDHQLKEKPPTMASRSVPYTGGDIKKSGELGKMFDIPVLLD 60

Query: 57  --TDQANTKLPSRPSSSSQPNSGSVRSGSNSGPVKKTSGPLPLQPTGLITSGPIGSGPL- 113
             +     K PSRPSSSSQ NSGSVRSG NSGP KK+SGP+PLQPTGLITSGP+GSGPL 
Sbjct: 61  QPSPPPIPKQPSRPSSSSQHNSGSVRSGPNSGPFKKSSGPMPLQPTGLITSGPLGSGPLP 120

Query: 114 -SNRRSGQLDY--SGSGSGSVKAGYGSAVTSLGEDVKVGFRVSRAVAWVVMVVVAMGVMV 170
            ++RRSGQLD+  SG GS S KA YGSAVTS  EDVKVGFRVSR V WVV+VV+AMG++V
Sbjct: 121 PAHRRSGQLDHTASGVGSASSKALYGSAVTSFTEDVKVGFRVSRPVFWVVLVVIAMGLLV 180

Query: 171 GAFLMVAVKKAVVLVAVAAVVGPLFIGMIWNCVWGRRGLLGFVKKYPDTELRGAIDGQYV 230
           GAFLMVAVKKA++LVAV A++ P+ +G++WNCVWGRRGLLGFV++YPDTELRGAIDGQYV
Sbjct: 181 GAFLMVAVKKAIILVAVGAILVPVVVGLVWNCVWGRRGLLGFVRRYPDTELRGAIDGQYV 240

Query: 231 KVTGVVTCGSIPLESSYQRVPRCVYVSTELHEYKGCGGKPANPKHRCFSWGSRHLEKYVS 290
           KVTGVVTCGSIPLE+SYQRV RCVYVSTEL+EY+G GGK A+ KHR FSWGSR+ EKYV+
Sbjct: 241 KVTGVVTCGSIPLETSYQRVSRCVYVSTELYEYRGWGGKSAHAKHRFFSWGSRYSEKYVA 300

Query: 291 DFYISDFQSGLRALVKAGYGAKVAPFVKPATVVNITKGNRDLSPSFLRWLADRNLSSDDR 350
           DFYISDFQSGLRALVKAGYGAKVAPFVKP+TVV++   NRDLSPSFLRWLADR+LSSDDR
Sbjct: 301 DFYISDFQSGLRALVKAGYGAKVAPFVKPSTVVDVKNENRDLSPSFLRWLADRSLSSDDR 360

Query: 351 IMRLKEGYIKEGSTVSVMGVVRRHDNVLMIVPSTEPVSTGCQWSRCLLPTYVEGLILTCD 410
           IMRLKEGYIKEGSTVSVMGVVRRHDNVLMIVP  EPVSTGCQW +CLLPTYVEGL+LTCD
Sbjct: 361 IMRLKEGYIKEGSTVSVMGVVRRHDNVLMIVPPPEPVSTGCQWFQCLLPTYVEGLVLTCD 420

Query: 411 DNQDGDVVPV 420
           D QD DVVPV
Sbjct: 421 DTQDADVVPV 430




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555714|ref|XP_003546175.1| PREDICTED: uncharacterized membrane protein At1g16860-like [Glycine max] Back     alignment and taxonomy information
>gi|356532329|ref|XP_003534726.1| PREDICTED: uncharacterized membrane protein At1g16860-like [Glycine max] Back     alignment and taxonomy information
>gi|449434004|ref|XP_004134786.1| PREDICTED: uncharacterized membrane protein At1g16860-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449530390|ref|XP_004172178.1| PREDICTED: uncharacterized membrane protein At1g16860-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|357447785|ref|XP_003594168.1| Membrane protein, putative [Medicago truncatula] gi|355483216|gb|AES64419.1| Membrane protein, putative [Medicago truncatula] Back     alignment and taxonomy information
>gi|224116050|ref|XP_002317194.1| predicted protein [Populus trichocarpa] gi|222860259|gb|EEE97806.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297799788|ref|XP_002867778.1| ubiquitin thiolesterase [Arabidopsis lyrata subsp. lyrata] gi|297313614|gb|EFH44037.1| ubiquitin thiolesterase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|145341413|ref|NP_193960.2| ubiquitin-specific protease C19-related protein [Arabidopsis thaliana] gi|22655310|gb|AAM98245.1| unknown protein [Arabidopsis thaliana] gi|30387541|gb|AAP31936.1| At4g22290 [Arabidopsis thaliana] gi|332659188|gb|AEE84588.1| ubiquitin-specific protease C19-related protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224118172|ref|XP_002331575.1| predicted protein [Populus trichocarpa] gi|222873799|gb|EEF10930.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query420
TAIR|locus:2132075445 AT4G22290 "AT4G22290" [Arabido 0.790 0.746 0.673 1.4e-119
TAIR|locus:2015646474 AT1G16860 [Arabidopsis thalian 0.528 0.468 0.639 4.6e-101
TAIR|locus:2037533468 AT1G78880 "AT1G78880" [Arabido 0.528 0.474 0.630 2e-98
TAIR|locus:2132075 AT4G22290 "AT4G22290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1177 (419.4 bits), Expect = 1.4e-119, P = 1.4e-119
 Identities = 227/337 (67%), Positives = 258/337 (76%)

Query:    89 KKTSGPLP-LQPTGLITSGPIGS-GPL--SNRRSGQLDYSGSGSGSVKAGYGSAVTSLGE 144
             KK SGPL  LQPTGLITSG +GS GP+   +RRSGQLD+  S   S K  YGS+VTSL  
Sbjct:   109 KKFSGPLSQLQPTGLITSGSLGSSGPILSGSRRSGQLDHQLSNLASSKPKYGSSVTSLNV 168

Query:   145 D-VKVGFRVSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPLFIGMIWNCV 203
             D V+VGF+V +                                      P  + ++WNCV
Sbjct:   169 DPVRVGFKVPKAMVWAVLIVAAMGLLVGAFLTVAVKKPVVIAAVLAAVCPAIVVLVWNCV 228

Query:   204 WGRRGLLGFVKKYPDTELRGAIDGQYVKVTGVVTCGSIPLESSYQRVPRCVYVSTELHEY 263
             W R+GLL F+KKYPD ELRGAIDGQ+VKVTGVVTCGSIPLESS+QR PRCVYVSTEL+EY
Sbjct:   229 WRRKGLLSFIKKYPDAELRGAIDGQFVKVTGVVTCGSIPLESSFQRTPRCVYVSTELYEY 288

Query:   264 KGCGGKPANPKHRCFSWGSRHLEKYVSDFYISDFQSGLRALVKAGYGAKVAPFVKPATVV 323
             KG GGK ANPKHRCFSWGSRH EKYVSDFYISDFQSGLRALVKAGYG+KV+PFVKPATV 
Sbjct:   289 KGFGGKSANPKHRCFSWGSRHAEKYVSDFYISDFQSGLRALVKAGYGSKVSPFVKPATVA 348

Query:   324 NITKGNRDLSPSFLRWLADRNLSSDDRIMRLKEGYIKEGSTVSVMGVVRRHDNVLMIVPS 383
             N+T  N+DLSPSFL+WL+DRNLS+DDR+MRLKEGYIKEGSTVSVMG+VRRHDNVLMIVP 
Sbjct:   349 NVTTQNKDLSPSFLKWLSDRNLSADDRVMRLKEGYIKEGSTVSVMGMVRRHDNVLMIVPP 408

Query:   384 TEPVSTGCQWSRCLLPTYVEGLILTCDDNQDGDVVPV 420
              E VS+GC+W  CL PTY +GLI+TCDDNQ+ DV+PV
Sbjct:   409 AEAVSSGCRWWHCLFPTYADGLIITCDDNQNADVIPV 445


GO:0004221 "ubiquitin thiolesterase activity" evidence=ISS
GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=ISS
TAIR|locus:2015646 AT1G16860 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037533 AT1G78880 "AT1G78880" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00011719001
SubName- Full=Chromosome undetermined scaffold_332, whole genome shotgun sequence; (432 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query420
pfam06070777 pfam06070, Herpes_UL32, Herpesvirus large structur 6e-04
>gnl|CDD|218881 pfam06070, Herpes_UL32, Herpesvirus large structural phosphoprotein UL32 Back     alignment and domain information
 Score = 41.8 bits (98), Expect = 6e-04
 Identities = 25/128 (19%), Positives = 37/128 (28%), Gaps = 6/128 (4%)

Query: 20  PEQLKERQPTMASRAVPYTGGDVKKSGELGKMFDIQ-VTDQANTKLPSRPSSSSQPNSGS 78
           P + +       S A P T G  +    LGK          ANT   +           S
Sbjct: 542 PPKSRRTLIVALSLASPSTAGSPRPKPSLGKFVIGTDPFAFANTVRLTDNMRGGNGVGSS 601

Query: 79  VRSGSNSGPVKKTSGPLPLQPTGLITSGPIGSGPLSNRRSGQLDYSGSGSGSVKAGYGSA 138
           V+   ++     T     L+P  L    P  S   + R +G        SG      G  
Sbjct: 602 VKPKGSASSKPLTGPGSDLKPATLNGKTPSSSLVGAARNAGASSKVKIPSGL-----GGF 656

Query: 139 VTSLGEDV 146
            + +    
Sbjct: 657 TSPISLLE 664


The large phosphorylated protein (UL32-like) of herpes viruses is the polypeptide most frequently reactive in immuno-blotting analyses with antisera when compared with other viral proteins. Length = 777

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 420
PF12483160 GIDE: E3 Ubiquitin ligase; InterPro: IPR022170 Thi 97.86
PF13567176 DUF4131: Domain of unknown function (DUF4131) 91.73
PF13829224 DUF4191: Domain of unknown function (DUF4191) 90.58
>PF12483 GIDE: E3 Ubiquitin ligase; InterPro: IPR022170 This domain family is found in bacteria, archaea and eukaryotes, and is typically between 150 and 163 amino acids in length Back     alignment and domain information
Probab=97.86  E-value=0.00013  Score=64.76  Aligned_cols=102  Identities=20%  Similarity=0.267  Sum_probs=68.6

Q ss_pred             ccccceeeeeEeeceEEEecCCceeEEE-EecCCCeeeeeeeeceEEeecCCCCCCCHHHHHHHhhcC-CCCccceeEEe
Q 014676          278 FSWGSRHLEKYVSDFYISDFQSGLRALV-KAGYGAKVAPFVKPATVVNITKGNRDLSPSFLRWLADRN-LSSDDRIMRLK  355 (420)
Q Consensus       278 f~W~l~~~E~~~~DFYIsD~~sG~RAlV-KaG~G~kVtp~V~e~~vv~~~~~~~dlS~~f~~WL~erN-LSsd~r~mRlk  355 (420)
                      -.|++.+..+..+.||+.|  ..-|.+| ....|+.+.--.+-+.....   .......+..|+..+- +.  .+-.||+
T Consensus        17 ~~~~~v~~~~~~vPF~L~D--~tg~v~V~~~p~~a~l~l~~v~~~f~p~---~~~~~~~~~~~~~~~~~~~--~~G~r~~   89 (160)
T PF12483_consen   17 SSWRTVSSGTSEVPFYLED--GTGRVRVVDDPEGAELDLETVYDRFEPS---PSSPPDGLFGFFSGERELE--PKGYRYT   89 (160)
T ss_pred             ccEEEEEcceeEcCEEEEC--CceEEEEecCcccCccceeeEEEEeEEC---CCCccceeeeeeccceecc--ccccEEE
Confidence            3499999999999999999  4455555 56667665432333332111   1133444444433322 11  3347999


Q ss_pred             cceeeeCCEEEEEEEE-EeeCceeEEeCCCCc
Q 014676          356 EGYIKEGSTVSVMGVV-RRHDNVLMIVPSTEP  386 (420)
Q Consensus       356 EGyIkEGstvSVmGvv-kr~~~~~mi~pP~e~  386 (420)
                      |-.|.+|++|.|+|.+ ..+|..++|-+|.+.
T Consensus        90 E~~L~~G~~ltvvGe~~~~~~g~~~i~~p~~g  121 (160)
T PF12483_consen   90 EEILPVGTPLTVVGELVRDGDGNLVIQPPKDG  121 (160)
T ss_pred             EEEcCCCCEEEEEEEEEEcCCCcEEEeCCCCC
Confidence            9999999999999999 555678999999986



There is a single completely conserved residue E that may be functionally important. GIDE is an E3 ubiquitin ligase which is involved in inducing apoptosis. ; GO: 0016881 acid-amino acid ligase activity

>PF13567 DUF4131: Domain of unknown function (DUF4131) Back     alignment and domain information
>PF13829 DUF4191: Domain of unknown function (DUF4191) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00