Citrus Sinensis ID: 014684

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420
MVRKNLFGPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDLAMPLMLSWVLGGNSSKLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIGTPPNNNSERKEAGEILQAV
cccccccccccccccccEEEEEEEEccccccccccEEEEEEcccEEEEEEccccEEEEEEEEEccccccccccccHHHHHHHHccccHHHHHHHHccccccEEEEEEcccccccccccccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHcccccccccccccccccccccccccEEcccccccccccccccccccccHHHHccccccHHHHHHccccEEEEEccccccccccEEEccccccccEEEcccccccccccEEEEcccccccccEEEEEcccEEEEEEcccccccEEEcccccEEccccccccccccccEEEEcccccEEEEEEEEcccccccccccccccccccc
cHHHHHcccccccEcEEEEEEEEEcccccccccccEEEEEccccEEEEEEccccEEEEEEEEcccccccccccccHHHHHHHHccccHHHHHHHHHccHHHHHHHHHHccccccccccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccccHcccccccccccccccHHHHHHHHcHHHHHHHHcccEEEEEccccccccccEEEEEccccccEEEEccccccccccEEEEccccccHHcEEEEEccccEEEEEccccccEEEEcccccEEEccccccEEEccccEEEEccccEEEEEEEEEEccccccHHccccccEEEcc
mvrknlfgpqeaiysgytcytgiadfvpadiesvgYRVFLGHKqyfvssdvgagkmQWYAfhkepaggvdgpegkKERLLKIFEGWCDNVVDLILATDEEAILRrdiydrtpiftwgrgrvtllgdsvhamqpnlgqggcmaiEDGYQLAVELEKACkksnesktpIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLgvglgplsfltkfriphpgrvggrFFIDLAMPLMLSWVlggnssklegrspccklsdkaSDNLRTWFRDDDALEramngewflvpsgsenvvsqpiylsvshenepyligseshedfsrtsivipsaqvsKMHARISYKDGAFYLIDLqsehgtyvtdnegrryrvssnfparfrpsdtiefgsdkkaIFRVKVigtppnnnserKEAGEILQAV
mvrknlfgpqeAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKepaggvdgpeGKKERLLKIFEGWCDNVVDLILATdeeailrrdiydrtpiftwGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACkksnesktpidiVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDLAMPLMLSWVLGGNSSKLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGseshedfsrTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGtyvtdnegrryrvssnfparfrpsdtiefgsdkkaifrvkvigtppnnnserkeageilqav
MVRKNLFGPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDLAMPLMLSWVLGGNSSKLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIGTPPNNNSERKEAGEILQAV
******FGPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGG*******KERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACK*******PIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDLAMPLMLSWVLGGNS*******PCCKLSDKASDNLRTWFRDDDALERAMNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIG******FSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVS**F********TIEFGSDKKAIFRVKVI********************
MVRKNLFGPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDLAMPLMLSWVLGGNSSKLE******************WFRDDDALERAMNGEWFLVPSGSENVVSQPIYLSVSHENEP*L************SIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVK**********************
MVRKNLFGPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDLAMPLMLSWVLGGNSSKLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIGTPPNNNSERKEAGEILQAV
MVRKNLFGPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDLAMPLMLSWVLGGNSSKLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIGTPPNNN*************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MVRKNLFGPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDLAMPLMLSWVLGGNSSKLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIGTPPNNNSERKEAGEILQAV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query420 2.2.26 [Sep-21-2011]
O81360661 Zeaxanthin epoxidase, chl N/A no 0.980 0.623 0.770 0.0
Q40412663 Zeaxanthin epoxidase, chl N/A no 0.980 0.621 0.744 0.0
P93236669 Zeaxanthin epoxidase, chl N/A no 0.988 0.620 0.734 0.0
Q9FGC7667 Zeaxanthin epoxidase, chl yes no 0.992 0.625 0.718 0.0
Q96375660 Zeaxanthin epoxidase, chl N/A no 0.966 0.615 0.718 1e-175
Q0JCU7659 Zeaxanthin epoxidase, chl yes no 0.983 0.626 0.712 1e-173
A6T923384 FAD-dependent urate hydro yes no 0.397 0.434 0.331 3e-15
B6D1N4384 FAD-dependent urate hydro yes no 0.397 0.434 0.331 1e-14
B5B0J6384 FAD-dependent urate hydro yes no 0.383 0.419 0.315 2e-13
P86491385 6-hydroxynicotinate 3-mon yes no 0.4 0.436 0.303 1e-12
>sp|O81360|ABA2_PRUAR Zeaxanthin epoxidase, chloroplastic OS=Prunus armeniaca PE=2 SV=1 Back     alignment and function desciption
 Score =  664 bits (1712), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/418 (77%), Positives = 357/418 (85%), Gaps = 6/418 (1%)

Query: 2   VRKNLFGPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAF 61
           VRKNLFG  EA+YSGYTCYTGIADFVPADI SVGYRVFLGHKQYFVSSDVG GKMQWYAF
Sbjct: 249 VRKNLFGLNEAVYSGYTCYTGIADFVPADINSVGYRVFLGHKQYFVSSDVGGGKMQWYAF 308

Query: 62  HKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRV 121
           HKE  GGVD P GKKERLLKIFEGWCDNV+DL+LAT+E+AILRRDIYDRTPI TWG+G V
Sbjct: 309 HKESPGGVDSPNGKKERLLKIFEGWCDNVIDLLLATEEDAILRRDIYDRTPILTWGKGHV 368

Query: 122 TLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARR 181
           TLLGDSVHAMQPN+GQGGCMAIEDGYQLA+EL+KA KKS+E+ TP+D+ S+L+SYE +RR
Sbjct: 369 TLLGDSVHAMQPNMGQGGCMAIEDGYQLALELDKAWKKSSETGTPVDVASSLRSYENSRR 428

Query: 182 LRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDLAMPLMLS 241
           LRVA+IHG+AR AA+MASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGR FID AMPLMLS
Sbjct: 429 LRVAIIHGMARMAALMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRVFIDKAMPLMLS 488

Query: 242 WVLGGNSSKLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGEWFLVPSGSENVVSQPI 301
           WVLGGNSSKLEGRSP C+LSDKASD LR WF DDDALERA++GEW+L+P G +N  SQ I
Sbjct: 489 WVLGGNSSKLEGRSPSCRLSDKASDQLRNWFEDDDALERAIDGEWYLIPCGQDNDASQLI 548

Query: 302 YLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYV 361
            L+   +N P +IGS  H D S  SI IP  QVS+MHARISYKDGAFYL DL+SEHGT++
Sbjct: 549 CLNRDEKN-PCIIGSAPHGDVSGISIAIPKPQVSEMHARISYKDGAFYLTDLRSEHGTWI 607

Query: 362 TDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIGTPPNNNSERKEAGEILQA 419
            D EG+RYRV  NFPARFRPSD IE GS K A FRVKV+ + P   S  KE   ILQA
Sbjct: 608 ADIEGKRYRVPPNFPARFRPSDAIEIGSQKVA-FRVKVMKSSP--GSVEKEG--ILQA 660
Converts zeaxanthin into antheraxanthin and subsequently violaxanthin. Involved in the epoxidation of zeaxanthin.
Prunus armeniaca (taxid: 36596)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 3EC: .EC: 9EC: 0
>sp|Q40412|ABA2_NICPL Zeaxanthin epoxidase, chloroplastic OS=Nicotiana plumbaginifolia GN=ABA2 PE=1 SV=1 Back     alignment and function description
>sp|P93236|ABA2_SOLLC Zeaxanthin epoxidase, chloroplastic OS=Solanum lycopersicum PE=2 SV=1 Back     alignment and function description
>sp|Q9FGC7|ZEP_ARATH Zeaxanthin epoxidase, chloroplastic OS=Arabidopsis thaliana GN=ZEP PE=1 SV=1 Back     alignment and function description
>sp|Q96375|ABA2_CAPAN Zeaxanthin epoxidase, chloroplastic OS=Capsicum annuum PE=2 SV=1 Back     alignment and function description
>sp|Q0JCU7|ZEP_ORYSJ Zeaxanthin epoxidase, chloroplastic OS=Oryza sativa subsp. japonica GN=ZEP PE=2 SV=1 Back     alignment and function description
>sp|A6T923|HPXO_KLEP7 FAD-dependent urate hydroxylase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=hpxO PE=1 SV=1 Back     alignment and function description
>sp|B6D1N4|HPXO_KLEPN FAD-dependent urate hydroxylase OS=Klebsiella pneumoniae GN=hpxO PE=3 SV=1 Back     alignment and function description
>sp|B5B0J6|HPXO_KLEOX FAD-dependent urate hydroxylase OS=Klebsiella oxytoca GN=hpxO PE=3 SV=1 Back     alignment and function description
>sp|P86491|6HN3M_PSEFL 6-hydroxynicotinate 3-monooxygenase OS=Pseudomonas fluorescens PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query420
290361322 664 zeaxanthin epoxidase [Citrus unshiu] 0.997 0.631 0.995 0.0
290361326 664 zeaxanthin epoxidase [Citrus sinensis] 0.997 0.631 0.992 0.0
17402597 664 zeaxanthin epoxidase [Citrus unshiu] 0.997 0.631 0.992 0.0
190576749 664 zeaxanthin epoxidase [Citrus maxima] 0.997 0.631 0.971 0.0
290361328 664 zeaxanthin epoxidase [Citrus sinensis] 0.997 0.631 0.968 0.0
290361324 664 zeaxanthin epoxidase [Citrus unshiu] 0.997 0.631 0.968 0.0
225438718 658 PREDICTED: zeaxanthin epoxidase, chlorop 0.985 0.629 0.792 0.0
38112202 658 zeaxanthin epoxidase [Vitis vinifera] 0.985 0.629 0.792 0.0
224084342 692 predicted protein [Populus trichocarpa] 0.992 0.602 0.732 0.0
399158079 658 zeaxanthin epoxidase 1 [Vitis vinifera] 0.985 0.629 0.789 0.0
>gi|290361322|dbj|BAI79257.1| zeaxanthin epoxidase [Citrus unshiu] Back     alignment and taxonomy information
 Score =  868 bits (2243), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/419 (99%), Positives = 417/419 (99%)

Query: 2   VRKNLFGPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAF 61
           VRKNLFGPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAF
Sbjct: 246 VRKNLFGPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAF 305

Query: 62  HKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRV 121
           HKEPAGGVD PEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRV
Sbjct: 306 HKEPAGGVDDPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRV 365

Query: 122 TLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARR 181
           TLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARR
Sbjct: 366 TLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARR 425

Query: 182 LRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDLAMPLMLS 241
           LRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDLAMPLMLS
Sbjct: 426 LRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDLAMPLMLS 485

Query: 242 WVLGGNSSKLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGEWFLVPSGSENVVSQPI 301
           WVLGGNSSKLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGEWFLVPSGSENVVSQPI
Sbjct: 486 WVLGGNSSKLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGEWFLVPSGSENVVSQPI 545

Query: 302 YLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYV 361
           YLSVSHENEPYLIGSESHEDF RTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYV
Sbjct: 546 YLSVSHENEPYLIGSESHEDFPRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYV 605

Query: 362 TDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIGTPPNNNSERKEAGEILQAV 420
           TDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIGTPPNNNSERKEAGEILQAV
Sbjct: 606 TDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIGTPPNNNSERKEAGEILQAV 664

Source: Citrus unshiu

Species: Citrus unshiu

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|290361326|dbj|BAI79259.1| zeaxanthin epoxidase [Citrus sinensis] Back     alignment and taxonomy information
>gi|17402597|dbj|BAB78733.1| zeaxanthin epoxidase [Citrus unshiu] Back     alignment and taxonomy information
>gi|190576749|gb|ACE79170.1| zeaxanthin epoxidase [Citrus maxima] Back     alignment and taxonomy information
>gi|290361328|dbj|BAI79260.1| zeaxanthin epoxidase [Citrus sinensis] Back     alignment and taxonomy information
>gi|290361324|dbj|BAI79258.1| zeaxanthin epoxidase [Citrus unshiu] Back     alignment and taxonomy information
>gi|225438718|ref|XP_002282543.1| PREDICTED: zeaxanthin epoxidase, chloroplastic [Vitis vinifera] gi|296082420|emb|CBI21425.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|38112202|gb|AAR11195.1| zeaxanthin epoxidase [Vitis vinifera] Back     alignment and taxonomy information
>gi|224084342|ref|XP_002307265.1| predicted protein [Populus trichocarpa] gi|222856714|gb|EEE94261.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|399158079|gb|AFP28801.1| zeaxanthin epoxidase 1 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query420
TAIR|locus:2158083667 ABA1 "ABA DEFICIENT 1" [Arabid 0.990 0.623 0.720 3.6e-169
UNIPROTKB|Q0JCU7659 ZEP "Zeaxanthin epoxidase, chl 0.983 0.626 0.712 2.9e-158
UNIPROTKB|A6T923384 hpxO "FAD-dependent urate hydr 0.416 0.455 0.324 2.8e-14
UNIPROTKB|B6D1N4384 hpxO "FAD-dependent urate hydr 0.416 0.455 0.324 1.1e-13
UNIPROTKB|B5B0J6384 hpxO "FAD-dependent urate hydr 0.409 0.447 0.309 1.5e-12
TAIR|locus:2060584427 CTF2B "AT2G29720" [Arabidopsis 0.395 0.388 0.314 1.3e-10
TAIR|locus:2058723439 CTF2A "AT2G35660" [Arabidopsis 0.385 0.369 0.313 3e-10
UNIPROTKB|Q88FY2382 nicC "6-hydroxynicotinate 3-mo 0.430 0.473 0.285 3.6e-10
UNIPROTKB|P86491385 P86491 "6-hydroxynicotinate 3- 0.371 0.405 0.309 4.8e-10
ASPGD|ASPL0000066976234 AN10916 [Emericella nidulans ( 0.278 0.5 0.346 9.9e-09
TAIR|locus:2158083 ABA1 "ABA DEFICIENT 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1645 (584.1 bits), Expect = 3.6e-169, P = 3.6e-169
 Identities = 301/418 (72%), Positives = 353/418 (84%)

Query:     2 VRKNLFGPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAF 61
             VR NLFG  EA YSGYTCYTGIADF+PADIESVGYRVFLGHKQYFVSSDVG GKMQWYAF
Sbjct:   249 VRNNLFGRSEATYSGYTCYTGIADFIPADIESVGYRVFLGHKQYFVSSDVGGGKMQWYAF 308

Query:    62 HKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRV 121
             H+EPAGG D P G K+RL +IF+GWCDNV+DL+ AT+EEAILRRDIYDR+P FTWG+GRV
Sbjct:   309 HEEPAGGADAPNGMKKRLFEIFDGWCDNVLDLLHATEEEAILRRDIYDRSPGFTWGKGRV 368

Query:   122 TLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARR 181
             TLLGDS+HAMQPN+GQGGCMAIED +QLA+EL++A K+S E+ TP+D+VS+LK YE +RR
Sbjct:   369 TLLGDSIHAMQPNMGQGGCMAIEDSFQLALELDEAWKQSVETTTPVDVVSSLKRYEESRR 428

Query:   182 LRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDLAMPLMLS 241
             LRVA+IH +AR AA+MASTYKAYLGVGLGPLSFLTKFR+PHPGRVGGRFF+D+AMP ML 
Sbjct:   429 LRVAIIHAMARMAAIMASTYKAYLGVGLGPLSFLTKFRVPHPGRVGGRFFVDIAMPSMLD 488

Query:   242 WVLGGNSSKLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGEWFLVPSGSENVVSQPI 301
             WVLGGNS KL+GR P C+L+DKA D LR WF DDDALER + GEW+L+P G +  VS+ +
Sbjct:   489 WVLGGNSEKLQGRPPSCRLTDKADDRLREWFEDDDALERTIKGEWYLIPHGDDCCVSETL 548

Query:   302 YLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYV 361
              L+   E++P ++GSE  +DF    IVIPS+QVSKMHAR+ YKDGAF+L+DL+SEHGTYV
Sbjct:   549 CLT-KDEDQPCIVGSEPDQDFPGMRIVIPSSQVSKMHARVIYKDGAFFLMDLRSEHGTYV 607

Query:   362 TDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIG-TPPNNNSERKEAGEILQ 418
             TDNEGRRYR + NFPARFR SD IEFGSDKKA FRVKVI  TP +         ++LQ
Sbjct:   608 TDNEGRRYRATPNFPARFRSSDIIEFGSDKKAAFRVKVIRKTPKSTRKNESNNDKLLQ 665
GO:0008152 "metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM;IEA;IDA
GO:0009540 "zeaxanthin epoxidase [overall
GO:0009688 "abscisic acid biosynthetic process" evidence=IEA;TAS
GO:0016020 "membrane" evidence=IEA
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0006970 "response to osmotic stress" evidence=IMP
GO:0009414 "response to water deprivation" evidence=IMP
GO:0010182 "sugar mediated signaling pathway" evidence=TAS
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0009408 "response to heat" evidence=IMP
GO:0010114 "response to red light" evidence=IEP
GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA
GO:0016123 "xanthophyll biosynthetic process" evidence=IMP
UNIPROTKB|Q0JCU7 ZEP "Zeaxanthin epoxidase, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|A6T923 hpxO "FAD-dependent urate hydroxylase" [Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (taxid:272620)] Back     alignment and assigned GO terms
UNIPROTKB|B6D1N4 hpxO "FAD-dependent urate hydroxylase" [Klebsiella pneumoniae (taxid:573)] Back     alignment and assigned GO terms
UNIPROTKB|B5B0J6 hpxO "FAD-dependent urate hydroxylase" [Klebsiella oxytoca (taxid:571)] Back     alignment and assigned GO terms
TAIR|locus:2060584 CTF2B "AT2G29720" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2058723 CTF2A "AT2G35660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q88FY2 nicC "6-hydroxynicotinate 3-monooxygenase" [Pseudomonas putida KT2440 (taxid:160488)] Back     alignment and assigned GO terms
UNIPROTKB|P86491 P86491 "6-hydroxynicotinate 3-monooxygenase" [Pseudomonas fluorescens (taxid:294)] Back     alignment and assigned GO terms
ASPGD|ASPL0000066976 AN10916 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O81360ABA2_PRUAR1, ., 1, 4, ., 1, 3, ., 9, 00.77030.98090.6232N/Ano
Q0JCU7ZEP_ORYSJ1, ., 1, 4, ., 1, 3, ., 9, 00.71290.98330.6267yesno
Q96375ABA2_CAPAN1, ., 1, 4, ., 1, 3, ., 9, 00.71810.96660.6151N/Ano
Q40412ABA2_NICPL1, ., 1, 4, ., 1, 3, ., 9, 00.74450.98090.6214N/Ano
P93236ABA2_SOLLC1, ., 1, 4, ., 1, 3, ., 9, 00.73440.98800.6203N/Ano
Q9FGC7ZEP_ARATH1, ., 1, 4, ., 1, 3, ., 9, 00.71830.99280.6251yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.130.921
3rd Layer1.14.13.900.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
ZEP
SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (658 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00037718001
SubName- Full=Chromosome undetermined scaffold_91, whole genome shotgun sequence; (306 aa)
     •• 0.925
GSVIVG00007662001
SubName- Full=Chromosome undetermined scaffold_197, whole genome shotgun sequence; (479 aa)
     •• 0.925
bch1
SubName- Full=Chromosome chr2 scaffold_132, whole genome shotgun sequence; (299 aa)
     •• 0.925
GSVIVG00037315001
SubName- Full=Chromosome undetermined scaffold_87, whole genome shotgun sequence; (497 aa)
     •• 0.908
PDS1
SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (582 aa)
      • 0.483
FLC
SubName- Full=Chromosome chr1 scaffold_136, whole genome shotgun sequence; (68 aa)
      • 0.481
GPPS
SubName- Full=Chromosome chr6 scaffold_28, whole genome shotgun sequence; (422 aa)
      • 0.480

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query420
PLN02927668 PLN02927, PLN02927, antheraxanthin epoxidase/zeaxa 0.0
PRK06753373 PRK06753, PRK06753, hypothetical protein; Provisio 1e-18
PRK08163396 PRK08163, PRK08163, salicylate hydroxylase; Provis 2e-18
cd00060102 cd00060, FHA, Forkhead associated domain (FHA); fo 3e-18
pfam0049867 pfam00498, FHA, FHA domain 1e-14
PRK06847375 PRK06847, PRK06847, hypothetical protein; Provisio 4e-13
PRK07538413 PRK07538, PRK07538, hypothetical protein; Provisio 1e-12
COG0654387 COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydrox 2e-12
PRK06475400 PRK06475, PRK06475, salicylate hydroxylase; Provis 2e-09
smart0024052 smart00240, FHA, Forkhead associated domain 5e-09
COG1716191 COG1716, COG1716, FOG: FHA domain [Signal transduc 6e-09
TIGR03219414 TIGR03219, salicylate_mono, salicylate 1-monooxyge 2e-07
PRK08255 765 PRK08255, PRK08255, salicylyl-CoA 5-hydroxylase; R 3e-05
PRK07045388 PRK07045, PRK07045, putative monooxygenase; Review 3e-04
TIGR03354 396 TIGR03354, VI_FHA, type VI secretion system FHA do 4e-04
TIGR01988387 TIGR01988, Ubi-OHases, Ubiquinone biosynthesis hyd 4e-04
COG3456 430 COG3456, COG3456, Predicted component of the type 4e-04
PRK06183500 PRK06183, mhpA, 3-(3-hydroxyphenyl)propionate hydr 5e-04
PRK07588391 PRK07588, PRK07588, hypothetical protein; Provisio 0.001
pfam01494349 pfam01494, FAD_binding_3, FAD binding domain 0.003
PRK05868372 PRK05868, PRK05868, hypothetical protein; Validate 0.004
>gnl|CDD|178515 PLN02927, PLN02927, antheraxanthin epoxidase/zeaxanthin epoxidase Back     alignment and domain information 
 Score =  654 bits (1688), Expect = 0.0
 Identities = 302/418 (72%), Positives = 354/418 (84%), Gaps = 2/418 (0%)

Query: 2   VRKNLFGPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAF 61
           VR NLFG  EA YSGYTCYTGIADF+PADIESVGYRVFLGHKQYFVSSDVG GKMQWYAF
Sbjct: 250 VRNNLFGRSEATYSGYTCYTGIADFIPADIESVGYRVFLGHKQYFVSSDVGGGKMQWYAF 309

Query: 62  HKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRV 121
           H+EPAGG D P G K+RL +IF+GWCDNV+DL+ AT+E+AILRRDIYDR+P FTWG+GRV
Sbjct: 310 HEEPAGGADAPNGMKKRLFEIFDGWCDNVLDLLHATEEDAILRRDIYDRSPGFTWGKGRV 369

Query: 122 TLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARR 181
           TLLGDS+HAMQPN+GQGGCMAIED +QLA+EL++A K+S E+ TP+D+VS+LK YE +RR
Sbjct: 370 TLLGDSIHAMQPNMGQGGCMAIEDSFQLALELDEAWKQSVETNTPVDVVSSLKRYEESRR 429

Query: 182 LRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDLAMPLMLS 241
           LRVA+IH +AR AA+MASTYKAYLGVGLGPLSFLTKFR+PHPGRVGGRFF+D+AMPLML 
Sbjct: 430 LRVAIIHAMARMAAIMASTYKAYLGVGLGPLSFLTKFRVPHPGRVGGRFFVDIAMPLMLD 489

Query: 242 WVLGGNSSKLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGEWFLVPSGSENVVSQPI 301
           WVLGGNS KLEGR P C+L+DKA D LR WF DDDALER + GEW+L+P G +  VS+ +
Sbjct: 490 WVLGGNSEKLEGRPPSCRLTDKADDRLREWFEDDDALERTIKGEWYLIPHGDDCCVSETL 549

Query: 302 YLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYV 361
            L+   E++P ++GSE  +DF    IVIPS+QVSKMHAR+ YKDGAF+L+DL+SEHGTYV
Sbjct: 550 CLT-KDEDQPCIVGSEPDQDFPGMRIVIPSSQVSKMHARVIYKDGAFFLMDLRSEHGTYV 608

Query: 362 TDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI-GTPPNNNSERKEAGEILQ 418
           TDNEGRRYR + NFPARFR SD IEFGSDKKA FRVKVI  TP +         ++LQ
Sbjct: 609 TDNEGRRYRATPNFPARFRSSDIIEFGSDKKAAFRVKVIRKTPKSTRKNESNNDKLLQ 666

Length = 668
>gnl|CDD|168661 PRK06753, PRK06753, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|181262 PRK08163, PRK08163, salicylate hydroxylase; Provisional Back     alignment and domain information
>gnl|CDD|238017 cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins Back     alignment and domain information
>gnl|CDD|215951 pfam00498, FHA, FHA domain Back     alignment and domain information
>gnl|CDD|235874 PRK06847, PRK06847, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|236046 PRK07538, PRK07538, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|223727 COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] Back     alignment and domain information
>gnl|CDD|180582 PRK06475, PRK06475, salicylate hydroxylase; Provisional Back     alignment and domain information
>gnl|CDD|214578 smart00240, FHA, Forkhead associated domain Back     alignment and domain information
>gnl|CDD|224630 COG1716, COG1716, FOG: FHA domain [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|132263 TIGR03219, salicylate_mono, salicylate 1-monooxygenase Back     alignment and domain information
>gnl|CDD|236203 PRK08255, PRK08255, salicylyl-CoA 5-hydroxylase; Reviewed Back     alignment and domain information
>gnl|CDD|136171 PRK07045, PRK07045, putative monooxygenase; Reviewed Back     alignment and domain information
>gnl|CDD|234178 TIGR03354, VI_FHA, type VI secretion system FHA domain protein Back     alignment and domain information
>gnl|CDD|233671 TIGR01988, Ubi-OHases, Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family Back     alignment and domain information
>gnl|CDD|225987 COG3456, COG3456, Predicted component of the type VI protein secretion system, contains a FHA domain [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|235727 PRK06183, mhpA, 3-(3-hydroxyphenyl)propionate hydroxylase; Validated Back     alignment and domain information
>gnl|CDD|169028 PRK07588, PRK07588, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|216530 pfam01494, FAD_binding_3, FAD binding domain Back     alignment and domain information
>gnl|CDD|180297 PRK05868, PRK05868, hypothetical protein; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 420
PLN02927668 antheraxanthin epoxidase/zeaxanthin epoxidase 100.0
TIGR03219414 salicylate_mono salicylate 1-monooxygenase. Member 99.95
PRK06475400 salicylate hydroxylase; Provisional 99.94
PRK08163396 salicylate hydroxylase; Provisional 99.93
PRK06753373 hypothetical protein; Provisional 99.93
PRK07236386 hypothetical protein; Provisional 99.92
PRK07538413 hypothetical protein; Provisional 99.91
PRK06847375 hypothetical protein; Provisional 99.9
PRK07588391 hypothetical protein; Provisional 99.89
PRK05868372 hypothetical protein; Validated 99.88
TIGR02360390 pbenz_hydroxyl 4-hydroxybenzoate 3-monooxygenase. 99.84
PRK05714405 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy 99.84
KOG2614420 consensus Kynurenine 3-monooxygenase and related f 99.83
PRK06996398 hypothetical protein; Provisional 99.83
PRK07045388 putative monooxygenase; Reviewed 99.83
PRK06617374 2-octaprenyl-6-methoxyphenyl hydroxylase; Validate 99.82
PRK08850405 2-octaprenyl-6-methoxyphenol hydroxylase; Validate 99.82
PLN02985514 squalene monooxygenase 99.8
PRK07494388 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisio 99.8
PRK08013400 oxidoreductase; Provisional 99.8
PTZ00367567 squalene epoxidase; Provisional 99.8
PRK08849384 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy 99.79
COG0654387 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and 99.78
PRK08243392 4-hydroxybenzoate 3-monooxygenase; Validated 99.78
PRK08773392 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy 99.78
PRK06183538 mhpA 3-(3-hydroxyphenyl)propionate hydroxylase; Va 99.77
TIGR01989437 COQ6 Ubiquinone biosynthesis mono0xygenase COQ6. T 99.77
PRK08244493 hypothetical protein; Provisional 99.77
PRK07333403 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisio 99.76
PRK08020391 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquin 99.76
PRK09126392 hypothetical protein; Provisional 99.76
PRK06185407 hypothetical protein; Provisional 99.76
PRK07364415 2-octaprenyl-6-methoxyphenyl hydroxylase; Validate 99.76
TIGR01984382 UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase. T 99.74
PRK05732395 2-octaprenyl-6-methoxyphenyl hydroxylase; Validate 99.74
PF0049868 FHA: FHA domain; InterPro: IPR000253 The forkhead- 99.73
PRK06184502 hypothetical protein; Provisional 99.73
TIGR01988385 Ubi-OHases Ubiquinone biosynthesis hydroxylase, Ub 99.73
PRK08294634 phenol 2-monooxygenase; Provisional 99.72
PRK07608388 ubiquinone biosynthesis hydroxylase family protein 99.72
PRK08255 765 salicylyl-CoA 5-hydroxylase; Reviewed 99.7
PF01494356 FAD_binding_3: FAD binding domain; InterPro: IPR00 99.7
PRK06126545 hypothetical protein; Provisional 99.7
PRK08132547 FAD-dependent oxidoreductase; Provisional 99.68
PRK06834488 hypothetical protein; Provisional 99.67
PRK07190487 hypothetical protein; Provisional 99.65
cd00060102 FHA Forkhead associated domain (FHA); found in euk 99.49
TIGR03354 396 VI_FHA type VI secretion system FHA domain protein 99.45
PF08491276 SE: Squalene epoxidase; InterPro: IPR013698 This d 99.34
COG1716191 FOG: FHA domain [Signal transduction mechanisms] 99.29
TIGR02032295 GG-red-SF geranylgeranyl reductase family. This mo 99.28
KOG1882293 consensus Transcriptional regulator SNIP1, contain 99.22
smart0024052 FHA Forkhead associated domain. Found in eukaryoti 99.19
COG3456 430 Predicted component of the type VI protein secreti 99.15
KOG1881 793 consensus Anion exchanger adaptor protein Kanadapt 98.87
TIGR02023388 BchP-ChlP geranylgeranyl reductase. This model rep 98.82
KOG3855481 consensus Monooxygenase involved in coenzyme Q (ub 98.7
TIGR01789370 lycopene_cycl lycopene cyclase. This model represe 98.62
PLN00093450 geranylgeranyl diphosphate reductase; Provisional 98.62
TIGR01790388 carotene-cycl lycopene cyclase family protein. Thi 98.61
KOG1880 337 consensus Nuclear inhibitor of phosphatase-1 [Gene 98.59
PRK11445351 putative oxidoreductase; Provisional 98.44
TIGR02028398 ChlP geranylgeranyl reductase. This model represen 98.37
KOG1298509 consensus Squalene monooxygenase [Lipid transport 97.77
KOG0615 475 consensus Serine/threonine protein kinase Chk2 and 97.62
COG0644396 FixC Dehydrogenases (flavoproteins) [Energy produc 97.39
TIGR02500 410 type_III_yscD type III secretion apparatus protein 97.34
KOG0245 1221 consensus Kinesin-like protein [Cytoskeleton] 97.08
PRK10015429 oxidoreductase; Provisional 96.98
KOG2293547 consensus Daxx-interacting protein MSP58/p78, cont 96.95
TIGR01663 526 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase 96.86
KOG1892 1629 consensus Actin filament-binding protein Afadin [C 96.67
PLN02697529 lycopene epsilon cyclase 96.48
PRK10157428 putative oxidoreductase FixC; Provisional 96.38
PF04820454 Trp_halogenase: Tryptophan halogenase; InterPro: I 95.69
PLN02463447 lycopene beta cyclase 94.91
KOG0241 1714 consensus Kinesin-like protein [Cytoskeleton] 90.01
PF05834374 Lycopene_cycl: Lycopene cyclase protein; InterPro: 87.81
>PLN02927 antheraxanthin epoxidase/zeaxanthin epoxidase Back     alignment and domain information 
Probab=100.00  E-value=2e-67  Score=554.04  Aligned_cols=418  Identities=72%  Similarity=1.269  Sum_probs=370.2

Q ss_pred             CccCcccCCCCcccceEEEEEEEeCCCCCCcCCcceEEEEcCCeEEEEEeCCCCeEEEEEEEeCCCCCCCCCcccHHHHH
Q 014684            1 MVRKNLFGPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLL   80 (420)
Q Consensus         1 ~VR~~l~g~~~~~~sG~~~~rg~~~~~p~~~~~~~~~~~~g~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~   80 (420)
                      +||+.+++..++.|+|+++|+|+++..+..........|.|++.+++.+|..+++++|+++...+.......+..+++++
T Consensus       249 ~vR~~l~g~~~~~~sG~~~~rgi~~~~p~~~~~~~~~~~~G~~~~~v~~~v~~g~~~~~~f~~~p~~~~~~~~~~~e~L~  328 (668)
T PLN02927        249 KVRNNLFGRSEATYSGYTCYTGIADFIPADIESVGYRVFLGHKQYFVSSDVGGGKMQWYAFHEEPAGGADAPNGMKKRLF  328 (668)
T ss_pred             HHHHHhcCCCCCcccceEEEEEEcCCCcccccccceEEEEcCCeEEEEEcCCCCeEEEEEEEECCccccccchhHHHHHH
Confidence            47899999888899999999999876544333334456789999999999988888888776555332233556788999


Q ss_pred             HHhcCCChHHHHHHHhcCccceeEeeecccCCCCcccCCCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhhhcc
Q 014684           81 KIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKS  160 (420)
Q Consensus        81 ~~~~~~~~~~~~li~~~~~~~~~~~~l~~~~~~~~w~~grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~~~  160 (420)
                      +.|.+|++.+.++++.++.+.+..|+++++.+..+|+.|||+|+|||||+|+|+.|||+|+|||||.+|+++|....+..
T Consensus       329 ~~f~~w~~~v~elI~~t~~~~i~~~~iyd~~p~~~W~~grVvLiGDAAH~~~P~~GqG~n~AieDa~~La~~L~~~~~~~  408 (668)
T PLN02927        329 EIFDGWCDNVLDLLHATEEDAILRRDIYDRSPGFTWGKGRVTLLGDSIHAMQPNMGQGGCMAIEDSFQLALELDEAWKQS  408 (668)
T ss_pred             HHhccCCHHHHHHHHhCccccceeeeEEeccCCCccccCcEEEEcCccCCCCCccccchHHHHHHHHHHHHHHHHhhccc
Confidence            99999999999999888765678899999888889999999999999999999999999999999999999998764321


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHhhhcCCCChhhhhhhccCCCCCcccchhhhhhhhhhHH
Q 014684          161 NESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDLAMPLML  240 (420)
Q Consensus       161 ~~~~~~~~~~~~l~~y~~~R~~r~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~  240 (420)
                      ...+...+++++|+.|+++|++|+..++..++....+...++.+++.+++|+.+++.+.+++|++..++++.+..||.|+
T Consensus       409 ~~~~~~~~~~~aL~~Ye~~R~~rv~~i~~~ar~a~~~~~~~~~y~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  488 (668)
T PLN02927        409 VETNTPVDVVSSLKRYEESRRLRVAIIHAMARMAAIMASTYKAYLGVGLGPLSFLTKFRVPHPGRVGGRFFVDIAMPLML  488 (668)
T ss_pred             cccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHhcCCCCCCceeeeeeeecccHHHh
Confidence            11122346899999999999999999999999999999999888888889999999999999999999999999999999


Q ss_pred             HHHhcccCCCCCCCCCccccCcccccchhhhhccchHHHHhcCCeEEEEEcCCCCcccccEEEeecCCCCcEEEcCCCCC
Q 014684          241 SWVLGGNSSKLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHE  320 (420)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ale~~~~~~w~l~~~~~~~~~~~~~~l~~~~~~~~~~IGR~~~~  320 (420)
                      .|+.+.+.+.++|+...|++.||.+..+..|+++++++|+++.++|+|+|.++.+...+.|+|. ++++.+++|||.+..
T Consensus       489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~~~~~~~~~~~~~l~-~~~~~p~~iG~~~~~  567 (668)
T PLN02927        489 DWVLGGNSEKLEGRPPSCRLTDKADDRLREWFEDDDALERTIKGEWYLIPHGDDCCVSETLCLT-KDEDQPCIVGSEPDQ  567 (668)
T ss_pred             hhhhcCCccccCCCCCccccccchhHHHHHHhcccHHHHHhhcCCeEEEecCCCCcccceeeee-cCCCCCeEecCCCCc
Confidence            9999999999999999999999999999999999999999999999999999888777889998 888999999999996


Q ss_pred             CCCcceEEeCCCcccccceEEEEECCEEEEEEcCCCccceecCCCCceEeecCCCcEEeCCCCEEEECCCceeEEEEEEe
Q 014684          321 DFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI  400 (420)
Q Consensus       321 ~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~vng~~~~~~~l~~~~~~~L~~Gd~i~~G~~~~~~~~~~~~  400 (420)
                      +.++..|+|++++||+.||+|.++++.|+|+||+|+||||||+++|+++++.|+.+..|++||+|+||+.+...|++++.
T Consensus       568 ~~~~~~i~i~~~~vS~~Ha~i~~~~~~~~~~Dl~S~nGT~v~~~~~~r~~~~p~~~~~l~~~d~I~~g~~~~~~fr~~~~  647 (668)
T PLN02927        568 DFPGMRIVIPSSQVSKMHARVIYKDGAFFLMDLRSEHGTYVTDNEGRRYRATPNFPARFRSSDIIEFGSDKKAAFRVKVI  647 (668)
T ss_pred             CCCCceEEecCCccChhHeEEEEECCEEEEEECCCCCccEEeCCCCceEecCCCCceEeCCCCEEEeCCCcceeEEEEee
Confidence            66666679999999999999999999999999999999999999999899999999999999999999988889999999


Q ss_pred             cCCCCCCcccccc--ccccccC
Q 014684          401 GTPPNNNSERKEA--GEILQAV  420 (420)
Q Consensus       401 ~~~p~~~~~~~~~--~~~~~~~  420 (420)
                      ..+|..+ +++|.  .++||+|
T Consensus       648 ~~~~~~~-~~~~~~~~~~~~~~  668 (668)
T PLN02927        648 RKTPKST-RKNESNNDKLLQTA  668 (668)
T ss_pred             cCCCcch-hhcccchhhhhhcC
Confidence            9999887 55554  5899876

>TIGR03219 salicylate_mono salicylate 1-monooxygenase Back     alignment and domain information
>PRK06475 salicylate hydroxylase; Provisional Back     alignment and domain information
>PRK08163 salicylate hydroxylase; Provisional Back     alignment and domain information
>PRK06753 hypothetical protein; Provisional Back     alignment and domain information
>PRK07236 hypothetical protein; Provisional Back     alignment and domain information
>PRK07538 hypothetical protein; Provisional Back     alignment and domain information
>PRK06847 hypothetical protein; Provisional Back     alignment and domain information
>PRK07588 hypothetical protein; Provisional Back     alignment and domain information
>PRK05868 hypothetical protein; Validated Back     alignment and domain information
>TIGR02360 pbenz_hydroxyl 4-hydroxybenzoate 3-monooxygenase Back     alignment and domain information
>PRK05714 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional Back     alignment and domain information
>KOG2614 consensus Kynurenine 3-monooxygenase and related flavoprotein monooxygenases [Energy production and conversion; General function prediction only] Back     alignment and domain information
>PRK06996 hypothetical protein; Provisional Back     alignment and domain information
>PRK07045 putative monooxygenase; Reviewed Back     alignment and domain information
>PRK06617 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated Back     alignment and domain information
>PRK08850 2-octaprenyl-6-methoxyphenol hydroxylase; Validated Back     alignment and domain information
>PLN02985 squalene monooxygenase Back     alignment and domain information
>PRK07494 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional Back     alignment and domain information
>PRK08013 oxidoreductase; Provisional Back     alignment and domain information
>PTZ00367 squalene epoxidase; Provisional Back     alignment and domain information
>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional Back     alignment and domain information
>COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] Back     alignment and domain information
>PRK08243 4-hydroxybenzoate 3-monooxygenase; Validated Back     alignment and domain information
>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated Back     alignment and domain information
>PRK06183 mhpA 3-(3-hydroxyphenyl)propionate hydroxylase; Validated Back     alignment and domain information
>TIGR01989 COQ6 Ubiquinone biosynthesis mono0xygenase COQ6 Back     alignment and domain information
>PRK08244 hypothetical protein; Provisional Back     alignment and domain information
>PRK07333 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional Back     alignment and domain information
>PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed Back     alignment and domain information
>PRK09126 hypothetical protein; Provisional Back     alignment and domain information
>PRK06185 hypothetical protein; Provisional Back     alignment and domain information
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated Back     alignment and domain information
>TIGR01984 UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase Back     alignment and domain information
>PRK05732 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated Back     alignment and domain information
>PF00498 FHA: FHA domain; InterPro: IPR000253 The forkhead-associated (FHA) domain [] is a phosphopeptide recognition domain found in many regulatory proteins Back     alignment and domain information
>PRK06184 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01988 Ubi-OHases Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family Back     alignment and domain information
>PRK08294 phenol 2-monooxygenase; Provisional Back     alignment and domain information
>PRK07608 ubiquinone biosynthesis hydroxylase family protein; Provisional Back     alignment and domain information
>PRK08255 salicylyl-CoA 5-hydroxylase; Reviewed Back     alignment and domain information
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways Back     alignment and domain information
>PRK06126 hypothetical protein; Provisional Back     alignment and domain information
>PRK08132 FAD-dependent oxidoreductase; Provisional Back     alignment and domain information
>PRK06834 hypothetical protein; Provisional Back     alignment and domain information
>PRK07190 hypothetical protein; Provisional Back     alignment and domain information
>cd00060 FHA Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins Back     alignment and domain information
>TIGR03354 VI_FHA type VI secretion system FHA domain protein Back     alignment and domain information
>PF08491 SE: Squalene epoxidase; InterPro: IPR013698 This domain is found in squalene epoxidase (SE) and related proteins which are found in taxonomically diverse groups of eukaryotes and also in bacteria Back     alignment and domain information
>COG1716 FOG: FHA domain [Signal transduction mechanisms] Back     alignment and domain information
>TIGR02032 GG-red-SF geranylgeranyl reductase family Back     alignment and domain information
>KOG1882 consensus Transcriptional regulator SNIP1, contains FHA domain [Signal transduction mechanisms] Back     alignment and domain information
>smart00240 FHA Forkhead associated domain Back     alignment and domain information
>COG3456 Predicted component of the type VI protein secretion system, contains a FHA domain [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] Back     alignment and domain information
>KOG1881 consensus Anion exchanger adaptor protein Kanadaptin, contains FHA domain [General function prediction only] Back     alignment and domain information
>TIGR02023 BchP-ChlP geranylgeranyl reductase Back     alignment and domain information
>KOG3855 consensus Monooxygenase involved in coenzyme Q (ubiquinone) biosynthesis [Coenzyme transport and metabolism; Energy production and conversion] Back     alignment and domain information
>TIGR01789 lycopene_cycl lycopene cyclase Back     alignment and domain information
>PLN00093 geranylgeranyl diphosphate reductase; Provisional Back     alignment and domain information
>TIGR01790 carotene-cycl lycopene cyclase family protein Back     alignment and domain information
>KOG1880 consensus Nuclear inhibitor of phosphatase-1 [General function prediction only] Back     alignment and domain information
>PRK11445 putative oxidoreductase; Provisional Back     alignment and domain information
>TIGR02028 ChlP geranylgeranyl reductase Back     alignment and domain information
>KOG1298 consensus Squalene monooxygenase [Lipid transport and metabolism] Back     alignment and domain information
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>COG0644 FixC Dehydrogenases (flavoproteins) [Energy production and conversion] Back     alignment and domain information
>TIGR02500 type_III_yscD type III secretion apparatus protein, YscD/HrpQ family Back     alignment and domain information
>KOG0245 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>PRK10015 oxidoreductase; Provisional Back     alignment and domain information
>KOG2293 consensus Daxx-interacting protein MSP58/p78, contains FHA domain [Transcription; Signal transduction mechanisms] Back     alignment and domain information
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase Back     alignment and domain information
>KOG1892 consensus Actin filament-binding protein Afadin [Cytoskeleton] Back     alignment and domain information
>PLN02697 lycopene epsilon cyclase Back     alignment and domain information
>PRK10157 putative oxidoreductase FixC; Provisional Back     alignment and domain information
>PF04820 Trp_halogenase: Tryptophan halogenase; InterPro: IPR006905 Tryptophan halogenase catalyses the chlorination of tryptophan to form 7-chlorotryptophan Back     alignment and domain information
>PLN02463 lycopene beta cyclase Back     alignment and domain information
>KOG0241 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>PF05834 Lycopene_cycl: Lycopene cyclase protein; InterPro: IPR008671 This family consists of lycopene beta and epsilon cyclase proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query420
3rp8_A407 Crystal Structure Of Klebsiella Pneumoniae R204q Hp 2e-16
3rp6_A407 Crystal Structure Of Klebsiella Pneumoniae Hpxo Com 4e-16
3c96_A410 Crystal Structure Of The Flavin-Containing Monooxyg 1e-12
2rgj_A402 Crystal Structure Of Flavin-Containing Monooxygenas 1e-11
3gmc_A415 Crystal Structure Of 2-Methyl-3-Hydroxypyridine-5-C 2e-06
3alh_A379 Higher Resolution And Native Structure Of 2-Methyl- 2e-06
3alk_A379 Crystal Structure Of 2-Methyl-3-Hydroxypyridine-5-C 6e-06
3all_A379 Crystal Structure Of 2-Methyl-3-Hydroxypyridine-5-C 2e-05
3gmb_A415 Crystal Structure Of 2-Methyl-3-Hydroxypyridine-5-C 2e-05
4hb9_A412 Crystal Structure Of A Putative Fad Containing Mono 1e-04
>pdb|3RP8|A Chain A, Crystal Structure Of Klebsiella Pneumoniae R204q Hpxo Complexed With Fad Length = 407 Back     alignment and structure 
Iteration: 1

 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 7   FGPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPA 66
           F PQ   Y+GY  + G+ +   A      +  F+G  +      V AG+  ++     PA
Sbjct: 190 FTPQRR-YAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVPLPA 248
Query: 67  GGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGD 126
           G  +  +  +  L + F GW   V  LI A D +   R +I+D  P     RGRV LLGD
Sbjct: 249 GLAEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEPFSRLVRGRVALLGD 308
Query: 127 SVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRV 184
           + H+  P++GQGGC A+ED    AV L    +++       DI +AL+ YE  R  RV
Sbjct: 309 AGHSTTPDIGQGGCAAMED----AVVLGAVFRQTR------DIAAALREYEAQRCDRV 356
>pdb|3RP6|A Chain A, Crystal Structure Of Klebsiella Pneumoniae Hpxo Complexed With Fad Length = 407 Back     alignment and structure
>pdb|3C96|A Chain A, Crystal Structure Of The Flavin-Containing Monooxygenase Phzs From Pseudomonas Aeruginosa. Northeast Structural Genomics Consortium Target Par240 Length = 410 Back     alignment and structure
>pdb|2RGJ|A Chain A, Crystal Structure Of Flavin-Containing Monooxygenase Phzs Length = 402 Back     alignment and structure
>pdb|3GMC|A Chain A, Crystal Structure Of 2-Methyl-3-Hydroxypyridine-5-Carboxylic Acid Oxygenase With Substrate Bound Length = 415 Back     alignment and structure
>pdb|3ALH|A Chain A, Higher Resolution And Native Structure Of 2-Methyl-3-Hydroxypyridine- 5-Carboxylic Acid Oxygenase Length = 379 Back     alignment and structure
>pdb|3ALK|A Chain A, Crystal Structure Of 2-Methyl-3-Hydroxypyridine-5-Carboxylic Acid Oxygenase, Mutant Y270f Length = 379 Back     alignment and structure
>pdb|3ALL|A Chain A, Crystal Structure Of 2-Methyl-3-Hydroxypyridine-5-Carboxylic Acid Oxygenase, Mutant Y270a Length = 379 Back     alignment and structure
>pdb|3GMB|A Chain A, Crystal Structure Of 2-Methyl-3-Hydroxypyridine-5-Carboxylic Acid Oxygenase Length = 415 Back     alignment and structure
>pdb|4HB9|A Chain A, Crystal Structure Of A Putative Fad Containing Monooxygenase From Photorhabdus Luminescens Subsp. Laumondii Tto1 (Target Psi-012791) Length = 412 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query420
3rp8_A407 Flavoprotein monooxygenase; FAD-binding protein, o 5e-68
3alj_A379 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; 1e-49
3c96_A410 Flavin-containing monooxygenase; FAD, oxidoreducta 6e-43
2xdo_A398 TETX2 protein; tetracycline degradation, tigecycli 5e-42
2vou_A397 2,6-dihydroxypyridine hydroxylase; oxidoreductase, 5e-35
3c4a_A381 Probable tryptophan hydroxylase VIOD; alpha-beta p 2e-18
3va4_A132 Mediator of DNA damage checkpoint protein 1; cell 8e-12
2jpe_A140 Nuclear inhibitor of protein phosphatase 1; FHA do 3e-11
3ihm_A430 Styrene monooxygenase A; rossman fold, anti-parall 3e-10
3els_A158 PRE-mRNA leakage protein 1; intrinsically unstruct 3e-10
1uht_A118 Expressed protein; FHA domain, beta-sandwich, anti 3e-10
3elv_A205 PRE-mRNA leakage protein 1; intrinsically unstruct 1e-09
2pie_A138 E3 ubiquitin-protein ligase RNF8; FHA domain, comp 1e-09
3gqs_A106 Adenylate cyclase-like protein; FHA domain, struct 2e-09
1r21_A128 Antigen KI-67; beta sandwich, cell cycle; NMR {Hom 2e-09
2xt9_B115 Putative signal transduction protein GARA; lyase-s 2e-09
2kb3_A143 Oxoglutarate dehydrogenase inhibitor; forkhead-ass 5e-09
3po8_A100 RV0020C protein, putative uncharacterized protein 7e-09
2csw_A145 Ubiquitin ligase protein RNF8; 11-stranded beta sa 7e-09
1g6g_A127 Protein kinase RAD53; beta-sandwich, phosphopeptid 9e-09
1g3g_A164 Protien kinase SPK1; FHA domain, RAD53, phosphopep 1e-08
2kfu_A162 RV1827 PThr 22; FHA domain, phosphorylation, intra 1e-08
1mzk_A139 Kinase associated protein phosphatase; beta sandwi 1e-08
3oun_A157 Putative uncharacterized protein TB39.8; peptidogl 5e-08
2jqj_A151 DNA damage response protein kinase DUN1; protein/p 5e-08
3hx1_A131 SLR1951 protein; P74513_SYNY3, adenylate cyclase-l 7e-07
2x3n_A399 Probable FAD-dependent monooxygenase; oxidoreducta 7e-07
1lgp_A116 Cell cycle checkpoint protein CHFR; FHA, tungstate 2e-06
1wln_A120 Afadin; beta sandwich, FHA domain, structural geno 6e-06
1k0i_A394 P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, h 1e-05
3fm8_A124 Kinesin-like protein KIF13B; kinesin, GAP, GTPase 3e-05
1gxc_A149 CHK2, CDS1, serine/threonine-protein kinase CHK2; 5e-05
2dkh_A639 3-hydroxybenzoate hydroxylase; flavoprotein, monoo 5e-04
3ihg_A535 RDME; flavoenzyme, anthracycline, polyketide biosy 6e-04
3i3l_A591 Alkylhalidase CMLS; flavin-dependent halogenase, c 8e-04
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A* Length = 407 Back     alignment and structure
 Score =  220 bits (563), Expect = 5e-68
 Identities = 58/195 (29%), Positives = 87/195 (44%), Gaps = 11/195 (5%)

Query: 2   VRKNLFGPQ-EAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYA 60
           +R  + G   +  Y+GY  + G+ +   A      +  F+G  +      V AG+  ++ 
Sbjct: 183 LRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFF 242

Query: 61  FHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGR 120
               PAG  +  +  +  L + F GW   V  LI A D +   R +I+D  P     RGR
Sbjct: 243 DVPLPAGLAEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEPFSRLVRGR 302

Query: 121 VTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERAR 180
           V LLGD+ H+  P++GQGGC A+ED   L     +            DI +AL+ YE  R
Sbjct: 303 VALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQT----------RDIAAALREYEAQR 352

Query: 181 RLRVAVIHGLARSAA 195
             RV  +   AR   
Sbjct: 353 CDRVRDLVLKARKRC 367
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A* Length = 379 Back     alignment and structure
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A* Length = 410 Back     alignment and structure
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A* Length = 398 Back     alignment and structure
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2 Length = 397 Back     alignment and structure
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472} Length = 381 Back     alignment and structure
>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B Length = 132 Back     alignment and structure
>2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus} Length = 140 Back     alignment and structure
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida} Length = 430 Back     alignment and structure
>3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae} Length = 158 Back     alignment and structure
>1uht_A Expressed protein; FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.26.1.2 Length = 118 Back     alignment and structure
>3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A Length = 205 Back     alignment and structure
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2 Length = 138 Back     alignment and structure
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis} Length = 106 Back     alignment and structure
>1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A* Length = 128 Back     alignment and structure
>2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis} Length = 115 Back     alignment and structure
>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A Length = 143 Back     alignment and structure
>3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} PDB: 3poa_A* 2lc1_A Length = 100 Back     alignment and structure
>2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2 Length = 145 Back     alignment and structure
>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2 Length = 127 Back     alignment and structure
>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A* Length = 164 Back     alignment and structure
>2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A Length = 162 Back     alignment and structure
>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis} Length = 157 Back     alignment and structure
>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A* Length = 151 Back     alignment and structure
>3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP} Length = 131 Back     alignment and structure
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa} Length = 399 Back     alignment and structure
>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A Length = 116 Back     alignment and structure
>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2 Length = 120 Back     alignment and structure
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ... Length = 394 Back     alignment and structure
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A* Length = 124 Back     alignment and structure
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2 Length = 149 Back     alignment and structure
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A* Length = 639 Back     alignment and structure
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens} Length = 535 Back     alignment and structure
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae} Length = 591 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query420
3rp8_A407 Flavoprotein monooxygenase; FAD-binding protein, o 99.92
4hb9_A412 Similarities with probable monooxygenase; flavin, 99.89
2vou_A397 2,6-dihydroxypyridine hydroxylase; oxidoreductase, 99.89
2xdo_A398 TETX2 protein; tetracycline degradation, tigecycli 99.86
3c96_A410 Flavin-containing monooxygenase; FAD, oxidoreducta 99.85
3c4a_A381 Probable tryptophan hydroxylase VIOD; alpha-beta p 99.83
4h87_A130 Kanadaptin; FHA domain of PF00498, mRNA processing 99.83
3alj_A379 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; 99.82
3va4_A132 Mediator of DNA damage checkpoint protein 1; cell 99.82
2x3n_A399 Probable FAD-dependent monooxygenase; oxidoreducta 99.81
3gqs_A106 Adenylate cyclase-like protein; FHA domain, struct 99.8
2pie_A138 E3 ubiquitin-protein ligase RNF8; FHA domain, comp 99.8
1uht_A118 Expressed protein; FHA domain, beta-sandwich, anti 99.79
2xt9_B115 Putative signal transduction protein GARA; lyase-s 99.78
3po8_A100 RV0020C protein, putative uncharacterized protein 99.78
3els_A158 PRE-mRNA leakage protein 1; intrinsically unstruct 99.78
2kb3_A143 Oxoglutarate dehydrogenase inhibitor; forkhead-ass 99.78
2jqj_A151 DNA damage response protein kinase DUN1; protein/p 99.77
1gxc_A149 CHK2, CDS1, serine/threonine-protein kinase CHK2; 99.76
2csw_A145 Ubiquitin ligase protein RNF8; 11-stranded beta sa 99.76
1lgp_A116 Cell cycle checkpoint protein CHFR; FHA, tungstate 99.76
2qa2_A499 CABE, polyketide oxygenase CABE; FAD, angucycline, 99.76
2jpe_A140 Nuclear inhibitor of protein phosphatase 1; FHA do 99.76
2qa1_A500 PGAE, polyketide oxygenase PGAE; FAD, angucycline, 99.75
1r21_A128 Antigen KI-67; beta sandwich, cell cycle; NMR {Hom 99.75
3elv_A205 PRE-mRNA leakage protein 1; intrinsically unstruct 99.75
1mzk_A139 Kinase associated protein phosphatase; beta sandwi 99.75
2kfu_A162 RV1827 PThr 22; FHA domain, phosphorylation, intra 99.75
1dmz_A158 Protein (protein kinase SPK1); beta-sandwich, anti 99.74
3oun_A157 Putative uncharacterized protein TB39.8; peptidogl 99.73
3hx1_A131 SLR1951 protein; P74513_SYNY3, adenylate cyclase-l 99.73
1k0i_A394 P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, h 99.71
1g3g_A164 Protien kinase SPK1; FHA domain, RAD53, phosphopep 99.71
1qu5_A182 Protein kinase SPK1; FHA, RAD53, transferase; NMR 99.71
3fmw_A570 Oxygenase; mithramycin, baeyer-villiger, flavin bi 99.7
1pn0_A665 Phenol 2-monooxygenase; two dimers, TLS refinement 99.7
1wln_A120 Afadin; beta sandwich, FHA domain, structural geno 99.7
1g6g_A127 Protein kinase RAD53; beta-sandwich, phosphopeptid 99.69
3ihg_A535 RDME; flavoenzyme, anthracycline, polyketide biosy 99.65
2ff4_A388 Probable regulatory protein EMBR; winged-helix, te 99.65
2r0c_A549 REBC; flavin adenine dinucleotide, monooxygenase, 99.65
2dkh_A639 3-hydroxybenzoate hydroxylase; flavoprotein, monoo 99.62
3atr_A453 Conserved archaeal protein; saturating double bond 99.59
3ihm_A430 Styrene monooxygenase A; rossman fold, anti-parall 99.57
3e1t_A512 Halogenase; flavoprotein; HET: FAD; 2.05A {Chondro 99.57
3fm8_A124 Kinesin-like protein KIF13B; kinesin, GAP, GTPase 99.56
4ejq_A154 Kinesin-like protein KIF1A; homodimer, FHA domain, 99.56
3huf_A 325 DNA repair and telomere maintenance protein NBS1; 99.54
3oz2_A397 Digeranylgeranylglycerophospholipid reductase; str 99.43
3cgv_A397 Geranylgeranyl reductase related protein; NP_39399 99.41
3i3l_A591 Alkylhalidase CMLS; flavin-dependent halogenase, c 99.38
2gmh_A584 Electron transfer flavoprotein-ubiquinone oxidored 99.37
4a0e_A123 YSCD, type III secretion protein; transport protei 99.34
3kt9_A102 Aprataxin; FHA domain, beta sandwich, beta sheet, 99.32
3uv0_A102 Mutator 2, isoform B; FHA, protein binding, dimeri 99.27
2pyx_A526 Tryptophan halogenase; structural genomics, JOI fo 99.26
3i6u_A 419 CDS1, serine/threonine-protein kinase CHK2; Ser/Th 99.2
2brf_A110 Bifunctional polynucleotide phosphatase/kinase; hy 99.18
3nix_A421 Flavoprotein/dehydrogenase; structural genomics, P 99.17
2aqj_A538 Tryptophan halogenase, pRNA; flavin-dependent halo 99.14
2weu_A511 Tryptophan 5-halogenase; regioselectivity, antifun 99.14
1yj5_C143 5' polynucleotide kinase-3' phosphatase FHA domai; 99.03
1ujx_A119 Polynucleotide kinase 3'-phosphatase; DNA repair, 99.02
2e4g_A550 Tryptophan halogenase; flavin-binding, rebeccamyci 99.01
4egx_A184 Kinesin-like protein KIF1A; FHA domain, transport 98.97
1wv3_A238 Similar to DNA segregation ATPase and related prot 98.62
2bry_A497 NEDD9 interacting protein with calponin homology a 98.34
3kkj_A336 Amine oxidase, flavin-containing; oxidoreductase, 95.6
1yvv_A336 Amine oxidase, flavin-containing; oxidoreductase, 92.79
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A* Back     alignment and structure
Probab=99.92  E-value=3.3e-24  Score=216.03  Aligned_cols=204  Identities=29%  Similarity=0.428  Sum_probs=162.0

Q ss_pred             CccCcccCCC-CcccceEEEEEEEeCCCCCCcCCcceEEEEcCCeEEEEEeCCCCeEEEEEEEeCCCCCCCCCcccHHHH
Q 014684            1 MVRKNLFGPQ-EAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERL   79 (420)
Q Consensus         1 ~VR~~l~g~~-~~~~sG~~~~rg~~~~~p~~~~~~~~~~~~g~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~l   79 (420)
                      .||+.+++.. .+.++|+.+|+++++.............|+++++++.++|+++++++|++....+.......+...+.+
T Consensus       182 ~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  261 (407)
T 3rp8_A          182 ALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVPLPAGLAEDRDTLRADL  261 (407)
T ss_dssp             SSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTCSCCTTTHHHHH
T ss_pred             HHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEEcCCCeEEEEEEeCCCcCCCCCchhHHHHH
Confidence            3778886653 678999999999865322222233456778999999999999999888876655443333455678899


Q ss_pred             HHHhcCCChHHHHHHHhcCccceeEeeecccCCCCcccCCCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhhhc
Q 014684           80 LKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKK  159 (420)
Q Consensus        80 ~~~~~~~~~~~~~li~~~~~~~~~~~~l~~~~~~~~w~~grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~~  159 (420)
                      .+.|.+|.+.+.++++.........+.++...+.++|..|||+|+|||||.|+|+.|||+|+||+||..|+++|...   
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~---  338 (407)
T 3rp8_A          262 SRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEPFSRLVRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQT---  338 (407)
T ss_dssp             HHHTTTCCHHHHHHHHHSCGGGCEEEEEEECCCCSCCEETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHHSC---
T ss_pred             HHHhcCCChHHHHHHHcCCccceeEEeeEecCCCCceecCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHhcC---
Confidence            99999999999999988776555567777776668999999999999999999999999999999999999999742   


Q ss_pred             cCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHhhhcCCCChhhhhhhccCC
Q 014684          160 SNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIP  221 (420)
Q Consensus       160 ~~~~~~~~~~~~~l~~y~~~R~~r~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~  221 (420)
                            . +.+.+|+.|+++|++++..++..++....+.+...       .+....|+..+.
T Consensus       339 ------~-~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~-------~~~~~~R~~~l~  386 (407)
T 3rp8_A          339 ------R-DIAAALREYEAQRCDRVRDLVLKARKRCDITHGKD-------MQLTEAWYQELR  386 (407)
T ss_dssp             ------C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT-------HHHHHHHHHHHH
T ss_pred             ------C-CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC-------HHHHHHHHHHHh
Confidence                  2 67999999999999999999999988887765432       235577776555
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens} Back     alignment and structure
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2 Back     alignment and structure
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A* Back     alignment and structure
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A* Back     alignment and structure
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472} Back     alignment and structure
>4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens} Back     alignment and structure
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A* Back     alignment and structure
>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B Back     alignment and structure
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa} Back     alignment and structure
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis} Back     alignment and structure
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2 Back     alignment and structure
>1uht_A Expressed protein; FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.26.1.2 Back     alignment and structure
>2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis} Back     alignment and structure
>3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} SCOP: b.26.1.0 PDB: 3poa_A* 2lc1_A Back     alignment and structure
>3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae} Back     alignment and structure
>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A Back     alignment and structure
>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A* Back     alignment and structure
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2 Back     alignment and structure
>2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2 Back     alignment and structure
>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A Back     alignment and structure
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces} Back     alignment and structure
>2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus} Back     alignment and structure
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces} Back     alignment and structure
>1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A* Back     alignment and structure
>3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A Back     alignment and structure
>2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A Back     alignment and structure
>1dmz_A Protein (protein kinase SPK1); beta-sandwich, antiparallel beta-sheets, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1fhq_A 1fhr_A* 1j4k_A* 1j4l_A* 1k2m_A* 1k2n_A* Back     alignment and structure
>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis} Back     alignment and structure
>3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP} Back     alignment and structure
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ... Back     alignment and structure
>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A* Back     alignment and structure
>1qu5_A Protein kinase SPK1; FHA, RAD53, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 Back     alignment and structure
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus} Back     alignment and structure
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A* Back     alignment and structure
>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2 Back     alignment and structure
>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2 Back     alignment and structure
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens} Back     alignment and structure
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A* Back     alignment and structure
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A* Back     alignment and structure
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A* Back     alignment and structure
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A* Back     alignment and structure
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida} Back     alignment and structure
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus} Back     alignment and structure
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A* Back     alignment and structure
>4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A Back     alignment and structure
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A* Back     alignment and structure
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum} Back     alignment and structure
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae} Back     alignment and structure
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A* Back     alignment and structure
>4a0e_A YSCD, type III secretion protein; transport protein, SAD phasing, type III secretion system; 2.04A {Yersinia pestis} PDB: 4d9v_A Back     alignment and structure
>3kt9_A Aprataxin; FHA domain, beta sandwich, beta sheet, AMP hydrolase, alternative splicing, disease mutation, DNA damage, DNA repair, DNA-binding; 1.65A {Homo sapiens} SCOP: b.26.1.0 Back     alignment and structure
>3uv0_A Mutator 2, isoform B; FHA, protein binding, dimerization; 1.90A {Drosophila melanogaster} Back     alignment and structure
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina} Back     alignment and structure
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Back     alignment and structure
>2brf_A Bifunctional polynucleotide phosphatase/kinase; hydrolase/transferase, FHA, forkhead-associated, PNKP, PNK, polynucleotide kinase 3' phosphatase; 1.40A {Homo sapiens} SCOP: b.26.1.2 PDB: 2w3o_A* 1yjm_A* Back     alignment and structure
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii} Back     alignment and structure
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A* Back     alignment and structure
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A* Back     alignment and structure
>1yj5_C 5' polynucleotide kinase-3' phosphatase FHA domai; beta sandwich, P-loop, transferase; 2.80A {Mus musculus} SCOP: b.26.1.2 Back     alignment and structure
>1ujx_A Polynucleotide kinase 3'-phosphatase; DNA repair, FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif; NMR {Mus musculus} SCOP: b.26.1.2 Back     alignment and structure
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A Back     alignment and structure
>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens} Back     alignment and structure
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4 Back     alignment and structure
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A* Back     alignment and structure
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 420
d1uhta_118 b.26.1.2 (A:) FHA domain containing protein At4G14 1e-09
d1mzka_122 b.26.1.2 (A:) Kinase associated protein phosphatas 2e-09
d3c96a1288 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Ps 1e-07
d1dmza_158 b.26.1.2 (A:) Phosphotyrosine binding domain of Ra 3e-07
d1pn0a1360 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {So 8e-07
d2piea1127 b.26.1.2 (A:13-139) Ubiquitin ligase protein RNF8 6e-06
d1g6ga_127 b.26.1.2 (A:) Phosphotyrosine binding domain of Ra 7e-06
d2affa198 b.26.1.2 (A:3-100) Antigen ki-67 {Human (Homo sapi 8e-06
d1gxca_116 b.26.1.2 (A:) Chk2 kinase {Human (Homo sapiens) [T 2e-05
d2g1la1102 b.26.1.2 (A:498-599) Kinesin-like protein kif1c {H 3e-05
d2voua1265 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydr 4e-05
d1wlna1107 b.26.1.2 (A:8-114) Afadin {Mouse (Mus musculus) [T 7e-05
>d1uhta_ b.26.1.2 (A:) FHA domain containing protein At4G14490 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 118 Back     information, alignment and structure

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: FHA domain containing protein At4G14490
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 53.5 bits (128), Expect = 1e-09
 Identities = 18/91 (19%), Positives = 28/91 (30%), Gaps = 9/91 (9%)

Query: 307 HENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEG 366
                  +G     +     I I  A +S  H RI    G + + DL S +GT +  N  
Sbjct: 30  KPGSTIRVGRIVRGN----EIAIKDAGISTKHLRIESDSGNWVIQDLGSSNGTLLNSN-- 83

Query: 367 RRYRVSSNFPARFRPSDTIEFGSDKKAIFRV 397
               +           D I+ G     +   
Sbjct: 84  ---ALDPETSVNLGDGDVIKLGEYTSILVNF 111
>d1mzka_ b.26.1.2 (A:) Kinase associated protein phosphatase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 122 Back     information, alignment and structure
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} Length = 288 Back     information, alignment and structure
>d1dmza_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 158 Back     information, alignment and structure
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} Length = 360 Back     information, alignment and structure
>d2piea1 b.26.1.2 (A:13-139) Ubiquitin ligase protein RNF8 {Human (Homo sapiens) [TaxId: 9606]} Length = 127 Back     information, alignment and structure
>d1g6ga_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 127 Back     information, alignment and structure
>d2affa1 b.26.1.2 (A:3-100) Antigen ki-67 {Human (Homo sapiens) [TaxId: 9606]} Length = 98 Back     information, alignment and structure
>d1gxca_ b.26.1.2 (A:) Chk2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 116 Back     information, alignment and structure
>d2g1la1 b.26.1.2 (A:498-599) Kinesin-like protein kif1c {Human (Homo sapiens) [TaxId: 9606]} Length = 102 Back     information, alignment and structure
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 265 Back     information, alignment and structure
>d1wlna1 b.26.1.2 (A:8-114) Afadin {Mouse (Mus musculus) [TaxId: 10090]} Length = 107 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query420
d1uhta_118 FHA domain containing protein At4G14490 {Thale cre 99.82
d2ff4a399 Probable regulatory protein EmbR, C-terminal domai 99.81
d1mzka_122 Kinase associated protein phosphatase {Thale cress 99.8
d2piea1127 Ubiquitin ligase protein RNF8 {Human (Homo sapiens 99.79
d2affa198 Antigen ki-67 {Human (Homo sapiens) [TaxId: 9606]} 99.76
d1gxca_116 Chk2 kinase {Human (Homo sapiens) [TaxId: 9606]} 99.7
d1lgpa_113 Cell cycle checkpoint protein Chfr {Human (Homo sa 99.69
d2brfa1101 Polynucleotide kinase 3'-phosphatase {Human (Homo 99.68
d1g6ga_127 Phosphotyrosine binding domain of Rad53 {Baker's y 99.67
d1dmza_158 Phosphotyrosine binding domain of Rad53 {Baker's y 99.63
d1wlna1107 Afadin {Mouse (Mus musculus) [TaxId: 10090]} 99.59
d1pn0a1360 Phenol hydroxylase {Soil-living yeast (Trichosporo 99.55
d2g1la1102 Kinesin-like protein kif1c {Human (Homo sapiens) [ 99.54
d3c96a1288 Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 99.24
d3c96a2111 Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 99.06
d2voua2128 Dihydroxypyridine hydroxylase DhpH {Arthrobacter n 98.45
d2voua1265 Dihydroxypyridine hydroxylase DhpH {Arthrobacter n 97.67
d1k0ia1292 p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a 97.21
d1b5qa1347 Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} 97.2
d2gmha1380 Electron transfer flavoprotein-ubiquinone oxidored 94.91
>d1uhta_ b.26.1.2 (A:) FHA domain containing protein At4G14490 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: FHA domain containing protein At4G14490
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.82  E-value=3e-20  Score=153.24  Aligned_cols=104  Identities=21%  Similarity=0.296  Sum_probs=82.0

Q ss_pred             eEEEEEc-CCCCcccccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEECCEEEEEEcCCCccceecC
Q 014684          285 EWFLVPS-GSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTD  363 (420)
Q Consensus       285 ~w~l~~~-~~~~~~~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~vng  363 (420)
                      .+.|+.. +...  .+.+.|.   .+..++|||....    |||+++|+.|||+||+|.++++.|+|+|++|+|||||||
T Consensus        12 ~l~L~v~~Gp~~--g~~~~l~---~~~~~~iGR~~~~----~di~l~d~~VSr~Ha~i~~~~~~~~i~Dl~S~nGT~vng   82 (118)
T d1uhta_          12 SLRLVFVKGPRE--GDALDYK---PGSTIRVGRIVRG----NEIAIKDAGISTKHLRIESDSGNWVIQDLGSSNGTLLNS   82 (118)
T ss_dssp             EEEEEESSSTTT--TCBCCBC---TTCCEEEESSSTT----CSEECCSSSSCTTCEEEEECSSSEEEECCCCSSCCEESS
T ss_pred             cEEEEEEeCCCC--CcEEEeC---CCCEEEECCCCcC----CeEEeCccCcchheeEEEEECCEEEEEECCCcceeEECC
Confidence            3444444 3332  3777776   2345889998533    999999999999999999999999999999999999999


Q ss_pred             CCCceEeecCCCcEEeCCCCEEEECCCceeEEEEEEecCCCC
Q 014684          364 NEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIGTPPN  405 (420)
Q Consensus       364 ~~~~~~~l~~~~~~~L~~Gd~i~~G~~~~~~~~~~~~~~~p~  405 (420)
                      .     +|.++++++|++||+|+||..   .+.+....+.|.
T Consensus        83 ~-----~l~~~~~~~L~~Gd~i~lG~~---~~~~v~~~~~p~  116 (118)
T d1uhta_          83 N-----ALDPETSVNLGDGDVIKLGEY---TSILVNFVSGPS  116 (118)
T ss_dssp             S-----BCCTTCEEECCTTEEEEETTT---EEEEEEEECSSC
T ss_pred             E-----EcCCCcEEECCCCCEEEECCE---EEEEEEecCCCC
Confidence            9     999989999999999999998   444433334443
>d2ff4a3 b.26.1.2 (A:284-382) Probable regulatory protein EmbR, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1mzka_ b.26.1.2 (A:) Kinase associated protein phosphatase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2piea1 b.26.1.2 (A:13-139) Ubiquitin ligase protein RNF8 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2affa1 b.26.1.2 (A:3-100) Antigen ki-67 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gxca_ b.26.1.2 (A:) Chk2 kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lgpa_ b.26.1.2 (A:) Cell cycle checkpoint protein Chfr {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2brfa1 b.26.1.2 (A:8-108) Polynucleotide kinase 3'-phosphatase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1g6ga_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1dmza_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1wlna1 b.26.1.2 (A:8-114) Afadin {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} Back     information, alignment and structure
>d2g1la1 b.26.1.2 (A:498-599) Kinesin-like protein kif1c {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d3c96a2 d.16.1.2 (A:183-293) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2voua2 d.16.1.2 (A:164-291) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} Back     information, alignment and structure
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} Back     information, alignment and structure
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure