Citrus Sinensis ID: 014678


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420
MEPPKGFLASLWSFICFLPYFIGLLLLGIIKGIIFCPVICLMMTIGNSAIILGLLPAHVLWTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVGEGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRLLYIPGAIIAGGLGVLIDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAGLAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDILDMPEGSCFPRPQYRKKADLSRTSTFSRPSSFKDPPSRTSSLRKPIDLKPLELLERLFKECQRHGEIWVSEGLITAKDIEDAKSNSGSQVVSIGLPAYCLLQALLRSAMANSPGILLTLLR
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccEEHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccEEccEEEEEEcccccccccHHHHHHHHHcccccccEEEEEEEcccHHHHHHHHcEEccHHHEEEHHHccccHHHHHcHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEEccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHcccccEEEEcccHHHHHHHHHHHHHcccccEEEEEcc
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHEEEEEccHHHHEEEHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEccccccEcccEEEEEcHHHHHHccHHHHHHHHHHccccccccEEEEEEEccHHHEHEEEEEEEcHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccccEHHEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEHEHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccccEEEEcccHHHHHHHHHHHHHHcccccEEEEccc
meppkgflASLWSFICFLPYFIGLLLLGIIKGIIFCPVICLMMTIGNSAIILGLLPAHVLWTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIiggalygflspifatfdavgegktndifhcfydgtwstikhsfTIVRDFKDVCFHSYFSLMDDlrqkqapdgkyYEIRLLYIpgaiiagglgvliDVPVISVVALCKSPYMLFKGWHRLFHDLigregpfleTICVPLAGLAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYdeysndildmpegscfprpqyrkkadlsrtstfsrpssfkdppsrtsslrkpidlkpLELLERLFKECQRHGEIWVSEGLItakdiedaksnsgsqvvsiGLPAYCLLQALLRSAMANSPGILLTLLR
MEPPKGFLASLWSFICFLPYFIGLLLLGIIKGIIFCPVICLMMTIGNSAIILGLLPAHVLWTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVGEGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRLLYIPGAIIAGGLGVLIDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAGLAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDILDMPEGSCFPRPQYRKKadlsrtstfsrpssfkdppsrtsslrkpidlkpLELLERLFKECQRHGEIWVSEGLITAKDIEDAKSNSGSQVVSIGLPAYCLLQALLRSAMANSPGILLTLLR
MEPPKGFLASLWSFICFLPYFigllllgiikgiiFCPVICLMMTIGNSAIILGLLPAHVLWTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVGEGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRllyipgaiiagglgvliDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAGLAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDILDMPEGSCFPRPQYRKKADLsrtstfsrpssfKDPPSRTSSLRKPIDLKPLELLERLFKECQRHGEIWVSEGLITAKDIEDAKSNSGSQVVSIGLPAYCLLQALLRSAMANSPGILLTLLR
******FLASLWSFICFLPYFIGLLLLGIIKGIIFCPVICLMMTIGNSAIILGLLPAHVLWTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVGEGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRLLYIPGAIIAGGLGVLIDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAGLAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDILDMP*******************************************LKPLELLERLFKECQRHGEIWVSEGLITAKDIE*******SQVVSIGLPAYCLLQALLRSAMANSPGILLT***
***PKGFLASLWSFICFLPYFIGLLLLGIIKGIIFCPVICLMMTIGNSAIILGLLPAHVLWTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVGEGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDL*********YYEIRLLYIPGAIIAGGLGVLIDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAGLAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDILDMPEGSCFP***************************************PLELLERLFKECQRHGEIWVSEGLITAKDIEDAKSNSGSQVVSIGLPAYCLLQALLRSAMANSPGILLTLLR
MEPPKGFLASLWSFICFLPYFIGLLLLGIIKGIIFCPVICLMMTIGNSAIILGLLPAHVLWTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVGEGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRLLYIPGAIIAGGLGVLIDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAGLAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDILDMPEGSCFPRPQYR**************************LRKPIDLKPLELLERLFKECQRHGEIWVSEGLITAKDIEDAKSNSGSQVVSIGLPAYCLLQALLRSAMANSPGILLTLLR
*EPPKGFLASLWSFICFLPYFIGLLLLGIIKGIIFCPVICLMMTIGNSAIILGLLPAHVLWTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVGEGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRLLYIPGAIIAGGLGVLIDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAGLAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDILDMPEGSCFPRPQYR*************************SLRKPIDLKPLELLERLFKECQRHGEIWVSEGLITAKDIEDAKSNSGSQVVSIGLPAYCLLQALLRSAMANSPGILLTLLR
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEPPKGFLASLWSFICFLPYFIGLLLLGIIKGIIFCPVICLMMTIGNSAIILGLLPAHVLWTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVGEGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRLLYIPGAIIAGGLGVLIDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAGLAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDILDMPEGSCFPRPQYRKKADLSRTSTFSRPSSFKDPPSRTSSLRKPIDLKPLELLERLFKECQRHGEIWVSEGLITAKDIEDAKSNSGSQVVSIGLPAYCLLQALLRSAMANSPGILLTLLR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query420 2.2.26 [Sep-21-2011]
Q8GUM4 588 Uncharacterized membrane no no 0.985 0.704 0.671 1e-168
>sp|Q8GUM4|Y3739_ARATH Uncharacterized membrane protein At3g27390 OS=Arabidopsis thaliana GN=At3g27390 PE=1 SV=2 Back     alignment and function desciption
 Score =  593 bits (1528), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 284/423 (67%), Positives = 352/423 (83%), Gaps = 9/423 (2%)

Query: 1   MEPPKGFLASLWSFICFLPYFIGLLLLGIIKGIIFCPVICLMMTIGNSAIILGLLPAHVL 60
           MEPP GF ASL+ F+ FLPYFIGLL LG IKGI+ CP++CL++TIGNSA+IL LLP H++
Sbjct: 1   MEPPIGFRASLFQFLLFLPYFIGLLFLGFIKGIVLCPLVCLVVTIGNSAVILSLLPVHIV 60

Query: 61  WTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVG 120
           WT+Y I+ AKQ+GP+LK+  C+C+P  +ILWP+V I  S++GGALYGF SPIFATFDAVG
Sbjct: 61  WTFYSIVSAKQVGPILKIFLCLCLPAAIILWPIVGILGSVLGGALYGFFSPIFATFDAVG 120

Query: 121 EGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRLL 180
           EGK    FHCFYDGTWST++ SFT+VRDFKDVCFHSYFSLMD+L+Q   PD KYYEIRLL
Sbjct: 121 EGKPYQFFHCFYDGTWSTMQRSFTVVRDFKDVCFHSYFSLMDELKQ-SCPDRKYYEIRLL 179

Query: 181 YIPGAIIAGGLGVLIDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAG 240
            +PGA++   LG+L+D PVIS+VA+CKSPYMLFKGWHRLFHDLIGREGPFLET+CVP+AG
Sbjct: 180 QLPGALVVSVLGILVDPPVISLVAICKSPYMLFKGWHRLFHDLIGREGPFLETMCVPIAG 239

Query: 241 LAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDIL 300
           LAI+LWPLAV GAV+GS+++SIFLGAYAGVV YQESS ++GL YI+A++SIYDEYS DIL
Sbjct: 240 LAILLWPLAVTGAVIGSVISSIFLGAYAGVVSYQESSFYYGLCYIVASVSIYDEYSTDIL 299

Query: 301 DMPEGSCFPRPQYRKKADLSRTSTFSRP----SSFKDPPS-RTSSLRKP-IDLKPLELLE 354
           D+PEGSCFPRP+YR+K +    + FS P     S K+  S R  S+R P ID+KPL+LL 
Sbjct: 300 DLPEGSCFPRPKYRRKDE--EPTPFSGPVPRLGSVKNASSMRGGSVRVPMIDIKPLDLLN 357

Query: 355 RLFKECQRHGEIWVSEGLITAKDIEDAKSNSGSQVVSIGLPAYCLLQALLRSAMANSPGI 414
            LF EC+R+GE+  ++GLI +KDIE+A+S+ GSQV+S+GLPAY LL  +LRS  ANS G+
Sbjct: 358 ELFVECRRYGEVLATKGLINSKDIEEARSSKGSQVISVGLPAYGLLYEILRSVKANSSGL 417

Query: 415 LLT 417
           LL+
Sbjct: 418 LLS 420





Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query420
224055641 586 predicted protein [Populus trichocarpa] 0.988 0.708 0.729 1e-179
255572012 582 conserved hypothetical protein [Ricinus 0.985 0.711 0.738 1e-178
297805610 586 hypothetical protein ARALYDRAFT_493918 [ 0.988 0.708 0.721 1e-176
30693640 586 uncharacterized protein [Arabidopsis tha 0.988 0.708 0.704 1e-173
9758091 595 unnamed protein product [Arabidopsis tha 0.988 0.697 0.687 1e-170
30688768 588 uncharacterized protein [Arabidopsis tha 0.985 0.704 0.671 1e-167
27311557 588 Unknown protein [Arabidopsis thaliana] 0.985 0.704 0.671 1e-167
449455894 589 PREDICTED: uncharacterized membrane prot 0.992 0.707 0.689 1e-166
356571451 580 PREDICTED: uncharacterized membrane prot 0.992 0.718 0.688 1e-166
449492897 589 PREDICTED: uncharacterized membrane prot 0.992 0.707 0.687 1e-165
>gi|224055641|ref|XP_002298580.1| predicted protein [Populus trichocarpa] gi|222845838|gb|EEE83385.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  634 bits (1636), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 308/422 (72%), Positives = 361/422 (85%), Gaps = 7/422 (1%)

Query: 1   MEPPKGFLASLWSFICFLPYFIGLLLLGIIKGIIFCPVICLMMTIGNSAIILGLLPAHVL 60
           MEPPK  L+SLW+FI FLP+F GLL+LG +KG++FCP++CL+MTIGNSAIILGL P H++
Sbjct: 1   MEPPKEILSSLWNFIIFLPFFFGLLVLGTVKGVVFCPLVCLIMTIGNSAIILGLWPLHIV 60

Query: 61  WTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVG 120
            TYY ILR K +GPVLK++ CIC+P  LILW V+ I  SIIGGALYG LSPIFATFDAVG
Sbjct: 61  KTYYSILRTKHIGPVLKIVLCICLPATLILWLVLGIVGSIIGGALYGLLSPIFATFDAVG 120

Query: 121 EGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRLL 180
           E KTN ++HCFYDGTW T+K SFT+VRDF DVC+HSYFSL+DDLRQ  APD KYYEIRLL
Sbjct: 121 ERKTNMLYHCFYDGTWDTVKGSFTVVRDFGDVCYHSYFSLLDDLRQG-APDVKYYEIRLL 179

Query: 181 YIPGAIIAGGLGVLIDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAG 240
            +PGAIIA  LG++ D P++S++A+CKSPYMLFKGWHRLFHDLIGREGPFLETICVP AG
Sbjct: 180 PLPGAIIAASLGIVFDFPLVSLIAICKSPYMLFKGWHRLFHDLIGREGPFLETICVPFAG 239

Query: 241 LAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDIL 300
           LAI+LWPLAVVGAVLGSMV+SIFLGAYAGVVVYQE S WFGL YI+A+L+IYDEYSNDIL
Sbjct: 240 LAILLWPLAVVGAVLGSMVSSIFLGAYAGVVVYQE-SFWFGLCYIVASLAIYDEYSNDIL 298

Query: 301 DMPEGSCFPRPQYRKKADL----SRTSTFSRPSSFKDPPSRTSSLRKP-IDLKPLELLER 355
           DMPEGSCFPRP+Y+K   L    SR ++FS  +S ++P SR  S   P +DLKPLELL+R
Sbjct: 299 DMPEGSCFPRPKYQKDPKLTKTTSRAASFSGSTSVRNPLSRGGSFNHPMVDLKPLELLDR 358

Query: 356 LFKECQRHGEIWVSEGLITAKDIEDAKSNSGSQVVSIGLPAYCLLQALLRSAMANSPGIL 415
           +FKECQ HGEI+VSEGLIT +DI+DAKS  GS+V+SIGLPAYC+LQALLRS  ANS GIL
Sbjct: 359 IFKECQHHGEIFVSEGLITQQDIDDAKSGKGSRVISIGLPAYCILQALLRSVKANSVGIL 418

Query: 416 LT 417
           L+
Sbjct: 419 LS 420




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572012|ref|XP_002526947.1| conserved hypothetical protein [Ricinus communis] gi|223533699|gb|EEF35434.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|297805610|ref|XP_002870689.1| hypothetical protein ARALYDRAFT_493918 [Arabidopsis lyrata subsp. lyrata] gi|297316525|gb|EFH46948.1| hypothetical protein ARALYDRAFT_493918 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|30693640|ref|NP_198880.2| uncharacterized protein [Arabidopsis thaliana] gi|28393245|gb|AAO42051.1| unknown protein [Arabidopsis thaliana] gi|28827666|gb|AAO50677.1| unknown protein [Arabidopsis thaliana] gi|332007193|gb|AED94576.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|9758091|dbj|BAB08535.1| unnamed protein product [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|30688768|ref|NP_189375.2| uncharacterized protein [Arabidopsis thaliana] gi|332278120|sp|Q8GUM4.2|Y3739_ARATH RecName: Full=Uncharacterized membrane protein At3g27390 gi|332643790|gb|AEE77311.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|27311557|gb|AAO00744.1| Unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449455894|ref|XP_004145685.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356571451|ref|XP_003553890.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Glycine max] Back     alignment and taxonomy information
>gi|449492897|ref|XP_004159134.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query420
TAIR|locus:2168803 586 AT5G40640 [Arabidopsis thalian 0.988 0.708 0.645 7.3e-146
TAIR|locus:2086726 588 AT3G27390 "AT3G27390" [Arabido 0.990 0.707 0.622 4.6e-144
TAIR|locus:2135748 575 AT4G12680 "AT4G12680" [Arabido 0.992 0.725 0.470 6e-103
TAIR|locus:2114960 569 AT4G37030 "AT4G37030" [Arabido 0.659 0.486 0.401 2e-67
TAIR|locus:2168803 AT5G40640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1425 (506.7 bits), Expect = 7.3e-146, P = 7.3e-146
 Identities = 271/420 (64%), Positives = 316/420 (75%)

Query:     1 MEPPKGFLASLWSFICFLPYFXXXXXXXXXXXXXFCPVICLMMTIGNSAIILGLLPAHVL 60
             MEPP G LASLW FI F+PYF              CP+ICL + IGNSAIILGLLP H +
Sbjct:     1 MEPPTGILASLWQFILFIPYFTGLLLLGVIKGIVLCPLICLTVAIGNSAIILGLLPVHAI 60

Query:    61 WTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVG 120
             WT Y I  AKQLGP+LK+  C+C+P+ +ILW VVSI  S++GGA+YGFLSPIFATFDAVG
Sbjct:    61 WTLYSIASAKQLGPILKIFLCLCVPLGVILWLVVSILGSVLGGAIYGFLSPIFATFDAVG 120

Query:   121 EGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRXX 180
             EGK+N  FHCFYDGTWST++ SFT+V DFKDVCFHSYFS MDDLR   A +  YYEIR  
Sbjct:   121 EGKSNPFFHCFYDGTWSTVQGSFTVVCDFKDVCFHSYFSFMDDLRTSTA-NRHYYEIRLL 179

Query:   181 XXXXXXXXXXXXXXXDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAG 240
                            D PVIS++ALCKSPYMLFKGWHRLFHDLIGREGPFLET+CVP+AG
Sbjct:   180 QIPGAVIVAVLGILVDFPVISLLALCKSPYMLFKGWHRLFHDLIGREGPFLETMCVPIAG 239

Query:   241 LAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDIL 300
             L I+LWPLAVVGAVLGS+V+S+FLGAY GVV YQESS +FGL Y++A++SIYDEYSND+L
Sbjct:   240 LVILLWPLAVVGAVLGSVVSSVFLGAYGGVVSYQESSFFFGLCYVVASVSIYDEYSNDVL 299

Query:   301 DMPEGSCFPRPQYRKK---ADLXXXXXXXXXXXXKDPPSRTSSLRKP-IDLKPLELLERL 356
             DMPEGSCFPRP YR+    A              K  PSR  S + P IDLKPL+LLE L
Sbjct:   300 DMPEGSCFPRPIYRRNEEGASTAFSGGLSRPNSFKTTPSRGGSNKGPMIDLKPLDLLEAL 359

Query:   357 FKECQRHGEIWVSEGLITAKDIEDAKSNSGSQVVSIGLPAYCLLQALLRSAMANSPGILL 416
             F EC+RHGEI V++G+I +KDIE+AKS+ GSQV+S GLPAY LL  LLRS  +NS G+LL
Sbjct:   360 FVECRRHGEIMVTKGIINSKDIEEAKSSKGSQVISFGLPAYSLLHELLRSIKSNSTGLLL 419




GO:0009507 "chloroplast" evidence=ISM
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2086726 AT3G27390 "AT3G27390" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135748 AT4G12680 "AT4G12680" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2114960 AT4G37030 "AT4G37030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
fgenesh4_pg.C_LG_I002235
hypothetical protein (586 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00