Citrus Sinensis ID: 014698

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420
Protein Sequence
MRCLLGYEWMNRVQFRVLTVNRVKCAGLKKWVGLRIGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTRD
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHccccccHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEHHHHHHHHHHHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHEEEEEHHcccEEEEccccHHHcccccHHcccEEHHHHHHHEEEEEccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcHHHccccccccccccHHHHHcccHHHHHHEHHHcccHHHHHHHHHcHHHHHHHHcccccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEEHHccHHHHccccEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
Coil and Loop (DISEMBL)
mrcllgyeWMNRVQFRVLTVNRVKCaglkkwvglrigrrgriylkdtnllellrlPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGigegvspsaaTDLIarsipleersRAVSFVFGGLsfgsvaglllappiienlgweSVFYIFGLLGIawfsgfkilqegetsngatlaprsnyINMKKSLSASLEEMGEslkdvpwkaIFRSKAVWAMIYAHFcgswghytclswlptyfseelslnlTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLssidlglphwEIVGILTAGLALSSFALsglycthqdispEYASILLGItntvgavpGIVGVALTGYLldsthswsmslfapSIFFYLTGTIVWLAFasskpqnfstrd
Flexible Loop (DISEMBL)
mrcllgyewmnrvqfrvltvnrvkcaglkkwvglrigrrgriylkdtnlleLLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETsngatlaprsnYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFAsskpqnfstrd
Low Complexity Region (SEG)
MRCLLGYEWMNRVQFRVLTVNRVKCAGLKKWVGLrigrrgriYLKDTNllellrlpllFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGIltaglalssfalsglYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTRD
Disordered region (IsUnstruct)
**CLLGYEWMNRVQFRVLTVNRVKCAGLKKWVGLRIGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQE********************************LKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFA***********
Disordered Region (DISOPRED)
MRCLLGYEWMNRVQFRVLTVNRVKCAGLKKWVGLRIGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGET*********************************PWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNF****
Disordered Region (DISEMBL)
MRCLLGYEWMNRVQFRVLTVNRVKCAGLKKWVGLRIGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASS*********
Disordered Region (DISPRO)
MRCLLGYEWMNRVQFRVLTVNRVKCAGLKKWVGLRIGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASL*****SLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKP*******
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRCLLGYEWMNRVQFRVLTVNRVKCAGLKKWVGLRIGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTRD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	420	2.2.26 [Sep-21-2011]
Q3E9A0	517	Probable anion transporte	yes	no	0.835	0.678	0.779	1e-160
Q0IZQ3	471	Probable anion transporte	yes	no	0.847	0.755	0.739	1e-151
Q9SDI4	529	Probable anion transporte	no	no	0.804	0.638	0.390	4e-64
Q652N5	591	Probable anion transporte	no	no	0.807	0.573	0.385	7e-63
O82390	512	Sodium-dependent phosphat	no	no	0.804	0.660	0.370	5e-61
Q8GX78	541	Probable anion transporte	no	no	0.797	0.619	0.372	8e-59
Q8W0H5	519	Probable anion transporte	no	no	0.828	0.670	0.345	5e-44
Q7XJR2	512	Probable anion transporte	no	no	0.8	0.656	0.335	2e-41
Q9MZD1	495	Sialin OS=Ovis aries GN=S	N/A	no	0.833	0.707	0.329	4e-40
Q9NRA2	495	Sialin OS=Homo sapiens GN	yes	no	0.835	0.709	0.344	1e-39

>sp|Q3E9A0|ANTR6_ARATH Probable anion transporter 6, chloroplastic OS=Arabidopsis thaliana GN=ANTR6 PE=2 SV=1

 Score =  566 bits (1459), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 279/358 (77%), Positives = 312/358 (87%), Gaps = 7/358 (1%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERS 123
           RKVL+ GV  WS ATAL+PLLAGFMPGL+ SR+LVGIGEGVSPSAATDLIAR+IP++ERS
Sbjct: 165 RKVLEIGVFTWSFATALVPLLAGFMPGLIFSRILVGIGEGVSPSAATDLIARTIPVKERS 224

Query: 124 RAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGA 183
           RAV FVFGGLS GSV GLLLAPPIIE   WESVFY+FGLLG+ WF GF+ L E E S   
Sbjct: 225 RAVGFVFGGLSLGSVMGLLLAPPIIETFNWESVFYLFGLLGVGWFVGFQFLNEEEVSY-- 282

Query: 184 TLAPRSNYINM-KKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 242
               + N I+   KS +A+ EE+G SLK++PWK+ F+S AVWAMIY HFCGSWGHYTCLS
Sbjct: 283 ----KGNEISTSHKSENATKEELGSSLKEIPWKSFFQSPAVWAMIYTHFCGSWGHYTCLS 338

Query: 243 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA 302
           WLPTYFSE LSLNLTEAAWVSILPPLAS++VTS+A+QFAD LI  GV+TT VRKICQTIA
Sbjct: 339 WLPTYFSEALSLNLTEAAWVSILPPLASIVVTSLASQFADYLITNGVDTTTVRKICQTIA 398

Query: 303 FLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITN 362
           F++PA+CMTLSS+D+GLP WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITN
Sbjct: 399 FVAPAICMTLSSVDIGLPPWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITN 458

Query: 363 TVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTRD 420
           TVGAVPGIVGVALTG+LLDSTHSW+MSLF PSIFFYLTGT+VWLAFASS+PQ F   D
Sbjct: 459 TVGAVPGIVGVALTGFLLDSTHSWTMSLFVPSIFFYLTGTVVWLAFASSEPQTFRKED 516

Inorganic phosphate and probable anion transporter.
Arabidopsis thaliana (taxid: 3702)

>sp|Q0IZQ3|PHT45_ORYSJ Probable anion transporter 5, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;5 PE=2 SV=2

 Score =  536 bits (1381), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 273/369 (73%), Positives = 307/369 (83%), Gaps = 13/369 (3%)

Query: 65  KVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR 124
           +VL+ GV+ WSLATA++P +AGFMPGLVLSR+LVGIGEGVSPSAATDLIARSIP++ERSR
Sbjct: 99  RVLEIGVVAWSLATAIIPAVAGFMPGLVLSRILVGIGEGVSPSAATDLIARSIPVQERSR 158

Query: 125 AVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGAT 184
           AV+ VFGGLSFGSV GLL APPII+NLGWESVFYIFGLLGI W  GF+ L+E +      
Sbjct: 159 AVAVVFGGLSFGSVLGLLFAPPIIQNLGWESVFYIFGLLGIIWCLGFQSLKEQQLRGNED 218

Query: 185 LAPRSN-------------YINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHF 231
           +    +                  KS  +SL E+  SLKDVPW+  F+SKAVWAMIYAHF
Sbjct: 219 IQVIQDLGQSPSGSSDLISSSVSPKSSESSLGELMNSLKDVPWREFFKSKAVWAMIYAHF 278

Query: 232 CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVET 291
           CGSWGHYTCLSWLPT+FSEEL LNLTEAAWVS+LPPL S+++TSIAA FADNLI+ GV+T
Sbjct: 279 CGSWGHYTCLSWLPTFFSEELDLNLTEAAWVSVLPPLGSMIITSIAAPFADNLISNGVDT 338

Query: 292 TMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISP 351
           T VRKICQTIAFLSPA  M LSS+DLG+P WEIV  LT+GLALSSFALSGLYCTHQDIS 
Sbjct: 339 TKVRKICQTIAFLSPATFMMLSSVDLGVPPWEIVAFLTSGLALSSFALSGLYCTHQDISR 398

Query: 352 EYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASS 411
           EYASILLGITNTVGAVPGIVGVALTGYLLD+THSWS+SLFAPSIFFYLTGT VWLAFASS
Sbjct: 399 EYASILLGITNTVGAVPGIVGVALTGYLLDTTHSWSISLFAPSIFFYLTGTAVWLAFASS 458

Query: 412 KPQNFSTRD 420
           +PQ FS  +
Sbjct: 459 EPQEFSKSE 467

Probable anion transporter.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SDI4|PHT41_ORYSJ Probable anion transporter 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;1 PE=2 SV=1

 Score =  245 bits (626), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 137/351 (39%), Positives = 204/351 (58%), Gaps = 13/351 (3%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGF-MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER 122
           + VL  GV+ WS+ATAL P  A   +P L+++R  +G+GEGV+  A  +++++ +P+ ER
Sbjct: 186 KTVLGFGVIWWSIATALTPFAAKLGLPFLLVTRAFMGVGEGVAMPAMNNILSKWVPVSER 245

Query: 123 SRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNG 182
           SR+++ V+ G+  GSV GL  +P +I N GW SVFY FG LG+ WFS +           
Sbjct: 246 SRSLALVYSGMYLGSVTGLAFSPLLIHNFGWPSVFYSFGSLGVFWFSTWASKAYSSPLED 305

Query: 183 ATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 242
             ++        +K L  S    GE +K++PW  I     VWA+I +HFC +WG +  L+
Sbjct: 306 PGISAE------EKKLITSQTTGGEPVKEIPWGLILSKPPVWALIVSHFCHNWGTFILLT 359

Query: 243 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA 302
           W+PTY+++ L  NLTE+    +LP L   +  +     AD L++ G+  T VRKI Q+I 
Sbjct: 360 WMPTYYNQVLKFNLTESGLFCVLPWLTMAVSANFGGWIADTLVSRGLSVTTVRKIMQSIG 419

Query: 303 FLSPAVCMT-LSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGIT 361
           FL PA  +T LS ID   P   ++  +       +F+ SGLY  HQDI P YA +LLG++
Sbjct: 420 FLGPAFFLTQLSHID--SPAMAVL-CMACSQGTDAFSQSGLYSNHQDIGPRYAGVLLGLS 476

Query: 362 NTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSK 412
           NT G + G+ G A TGY+L    SW   +F  S+  YL GT+VW  F++ +
Sbjct: 477 NTAGVLAGVFGTAATGYILQHG-SWD-DVFKVSVVLYLVGTLVWNLFSTGE 525

Probable anion transporter.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q652N5|PHT44_ORYSJ Probable anion transporter 4, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;4 PE=2 SV=1

 Score =  241 bits (615), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 135/350 (38%), Positives = 205/350 (58%), Gaps = 11/350 (3%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGF-MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER 122
           + VL  GV+ WS+AT L PL A   +P L++ R  +GIGEGV+  A  +++++ +P+ ER
Sbjct: 248 KVVLGFGVVWWSIATVLTPLAAKIGLPFLLVMRAFMGIGEGVAMPAMNNILSKWVPVSER 307

Query: 123 SRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNG 182
           SR+++ V+ G+  GSV GL  +P +I   GW SVFY FG LG  WF+    L + +  + 
Sbjct: 308 SRSLALVYSGMYLGSVTGLAFSPLLISRFGWPSVFYAFGSLGSVWFA----LWQRKAHSS 363

Query: 183 ATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 242
            +  P  +    +  L  S   + E +  +PWK I     VWA+I +HFC +WG +  L+
Sbjct: 364 PSEDPELSKAEKRYILGGS--TLKEPVTSIPWKLILSKPPVWALIVSHFCHNWGTFILLT 421

Query: 243 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA 302
           W+PTY+++ L  NLTE+  + +LP L   +  +I    AD L+  GV  T VRKI Q+I 
Sbjct: 422 WMPTYYNQVLKFNLTESGLLCVLPWLTMAIFANIGGWIADTLVGRGVSITNVRKIMQSIG 481

Query: 303 FLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITN 362
           FL PA+ +TL S  +  P   ++  +       +F+ SGLY  HQDI P YA +LLG++N
Sbjct: 482 FLGPALFLTLLS-KVRTPAMAVL-CMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSN 539

Query: 363 TVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSK 412
           T G + G+ G A TGY+L    SW  S+F  ++  Y+ GT+VW  F++ +
Sbjct: 540 TAGVLAGVFGTAATGYILQK-GSWD-SVFQVAVVLYIVGTVVWNVFSTGE 587

Probable anion transporter.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|O82390|ANTR1_ARATH Sodium-dependent phosphate transport protein 1, chloroplastic OS=Arabidopsis thaliana GN=ANTR1 PE=1 SV=1

 Score =  235 bits (600), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 130/351 (37%), Positives = 201/351 (57%), Gaps = 13/351 (3%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGF-MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER 122
           ++VL  GV+ WS+AT L P+ A   +P L++ R  +G+GEGV+  A  +++++ +P++ER
Sbjct: 169 KRVLGFGVIWWSIATILTPVAAKLGLPYLLVVRAFMGVGEGVAMPAMNNILSKWVPVQER 228

Query: 123 SRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNG 182
           SR+++ V+ G+  GSV GL  +P +I   GW SVFY FG LG  W + +    E      
Sbjct: 229 SRSLALVYSGMYLGSVTGLAFSPFLIHQFGWPSVFYSFGSLGTVWLTLWLTKAESSPLED 288

Query: 183 ATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 242
            TL P       ++ L A      E +K +PW+ I     VWA+I  HFC +WG +  L+
Sbjct: 289 PTLLPE------ERKLIADNCASKEPVKSIPWRLILSKPPVWALISCHFCHNWGTFILLT 342

Query: 243 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA 302
           W+PTY+ + L  NL E+  +S+ P +   +  +     AD L++ G   T VRKI QTI 
Sbjct: 343 WMPTYYHQVLKFNLMESGLLSVFPWMTMAISANAGGWIADTLVSRGFSVTNVRKIMQTIG 402

Query: 303 FLSPAVCMT-LSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGIT 361
           FL PA  +T L  ID   P   ++  +       +F+ SGLY  HQDI+P Y+ +LLG++
Sbjct: 403 FLGPAFFLTQLKHID--SPTMAVL-CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLS 459

Query: 362 NTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSK 412
           NT G + G++G A TG++L    SW   +F  S+  YL GT++W  F++ +
Sbjct: 460 NTAGVLAGVLGTAATGHILQHG-SWD-DVFTISVGLYLVGTVIWNLFSTGE 508

Specific for inorganic phosphate transport across the thylakoid membrane in a sodium dependent manner. Binds glutamate but cannot transport it.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GX78|ANTR2_ARATH Probable anion transporter 2, chloroplastic OS=Arabidopsis thaliana GN=ANTR2 PE=2 SV=1

 Score =  228 bits (580), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 132/354 (37%), Positives = 199/354 (56%), Gaps = 19/354 (5%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGF-MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER 122
           + VL  GV+ WS AT + P+ A   +P L++ R  +GIGEGV+  A  +++++ IP+ ER
Sbjct: 198 KVVLGFGVVWWSFATIMTPIAARLGLPFLLVVRAFMGIGEGVAMPAMNNMLSKWIPVSER 257

Query: 123 SRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNG 182
           SR+++ V+ G+  GSV GL  +P +I   GW SVFY FG LG  WF  +         + 
Sbjct: 258 SRSLALVYSGMYLGSVTGLAFSPMLITKFGWPSVFYSFGSLGSIWFLLWLKFAYSSPKDD 317

Query: 183 ATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 242
             L+     + +  S      +  E +  +PWK I     VWA+I +HFC +WG +  L+
Sbjct: 318 PDLSEEEKKVILGGS------KPREPVTVIPWKLILSKPPVWALIISHFCHNWGTFILLT 371

Query: 243 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA 302
           W+PTY+++ L  NLTE+  + +LP L   +  +I    AD L++ G+  T VRKI Q+I 
Sbjct: 372 WMPTYYNQVLKFNLTESGLLCVLPWLTMAVFANIGGWIADTLVSRGLSITNVRKIMQSIG 431

Query: 303 FLSPAVCMTLSSIDLGLPHWEIVGILTAGLALS----SFALSGLYCTHQDISPEYASILL 358
           FL PA  ++       L H +   +    +A S    +F+ SGLY  HQDI P YA +LL
Sbjct: 432 FLGPAFFLS------QLSHVKTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLL 485

Query: 359 GITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSK 412
           G++NT G + G+ G A TGY+L    SW   +F  ++  YL GT+VW  FA+ +
Sbjct: 486 GLSNTAGVLAGVFGTAATGYILQRG-SWD-DVFKVAVALYLIGTLVWNLFATGE 537

Inorganic phosphate and probable anion transporter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8W0H5|PHT43_ORYSJ Probable anion transporter 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;3 PE=2 SV=1

 Score =  179 bits (453), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 124/359 (34%), Positives = 181/359 (50%), Gaps = 11/359 (3%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGFMPGLVLS-RVLVGIGEGVSPSAATDLIARSIPLEER 122
           ++V+  GV +WSLAT L P  A     L LS RVL+G+ EGV+  +  +++ R  P  ER
Sbjct: 164 KRVMAYGVALWSLATFLSPWAAARSLWLFLSTRVLLGMAEGVALPSMNNMVLRWFPRTER 223

Query: 123 SRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNG 182
           S AV     G   G+  GLLL+P I+   G    F IFGL G  W   +     G     
Sbjct: 224 SSAVGIAMAGFQLGNTIGLLLSPIIMSRAGIFGPFVIFGLFGFLWVLVWISAISGTPGEN 283

Query: 183 ATLAPRS-NYINMKKSLSASLEEMGESLKDVPWKAIFRSK-AVWAMIYAHFCGSWGHYTC 240
           A ++    +YI   + L  + +  GE L+ VP  +   SK   WA+I A+   SWG++  
Sbjct: 284 AQISAHELDYITRGQKLVKT-QSGGERLRKVPPFSKLLSKWPTWALISANAMHSWGYFVI 342

Query: 241 LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT 300
           LSW+P YF     +NL EAAW S LP +   ++  +A   +D LI  G   T+ RKI QT
Sbjct: 343 LSWMPVYFKTIYHVNLREAAWFSALPWVMMAVLGYVAGVVSDRLIQNGTSITLTRKIMQT 402

Query: 301 IAFLSPAVCMTLSSIDLGLPHWEIVGI--LTAGLALSSFALSGLYCTHQDISPEYASILL 358
           I F+ P V +    + L      ++    LT  + L SF  SG     Q+I+P+YA +L 
Sbjct: 403 IGFVGPGVAL----LGLNAAKSPVIASAWLTIAVGLKSFGHSGFLVNLQEIAPQYAGVLH 458

Query: 359 GITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFS 417
           G++NT G    I+G    G+ +D   S+   L   S+  Y + T+ W  FA+ +  +F 
Sbjct: 459 GMSNTAGTFAAILGTVGAGFFVDRMGSFRGFLILTSL-LYFSSTLFWDIFATGERVDFD 516

Probable anion transporter.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XJR2|ANTR3_ARATH Probable anion transporter 3, chloroplastic OS=Arabidopsis thaliana GN=ANTR3 PE=2 SV=2

 Score =  170 bits (431), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/358 (33%), Positives = 180/358 (50%), Gaps = 22/358 (6%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGFMP-GLVLSRVLVGIGEGVSPSAATDLIARSIPLEER 122
           ++VL  GV +WSLAT L P  A      L+  R   G+ EGV+  + T L++R  P++ER
Sbjct: 165 KRVLAWGVALWSLATLLTPWAAAHSTLALLCVRAFFGLAEGVAMPSMTTLLSRWFPMDER 224

Query: 123 SRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNG 182
           + AV     G   G+V GLLL P ++ ++G    F +F  LG+ W S +        S+G
Sbjct: 225 ASAVGISMAGFHMGNVVGLLLTPLMLSSIGISGPFILFASLGLLWVSTW--------SSG 276

Query: 183 ATLAPRSNYINMKKSLSASLEEMGE-------SLKDVPWKAIFRSK-AVWAMIYAHFCGS 234
            T  P+ +    +  L   L + G+       S K  P   +  SK   WA+I+A+   +
Sbjct: 277 VTNNPQDSPFITRSELR--LIQAGKPVQPSTISPKPNPSLRLLLSKLPTWAIIFANVTNN 334

Query: 235 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMV 294
           WG++  LSW+P YF    ++NL +AAW S LP     +    A   +D LI TG   T V
Sbjct: 335 WGYFVLLSWMPVYFQTVFNVNLKQAAWFSALPWATMAISGYYAGAASDFLIRTGHSVTSV 394

Query: 295 RKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYA 354
           RKI Q+I F+ P   ++L  ++           +T  L+LSSF+ +G     QDI+P+YA
Sbjct: 395 RKIMQSIGFMGPG--LSLLCLNFAKSPSCAAVFMTIALSLSSFSQAGFLLNMQDIAPQYA 452

Query: 355 SILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSK 412
             L GI+N  G +  IV    TGY +    S+  +    + F Y   T+ WL FA+ +
Sbjct: 453 GFLHGISNCAGTLAAIVSTIGTGYFVQWLGSFQ-AFLTVTAFLYFATTVFWLLFATGE 509

Inorganic phosphate and probable anion transporter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9MZD1|S17A5_SHEEP Sialin OS=Ovis aries GN=SLC17A5 PE=2 SV=1

 Score =  166 bits (419), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 178/361 (49%), Gaps = 11/361 (3%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGFMPG-LVLSRVLVGIGEGVSPSAATDLIARSIPLEER 122
           + +L  G+   ++ T   PL A F  G LV  R L G+GEGV+  A   + +   P  ER
Sbjct: 136 KLLLGFGIFATAIFTLFTPLAADFGVGALVALRALEGLGEGVTYPAMHAMWSSWAPPLER 195

Query: 123 SRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNG 182
           S+ +S  + G   G+V  L L+  I   + W  VFY FG++GI WF  +  L        
Sbjct: 196 SKLLSISYAGAQLGTVVSLPLSGVICYYMNWTYVFYFFGIVGIIWFILWICLVSDTPETH 255

Query: 183 ATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 242
            T+ P       K+ + +SL+    S K VPW  + +S  +WA++ AHF  +W  YT L+
Sbjct: 256 KTITPYE-----KEYILSSLKNQLSSQKSVPWIPMLKSLPLWAIVVAHFSYNWTFYTLLT 310

Query: 243 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT-GVETTMVRKICQTI 301
            LPTY  E L  N+ E  ++S +P L   L   ++ Q ADNL A     T  VR++   I
Sbjct: 311 LLPTYMKEVLRFNIQENGFLSAVPYLGCWLCMILSGQAADNLRARWNFSTLWVRRVFSLI 370

Query: 302 AFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGIT 361
             + PA+ +  +   +G  +   V  LT    L  F  SG    H DI+P YA ILLGIT
Sbjct: 371 GMIGPAIFLVAAGF-IGCDYSLAVAFLTISTTLGGFCSSGFSINHLDIAPSYAGILLGIT 429

Query: 362 NTVGAVPGIVGVALTGYLL--DSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTR 419
           NT   +PG++G  +   L   ++   W  ++F  +    + G I +  FA  + QN++  
Sbjct: 430 NTFATIPGMIGPIIARSLTPENTIGEWQ-TVFCIAAAINVFGAIFFTLFAKGEVQNWAIS 488

Query: 420 D 420
           D
Sbjct: 489 D 489

Primary solute translocator for anionic substances; particularly it is a free sialic acid transporter in the lysosomes (Probable). Receptor for CM101, a polysaccharide produced by group B Streptococcus with antipathoangiogenic properties.

Ovis aries (taxid: 9940)

>sp|Q9NRA2|S17A5_HUMAN Sialin OS=Homo sapiens GN=SLC17A5 PE=1 SV=2

 Score =  164 bits (415), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/360 (34%), Positives = 180/360 (50%), Gaps = 9/360 (2%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGFMPG-LVLSRVLVGIGEGVSPSAATDLIARSIPLEER 122
           + +L  G+L  ++ T   P+ A    G L++ R L G+GEGV+  A   + +   P  ER
Sbjct: 136 KMLLGFGILGTAVLTLFTPIAADLGVGPLIVLRALEGLGEGVTFPAMHAMWSSWAPPLER 195

Query: 123 SRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNG 182
           S+ +S  + G   G+V  L L+  I   + W  VFY FG +GI WF    +L     S+ 
Sbjct: 196 SKLLSISYAGAQLGTVISLPLSGIICYYMNWTYVFYFFGTIGIFWF----LLWIWLVSDT 251

Query: 183 ATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 242
                R ++   K+ + +SL     S K VPW  I +S  +WA++ AHF  +W  YT L+
Sbjct: 252 PQKHKRISHYE-KEYILSSLRNQLSSQKSVPWVPILKSLPLWAIVVAHFSYNWTFYTLLT 310

Query: 243 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT-GVETTMVRKICQTI 301
            LPTY  E L  N+ E  ++S LP L S L   ++ Q ADNL A     T  VR+I   I
Sbjct: 311 LLPTYMKEILRFNVQENGFLSSLPYLGSWLCMILSGQAADNLRAKWNFSTLCVRRIFSLI 370

Query: 302 AFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGIT 361
             + PAV +  +   +G  +   V  LT    L  F  SG    H DI+P YA ILLGIT
Sbjct: 371 GMIGPAVFLVAAGF-IGCDYSLAVAFLTISTTLGGFCSSGFSINHLDIAPSYAGILLGIT 429

Query: 362 NTVGAVPGIVGVALTGYLL-DSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTRD 420
           NT   +PG+VG  +   L  D+T     ++F  +    + G I +  FA  + QN++  D
Sbjct: 430 NTFATIPGMVGPVIAKSLTPDNTVGEWQTVFYIAAAINVFGAIFFTLFAKGEVQNWALND 489

Primary solute translocator for anionic substances; particularly it is a free sialic acid transporter in the lysosomes.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	420
224120476	543	predicted protein [Populus trichocarpa]	0.85	0.657	0.831	1e-168
359484723	526	PREDICTED: probable anion transporter 6,	0.85	0.678	0.829	1e-168
255586001	533	Inner membrane transport protein yjjL, p	0.845	0.666	0.827	1e-167
356546138	525	PREDICTED: probable anion transporter 6,	0.840	0.672	0.808	1e-164
356562936	524	PREDICTED: probable anion transporter 6,	0.833	0.667	0.810	1e-162
297812223	517	hypothetical protein ARALYDRAFT_910078 [	0.835	0.678	0.784	1e-160
357478369	541	hypothetical protein MTR_4g116030 [Medic	0.845	0.656	0.776	1e-160
224144091	535	predicted protein [Populus trichocarpa]	0.838	0.657	0.801	1e-159
42567984	517	putative anion transporter 6 [Arabidopsi	0.835	0.678	0.779	1e-159
449443273	538	PREDICTED: probable anion transporter 6,	0.847	0.661	0.758	1e-157

>gi|224120476|ref|XP_002331057.1| predicted protein [Populus trichocarpa] gi|222872987|gb|EEF10118.1| predicted protein [Populus trichocarpa]

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 300/361 (83%), Positives = 322/361 (89%), Gaps = 4/361 (1%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIAR----SIPL 119
           RKVL+ GVL WS+ATALLP LAG+MPGLVLSRVLVGIGEGVSPSAATDLIAR    SIPL
Sbjct: 183 RKVLKFGVLTWSVATALLPFLAGYMPGLVLSRVLVGIGEGVSPSAATDLIARHTLMSIPL 242

Query: 120 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGET 179
           EERSRAV+FVFGGLS GSV GLLLAPP+I+N GW SVFYIFG LG+AWF GF+ L+EG+ 
Sbjct: 243 EERSRAVAFVFGGLSVGSVIGLLLAPPLIQNFGWASVFYIFGFLGLAWFLGFQYLEEGQA 302

Query: 180 SNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYT 239
           S+ A  A R   I+M+KS S SL  +G SLKDVPWKA FR+ AVWAMIYAHFCGSWGHY 
Sbjct: 303 SHSAKPASRPQSIHMEKSFSNSLAALGGSLKDVPWKAFFRTPAVWAMIYAHFCGSWGHYN 362

Query: 240 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ 299
           CLSWLP+YFSEELSLNLTEAAWVSILPPLASV VTS AAQ ADNLIA GVETT VRKICQ
Sbjct: 363 CLSWLPSYFSEELSLNLTEAAWVSILPPLASVFVTSFAAQLADNLIANGVETTTVRKICQ 422

Query: 300 TIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLG 359
           TIAFLSPA+CMTLSS+DLGLP WEIVGILT GLALSSFALSGLYCTHQD+SPEYASILLG
Sbjct: 423 TIAFLSPALCMTLSSVDLGLPPWEIVGILTCGLALSSFALSGLYCTHQDMSPEYASILLG 482

Query: 360 ITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTR 419
           ITNTVGA+PGIVGVALTGYLLD+THSWS+SLFAPSIFFYLTGTIVWLAFASSKPQNFS  
Sbjct: 483 ITNTVGAIPGIVGVALTGYLLDTTHSWSISLFAPSIFFYLTGTIVWLAFASSKPQNFSNT 542

Query: 420 D 420
           D
Sbjct: 543 D 543

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359484723|ref|XP_002263200.2| PREDICTED: probable anion transporter 6, chloroplastic-like [Vitis vinifera]

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 296/357 (82%), Positives = 326/357 (91%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERS 123
           RKVL+ GVL WSLATAL+P+LAGFMPGLVLSR+LVGIGEGVSPSAATDLIARSIPLEERS
Sbjct: 170 RKVLEIGVLTWSLATALVPVLAGFMPGLVLSRILVGIGEGVSPSAATDLIARSIPLEERS 229

Query: 124 RAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGA 183
           RAV+FVFGGLS GSV GLLLAPP+I+N GWE+VFYIFG+LGIAWF GF+ ++E + S  A
Sbjct: 230 RAVAFVFGGLSVGSVTGLLLAPPLIQNFGWEAVFYIFGILGIAWFLGFQFVKEEQPSFVA 289

Query: 184 TLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSW 243
            L P S  I+ KKSL+ SL+++  SLKDVPWKA F+++AVWAMIY HFCGSWGHYTCLSW
Sbjct: 290 DLIPWSRTISSKKSLNTSLKDLDASLKDVPWKAFFQTRAVWAMIYTHFCGSWGHYTCLSW 349

Query: 244 LPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAF 303
           LPTYFSEEL+LNLTEAAWVS+LPPLAS+ VT+IA+Q ADNLIA GVETT VRKICQTIAF
Sbjct: 350 LPTYFSEELNLNLTEAAWVSVLPPLASIFVTTIASQLADNLIANGVETTTVRKICQTIAF 409

Query: 304 LSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNT 363
           LSPAVCMTLSS+DLG+P WEIVGILT GLALSSFALSGLYCTHQDISPEYASILLGITNT
Sbjct: 410 LSPAVCMTLSSLDLGIPPWEIVGILTGGLALSSFALSGLYCTHQDISPEYASILLGITNT 469

Query: 364 VGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTRD 420
           VGAVPGIVGVALTG LLDSTHSWS+SLFAPSIFFYLTGTIVWLAFASSKPQ+FS  D
Sbjct: 470 VGAVPGIVGVALTGSLLDSTHSWSLSLFAPSIFFYLTGTIVWLAFASSKPQSFSKID 526

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255586001|ref|XP_002533670.1| Inner membrane transport protein yjjL, putative [Ricinus communis] gi|223526438|gb|EEF28716.1| Inner membrane transport protein yjjL, putative [Ricinus communis]

 Score =  593 bits (1530), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 297/359 (82%), Positives = 324/359 (90%), Gaps = 4/359 (1%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERS 123
           RKVL+ GVL+WSLATA +PLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIAR IPLEERS
Sbjct: 177 RKVLKIGVLVWSLATAFVPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARLIPLEERS 236

Query: 124 RAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSN-- 181
           RAV+FVFGGLS GSVAGLLLAPP+I+  GWESVFYIFG LGIAWF  F+ L+E ++S   
Sbjct: 237 RAVAFVFGGLSVGSVAGLLLAPPLIQIFGWESVFYIFGFLGIAWFLTFQFLEEEQSSFAI 296

Query: 182 GATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCL 241
           G T +P+S Y  ++KS + SL E+  SLKDVPWKA F ++AVWAMIYAHFCGSWGHYTCL
Sbjct: 297 GPTASPQSTY--LEKSWNTSLPELSSSLKDVPWKAFFETRAVWAMIYAHFCGSWGHYTCL 354

Query: 242 SWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTI 301
           SWLP+YFSEEL+LNLTEAAWVSILPPLASV VTSIAAQFADNLIA GVETT VRKICQT+
Sbjct: 355 SWLPSYFSEELNLNLTEAAWVSILPPLASVFVTSIAAQFADNLIANGVETTTVRKICQTV 414

Query: 302 AFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGIT 361
           AFLSPAVCMTLSS+DLGLP WEIVGIL+ GLALSSFALSGLYCTHQDISPEYASILLGIT
Sbjct: 415 AFLSPAVCMTLSSVDLGLPPWEIVGILSGGLALSSFALSGLYCTHQDISPEYASILLGIT 474

Query: 362 NTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTRD 420
           NT GA+PGIVGVALTGYLLD+THSWS+SLFAPSIFFYLTGT+VWLA ASSKPQNFS R 
Sbjct: 475 NTAGAIPGIVGVALTGYLLDTTHSWSLSLFAPSIFFYLTGTVVWLALASSKPQNFSKRS 533

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546138|ref|XP_003541488.1| PREDICTED: probable anion transporter 6, chloroplastic-like [Glycine max]

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 288/356 (80%), Positives = 325/356 (91%), Gaps = 3/356 (0%)

Query: 66  VLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA 125
           VL+ GVLIWS+ATAL+P LAG+MPGL+LSRVLVGIGEGVSPSAATDLIARSIPLEERSRA
Sbjct: 172 VLEVGVLIWSVATALVPFLAGYMPGLLLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA 231

Query: 126 VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETS-NGAT 184
           V+ VFGGLS GSV GLLLAPP+I+NLGWESVFYIFGLLGIAWF GF++L+ GET  N  +
Sbjct: 232 VALVFGGLSVGSVMGLLLAPPLIQNLGWESVFYIFGLLGIAWFLGFQVLEGGETQLNAES 291

Query: 185 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWL 244
           L+   +   M +S   SL E+  SLKDVPWKA F+++AVWAMIYAHFCGSWGHY CLSWL
Sbjct: 292 LSSAQDI--MTQSWKTSLRELNGSLKDVPWKAFFQNRAVWAMIYAHFCGSWGHYNCLSWL 349

Query: 245 PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL 304
           PT+FSEEL+LNLTEAAWVSILPPLAS+ VTS+AAQ ADNLI+ GVETT+VRKICQ+IAFL
Sbjct: 350 PTFFSEELNLNLTEAAWVSILPPLASIFVTSLAAQLADNLISRGVETTVVRKICQSIAFL 409

Query: 305 SPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTV 364
           SPA+CMTLSS+DLGLP WEIVGILT+GLALSSFALSGLYCTHQD+SPEYASILLGITNTV
Sbjct: 410 SPAICMTLSSLDLGLPPWEIVGILTSGLALSSFALSGLYCTHQDMSPEYASILLGITNTV 469

Query: 365 GAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTRD 420
           GA+PGIVGVALTGYLLDSTHSWS+SLFAPSIFFY+TGTI+WLAFASSKPQ+FS ++
Sbjct: 470 GAIPGIVGVALTGYLLDSTHSWSISLFAPSIFFYVTGTIIWLAFASSKPQSFSEQN 525

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356562936|ref|XP_003549724.1| PREDICTED: probable anion transporter 6, chloroplastic-like [Glycine max]

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 286/353 (81%), Positives = 322/353 (91%), Gaps = 3/353 (0%)

Query: 66  VLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA 125
           VL+ GVLIWS+ATA +P ++G+MPGL+LSRVLVGIGEGVSPSAATDLIARSIPLEERSRA
Sbjct: 171 VLEVGVLIWSVATAFVPFISGYMPGLLLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA 230

Query: 126 VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETS-NGAT 184
           V+FVFGGLS GSV GLLLAPP+I+NLGWESVFYIFGLLGIAWF GF++L+ GET  N  +
Sbjct: 231 VAFVFGGLSVGSVMGLLLAPPLIQNLGWESVFYIFGLLGIAWFLGFQVLEGGETQLNAES 290

Query: 185 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWL 244
           L+  S+   M +S   SL E+  SLK+VPWKA F+++AVWAMIYAHFCGSWGHY CLSWL
Sbjct: 291 LS--SDQDTMTQSWKTSLRELNGSLKEVPWKAFFQNRAVWAMIYAHFCGSWGHYNCLSWL 348

Query: 245 PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL 304
           PT+FSEEL+LNLTEAAWVSILPPLAS+ VT +AAQ ADNLI+ GVE T+VRKICQ+IAFL
Sbjct: 349 PTFFSEELNLNLTEAAWVSILPPLASIFVTGLAAQLADNLISRGVEATVVRKICQSIAFL 408

Query: 305 SPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTV 364
           SPA+CMTLSS+DLGLP WEIVGILT+GLALSSFALSGLYCTHQD+SPEYASILLGITNTV
Sbjct: 409 SPAICMTLSSLDLGLPPWEIVGILTSGLALSSFALSGLYCTHQDMSPEYASILLGITNTV 468

Query: 365 GAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFS 417
           GAVPGIVGVALTGYLLDSTHSWS+SLFAPSIFFY+TGTIVWLAFASSKPQ+FS
Sbjct: 469 GAVPGIVGVALTGYLLDSTHSWSISLFAPSIFFYVTGTIVWLAFASSKPQSFS 521

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297812223|ref|XP_002873995.1| hypothetical protein ARALYDRAFT_910078 [Arabidopsis lyrata subsp. lyrata] gi|297319832|gb|EFH50254.1| hypothetical protein ARALYDRAFT_910078 [Arabidopsis lyrata subsp. lyrata]

 Score =  570 bits (1469), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 281/358 (78%), Positives = 313/358 (87%), Gaps = 7/358 (1%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERS 123
           RKVL+ GV  WS ATAL+PLLAGFMPGL+ SR+LVGIGEGVSPSAATDLIAR+IP++ERS
Sbjct: 165 RKVLEIGVFTWSFATALVPLLAGFMPGLIFSRILVGIGEGVSPSAATDLIARTIPVKERS 224

Query: 124 RAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGA 183
           RAV FVFGGLS GSV GLLLAPPIIE   WESVFY+FGLLG+ WF GF+ L E E S   
Sbjct: 225 RAVGFVFGGLSLGSVMGLLLAPPIIETFNWESVFYLFGLLGVGWFVGFQFLNEEEVSY-- 282

Query: 184 TLAPRSNYI-NMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 242
               + N I N  KS +A+ EE+G SLK++PWK+ F+S AVWAMIY HFCGSWGHYTCLS
Sbjct: 283 ----KGNEISNSHKSENATKEELGSSLKEIPWKSFFQSSAVWAMIYTHFCGSWGHYTCLS 338

Query: 243 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA 302
           WLPTYFSE L+LNLTEAAWVSILPPLAS++VTS+A+QFAD LI  GVETT VRKICQTIA
Sbjct: 339 WLPTYFSEALNLNLTEAAWVSILPPLASIVVTSLASQFADYLITNGVETTTVRKICQTIA 398

Query: 303 FLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITN 362
           F+SPA+CMTLSS+D+GLP WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITN
Sbjct: 399 FVSPAICMTLSSVDIGLPPWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITN 458

Query: 363 TVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTRD 420
           TVGAVPGIVGVALTG+LLDSTHSW+MSLF PSIFFYLTGT+VWLAFASS+PQ F+  D
Sbjct: 459 TVGAVPGIVGVALTGFLLDSTHSWTMSLFVPSIFFYLTGTVVWLAFASSEPQTFTKED 516

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357478369|ref|XP_003609470.1| hypothetical protein MTR_4g116030 [Medicago truncatula] gi|355510525|gb|AES91667.1| hypothetical protein MTR_4g116030 [Medicago truncatula]

 Score =  570 bits (1468), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 285/367 (77%), Positives = 320/367 (87%), Gaps = 12/367 (3%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIAR-------- 115
           R VL  GVLIWS+ATAL+P LAG+MPGL+L+R+LVGIGEGVSPSAATDLIAR        
Sbjct: 177 RNVLVVGVLIWSVATALVPFLAGYMPGLILTRILVGIGEGVSPSAATDLIARHVNIQIHF 236

Query: 116 -SIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 174
            SIPLEERSRAV+FVFGGLS GSV GLL APP+I+++GWESVFYIFGLLGIAWF GF+ L
Sbjct: 237 WSIPLEERSRAVAFVFGGLSVGSVLGLLFAPPLIQSIGWESVFYIFGLLGIAWFIGFQFL 296

Query: 175 QEGETSNGA-TLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCG 233
           +EGET   A + +P     NM +S   SL+EM  SLKDVPWKA F+S+AVWAMIYAHFCG
Sbjct: 297 EEGETRLAAESFSPAQG--NMTQSWQTSLKEMNSSLKDVPWKAFFQSRAVWAMIYAHFCG 354

Query: 234 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTM 293
           SWGHYTCLSWLPTYFS+EL LNLTEAAWVSILPPLAS+ VTSIA+Q AD+LI+ GVETT 
Sbjct: 355 SWGHYTCLSWLPTYFSQELDLNLTEAAWVSILPPLASIFVTSIASQLADSLISKGVETTT 414

Query: 294 VRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEY 353
           VRKICQ+IAFLSPA+CMTL+S+DLGLP WE+VG+LT GLALSSFALSGLYCTHQDISPEY
Sbjct: 415 VRKICQSIAFLSPALCMTLASLDLGLPPWEMVGLLTGGLALSSFALSGLYCTHQDISPEY 474

Query: 354 ASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKP 413
           ASILLGITNTVGAVPGIVGVALTGYLLD THSWS+SL+APSIFFYL+GT VWL FASSKP
Sbjct: 475 ASILLGITNTVGAVPGIVGVALTGYLLDMTHSWSISLYAPSIFFYLSGTAVWLVFASSKP 534

Query: 414 QNFSTRD 420
           Q+FS  +
Sbjct: 535 QSFSEEN 541

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224144091|ref|XP_002325183.1| predicted protein [Populus trichocarpa] gi|222866617|gb|EEF03748.1| predicted protein [Populus trichocarpa]

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 287/358 (80%), Positives = 311/358 (86%), Gaps = 6/358 (1%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERS 123
           RKVLQ GVL WS+ATALLP LAG+MPG VLSRVLVGIGEGVSPSAATDLIAR      RS
Sbjct: 183 RKVLQIGVLTWSVATALLPFLAGYMPGFVLSRVLVGIGEGVSPSAATDLIAR-----HRS 237

Query: 124 RAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGA 183
           RAV+FVFGGLS GSV GLLLAPP+I+N GW SVFYIFG LG+AWF GF+ L+EG+ S  A
Sbjct: 238 RAVAFVFGGLSVGSVTGLLLAPPLIQNFGWASVFYIFGFLGVAWFLGFQYLEEGQASFAA 297

Query: 184 TLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSW 243
               RS  I  +KS S +L E+G SLKDVPWKA F++ AVWAMIYAHFCGSWGHYTCLSW
Sbjct: 298 KPTSRSQTIYSEKSSSNALAELGGSLKDVPWKAFFQTPAVWAMIYAHFCGSWGHYTCLSW 357

Query: 244 LPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAF 303
           LP+YFSEELSLNLTEAAWVSILPPLASV VTSIAAQ AD LI+ GVE T VRKICQTIAF
Sbjct: 358 LPSYFSEELSLNLTEAAWVSILPPLASVFVTSIAAQLADKLISNGVEITTVRKICQTIAF 417

Query: 304 LSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSG-LYCTHQDISPEYASILLGITN 362
           LSPA+CMTLSS+DLGLP WEIVGILTAGLALSSFALSG LYCTHQD+SPEYASILLGITN
Sbjct: 418 LSPALCMTLSSVDLGLPPWEIVGILTAGLALSSFALSGRLYCTHQDMSPEYASILLGITN 477

Query: 363 TVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTRD 420
           TVGA+PGIVG+ LTGYLLD+THSWS++LF PSIFFYLTGTIVWLAFASSKP NFS  D
Sbjct: 478 TVGAIPGIVGIPLTGYLLDTTHSWSIALFVPSIFFYLTGTIVWLAFASSKPTNFSNTD 535

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42567984|ref|NP_197538.2| putative anion transporter 6 [Arabidopsis thaliana] gi|122214318|sp|Q3E9A0.1|ANTR6_ARATH RecName: Full=Probable anion transporter 6, chloroplastic; AltName: Full=Phosphate transporter PHT4;5; Flags: Precursor gi|332005454|gb|AED92837.1| putative anion transporter 6 [Arabidopsis thaliana]

 Score =  566 bits (1459), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 279/358 (77%), Positives = 312/358 (87%), Gaps = 7/358 (1%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERS 123
           RKVL+ GV  WS ATAL+PLLAGFMPGL+ SR+LVGIGEGVSPSAATDLIAR+IP++ERS
Sbjct: 165 RKVLEIGVFTWSFATALVPLLAGFMPGLIFSRILVGIGEGVSPSAATDLIARTIPVKERS 224

Query: 124 RAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGA 183
           RAV FVFGGLS GSV GLLLAPPIIE   WESVFY+FGLLG+ WF GF+ L E E S   
Sbjct: 225 RAVGFVFGGLSLGSVMGLLLAPPIIETFNWESVFYLFGLLGVGWFVGFQFLNEEEVSY-- 282

Query: 184 TLAPRSNYINM-KKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 242
               + N I+   KS +A+ EE+G SLK++PWK+ F+S AVWAMIY HFCGSWGHYTCLS
Sbjct: 283 ----KGNEISTSHKSENATKEELGSSLKEIPWKSFFQSPAVWAMIYTHFCGSWGHYTCLS 338

Query: 243 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA 302
           WLPTYFSE LSLNLTEAAWVSILPPLAS++VTS+A+QFAD LI  GV+TT VRKICQTIA
Sbjct: 339 WLPTYFSEALSLNLTEAAWVSILPPLASIVVTSLASQFADYLITNGVDTTTVRKICQTIA 398

Query: 303 FLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITN 362
           F++PA+CMTLSS+D+GLP WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITN
Sbjct: 399 FVAPAICMTLSSVDIGLPPWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITN 458

Query: 363 TVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTRD 420
           TVGAVPGIVGVALTG+LLDSTHSW+MSLF PSIFFYLTGT+VWLAFASS+PQ F   D
Sbjct: 459 TVGAVPGIVGVALTGFLLDSTHSWTMSLFVPSIFFYLTGTVVWLAFASSEPQTFRKED 516

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443273|ref|XP_004139404.1| PREDICTED: probable anion transporter 6, chloroplastic-like [Cucumis sativus]

 Score =  559 bits (1441), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 277/365 (75%), Positives = 318/365 (87%), Gaps = 9/365 (2%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERS 123
           RKVL+ GVL WSLATAL+P LAG+MPGL+ SRVLVGIGEGVSPSAATDLIARSIPL+ERS
Sbjct: 175 RKVLEIGVLTWSLATALVPFLAGYMPGLIFSRVLVGIGEGVSPSAATDLIARSIPLQERS 234

Query: 124 RAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNG- 182
           RAV+FVFGGLS GSV+GLLL+P +I+N GWESVFYIFG LGIAWF+GF+ L +G++S   
Sbjct: 235 RAVAFVFGGLSVGSVSGLLLSPSLIQNFGWESVFYIFGFLGIAWFAGFQFL-DGQSSGPL 293

Query: 183 ------ATLAPRSNYINMKKSLSA-SLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSW 235
                  + +   + +  KKS +   L+++  +LK+VPW+A      VWAMIYAHFCGSW
Sbjct: 294 KSISVVESESDSDSVLPKKKSTTPFKLQQLPAALKEVPWRAFLEYPPVWAMIYAHFCGSW 353

Query: 236 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVR 295
           GHYTCLSWLPTYFSEEL+LNLTEAAWVSILPPLAS+ VTSIA+Q ADNLI+ GV+TT VR
Sbjct: 354 GHYTCLSWLPTYFSEELNLNLTEAAWVSILPPLASIFVTSIASQLADNLISNGVDTTKVR 413

Query: 296 KICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYAS 355
           KICQT+AF+SPAVCMTLSS+DLGLP WE+VGILT+GLALSSFALSGLYCTHQDISPEYAS
Sbjct: 414 KICQTVAFVSPAVCMTLSSVDLGLPPWEVVGILTSGLALSSFALSGLYCTHQDISPEYAS 473

Query: 356 ILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQN 415
           +LLGITNTVGA+PGIVGVALTG+LLDSTHSWS+SLFAPSIFFYLTGTIVWL FASSKP+N
Sbjct: 474 VLLGITNTVGAIPGIVGVALTGFLLDSTHSWSISLFAPSIFFYLTGTIVWLVFASSKPKN 533

Query: 416 FSTRD 420
           FS  D
Sbjct: 534 FSKND 538

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	420
TAIR|locus:2149199	517	PHT4;5 "phosphate transporter	0.835	0.678	0.737	3.7e-142
TAIR|locus:2060694	512	PHT4;1 "AT2G29650" [Arabidopsi	0.804	0.660	0.358	6.4e-60
TAIR|locus:2126066	541	ANTR2 "AT4G00370" [Arabidopsis	0.802	0.622	0.367	3.2e-58
TAIR|locus:2065615	512	PHT4;2 "AT2G38060" [Arabidopsi	0.811	0.666	0.320	8.4e-42
UNIPROTKB|E1B7R3	495	SLC17A5 "Uncharacterized prote	0.830	0.705	0.324	1.7e-41
UNIPROTKB|Q9NRA2	495	SLC17A5 "Sialin" [Homo sapiens	0.835	0.709	0.327	5.9e-41
RGD|1311388	495	Slc17a5 "solute carrier family	0.828	0.703	0.317	2.6e-40
UNIPROTKB|E2R8R4	495	SLC17A5 "Uncharacterized prote	0.828	0.703	0.320	3.3e-40
UNIPROTKB|F1RQG9	497	SLC17A5 "Uncharacterized prote	0.828	0.700	0.318	5.3e-40
MGI|MGI:1924105	495	Slc17a5 "solute carrier family	0.828	0.703	0.314	1.4e-39

TAIR|locus:2149199 PHT4;5 "phosphate transporter 4;5" [Arabidopsis thaliana (taxid:3702)]

 Score = 1390 (494.4 bits), Expect = 3.7e-142, P = 3.7e-142
 Identities = 264/358 (73%), Positives = 297/358 (82%)

Query:    64 RKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERS 123
             RKVL+ GV  WS ATAL+PLLAGFMPGL+ SR+LVGIGEGVSPSAATDLIAR+IP++ERS
Sbjct:   165 RKVLEIGVFTWSFATALVPLLAGFMPGLIFSRILVGIGEGVSPSAATDLIARTIPVKERS 224

Query:   124 RAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGA 183
             RAV FVFGGLS GSV GLLLAPPIIE   WESVFY+FGLLG+ WF GF+ L E E S   
Sbjct:   225 RAVGFVFGGLSLGSVMGLLLAPPIIETFNWESVFYLFGLLGVGWFVGFQFLNEEEVSY-- 282

Query:   184 TLAPRSNYINMK-KSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 242
                 + N I+   KS +A+ EE+G SLK++PWK+ F+S AVWAMIY HFCGSWGHYTCLS
Sbjct:   283 ----KGNEISTSHKSENATKEELGSSLKEIPWKSFFQSPAVWAMIYTHFCGSWGHYTCLS 338

Query:   243 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA 302
             WLPTYFSE LSLNLTEAAWVSILPPLAS++VTS+A+QFAD LI  GV+TT VRKICQTIA
Sbjct:   339 WLPTYFSEALSLNLTEAAWVSILPPLASIVVTSLASQFADYLITNGVDTTTVRKICQTIA 398

Query:   303 FLSPAVCMTLSSIDLGLPHWEIVGIXXXXXXXXXXXXXXXYCTHQDISPEYASILLGITN 362
             F++PA+CMTLSS+D+GLP WEIVGI               YCTHQDISPEYASILLGITN
Sbjct:   399 FVAPAICMTLSSVDIGLPPWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITN 458

Query:   363 TVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTRD 420
             TVGAVPGIVGVALTG+LLDSTHSW+MSLF PSIFFYLTGT+VWLAFASS+PQ F   D
Sbjct:   459 TVGAVPGIVGVALTGFLLDSTHSWTMSLFVPSIFFYLTGTVVWLAFASSEPQTFRKED 516

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IDA

GO:0009536 "plastid" evidence=IDA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2060694 PHT4;1 "AT2G29650" [Arabidopsis thaliana (taxid:3702)]

 Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
 Identities = 126/351 (35%), Positives = 195/351 (55%)

Query:    64 RKVLQTGVLIWSLATALLPLLAGF-MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER 122
             ++VL  GV+ WS+AT L P+ A   +P L++ R  +G+GEGV+  A  +++++ +P++ER
Sbjct:   169 KRVLGFGVIWWSIATILTPVAAKLGLPYLLVVRAFMGVGEGVAMPAMNNILSKWVPVQER 228

Query:   123 SRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNG 182
             SR+++ V+ G+  GSV GL  +P +I   GW SVFY FG LG  W + +    E      
Sbjct:   229 SRSLALVYSGMYLGSVTGLAFSPFLIHQFGWPSVFYSFGSLGTVWLTLWLTKAESSPLED 288

Query:   183 ATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 242
              TL P       ++ L A      E +K +PW+ I     VWA+I  HFC +WG +  L+
Sbjct:   289 PTLLPE------ERKLIADNCASKEPVKSIPWRLILSKPPVWALISCHFCHNWGTFILLT 342

Query:   243 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA 302
             W+PTY+ + L  NL E+  +S+ P +   +  +     AD L++ G   T VRKI QTI 
Sbjct:   343 WMPTYYHQVLKFNLMESGLLSVFPWMTMAISANAGGWIADTLVSRGFSVTNVRKIMQTIG 402

Query:   303 FLSPAVCMT-LSSIDLGLPHWEIVGIXXXXXXXXXXXXXXXYCTHQDISPEYASILLGIT 361
             FL PA  +T L  ID   P   ++ +               Y  HQDI+P Y+ +LLG++
Sbjct:   403 FLGPAFFLTQLKHIDS--PTMAVLCMACSQGTDAFSQSGL-YSNHQDIAPRYSGVLLGLS 459

Query:   362 NTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSK 412
             NT G + G++G A TG++L    SW   +F  S+  YL GT++W  F++ +
Sbjct:   460 NTAGVLAGVLGTAATGHILQHG-SWD-DVFTISVGLYLVGTVIWNLFSTGE 508

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0009624 "response to nematode" evidence=IEP

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0030504 "inorganic diphosphate transmembrane transporter activity" evidence=IGI

GO:0009416 "response to light stimulus" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042631 "cellular response to water deprivation" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2126066 ANTR2 "AT4G00370" [Arabidopsis thaliana (taxid:3702)]

 Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
 Identities = 128/348 (36%), Positives = 190/348 (54%)

Query:    66 VLQTGVLIWSLATALLPLLAGF-MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR 124
             VL  GV+ WS AT + P+ A   +P L++ R  +GIGEGV+  A  +++++ IP+ ERSR
Sbjct:   200 VLGFGVVWWSFATIMTPIAARLGLPFLLVVRAFMGIGEGVAMPAMNNMLSKWIPVSERSR 259

Query:   125 AVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGAT 184
             +++ V+ G+  GSV GL  +P +I   GW SVFY FG LG  WF  +         +   
Sbjct:   260 SLALVYSGMYLGSVTGLAFSPMLITKFGWPSVFYSFGSLGSIWFLLWLKFAYSSPKDDPD 319

Query:   185 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWL 244
             L+        K  L  S     E +  +PWK I     VWA+I +HFC +WG +  L+W+
Sbjct:   320 LSEEEK----KVILGGSKPR--EPVTVIPWKLILSKPPVWALIISHFCHNWGTFILLTWM 373

Query:   245 PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL 304
             PTY+++ L  NLTE+  + +LP L   +  +I    AD L++ G+  T VRKI Q+I FL
Sbjct:   374 PTYYNQVLKFNLTESGLLCVLPWLTMAVFANIGGWIADTLVSRGLSITNVRKIMQSIGFL 433

Query:   305 SPAVCMTLSSIDLGLPHWEIVGIXXXXXXXXXXXXXXXYCTHQDISPEYASILLGITNTV 364
              PA  ++  S  +  P   ++ +               Y  HQDI P YA +LLG++NT 
Sbjct:   434 GPAFFLSQLS-HVKTPAMAVLCMACSQGSDAFSQSGL-YSNHQDIGPRYAGVLLGLSNTA 491

Query:   365 GAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSK 412
             G + G+ G A TGY+L    SW   +F  ++  YL GT+VW  FA+ +
Sbjct:   492 GVLAGVFGTAATGYILQRG-SWD-DVFKVAVALYLIGTLVWNLFATGE 537

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IDA

GO:0009536 "plastid" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

TAIR|locus:2065615 PHT4;2 "AT2G38060" [Arabidopsis thaliana (taxid:3702)]

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 113/353 (32%), Positives = 169/353 (47%)

Query:    64 RKVLQTGVLIWSLATALLPLLAGFMP-GLVLSRVLVGIGEGVSPSAATDLIARSIPLEER 122
             ++VL  GV +WSLAT L P  A      L+  R   G+ EGV+  + T L++R  P++ER
Sbjct:   165 KRVLAWGVALWSLATLLTPWAAAHSTLALLCVRAFFGLAEGVAMPSMTTLLSRWFPMDER 224

Query:   123 SRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSN- 181
             + AV     G   G+V GLLL P ++ ++G    F +F  LG+ W S +     G T+N 
Sbjct:   225 ASAVGISMAGFHMGNVVGLLLTPLMLSSIGISGPFILFASLGLLWVSTWS---SGVTNNP 281

Query:   182 -GATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKA-VWAMIYAHFCGSWGHYT 239
               +    RS  + + ++    ++    S K  P   +  SK   WA+I+A+   +WG++ 
Sbjct:   282 QDSPFITRSE-LRLIQA-GKPVQPSTISPKPNPSLRLLLSKLPTWAIIFANVTNNWGYFV 339

Query:   240 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ 299
              LSW+P YF    ++NL +AAW S LP     +    A   +D LI TG   T VRKI Q
Sbjct:   340 LLSWMPVYFQTVFNVNLKQAAWFSALPWATMAISGYYAGAASDFLIRTGHSVTSVRKIMQ 399

Query:   300 TIAFLSPAVCMTLSSIDLGLPHWEIVGIXXXXXXXXXXXXXXXYCTHQDISPEYASILLG 359
             +I F+ P + +   +     P    V                     QDI+P+YA  L G
Sbjct:   400 SIGFMGPGLSLLCLNFAKS-PSCAAV-FMTIALSLSSFSQAGFLLNMQDIAPQYAGFLHG 457

Query:   360 ITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSK 412
             I+N  G +  IV    TGY +    S+   L   + F Y   T+ WL FA+ +
Sbjct:   458 ISNCAGTLAAIVSTIGTGYFVQWLGSFQAFLTVTA-FLYFATTVFWLLFATGE 509

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IDA

GO:0009536 "plastid" evidence=IDA

GO:0015706 "nitrate transport" evidence=RCA

UNIPROTKB|E1B7R3 SLC17A5 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
 Identities = 116/358 (32%), Positives = 172/358 (48%)

Query:    66 VLQTGVLIWSLATALLPLLAGFMPG-LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR 124
             +L  GVL  ++ T   PL A F  G LV  R L G+GEGV+  A   + +   P  ERS+
Sbjct:   138 LLGFGVLGTAVFTLFTPLAADFGFGALVALRALEGLGEGVTFPAMHAMWSSWAPPLERSK 197

Query:   125 AVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGAT 184
              +S  + G   G+V  L L+  I   + W  VFY FGL+GI WF  +  L         T
Sbjct:   198 LLSISYAGAQLGTVVSLPLSGVICYYMNWTYVFYFFGLVGIIWFILWICLVSDTPETHKT 257

Query:   185 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWL 244
             + P       K+ + +SL+    S K VPW  + +S  +WA++ AHF  +W  YT L+ L
Sbjct:   258 ITPYE-----KEYILSSLKNQLSSQKSVPWIPMLKSLPLWAIVVAHFSYNWTFYTLLTLL 312

Query:   245 PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT-GVETTMVRKICQTIAF 303
             PTY  E L  N+ E  ++S +P L   L   ++ Q ADNL A     T  VR++   I  
Sbjct:   313 PTYMKEVLRFNIQENGFLSAVPYLGCWLCMILSGQAADNLRARWNFSTLWVRRVFSLIGM 372

Query:   304 LSPAVCMTLSSIDLGLPHWEIVGIXXXXXXXXXXXXXXXYCTHQDISPEYASILLGITNT 363
             + PA+ +  +   +G  +   V                    H DI+P YA ILLGITNT
Sbjct:   373 IGPAIFLVAAGF-IGCDYSLAVAFLTISTTLGGFCSSGFSINHLDIAPSYAGILLGITNT 431

Query:   364 VGAVPGIVGVALTGYLL-DSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTRD 420
                +PG++G  +   L  ++T     ++F  +    + G I +  FA  + QN++  D
Sbjct:   432 FATIPGMIGPIIARSLTPENTIGEWQTVFCIAAAINVFGAIFFTLFAKGEVQNWAISD 489

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

GO:0015739 "sialic acid transport" evidence=IEA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005765 "lysosomal membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9NRA2 SLC17A5 "Sialin" [Homo sapiens (taxid:9606)]

 Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
 Identities = 118/360 (32%), Positives = 174/360 (48%)

Query:    64 RKVLQTGVLIWSLATALLPLLAGFMPG-LVLSRVLVGIGEGVSPSAATDLIARSIPLEER 122
             + +L  G+L  ++ T   P+ A    G L++ R L G+GEGV+  A   + +   P  ER
Sbjct:   136 KMLLGFGILGTAVLTLFTPIAADLGVGPLIVLRALEGLGEGVTFPAMHAMWSSWAPPLER 195

Query:   123 SRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNG 182
             S+ +S  + G   G+V  L L+  I   + W  VFY FG +GI WF    +L     S+ 
Sbjct:   196 SKLLSISYAGAQLGTVISLPLSGIICYYMNWTYVFYFFGTIGIFWF----LLWIWLVSDT 251

Query:   183 ATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 242
                  R ++   K+ + +SL     S K VPW  I +S  +WA++ AHF  +W  YT L+
Sbjct:   252 PQKHKRISHYE-KEYILSSLRNQLSSQKSVPWVPILKSLPLWAIVVAHFSYNWTFYTLLT 310

Query:   243 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT-GVETTMVRKICQTI 301
              LPTY  E L  N+ E  ++S LP L S L   ++ Q ADNL A     T  VR+I   I
Sbjct:   311 LLPTYMKEILRFNVQENGFLSSLPYLGSWLCMILSGQAADNLRAKWNFSTLCVRRIFSLI 370

Query:   302 AFLSPAVCMTLSSIDLGLPHWEIVGIXXXXXXXXXXXXXXXYCTHQDISPEYASILLGIT 361
               + PAV +  +   +G  +   V                    H DI+P YA ILLGIT
Sbjct:   371 GMIGPAVFLVAAGF-IGCDYSLAVAFLTISTTLGGFCSSGFSINHLDIAPSYAGILLGIT 429

Query:   362 NTVGAVPGIVGVALTGYLL-DSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTRD 420
             NT   +PG+VG  +   L  D+T     ++F  +    + G I +  FA  + QN++  D
Sbjct:   430 NTFATIPGMVGPVIAKSLTPDNTVGEWQTVFYIAAAINVFGAIFFTLFAKGEVQNWALND 489

GO:0006865 "amino acid transport" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0030672 "synaptic vesicle membrane" evidence=IEA

GO:0016020 "membrane" evidence=TAS

GO:0005351 "sugar:hydrogen symporter activity" evidence=TAS

GO:0005765 "lysosomal membrane" evidence=IDA;TAS

GO:0015136 "sialic acid transmembrane transporter activity" evidence=IDA

GO:0015739 "sialic acid transport" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0006820 "anion transport" evidence=TAS

GO:0006811 "ion transport" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

RGD|1311388 Slc17a5 "solute carrier family 17 (anion/sugar transporter), member 5" [Rattus norvegicus (taxid:10116)]

 Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
 Identities = 114/359 (31%), Positives = 174/359 (48%)

Query:    66 VLQTGVLIWSLATALLPLLAGF-MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR 124
             +L  G+L  ++ T   PL A   +  L++ R L G+GEGV+  A   + +   P  ERS+
Sbjct:   138 LLGLGILGTAVFTLFTPLAADLGVVALIVLRALEGLGEGVTFPAMHAMWSSWAPPLERSK 197

Query:   125 AVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGAT 184
              ++  + G   G+V  L L+  I   + W  VFY+FGL+GI WF  +  +         T
Sbjct:   198 LLTISYAGAQLGTVISLPLSGIICYYMNWTYVFYLFGLVGIVWFILWMWIVSDTPETHKT 257

Query:   185 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWL 244
             +   S+Y   K+ + +SL+    S K VPW +I +S  +WA++ AHF  +W  YT L+ L
Sbjct:   258 I---SHY--EKEYIVSSLKNQLSSQKVVPWVSILKSLPLWAIVVAHFSYNWTFYTLLTLL 312

Query:   245 PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL-IATGVETTMVRKICQTIAF 303
             PTY  E L  N+ E  ++S LP     L   +  Q AD L +     T  VR+I   I  
Sbjct:   313 PTYMKEILRFNVQENGFLSALPYFGCWLCMIVCGQAADYLRVKWNFSTISVRRIFSLIGM 372

Query:   304 LSPAVCMTLSSIDLGLPHWEIVGIXXXXXXXXXXXXXXXYCTHQDISPEYASILLGITNT 363
             + PAV +  +   +G  +   V                    H DI+P YA ILLGITNT
Sbjct:   373 VGPAVFLVAAGF-IGCDYSLAVAFLTISTTLGGFASSGFSINHLDIAPSYAGILLGITNT 431

Query:   364 VGAVPGIVGVALTGYLL-DST-HSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTRD 420
                +PG++G  +   L  D+T   W  ++F  +    + G I +  FA  + QN++  D
Sbjct:   432 FATIPGMIGPIIAKSLTPDNTIKEWQ-TVFCIAAAINVFGAIFFTLFAKGEVQNWALSD 489

GO:0005764 "lysosome" evidence=IDA

GO:0005765 "lysosomal membrane" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=ISO;IDA

GO:0015739 "sialic acid transport" evidence=ISO;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA;ISO

UNIPROTKB|E2R8R4 SLC17A5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
 Identities = 115/359 (32%), Positives = 174/359 (48%)

Query:    66 VLQTGVLIWSLATALLPLLAGFMPG-LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR 124
             +L  G+L  ++ T   P+ A F  G L++ R L G+GEGV+  A   + +   P  ERS+
Sbjct:   138 LLGFGILGTAVFTLFTPIAADFGVGALIVLRALEGLGEGVTFPAMHAMWSSWAPPLERSK 197

Query:   125 AVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGAT 184
              +S  + G   G+V  L L+  I   + W  VFY+FG++GI WF  +  L         T
Sbjct:   198 LLSISYAGAQLGTVISLPLSGIICFYMNWTYVFYLFGIVGIIWFILWIFLVSETPETHKT 257

Query:   185 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWL 244
             ++ +      K+ + +SL+    S K VPW  + +S  +WA++ AHF  +W  YT L+ L
Sbjct:   258 ISRQE-----KEYILSSLKNQLSSQKSVPWIPMLKSLPLWAIVVAHFSYNWTFYTLLTLL 312

Query:   245 PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT-GVETTMVRKICQTIAF 303
             PTY  E L  N+ E   +S LP     L   ++ Q ADNL A     T  VR++   I  
Sbjct:   313 PTYMKEILRFNVQENGLLSALPYFGCWLCMILSGQAADNLRAKWNFSTICVRRVFSLIGM 372

Query:   304 LSPAVCMTLSSIDLGLPHWEIVGIXXXXXXXXXXXXXXXYCTHQDISPEYASILLGITNT 363
             + PAV +  +   +G  +   V                    H DI+P YA ILLGITNT
Sbjct:   373 IGPAVFLVAAGF-IGCDYSLAVVFLTISTTLGGFCSSGFSINHLDIAPSYAGILLGITNT 431

Query:   364 VGAVPGIVGVALTGYLL-DST-HSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTRD 420
                +PG+VG  +   L  D+T   W  ++F  +    + G I +  FA  + QN++  D
Sbjct:   432 FATIPGMVGPVIAKSLTPDNTIREWQ-TVFYIAAAINVFGAIFFSLFAKGEVQNWALDD 489

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

GO:0015739 "sialic acid transport" evidence=IEA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005765 "lysosomal membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1RQG9 SLC17A5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 115/361 (31%), Positives = 173/361 (47%)

Query:    66 VLQTGVLIWSLATALLPLLAGFMPG-LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR 124
             +L  G+L  S+ T L PL A F  G L+  R L G+GEGV+  A   + +   P  ERS+
Sbjct:   138 LLGFGILGTSVFTLLTPLAADFGVGALIALRALEGLGEGVTFPAMHAMWSSWAPPLERSK 197

Query:   125 --AVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNG 182
               ++S+   G   G+V  L L+  I   L W  VFY+FGL+GI WF  +  L        
Sbjct:   198 LLSISYAVLGAQLGTVVSLPLSGIICFYLNWTYVFYLFGLVGIIWFILWTWLVSDTPDTH 257

Query:   183 ATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 242
              T++P       K+ + +SL     S K VPW  + +S  +WA++ AHF  +W  YT L+
Sbjct:   258 RTISPYE-----KEYILSSLRNQLSSQKSVPWIPMLKSLPLWAIVVAHFSYNWTFYTLLT 312

Query:   243 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT-GVETTMVRKICQTI 301
              LPTY  E L  N+ E  ++S +P     +   ++ Q ADNL A     T  VR++   I
Sbjct:   313 LLPTYMKEVLRFNIQENGFLSAVPYFGCWVCMILSGQAADNLRAKWNFSTLCVRRVFSLI 372

Query:   302 AFLSPAVCMTLSSIDLGLPHWEIVGIXXXXXXXXXXXXXXXYCTHQDISPEYASILLGIT 361
                 PAV +  +   +G  +   V                   +H DI+P YA ILLGIT
Sbjct:   373 GMFGPAVFLVAAGF-IGCDYSLAVAFLTISTTLGGFCSSGFSISHLDIAPSYAGILLGIT 431

Query:   362 NTVGAVPGIVGVALTGYLL-DST-HSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTR 419
             NT   +PG++G  +   L  ++T   W  ++F  +    + G I +  F   + Q ++  
Sbjct:   432 NTFATIPGMIGPVIARSLTPENTIREWQ-TVFCIAAALNVFGAIFFTLFGKGEVQGWAVS 490

Query:   420 D 420
             D
Sbjct:   491 D 491

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

GO:0015739 "sialic acid transport" evidence=IEA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005765 "lysosomal membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1924105 Slc17a5 "solute carrier family 17 (anion/sugar transporter), member 5" [Mus musculus (taxid:10090)]

 Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
 Identities = 113/359 (31%), Positives = 173/359 (48%)

Query:    66 VLQTGVLIWSLATALLPLLAGF-MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR 124
             +L  G+L  S+ T   PL A   +  LV+ R L G+GEGV+  A   + +   P  ERS+
Sbjct:   138 LLGLGILGTSVFTLFTPLAADLGVVTLVVLRALEGLGEGVTFPAMHAMWSSWAPPLERSK 197

Query:   125 AVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGAT 184
              ++  + G   G+V  L L+  I   + W  VFY+FG++GI WF  +  +         T
Sbjct:   198 LLTISYAGAQLGTVISLPLSGIICYYMNWTYVFYLFGIVGIVWFILWMWIVSDTPETHKT 257

Query:   185 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWL 244
             +   S+Y   K+ + +SL+    S K VPW +I +S  +WA++ AHF  +W  YT L+ L
Sbjct:   258 I---SHY--EKEYIVSSLKNQLSSQKVVPWGSILKSLPLWAIVVAHFSYNWSFYTLLTLL 312

Query:   245 PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL-IATGVETTMVRKICQTIAF 303
             PTY  E L  N+ E  ++S LP     L   +  Q AD L +     T  VR+I   +  
Sbjct:   313 PTYMKEILRFNVQENGFLSALPYFGCWLCMILCGQAADYLRVKWNFSTISVRRIFSLVGM 372

Query:   304 LSPAVCMTLSSIDLGLPHWEIVGIXXXXXXXXXXXXXXXYCTHQDISPEYASILLGITNT 363
             + PAV +  +   +G  +   V                    H DI+P YA ILLGITNT
Sbjct:   373 VGPAVFLVAAGF-IGCDYSLAVAFLTISTTLGGFASSGFSINHLDIAPSYAGILLGITNT 431

Query:   364 VGAVPGIVGVALTGYLL-DST-HSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTRD 420
                +PG+ G  +   L  D+T   W  ++F  +    + G I +  FA  + Q+++  D
Sbjct:   432 FATIPGMTGPIIAKSLTPDNTIREWQ-TVFCIAAAINVFGAIFFTLFAKGEVQSWALSD 489

GO:0005764 "lysosome" evidence=ISO

GO:0005765 "lysosomal membrane" evidence=ISO

GO:0005886 "plasma membrane" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0006865 "amino acid transport" evidence=IEA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=ISO

GO:0015293 "symporter activity" evidence=IEA

GO:0015739 "sialic acid transport" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IDA

GO:0030054 "cell junction" evidence=IEA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0045202 "synapse" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q3E9A0	ANTR6_ARATH	No assigned EC number	0.7793	0.8357	0.6789	yes	no
Q0IZQ3	PHT45_ORYSJ	No assigned EC number	0.7398	0.8476	0.7558	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: scaffold_602135.1 annotation not avaliable (517 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	420
TIGR00894	465	TIGR00894, 2A0114euk, Na(+)-dependent inorganic ph	1e-40
TIGR00893	399	TIGR00893, 2A0114, D-galactonate transporter	1e-20
cd06174	352	cd06174, MFS, The Major Facilitator Superfamily (M	8e-19
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	4e-18
TIGR00895	398	TIGR00895, 2A0115, benzoate transport	5e-13
TIGR00880	141	TIGR00880, 2_A_01_02, Multidrug resistance protein	2e-09
TIGR00881	379	TIGR00881, 2A0104, phosphoglycerate transporter fa	1e-07
COG2814	394	COG2814, AraJ, Arabinose efflux permease [Carbohyd	2e-06
COG2271	448	COG2271, UhpC, Sugar phosphate permease [Carbohydr	2e-06
PRK11551	406	PRK11551, PRK11551, putative 3-hydroxyphenylpropio	2e-05
PRK12307	426	PRK12307, PRK12307, putative sialic acid transport	8e-04
TIGR00711	485	TIGR00711, efflux_EmrB, drug resistance transporte	0.001
PRK03699	394	PRK03699, PRK03699, putative transporter; Provisio	0.002
COG2223	417	COG2223, NarK, Nitrate/nitrite transporter [Inorga	0.002
PRK03893	496	PRK03893, PRK03893, putative sialic acid transport	0.004
TIGR00886	366	TIGR00886, 2A0108, nitrite extrusion protein (nitr	0.004

>gnl|CDD|129972 TIGR00894, 2A0114euk, Na(+)-dependent inorganic phosphate cotransporter

 Score =  149 bits (379), Expect = 1e-40
 Identities = 98/358 (27%), Positives = 168/358 (46%), Gaps = 13/358 (3%)

Query: 63  IRKVLQTGVLIWSLATALLPLLAGFMPGLVL-SRVLVGIGEGVSPSAATDLIARSIPLEE 121
            +  +  G+ + S+ + ++P  AG    LV+  RV+ G+ +G    A   +I +  P +E
Sbjct: 105 FKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE 164

Query: 122 RSRAVSFVFGGLSFGSVAGLLLAPPIIE-NLGWESVFYIFGLLGIAWFSGFKILQEGETS 180
           RSR +     G   G+   L ++  + E   GW  +FY+FG++G AW   + +    + S
Sbjct: 165 RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPS 224

Query: 181 NGATLAPRSNYINMKKSLSASL-EEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYT 239
               ++        KK +++SL  + G + + +P KAI +S  VWA+ +A F   W +  
Sbjct: 225 IHPCIS-----KFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTI 279

Query: 240 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV-ETTMVRKIC 298
             ++LPT+ S  L ++  E   +S LP L + L +  A   AD L ++     T  RKI 
Sbjct: 280 LPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIF 339

Query: 299 QTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILL 358
             I  L P +        L    +  + ILT   A+SS  L+G+     D++P +   + 
Sbjct: 340 NGIGGLGPGIFAYALPY-LSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIK 398

Query: 359 GITNTVGAVPGIVGVALTGYLL--DSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQ 414
           GIT   G + G++   L G +L  DS + W +       F  +   I +L F S++ Q
Sbjct: 399 GITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLI-MAFVNILCVIFYLIFGSAERQ 455

[Transport and binding proteins, Anions]. Length = 465

>gnl|CDD|233174 TIGR00893, 2A0114, D-galactonate transporter

 Score = 92.8 bits (231), Expect = 1e-20
 Identities = 76/346 (21%), Positives = 138/346 (39%), Gaps = 10/346 (2%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERS 123
           RK L   ++IW + T L      +   L + RVL+G  E         ++A   P  ER+
Sbjct: 59  RKTLAVFIVIWGVFTGLQAFAGAY-VSLYILRVLLGAAEAPFFPGIILIVASWFPASERA 117

Query: 124 RAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW-FSGFKILQEGETSNG 182
            AVS        G + G  L   I+ +  W+  F I G+LGI W     K + +      
Sbjct: 118 TAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAK 177

Query: 183 ATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 242
             L     YI +   L+    +   + K    K + + + VW +    F  + G    L+
Sbjct: 178 -WLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLT 236

Query: 243 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA 302
           W PTY  +E  L++ EA +++ LP +   +   +  + +D L+  G      RK   T  
Sbjct: 237 WFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARK---TAI 293

Query: 303 FLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTH-QDISPEYASIL-LGI 360
                + + + + +     +  + ++   L         +      D +P   + L  G+
Sbjct: 294 IAGLVLSLLMFATNYVNIPYAALALVA--LGFFGLGAGAIGWALISDNAPGNIAGLTGGL 351

Query: 361 TNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWL 406
            N++G + GIVG  + G +  +T S++ +L   +    +      L
Sbjct: 352 INSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYLL 397

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 399

>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

 Score = 86.6 bits (215), Expect = 8e-19
 Identities = 83/345 (24%), Positives = 134/345 (38%), Gaps = 56/345 (16%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERS 123
           R+VL  G+L+++L + LL   +     L++ R L+G+G G    AA  LIA   P +ER 
Sbjct: 64  RRVLLLGLLLFALGSLLLAFASSL-WLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERG 122

Query: 124 RAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGA 183
           RA+     G   G++ G LL   + E+LGW  +F I  +LG+                  
Sbjct: 123 RALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLL------------ 170

Query: 184 TLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSW 243
                                            +F  + +  +  A F  S+G+Y  L++
Sbjct: 171 ---------------------------------LFLLRLLLLLALAFFLLSFGYYGLLTY 197

Query: 244 LPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAF 303
           LP Y  E L L+  EA  +  L  L  +L   +    +D L          R++   I  
Sbjct: 198 LPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGR--------RRLLLLIGL 249

Query: 304 LSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNT 363
           L  A+ + L ++        +V +L  G  L     + L    +   PE      G+ NT
Sbjct: 250 LLAALGLLLLAL-APSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNT 308

Query: 364 VGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAF 408
            G++ G +G  L G LLD T  +       +    L   ++ L  
Sbjct: 309 FGSLGGALGPLLAGLLLD-TGGYGGVFLILAALALLAALLLLLLP 352

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score = 84.4 bits (209), Expect = 4e-18
 Identities = 67/309 (21%), Positives = 107/309 (34%), Gaps = 25/309 (8%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERS 123
           R+VL  G+L+++L   LL   +     L++ RVL G+G G    AA  LIA   P EER 
Sbjct: 62  RRVLLIGLLLFALGLLLLLFASSL-WLLLVLRVLQGLGGGALFPAAAALIADWFPPEERG 120

Query: 124 RAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGA 183
           RA+  +  G   G+  G LL   +    GW + F I  +L +       +L         
Sbjct: 121 RALGLLSAGFGLGAALGPLLGGLLASLFGWRAAFLILAILALLAAVLAALL--------- 171

Query: 184 TLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSW 243
                                       VP   +     V  ++ A     +  +  L++
Sbjct: 172 -------LPRPPPESKRPKPAEEAPAPLVPAWKLLLRDPVLWLLLALLLFGFAFFALLTY 224

Query: 244 LPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAF 303
           LP Y  E L L+   A  +  L  L   +   +  + +D L          R++   +  
Sbjct: 225 LPLY-QEVLGLSALLAGLLLGLAGLLGAIGRLLLGRLSDRLGRR-------RRLLLALLL 276

Query: 304 LSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNT 363
           L  A              W +V +L  G        +           E      G+ NT
Sbjct: 277 LILAALGLALLSLTESSLWLLVALLLLGFGAGLVFPALNALVSDLAPKEERGTASGLYNT 336

Query: 364 VGAVPGIVG 372
            G++ G +G
Sbjct: 337 AGSLGGALG 345

Length = 346

>gnl|CDD|233175 TIGR00895, 2A0115, benzoate transport

 Score = 69.7 bits (171), Expect = 5e-13
 Identities = 82/333 (24%), Positives = 123/333 (36%), Gaps = 32/333 (9%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERS 123
           R+VL   +L++S+ T L   LA  +  L++ R L G+G G        L++   P   R 
Sbjct: 82  RRVLLWSILLFSVFTLLC-ALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRG 140

Query: 124 RAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGI--AWFSGF------KILQ 175
            AV  +F G   G+  G  LA  +I   GW S+FY+ G+  +                L 
Sbjct: 141 TAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLV 200

Query: 176 EGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIF-------RSKAVWAMIY 228
                   T+    N I  +    A      +       +++F        ++    +  
Sbjct: 201 S---KRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWL 257

Query: 229 AHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 288
            +F    G Y   +WLP     EL  +L+ AA    L     V+ + I    AD L   G
Sbjct: 258 LYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL---G 313

Query: 289 VETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQD 348
              T +  +    A  +  V  TL S  L L    I G    G        SGLY     
Sbjct: 314 PRVTAL--LLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNG------GQSGLYALMAL 365

Query: 349 ISPEYA-SILLGITNTVGAVPGIVGVALTGYLL 380
             P    +  +G    +G +  I+G  L GYLL
Sbjct: 366 FYPTAIRATGVGWAIGIGRLGAIIGPILAGYLL 398

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 398

>gnl|CDD|233166 TIGR00880, 2_A_01_02, Multidrug resistance protein

 Score = 55.0 bits (133), Expect = 2e-09
 Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 2/114 (1%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERS 123
           + VL  G+ I+ L+TA+   L+  +  L+++R L G G   +  A   LIA   P EER 
Sbjct: 28  KPVLLVGLFIFVLSTAMF-ALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERG 86

Query: 124 RAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQE 176
            A+  +  G++ G + G  L   + + LGW + F    +L +A F     +L E
Sbjct: 87  VALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140

Length = 141

>gnl|CDD|233167 TIGR00881, 2A0104, phosphoglycerate transporter family protein

 Score = 53.1 bits (128), Expect = 1e-07
 Identities = 64/339 (18%), Positives = 109/339 (32%), Gaps = 38/339 (11%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGFMPGL---VLSRVLVGIGEGVSPSAATDLIARSIPLE 120
           R  L  G+++ ++      L  GF   L        L GI +G+        + +     
Sbjct: 60  RVFLPIGLILCAIVN----LFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRS 115

Query: 121 ERSRAVSFVFGGLSFGSVAGLLLAPPII-----ENLGWESVFYIFGLLGIAW-FSGFKIL 174
           ER   VSF     +     G  L PP++     E   W  VF + G++ I      F +L
Sbjct: 116 ERGTWVSF----WNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLL 171

Query: 175 QEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 234
           ++   S G  L P     N +    A  +E   + K +  + +  +K +W +   +    
Sbjct: 172 RDSPQSCG--LPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVY 229

Query: 235 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLI-ATGVETTM 293
                 L W P Y ++E   +  +A+W   L  L  ++ T +A   +D L         +
Sbjct: 230 VVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAV 289

Query: 294 VRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEY 353
                  ++ L   +    +          I       L      L G+           
Sbjct: 290 FFMALIIVSLLVYWLNPAAN-----PLMDLICLFALGFLVYGPQMLIGV----------- 333

Query: 354 ASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFA 392
            +  L      G   G VG     YL        +   A
Sbjct: 334 IASELAPKKAAGTAAGFVG--FFAYLGGILAGLPLGYLA 370

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 379

>gnl|CDD|225371 COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]

 Score = 49.5 bits (119), Expect = 2e-06
 Identities = 66/354 (18%), Positives = 128/354 (36%), Gaps = 40/354 (11%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERS 123
           R++L   + ++ ++  L  L   F   L+L+R L G+  GV  S A  L AR +P  +R 
Sbjct: 78  RRLLLGLLALFIVSNLLSALAPSFAV-LLLARALAGLAHGVFWSIAAALAARLVPPGKRG 136

Query: 124 RAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGA 183
           RA++ VF GL+  +V G+ L   + +  GW + F    +L +                  
Sbjct: 137 RALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLAL----------LLLWK 186

Query: 184 TLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSW 243
            L P         SL   L  +           + R   V   + A F    GH+   ++
Sbjct: 187 LLPPSEI----SGSLPGPLRTLL---------RLLRRPGVLLGLLATFLFMTGHFALYTY 233

Query: 244 LPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAF 303
           +  +       +++  + V +   +A  +   +  + AD            R+       
Sbjct: 234 IRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLAD---------RGPRRALIAALL 284

Query: 304 LSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSF--ALSGLYCTHQDISPEYASILLGIT 361
           L     + L+           + +    L   +F  AL GL      ++P+ A +   + 
Sbjct: 285 LLALALLALTF----TGASPALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLN 340

Query: 362 NTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQN 415
                +   +G AL G +LD+   ++ + +  +    L   +  L+    +   
Sbjct: 341 VAAFNLGIALGAALGGLVLDAL-GYAATGWVGAALLLLALLLALLSARKDRRTA 393

Length = 394

>gnl|CDD|225180 COG2271, UhpC, Sugar phosphate permease [Carbohydrate transport and metabolism]

 Score = 49.2 bits (118), Expect = 2e-06
 Identities = 82/352 (23%), Positives = 127/352 (36%), Gaps = 48/352 (13%)

Query: 76  LATALLPLLAGFMPGLVLSRVLVGI-----GEGVSPSAATDLIARSIPLEERSRAVSFV- 129
           + +A++ +L GF P L L  VL  +     G G  P A T  I      +ER    S   
Sbjct: 102 ILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCART--ITHWFSRKERGTWWSIWN 159

Query: 130 ----FGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW-FSGFKILQEGETSNGAT 184
                GG     VA L        + GW + FY  G++ I        +L++   S G  
Sbjct: 160 TSHNIGGALAPLVALLAF---FAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEG-- 214

Query: 185 LAPRSNYIN-MKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSW 243
           L P   Y     +      E  G +   +  K + ++K +W +  A+       Y    W
Sbjct: 215 LPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDW 274

Query: 244 LPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLI-----ATGVETTMVRKIC 298
            P Y SE    +L +A W   L  +A +  T +A   +D L         +   ++    
Sbjct: 275 GPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITAS 334

Query: 299 QTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILL 358
             + +L+P     L +I L      I+G L  G  +    L GL     +  P+ A    
Sbjct: 335 LVLYWLAPNGSYLLDAILLF-----IIGFLIYGPQM----LIGLAAA--EFVPKKA---- 379

Query: 359 GITNTVGAVPGIVGVALTGYLL-DSTHSWSMSLFAPSIFFYLTGTIVWLAFA 409
                 G   G VG  L  YL+  +     +   A   + +  G IV    A
Sbjct: 380 -----AGTATGFVG--LFAYLIGAALAGLPLGYIA-DTWGWDGGFIVLSIAA 423

Length = 448

>gnl|CDD|236927 PRK11551, PRK11551, putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 18/97 (18%)

Query: 73  IWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIA---RSIPLEERSRAVSFV 129
           ++SLATA     A   P L+++R+L G+G G    A  +LIA    ++    R  AVS +
Sbjct: 92  LFSLATAQ----AWDFPSLLVARLLTGVGLG---GALPNLIALTSEAVGPRLRGTAVSLM 144

Query: 130 FGGLSFG----SVAGLLLAPPIIENLGWESVFYIFGL 162
           + G+ FG    SV G+L A     +  W  +FY+ G+
Sbjct: 145 YCGVPFGGALASVIGVLAA----GDAAWRHIFYVGGV 177

Length = 406

>gnl|CDD|237051 PRK12307, PRK12307, putative sialic acid transporter; Provisional

 Score = 41.1 bits (96), Expect = 8e-04
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 2/93 (2%)

Query: 71  VLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF 130
           ++ +S+ T L  L +G +  L LSR +VG+G     + A+     S P   +S+A +F+ 
Sbjct: 90  IVAYSVGTGLSGLASGVIM-LTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLV 148

Query: 131 GGLSFGSVAGLLLAPPIIENLGWESVFYIFGLL 163
            G   G++      P   E  GW + F++ GLL
Sbjct: 149 SGFGIGNIIAAYFMPSFAEAYGWRAAFFV-GLL 180

Length = 426

>gnl|CDD|129794 TIGR00711, efflux_EmrB, drug resistance transporter, EmrB/QacA subfamily

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 3/98 (3%)

Query: 72  LIWSLATALLPLLAGFMPG---LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSF 128
           LI + A  L  LL G  P    +++ RV+ G G G     +   +    P E+R RA++ 
Sbjct: 71  LISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAI 130

Query: 129 VFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIA 166
               +      G  L   IIEN  W  +F I   +GI 
Sbjct: 131 WGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGII 168

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other]. Length = 485

>gnl|CDD|235151 PRK03699, PRK03699, putative transporter; Provisional

 Score = 39.9 bits (94), Expect = 0.002
 Identities = 39/201 (19%), Positives = 70/201 (34%), Gaps = 49/201 (24%)

Query: 71  VLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF 130
           +++          LA F     ++  ++G+  G++ S  T LI      E + R    +F
Sbjct: 82  MILAVAGLMFSHSLALFS----IAMFVLGVVSGITMSIGTFLITHV--YEGKQRGSRLLF 135

Query: 131 GGLSFGSVAGLLLAPPII------ENLGWESVFYIFGLLG-----IAWFSGFKILQEGET 179
              SF S+AG++   PII       ++ W  V+   GL+      +  FS F  L +   
Sbjct: 136 TD-SFFSMAGMIF--PIIAAYLLARSIEWYWVYACIGLVYVAIFILTLFSEFPALGKHAP 192

Query: 180 SNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYT 239
                                + E+ G                V  +  A         T
Sbjct: 193 KADK---------------PVAKEKWGIG--------------VLFLAIAALLYILAQLT 223

Query: 240 CLSWLPTYFSEELSLNLTEAA 260
            +SW+P Y  ++  ++L +A 
Sbjct: 224 FISWVPEYAQKKFGMSLEDAG 244

Length = 394

>gnl|CDD|225133 COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

 Score = 39.9 bits (94), Expect = 0.002
 Identities = 73/370 (19%), Positives = 132/370 (35%), Gaps = 43/370 (11%)

Query: 52  LLRLPLLFVTWI---RKVLQTGVLIWSLATALLPLLAGFMPG---LVLSRVLVGIGEGVS 105
           LLRLP  F+T     RK     +L+  +    L   A   P    L++  +L+G+  G S
Sbjct: 64  LLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGL-AFAVTYPSTWQLLVIGLLLGLA-GAS 121

Query: 106 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGI 165
            +      +   P +E+      + G  + G     L+AP +    G+ +   + G+  +
Sbjct: 122 FAVGMPNASFFFP-KEKQGLALGIAGAGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVV 180

Query: 166 AWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWA 225
           A      +   G        A                            KA+F +K  W 
Sbjct: 181 ALAIAAVLAWLGMNDVPEHRASVK------------------PQLPAQLKAVFSNKDTWL 222

Query: 226 MIYAHFCGSWGHYTCLS-WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL 284
           +   +F  ++G +   S +LP Y   +  L+   A  ++ L PL   L   +    +D +
Sbjct: 223 LSLLYF-ATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI 281

Query: 285 IATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYC 344
              G   T+         F+  A+   L S+ L         ++   + L+ F  +GL  
Sbjct: 282 --GGRRVTLAV-------FVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGN 332

Query: 345 --THQDIS---PEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYL 399
               + I    P+    + GI   +G + G       G  LD T S++ +      F+ +
Sbjct: 333 GSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLV 392

Query: 400 TGTIVWLAFA 409
              + W  +A
Sbjct: 393 ALVLTWALYA 402

Length = 417

>gnl|CDD|179668 PRK03893, PRK03893, putative sialic acid transporter; Provisional

 Score = 38.9 bits (91), Expect = 0.004
 Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 6/88 (6%)

Query: 83  LLAGFMPG---LVLSRVLVGIG-EGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSV 138
           L  GF PG   L ++R+++G+G  G   S+AT +I  S P   R++A  F+  G S G+V
Sbjct: 100 LACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVI-ESWPKHLRNKASGFLISGFSIGAV 158

Query: 139 AGLLLAPPIIENLGWESVFYIFGLLGIA 166
               +   ++   GW ++F+I G+L I 
Sbjct: 159 VAAQVYSLVVPVWGWRALFFI-GILPII 185

Length = 496

>gnl|CDD|233170 TIGR00886, 2A0108, nitrite extrusion protein (nitrite facilitator)

 Score = 38.9 bits (91), Expect = 0.004
 Identities = 51/278 (18%), Positives = 86/278 (30%), Gaps = 28/278 (10%)

Query: 52  LLRLPLLFVTWI---RKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSA 108
           +LR+ L F+      R      +L+ ++      L       L+L R+ +GI  G S ++
Sbjct: 52  VLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIA-GGSFAS 110

Query: 109 ATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL------------GWESV 156
               I+   P + +  A+    G  + G      + PPII +L            GW  V
Sbjct: 111 CMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFV 170

Query: 157 FYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKA 216
                  GI       I        GA   P            A       +L D     
Sbjct: 171 I---VPAGILLLPALLIF-----FVGADTPPGKPATGKLSFKGARWSVGTGALGDQ--LK 220

Query: 217 IFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEA-AWVSILPPLASVLVTS 275
           +FR +  W +   +           S    +F ++  L+   A A+ S+   L   L   
Sbjct: 221 VFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLG-GLLGSLARP 279

Query: 276 IAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS 313
           +    +D L            +      +   +   LS
Sbjct: 280 LGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLS 317

[Transport and binding proteins, Anions]. Length = 366

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	420
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	100.0
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	100.0
KOG2532	466	consensus Permease of the major facilitator superf	100.0
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	100.0
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	100.0
PRK10642	490	proline/glycine betaine transporter; Provisional	100.0
PRK09705	393	cynX putative cyanate transporter; Provisional	100.0
PRK11663	434	regulatory protein UhpC; Provisional	100.0
TIGR00893	399	2A0114 d-galactonate transporter.	100.0
PRK10406	432	alpha-ketoglutarate transporter; Provisional	100.0
PRK03545	390	putative arabinose transporter; Provisional	100.0
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	100.0
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	100.0
PRK09952	438	shikimate transporter; Provisional	100.0
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	100.0
PRK14995	495	methyl viologen resistance protein SmvA; Provision	100.0
PRK10091	382	MFS transport protein AraJ; Provisional	100.0
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	100.0
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	100.0
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	100.0
TIGR00900	365	2A0121 H+ Antiporter protein.	100.0
TIGR00891	405	2A0112 putative sialic acid transporter.	100.0
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	100.0
PRK10213	394	nepI ribonucleoside transporter; Reviewed	100.0
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	100.0
PRK12307	426	putative sialic acid transporter; Provisional	100.0
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	100.0
PRK15075	434	citrate-proton symporter; Provisional	100.0
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	100.0
TIGR00892	455	2A0113 monocarboxylate transporter 1.	100.0
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	100.0
PRK10489	417	enterobactin exporter EntS; Provisional	100.0
PRK03699	394	putative transporter; Provisional	99.98
TIGR00898	505	2A0119 cation transport protein.	99.98
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.98
PLN00028	476	nitrate transmembrane transporter; Provisional	99.98
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	99.98
PRK10077	479	xylE D-xylose transporter XylE; Provisional	99.98
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	99.98
TIGR00897	402	2A0118 polyol permease family. This family of prot	99.98
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.98
PRK10504	471	putative transporter; Provisional	99.97
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	99.97
PRK05122	399	major facilitator superfamily transporter; Provisi	99.97
PRK15403	413	multidrug efflux system protein MdtM; Provisional	99.97
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.97
PRK11010	491	ampG muropeptide transporter; Validated	99.97
PRK11646	400	multidrug resistance protein MdtH; Provisional	99.97
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	99.97
PRK11043	401	putative transporter; Provisional	99.97
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	99.97
PRK03893	496	putative sialic acid transporter; Provisional	99.97
PRK12382	392	putative transporter; Provisional	99.97
PRK03633	381	putative MFS family transporter protein; Provision	99.97
PRK09874	408	drug efflux system protein MdtG; Provisional	99.97
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.97
KOG0569	485	consensus Permease of the major facilitator superf	99.97
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.97
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.97
PRK11652	394	emrD multidrug resistance protein D; Provisional	99.96
PRK10133	438	L-fucose transporter; Provisional	99.96
KOG2533	495	consensus Permease of the major facilitator superf	99.96
TIGR00896	355	CynX cyanate transporter. This family of proteins	99.96
PRK15011	393	sugar efflux transporter B; Provisional	99.96
TIGR00895	398	2A0115 benzoate transport.	99.96
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.96
PRK10054	395	putative transporter; Provisional	99.96
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.96
PRK11902	402	ampG muropeptide transporter; Reviewed	99.96
KOG2504	509	consensus Monocarboxylate transporter [Carbohydrat	99.96
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.96
KOG1330	493	consensus Sugar transporter/spinster transmembrane	99.96
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	99.96
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	99.95
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	99.95
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.95
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	99.95
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.95
KOG3764	464	consensus Vesicular amine transporter [Intracellul	99.94
TIGR00901	356	2A0125 AmpG-related permease.	99.94
KOG2615	451	consensus Permease of the major facilitator superf	99.94
TIGR00805	633	oat sodium-independent organic anion transporter.	99.94
PRK09528	420	lacY galactoside permease; Reviewed	99.94
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.94
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.94
KOG0253	528	consensus Synaptic vesicle transporter SV2 (major	99.93
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.93
KOG0255	521	consensus Synaptic vesicle transporter SVOP and re	99.93
KOG0254	513	consensus Predicted transporter (major facilitator	99.93
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	99.93
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	99.92
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	99.92
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	99.92
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	99.92
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	99.91
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	99.9
KOG0252	538	consensus Inorganic phosphate transporter [Inorgan	99.89
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	99.89
PRK09584	500	tppB putative tripeptide transporter permease; Rev	99.88
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	99.88
KOG4686	459	consensus Predicted sugar transporter [Carbohydrat	99.87
PTZ00207	591	hypothetical protein; Provisional	99.86
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	99.85
TIGR00788	468	fbt folate/biopterin transporter. The only functio	99.84
PRK09669	444	putative symporter YagG; Provisional	99.83
COG2270	438	Permeases of the major facilitator superfamily [Ge	99.82
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	99.81
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.81
PF13347	428	MFS_2: MFS/sugar transport protein	99.8
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	99.78
PRK10429	473	melibiose:sodium symporter; Provisional	99.78
PRK09848	448	glucuronide transporter; Provisional	99.77
PRK11462	460	putative transporter; Provisional	99.76
KOG2563	480	consensus Permease of the major facilitator superf	99.76
COG2211	467	MelB Na+/melibiose symporter and related transport	99.69
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	99.69
KOG3626	735	consensus Organic anion transporter [Secondary met	99.67
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	99.64
KOG2816	463	consensus Predicted transporter ADD1 (major facili	99.59
PRK10054	395	putative transporter; Provisional	99.58
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.51
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	99.5
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.5
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	99.5
PRK11646	400	multidrug resistance protein MdtH; Provisional	99.49
PRK09584	500	tppB putative tripeptide transporter permease; Rev	99.47
KOG2325	488	consensus Predicted transporter/transmembrane prot	99.46
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	99.45
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.45
PRK11663	434	regulatory protein UhpC; Provisional	99.44
PRK10489	417	enterobactin exporter EntS; Provisional	99.44
PRK10504	471	putative transporter; Provisional	99.42
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	99.42
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	99.42
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	99.41
PRK14995	495	methyl viologen resistance protein SmvA; Provision	99.41
TIGR00900	365	2A0121 H+ Antiporter protein.	99.4
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	99.4
PRK03545	390	putative arabinose transporter; Provisional	99.4
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	99.4
PRK09528	420	lacY galactoside permease; Reviewed	99.39
PRK10091	382	MFS transport protein AraJ; Provisional	99.39
PRK10213	394	nepI ribonucleoside transporter; Reviewed	99.39
PRK03699	394	putative transporter; Provisional	99.39
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.38
PRK05122	399	major facilitator superfamily transporter; Provisi	99.38
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	99.38
PRK12382	392	putative transporter; Provisional	99.37
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	99.37
PRK11043	401	putative transporter; Provisional	99.36
TIGR00897	402	2A0118 polyol permease family. This family of prot	99.36
PRK09874	408	drug efflux system protein MdtG; Provisional	99.35
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	99.35
TIGR00895	398	2A0115 benzoate transport.	99.35
PRK03633	381	putative MFS family transporter protein; Provision	99.35
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	99.34
PRK11652	394	emrD multidrug resistance protein D; Provisional	99.34
PLN00028	476	nitrate transmembrane transporter; Provisional	99.32
PRK15011	393	sugar efflux transporter B; Provisional	99.32
TIGR00893	399	2A0114 d-galactonate transporter.	99.32
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	99.32
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	99.31
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.31
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.31
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.31
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.3
TIGR00891	405	2A0112 putative sialic acid transporter.	99.3
PRK15403	413	multidrug efflux system protein MdtM; Provisional	99.3
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	99.3
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	99.3
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	99.3
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	99.28
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	99.27
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	99.27
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	99.26
PRK03893	496	putative sialic acid transporter; Provisional	99.25
PRK10642	490	proline/glycine betaine transporter; Provisional	99.24
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	99.24
PRK12307	426	putative sialic acid transporter; Provisional	99.24
PRK09705	393	cynX putative cyanate transporter; Provisional	99.23
PRK11902	402	ampG muropeptide transporter; Reviewed	99.23
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	99.23
PRK10133	438	L-fucose transporter; Provisional	99.22
TIGR00892	455	2A0113 monocarboxylate transporter 1.	99.21
KOG1330	493	consensus Sugar transporter/spinster transmembrane	99.21
PRK11010	491	ampG muropeptide transporter; Validated	99.2
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.19
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	99.19
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	99.19
KOG3098	461	consensus Uncharacterized conserved protein [Funct	99.19
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.17
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	99.17
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	99.16
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.16
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	99.14
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.14
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.14
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	99.11
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.11
TIGR00901	356	2A0125 AmpG-related permease.	99.1
KOG3764	464	consensus Vesicular amine transporter [Intracellul	99.08
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	99.08
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	99.08
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	99.07
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	99.05
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	99.02
TIGR00896	355	CynX cyanate transporter. This family of proteins	99.01
PRK10077	479	xylE D-xylose transporter XylE; Provisional	99.0
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	98.99
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	98.99
KOG2615	451	consensus Permease of the major facilitator superf	98.98
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	98.98
PRK10406	432	alpha-ketoglutarate transporter; Provisional	98.96
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	98.96
PTZ00207	591	hypothetical protein; Provisional	98.95
TIGR00805	633	oat sodium-independent organic anion transporter.	98.93
PRK09669	444	putative symporter YagG; Provisional	98.88
PRK09952	438	shikimate transporter; Provisional	98.87
TIGR00898	505	2A0119 cation transport protein.	98.84
PRK10429	473	melibiose:sodium symporter; Provisional	98.82
KOG2532	466	consensus Permease of the major facilitator superf	98.81
PRK11462	460	putative transporter; Provisional	98.8
PRK15075	434	citrate-proton symporter; Provisional	98.79
TIGR00788	468	fbt folate/biopterin transporter. The only functio	98.78
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	98.77
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	98.76
KOG3810	433	consensus Micronutrient transporters (folate trans	98.74
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	98.74
PF13347	428	MFS_2: MFS/sugar transport protein	98.72
COG2270	438	Permeases of the major facilitator superfamily [Ge	98.67
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	98.67
KOG4332	454	consensus Predicted sugar transporter [Carbohydrat	98.64
PRK09848	448	glucuronide transporter; Provisional	98.63
COG2211	467	MelB Na+/melibiose symporter and related transport	98.59
KOG2533	495	consensus Permease of the major facilitator superf	98.59
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	98.56
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	98.55
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	98.51
KOG3574	510	consensus Acetyl-CoA transporter [Inorganic ion tr	98.46
KOG2504	509	consensus Monocarboxylate transporter [Carbohydrat	98.45
KOG3762	618	consensus Predicted transporter [General function	98.43
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	98.4
KOG0253	528	consensus Synaptic vesicle transporter SV2 (major	98.38
KOG0637	498	consensus Sucrose transporter and related proteins	98.38
KOG0254	513	consensus Predicted transporter (major facilitator	98.37
KOG0569	485	consensus Permease of the major facilitator superf	98.36
KOG0255	521	consensus Synaptic vesicle transporter SVOP and re	98.35
KOG2325	488	consensus Predicted transporter/transmembrane prot	98.34
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	98.28
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	98.28
PF07672	267	MFS_Mycoplasma: Mycoplasma MFS transporter; InterP	98.25
PF12832	77	MFS_1_like: MFS_1 like family	98.19
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	98.18
COG0477	338	ProP Permeases of the major facilitator superfamil	98.16
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	98.15
KOG3762	618	consensus Predicted transporter [General function	98.12
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	98.11
PF03219	491	TLC: TLC ATP/ADP transporter; InterPro: IPR004667	98.1
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	98.08
KOG3880	409	consensus Predicted small molecule transporter inv	98.05
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	98.0
PF13000	544	Acatn: Acetyl-coenzyme A transporter 1; InterPro:	97.97
KOG2816	463	consensus Predicted transporter ADD1 (major facili	97.96
KOG2563	480	consensus Permease of the major facilitator superf	97.85
TIGR00939	437	2a57 Equilibrative Nucleoside Transporter (ENT).	97.69
KOG0252	538	consensus Inorganic phosphate transporter [Inorgan	97.65
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	97.63
KOG1237	571	consensus H+/oligopeptide symporter [Amino acid tr	97.62
KOG4686	459	consensus Predicted sugar transporter [Carbohydrat	97.49
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	97.08
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	97.03
PRK03612	521	spermidine synthase; Provisional	96.99
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	96.95
KOG1479	406	consensus Nucleoside transporter [Nucleotide trans	96.89
KOG0637	498	consensus Sucrose transporter and related proteins	96.55
COG0477	338	ProP Permeases of the major facilitator superfamil	96.51
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	96.4
PF06779	85	DUF1228: Protein of unknown function (DUF1228); In	96.33
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	96.26
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	96.05
KOG3626	735	consensus Organic anion transporter [Secondary met	95.8
COG3202	509	ATP/ADP translocase [Energy production and convers	95.01
KOG4332	454	consensus Predicted sugar transporter [Carbohydrat	94.78
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	94.69
PF01733	309	Nucleoside_tran: Nucleoside transporter; InterPro:	93.91
KOG3574	510	consensus Acetyl-CoA transporter [Inorganic ion tr	93.63
KOG1237	571	consensus H+/oligopeptide symporter [Amino acid tr	93.0
KOG1479	406	consensus Nucleoside transporter [Nucleotide trans	91.83
KOG3098	461	consensus Uncharacterized conserved protein [Funct	88.9
PRK03612	521	spermidine synthase; Provisional	87.91
KOG3880	409	consensus Predicted small molecule transporter inv	87.43
KOG2601	503	consensus Iron transporter [Inorganic ion transpor	86.98
KOG3097	390	consensus Predicted membrane protein [Function unk	86.97
PF06779	85	DUF1228: Protein of unknown function (DUF1228); In	85.67
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	85.5
KOG2601	503	consensus Iron transporter [Inorganic ion transpor	84.69
PF02990	521	EMP70: Endomembrane protein 70; InterPro: IPR00424	81.49
PF05255	166	UPF0220: Uncharacterised protein family (UPF0220);	80.06

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2e-38  Score=272.99  Aligned_cols=368  Identities=16%  Similarity=0.172  Sum_probs=289.8

Q ss_pred             ccccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHh
Q 014698           36 IGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIAR  115 (420)
Q Consensus        36 ~g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~  115 (420)
                      +|-.++.+...+.++-.+.+.+.||..+|+.+..++++.++..+++++ +++.+.+.++-++.|..+|..+|.+...+++
T Consensus        66 lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gf-s~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~  144 (448)
T COG2271          66 LGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGF-SPSLFLFAVLWVLNGWFQGMGWPPCARTITH  144 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence            455555666666777899999999999999999999999999999997 8899999999999999999999999999999


Q ss_pred             cCCccccchhhHHHHhhhhhHHHHHHhhH--HHhhhccchhHHHHHHHHHHHHHHH-HhhhcccCcccCCCCcCccchhh
Q 014698          116 SIPLEERSRAVSFVFGGLSFGSVAGLLLA--PPIIENLGWESVFYIFGLLGIAWFS-GFKILQEGETSNGATLAPRSNYI  192 (420)
Q Consensus       116 ~~~~~~r~~~~~~~~~~~~~g~~~g~~l~--~~l~~~~gwr~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  192 (420)
                      |+|++|||+..++.+.+.++|..+.|++.  +++..+++||..|++.++++++..+ .++..+++|+...-.+.++..  
T Consensus       145 Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~--  222 (448)
T COG2271         145 WFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYR--  222 (448)
T ss_pred             HcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhh--
Confidence            99999999999999999999999999999  8898888999999999999988654 444555544432211111100  


Q ss_pred             hhhhhhhhhhhhhc-ccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHH
Q 014698          193 NMKKSLSASLEEMG-ESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASV  271 (420)
Q Consensus       193 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  271 (420)
                      +++.+..++.+|.+ -...+.-.+.+++||.+|.+.+..++.+..-+++..|.|.|+.|..|+|..++++..+.+..+++
T Consensus       223 ~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl  302 (448)
T COG2271         223 GDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGL  302 (448)
T ss_pred             cCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhh
Confidence            00000000000000 01112234568899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCc-HHHHHHHHHHHHHhhhhhhhhhhhhhhccC
Q 014698          272 LVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLP-HWEIVGILTAGLALSSFALSGLYCTHQDIS  350 (420)
Q Consensus       272 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  350 (420)
                      +|+++.|+++||+.+.|      |.....+.++...+++......++.+ ....+.++++|+...+.....-....+..|
T Consensus       303 ~G~Ll~GwlSDklfkgr------R~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~p  376 (448)
T COG2271         303 PGTLLAGWLSDKLFKGR------RGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVP  376 (448)
T ss_pred             HHHHHHHHHHHHhcccc------cchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhcccc
Confidence            99999999999997543      56666666776777777776666543 344455567777766556555555667788


Q ss_pred             ccchHHHHHHHHHhhhh-hHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCC
Q 014698          351 PEYASILLGITNTVGAV-PGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKP  413 (420)
Q Consensus       351 ~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (420)
                      ++..|++.|+...+.++ |.+.+....|++.|.. +|...|++..+.++++.++.....+.+++
T Consensus       377 K~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~-gW~g~Fi~~~~~a~l~~lll~~~~~~~~~  439 (448)
T COG2271         377 KKAAGTATGFVGLFAYLIGAALAGLPLGYIADTW-GWDGGFIVLSIAALLAILLLLPVWNAEER  439 (448)
T ss_pred             HhhccchhchhhhHHHHhhHHhcCCcceeeEecC-CCcchHHHHHHHHHHHHHHHHHHHhhcch
Confidence            89999999999999999 9999999999999995 89989998888777777766666554444

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.2e-36  Score=266.05  Aligned_cols=350  Identities=19%  Similarity=0.249  Sum_probs=275.7

Q ss_pred             hhhhhhhccccccchhhhhHHhHHhhhhcch---hhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccc
Q 014698           27 GLKKWVGLRIGRRGRIYLKDTNLLELLRLPL---LFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEG  103 (420)
Q Consensus        27 ~i~~~l~~~~g~~~~l~~~~~~~~~l~~~p~---~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~  103 (420)
                      ++.++++.+.+..+.+.+.+....++.++++   .+|.+|||+++..+.++.++.+++++ ++||+.++++|++.|+..|
T Consensus        38 ~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~al-Ap~f~~Ll~aR~~~g~a~G  116 (394)
T COG2814          38 PIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSAL-APSFAVLLLARALAGLAHG  116 (394)
T ss_pred             HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHH
Confidence            4478888888888877776666655555555   78899999999999999999999986 9999999999999999999


Q ss_pred             cchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHH-HHhhhcccCcccCC
Q 014698          104 VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQEGETSNG  182 (420)
Q Consensus       104 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~-~~~~~~~~~~~~~~  182 (420)
                      ..++...++..|..|++||++++++...+.+++.++|.+++.++.+.+|||..|++.+..+++.. ..+..+|  |++.+
T Consensus       117 ~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~  194 (394)
T COG2814         117 VFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEIS  194 (394)
T ss_pred             HHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCC
Confidence            99999999999999999999999999999999999999999999999999999999999998854 5666677  11111


Q ss_pred             CCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHH
Q 014698          183 ATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWV  262 (420)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  262 (420)
                      ++...                      +..+..+++|+|+++...+..++...+.+...+|+..+++|..|+|....++.
T Consensus       195 ~~~~~----------------------~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~  252 (394)
T COG2814         195 GSLPG----------------------PLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLV  252 (394)
T ss_pred             CCCCc----------------------chhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHH
Confidence            11100                      00113578999999999999999999999999999999999999999999999


Q ss_pred             HHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhh
Q 014698          263 SILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGL  342 (420)
Q Consensus       263 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  342 (420)
                      ...++++.++|+.++|++.|| +.        ++..... ....+..+..+....++........+++|+..........
T Consensus       253 Ll~~Gv~~~~Gn~~gGrl~dr-~~--------~~~l~~~-~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~  322 (394)
T COG2814         253 LLAFGIAGFIGNLLGGRLADR-GP--------RRALIAA-LLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQ  322 (394)
T ss_pred             HHHHHHHHHHHHHHHhhhccc-cc--------hhHHHHH-HHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHH
Confidence            999999999999999999999 53        3333333 2333333333334444444444445555665553333333


Q ss_pred             hhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCC
Q 014698          343 YCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKP  413 (420)
Q Consensus       343 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (420)
                      ....+ ..||.+..+.+++....++|..+|..++|.++|+. ++....++.+...+++..+.+...+++++
T Consensus       323 ~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~-g~~~~~~~~a~l~~~a~~~~~~~~~~~~~  391 (394)
T COG2814         323 TRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDAL-GYAATGWVGAALLLLALLLALLSARKDRR  391 (394)
T ss_pred             HHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-chHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            33333 55799999999999999999999999999999994 88888888777776666666555544443

>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.7e-36  Score=275.44  Aligned_cols=368  Identities=32%  Similarity=0.509  Sum_probs=300.0

Q ss_pred             HHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhh-chHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccch
Q 014698           46 DTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLA-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR  124 (420)
Q Consensus        46 ~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~  124 (420)
                      ++.++++..+++.+|+|.|+++..+.++.++++++.+..+ .+++.+++.|++||++.|..+|+...+.++|.|++||++
T Consensus        85 G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers~  164 (466)
T KOG2532|consen   85 GYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNERST  164 (466)
T ss_pred             HHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHHHHH
Confidence            3334566667779999999999999999999999988633 345678999999999999999999999999999999999


Q ss_pred             hhHHHHhhhhhHHHHHHhhHHHhhhc-cchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhhhhh
Q 014698          125 AVSFVFGGLSFGSVAGLLLAPPIIEN-LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLE  203 (420)
Q Consensus       125 ~~~~~~~~~~~g~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (420)
                      ..++..++..+|.+++.+++|++.+. +||+.+|++.++.+++..++++++..|+|.+++.-.++|.+.-.+    ...+
T Consensus       165 ~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~is~~El~~I~~----~k~~  240 (466)
T KOG2532|consen  165 FIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNISEKELKYIEK----GKSE  240 (466)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHh----cccc
Confidence            99999999999999999999999998 999999999999999988888877777666544433332211111    1111


Q ss_pred             hhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhh
Q 014698          204 EMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN  283 (420)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr  283 (420)
                      +..++.++.|++++++++.+|...+..++.+++.+.+..+.|.|+++++|+|..+.|++.++..+...+..+++|.++||
T Consensus       241 ~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~  320 (466)
T KOG2532|consen  241 AHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDR  320 (466)
T ss_pred             cccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11222267899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHH
Q 014698          284 LIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNT  363 (420)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~  363 (420)
                      +.+|.......||....++....++++...........+..+.++....+..+...........+..|++.+..+|+.+.
T Consensus       321 l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~  400 (466)
T KOG2532|consen  321 LTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINF  400 (466)
T ss_pred             HhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHH
Confidence            98876667777999999998888888887776655444455555555666666666666666666588999999999999


Q ss_pred             hhhhhHHHHHHHHHHHhcc--CCceeeeehhhhHHHHHHHHHHhhhccCCCCCCCCC
Q 014698          364 VGAVPGIVGVALTGYLLDS--THSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFST  418 (420)
Q Consensus       364 ~~~~g~~~~~~~~g~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (420)
                      ...+.+.++|.+.|.+...  ..+|+..|++.+++.++.. +.+.++-+.++++|++
T Consensus       401 ~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~-i~f~~f~s~e~~~w~~  456 (466)
T KOG2532|consen  401 VGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGN-IIFLFFGSGEPAPWTK  456 (466)
T ss_pred             HHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhc-hheeEeecCcccCccC
Confidence            9999999999999999942  2478999999887666555 4555555666666654

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=100.00  E-value=2.9e-35  Score=276.06  Aligned_cols=367  Identities=12%  Similarity=0.043  Sum_probs=251.6

Q ss_pred             hhhhhccccccchh---hhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh----hchHHHHHHHHHHHHhc
Q 014698           29 KKWVGLRIGRRGRI---YLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL----AGFMPGLVLSRVLVGIG  101 (420)
Q Consensus        29 ~~~l~~~~g~~~~l---~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~r~l~G~~  101 (420)
                      .++++.+..+.+.+   +...+.+++++.+++.||+++||++..+.+++++.....+..    +++++.+++.|+++|++
T Consensus        56 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~  135 (467)
T PRK09556         56 ISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFF  135 (467)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH
Confidence            44555444344433   344445567888888999999999999888888777766542    58899999999999999


Q ss_pred             cccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhcc---chhHHHHHHHHHHHHHHHHhhhc-ccC
Q 014698          102 EGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL---GWESVFYIFGLLGIAWFSGFKIL-QEG  177 (420)
Q Consensus       102 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~---gwr~~f~~~~~~~~~~~~~~~~~-~~~  177 (420)
                      .+...|...++++||+|+++|++++|+...+.++|.++++.+..++.+..   +||..|.+.+++.++..+..+++ +++
T Consensus       136 ~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~  215 (467)
T PRK09556        136 QSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDS  215 (467)
T ss_pred             HhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999999999999999999987776653   69999998888877654444444 444


Q ss_pred             cccCCCCcCccchhhhhhhhhhhhhhhhcccccccc--hhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCC
Q 014698          178 ETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVP--WKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLN  255 (420)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  255 (420)
                      |++.+ ..++++ ...+..+..+...+ .++....+  .++.+|+|.+|...+..++.....++...|.|.|+++.+|+|
T Consensus       216 p~~~~-~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s  292 (467)
T PRK09556        216 PEELG-WGKAEE-IFGEPISEEDKETE-STDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFS  292 (467)
T ss_pred             hhhcC-CCChhh-cccCccchhhhccc-cccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence            32211 111110 00000000000000 00000001  123788999999999988888888888899999999989999


Q ss_pred             cchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhh
Q 014698          256 LTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALS  335 (420)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  335 (420)
                      ..+++...+...++.+++.++.|+++||+++|       +................... ..++.....+..+..|.+..
T Consensus       293 ~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r-------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~G~~~~  364 (467)
T PRK09556        293 KEDAINTFTLFEIGALVGSLLWGWLSDLANGR-------RALVACIALALIIFTLGVYQ-HATSEYMYLASLFALGFLVF  364 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------chHHHHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999976       22222111111111111111 12223233344455554332


Q ss_pred             hhhhhhhhhhhhccCccchHHHHHHHHHhhhh-hHHHHHHHHHHHhc------------cCCceeeeehhhhHHHHHHHH
Q 014698          336 SFALSGLYCTHQDISPEYASILLGITNTVGAV-PGIVGVALTGYLLD------------STHSWSMSLFAPSIFFYLTGT  402 (420)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~------------~~~~~~~~~~~~~~~~~~~~~  402 (420)
                      ...........+..|++++|++.|+.+...++ |++++|.+.|.+.|            .. +|+..|.+..++.+++.+
T Consensus       365 ~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~-~~~~~f~~~~~~~~~~~~  443 (467)
T PRK09556        365 GPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLT-GWAGTFAALDIAAIGCIC  443 (467)
T ss_pred             hHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccccccccc-ChHHHHHHHHHHHHHHHH
Confidence            22222223445778899999999999999997 77999999999999            33 588888887666666555


Q ss_pred             HHhhh
Q 014698          403 IVWLA  407 (420)
Q Consensus       403 ~~~~~  407 (420)
                      ..+..
T Consensus       444 ~~~~~  448 (467)
T PRK09556        444 LMAIV  448 (467)
T ss_pred             HHHHH
Confidence            54443

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=100.00  E-value=1.3e-34  Score=272.17  Aligned_cols=370  Identities=24%  Similarity=0.362  Sum_probs=262.1

Q ss_pred             hhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh-hchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccc
Q 014698           43 YLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL-AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE  121 (420)
Q Consensus        43 ~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~  121 (420)
                      +.....++++..+++.||+++|+++..+.++++++++++.+. .++++.+++.|+++|++.+...|....+++|++|+++
T Consensus        85 ~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~  164 (465)
T TIGR00894        85 HFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE  164 (465)
T ss_pred             HHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH
Confidence            334455567778888999999999999999999988876531 3567889999999999999999999999999999999


Q ss_pred             cchhhHHHHhhhhhHHHHHHhhHHHhhhcc-chhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhh
Q 014698          122 RSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSA  200 (420)
Q Consensus       122 r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (420)
                      |++++++...+..+|.+++|++++.+.+.+ |||+.|++.++.+++..+.++.+++++|+++++..+++.+.     ..+
T Consensus       165 r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-----i~~  239 (465)
T TIGR00894       165 RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKY-----INS  239 (465)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHH-----HHh
Confidence            999999999999999999999999999884 99999999999888776666665554443222211111100     000


Q ss_pred             hh-hhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhh
Q 014698          201 SL-EEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQ  279 (420)
Q Consensus       201 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~  279 (420)
                      .. ++..+..++.++++++++|.+|...+..++.....+.+..|+|.|+++.+|++..+.++..+...++..++.++.|+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~  319 (465)
T TIGR00894       240 SLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGY  319 (465)
T ss_pred             hcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHH
Confidence            00 01111123446889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhcCcchHHH-HHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHH
Q 014698          280 FADNLIATGVETTMV-RKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILL  358 (420)
Q Consensus       280 l~dr~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~  358 (420)
                      ++||+++|+...... ++.....+................+.......+.+.+.+.+ ...........+..|+.+|.+.
T Consensus       320 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~g~~~  398 (465)
T TIGR00894       320 LADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSS-GPLAGVLINSLDLAPRFLGFIK  398 (465)
T ss_pred             HHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhhhhchhhcChhHHHHHH
Confidence            999998765432221 22222222222222222222212222222222333333333 2222333334455667999999


Q ss_pred             HHHHHhhhhhHHHHHHHHHHHhccC--CceeeeehhhhHHHHHHHHHHhhhccCCCCCCCCCC
Q 014698          359 GITNTVGAVPGIVGVALTGYLLDST--HSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTR  419 (420)
Q Consensus       359 g~~~~~~~~g~~~~~~~~g~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (420)
                      |+.+....+++.++|.+.|.+.|..  ++|...|.+.++..+++.++. ....+.++++|+++
T Consensus       399 g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~-~~~~~~~~~~w~~~  460 (465)
T TIGR00894       399 GITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFY-LIFGSAERQDWAKE  460 (465)
T ss_pred             HHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHe-eeeecceecCCCCC
Confidence            9999999999999999999988753  457777777766555554443 34555666666544

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=100.00  E-value=6.1e-34  Score=268.39  Aligned_cols=346  Identities=16%  Similarity=0.103  Sum_probs=235.3

Q ss_pred             HHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHH--------HHHHHHHHHhccccchhhhHHHHHhcC
Q 014698           46 DTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPG--------LVLSRVLVGIGEGVSPSAATDLIARSI  117 (420)
Q Consensus        46 ~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~  117 (420)
                      ...+++++.+++.||+||||++..+.++++++++++++ ++|++.        ++++|+++|++.|..++...++++|++
T Consensus        69 ~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~-~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~  147 (490)
T PRK10642         69 IRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGL-IPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYS  147 (490)
T ss_pred             HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhC
Confidence            34567999999999999999999999999999999986 888764        899999999999999999999999999


Q ss_pred             CccccchhhHHHHhhhhhHHHHHHhhHHHhh--------hccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccc
Q 014698          118 PLEERSRAVSFVFGGLSFGSVAGLLLAPPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRS  189 (420)
Q Consensus       118 ~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (420)
                      |+++|+++.++...+..+|..+|+.+...+.        +.+|||+.|++.++++++..+....+||+++..+.+++.++
T Consensus       148 p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~  227 (490)
T PRK10642        148 PDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQ  227 (490)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhh
Confidence            9999999999999988889888887665443        25799999999877666555555667776553211100000


Q ss_pred             hhhhhhhhhhhhhhhhcccccccchhhhhhc-HHHHH-HHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhH
Q 014698          190 NYINMKKSLSASLEEMGESLKDVPWKAIFRS-KAVWA-MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPP  267 (420)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  267 (420)
                      ..           ++..++.++.++++++++ ++.+. .....++....++....+.|.|+++.+|++..+.+.......
T Consensus       228 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~  296 (490)
T PRK10642        228 GD-----------REGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIM  296 (490)
T ss_pred             hc-----------cccccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence            00           000011123345566653 23222 233334456677888889999998888998888887777888


Q ss_pred             HHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHH-hhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhh
Q 014698          268 LASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS-SIDLGLPHWEIVGILTAGLALSSFALSGLYCTH  346 (420)
Q Consensus       268 ~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  346 (420)
                      ++.+++.++.|+++||+|||        +................. ....++........++.+++.+...........
T Consensus       297 ~~~~~~~~~~g~l~dr~grr--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~  368 (490)
T PRK10642        297 IGMLFVQPVMGLLSDRFGRR--------PFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLP  368 (490)
T ss_pred             HHHHHHHHHHHHHHHHhccH--------HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88999999999999999974        222222221121111111 112222233333344445544434344444555


Q ss_pred             hccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCC
Q 014698          347 QDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSK  412 (420)
Q Consensus       347 ~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (420)
                      +.+|++.|+++.|+.+....+++.++|.+.+++.+..+++..+++...+..+++.+..++ .+|++
T Consensus       369 ~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~-~pes~  433 (490)
T PRK10642        369 AMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVT-MKETA  433 (490)
T ss_pred             HHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH-hcccc
Confidence            678999999999987777778889999999999887555554444444444444444333 34443

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=100.00  E-value=4.8e-34  Score=261.78  Aligned_cols=354  Identities=14%  Similarity=0.107  Sum_probs=264.4

Q ss_pred             hhhhhhccccccchhhh---hHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhcccc
Q 014698           28 LKKWVGLRIGRRGRIYL---KDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGV  104 (420)
Q Consensus        28 i~~~l~~~~g~~~~l~~---~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~  104 (420)
                      +.++++.+....+.+.+   ....++++..+++.||+||||++..+..+++++.+.+++ ++|++.+++.|+++|++.+.
T Consensus        35 i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~-a~~~~~ll~~r~l~Gig~~~  113 (393)
T PRK09705         35 LRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMREL-YPQSALLLSSALLGGVGIGI  113 (393)
T ss_pred             HHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHH-CcchHHHHHHHHHHHhHHHH
Confidence            35556555544444444   444556788888899999999999999999999999986 99999999999999999999


Q ss_pred             chhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhcc-chhHHHHHHHHHHHHHHHHhhhcccCcccCCC
Q 014698          105 SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIFGLLGIAWFSGFKILQEGETSNGA  183 (420)
Q Consensus       105 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (420)
                      ..+....++.|++| ++|+++++.+..+...|..+|+.+++++.++. +||..+.+.++..++.....+...++++++++
T Consensus       114 ~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (393)
T PRK09705        114 IQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVASSH  192 (393)
T ss_pred             HhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc
Confidence            99999999999997 88999999999999999999999999988875 89999887766655443333333222211110


Q ss_pred             CcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHH
Q 014698          184 TLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVS  263 (420)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  263 (420)
                      +  +                   +    .+.++.+++|+.+...+..++....++....+.|.|+++ +|.+..+++...
T Consensus       193 ~--~-------------------~----~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~  246 (393)
T PRK09705        193 K--T-------------------T----TTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLL  246 (393)
T ss_pred             C--C-------------------C----cCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHH
Confidence            0  0                   0    011345567888877777777778888889999999987 699999999999


Q ss_pred             HhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhh
Q 014698          264 ILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLY  343 (420)
Q Consensus       264 ~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  343 (420)
                      +..+++.++++++.+++.||+++|       +..  ..+..............+.+....  ...+.|++.+...+....
T Consensus       247 ~~~~i~~i~g~~~~g~l~~r~~~~-------~~~--~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~g~g~g~~~~~~~~  315 (393)
T PRK09705        247 ALMTLGQAAGALLMPAMARHQDRR-------KLL--MLALVLQLVGFCGFIWLPLQLPVL--WAMVCGLGLGGAFPLCLL  315 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccch-------HHH--HHHHHHHHHHHHHHHHccchHHHH--HHHHHHHhccchHHHHHH
Confidence            999999999999999999999864       222  222222222222222112222222  223456666655555544


Q ss_pred             hhhhccC-ccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCCCCCCCCC
Q 014698          344 CTHQDIS-PEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTRD  420 (420)
Q Consensus       344 ~~~~~~~-~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  420 (420)
                      ...+..+ ++++++..|+.+...++++.++|.+.|++.|..|++...|.+.+++++......+...+|++++++.||.
T Consensus       316 ~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (393)
T PRK09705        316 LALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQLWVKEA  393 (393)
T ss_pred             HHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccccchhcccC
Confidence            5556664 5789999999999999999999999999999998899888888877777777777788888888877663

>PRK11663 regulatory protein UhpC; Provisional

Probab=100.00  E-value=4.1e-34  Score=265.71  Aligned_cols=363  Identities=13%  Similarity=0.097  Sum_probs=252.3

Q ss_pred             hhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccc
Q 014698           42 IYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE  121 (420)
Q Consensus        42 l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~  121 (420)
                      .+.....+++++.+++.||+++|+++.++.++.+++.++.+. +++++.+++.|++.|++.+...+...+++.|++|+++
T Consensus        66 ~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~  144 (434)
T PRK11663         66 LFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGF-SSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE  144 (434)
T ss_pred             HHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH
Confidence            333445556888888899999999999999999999998886 8999999999999999999999999999999999999


Q ss_pred             cchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHH-HHHhhhcccCcccCCCCcCccchhhhhhhhhhh
Q 014698          122 RSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW-FSGFKILQEGETSNGATLAPRSNYINMKKSLSA  200 (420)
Q Consensus       122 r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (420)
                      |++++++.+.+.++|..++|.+++.+.+.+|||+.|++.++..++. ....++++|++++......++++..  .++..+
T Consensus       145 rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~~~~  222 (434)
T PRK11663        145 RGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHD--ALELAQ  222 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCccccccc--ccccch
Confidence            9999999999999999999999999999999999999988876654 3444556665543211111100000  000000


Q ss_pred             hhhhhcccccccc-h-hhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhh
Q 014698          201 SLEEMGESLKDVP-W-KAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAA  278 (420)
Q Consensus       201 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g  278 (420)
                      +  +..++.+..+ + ...+++|.++...+..++..........|+|.|+++.+|++..+++...+...++..+++++.|
T Consensus       223 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g  300 (434)
T PRK11663        223 Q--QEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAG  300 (434)
T ss_pred             h--ccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence            0  0000001111 1 1356788888888777777777778888999999887899999999999999999999999999


Q ss_pred             hhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHH
Q 014698          279 QFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILL  358 (420)
Q Consensus       279 ~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~  358 (420)
                      ++.||+.+++.+.   .......+...........  ...+........+.+|.+.............+..|+++++++.
T Consensus       301 ~l~dr~~~~~r~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~  375 (434)
T PRK11663        301 WGSDKLFNGNRGP---MNLIFAAGILLSVGSLWLM--PFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAAT  375 (434)
T ss_pred             hhHHHhccCCccH---HHHHHHHHHHHHHHHHHHc--ccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHH
Confidence            9999995432100   1111112222122221111  1222222222223333322211112223344557789999999


Q ss_pred             HHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCCCC
Q 014698          359 GITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQN  415 (420)
Q Consensus       359 g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (420)
                      |+.+...++|++++|.+.|++.|+. +++..|...+++.++.++..+...+++++++
T Consensus       376 g~~~~~~~~g~~~~p~~~g~l~~~~-g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  431 (434)
T PRK11663        376 GFVGLFAYLGAALSGYPLAKVLEIW-HWTGFFVVISIAAGISALLLLPFLNAQAPRE  431 (434)
T ss_pred             HHHHHHHHHHHHHhcccHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHHhhhchhc
Confidence            9999999999999999999999987 5888888887777666665555554444443

>TIGR00893 2A0114 d-galactonate transporter

Probab=100.00  E-value=3.9e-34  Score=264.12  Aligned_cols=363  Identities=21%  Similarity=0.296  Sum_probs=260.8

Q ss_pred             cccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhc
Q 014698           37 GRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS  116 (420)
Q Consensus        37 g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~  116 (420)
                      |...........++.++.+++.||++||+++..+.++..++..+.++ +++++.+++.|++.|++.+...+....++.|+
T Consensus        32 ~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~  110 (399)
T TIGR00893        32 GYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAF-AGAYVSLYILRVLLGAAEAPFFPGIILIVASW  110 (399)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHH-HcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHh
Confidence            33334444455566788888899999999999999999999998886 88999999999999999999999999999999


Q ss_pred             CCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhh-cccCcccCCCCcCccchhhhhh
Q 014698          117 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMK  195 (420)
Q Consensus       117 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  195 (420)
                      +|+++|++.+++.+...++|..++|.+++.+.+..+||+.|++.++..++..+...+ .||++++++ ...++++....+
T Consensus       111 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  189 (399)
T TIGR00893       111 FPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAK-WLTEEEKYIVVG  189 (399)
T ss_pred             CCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCccc-cCCHHHHhhcch
Confidence            999999999999999999999999999999999999999999988887775544443 444433221 111111100000


Q ss_pred             hhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHH
Q 014698          196 KSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTS  275 (420)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  275 (420)
                      +...+..++..++.++.+.++.+|+|+++...+..++..........+.|.|+++.+|.++.+.+.......++.+++.+
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (399)
T TIGR00893       190 GLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMI  269 (399)
T ss_pred             hhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHH
Confidence            00000001111222334567888999999999898988888999999999999998899999999999999999999999


Q ss_pred             hhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchH
Q 014698          276 IAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYAS  355 (420)
Q Consensus       276 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g  355 (420)
                      +.+++.||+++|+..... ...........  ...........+...........+.+.....+.......+..|+++|+
T Consensus       270 ~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  346 (399)
T TIGR00893       270 LGGRLSDLLLRRGKSLVF-ARKTAIIAGLV--LSLLMFATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAG  346 (399)
T ss_pred             HHHHHHHHHhhcccchhH-HHHHHHHHHHH--HHHHHHHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHH
Confidence            999999999986311000 00111111111  111111111112223333333333333334556666677778999999


Q ss_pred             HHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHH
Q 014698          356 ILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIV  404 (420)
Q Consensus       356 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~  404 (420)
                      ++.|+.+...++|+.++|.+.|.+.|..++++..+.+.+++.+++.+..
T Consensus       347 ~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~  395 (399)
T TIGR00893       347 LTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY  395 (399)
T ss_pred             HHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999987658888877766655555444

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=100.00  E-value=3e-33  Score=259.97  Aligned_cols=333  Identities=12%  Similarity=0.140  Sum_probs=229.0

Q ss_pred             hhhhhHHh---HHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHH--------HHHHHHHHHHhccccchhhh
Q 014698           41 RIYLKDTN---LLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMP--------GLVLSRVLVGIGEGVSPSAA  109 (420)
Q Consensus        41 ~l~~~~~~---~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~  109 (420)
                      ..+...+.   +++++.+++.||+||||++..+..+++++++++++ ++++.        .+++.|+++|++.|..++..
T Consensus        67 ~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~  145 (432)
T PRK10406         67 GVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIAC-LPGYETIGTWAPALLLLARLFQGLSVGGEYGTS  145 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhh-cCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhH
Confidence            33444444   67888999999999999999999999999999886 77653        58999999999999999999


Q ss_pred             HHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhh--------hccchhHHHHHHHHHHHHHHHHhhhcccCcccC
Q 014698          110 TDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSN  181 (420)
Q Consensus       110 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~  181 (420)
                      .++++|++|+++|+++.++.+.+...|..+++.+...+.        +.+|||++|++.++++++.......+||+++.+
T Consensus       146 ~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~  225 (432)
T PRK10406        146 ATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQE  225 (432)
T ss_pred             HHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHH
Confidence            999999999999999999999888888888887765543        257999999998887776554444455543211


Q ss_pred             CCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHH-hHHHHHHHhhhhhhHhhhhhCCCcchhh
Q 014698          182 GATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFC-GSWGHYTCLSWLPTYFSEELSLNLTEAA  260 (420)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~  260 (420)
                      +++                       ..+..++++++|+|+.+...+...+ ....++....|+|.|+++.+|++..+.+
T Consensus       226 ~~~-----------------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~  282 (432)
T PRK10406        226 TRA-----------------------LKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVAS  282 (432)
T ss_pred             Hhh-----------------------hcccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence            000                       0011246778888888776655544 3667788889999999888899988888


Q ss_pred             HHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHH-hhcCCCcHHHHHHHHHHH-HHhhhhh
Q 014698          261 WVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS-SIDLGLPHWEIVGILTAG-LALSSFA  338 (420)
Q Consensus       261 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g-~~~~~~~  338 (420)
                      .......+...++.++.|+++||++||       + ................. .............+...+ ...+...
T Consensus       283 ~~~~i~~~~~~i~~~~~G~l~Dr~grr-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (432)
T PRK10406        283 GIMTAALFVFMLIQPLIGALSDKIGRR-------T-SMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYT  354 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCch-------H-HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence            888888888888899999999999975       2 22222222211111111 111111222222222212 2222222


Q ss_pred             hhhhhhhhhccCccchHHHHHHHHHhhhh-hHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhh
Q 014698          339 LSGLYCTHQDISPEYASILLGITNTVGAV-PGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWL  406 (420)
Q Consensus       339 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (420)
                      ........+.+|++.|+++.|+.+...+. .+...|.+.+.+ +..|.+...++..++..+++.+..++
T Consensus       355 ~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~  422 (432)
T PRK10406        355 SISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLM  422 (432)
T ss_pred             HHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence            23334456778999999999999987764 355577777754 55556665666555555554444443

>PRK03545 putative arabinose transporter; Provisional

Probab=100.00  E-value=2.5e-33  Score=257.51  Aligned_cols=342  Identities=16%  Similarity=0.140  Sum_probs=255.0

Q ss_pred             hhhhhccccccchhhhhH---HhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccc
Q 014698           29 KKWVGLRIGRRGRIYLKD---TNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS  105 (420)
Q Consensus        29 ~~~l~~~~g~~~~l~~~~---~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~  105 (420)
                      ..+++.+..+.+.+...+   ..++++..+++.||+||||++..+..+..++++.+++ ++|++.+++.|+++|++.+..
T Consensus        36 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~r~~~G~~~~~~  114 (390)
T PRK03545         36 AQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSAL-AWNFTVLLISRIGIAFAHAIF  114 (390)
T ss_pred             HhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHH
Confidence            445555555555443333   3455677788899999999999999999999998886 999999999999999999888


Q ss_pred             hhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHH-hhhcccCcccCCCC
Q 014698          106 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG-FKILQEGETSNGAT  184 (420)
Q Consensus       106 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~  184 (420)
                      .+...+++.|++|+|||++++++...+.++|..++|++++.+.+.+|||+.|++.++.+++..+. ...+||+++++ + 
T Consensus       115 ~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~-~-  192 (390)
T PRK03545        115 WSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSEH-S-  192 (390)
T ss_pred             HHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC-c-
Confidence            89999999999999999999999999999999999999999999999999999999887765433 33445432210 0 


Q ss_pred             cCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHH
Q 014698          185 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI  264 (420)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  264 (420)
                        +         +             ..+.++++|+|.++......++.....+....+.|.++++.+|.++.+.+....
T Consensus       193 --~---------~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~  248 (390)
T PRK03545        193 --G---------S-------------LKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLL  248 (390)
T ss_pred             --c---------h-------------HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHH
Confidence              0         0             011356788888887766666666666666778888988888999999999999


Q ss_pred             hhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhh
Q 014698          265 LPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYC  344 (420)
Q Consensus       265 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  344 (420)
                      ...++.++++++.+++.||+++|         ...............+... .++........++.|++.....+.....
T Consensus       249 ~~~~~~~~g~~~~g~l~dr~~~~---------~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~  318 (390)
T PRK03545        249 LFGGAGIIGSVLFSRLGNRHPSG---------FLLIAIALLLVCLLLLLPA-ANSEWHLSVLSIFWGIAIMCIGLAMQVK  318 (390)
T ss_pred             HHHHHHHHHHHHHHHHhhccchh---------HHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHHHHhcchHHHHHH
Confidence            99999999999999999998743         2222222222222222222 2223344445566677665444444444


Q ss_pred             hhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698          345 THQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFA  409 (420)
Q Consensus       345 ~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (420)
                      ..+ ..|++++++.|+.+...++|..+||.+.|.+.|+. +++..+...+.+.+++.+..+...+
T Consensus       319 ~~~-~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~  381 (390)
T PRK03545        319 VLK-LAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHL-GLSSIGYVGAALALAALVWSILIFR  381 (390)
T ss_pred             HHH-hCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHHHHHHHHHcc
Confidence            444 45678999999999999999999999999999997 7888888877766666655544443

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=100.00  E-value=1.3e-33  Score=260.16  Aligned_cols=355  Identities=18%  Similarity=0.190  Sum_probs=244.4

Q ss_pred             hhhhhccccccchhh---hhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccc
Q 014698           29 KKWVGLRIGRRGRIY---LKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS  105 (420)
Q Consensus        29 ~~~l~~~~g~~~~l~---~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~  105 (420)
                      .++++.+..+.+.+.   .....++++..+++.||+||||++..+.+++++++.++++ ++|++.+++.|+++|++.+..
T Consensus        35 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~G~~~~~~  113 (412)
T TIGR02332        35 GKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMF-ATGPESLYLLRILVGIAEAGF  113 (412)
T ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHhhH
Confidence            445544444444333   3344556777888899999999999999999999999986 999999999999999999999


Q ss_pred             hhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhh------ccchhHHHHHHHHHHHHH-HHHhhhcccCc
Q 014698          106 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE------NLGWESVFYIFGLLGIAW-FSGFKILQEGE  178 (420)
Q Consensus       106 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~------~~gwr~~f~~~~~~~~~~-~~~~~~~~~~~  178 (420)
                      .|....++.|++|+++|++++++++.+.++|.++++.+++++.+      ..|||+.|++.+++.++. .+.++++||+|
T Consensus       114 ~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p  193 (412)
T TIGR02332       114 LPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSP  193 (412)
T ss_pred             HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCc
Confidence            99999999999999999999999999999999999999998864      469999999988887764 44555666665


Q ss_pred             ccCCCCcCccchhhhhhh-h-hhhh---hh-h-hcccc-cccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhh
Q 014698          179 TSNGATLAPRSNYINMKK-S-LSAS---LE-E-MGESL-KDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSE  250 (420)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~-~-~~~~---~~-~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (420)
                      ++.+.. .+++++...+. + ...+   .+ + .+++. ++..+++++ +|.+|...+..++.....+.+..|+|.++++
T Consensus       194 ~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~  271 (412)
T TIGR02332       194 DKAKWL-DEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQS  271 (412)
T ss_pred             ccCCCC-CHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            432110 01111000000 0 0000   00 0 00000 011233444 5788888888888888888999999999987


Q ss_pred             h-hCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHH
Q 014698          251 E-LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILT  329 (420)
Q Consensus       251 ~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (420)
                      . .|++..+++.......++.+++.++.|+++||+++|       +..... ......+.+.+... .++.......+..
T Consensus       272 ~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r-------~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~  342 (412)
T TIGR02332       272 FNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKER-------KHHTAL-PYLFAAAGWLLASA-TDHNLIQLLGIIM  342 (412)
T ss_pred             cCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCcc-------HHHHHH-HHHHHHHHHHHHHh-cCCHHHHHHHHHH
Confidence            3 467888889999999999999999999999999865       322222 22222222222222 2222222222222


Q ss_pred             HHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhH
Q 014698          330 AGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSI  395 (420)
Q Consensus       330 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~  395 (420)
                      .+.+.............+..|+++|+++.|+.+...++|++++|.+.|.+.|..|+|+..+.+.++
T Consensus       343 ~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~  408 (412)
T TIGR02332       343 ASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAA  408 (412)
T ss_pred             HHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHH
Confidence            222221111111122234578899999999999999999999999999999998889888776544

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=100.00  E-value=3e-32  Score=245.97  Aligned_cols=342  Identities=16%  Similarity=0.045  Sum_probs=233.7

Q ss_pred             hhhhhhccccccch---hhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhcccc
Q 014698           28 LKKWVGLRIGRRGR---IYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGV  104 (420)
Q Consensus        28 i~~~l~~~~g~~~~---l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~  104 (420)
                      +.++++.+..+.+.   .+...+.++++..+++.||++||+++..+......+ .......+|++.+++.|+++|++.+.
T Consensus        17 i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~R~l~G~g~~~   95 (368)
T TIGR00903        17 VAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAA-AGRLLDPFNYEWLLACQLLAALGQPF   95 (368)
T ss_pred             HHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHH-HHHHHHhccHHHHHHHHHHHHhHhHH
Confidence            34455444444443   444455567888888999999888766555444443 33333247899999999999999886


Q ss_pred             chhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHH-HHHhhhcccCcccCCC
Q 014698          105 SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW-FSGFKILQEGETSNGA  183 (420)
Q Consensus       105 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~  183 (420)
                       .+.....++|++|+|+|++++++.+.+.++|.++++++++++.+.+|||+.|++.++++++. .+..+++||+|+++++
T Consensus        96 -~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~  174 (368)
T TIGR00903        96 -LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPFQAAE  174 (368)
T ss_pred             -HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence             45566777999999999999999999999999999999999999999999999988887664 4555667776543221


Q ss_pred             CcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHH
Q 014698          184 TLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVS  263 (420)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  263 (420)
                      +   .+.     +       +.     ..++++++|||.+|...+..++....++.+.+|+|.|+++ .|++.. .+...
T Consensus       175 ~---~~~-----~-------~~-----~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~  232 (368)
T TIGR00903       175 G---FGF-----K-------DA-----VKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAV  232 (368)
T ss_pred             C---cch-----H-------HH-----HHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHH
Confidence            1   000     0       00     0125689999999999999999999999999999999976 578764 55555


Q ss_pred             HhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhh
Q 014698          264 ILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLY  343 (420)
Q Consensus       264 ~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  343 (420)
                      ....+.+.++   .++++||..|++.     |+..........++.........+ .........+.+++.....+....
T Consensus       233 ~l~~~~g~~g---~~~~~d~~~r~~~-----r~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~  303 (368)
T TIGR00903       233 ALAILAGLIG---VAVIPDRVARAGL-----RSIYIRAAALLIAAFFLALAFELN-RLALFAFIGIAGLLMLPAYAIIMD  303 (368)
T ss_pred             HHHHHHHHHH---HHHhhHHhhhhhh-----HHHHHHHHHHHHHHHHHHHHHccc-cHHHHHHHHHHHHhhhhhHHHHHH
Confidence            5555555544   5788888876432     222222122222222222222222 222222333344444433344445


Q ss_pred             hhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHh
Q 014698          344 CTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVW  405 (420)
Q Consensus       344 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (420)
                      ...+.+|++.||++.|+.+...++++..+|.+.+.+..   +....|.+.++..+++.+...
T Consensus       304 ~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~---~~~~~f~~~~~~~~i~~~~~~  362 (368)
T TIGR00903       304 WIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS---SAEAYFTFLAILITIAFAIAL  362 (368)
T ss_pred             HHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHH
Confidence            56677899999999999999999999999999998883   444566666666666555543

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PRK09952 shikimate transporter; Provisional

Probab=100.00  E-value=1.1e-31  Score=249.52  Aligned_cols=329  Identities=18%  Similarity=0.130  Sum_probs=228.3

Q ss_pred             HHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHH--------HHHHHHHHHHhccccchhhhHHHHHhcCCcc
Q 014698           49 LLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMP--------GLVLSRVLVGIGEGVSPSAATDLIARSIPLE  120 (420)
Q Consensus        49 ~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~  120 (420)
                      +++++.+++.||+|||+++..+..+++++++++++ +++++        .++++|+++|++.|..++....++.|++|+|
T Consensus        79 ~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~  157 (438)
T PRK09952         79 LGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGL-LPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKN  157 (438)
T ss_pred             hHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCC
Confidence            55777899999999999999999999999999986 88876        5889999999999999999999999999999


Q ss_pred             ccchhhHHHHhhhhhHHHHHHhhHHHhhh--------ccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhh
Q 014698          121 ERSRAVSFVFGGLSFGSVAGLLLAPPIIE--------NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYI  192 (420)
Q Consensus       121 ~r~~~~~~~~~~~~~g~~~g~~l~~~l~~--------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (420)
                      +|++..+..+.+..+|.++++.+...+.+        .+|||..|++.+++.++........||++++.+++.+.+    
T Consensus       158 ~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~----  233 (438)
T PRK09952        158 KKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQA----  233 (438)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcc----
Confidence            99999999999999999999887766552        579999999988776554444444455443211110000    


Q ss_pred             hhhhhhhhhhhhhcccccccc-hhhhhhcHHHHHHHH-HHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHH
Q 014698          193 NMKKSLSASLEEMGESLKDVP-WKAIFRSKAVWAMIY-AHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLAS  270 (420)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  270 (420)
                                 +   ..++.+ .+.++|+|+.+.... ..++.....+....+.|.|+++.+|++...........++..
T Consensus       234 -----------~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~  299 (438)
T PRK09952        234 -----------A---AKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLS  299 (438)
T ss_pred             -----------c---ccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence                       0   000111 223566776666543 455556677778889999998888988876655556667777


Q ss_pred             HHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHH-H-HhhcCCCcHHH-HHHHHHHHHHhhhhhhhhhhhhhh
Q 014698          271 VLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMT-L-SSIDLGLPHWE-IVGILTAGLALSSFALSGLYCTHQ  347 (420)
Q Consensus       271 ~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~  347 (420)
                      +++.++.|+++||++||       + ... .+.....+... . ......+.... ....++.+++.+...........+
T Consensus       300 ~i~~~~~g~l~Dr~grr-------~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e  370 (438)
T PRK09952        300 CLTIPCFAWLADRFGRR-------R-VYI-TGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTE  370 (438)
T ss_pred             HHHHHHHHHHHHHhCch-------H-HHH-HHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88889999999999975       2 222 22222222211 1 11111222222 223344455555445555566667


Q ss_pred             ccCccchHHHHHHHHHhhh-hhHHHHHHHHHHHhccC-CceeeeehhhhHHHHHHHHHHh
Q 014698          348 DISPEYASILLGITNTVGA-VPGIVGVALTGYLLDST-HSWSMSLFAPSIFFYLTGTIVW  405 (420)
Q Consensus       348 ~~~~~~~g~~~g~~~~~~~-~g~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~  405 (420)
                      .+|++.|+++.|+.+.... +++.++|.+.+++.|.. ++|...+...+++.+++.+..+
T Consensus       371 ~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~  430 (438)
T PRK09952        371 MFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTAL  430 (438)
T ss_pred             HCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH
Confidence            7899999999999766654 89999999999999865 3566666665555555544443

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=100.00  E-value=3.7e-32  Score=234.88  Aligned_cols=367  Identities=20%  Similarity=0.198  Sum_probs=281.8

Q ss_pred             chhhhhHHHHHH---HHhhh-----------hhhhhccccccchhhhhHHhHHhhhhcch---hhhcchhHHHHHHHHHH
Q 014698           12 RVQFRVLTVNRV---KCAGL-----------KKWVGLRIGRRGRIYLKDTNLLELLRLPL---LFVTWIRKVLQTGVLIW   74 (420)
Q Consensus        12 ~~~~~~l~~~~~---~~~~i-----------~~~l~~~~g~~~~l~~~~~~~~~l~~~p~---~~~~~~r~~~~~~~~~~   74 (420)
                      +.+.+.+..+.+   ++|.+           ..+++.+.+++..+..+....++++..|.   .||+|.|++...+.++.
T Consensus        10 ~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~   89 (417)
T COG2223          10 RIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLL   89 (417)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHH
Confidence            344555555554   55544           56777788899988888889998888777   79999999999999999


Q ss_pred             HHHHHHHHHhhch---HHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhcc
Q 014698           75 SLATALLPLLAGF---MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL  151 (420)
Q Consensus        75 ~~~~~~~~~~~~~---~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~  151 (420)
                      .+-++..++ +.+   ++++++.+++.|++ |..+....+++++|+|||++|.++|+.. ..|+|..+...++..+....
T Consensus        90 ~IP~~~~~~-a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~  166 (417)
T COG2223          90 LIPCLGLAF-AVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF  166 (417)
T ss_pred             HHHHHHHHH-HccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH
Confidence            999988876 544   45999999999998 6777888999999999999999999999 99999999999999999988


Q ss_pred             c---hhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHH
Q 014698          152 G---WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIY  228 (420)
Q Consensus       152 g---wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (420)
                      +   ||....+..+..++..+..++..+|.++.+.+.++..                     ..+++.++++|+.|.+.+
T Consensus       167 g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~---------------------~~~~~~v~~~~~~W~lsl  225 (417)
T COG2223         167 GFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL---------------------PAQLKAVFSNKDTWLLSL  225 (417)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc---------------------hhHHHHHhcCcchHHHHH
Confidence            8   9999999888887766555555555443222211110                     022567888999999999


Q ss_pred             HHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHH
Q 014698          229 AHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAV  308 (420)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~  308 (420)
                      .++....++.++..++|.|+++++|.++.++|.......+.+.+.++.+|+++||+|.+       |... .........
T Consensus       226 lY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~-------rv~~-~~f~~~~~~  297 (417)
T COG2223         226 LYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGR-------RVTL-AVFVGMALA  297 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccch-------hHHH-HHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999975       3333 222222222


Q ss_pred             HHHHHhhcC-----CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698          309 CMTLSSIDL-----GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST  383 (420)
Q Consensus       309 ~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~  383 (420)
                      ...+....+     .+.......++..+.+.+.........+.. ..+++.|.+.|+...++.+|+..-|...|...|.+
T Consensus       298 ~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~-if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~t  376 (417)
T COG2223         298 AALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPV-IFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLT  376 (417)
T ss_pred             HHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechH-HHHhhhhHHHHHHHHhccccccchhHHHHHHHHhc
Confidence            222222211     223333333455555555444444444433 34568999999999999999999999999999999


Q ss_pred             CceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698          384 HSWSMSLFAPSIFFYLTGTIVWLAFASS  411 (420)
Q Consensus       384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (420)
                      |++...|++...+.+++..+.+....++
T Consensus       377 g~~~~~f~~~~~~~~~a~v~~~~~y~r~  404 (417)
T COG2223         377 GSYTGAFMLLLAFYLVALVLTWALYARR  404 (417)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            8899999998888888877776665554

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=100.00  E-value=6.1e-32  Score=254.95  Aligned_cols=341  Identities=16%  Similarity=0.082  Sum_probs=254.6

Q ss_pred             hhhhhccccc---cchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccc
Q 014698           29 KKWVGLRIGR---RGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS  105 (420)
Q Consensus        29 ~~~l~~~~g~---~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~  105 (420)
                      ..+++.+...   ....+........+..+++.||++||+++..+..++.++++.+++ ++|++.++++|+++|+|.+..
T Consensus        33 ~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~-a~~~~~li~~r~l~G~g~~~~  111 (495)
T PRK14995         33 SMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAF-SPTASWLIATRALLAIGAAMI  111 (495)
T ss_pred             HHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHH
Confidence            5556554433   334444455556778888899999999999999999999999986 999999999999999999998


Q ss_pred             hhhhHHHHHhcC-CccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHH-HHhhhcccCcccCCC
Q 014698          106 PSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQEGETSNGA  183 (420)
Q Consensus       106 ~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~  183 (420)
                      .+.....+.+++ |+++|++++++......+|..+||.+++++.+.+|||+.|++....+++.. +....+|++++++ +
T Consensus       112 ~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~-~  190 (495)
T PRK14995        112 VPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRR-D  190 (495)
T ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC-C
Confidence            888888887776 678999999999999999999999999999999999999999887776654 4445566554322 2


Q ss_pred             CcCccchhh--------------hhhhhh-hh-----------------hhhhhcccccccchhhhhhcHHHHHHHHHHH
Q 014698          184 TLAPRSNYI--------------NMKKSL-SA-----------------SLEEMGESLKDVPWKAIFRSKAVWAMIYAHF  231 (420)
Q Consensus       184 ~~~~~~~~~--------------~~~~~~-~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (420)
                      ++.|.....              ...+.+ ..                 ...|.+.+.+..+ .+++|+|.+....+..+
T Consensus       191 ~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~-~~lf~~~~~~~~~~~~~  269 (495)
T PRK14995        191 QPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMID-MRLFTHRIILSGVVMAM  269 (495)
T ss_pred             CCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcC-HHHhCCcccHHHHHHHH
Confidence            222211100              000000 00                 0112222233333 46889999988888888


Q ss_pred             HhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHH
Q 014698          232 CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMT  311 (420)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (420)
                      +.....++...+.|.|+++.+|+++.++|....+..++..++.++.|++.||+++|        + ....+.....+...
T Consensus       270 ~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~--------~-~~~~g~~~~~~~~~  340 (495)
T PRK14995        270 TAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLR--------L-VATGGMALSALSFY  340 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch--------H-HHHHHHHHHHHHHH
Confidence            88888888888999999999999999999999999999999999999999999964        2 22333333333322


Q ss_pred             HH-hhcCC-CcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc
Q 014698          312 LS-SIDLG-LPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD  381 (420)
Q Consensus       312 ~~-~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~  381 (420)
                      .. ....+ +........++.|++.+....+......+..|+++++.+.++.++.+++|+.+|+.+.|.+.+
T Consensus       341 ~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~  412 (495)
T PRK14995        341 GLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS  412 (495)
T ss_pred             HHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            22 22222 223334456777888887777777777788899999999999999999999999999999875

>PRK10091 MFS transport protein AraJ; Provisional

Probab=100.00  E-value=2.6e-31  Score=243.22  Aligned_cols=345  Identities=14%  Similarity=0.159  Sum_probs=242.2

Q ss_pred             hhhhhcccccc---chhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccc
Q 014698           29 KKWVGLRIGRR---GRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS  105 (420)
Q Consensus        29 ~~~l~~~~g~~---~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~  105 (420)
                      .++++.+....   .........+++++.+++.||++|||++..+..+.+++.+++++ ++|++.+++.|+++|++.+..
T Consensus        30 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~-~~~~~~l~~~r~l~G~~~~~~  108 (382)
T PRK10091         30 AHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTL-SSSYLMLAIGRLVSGFPHGAF  108 (382)
T ss_pred             HHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHhhhHHH
Confidence            44454443333   34445556667888888899999999999999999999998886 999999999999999999988


Q ss_pred             hhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHH-HHhhhcccCcccCCCC
Q 014698          106 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQEGETSNGAT  184 (420)
Q Consensus       106 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~  184 (420)
                      .+....++.|++|+++|++++++...+..+|..++|++++.+.+..|||+.|++.++..++.. .....+||.+++++ +
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~-~  187 (382)
T PRK10091        109 FGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEAK-G  187 (382)
T ss_pred             HHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCcccc-c
Confidence            888889999999999999999999999999999999999999998999999999988776644 33445665432110 0


Q ss_pred             cCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHH
Q 014698          185 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI  264 (420)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  264 (420)
                        +.          +    +         ..+.+|+++.+......++.....+....+.+.++++.+|+++.+.++..+
T Consensus       188 --~~----------~----~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~  242 (382)
T PRK10091        188 --GL----------R----E---------QFHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMM  242 (382)
T ss_pred             --CH----------H----H---------HHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence              00          0    0         013456777776655555555555555667788888878999999999999


Q ss_pred             hhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhh
Q 014698          265 LPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYC  344 (420)
Q Consensus       265 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  344 (420)
                      ...++.++++++.+++.||++++        +... .+....++.........+......+..++.+.+.....++....
T Consensus       243 ~~~~~~~ig~~~~g~l~~r~~~~--------~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  313 (382)
T PRK10091        243 LVGLGMVLGNLLSGRLSGRYSPL--------RIAA-VTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQIL  313 (382)
T ss_pred             HHHHHHHHHhHHHheeccccCch--------hHHH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence            99999999999999999999864        2222 22222222222222212222333333344444444333333333


Q ss_pred             hhhc-cCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698          345 THQD-ISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASS  411 (420)
Q Consensus       345 ~~~~-~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (420)
                      ..++ .+++.++.+.  .+...++|.++||.+.|.+.|..++|+..+.+.++...+.........+++
T Consensus       314 ~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (382)
T PRK10091        314 LLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYK  379 (382)
T ss_pred             HHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHhhhh
Confidence            3333 3445555543  466788999999999999999877899888887665555554444444433

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=100.00  E-value=7.1e-32  Score=252.06  Aligned_cols=354  Identities=15%  Similarity=0.186  Sum_probs=239.0

Q ss_pred             hhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh---hchHHHHHHHHHHHHhccccchhhhHHHHHhcCC
Q 014698           42 IYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL---AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIP  118 (420)
Q Consensus        42 l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~  118 (420)
                      .......+++++.+++.||+++|+++..+.++.+++.+.+++.   +++++.+++.|++.|++.+...+.....+.|++|
T Consensus        71 ~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~  150 (452)
T PRK11273         71 GISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWS  150 (452)
T ss_pred             HHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCC
Confidence            3344455568888888999999999999999999998877652   1367889999999999999988888889999999


Q ss_pred             ccccchhhHHHHhhhhhHHH-HHHhhHHHhhhccchhHHHHHHHHHHHHH-HHHhhhcccCcccCCCCcCccchhhhhhh
Q 014698          119 LEERSRAVSFVFGGLSFGSV-AGLLLAPPIIENLGWESVFYIFGLLGIAW-FSGFKILQEGETSNGATLAPRSNYINMKK  196 (420)
Q Consensus       119 ~~~r~~~~~~~~~~~~~g~~-~g~~l~~~l~~~~gwr~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (420)
                      +++|++++++.+.+.++|.. .+|+++..+....|||+.|++.++..++. .+..+++||++++...++.++.+     +
T Consensus       151 ~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~  225 (452)
T PRK11273        151 QKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYK-----N  225 (452)
T ss_pred             hHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhh-----h
Confidence            99999999999999999864 45655444444459999999988877664 45556667665432111100000     0


Q ss_pred             hhhhhhhh-hccccc-ccc-hhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHH
Q 014698          197 SLSASLEE-MGESLK-DVP-WKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLV  273 (420)
Q Consensus       197 ~~~~~~~~-~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  273 (420)
                      +..+..++ ..++.+ +.. .+.++|+|.+|...+..++.....+....++|.|+++..|++..+++.......++.+++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g  305 (452)
T PRK11273        226 DYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPG  305 (452)
T ss_pred             ccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            00000000 000000 011 123678899999888888888888888899999999988999999998888888999999


Q ss_pred             HHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCcc
Q 014698          274 TSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDL-GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPE  352 (420)
Q Consensus       274 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  352 (420)
                      .++.|+++||+++++      |............+......... .+.....+.++..|...............+..|++
T Consensus       306 ~~~~G~l~dr~~~~r------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~  379 (452)
T PRK11273        306 TLLCGWMSDKVFRGN------RGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKK  379 (452)
T ss_pred             HHHHHHHHHHHccCC------cchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChh
Confidence            999999999996432      11111111111112122222221 22222233334444433222222223345778999


Q ss_pred             chHHHHHHHHHhhhhhHHH-HHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhh
Q 014698          353 YASILLGITNTVGAVPGIV-GVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLA  407 (420)
Q Consensus       353 ~~g~~~g~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (420)
                      .+|++.|+.+...++|+.+ +|.+.|.+.|+. +++..|.+.+++++++.+.....
T Consensus       380 ~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~-g~~~~f~~~~~~~~~~~~~~~~~  434 (452)
T PRK11273        380 AAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-GWDGGFMVMIGGSILAVILLIVV  434 (452)
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998765 799999999997 58888887776666655554433

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=100.00  E-value=2e-31  Score=246.55  Aligned_cols=335  Identities=18%  Similarity=0.190  Sum_probs=242.0

Q ss_pred             hhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccc
Q 014698           42 IYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE  121 (420)
Q Consensus        42 l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~  121 (420)
                      .......++.++.+++.||++|||++..+..+..++.+.+.+ +++++.+++.|++.|++.+...+...+++.|++|+++
T Consensus        58 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~  136 (406)
T PRK11551         58 AGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQ-AWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL  136 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH
Confidence            333444556888888999999999999999999998888876 8999999999999999999999999999999999999


Q ss_pred             cchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHH-HHhhhcccCcccCCCCcCccchhhhhhhhhhh
Q 014698          122 RSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQEGETSNGATLAPRSNYINMKKSLSA  200 (420)
Q Consensus       122 r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (420)
                      |++++++.+.+..+|..+++.+++.+.+..+||+.|++.++..++.. +...++||++++++++..++++     ++   
T Consensus       137 r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~---  208 (406)
T PRK11551        137 RGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQR-----AP---  208 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhh-----hh---
Confidence            99999999999999999999999988888899999999877665543 4445567765432221110000     00   


Q ss_pred             hhhhhcccccccchhhhhh---cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhh
Q 014698          201 SLEEMGESLKDVPWKAIFR---SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIA  277 (420)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  277 (420)
                       .           .+..++   ++..+......++.....+....+.|.++++ .|+++.+.+.......++.++++++.
T Consensus       209 -~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~  275 (406)
T PRK11551        209 -V-----------LRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLI  275 (406)
T ss_pred             -h-----------HHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHH
Confidence             0           001111   2233333344444455566777789999987 59999999999999999999999999


Q ss_pred             hhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHH
Q 014698          278 AQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASIL  357 (420)
Q Consensus       278 g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~  357 (420)
                      |++.||++++       +  ....+............... +.....+..++.|++.+...+.......+.+|+++|+++
T Consensus       276 g~l~dr~g~~-------~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~  345 (406)
T PRK11551        276 GALMDRLRPR-------R--VVLLIYAGILASLAALAAAP-SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTG  345 (406)
T ss_pred             HHHHHHHhHH-------H--HHHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhh
Confidence            9999999864       2  22223332233333222222 233333444556666655555566666777899999999


Q ss_pred             HHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhc
Q 014698          358 LGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAF  408 (420)
Q Consensus       358 ~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (420)
                      .|+.+...++|..++|.+.|.+.|+.+++...+.....+.+++....+...
T Consensus       346 ~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (406)
T PRK11551        346 VGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLV  396 (406)
T ss_pred             hhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999866666566655554444444444333

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=100.00  E-value=1e-31  Score=246.36  Aligned_cols=343  Identities=17%  Similarity=0.187  Sum_probs=244.8

Q ss_pred             cccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhc
Q 014698           37 GRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS  116 (420)
Q Consensus        37 g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~  116 (420)
                      |...........++.++.+++.||++||+++..+.++..++.++.++ +++++.+++.|++.|++.+...+...+++.|+
T Consensus        33 g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  111 (379)
T TIGR00881        33 GLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGF-STSLWVMAALWALNGIFQGMGWPPCGRTVTKW  111 (379)
T ss_pred             HHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHhhccccCCchHHHHHHh
Confidence            33344445555567888888899999999999999999999998886 89999999999999999999999999999999


Q ss_pred             CCccccchhhHHHHhhhhhHHHHHH-hhHHHhhhccchhHHHHHHHHHHHHH-HHHhhhcccCcccCCCCcCccchhhhh
Q 014698          117 IPLEERSRAVSFVFGGLSFGSVAGL-LLAPPIIENLGWESVFYIFGLLGIAW-FSGFKILQEGETSNGATLAPRSNYINM  194 (420)
Q Consensus       117 ~~~~~r~~~~~~~~~~~~~g~~~g~-~l~~~l~~~~gwr~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (420)
                      +|+++|++++++.+.+..+|..++| .++..+.+..+||+.|++.++..++. .+...+.+|++++++.++.+++.....
T Consensus       112 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (379)
T TIGR00881       112 FSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPNEEP  191 (379)
T ss_pred             cCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCccccc
Confidence            9999999999999999999999999 57777777889999999988877664 344445555443322111111100000


Q ss_pred             hhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHH
Q 014698          195 KKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVT  274 (420)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  274 (420)
                      +++  ++.++.+.+..+...++++|+|.++...+..++..........+.|.|+++.+|+++.+.+.......++.+++.
T Consensus       192 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  269 (379)
T TIGR00881       192 DGD--AEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGT  269 (379)
T ss_pred             ccc--cccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhH
Confidence            000  000011111122235677889999988888888888888889999999998889999999999999999999999


Q ss_pred             HhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhc-CCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccc
Q 014698          275 SIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID-LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEY  353 (420)
Q Consensus       275 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  353 (420)
                      ++.+++.||..+++      +..................... ..+........+..|...............+..|+++
T Consensus       270 ~~~g~l~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  343 (379)
T TIGR00881       270 LLAGWLSDKLFNGR------RGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA  343 (379)
T ss_pred             HHHHHHHHHHcCCc------chHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch
Confidence            99999999875442      2222222222222222222221 1112223333344454443333333445567789999


Q ss_pred             hHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeee
Q 014698          354 ASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMS  389 (420)
Q Consensus       354 ~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~  389 (420)
                      |+++.|+.+....+|+.++|.+.|.+.|.. +++..
T Consensus       344 ~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~  378 (379)
T TIGR00881       344 AGTAAGFVGFFAYLGGILAGLPLGYLADGF-GWAGA  378 (379)
T ss_pred             hHHHHHHHHHhhhhhhhhhhhhHHHHHHhh-ccccc
Confidence            999999999999999999999999999986 56544

>TIGR00900 2A0121 H+ Antiporter protein

Probab=100.00  E-value=5.7e-31  Score=240.24  Aligned_cols=319  Identities=13%  Similarity=0.077  Sum_probs=241.9

Q ss_pred             chhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhc-----hHHHHHHHHHHHHhccccchhhhHHHHH
Q 014698           40 GRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAG-----FMPGLVLSRVLVGIGEGVSPSAATDLIA  114 (420)
Q Consensus        40 ~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~  114 (420)
                      .........+..++.+++.||++|||++..+..+..++..+..+ .+     +++.+++.|+++|++.+...+...+++.
T Consensus        40 ~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~  118 (365)
T TIGR00900        40 ALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF-VALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLP  118 (365)
T ss_pred             HHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH-HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33444445556788888899999999999999998888887765 55     8999999999999999999999999999


Q ss_pred             hcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhh
Q 014698          115 RSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINM  194 (420)
Q Consensus       115 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (420)
                      |++|+++|++++++.+.+..+|.+++|.+++.+.+..|||+.|++.++..++..+..+.++++++++++++ +.++    
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----  193 (365)
T TIGR00900       119 DLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAASEIQ-ALSN----  193 (365)
T ss_pred             hcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCcccc-ccch----
Confidence            99999999999999999999999999999999999999999999988776665444444433222111110 0000    


Q ss_pred             hhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHh-hhhhhHhhhhhCCCcchhhHHHHhhHHHHHHH
Q 014698          195 KKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCL-SWLPTYFSEELSLNLTEAAWVSILPPLASVLV  273 (420)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  273 (420)
                        +   ..++     ....+++++|+|.++...+..++......... .+.|.|.++.+|.++.+.+.......++.+++
T Consensus       194 --~---~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (365)
T TIGR00900       194 --A---VLRD-----TREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLG  263 (365)
T ss_pred             --h---HHHH-----HHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence              0   0000     01124567888998888877777777776666 78899998878999999999999999999999


Q ss_pred             HHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccc
Q 014698          274 TSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEY  353 (420)
Q Consensus       274 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  353 (420)
                      .++.+++.||.+++         .....+...............++.....+..++.|++.+...+.......+..|+++
T Consensus       264 ~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  334 (365)
T TIGR00900       264 ALLLGLLGRYFKRM---------ALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL  334 (365)
T ss_pred             HHHHHHHHHHhchh---------HHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence            99999999998853         223333333333333333322223334455567788777666666777778889999


Q ss_pred             hHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698          354 ASILLGITNTVGAVPGIVGVALTGYLLDST  383 (420)
Q Consensus       354 ~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~  383 (420)
                      |+++.|+.+...+++..++|.+.|.+.|..
T Consensus       335 ~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~  364 (365)
T TIGR00900       335 LGRVFGAQFSLSHAAWPLGLILAGPLADHL  364 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            999999999999999999999999999875

>TIGR00891 2A0112 putative sialic acid transporter

Probab=100.00  E-value=7.5e-31  Score=242.93  Aligned_cols=354  Identities=14%  Similarity=0.087  Sum_probs=237.9

Q ss_pred             hhhhhccccccch---hhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccc
Q 014698           29 KKWVGLRIGRRGR---IYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS  105 (420)
Q Consensus        29 ~~~l~~~~g~~~~---l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~  105 (420)
                      .++++.+..+.+.   +......+++++.+++.||++||+++..+.++..++++++++ +++++.+++.|++.|++.+..
T Consensus        39 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~G~~~~~~  117 (405)
T TIGR00891        39 AGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGF-APGYITMFIARLVIGIGMGGE  117 (405)
T ss_pred             HHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHhhhhhh
Confidence            4444444444433   334444556888888899999999999999999999988876 899999999999999999999


Q ss_pred             hhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccc--hhHHHHHHHHHHHHHHHHhhhcccCcccCCC
Q 014698          106 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG--WESVFYIFGLLGIAWFSGFKILQEGETSNGA  183 (420)
Q Consensus       106 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g--wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (420)
                      .+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+  ||+.|++.++..++..+.....||+++++++
T Consensus       118 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (405)
T TIGR00891       118 YGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAEDWKEK  197 (405)
T ss_pred             hHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHH
Confidence            99999999999999999999999999999999999999999888766  9999998776666655555666776543221


Q ss_pred             CcCccchhhhhhhhhhhhh-hhhcccccccchhhhhh-c-HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhh
Q 014698          184 TLAPRSNYINMKKSLSASL-EEMGESLKDVPWKAIFR-S-KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAA  260 (420)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  260 (420)
                      ++.+++.....++..+.+. .+...+....+.++..+ + +.+........+.+........+.|.|+++.+|++..+.+
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~  277 (405)
T TIGR00891       198 HAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVA  277 (405)
T ss_pred             hhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHH
Confidence            1111100000000000000 00000000000111111 1 1122333333444455556677899999888899999999


Q ss_pred             HHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhh
Q 014698          261 WVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALS  340 (420)
Q Consensus       261 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  340 (420)
                      .+.+...++.+++.++.+++.||+++|        +................... .++.....+...+.+.........
T Consensus       278 ~~~~~~~~~~~~g~~~~g~l~dr~g~~--------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  348 (405)
T TIGR00891       278 NIVVFSNIGAIVGGCVFGFLGDWLGRR--------KAYVCSLLAGQLLIIPVFAI-GANVAVLGLGLFFQQMLVQGIWGI  348 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCch--------hhhHHHHHHHHHHHHHHHHh-CCchHHHHHHHHHHHHHHccchhh
Confidence            999999999999999999999999864        22222222211222222222 222222333334445444444445


Q ss_pred             hhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehh
Q 014698          341 GLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFA  392 (420)
Q Consensus       341 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~  392 (420)
                      ......+..|+++|+++.|+.+...++++.++|.+.|.+.|+.|+|+..+..
T Consensus       349 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~  400 (405)
T TIGR00891       349 LPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS  400 (405)
T ss_pred             HHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence            5556667789999999999999999999999999999999998667655444

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=100.00  E-value=3.7e-31  Score=254.02  Aligned_cols=365  Identities=13%  Similarity=0.107  Sum_probs=253.8

Q ss_pred             cccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhc
Q 014698           37 GRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS  116 (420)
Q Consensus        37 g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~  116 (420)
                      +.....+.....+++++.+++.||+|||+++++++++.+++++++++ +++++.++++|++.|++.+...+...++++|+
T Consensus       205 g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~af-a~s~~~llv~R~l~G~g~g~~~p~~~~~isE~  283 (742)
T TIGR01299       205 GMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSF-VQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEF  283 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33444555566677889999999999999999999999999998876 89999999999999999999999999999999


Q ss_pred             CCccccchhhHHHHhhhhhHHHHHHhhHHHhhhc-------------cchhHHHHHHHHHHHHHHHHhhhcccCcccCCC
Q 014698          117 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-------------LGWESVFYIFGLLGIAWFSGFKILQEGETSNGA  183 (420)
Q Consensus       117 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~-------------~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (420)
                      +|+++|++.+++...++.+|.++++.++..+...             .+||+.+++.++++++.++..+++||+|++...
T Consensus       284 ~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~  363 (742)
T TIGR01299       284 LAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLE  363 (742)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence            9999999999999999999999999888776643             368999999888888877888899999876332


Q ss_pred             CcCccchhh--------h------hhhhh-----hh--hhh---hhccccc-----------------ccchhhhhhc--
Q 014698          184 TLAPRSNYI--------N------MKKSL-----SA--SLE---EMGESLK-----------------DVPWKAIFRS--  220 (420)
Q Consensus       184 ~~~~~~~~~--------~------~~~~~-----~~--~~~---~~~~~~~-----------------~~~~~~~~~~--  220 (420)
                      +.+.++...        +      .....     ..  ..+   +..+...                 +.+++++++.  
T Consensus       364 ~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~  443 (742)
T TIGR01299       364 NGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEV  443 (742)
T ss_pred             CCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccH
Confidence            221111100        0      00000     00  000   0000000                 0123444443  


Q ss_pred             -HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhh----h-----------------CCCc----------------------
Q 014698          221 -KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE----L-----------------SLNL----------------------  256 (420)
Q Consensus       221 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----------------g~~~----------------------  256 (420)
                       ++.+.+.+.+++..++++++..|+|.++++.    +                 +++.                      
T Consensus       444 ~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  523 (742)
T TIGR01299       444 REITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKS  523 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccc
Confidence             3446667788888999999999999876441    0                 0000                      


Q ss_pred             -----------------------------------------------------------------------chhhHHHHh
Q 014698          257 -----------------------------------------------------------------------TEAAWVSIL  265 (420)
Q Consensus       257 -----------------------------------------------------------------------~~~~~~~~~  265 (420)
                                                                                             ........+
T Consensus       524 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l  603 (742)
T TIGR01299       524 VSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFL  603 (742)
T ss_pred             cccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHH
Confidence                                                                                   011233456


Q ss_pred             hHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhh
Q 014698          266 PPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCT  345 (420)
Q Consensus       266 ~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  345 (420)
                      ..++.+++.++.++++||+|||         ..+..+.++.+++.++.....+ ....++..++.+++.+...+.....+
T Consensus       604 ~~l~~i~G~il~g~L~Dr~GRr---------~~l~~~~~lsai~~ll~~~~~s-~~~ll~~~~l~g~~~~~~~~~~~a~~  673 (742)
T TIGR01299       604 GTLAVLPGNIVSALLMDKIGRL---------RMLAGSMVLSCISCFFLSFGNS-ESAMIALLCLFGGLSIAAWNALDVLT  673 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCH---------HHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6788899999999999999963         3344555555555444444332 23333334455665555555566666


Q ss_pred             hhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCCCC
Q 014698          346 HQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQN  415 (420)
Q Consensus       346 ~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (420)
                      .+.+|++.|++++|+.+....+|++++|.+.+.+.+.  +...++++.+++.++++++.+ .+++++++.
T Consensus       674 aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~--~~~~pf~i~a~~lll~~ll~~-~LPET~~~~  740 (742)
T TIGR01299       674 VELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI--TKAAPILFASAALACGGLLAL-KLPDTRGQV  740 (742)
T ss_pred             HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHH-hCCCCcccc
Confidence            7778999999999999999999999999999998875  344566666665555555444 446666543

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=100.00  E-value=1.9e-30  Score=237.77  Aligned_cols=314  Identities=17%  Similarity=0.184  Sum_probs=233.1

Q ss_pred             hhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccc
Q 014698           44 LKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERS  123 (420)
Q Consensus        44 ~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~  123 (420)
                      .....++..+.+++.||++|||++..+.++.+++.+++++ +++++.+++.|+++|++.+...+...+++.|++|+|+|+
T Consensus        65 ~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~  143 (394)
T PRK10213         65 AFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSF-ANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVP  143 (394)
T ss_pred             HHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHH-HChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHH
Confidence            3344456777788899999999999999999999988876 899999999999999999999999999999999999999


Q ss_pred             hhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHh-hhcccCcccCCCCcCccchhhhhhhhhhhhh
Q 014698          124 RAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASL  202 (420)
Q Consensus       124 ~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (420)
                      +++++...+.++|..++|++++.+.+.+|||+.|++.++.+++..+.. ...||++++++ +                  
T Consensus       144 ~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~-~------------------  204 (394)
T PRK10213        144 KALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPS-H------------------  204 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCcccc-c------------------
Confidence            999999999999999999999999999999999999887766544332 33454321100 0                  


Q ss_pred             hhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhh
Q 014698          203 EEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFAD  282 (420)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d  282 (420)
                             ...+.++.+|+|.++...+..++.....+....+.+.++.+++|+++.+.+......+++.+++.++.+++.|
T Consensus       205 -------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~  277 (394)
T PRK10213        205 -------QKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILK  277 (394)
T ss_pred             -------chhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                   0001346778999888776666666666666667644444557999999999999999999999999999999


Q ss_pred             hhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHH
Q 014698          283 NLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITN  362 (420)
Q Consensus       283 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~  362 (420)
                      |.+         ++...............+.... ++........++.|++.+...+.......+..| ++++++.+...
T Consensus       278 r~~---------~~~l~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  346 (394)
T PRK10213        278 RSV---------KLALAGAPLVLAVSALVLTLWG-SDKIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQV  346 (394)
T ss_pred             ccc---------hhHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHH
Confidence            853         2232222222222222222222 223444445566787777666666656666665 56778888888


Q ss_pred             HhhhhhHHHHHHHHHHHhccCCceeeeehhhhHH
Q 014698          363 TVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIF  396 (420)
Q Consensus       363 ~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~  396 (420)
                      ...++|..+||.+.|.+.|.. ++...+...+..
T Consensus       347 ~~~~lg~~~G~~l~G~l~~~~-g~~~~~~~~~~~  379 (394)
T PRK10213        347 AVIQLANTCGAAIGGYALDNI-GLTSPLMLSGTL  379 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHhcc-ChhhHHHHHHHH
Confidence            888999999999999999986 565555554443

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=100.00  E-value=3.1e-31  Score=246.90  Aligned_cols=363  Identities=15%  Similarity=0.184  Sum_probs=244.4

Q ss_pred             hhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh---hchHHHHHHHHHHHHhccccchhhhHHHHHhcC
Q 014698           41 RIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL---AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSI  117 (420)
Q Consensus        41 ~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~  117 (420)
                      ..+.....++.+..+++.||.+||+++..+.++.+++.+..+..   .++++.+.+.|++.|++.+..++.....+.|++
T Consensus        68 ~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~  147 (438)
T TIGR00712        68 SAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWW  147 (438)
T ss_pred             HHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhc
Confidence            34444455567888888999999999999999999888776542   246778889999999999999998899999999


Q ss_pred             CccccchhhHHHHhhhhhHHHHHHhhHHHhhh-ccchhHHHHHHHHHHHHH-HHHhhhcccCcccCCCCcCccchhhhhh
Q 014698          118 PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-NLGWESVFYIFGLLGIAW-FSGFKILQEGETSNGATLAPRSNYINMK  195 (420)
Q Consensus       118 ~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-~~gwr~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (420)
                      |+++|++++++.+.+.++|..+++.+.+...+ ..+||..|++.++.+++. .+..+++||++++.+.++.++.+. ...
T Consensus       148 ~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  226 (438)
T TIGR00712       148 SQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRN-DYP  226 (438)
T ss_pred             CcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhccc-ccc
Confidence            99999999999999999999999888765444 569999999998887774 345555666543321111000000 000


Q ss_pred             hhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHH
Q 014698          196 KSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTS  275 (420)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  275 (420)
                      ++..++ ++.+.+.++...+.++|++.+|...+..++.....++...+.|.|+++..|+++.++++......+.++++++
T Consensus       227 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~  305 (438)
T TIGR00712       227 DDYNEK-AEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTL  305 (438)
T ss_pred             cccccc-cccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHH
Confidence            000000 0000000011123467899999888887777777888889999999998899999999999999999999999


Q ss_pred             hhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCC-CcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccch
Q 014698          276 IAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLG-LPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYA  354 (420)
Q Consensus       276 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  354 (420)
                      +.|++.||+++++      +....................... +........+..|.+.............+..|+++|
T Consensus       306 ~~g~l~dr~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  379 (438)
T TIGR00712       306 LCGWMSDKVFKGN------RGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAA  379 (438)
T ss_pred             HHHHHHHHhccCc------ccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhhe
Confidence            9999999997542      111111111111111221122211 122222223333433221111112234566788999


Q ss_pred             HHHHHHHHHhhhhhH-HHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCC
Q 014698          355 SILLGITNTVGAVPG-IVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSK  412 (420)
Q Consensus       355 g~~~g~~~~~~~~g~-~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (420)
                      |++.|+.+...++++ .++|.+.|.+.|+. +++..+.+..+..+++.+..+...++.|
T Consensus       380 g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~  437 (438)
T TIGR00712       380 GTAAGFTGLFGYLGGSVAASAIVGYTVDFF-GWDGGFMVMIGGSILAVILLIVVMIGEK  437 (438)
T ss_pred             eeehhhhchHHHhhhhhhcchhHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            999999999888875 68999999999986 6888888777666666666665555544

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>PRK12307 putative sialic acid transporter; Provisional

Probab=100.00  E-value=3.6e-31  Score=246.48  Aligned_cols=322  Identities=17%  Similarity=0.143  Sum_probs=223.2

Q ss_pred             chhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCc
Q 014698           40 GRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL  119 (420)
Q Consensus        40 ~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~  119 (420)
                      .........+++++.+++.||++||+++..+..+.++++...++ +++++.++++|+++|++.+...+....++.|++|+
T Consensus        59 ~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~  137 (426)
T PRK12307         59 ATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGL-ASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPK  137 (426)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCH
Confidence            33444555566888888899999999999999999999998886 89999999999999999999999999999999999


Q ss_pred             cccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhh
Q 014698          120 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLS  199 (420)
Q Consensus       120 ~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (420)
                      |+|++++++...+.++|.++++.+.+.+.+.++||+.|++..+..++........||++++++++.++++      ++  
T Consensus       138 ~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~------~~--  209 (426)
T PRK12307        138 HLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSGKG------KH--  209 (426)
T ss_pred             hHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhhccc------cc--
Confidence            9999999999999999999999999999998999999988654433333222223433221111100000      00  


Q ss_pred             hhhhhhcccccccchhhhhhcHHHHHHHHHHH---HhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHh
Q 014698          200 ASLEEMGESLKDVPWKAIFRSKAVWAMIYAHF---CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSI  276 (420)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  276 (420)
                         ++...+..+.++++++|+|.++.......   ......+....++|.|+++. |.++.+.+...+...++.++++++
T Consensus       210 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~  285 (426)
T PRK12307        210 ---SQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGE-GFDTGVVSNLMTAAAFGTVLGNIV  285 (426)
T ss_pred             ---cccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence               00000111224567888887765433222   22233344667899999874 999999999889999999999999


Q ss_pred             hhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHh--hhhhhhhhhhhhhccCccch
Q 014698          277 AAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLAL--SSFALSGLYCTHQDISPEYA  354 (420)
Q Consensus       277 ~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~  354 (420)
                      .+++.||+++|        + ....+.....+.............. .......+.+.  ............+.+|+++|
T Consensus       286 ~g~l~dr~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  355 (426)
T PRK12307        286 WGLCADRIGLK--------K-TFSIGLLMSFLFIFPLFRIPQDNYL-LLGACLFGLMATNVGVGGLVPKFLYDYFPLEVR  355 (426)
T ss_pred             HHHHHHHhccH--------H-HHHHHHHHHHHHHHHHHHHccccHH-HHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHH
Confidence            99999999864        2 2223332222222222211222222 22222333322  12222333445677899999


Q ss_pred             HHHHHHHHHhhhhhHHHHHHHHHHHhccCC
Q 014698          355 SILLGITNTVGAVPGIVGVALTGYLLDSTH  384 (420)
Q Consensus       355 g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~  384 (420)
                      |++.|+.+...++++.++|.+.|.+.|..+
T Consensus       356 g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g  385 (426)
T PRK12307        356 GLGTGLIYNLAATSGTFNSMAATWLGITMG  385 (426)
T ss_pred             hhhhhHHHHHHhHHHHHHHHHHHHHHHccc
Confidence            999999999999999999999999999873

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=100.00  E-value=4e-31  Score=250.49  Aligned_cols=336  Identities=19%  Similarity=0.176  Sum_probs=254.2

Q ss_pred             cccccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHH
Q 014698           35 RIGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIA  114 (420)
Q Consensus        35 ~~g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~  114 (420)
                      ..+.....+.....++.++.+++.||++|||++..+..+..+++++++. ++|++.+++.|+++|++.+...+...+++.
T Consensus        38 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~  116 (485)
T TIGR00711        38 QVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGV-APNLELMIIFRVIQGFGGGPLIPLSFSTLL  116 (485)
T ss_pred             hhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhC-cCCHHHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence            3444445555566667888888899999999999999999999999886 899999999999999999999999999999


Q ss_pred             hcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHH-HHhhhcccCcccCCCCcCccch---
Q 014698          115 RSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQEGETSNGATLAPRSN---  190 (420)
Q Consensus       115 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---  190 (420)
                      |++|+++|++++++...+..+|..+||.+++++.++++||+.|++.++++++.. +..+..||+++.++ ++.|...   
T Consensus       117 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~g~~l  195 (485)
T TIGR00711       117 NIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAAS-ENFDFLGLLL  195 (485)
T ss_pred             HHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccccc-CCCcHHHHHH
Confidence            999999999999999999999999999999999999999999999888776654 34445555433222 1111110   


Q ss_pred             ------------hhhhhhhhhhh------------------hhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHH
Q 014698          191 ------------YINMKKSLSAS------------------LEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTC  240 (420)
Q Consensus       191 ------------~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (420)
                                  ....++++.++                  .+|.+++++..+ .+++|+|+++...+..++..+..+..
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (485)
T TIGR00711       196 LSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVD-LRLFKYRNFTIGCVYMSLLGLGLYGS  274 (485)
T ss_pred             HHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccC-HHHHcCCChHHHHHHHHHHHHHHHHH
Confidence                        00000111100                  012222222222 36788999988888888888888888


Q ss_pred             hhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh--hcCC
Q 014698          241 LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS--IDLG  318 (420)
Q Consensus       241 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  318 (420)
                      ..+.|.|+++.+|+++.+++.......++.+++.++.|++.||+++|        + ....+............  ...+
T Consensus       275 ~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~--------~-~~~~g~~~~~~~~~~~~~~~~~~  345 (485)
T TIGR00711       275 FYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPR--------K-LVTIGLILYAVGFYWRAFTFTPD  345 (485)
T ss_pred             HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcH--------H-HHHHHHHHHHHHHHHHhccCCCC
Confidence            89999999998999999999999999999999999999999999863        2 23333333333333322  2222


Q ss_pred             Cc-HHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc
Q 014698          319 LP-HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS  382 (420)
Q Consensus       319 ~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~  382 (420)
                      .. .......++.|++.+....+......+..|+++++++.|+.+..+.+|+.+|+.+.+.+.++
T Consensus       346 ~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~  410 (485)
T TIGR00711       346 TPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN  410 (485)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            23 33344456677877766666666677788999999999999999999999999999999875

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>PRK15075 citrate-proton symporter; Provisional

Probab=100.00  E-value=2e-30  Score=241.21  Aligned_cols=306  Identities=14%  Similarity=0.108  Sum_probs=209.6

Q ss_pred             HHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHH--------HHHHHHHHHHhccccchhhhHHHHHhcCCcc
Q 014698           49 LLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMP--------GLVLSRVLVGIGEGVSPSAATDLIARSIPLE  120 (420)
Q Consensus        49 ~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~  120 (420)
                      +++++.+++.||+||||+++.+..++.+++.++++ +++++        .++++|+++|++.+...+....+++|++|++
T Consensus        71 ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~  149 (434)
T PRK15075         71 LGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAF-VPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPG  149 (434)
T ss_pred             hHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcc
Confidence            35678899999999999999999999999999986 88876        4689999999999999999999999999999


Q ss_pred             ccchhhHHHHhhhhhHHHHHHhhHHHhh--------hccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhh
Q 014698          121 ERSRAVSFVFGGLSFGSVAGLLLAPPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYI  192 (420)
Q Consensus       121 ~r~~~~~~~~~~~~~g~~~g~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (420)
                      +|++++++...+.++|..+++.+++.+.        +.+|||++|++..+...+........||+++..+++        
T Consensus       150 ~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~--------  221 (434)
T PRK15075        150 RKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARK--------  221 (434)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhh--------
Confidence            9999999999999898888888877653        467999999875543322222111112211000000        


Q ss_pred             hhhhhhhhhhhhhcccccccchhhhhhcHHHHHH-HHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHH
Q 014698          193 NMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAM-IYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASV  271 (420)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  271 (420)
                                   ++...+..+++..++++.+.. ....++.....+....|.|.|+++.+|++..+.++......++.+
T Consensus       222 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~  288 (434)
T PRK15075        222 -------------HRPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNF  288 (434)
T ss_pred             -------------hccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence                         000001112334455555443 333444556677788899999998889999999988888899999


Q ss_pred             HHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHH-HhhcCCCcH-HHHHHHHHHHHHhhhhhhhhhhhhhhcc
Q 014698          272 LVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTL-SSIDLGLPH-WEIVGILTAGLALSSFALSGLYCTHQDI  349 (420)
Q Consensus       272 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~  349 (420)
                      ++.++.|+++||+++|        +................ .....+... ......++.+++.+...+.......+..
T Consensus       289 ~~~~~~g~l~Dr~g~r--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~  360 (434)
T PRK15075        289 IWLPIGGALSDRIGRR--------PVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVM  360 (434)
T ss_pred             HHHHHHHHHHHHhcch--------HHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHC
Confidence            9999999999999974        22222221111111111 111112122 2222233445555544444445566778


Q ss_pred             CccchHHHHHHHHHhhh-hhHHHHHHHHHHHhccCC
Q 014698          350 SPEYASILLGITNTVGA-VPGIVGVALTGYLLDSTH  384 (420)
Q Consensus       350 ~~~~~g~~~g~~~~~~~-~g~~~~~~~~g~l~~~~~  384 (420)
                      |++.|+++.|+.+.... +++.++|.+.|.+.|..+
T Consensus       361 p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g  396 (434)
T PRK15075        361 PAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG  396 (434)
T ss_pred             CCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence            99999999999766555 468889999999999874

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=100.00  E-value=9.2e-31  Score=239.92  Aligned_cols=331  Identities=16%  Similarity=0.118  Sum_probs=241.2

Q ss_pred             cccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhc
Q 014698           37 GRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS  116 (420)
Q Consensus        37 g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~  116 (420)
                      |.....+.....++++..+++.||+|||+++..+.++..++.+.+++ ++|++.+++.|++.|++.+...+.....+.|+
T Consensus        41 g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  119 (377)
T TIGR00890        41 AIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAI-ADSLAALYLTYGLASAGVGIAYGIALNTAVKW  119 (377)
T ss_pred             HHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHH
Confidence            33334444555566788888899999999999999999999998886 99999999999999999998888888899999


Q ss_pred             CCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhh-cccCcccCCCCcCccchhhhhh
Q 014698          117 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMK  195 (420)
Q Consensus       117 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  195 (420)
                      +| |+|+++.++...+.++|..+++++.+.+.+..|||+.|++.++..++..+..++ ++++++++++++ ++.      
T Consensus       120 ~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------  191 (377)
T TIGR00890       120 FP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTN-IEV------  191 (377)
T ss_pred             cC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhccccC-ccc------
Confidence            87 679999999999999999887777777778889999999999888776544444 443332211110 000      


Q ss_pred             hhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHH
Q 014698          196 KSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTS  275 (420)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  275 (420)
                                  +.++.+.++.+|+|+++...+..++..........+.+.|.++ +|.+..+.+...+...+..+++++
T Consensus       192 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  258 (377)
T TIGR00890       192 ------------SVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRP  258 (377)
T ss_pred             ------------chhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHH
Confidence                        0001124567788888877776666666666666677777665 688888889999999999999999


Q ss_pred             hhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcH-HHHHHHHHHHHHhhhhhhhhhhhhhhccCccch
Q 014698          276 IAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPH-WEIVGILTAGLALSSFALSGLYCTHQDISPEYA  354 (420)
Q Consensus       276 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  354 (420)
                      +.|++.||+++|         .....+..............++... .......+.+.+.+...........+..|+++|
T Consensus       259 ~~g~l~dr~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~  329 (377)
T TIGR00890       259 FLGALSDKIGRQ---------KTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANS  329 (377)
T ss_pred             HHHHHHHHHhhh---------hhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhh
Confidence            999999999864         2222333333333333333222222 222333455666554444445556677899999


Q ss_pred             HHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHH
Q 014698          355 SILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYL  399 (420)
Q Consensus       355 g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~  399 (420)
                      +++.|+.+....+|..++|.+.|.+.|.. +++..|.+.+++.++
T Consensus       330 ~~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~f~~~~~~~~~  373 (377)
T TIGR00890       330 AANYGFLYTAKAVAGIFGGLIASHALTEI-GFEYTFIVTGAFALT  373 (377)
T ss_pred             hhHhHHHHHHHHHHHHHHHHHHHHHHhhh-chhhHHHHHHHHHHH
Confidence            99999999999999999999999999986 688777776654443

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=100.00  E-value=1.1e-31  Score=250.29  Aligned_cols=345  Identities=15%  Similarity=0.158  Sum_probs=246.9

Q ss_pred             HhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHH-HHHHHHhccccchhhhHHHHHhcCCccccchh
Q 014698           47 TNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVL-SRVLVGIGEGVSPSAATDLIARSIPLEERSRA  125 (420)
Q Consensus        47 ~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~  125 (420)
                      ..++..+.+++.||++||++++.+.++..++++++++ +++++.+++ .|+++|++.+...+...+++.|+++ ++|+++
T Consensus        67 ~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a  144 (455)
T TIGR00892        67 LYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASF-SSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLA  144 (455)
T ss_pred             HHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHH
Confidence            3445778888899999999999999999999988876 888888765 5799999998777777888999996 789999


Q ss_pred             hHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCc-cch--hhhhhhhhhhhh
Q 014698          126 VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAP-RSN--YINMKKSLSASL  202 (420)
Q Consensus       126 ~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~  202 (420)
                      .++.+.+..+|..++|++++.+.+.+|||+.|++.++..++..+..+++.+.++.++..+.+ ++.  .....++. ...
T Consensus       145 ~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  223 (455)
T TIGR00892       145 NGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKL-SKK  223 (455)
T ss_pred             HHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccc-ccc
Confidence            99999999999999999999999999999999999988776544444443322211100000 000  00000000 000


Q ss_pred             hhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhh
Q 014698          203 EEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFAD  282 (420)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d  282 (420)
                      ...++..+..+ .+++++|.++......++.....+....++|.|+++ .|++..+++...+..+++.++++++.+++.|
T Consensus       224 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d  301 (455)
T TIGR00892       224 STAEKINRFLD-FSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAG  301 (455)
T ss_pred             chhhhhhhhcc-hHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            00000011111 257889999988888787777777888899999987 5999999999999999999999999999999


Q ss_pred             hhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHH
Q 014698          283 NLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITN  362 (420)
Q Consensus       283 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~  362 (420)
                      |...++.     ++.....+.........+.... ++.....+..++.|++.+...+.......+.+|+++++++.|+.+
T Consensus       302 ~~~~~~~-----~~~~~~~~~~~~~l~~ll~~~~-~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~  375 (455)
T TIGR00892       302 LKWIRPH-----VQYLFSFALLFNGLTHLLCALA-GDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVT  375 (455)
T ss_pred             ccccCHH-----HHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHH
Confidence            7422100     2233323333222222222222 223444555677788777666666677777789999999999999


Q ss_pred             HhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHH
Q 014698          363 TVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGT  402 (420)
Q Consensus       363 ~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~  402 (420)
                      ...++|++++|.+.|.+.|..++++..|+..+++.+++.+
T Consensus       376 ~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~  415 (455)
T TIGR00892       376 IVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL  415 (455)
T ss_pred             HHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence            9999999999999999999877788888887776555544

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=100.00  E-value=8.8e-31  Score=247.87  Aligned_cols=367  Identities=15%  Similarity=0.086  Sum_probs=234.5

Q ss_pred             chhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhch------HHHHHHHHHHHHhccccchhhhHHHH
Q 014698           40 GRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGF------MPGLVLSRVLVGIGEGVSPSAATDLI  113 (420)
Q Consensus        40 ~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i  113 (420)
                      .........+++++.+++.||+|||+++..+.++..++++++++ +++      ++.++++|+++|++.+...+....++
T Consensus        62 ~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~  140 (502)
T TIGR00887        62 NGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGL-SPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIIT  140 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH-ccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence            33444455566888888899999999999999999999988775 554      78899999999999999999999999


Q ss_pred             HhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhh-----------------------ccchhHHHHHHHHHHHHHHHH
Q 014698          114 ARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-----------------------NLGWESVFYIFGLLGIAWFSG  170 (420)
Q Consensus       114 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-----------------------~~gwr~~f~~~~~~~~~~~~~  170 (420)
                      +|++|+++|++++++.+....+|.++++.++..+..                       .++||+.|.+.++++++..+.
T Consensus       141 ~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~  220 (502)
T TIGR00887       141 SEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYF  220 (502)
T ss_pred             HHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999988876532                       247999999988888887777


Q ss_pred             hhhcccCcccCCCCcCccc-hhh--h---hh--hhhhhhhhhh--cccccccchhhhhhc---HHH----HHHHHHHHHh
Q 014698          171 FKILQEGETSNGATLAPRS-NYI--N---MK--KSLSASLEEM--GESLKDVPWKAIFRS---KAV----WAMIYAHFCG  233 (420)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~-~~~--~---~~--~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~  233 (420)
                      .+++||+|++...++++++ ...  .   ..  ++..++.++.  .++..+.++++++++   ++.    +......+..
T Consensus       221 ~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  300 (502)
T TIGR00887       221 RLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLL  300 (502)
T ss_pred             HHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence            8899999986322222111 100  0   00  0000000000  001112346677653   222    1122233444


Q ss_pred             HHHHHHHhhhhhhHhhhhhCCCcchhhH------------HHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHH
Q 014698          234 SWGHYTCLSWLPTYFSEELSLNLTEAAW------------VSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTI  301 (420)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~  301 (420)
                      ...+++...+.|.++++ .|++..+.+.            ......++.+++.++.+++.||+|||        +..+ .
T Consensus       301 ~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR--------~~l~-~  370 (502)
T TIGR00887       301 DIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRK--------PIQL-M  370 (502)
T ss_pred             HHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch--------hHHH-H
Confidence            55666777789999976 4876543221            12334456667888999999999974        2222 2


Q ss_pred             HHHHhHHHH-HHHh-hcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHH
Q 014698          302 AFLSPAVCM-TLSS-IDL-GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGY  378 (420)
Q Consensus       302 ~~~~~~~~~-~~~~-~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~  378 (420)
                      +.....++. .+.. ... ..........+....+.....+.......|.+|++.|+++.|+.+...+++++++|.+.+.
T Consensus       371 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~  450 (502)
T TIGR00887       371 GFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLY  450 (502)
T ss_pred             HHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhh
Confidence            222222221 1111 111 1111111111111111111222333344566889999999999999999999999999999


Q ss_pred             HhccCC---------ceeeeehhhhHHHHHHHHHHhhhccCCCCCCCCC
Q 014698          379 LLDSTH---------SWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFST  418 (420)
Q Consensus       379 l~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (420)
                      +.|..+         ++...+.+.+++.+++.+. +++.+|+++++.+|
T Consensus       451 l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~-~~~lpEt~~~~lee  498 (502)
T TIGR00887       451 LAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF-TLLIPETKGKSLEE  498 (502)
T ss_pred             hhccccccccccccccchHHHHHHHHHHHHHHHH-heEeccCCCCCHHh
Confidence            998531         2334566666655555444 34557777766554

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>PRK10489 enterobactin exporter EntS; Provisional

Probab=100.00  E-value=5.1e-31  Score=244.34  Aligned_cols=348  Identities=12%  Similarity=-0.002  Sum_probs=246.9

Q ss_pred             cccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHH----hhchHHHHHHHHHHHHhccccchhhhHHH
Q 014698           37 GRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPL----LAGFMPGLVLSRVLVGIGEGVSPSAATDL  112 (420)
Q Consensus        37 g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~  112 (420)
                      |...........+++.+.+++.||++|||++..+..+.+++....+.    ..++++.+++.|+++|++.+...+...++
T Consensus        55 g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~  134 (417)
T PRK10489         55 GLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAA  134 (417)
T ss_pred             HHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            33333444455556788888899999999998888877776654432    14678889999999999988888888999


Q ss_pred             HHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhh
Q 014698          113 IARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYI  192 (420)
Q Consensus       113 i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (420)
                      +.|++|+++|+++.++.....++|..+||.+++.+.+..+||+.|++.++..++..+..+.+|++++++++++  +.   
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~---  209 (417)
T PRK10489        135 TPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPALPPPPQPRE--HP---  209 (417)
T ss_pred             hhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCcccc--cc---
Confidence            9999999999999999999999999999999999999889999999888777766666667776543221110  00   


Q ss_pred             hhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHH
Q 014698          193 NMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVL  272 (420)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  272 (420)
                            .+   +     ....++.++++|.++...+..++.. .......+.|.|+++.+|.++.+.+++.+...++.++
T Consensus       210 ------~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~i  274 (417)
T PRK10489        210 ------LR---S-----LLAGFRFLLASPVVGGIALLGGLLT-MASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAAL  274 (417)
T ss_pred             ------hH---H-----HHHHHHHHHcChHHHHHHHHHHHHH-HHHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHH
Confidence                  00   0     0112345677887766655544433 2456677899999987899999999999999999999


Q ss_pred             HHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCcc
Q 014698          273 VTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPE  352 (420)
Q Consensus       273 ~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  352 (420)
                      +.++.+++.||.+++        +.. ..+.....+........+ +.....+..++.|.+.+...+.......+..|++
T Consensus       275 g~~~~~~l~~~~~~~--------~~l-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~  344 (417)
T PRK10489        275 GALTSGWLAHSARPG--------LLM-LLSTLGSFLAVGLFGLMP-MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDE  344 (417)
T ss_pred             HHHHHHHhhhccCcc--------hHH-HHHHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHH
Confidence            999999999985432        222 222223333333333222 2233344455666666544444445566678889


Q ss_pred             chHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCCCC
Q 014698          353 YASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQN  415 (420)
Q Consensus       353 ~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (420)
                      .||+++|+.+...++|..++|.+.|.+.|.. ++...+...+++.++.+++.....++.|+++
T Consensus       345 ~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (417)
T PRK10489        345 MLGRINGLWTAQNVTGDAIGAALLGGLGAMM-TPVASASASGFGLLIIGVLLLLVLGELRRFR  406 (417)
T ss_pred             HHHHHHHHHHHHHhhhHhHHHHHHHHHHHHh-chhhHHHHHHHHHHHHHHHHHHhcccccccc
Confidence            9999999999999999999999999999987 5555666666655565555555555544443

>PRK03699 putative transporter; Provisional

Probab=99.98  E-value=6.4e-30  Score=235.01  Aligned_cols=342  Identities=16%  Similarity=0.142  Sum_probs=242.7

Q ss_pred             hhhhhccccccch---hhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccc
Q 014698           29 KKWVGLRIGRRGR---IYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS  105 (420)
Q Consensus        29 ~~~l~~~~g~~~~---l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~  105 (420)
                      .++++.+..+.+.   .......++.++.+++.||++|||++..+..+..++..+.++ +++++.+++.|+++|++.+..
T Consensus        34 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~-~~~~~~~~~~~~l~G~~~g~~  112 (394)
T PRK03699         34 AEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMF-SHSLALFSIAMFVLGVVSGIT  112 (394)
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH-cchHHHHHHHHHHHHHhhHhh
Confidence            4444444333333   333445566788888899999999999999999999988886 899999999999999999988


Q ss_pred             hhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhh-ccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCC
Q 014698          106 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGAT  184 (420)
Q Consensus       106 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (420)
                      .+...+++.|++|+++|+++++..+....+|..++|.+.+.+.+ ..|||+.|.+.+++.++..+..++ .+.|+.++++
T Consensus       113 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~-~~~p~~~~~~  191 (394)
T PRK03699        113 MSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLF-SEFPALGKHA  191 (394)
T ss_pred             ccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh-cCCccccccC
Confidence            88899999999999999999999999999999999999887764 579999999988877665443332 2222111110


Q ss_pred             cCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHH
Q 014698          185 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI  264 (420)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  264 (420)
                      + +++                 ++..    ++ ..++.++...+..++.....+....|.|.|+++.+|+|+.+.+.+.+
T Consensus       192 ~-~~~-----------------~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~  248 (394)
T PRK03699        192 P-KAD-----------------KPVA----KE-KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVS  248 (394)
T ss_pred             c-ccc-----------------Cccc----cc-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHH
Confidence            0 000                 0000    01 11466677777777777777888899999999888999999999999


Q ss_pred             hhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhh
Q 014698          265 LPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYC  344 (420)
Q Consensus       265 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  344 (420)
                      ...++..+++++.++++||+++|       + ... ...........+..... +..+.....+..|++.+...+.....
T Consensus       249 ~~~~~~~ig~~~~g~l~dr~~~~-------~-~l~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~G~~~~~~~~~~~~~  318 (394)
T PRK03699        249 NFWMAYMVGMWIFSFIVRFFDLQ-------R-ILT-VLAGLALVLMYLFVNTD-DPSHLLYAILGLGFFSSAIYTTIITL  318 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHhchh-------h-HHH-HHHHHHHHHHHHHHHcC-CchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999874       2 222 22222222222222222 23344444566666665444444443


Q ss_pred             hhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhh
Q 014698          345 THQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLA  407 (420)
Q Consensus       345 ~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (420)
                      ..+. .++++++..|......++|+.++|.+.|++.|.. +++..++..+++..++.+.....
T Consensus       319 ~~~~-~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~  379 (394)
T PRK03699        319 GSQQ-TKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHF-GLQAALLTANGLYAVVFVMCILL  379 (394)
T ss_pred             HHHH-ccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHh-CchhhhhhhHHHHHHHHHHHHHH
Confidence            3333 3455678889999999999999999999999986 57777777666665554443333

>TIGR00898 2A0119 cation transport protein

Probab=99.98  E-value=4.9e-30  Score=243.90  Aligned_cols=361  Identities=15%  Similarity=0.066  Sum_probs=243.2

Q ss_pred             cccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhc
Q 014698           37 GRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS  116 (420)
Q Consensus        37 g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~  116 (420)
                      +....++.....+++++.+++.||+|||+++..+.++..+++++.++ +++++.+++.|++.|++.+...+....++.|+
T Consensus       130 ~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~  208 (505)
T TIGR00898       130 DLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAF-SPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEF  208 (505)
T ss_pred             HHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH-cccHHHHHHHHHHHHhhccchHHHHHHHhhee
Confidence            33345556666777888999999999999999999999999998886 99999999999999999999999999999999


Q ss_pred             CCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhh
Q 014698          117 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKK  196 (420)
Q Consensus       117 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (420)
                      +|+++|+++.++...+..+|.+++|.++..+.+   ||+.|++.+++.++..+..+++||++++...+.+.++.....++
T Consensus       209 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~  285 (505)
T TIGR00898       209 LPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQR  285 (505)
T ss_pred             cChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHH
Confidence            999999999999999999999999998876653   99999999998887777778889987653322222111100000


Q ss_pred             -----------hhhhh--hhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHH
Q 014698          197 -----------SLSAS--LEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVS  263 (420)
Q Consensus       197 -----------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  263 (420)
                                 +....  .++..++.++.++++++++|+++...+......+.........+.+..+ .+.+..   ...
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~  361 (505)
T TIGR00898       286 IAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGN-LGGNIY---LDL  361 (505)
T ss_pred             HHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccc-cCCChH---HHH
Confidence                       00000  0111111223467889999988777665554444433333333333332 344432   333


Q ss_pred             HhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCc-HHHHHHHHHHHHHhhhhhhhhh
Q 014698          264 ILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLP-HWEIVGILTAGLALSSFALSGL  342 (420)
Q Consensus       264 ~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~  342 (420)
                      ...++..+++.++.+++.||+|||         ..........+++.+.....++.. .......++.+.+.+.......
T Consensus       362 ~~~~~~~i~~~~~~~~l~dr~grr---------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (505)
T TIGR00898       362 FISGLVELPAKLITLLLIDRLGRR---------YTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVY  432 (505)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCH---------HHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence            455677888899999999999964         333333333333333333333222 2333333444444444444555


Q ss_pred             hhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCCCCCCC
Q 014698          343 YCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFST  418 (420)
Q Consensus       343 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (420)
                      ....+.+|++.|+++.|+.+....+|++++|.+.+ +.+.  +...++.+.++..+++++.. .+.+++++++.++
T Consensus       433 ~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~--~~~~~~~~~~~~~~~~~~~~-~~lpet~~~~l~~  504 (505)
T TIGR00898       433 LYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEK--WLFLPLVLFGGLALLAGILT-LFLPETKGVPLPE  504 (505)
T ss_pred             HHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHH--HHhhHHHHHHHHHHHHHHHH-HcCcCCCCCCCCC
Confidence            55667789999999999999999999999999998 4443  34456666666555555544 3456666665543

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.98  E-value=1.2e-30  Score=247.15  Aligned_cols=370  Identities=16%  Similarity=0.120  Sum_probs=242.2

Q ss_pred             ccccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh--hchHHHHHHHHHHHHhccccchhhhHHHH
Q 014698           36 IGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL--AGFMPGLVLSRVLVGIGEGVSPSAATDLI  113 (420)
Q Consensus        36 ~g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~i  113 (420)
                      .+.....+.....++.++.+++.||++|||++..+.+++.++.+++...  ..+++.+++.|+++|++.+...+....++
T Consensus        73 ~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i  152 (481)
T TIGR00879        73 WGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYL  152 (481)
T ss_pred             HHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHH
Confidence            3434444555556678888889999999999999999999998888542  23455899999999999999999999999


Q ss_pred             HhcCCccccchhhHHHHhhhhhHHHHHHhhH---HHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccch
Q 014698          114 ARSIPLEERSRAVSFVFGGLSFGSVAGLLLA---PPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSN  190 (420)
Q Consensus       114 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~---~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (420)
                      +|++|+++|++++++.+.+..+|..+++.++   ....+..+||+.|++.++..++..+..+++||+++....++++++.
T Consensus       153 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  232 (481)
T TIGR00879       153 SEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEA  232 (481)
T ss_pred             HccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHH
Confidence            9999999999999999999999999999999   6666778999999997777666666677788875421111110000


Q ss_pred             hhh--h-------hhhhh------hhhhhhcccccccchhhhhh------cHHHHHHHHHHHHhHHHHHHHhhhhhhHhh
Q 014698          191 YIN--M-------KKSLS------ASLEEMGESLKDVPWKAIFR------SKAVWAMIYAHFCGSWGHYTCLSWLPTYFS  249 (420)
Q Consensus       191 ~~~--~-------~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (420)
                      ...  +       +.+..      ...++..++..+..+++.++      .+.++...+..+...........+.|.+.+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (481)
T TIGR00879       233 RKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFE  312 (481)
T ss_pred             HHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHH
Confidence            000  0       00000      00000000000111222222      222333333333333333344556677666


Q ss_pred             hhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh---hcCCC------c
Q 014698          250 EELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS---IDLGL------P  320 (420)
Q Consensus       250 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------~  320 (420)
                      + .|++..+.+.......+..+++.++.+++.||+++|        +.. ..+.....++.....   .....      .
T Consensus       313 ~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (481)
T TIGR00879       313 N-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRR--------PLL-LIGAAGMAICLFVLGILGASFVTGSSKSSG  382 (481)
T ss_pred             H-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcch--------HHH-HHHHHHHHHHHHHHHHHhhcccCCcccchh
Confidence            5 599998888888899999999999999999999964        222 222222222222222   11111      2


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhh-hhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHH
Q 014698          321 HWEIVGILTAGLALSSFALSGL-YCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYL  399 (420)
Q Consensus       321 ~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~  399 (420)
                      ........+.+.+.+....+.. ....+..|+++|+++.|+.+...++|++++|.+.+.+.++. ++...|++.+++.++
T Consensus       383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~-~~~~~f~~~~~~~~~  461 (481)
T TIGR00879       383 NVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESI-GVGGVFIFFGGLNVL  461 (481)
T ss_pred             HHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CccceehhHHHHHHH
Confidence            2222223333333332333333 33356678899999999999999999999999999999986 688888888777777


Q ss_pred             HHHHHhhhccCCCCCCC
Q 014698          400 TGTIVWLAFASSKPQNF  416 (420)
Q Consensus       400 ~~~~~~~~~~~~~~~~~  416 (420)
                      +.+..+...+++++++.
T Consensus       462 ~~i~~~~~~~~~~~~~~  478 (481)
T TIGR00879       462 GLIFVYFFLPETKGRTL  478 (481)
T ss_pred             HHHHHheecccCCCCCh
Confidence            77666666666555443

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=99.98  E-value=5.3e-30  Score=240.23  Aligned_cols=342  Identities=13%  Similarity=0.037  Sum_probs=233.5

Q ss_pred             hHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccch
Q 014698           45 KDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR  124 (420)
Q Consensus        45 ~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~  124 (420)
                      ....+++++.+++.||+++|+++..+.++++++.++.++ +++++.+++.|++.|++.+... ....+++|++|+++|++
T Consensus        82 ~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~-~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~  159 (476)
T PLN00028         82 SGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSL-VSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGT  159 (476)
T ss_pred             HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeH
Confidence            344456788899999999999999999999999888876 8899999999999999887654 45678999999999999


Q ss_pred             hhHHHHhhhhhHHHHHHhhHHHhhh---------ccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhh
Q 014698          125 AVSFVFGGLSFGSVAGLLLAPPIIE---------NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMK  195 (420)
Q Consensus       125 ~~~~~~~~~~~g~~~g~~l~~~l~~---------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (420)
                      ++++.....++|..+++.+.+.+..         ..|||+.|++.+++.++..+..+++++++|+.+.++  .++     
T Consensus       160 a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~~--~~~-----  232 (476)
T PLN00028        160 ANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYRE--LKK-----  232 (476)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchhh--HHh-----
Confidence            9999988888888777666654432         248999999999988876666666665544321100  000     


Q ss_pred             hhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHH
Q 014698          196 KSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTS  275 (420)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  275 (420)
                      +.      +.++......+++.++++++|...+..+......+....+.|.|+.+.+|+++.+++.+.+...++.+++++
T Consensus       233 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~  306 (476)
T PLN00028        233 SG------TMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARP  306 (476)
T ss_pred             cC------ccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHh
Confidence            00      000000012245677888888887777666666677788999999888899999999999999999999999


Q ss_pred             hhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchH
Q 014698          276 IAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYAS  355 (420)
Q Consensus       276 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g  355 (420)
                      +.|+++||+++|+..+  .|+........+..+........ ++.......+++.+.+.+........ ...+.+++++|
T Consensus       307 ~~G~lsDr~~~r~~~~--~r~~~~~~~~~l~~i~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~g  382 (476)
T PLN00028        307 AGGYLSDVAARRFGMR--GRLWALWIVQTLGGVFCIWLGRA-NSLGAAIVVMILFSIFVQAACGATFG-IVPFVSRRSLG  382 (476)
T ss_pred             hhHHHHHHHHHhcCcc--hhHHHHHHHHHHHHHHHHHhccc-chHHHHHHHHHHHHHHHHHhhhhhcc-cCcccChhhch
Confidence            9999999999763211  13333333333333322222222 22222333334444444333222222 23356678999


Q ss_pred             HHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhh
Q 014698          356 ILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLA  407 (420)
Q Consensus       356 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (420)
                      ++.|+.+...++|+.++|.+.+  .+..++|+..|++.+++.+++.++.++.
T Consensus       383 ~~~g~~~~~g~lg~~i~~~l~~--~~~~~~y~~~f~~~~~~~~i~~~~~~~~  432 (476)
T PLN00028        383 VISGLTGAGGNVGAVLTQLLFF--TGSSYSTETGISLMGVMIIACTLPVAFI  432 (476)
T ss_pred             hhhhhhhccccHHHHHHHHHHH--hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence            9999998877777777777654  2223578888988887777666655544

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=99.98  E-value=1.1e-29  Score=230.63  Aligned_cols=344  Identities=12%  Similarity=0.042  Sum_probs=240.6

Q ss_pred             hhhccccccchhhhhHHhHHh---hhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhh-----chHHHHHHHHHHHHhcc
Q 014698           31 WVGLRIGRRGRIYLKDTNLLE---LLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLA-----GFMPGLVLSRVLVGIGE  102 (420)
Q Consensus        31 ~l~~~~g~~~~l~~~~~~~~~---l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~  102 (420)
                      +++.+.++.+.+.......++   +..+++.||+|+|+++..+.+++++.++..++ +     ++++.+++.|++.|++ 
T Consensus        64 ~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~-a~~~~~~s~~~lli~r~l~Gig-  141 (462)
T PRK15034         64 GFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGI-AVQNPNTPFGIFIVIALLCGFA-  141 (462)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH-HHcccCCCHHHHHHHHHHHHHH-
Confidence            455555566656665555554   44566699999999999999999999998876 5     7999999999999998 


Q ss_pred             ccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhh-----h-------------ccchhHHHHHHHHHH
Q 014698          103 GVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII-----E-------------NLGWESVFYIFGLLG  164 (420)
Q Consensus       103 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~-----~-------------~~gwr~~f~~~~~~~  164 (420)
                      +..++.....+++|+|+++||+++|+.....++|..+++++...+.     +             ..+||.++++..++.
T Consensus       142 g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~  221 (462)
T PRK15034        142 GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLL  221 (462)
T ss_pred             HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHH
Confidence            7788999999999999999999999998777777776666654433     2             334888888888877


Q ss_pred             HHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhh
Q 014698          165 IAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWL  244 (420)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (420)
                      ++..+..++..++++.++.+                          ..+.++++|+|+.|...+.+++.+.++.++..++
T Consensus       222 iv~~i~~~~~~~~~~~~~~~--------------------------~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~l  275 (462)
T PRK15034        222 AIATIAAWSGMNDIASSRAS--------------------------IADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGF  275 (462)
T ss_pred             HHHHHHHHHhCCCccccccC--------------------------HHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence            77665555554443321110                          0114578999999999999999988999999999


Q ss_pred             hhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHH-HHhhcCC--Cc-
Q 014698          245 PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMT-LSSIDLG--LP-  320 (420)
Q Consensus       245 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~-  320 (420)
                      |.|.++.+  +............+...+.++++|+++||+|++        +............... ....+..  .+ 
T Consensus       276 p~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~--------~vl~~~~i~~~i~~~~~~l~lp~~~~~~~  345 (462)
T PRK15034        276 AMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGV--------RVTLINFIFMAIFSALLFLTLPGTGSGNF  345 (462)
T ss_pred             HHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCch--------HHHHHHHHHHHHHHHHHHHHhccccccHH
Confidence            99998854  333333333445677888899999999999974        2222222222222211 1111111  11 


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhhhhhhccCc---------------------cchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698          321 HWEIVGILTAGLALSSFALSGLYCTHQDISP---------------------EYASILLGITNTVGAVPGIVGVALTGYL  379 (420)
Q Consensus       321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---------------------~~~g~~~g~~~~~~~~g~~~~~~~~g~l  379 (420)
                      ......++....+.+.......-.+.+.+|+                     ++.|.+.|+......+|+++-|.+.|..
T Consensus       346 ~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~  425 (462)
T PRK15034        346 IAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMS  425 (462)
T ss_pred             HHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHH
Confidence            2222222333333343333333344344442                     2678999999999999999999999999


Q ss_pred             hccCCceeeeehhhhHHHHHHHHHHhhhccCCC
Q 014698          380 LDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSK  412 (420)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (420)
                      .+..|++...++...+..+++..+.+..+.++.
T Consensus       426 ~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r~~  458 (462)
T PRK15034        426 LNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRRK  458 (462)
T ss_pred             HHHcCCcHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence            999999999999998888888888777665543

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=99.98  E-value=3.5e-30  Score=243.52  Aligned_cols=369  Identities=15%  Similarity=0.090  Sum_probs=231.8

Q ss_pred             cccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh-----------hchHHHHHHHHHHHHhccccc
Q 014698           37 GRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL-----------AGFMPGLVLSRVLVGIGEGVS  105 (420)
Q Consensus        37 g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~r~l~G~~~~~~  105 (420)
                      +.....+.....+++++.+++.||+||||+++.+..++.++.+.+++.           .++++.++++|+++|++.|..
T Consensus        58 ~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~  137 (479)
T PRK10077         58 GFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLA  137 (479)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHH
Confidence            333444455566678999999999999999999999998888776541           123567889999999999999


Q ss_pred             hhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhh--------hccchhHHHHHHHHHHHHHHHHhhhcccC
Q 014698          106 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEG  177 (420)
Q Consensus       106 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~  177 (420)
                      .+...++++|++|+|+|++++++.+.+..+|.++++.++..+.        +.+|||+.|++.+++.++..+..+++||+
T Consensus       138 ~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s  217 (479)
T PRK10077        138 SMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPET  217 (479)
T ss_pred             hhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCC
Confidence            9999999999999999999999999999999999988776553        35699999999888887766667788888


Q ss_pred             cccCCCCcCccchhhhhh-----hhhhhhhhhhcccc--cccchhhhhhcHHHHHH---HHHHHHhHHHHHHHhhhhhhH
Q 014698          178 ETSNGATLAPRSNYINMK-----KSLSASLEEMGESL--KDVPWKAIFRSKAVWAM---IYAHFCGSWGHYTCLSWLPTY  247 (420)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  247 (420)
                      +++...++++++.....+     ++.....++..+..  +....+..+........   ....+......+....+.|.+
T Consensus       218 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i  297 (479)
T PRK10077        218 PRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEI  297 (479)
T ss_pred             cHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHH
Confidence            654222111111100000     00000000000000  00000011110000000   111111122233344566777


Q ss_pred             hhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh-h-cCC-CcHHHH
Q 014698          248 FSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS-I-DLG-LPHWEI  324 (420)
Q Consensus       248 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~-~~~~~~  324 (420)
                      .++ .|.+...........++..+++.++.++++||+++|        +. ...+....+++..... . ..+ ......
T Consensus       298 ~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r--------~~-~i~~~~~~~v~~~~l~~~~~~~~~~~~~~  367 (479)
T PRK10077        298 FKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRK--------PL-QIIGALGMAIGMFSLGTAFYTQAPGIVAL  367 (479)
T ss_pred             HHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCh--------HH-HHHhHHHHHHHHHHHHHHHhcCcccHHHH
Confidence            665 588877777777788888999999999999999964        22 2333333333222221 1 111 122222


Q ss_pred             HHHHHHHHHhhhh-hhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHh------ccCCceeeeehhhhHHH
Q 014698          325 VGILTAGLALSSF-ALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL------DSTHSWSMSLFAPSIFF  397 (420)
Q Consensus       325 ~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~------~~~~~~~~~~~~~~~~~  397 (420)
                      ......+.+.+.. .+.......+.+|+++|+++.|+.+...+++..+++.+.+.+.      |.. ++...|++.++..
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~  446 (479)
T PRK10077        368 LSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHF-HNGFSYWIYGCMG  446 (479)
T ss_pred             HHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhc-cCccHHHHHHHHH
Confidence            3333344444322 2334455667788899999999999999999999987776554      443 4556677777666


Q ss_pred             HHHHHHHhhhccCCCCCCC
Q 014698          398 YLTGTIVWLAFASSKPQNF  416 (420)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~~  416 (420)
                      +++.++.+.+.+|+|+++.
T Consensus       447 ~~~~~~~~~~~~e~~~~~~  465 (479)
T PRK10077        447 VLAALFMWKFVPETKGKTL  465 (479)
T ss_pred             HHHHHHHHhccccCCCCCH
Confidence            6666666666666665543

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=99.98  E-value=8e-31  Score=238.05  Aligned_cols=312  Identities=24%  Similarity=0.347  Sum_probs=232.5

Q ss_pred             chhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCc
Q 014698           40 GRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL  119 (420)
Q Consensus        40 ~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~  119 (420)
                      .........++.++.+++.||++|||++..+.++..++.++..+ +++++.+++.|++.|++.+...+...+++.|++|+
T Consensus        38 ~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~  116 (352)
T PF07690_consen   38 FSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF-ASNFWLLLIARFLLGIGSGFFSPASNALIADWFPP  116 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh-hhhHHHHhhhccccccccccccccccccccccchh
Confidence            33344445566888888899999999999999999999666654 67888999999999999999999999999999999


Q ss_pred             cccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHH-hhhcccCcccCCCCcCccchhhhhhhhh
Q 014698          120 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG-FKILQEGETSNGATLAPRSNYINMKKSL  198 (420)
Q Consensus       120 ~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (420)
                      |+|++++++.+...++|.+++|.+++.+.+.++||+.|++.++..++..++ ..++++++++++++++++++        
T Consensus       117 ~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~--------  188 (352)
T PF07690_consen  117 EERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESE--------  188 (352)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT--------
T ss_pred             hhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcccccccccccccc--------
Confidence            999999999999999999999999999999999999999999998886543 34455544433332221110        


Q ss_pred             hhhhhhhccccccc-chhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCC-cchhhHHHHhhHHHHHHHHHh
Q 014698          199 SASLEEMGESLKDV-PWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLN-LTEAAWVSILPPLASVLVTSI  276 (420)
Q Consensus       199 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~  276 (420)
                            .+++.+.. .++++.++|.+|......+...........+.|.|+++.+|.+ ..+.+.......+..+++.++
T Consensus       189 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (352)
T PF07690_consen  189 ------SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLL  262 (352)
T ss_dssp             --------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------cccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                  00001111 2567777787775555666666677778899999988889999 789999999999999999999


Q ss_pred             hhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHH
Q 014698          277 AAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASI  356 (420)
Q Consensus       277 ~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~  356 (420)
                      .+++.||++++       +......................++..+.....++.|++.+...+.......+..|++++|+
T Consensus       263 ~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~  335 (352)
T PF07690_consen  263 AGRLSDRFGRR-------RRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGT  335 (352)
T ss_dssp             HHHHHHHTTCH-------HHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHH
T ss_pred             HHHHHHHcCcH-------HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence            99999999864       33332222222222222111112234455556677888888777777777888889999999


Q ss_pred             HHHHHHHhhhhhHHHHH
Q 014698          357 LLGITNTVGAVPGIVGV  373 (420)
Q Consensus       357 ~~g~~~~~~~~g~~~~~  373 (420)
                      +.|+.+...++++.++|
T Consensus       336 ~~g~~~~~~~~~~~igP  352 (352)
T PF07690_consen  336 AFGLFNSIGSLGGIIGP  352 (352)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCC
Confidence            99999999999999987

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>TIGR00897 2A0118 polyol permease family

Probab=99.98  E-value=1.3e-29  Score=233.37  Aligned_cols=349  Identities=12%  Similarity=0.085  Sum_probs=240.0

Q ss_pred             hhhhccccccch---hhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHH---HhhchHHHHHHHHHHHHhccc
Q 014698           30 KWVGLRIGRRGR---IYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLP---LLAGFMPGLVLSRVLVGIGEG  103 (420)
Q Consensus        30 ~~l~~~~g~~~~---l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~r~l~G~~~~  103 (420)
                      ++++.+..+.+.   .+.....+++++.+++.||++|||++..+..+.+++++++.   ...++++.+++.|+++|++.+
T Consensus        41 ~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~  120 (402)
T TIGR00897        41 KALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYP  120 (402)
T ss_pred             HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchH
Confidence            344444444443   34444555688888899999999999999999988876542   213578888999999999988


Q ss_pred             cchhhhHHHHHhcCCccccchhhHHHHhhhhhHH-HHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCC
Q 014698          104 VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGS-VAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNG  182 (420)
Q Consensus       104 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~  182 (420)
                      ...+...+.+.|++|+|+|++++|+.+.+.++|. +++|.+++.+.+.+||+..++.......+..+...++.+++++++
T Consensus       121 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (402)
T TIGR00897       121 LFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFTPQ  200 (402)
T ss_pred             HHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCCcc
Confidence            8888888889999999999999999999999997 689999999998889776665544333333333333322221111


Q ss_pred             CCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHH
Q 014698          183 ATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWV  262 (420)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  262 (420)
                      ++ ++++       +..    +     .+..+++++|+|+++...+..++.....+....+.|.|+++ +|+++.+.+..
T Consensus       201 ~~-~~~~-------~~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~  262 (402)
T TIGR00897       201 HM-QTRE-------KFS----E-----LGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQI  262 (402)
T ss_pred             cc-cCCc-------chh----h-----HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHH
Confidence            11 0000       000    0     01124578889999988888888888888888999999976 69999999998


Q ss_pred             HHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhH--HHHHHHhh-cCCCcHHHHHHHHHHHHHhhhhhh
Q 014698          263 SILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPA--VCMTLSSI-DLGLPHWEIVGILTAGLALSSFAL  339 (420)
Q Consensus       263 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~  339 (420)
                      .....++..++++..|+++||+++|       +............  ..+..... ..++.....+..++.|.+.+... 
T Consensus       263 ~~~~~~~~~ig~~~~g~l~dr~~~~-------~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~-  334 (402)
T TIGR00897       263 WGTFFFTNIVFNVIFGIVGDKLGWM-------NTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYV-  334 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcch-------hHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHH-
Confidence            8889999999999999999999865       2221111111111  11111111 11223333444566676666443 


Q ss_pred             hhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhh
Q 014698          340 SGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWL  406 (420)
Q Consensus       340 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (420)
                      +.... ..+.+|++||++.|+.+...++++.++|.+.|.+.|.. ++...+++.+++.++..++..+
T Consensus       335 ~~~~~-~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~-g~~~~~~~~a~~~~i~~~~~~~  399 (402)
T TIGR00897       335 PLAAV-FPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFF-GAIGVVWIFAALYVVSAFLTAF  399 (402)
T ss_pred             HHHHH-HHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHHHHHHHHH
Confidence            23333 34567789999999999999999999999999999987 5666777766666555555443

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.98  E-value=4.2e-30  Score=237.03  Aligned_cols=316  Identities=17%  Similarity=0.135  Sum_probs=232.6

Q ss_pred             HHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHH--------HHHHHHHHHHhccccchhhhHHHHHhcCCcc
Q 014698           49 LLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMP--------GLVLSRVLVGIGEGVSPSAATDLIARSIPLE  120 (420)
Q Consensus        49 ~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~  120 (420)
                      +++++.+++.||++|||++..+.++..++..++++ +++++        .+++.|+++|++.+...+...+++.|++|++
T Consensus        50 i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~  128 (394)
T TIGR00883        50 LGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGL-LPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPG  128 (394)
T ss_pred             hHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcc
Confidence            45778888899999999999999999999998876 77764        4889999999999999999999999999999


Q ss_pred             ccchhhHHHHhhhhhHHHHHHhhHHHhh--------hccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhh
Q 014698          121 ERSRAVSFVFGGLSFGSVAGLLLAPPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYI  192 (420)
Q Consensus       121 ~r~~~~~~~~~~~~~g~~~g~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (420)
                      +|++..+..+.+..+|.++++.++..+.        +.++||+.|.+.++..++........+|+++.++++++      
T Consensus       129 ~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  202 (394)
T TIGR00883       129 KRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEK------  202 (394)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhc------
Confidence            9999999999999999999998877654        35689999998877766655554555554432211100      


Q ss_pred             hhhhhhhhhhhhhcccccccchhhhhhcHH--HHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHH
Q 014698          193 NMKKSLSASLEEMGESLKDVPWKAIFRSKA--VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLAS  270 (420)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  270 (420)
                                    ++.++.+.++.+++++  ++......++.....+....+.|.|+++.+|.++.+.+.......+..
T Consensus       203 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  268 (394)
T TIGR00883       203 --------------HKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILF  268 (394)
T ss_pred             --------------cccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHH
Confidence                          0111223456666655  666666777777777788889999998888999999999999999999


Q ss_pred             HHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHH-HHHHhh-cCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhc
Q 014698          271 VLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVC-MTLSSI-DLGLPHWEIVGILTAGLALSSFALSGLYCTHQD  348 (420)
Q Consensus       271 ~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  348 (420)
                      .++.++.+++.||+++|        +............. ...... ..++.........+.+.+.+...+.......+.
T Consensus       269 ~~~~~~~g~l~dr~g~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  340 (394)
T TIGR00883       269 FITIPLSGALSDRIGRR--------PVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPEL  340 (394)
T ss_pred             HHHHHHHHHHHHHhchH--------HHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHh
Confidence            99999999999999964        22222222222222 111111 222233333444566666666666777777788


Q ss_pred             cCccchHHHHHHHH-HhhhhhHHHHHHHHHHHhccCCceeeeehhh
Q 014698          349 ISPEYASILLGITN-TVGAVPGIVGVALTGYLLDSTHSWSMSLFAP  393 (420)
Q Consensus       349 ~~~~~~g~~~g~~~-~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~  393 (420)
                      +|+++|+++.++.+ ....+|..++|.+.|.+.|+.+.+...++..
T Consensus       341 ~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~  386 (394)
T TIGR00883       341 FPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYL  386 (394)
T ss_pred             CCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHH
Confidence            89999999999854 4456788899999999999876565544443

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>PRK10504 putative transporter; Provisional

Probab=99.97  E-value=1.3e-29  Score=238.76  Aligned_cols=326  Identities=18%  Similarity=0.167  Sum_probs=238.2

Q ss_pred             HHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchh
Q 014698           46 DTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA  125 (420)
Q Consensus        46 ~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~  125 (420)
                      ...++.++.+++.|+++|||++..+..+.+++.+.+++ +++++.+++.|+++|++.+...|...+++.|++|+++|+++
T Consensus        57 ~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (471)
T PRK10504         57 TVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCAL-SGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAA  135 (471)
T ss_pred             HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHH
Confidence            34456777888899999999999999999998888775 89999999999999999999999999999999999999999


Q ss_pred             hHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhh-hcccCcccCCCCcCccchh-------------
Q 014698          126 VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFK-ILQEGETSNGATLAPRSNY-------------  191 (420)
Q Consensus       126 ~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------------  191 (420)
                      .++.....++|..+||.+++.+.+..|||+.|++..+...+..+... ..|+++....  +.|....             
T Consensus       136 ~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~~~~~~~  213 (471)
T PRK10504        136 MTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTR--RFDLSGFLLLAVGMATLTLA  213 (471)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCC--CCChHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999998877666543333 3343322111  1111100             


Q ss_pred             --hhhhhhhhh-----------------hhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhh
Q 014698          192 --INMKKSLSA-----------------SLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEEL  252 (420)
Q Consensus       192 --~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (420)
                        ..+...+..                 ..+|.+...+..+. +++|||+++......++..........+.|.|+++..
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  292 (471)
T PRK10504        214 LDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGL  292 (471)
T ss_pred             HhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCH-HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence              000000000                 00122222222333 5889999998888888877777777778999999878


Q ss_pred             CCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHH-HHHHHHHHH
Q 014698          253 SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHW-EIVGILTAG  331 (420)
Q Consensus       253 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g  331 (420)
                      |.++.+.++......++.+++.++.+++.||+++|        +...............+.........+ .....++.|
T Consensus       293 g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  364 (471)
T PRK10504        293 GFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR--------RVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQG  364 (471)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch--------HHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHH
Confidence            99999999999888888888889999999999864        232222222222222222222222222 233345556


Q ss_pred             HHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698          332 LALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST  383 (420)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~  383 (420)
                      ++.+...........+..|+++++++.|+.++...+|..+|+.+.|.+.+..
T Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~  416 (471)
T PRK10504        365 MVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLF  416 (471)
T ss_pred             HHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            6666566666666677889999999999999999999999999999998875

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=99.97  E-value=2e-29  Score=232.96  Aligned_cols=312  Identities=17%  Similarity=0.138  Sum_probs=231.5

Q ss_pred             hHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccch
Q 014698           45 KDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR  124 (420)
Q Consensus        45 ~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~  124 (420)
                      ....++.++.+++.||++|||++..+.....++.....+ +++++.+++.|+++|++.+...+...+++.|++|+++|.+
T Consensus        59 ~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~  137 (406)
T PRK15402         59 AGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILL-AQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIK  137 (406)
T ss_pred             HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHH
Confidence            344445677888899999999999999999999888876 8999999999999999999888889999999999999999


Q ss_pred             hhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHH-hhhcccCcccCCCCcCccchhhhhhhhhhhhhh
Q 014698          125 AVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG-FKILQEGETSNGATLAPRSNYINMKKSLSASLE  203 (420)
Q Consensus       125 ~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (420)
                      .+++......+|..++|.+++.+.+..+||+.|++.++..++..+. ....||++++++++. +          ..    
T Consensus       138 ~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------~~----  202 (406)
T PRK15402        138 ITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKL-S----------LK----  202 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCccccccc-c----------HH----
Confidence            9999998889999999999999999889999999988887765443 344555432211100 0          00    


Q ss_pred             hhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhh
Q 014698          204 EMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN  283 (420)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr  283 (420)
                      +     ...++++++++|+++...+..++..........+.|.++++.+|.++.+.+.......++.+++.++.+++.||
T Consensus       203 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r  277 (406)
T PRK15402        203 E-----LGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSR  277 (406)
T ss_pred             H-----HHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            0     01124578889998888777776666666667788999888889999999988887888889999999999999


Q ss_pred             hhhcCcchHHHHHHHHHHHHHHhHHHHHHHh----hcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHH
Q 014698          284 LIATGVETTMVRKICQTIAFLSPAVCMTLSS----IDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLG  359 (420)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g  359 (420)
                      +++|        +.. ..+............    ....+..+.....++.+.+.+...+...... ...+++++|++.+
T Consensus       278 ~~~~--------~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~-~~~~~~~~g~~~~  347 (406)
T PRK15402        278 RPLR--------SLI-RMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLT-LFSSDVSKGTVSA  347 (406)
T ss_pred             cCHH--------HHH-HHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHH-hhhccccccHHHH
Confidence            9864        222 222222222222211    1122233444555667777665444443333 3345689999999


Q ss_pred             HHHHhhhhhHHHHHHHHHHHhccCCcee
Q 014698          360 ITNTVGAVPGIVGVALTGYLLDSTHSWS  387 (420)
Q Consensus       360 ~~~~~~~~g~~~~~~~~g~l~~~~~~~~  387 (420)
                      ..+..+.++..+|+.+.+.+.+..+.+.
T Consensus       348 ~~~~~~~~~~~~g~~~~~~l~~~~~~~~  375 (406)
T PRK15402        348 AMGMLSMLIFTVGIELSKHAYLGGGNGL  375 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCchHH
Confidence            9999999999999999999998865444

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=99.97  E-value=2.4e-29  Score=232.02  Aligned_cols=325  Identities=16%  Similarity=0.124  Sum_probs=224.8

Q ss_pred             hhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh--h-----chHHHHHHHHHHHHhccccchhhhHHHHH
Q 014698           42 IYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL--A-----GFMPGLVLSRVLVGIGEGVSPSAATDLIA  114 (420)
Q Consensus        42 l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~--~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~  114 (420)
                      .......+.+.+.+.+.||+||||++..+.++..+++..+...  .     .+++.+++.|+++|++.+...+...+++.
T Consensus        59 ~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~  138 (399)
T PRK05122         59 LQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGI  138 (399)
T ss_pred             HHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHH
Confidence            3333444557778888999999999999999888776655431  1     25678999999999999999999999999


Q ss_pred             hcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhh
Q 014698          115 RSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINM  194 (420)
Q Consensus       115 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (420)
                      |++|+|+|++++++...+..+|.++|+.+++.+.+.+|||..+++.++..++..+.....|++++   ++ .++      
T Consensus       139 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~------  208 (399)
T PRK05122        139 GRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLARPRPAVPP---VK-GER------  208 (399)
T ss_pred             hhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCCCC---CC-ccc------
Confidence            99999999999999999999999999999999999999999988876665543333222222111   00 000      


Q ss_pred             hhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHH
Q 014698          195 KKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVT  274 (420)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  274 (420)
                       .                ++++.+|  +.+.......+....+.....+.|.|+++. |.  .+.+.......++.++++
T Consensus       209 -~----------------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~  266 (399)
T PRK05122        209 -L----------------PFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAAR-GW--DGAALALTLFGVAFVGAR  266 (399)
T ss_pred             -h----------------hHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cc--ccchHHHHHHHHHHHHHH
Confidence             0                0112222  122222223333445556667888888764 55  345666677888889999


Q ss_pred             HhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccch
Q 014698          275 SIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYA  354 (420)
Q Consensus       275 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  354 (420)
                      ++.+++.||+++|        +.. ..+.............. ++.....+..++.|++.+...+.......+..|+++|
T Consensus       267 ~~~g~l~~r~~~~--------~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~  336 (399)
T PRK05122        267 LLFGNLINRLGGL--------RVA-IVSLLVEILGLLLLWLA-PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNR  336 (399)
T ss_pred             HHHHHHHHHhccH--------HHH-HHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHH
Confidence            9999999999863        222 23323333333332222 2233444455667777765555555556677899999


Q ss_pred             HHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698          355 SILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFA  409 (420)
Q Consensus       355 g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (420)
                      |++.|+.+...++|..++|.+.|.+.|.. +++..+.+.+++.+++.+......+
T Consensus       337 g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~  390 (399)
T PRK05122        337 GAALGAYSVFLDLSLGITGPLAGLVASWF-GYPSIFLAAALAALLGLALTWLLYR  390 (399)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999986 6888888877766665555544433

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=99.97  E-value=6.1e-29  Score=229.12  Aligned_cols=338  Identities=13%  Similarity=0.139  Sum_probs=237.3

Q ss_pred             hhhhhccccccchhhhh---HHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccc
Q 014698           29 KKWVGLRIGRRGRIYLK---DTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS  105 (420)
Q Consensus        29 ~~~l~~~~g~~~~l~~~---~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~  105 (420)
                      ..+++.+.+..+...+.   ...++++..+++.||++|||++..+..++.+++++++. +++++.++++|+++|++.+..
T Consensus        43 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~-a~~~~~l~~~r~l~Gi~~~~~  121 (413)
T PRK15403         43 VRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLF-TTSMTQFLIARFIQGTSICFI  121 (413)
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHH
Confidence            34555555554444443   34446788889999999999999999999999998886 899999999999999998877


Q ss_pred             hhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHH-hhhcccCcccCCCC
Q 014698          106 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG-FKILQEGETSNGAT  184 (420)
Q Consensus       106 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~  184 (420)
                      .+....++.|++|+++|++++++......+|..+||.+++.+.+..|||+.|++.++..++..+. .+.+||++++++++
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~  201 (413)
T PRK15403        122 ATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAVP  201 (413)
T ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCC
Confidence            77778889999999999999999999999999999999999999899999999998887775443 45567754321110


Q ss_pred             cCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHH
Q 014698          185 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI  264 (420)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  264 (420)
                       .+.          .+         ...++++++|||.++...+..++.....+.+..+.|.++++.+|+++.+.++...
T Consensus       202 -~~~----------~~---------~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~  261 (413)
T PRK15403        202 -FSA----------KS---------VLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQV  261 (413)
T ss_pred             -CCh----------HH---------HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHH
Confidence             000          00         0112568889999999888888878888888888999999988999999999887


Q ss_pred             hhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh--hcCCCcHHHHHHHHHHHHHhhhhhhhhh
Q 014698          265 LPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS--IDLGLPHWEIVGILTAGLALSSFALSGL  342 (420)
Q Consensus       265 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~  342 (420)
                      ....+..++..+.+++.+|..++       |...................  ...+..........+.+.+.+...+...
T Consensus       262 ~~~~~~~i~~~l~~~~~~~~~~~-------~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~  334 (413)
T PRK15403        262 PVFGAVIVANAIVARFVKDPTEP-------RFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLF  334 (413)
T ss_pred             HHHHHHHHHHHHHHHHhccCCch-------hHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHH
Confidence            77788888777777765443322       11111111111111111111  1122222234455556666665554444


Q ss_pred             hhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHH
Q 014698          343 YCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFF  397 (420)
Q Consensus       343 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~  397 (420)
                      .... .-.+..+|++.++.+.....+...++...+++.+.  +...++...+.+.
T Consensus       335 ~~al-~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~  386 (413)
T PRK15403        335 RFTL-FSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN--GGRLPFHLLAVVA  386 (413)
T ss_pred             HHHh-ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCchHHHHHHHHH
Confidence            3222 22233479999999999999999999999998877  3444555544433

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.97  E-value=2.1e-29  Score=230.83  Aligned_cols=342  Identities=12%  Similarity=0.006  Sum_probs=236.9

Q ss_pred             cccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhc
Q 014698           37 GRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS  116 (420)
Q Consensus        37 g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~  116 (420)
                      +.....+.....+...+.|++.||++|||+++.+..+++++++.+.+ +++.   ++.|+++|++.+...|...+++.|+
T Consensus        41 ~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~-~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~  116 (393)
T PRK11195         41 PLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLF-GIHP---LLAYGLVGIGAAAYSPAKYGILTEL  116 (393)
T ss_pred             HHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33334444555566788888899999999999999999998887765 5553   7899999999999999999999999


Q ss_pred             CCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhh
Q 014698          117 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKK  196 (420)
Q Consensus       117 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (420)
                      +|+|+|++++++.+...++|.++||.+++.+.+. .|+..+.+.+...++..+....+||+++++++++.+...      
T Consensus       117 ~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------  189 (393)
T PRK11195        117 LPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLAALFNLFIPRLGARRPGQSWNPIA------  189 (393)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCCCHHH------
Confidence            9999999999999999999999999999999886 488888777665555555556677755332211111000      


Q ss_pred             hhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHh
Q 014698          197 SLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSI  276 (420)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  276 (420)
                          ..++.     +...+.++++|.+........+............|.|+++.+|.++.+.|......+++.+++++.
T Consensus       190 ----~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~  260 (393)
T PRK11195        190 ----LLRDF-----FHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGA  260 (393)
T ss_pred             ----HHHHH-----HHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHH
Confidence                00000     011346777887766555555555555666677788888889999999999999999999999999


Q ss_pred             hhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccc-hH
Q 014698          277 AAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEY-AS  355 (420)
Q Consensus       277 ~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~g  355 (420)
                      .+++.||.+++       + .. ..+...... ....... ++.+......++.|++.+....+.....++..|++. +|
T Consensus       261 ~~~l~~~~~~~-------~-~~-~~g~~~~~~-~~~~~~~-~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g  329 (393)
T PRK11195        261 AARLVTLETVL-------R-VL-PAGILMGLV-VLLMALQ-HSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAG  329 (393)
T ss_pred             HHHHhcCCccc-------c-hH-HHHHHHHHH-HHHHHHH-hHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccch
Confidence            99999987653       2 22 222222222 2122222 223333444556777777666666666555434443 69


Q ss_pred             HHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698          356 ILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASS  411 (420)
Q Consensus       356 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (420)
                      ++.++.+..++++..++..+.+.+ +.. +.+..+.+.+...+.+..+.+.++.+.
T Consensus       330 ~~~a~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (393)
T PRK11195        330 HSIAVQNFNENLAMLLMLGLYSLL-VKL-GVPVVAVIVGFGLLVALAMALLWRWHR  383 (393)
T ss_pred             hHHHHHhHHHHHHHHHHHHHHHHH-HHc-CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999966 443 566666665554444444444444333

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.97  E-value=1.8e-28  Score=230.21  Aligned_cols=347  Identities=14%  Similarity=0.151  Sum_probs=240.3

Q ss_pred             hccccccchhhhhHHh-HHhhhhcchhhhc-----chhHH-HHHHHHHHHHHHHHHHHh--hchHHHHHHHHHHHHhccc
Q 014698           33 GLRIGRRGRIYLKDTN-LLELLRLPLLFVT-----WIRKV-LQTGVLIWSLATALLPLL--AGFMPGLVLSRVLVGIGEG  103 (420)
Q Consensus        33 ~~~~g~~~~l~~~~~~-~~~l~~~p~~~~~-----~~r~~-~~~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~  103 (420)
                      +.+.++.+.+...... ...++.+|+.||+     ||||. +..+.+...++...+++.  .++++.+.+.+++.|++.+
T Consensus        43 g~~~~~ig~~~~~~~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a  122 (491)
T PRK11010         43 NIDLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSA  122 (491)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHH
Confidence            4444445444222222 5789999999998     87774 667777777776666553  2468889999999999999


Q ss_pred             cchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhh-ccchhHHHHHHHHHHHHHHHHhhhcccCcccCC
Q 014698          104 VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-NLGWESVFYIFGLLGIAWFSGFKILQEGETSNG  182 (420)
Q Consensus       104 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~  182 (420)
                      ...+...+++.|++|+|||+++.++...+..+|.++++.++.++.+ ..|||..|++.++..++..+..++.||++++++
T Consensus       123 ~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~~  202 (491)
T PRK11010        123 SQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLLAPEPTDTIP  202 (491)
T ss_pred             HHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCccccc
Confidence            9999999999999999999999999999999999999999999998 579999999999887776555556666432211


Q ss_pred             CCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHH
Q 014698          183 ATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWV  262 (420)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  262 (420)
                      +   +++.    ++            ....++++++++++.+...+..++..........+.+.|+.+..|++..+.+..
T Consensus       203 ~---~~~~----~~------------~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~  263 (491)
T PRK11010        203 V---PKTL----EQ------------AVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLV  263 (491)
T ss_pred             c---ccch----hh------------hHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence            0   0000    00            001134567777777766666666666666667788888877789999999998


Q ss_pred             HH-hhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHH--HHHHHhhcCCCcHHHHHHHHHHHHHhhhhhh
Q 014698          263 SI-LPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAV--CMTLSSIDLGLPHWEIVGILTAGLALSSFAL  339 (420)
Q Consensus       263 ~~-~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  339 (420)
                      .. ...++.+++.++.|+++||+++|       | ............  .........++........++..+..+....
T Consensus       264 ~~~~g~i~~iiG~ll~G~L~dr~g~~-------~-~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~  335 (491)
T PRK11010        264 NKTLGLLATIVGALYGGILMQRLSLF-------R-ALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTA  335 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhHH-------H-HHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHH
Confidence            74 55578999999999999999964       2 222222221111  1111112212222222222332222332333


Q ss_pred             hhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhh
Q 014698          340 SGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLA  407 (420)
Q Consensus       340 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (420)
                      .......+..+++.+++..|+.+....+|..+++.+.|.+.|.. +|+..|.+.+++.+.+.+.....
T Consensus       336 ~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~-G~~~~f~~~~~~~l~~l~~~~~~  402 (491)
T PRK11010        336 AFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH-GWPTFYLFSVAAAVPGLLLLLVC  402 (491)
T ss_pred             HHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHH
Confidence            34445556678888999999999999999999999999999986 68877877777666665555444

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=99.97  E-value=1.1e-28  Score=226.70  Aligned_cols=337  Identities=15%  Similarity=0.060  Sum_probs=231.7

Q ss_pred             hhhhccccccchhhhhHH---hHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccch
Q 014698           30 KWVGLRIGRRGRIYLKDT---NLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSP  106 (420)
Q Consensus        30 ~~l~~~~g~~~~l~~~~~---~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~  106 (420)
                      .+++.+....+.+.....   .+..++.+++.||+++||++..+..+..++.+.+.. +++++.+++.|+++|++.+...
T Consensus        39 ~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~g~~~~~~~  117 (400)
T PRK11646         39 DQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAI-AHEPWLLWLSCILSGLGGTLFD  117 (400)
T ss_pred             HHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHH
Confidence            334444444444443322   223577888899999999999999999999998876 8899999999999999988888


Q ss_pred             hhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHH-HHhhhcccCcccCCCCc
Q 014698          107 SAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQEGETSNGATL  185 (420)
Q Consensus       107 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  185 (420)
                      |...+++.|++|+|+|++++++.....++|..+||.+++.+. .+|||+.|++.++..++.. +..+..||++++  ++ 
T Consensus       118 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~--~~-  193 (400)
T PRK11646        118 PPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLS--TV-  193 (400)
T ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCccccc--cc-
Confidence            999999999999999999999999999999999999999998 6799999999887766643 333444432110  00 


Q ss_pred             CccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHh
Q 014698          186 APRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSIL  265 (420)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  265 (420)
                       ++        +            .+.++++++++|+++...+..+...........+.|.|+++..+ ++.+.+.+.+.
T Consensus       194 -~~--------~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~l~~~  251 (400)
T PRK11646        194 -RT--------P------------VREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-SPSAVKWMYAI  251 (400)
T ss_pred             -ch--------h------------hHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-CchHHHHHHHH
Confidence             00        0            01124567788887766555544444444455688999988644 67788888777


Q ss_pred             hHHHHHHHHHhhhhhhhh-hhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhh
Q 014698          266 PPLASVLVTSIAAQFADN-LIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYC  344 (420)
Q Consensus       266 ~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  344 (420)
                      .++....+....+++.|| ++.        ++.. ..+.....+......... +.........+.+.+.+...+.....
T Consensus       252 ~~~~~~~~~~~~~~~~~~r~~~--------~~~~-~~~~~~~~~~~~~l~~~~-~~~~~~~~~~l~~~g~~~~~p~~~~~  321 (400)
T PRK11646        252 EACLSLTLLYPIARWSEKRFRL--------EHRL-MAGLLIMSLSMFPIGMVS-NLQQLFTLICLFYIGSIIAEPARETL  321 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHhcch--------hHHH-HHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHccHHHH
Confidence            777666655555666554 332        2222 233333333333332222 23333333455566666555666666


Q ss_pred             hhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCc---eeeeehhhhHHHHHHHHH
Q 014698          345 THQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHS---WSMSLFAPSIFFYLTGTI  403 (420)
Q Consensus       345 ~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~---~~~~~~~~~~~~~~~~~~  403 (420)
                      ..+..|++++|++.|+.+....+|..+||.+.|.+.|+.++   ....+...+...++..+.
T Consensus       322 ~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (400)
T PRK11646        322 SASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA  383 (400)
T ss_pred             HHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence            77778999999999999999999999999999999998643   344454444444444333

>TIGR00899 2A0120 sugar efflux transporter

Probab=99.97  E-value=2.5e-28  Score=223.68  Aligned_cols=338  Identities=16%  Similarity=0.060  Sum_probs=230.4

Q ss_pred             hhhhccccccchhhhhHHh---HHhhhhcchhhhcchhHHHHH-HHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccc
Q 014698           30 KWVGLRIGRRGRIYLKDTN---LLELLRLPLLFVTWIRKVLQT-GVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS  105 (420)
Q Consensus        30 ~~l~~~~g~~~~l~~~~~~---~~~l~~~p~~~~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~  105 (420)
                      ++++.+..+.+.+......   +.+.+.+.+.||++|||.++. +.....++..++++ +++++.+++.|++.|.+.+..
T Consensus        26 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~g~~~~~~  104 (375)
T TIGR00899        26 EEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW-NRNYFLLLVLGVLLSSFASTA  104 (375)
T ss_pred             cccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHhhhhhh
Confidence            3444444455555444333   345666667999998887654 55555666666665 899999999999999888888


Q ss_pred             hhhhHHHHHhcCCccccchh--hHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHH-hhhcccCcccCC
Q 014698          106 PSAATDLIARSIPLEERSRA--VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG-FKILQEGETSNG  182 (420)
Q Consensus       106 ~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~-~~~~~~~~~~~~  182 (420)
                      .|...+++.|+.|+++|++.  .+....+.++|.++||.+++.+.+.+|||+.|++.++..++..+. .+++||++++++
T Consensus       105 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (375)
T TIGR00899       105 NPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAP  184 (375)
T ss_pred             HHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCcc
Confidence            88888999999887777654  578888899999999999999999999999999998877665444 445676543221


Q ss_pred             CCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHH
Q 014698          183 ATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWV  262 (420)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  262 (420)
                      +++ +                       ..+.++.+++|+++......++..........+.|.|+++.+|.++.+.+..
T Consensus       185 ~~~-~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~  240 (375)
T TIGR00899       185 GAL-T-----------------------RLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLM  240 (375)
T ss_pred             ccc-C-----------------------cchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHH
Confidence            110 0                       0012235566766665555555555555566788999988889999999988


Q ss_pred             HHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhh
Q 014698          263 SILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGL  342 (420)
Q Consensus       263 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  342 (420)
                      ........+++.++.+++.||+++|       + .. ................. ++.........+.+++.+...+...
T Consensus       241 ~~~~~~~~~~~~~~~g~l~~r~g~~-------~-~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~  310 (375)
T TIGR00899       241 MGTAAGLEIPFMLLAGYLIKRFGKR-------R-LM-LLAALAGVAFYTGLAAD-NSLWALLMLQLLNAIFIGILAGIGM  310 (375)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHhcch-------h-HH-HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8777777888889999999999865       2 22 22222222222222222 1223333334455666664444444


Q ss_pred             hhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHH
Q 014698          343 YCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIV  404 (420)
Q Consensus       343 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~  404 (420)
                      .... +..|++++++.++.+...++|..++|.+.|.+.|.. +++..+.+.+++.+++.+..
T Consensus       311 ~~~~-~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~-g~~~~~~~~~~~~~~~~~~~  370 (375)
T TIGR00899       311 LYFQ-DLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERW-SYHAVYWFAIVMLIVALFCL  370 (375)
T ss_pred             HHHH-HhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHHH
Confidence            4444 444566789999999999999999999999999986 68878877766555554443

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>PRK11043 putative transporter; Provisional

Probab=99.97  E-value=2.7e-28  Score=225.15  Aligned_cols=309  Identities=12%  Similarity=0.133  Sum_probs=227.8

Q ss_pred             chhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCc
Q 014698           40 GRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL  119 (420)
Q Consensus        40 ~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~  119 (420)
                      ..+......++.++.+++.||++||+++..+..+..++.+...+ +++++.+++.|+++|++.+...+...+++.|++|+
T Consensus        47 ~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~  125 (401)
T PRK11043         47 LSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLW-VESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPA  125 (401)
T ss_pred             HHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc
Confidence            33444455567899999999999999999999999999888876 89999999999999999888888888999999999


Q ss_pred             cccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhh
Q 014698          120 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLS  199 (420)
Q Consensus       120 ~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (420)
                      +++++..+.......+|..++|.+++++.+.+|||+.|++.++..++..+..++++|++++++++    +          
T Consensus       126 ~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----------  191 (401)
T PRK11043        126 QKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSKKARKQS----Q----------  191 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCCccccc----h----------
Confidence            99999999999999999999999999999999999999998888777665556666554321100    0          


Q ss_pred             hhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhh
Q 014698          200 ASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQ  279 (420)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~  279 (420)
                                ++.++++++|+|+++...+...+....++....+.|.++++ +|+++.+.++......++.+++.+..++
T Consensus       192 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~  260 (401)
T PRK11043        192 ----------DALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRA  260 (401)
T ss_pred             ----------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                      01124577888888766655555566666777888998876 6999999998888888888899999999


Q ss_pred             hhhhhhhcCcchHHHHHHH-HHHHHHHhHHHHHHHhh-cCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHH
Q 014698          280 FADNLIATGVETTMVRKIC-QTIAFLSPAVCMTLSSI-DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASIL  357 (420)
Q Consensus       280 l~dr~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~  357 (420)
                      +.||++++       +... ................. ..++.........+.+.+.+...+.......+.. |+++|++
T Consensus       261 l~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~  332 (401)
T PRK11043        261 ALQKWGGE-------QLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPF-PQATGKA  332 (401)
T ss_pred             HHHHcCHH-------HHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-cccChHH
Confidence            99999864       2111 11111111111111111 1222222333345556666655555544444444 5689999


Q ss_pred             HHHHHHhhhhhHHHHHHHHHHHhcc
Q 014698          358 LGITNTVGAVPGIVGVALTGYLLDS  382 (420)
Q Consensus       358 ~g~~~~~~~~g~~~~~~~~g~l~~~  382 (420)
                      .|+.+.....++..++.+.|.+.|.
T Consensus       333 ~g~~~~~~~~~~~~~~~~~g~l~~~  357 (401)
T PRK11043        333 AALQNTLQLGLCFLASLLVSALIST  357 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccCC
Confidence            9999999999999999999999875

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=99.97  E-value=4.1e-28  Score=223.04  Aligned_cols=323  Identities=18%  Similarity=0.177  Sum_probs=232.2

Q ss_pred             hhhhhccccccc---hhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccc
Q 014698           29 KKWVGLRIGRRG---RIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS  105 (420)
Q Consensus        29 ~~~l~~~~g~~~---~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~  105 (420)
                      .++++.+....+   ..+.....++.++.+++.||++|||++..+..+..++.+...+ +++++.+++.|++.|++.+..
T Consensus        32 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~  110 (385)
T TIGR00710        32 AADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLAL-SNNIETLLVLRFVQAFGASAG  110 (385)
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHcchhHH
Confidence            344544443333   3334445566888888999999999999999999999988876 899999999999999999999


Q ss_pred             hhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHH-hhhcccCcccCCCC
Q 014698          106 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG-FKILQEGETSNGAT  184 (420)
Q Consensus       106 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~  184 (420)
                      .+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+||+.|++.++..++..+. .+..||++++++++
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (385)
T TIGR00710       111 SVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYEARI  190 (385)
T ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccC
Confidence            99999999999999999999999999999999999999999999899999999988877665443 34455543322110


Q ss_pred             cCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHH
Q 014698          185 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI  264 (420)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  264 (420)
                         +.      +   +         ...++++.+|+|+++...+...+.....+....+.|.++++.+|.++.+.+.+..
T Consensus       191 ---~~------~---~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~  249 (385)
T TIGR00710       191 ---QI------S---T---------YFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFA  249 (385)
T ss_pred             ---CH------H---H---------HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHH
Confidence               00      0   0         0112456778888888877777777777778888999998888999999999999


Q ss_pred             hhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHH-hhcCCCcH-HHHHHHHHHHHHhhhhhhhhh
Q 014698          265 LPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS-SIDLGLPH-WEIVGILTAGLALSSFALSGL  342 (420)
Q Consensus       265 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~  342 (420)
                      ...++.+++.++.+++.||+++|       +.................. ........ .......+.|.+.+...+...
T Consensus       250 ~~~~~~~~~~~~~g~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  322 (385)
T TIGR00710       250 LNIIAMIFGGFLNGRFIKKWGAK-------SLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAM  322 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCHH-------HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999864       2222211111111111111 11111122 223334555666665555555


Q ss_pred             hhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc
Q 014698          343 YCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD  381 (420)
Q Consensus       343 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~  381 (420)
                      ....++. |++++++.++.+.....++.+.+.+.+.+.+
T Consensus       323 ~~~~~~~-~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~  360 (385)
T TIGR00710       323 AYALEDF-PHVAGTASALFGTLRLVLGAIVGYLVSLIHG  360 (385)
T ss_pred             HHHhccC-cccchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            5444544 5789999999999888766676767774433

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>PRK03893 putative sialic acid transporter; Provisional

Probab=99.97  E-value=5e-29  Score=236.62  Aligned_cols=342  Identities=16%  Similarity=0.109  Sum_probs=220.4

Q ss_pred             hhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCcccc
Q 014698           43 YLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER  122 (420)
Q Consensus        43 ~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r  122 (420)
                      ......++.++.+++.||+||||++..+.++.+++.++.++ +++++.+++.|++.|++.+...+....++.|++|+++|
T Consensus        64 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r  142 (496)
T PRK03893         64 AFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGF-APGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLR  142 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence            33444456778888899999999999999999999998886 89999999999999999999999999999999999999


Q ss_pred             chhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhhhh
Q 014698          123 SRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASL  202 (420)
Q Consensus       123 ~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (420)
                      ++++++...+.++|..++|.+++.+.+.++||+.|++..+..++.......+||+++.+++++.+.+.....+.......
T Consensus       143 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (496)
T PRK03893        143 NKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEH  222 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchh
Confidence            99999999999999999999999999999999999876554444444444556554322111111000000000000000


Q ss_pred             hhh---------------cccccccchh-------------------hhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHh
Q 014698          203 EEM---------------GESLKDVPWK-------------------AIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYF  248 (420)
Q Consensus       203 ~~~---------------~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (420)
                      +..               ........+.                   +..+.+.........+......+....++|.|+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l  302 (496)
T PRK03893        223 RIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYL  302 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence            000               0000000000                   000001111111111111111223456899999


Q ss_pred             hhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHH-HHH
Q 014698          249 SEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEI-VGI  327 (420)
Q Consensus       249 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  327 (420)
                      ++.+|++..+.+.+.+...++.+++.++.|++.||+++|        +... .+.....+.........+...+.. ...
T Consensus       303 ~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  373 (496)
T PRK03893        303 KTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTR--------KAYV-CSLLISQLLIIPVFAIGGANVWVLGLLL  373 (496)
T ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch--------HHHH-HHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence            877899999999999999999999999999999999864        2222 222222222222222222222222 222


Q ss_pred             HHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhH
Q 014698          328 LTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSI  395 (420)
Q Consensus       328 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~  395 (420)
                      +..+...............+..|+++|++++|+.+....+|+.++|.+.|.+.|.. ++...+...+.
T Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~-g~~~~~~~~~~  440 (496)
T PRK03893        374 FFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRL-DLGTALASLSF  440 (496)
T ss_pred             HHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccC-ChHHHHHHHHH
Confidence            22222222223333445566788899999999999999999999999999999987 56655544443

>PRK12382 putative transporter; Provisional

Probab=99.97  E-value=2.8e-28  Score=224.36  Aligned_cols=334  Identities=14%  Similarity=0.053  Sum_probs=224.8

Q ss_pred             hhhhccccccchhhhhHHh---HHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHH---H----hhchHHHHHHHHHHHH
Q 014698           30 KWVGLRIGRRGRIYLKDTN---LLELLRLPLLFVTWIRKVLQTGVLIWSLATALLP---L----LAGFMPGLVLSRVLVG   99 (420)
Q Consensus        30 ~~l~~~~g~~~~l~~~~~~---~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~---~----~~~~~~~l~~~r~l~G   99 (420)
                      ++++.+..+.+.+.+.+..   +.+.+.+++.||++|||++..+.+...++.+...   .    ..++++.+++.|+++|
T Consensus        44 ~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G  123 (392)
T PRK12382         44 HDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILG  123 (392)
T ss_pred             HhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHH
Confidence            4455555555555444443   3466778889999999999999887776554321   1    1357889999999999


Q ss_pred             hccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcc
Q 014698          100 IGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGET  179 (420)
Q Consensus       100 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~  179 (420)
                      ++.+...+...+++.|++|+|+|++++++.+.+.+.|..+||++++.+.+.+|||..+.+..+..++........||+++
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (392)
T PRK12382        124 FGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAFNGTVRKVPA  203 (392)
T ss_pred             HHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence            99998888889999999999999999999999999999999999999999899998877655544333222222222211


Q ss_pred             cCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchh
Q 014698          180 SNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEA  259 (420)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  259 (420)
                      ++     +++      .                +.++.+|  .++...+...+..........+.|.|+++. +.+  +.
T Consensus       204 ~~-----~~~------~----------------~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~--~~  251 (392)
T PRK12382        204 HA-----GER------P----------------SLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFASK-GWA--MA  251 (392)
T ss_pred             Cc-----ccC------c----------------hHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHhc-CCc--hh
Confidence            10     000      0                0111111  111111122233344555667888888764 654  35


Q ss_pred             hHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhh
Q 014698          260 AWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFAL  339 (420)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  339 (420)
                      +.......++.++++++.|++.||+++|+       ...  .+.....+......... +........++.+.+.+...+
T Consensus       252 ~~~~~~~~~~~~~~~~~~g~l~~r~g~~~-------~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~  321 (392)
T PRK12382        252 GFTLTAFGGAFVLMRVLFGWMPDRFGGVK-------VAI--VSLLVETVGLLLLWLAP-TAWVALAGAALTGAGCSLIFP  321 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCe-------ehH--HHHHHHHHHHHHHHHcc-cHHHHHHHHHHHHHHHHhHHH
Confidence            56666777788899999999999999752       222  22222222332322222 233444455666777665555


Q ss_pred             hhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhh
Q 014698          340 SGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWL  406 (420)
Q Consensus       340 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (420)
                      .......+..|+++||++.|+.+...++|..++|.+.|.+.|+. +++..|.+.+++.+++....+.
T Consensus       322 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~  387 (392)
T PRK12382        322 ALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF-GYPSVFLAGAISAVLGIIVTIL  387 (392)
T ss_pred             HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHh
Confidence            55556667789999999999999999999999999999999986 6888888877766655555443

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.97  E-value=5.4e-28  Score=221.29  Aligned_cols=316  Identities=12%  Similarity=0.040  Sum_probs=220.8

Q ss_pred             hhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccc
Q 014698           42 IYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE  121 (420)
Q Consensus        42 l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~  121 (420)
                      .+.....+++++.+++.||++|||++..+.++.+++...++. ++|++.+++.|+++|++.+...+...+.+.|..++++
T Consensus        49 ~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~  127 (381)
T PRK03633         49 SYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGL-MVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN  127 (381)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence            333344556778888899999999999999999999988876 8999999999999999999888888888889999999


Q ss_pred             cchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhhh
Q 014698          122 RSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSAS  201 (420)
Q Consensus       122 r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (420)
                      |+++++....+.++|..+||.+++.+.+...|+..+. .+......... .+.+.++++++++                 
T Consensus       128 ~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~-----------------  188 (381)
T PRK03633        128 RGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV-TGLVLAAILPL-LFTRILNQQAENH-----------------  188 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHH-HHHHHHHHHHH-HHhcccCCCCCCC-----------------
Confidence            9999999999999999999999999877643333332 22222211111 1212111110000                 


Q ss_pred             hhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhh
Q 014698          202 LEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFA  281 (420)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~  281 (420)
                              +..+.++.+|+|.++......+.....+.....++|.|+++. |.++.+.+...+...++.+++++..+++.
T Consensus       189 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~-g~s~~~~g~~~~~~~~~~~~~~~~~g~l~  259 (381)
T PRK03633        189 --------DSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQ-GMSDASIGFWMALLVSAGILGQWPIGRLA  259 (381)
T ss_pred             --------CCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence                    001234567777777654444444445556667899999874 99999999998999999999999999999


Q ss_pred             hhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHH
Q 014698          282 DNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGIT  361 (420)
Q Consensus       282 dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~  361 (420)
                      ||+++|        + ....+.....+...... .   .........+.+.+.....+.......+..|+++++...+..
T Consensus       260 dr~~~~--------~-~l~~~~~~~~~~~~~~~-~---~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  326 (381)
T PRK03633        260 DRFGRL--------L-VLRVQVFVVILGSIAML-S---QAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQAL  326 (381)
T ss_pred             HHcCcH--------H-HHHHHHHHHHHHHHHHh-h---hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHH
Confidence            999864        2 22222222222222221 1   112223334455554445555555566777888888888888


Q ss_pred             HHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHH
Q 014698          362 NTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLT  400 (420)
Q Consensus       362 ~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~  400 (420)
                      +...++|+.++|.+.|.+.|+. ++...|.+.+.+.++.
T Consensus       327 ~~~~~lG~~igp~~~G~l~~~~-g~~~~f~~~~~~~l~~  364 (381)
T PRK03633        327 LLSYTVGSLLGPSFTAMLMQNY-SDNLLFIMIASVSFIY  364 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh-CccHHHHHHHHHHHHH
Confidence            8889999999999999999986 5777777765554433

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=99.97  E-value=4.1e-28  Score=224.78  Aligned_cols=329  Identities=13%  Similarity=0.103  Sum_probs=231.9

Q ss_pred             HHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchh
Q 014698           46 DTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA  125 (420)
Q Consensus        46 ~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~  125 (420)
                      ...++..+.+++.||++||+++..+.....++..+... +++++.+++.|++.|++.+ ..+....++.|++|+++|+++
T Consensus        66 ~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~  143 (408)
T PRK09874         66 FSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGL-AQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWA  143 (408)
T ss_pred             HHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHH
Confidence            33445677788899999999999999999998888775 8899999999999999854 567778899999999999999


Q ss_pred             hHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHH-hhhcccCcccCCCCcCccchhhhhhhhhhhhhhh
Q 014698          126 VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG-FKILQEGETSNGATLAPRSNYINMKKSLSASLEE  204 (420)
Q Consensus       126 ~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (420)
                      +++...+..+|..++|.+++.+.+..+||+.|++.++..++..+. ..+.+|++++.++++ +        .+    .+ 
T Consensus       144 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~----~~-  209 (408)
T PRK09874        144 LGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKE-M--------LH----MR-  209 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchh-h--------hH----HH-
Confidence            999999999999999999999999899999999988877665443 344454432211110 0        00    00 


Q ss_pred             hcccccccchhhhhhcHHHHHH-HHHHHHhHHHHHHHhhhhhhHhhhhhCCCcc---hhhHHHHhhHHHHHHHHHhhhhh
Q 014698          205 MGESLKDVPWKAIFRSKAVWAM-IYAHFCGSWGHYTCLSWLPTYFSEELSLNLT---EAAWVSILPPLASVLVTSIAAQF  280 (420)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~g~l  280 (420)
                              +..+.+++|+++.. ................+.|.|.++..+....   ..+.+....+++.+++.+..|++
T Consensus       210 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l  281 (408)
T PRK09874        210 --------EVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKL  281 (408)
T ss_pred             --------HHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                    01234456665443 2233333444445566788888775332221   23555566777888889999999


Q ss_pred             hhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHH
Q 014698          281 ADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGI  360 (420)
Q Consensus       281 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~  360 (420)
                      .||+++|       +..  ..+.....+........ ++.....+..++.|++.+...+.......+..|++++|+..++
T Consensus       282 ~dr~g~~-------~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  351 (408)
T PRK09874        282 GDRIGPE-------KIL--ITALIFSVLLLIPMSFV-QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSY  351 (408)
T ss_pred             Hhccccc-------hhH--HHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehH
Confidence            9999865       222  22222223322222222 2234444455667877776666666666677888999999999


Q ss_pred             HHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698          361 TNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFA  409 (420)
Q Consensus       361 ~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (420)
                      .+....+|..++|.+.|.+.|.. +++..|.+.+++.+++.+..+...+
T Consensus       352 ~~~~~~~g~~~gp~~~G~l~~~~-g~~~~f~~~~~~~l~~~~~~~~~~~  399 (408)
T PRK09874        352 NQSFRDIGNVTGPLMGAAISANY-GFRAVFLVTAGVVLFNAVYSWNSLR  399 (408)
T ss_pred             HHHHHHHHHHhhHHHHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999986 7888888887777666665554443

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.97  E-value=1e-27  Score=220.68  Aligned_cols=300  Identities=15%  Similarity=0.128  Sum_probs=206.1

Q ss_pred             HHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchh
Q 014698           46 DTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA  125 (420)
Q Consensus        46 ~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~  125 (420)
                      ...++.++.+.+.||++|||++..+..+..++...... +++++.+++.|+++|++.+...+...+++.|++|+++|+++
T Consensus        50 ~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~  128 (392)
T PRK10473         50 GMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSL-AETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKV  128 (392)
T ss_pred             HHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHH
Confidence            44455777888899999999999999999999988875 88999999999999999999899999999999999999999


Q ss_pred             hHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHH-HHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhh
Q 014698          126 VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQEGETSNGATLAPRSNYINMKKSLSASLEE  204 (420)
Q Consensus       126 ~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (420)
                      +++.+....+|..++|.+++.+.+..+||+.|++.++..++.. +....+||++++++++  +..               
T Consensus       129 ~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~---------------  191 (392)
T PRK10473        129 LSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPARAPA--ASS---------------  191 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCC--ccc---------------
Confidence            9999999999999999999998888899999999888776644 3445566654322111  000               


Q ss_pred             hcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhh
Q 014698          205 MGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL  284 (420)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~  284 (420)
                           .....++.+|+|+++...+...+..........+.|.++++.+|+++.+.+......+++.+++.++.+++.||+
T Consensus       192 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~  266 (392)
T PRK10473        192 -----KPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF  266 (392)
T ss_pred             -----hHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence                 000123566788777665555554455555666778888888899999999999999999999999999999999


Q ss_pred             hhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHh
Q 014698          285 IATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTV  364 (420)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~  364 (420)
                      ++|        +. ...+................ .........+.+.+.+.......  ..+..|.++++   |..+..
T Consensus       267 g~~--------~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~~~~~~~~--~~~~~~~~~~~---g~~~~~  331 (392)
T PRK10473        267 KPR--------TL-MLTSQVLFLAAGITLALSPS-HAVSLFGITLICAGFSVGFGVAM--SQALGPFSLRA---GVASST  331 (392)
T ss_pred             CHH--------HH-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhHHHH--HHHhccCcccc---cHHHHH
Confidence            864        22 22332222222222222211 22222222333333332222221  12223433332   333344


Q ss_pred             hhhhHHHHHHHHHHHhccC
Q 014698          365 GAVPGIVGVALTGYLLDST  383 (420)
Q Consensus       365 ~~~g~~~~~~~~g~l~~~~  383 (420)
                      ..++..+++.+.+.+.+..
T Consensus       332 ~~~~~~~g~~~~~~l~~~~  350 (392)
T PRK10473        332 LGIAQVCGSSLWIWLAAVL  350 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHh
Confidence            4566677777777777765

>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=99.97  E-value=6.3e-28  Score=217.86  Aligned_cols=365  Identities=13%  Similarity=0.071  Sum_probs=259.7

Q ss_pred             hhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHH--hhchHHHHHHHHHHHHhccccchhhhHHHHHhcCC
Q 014698           41 RIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPL--LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIP  118 (420)
Q Consensus        41 ~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~  118 (420)
                      ..+..+.++|+.+.++++|++|||..+.++.++..++.++..+  ..++++.++++|++.|+..+........++.|..|
T Consensus        67 s~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP  146 (485)
T KOG0569|consen   67 SIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISP  146 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcCh
Confidence            3455667778999999999999999998888887777665543  36889999999999999999999999999999999


Q ss_pred             ccccchhhHHHHhhhhhHHHHHHhhHH--HhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCC-cCccchhhh--
Q 014698          119 LEERSRAVSFVFGGLSFGSVAGLLLAP--PIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGAT-LAPRSNYIN--  193 (420)
Q Consensus       119 ~~~r~~~~~~~~~~~~~g~~~g~~l~~--~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--  193 (420)
                      ++.||......+.+..+|.+++..++.  .+.+.-.|++.+....+++++..+...++||+|++.-.+ ++++++...  
T Consensus       147 ~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~  226 (485)
T KOG0569|consen  147 KNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALK  226 (485)
T ss_pred             hhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHH
Confidence            999999999999999999999977763  344555799999999999999999999999999875442 222221100  


Q ss_pred             -------hhhhhh---hhh-hhhcccccccchhhhhhcHHHHHHHHH----HHH-hHHHHHHHhhhhhhHhhhhhCCCcc
Q 014698          194 -------MKKSLS---ASL-EEMGESLKDVPWKAIFRSKAVWAMIYA----HFC-GSWGHYTCLSWLPTYFSEELSLNLT  257 (420)
Q Consensus       194 -------~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~g~~~~  257 (420)
                             .+++..   +.. ++..++.+..++++++++|..+.-...    .+. ...+.+....|...++++ .|++..
T Consensus       227 ~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~-aG~~~~  305 (485)
T KOG0569|consen  227 FYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT-AGFTPE  305 (485)
T ss_pred             HHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH-cCCCHH
Confidence                   011111   111 111222356678899998765543222    222 223344455566666666 499999


Q ss_pred             hhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHH----hhcCCCcH---HHHHHHHHH
Q 014698          258 EAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS----SIDLGLPH---WEIVGILTA  330 (420)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~  330 (420)
                      ++.+.....++...+.++++.++.||.|||        ..++..........+++.    .......+   ..+...+..
T Consensus       306 ~a~~an~~~g~v~~~~t~~~~~lid~~gRR--------pLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~  377 (485)
T KOG0569|consen  306 EAQYANLGIGIVNLLSTLVSPFLIDRLGRR--------PLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLF  377 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            999999999999999999999999999975        222222222222111111    11111011   112333444


Q ss_pred             HHHhhhh-hhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698          331 GLALSSF-ALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFA  409 (420)
Q Consensus       331 g~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (420)
                      .++++.. .+.......|.+|++.|+.+.++......+..++-...+..+.+..|+  ..|+.+.+.+++..+..+...+
T Consensus       378 ~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~--~~filF~i~~~~~~i~~~~~lP  455 (485)
T KOG0569|consen  378 IISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP--YVFILFVIPLAIFLIYLYRYLP  455 (485)
T ss_pred             HHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hhhHHHHHHHHHHHHHHHHhCc
Confidence            4444433 344444556668999999999999999999999999999999999876  4677777888888889999999


Q ss_pred             CCCCCCC
Q 014698          410 SSKPQNF  416 (420)
Q Consensus       410 ~~~~~~~  416 (420)
                      |+|+++.
T Consensus       456 ETkgr~~  462 (485)
T KOG0569|consen  456 ETKGRTP  462 (485)
T ss_pred             ccCCCCH
Confidence            9987753

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.97  E-value=2e-27  Score=217.79  Aligned_cols=307  Identities=18%  Similarity=0.190  Sum_probs=217.3

Q ss_pred             hhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccc
Q 014698           42 IYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE  121 (420)
Q Consensus        42 l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~  121 (420)
                      .......++.++.+++.||++||+++..+..+..++...+.+ +++++.+++.|++.|++.+...+...+++.|++|+++
T Consensus        34 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~  112 (377)
T PRK11102         34 AYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACAL-AQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE  112 (377)
T ss_pred             HHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence            344445566888888899999999999999999999998876 8999999999999999999999999999999999999


Q ss_pred             cchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHH-HHhhhcccCcccCCCCcCccchhhhhhhhhhh
Q 014698          122 RSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQEGETSNGATLAPRSNYINMKKSLSA  200 (420)
Q Consensus       122 r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (420)
                      |++++++.+....+|..++|.+++.+.+..+||+.|++.++..++.. ...++.||+++++++++.+.          ++
T Consensus       113 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~  182 (377)
T PRK11102        113 FSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETLPKERRQPFHL----------RT  182 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccCcccccCCCCh----------HH
Confidence            99999999999999999999999999998999999999888777654 44455666543221111000          00


Q ss_pred             hhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhh
Q 014698          201 SLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQF  280 (420)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l  280 (420)
                               ...++++.+++|+++...+..++.....+....+.|.++.+.+|+++.+.+.......+..+++.++.+++
T Consensus       183 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l  253 (377)
T PRK11102        183 ---------TIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRF  253 (377)
T ss_pred             ---------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                     01124567888888877777777666777777788888888889999999999999999999999999999


Q ss_pred             hhhhhhcCcchHHHHHHHHHHHHH--HhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHH
Q 014698          281 ADNLIATGVETTMVRKICQTIAFL--SPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILL  358 (420)
Q Consensus       281 ~dr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~  358 (420)
                      .||+++|       + ........  ....................+.....+.+.+.......... .+..|++++++.
T Consensus       254 ~~r~g~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~  324 (377)
T PRK11102        254 VRRVGAL-------N-MLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVI-LDEFPHMAGTAS  324 (377)
T ss_pred             HHHhCHH-------H-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHH-hccccccchHHH
Confidence            9999964       2 22211111  11111111111111122222222233333332333333333 344558899999


Q ss_pred             HHHHHhhh-hhHHHHHHHHH
Q 014698          359 GITNTVGA-VPGIVGVALTG  377 (420)
Q Consensus       359 g~~~~~~~-~g~~~~~~~~g  377 (420)
                      ++.+.... ++..+++.+.+
T Consensus       325 ~~~~~~~~~~g~~~g~~~~~  344 (377)
T PRK11102        325 SLAGTLRFGIGAIVGALLSL  344 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHh
Confidence            99877654 55556665543

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.97  E-value=2.3e-27  Score=215.24  Aligned_cols=309  Identities=28%  Similarity=0.371  Sum_probs=253.8

Q ss_pred             chhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCc
Q 014698           40 GRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL  119 (420)
Q Consensus        40 ~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~  119 (420)
                      .........++.++.+++.||.+|||.+..+..+..++...... .++++.+++.|++.|++.+...+...+++.|++|+
T Consensus        40 ~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~  118 (352)
T cd06174          40 VSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAF-ASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPP  118 (352)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHcccccccHhHHHHHHHhCCc
Confidence            33444445556788888899999999999999999999998876 79999999999999999999999999999999999


Q ss_pred             cccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhh
Q 014698          120 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLS  199 (420)
Q Consensus       120 ~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (420)
                      |+|++.+++.+...++|..++|.+++.+.+..+||+.+++.++..++..+...+++                        
T Consensus       119 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------  174 (352)
T cd06174         119 KERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL------------------------  174 (352)
T ss_pred             cchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH------------------------
Confidence            99999999999999999999999999999998999999998888777655555444                        


Q ss_pred             hhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhh
Q 014698          200 ASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQ  279 (420)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~  279 (420)
                                           |+++...+..++..........+.|.+.++.+|.+..+.+.......++..++.++.++
T Consensus       175 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  233 (352)
T cd06174         175 ---------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGL  233 (352)
T ss_pred             ---------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                 34566667777778888888899999999887999999999999999999999999999


Q ss_pred             hhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHH
Q 014698          280 FADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLG  359 (420)
Q Consensus       280 l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g  359 (420)
                      +.||+++|       ++ ....+.....+......... +.........+.+.+.+...+.......+..|+++|++..|
T Consensus       234 ~~~~~~~~-------~~-~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (352)
T cd06174         234 LSDRLGRR-------RL-LLLIGLLLAALGLLLLALAP-SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASG  304 (352)
T ss_pred             HHHHHHhh-------hH-HHHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHH
Confidence            99999964       21 33344444444444333332 24445556677788888777777777888888899999999


Q ss_pred             HHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHH
Q 014698          360 ITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIV  404 (420)
Q Consensus       360 ~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~  404 (420)
                      +.+...+++..++|.+.|.+.|.. +++..+.+.+++.+++.+..
T Consensus       305 ~~~~~~~~~~~i~~~i~g~l~~~~-~~~~~~~~~~~~~~i~~i~~  348 (352)
T cd06174         305 LFNTFGSLGGALGPLLAGLLLDTG-GYGGVFLILAALALLAALLL  348 (352)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccc-CcchHHHHHHHHHHHHHHHh
Confidence            999999999999999999999875 78888888777666555443

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=99.96  E-value=5.1e-27  Score=216.11  Aligned_cols=309  Identities=15%  Similarity=0.112  Sum_probs=226.9

Q ss_pred             hhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCcc
Q 014698           41 RIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE  120 (420)
Q Consensus        41 ~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~  120 (420)
                      ........++.++.+++.||++|||++..+..+..++.+.... +++++.+++.|++.|++.+...+....+..|.++++
T Consensus        50 ~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  128 (394)
T PRK11652         50 AAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALF-AHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGT  128 (394)
T ss_pred             HHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHH
Confidence            3444455566888899999999999999999999999988875 899999999999999998888888888999999999


Q ss_pred             ccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHH-HHhhhcccCcccCCCCcCccchhhhhhhhhh
Q 014698          121 ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQEGETSNGATLAPRSNYINMKKSLS  199 (420)
Q Consensus       121 ~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (420)
                      +++++++....+..+|..++|.+++.+.+..|||+.|++.++..++.. +..++.||+++.++++.           +  
T Consensus       129 ~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~--  195 (394)
T PRK11652        129 QLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPADARRT-----------R--  195 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCccccchh-----------H--
Confidence            999999999999999999999999999998899999999887766543 34455666543211100           0  


Q ss_pred             hhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhh
Q 014698          200 ASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQ  279 (420)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~  279 (420)
                                .+.++++++|+|+++...+..+...........+.|.++++.+|+++.+.++......++.+++..+.++
T Consensus       196 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~  265 (394)
T PRK11652        196 ----------VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGR  265 (394)
T ss_pred             ----------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                      0112456777888877666555555555566667888998888999999998888888888888888888


Q ss_pred             hhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhc-CCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHH
Q 014698          280 FADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID-LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILL  358 (420)
Q Consensus       280 l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~  358 (420)
                      +.||.++        +..................... ..+.........+.+.+.+...+.......+.. |+++|++.
T Consensus       266 l~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~g~~~  336 (394)
T PRK11652        266 PNKRFST--------LMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPF-PYLAGTAG  336 (394)
T ss_pred             HHHHHHH--------HHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccchHHH
Confidence            8888763        2222222222222222222211 122333344456667777765666665555555 46889999


Q ss_pred             HHHHHhhhhhHHHHHHHHHHHhcc
Q 014698          359 GITNTVGAVPGIVGVALTGYLLDS  382 (420)
Q Consensus       359 g~~~~~~~~g~~~~~~~~g~l~~~  382 (420)
                      ++.+....+|+.+++.+.+.+.+.
T Consensus       337 ~~~~~~~~lg~~~~~~~~~~~~~~  360 (394)
T PRK11652        337 ALLGGLQNIGSGLAALLSAMLPQT  360 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCC
Confidence            999999999999999999987665

>PRK10133 L-fucose transporter; Provisional

Probab=99.96  E-value=4.9e-27  Score=217.51  Aligned_cols=334  Identities=12%  Similarity=0.093  Sum_probs=234.0

Q ss_pred             hhhhhccccccchhh---hhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHH--HhhchHHHHHHHHHHHHhccc
Q 014698           29 KKWVGLRIGRRGRIY---LKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLP--LLAGFMPGLVLSRVLVGIGEG  103 (420)
Q Consensus        29 ~~~l~~~~g~~~~l~---~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~r~l~G~~~~  103 (420)
                      ..+++.+..+.+.+.   .....++++..+++.||+||||++..+..+++++++++.  ..+++++.++++|+++|+|.+
T Consensus        53 ~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g  132 (438)
T PRK10133         53 QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLG  132 (438)
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence            455555544444443   344555688888889999999999999999999997752  237899999999999999999


Q ss_pred             cchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhh------------------c--------cchhHHH
Q 014698          104 VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE------------------N--------LGWESVF  157 (420)
Q Consensus       104 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~------------------~--------~gwr~~f  157 (420)
                      ...+..++++.|+.|+++|.+.+++.+..+.+|..++|.+++.+..                  .        .+||++|
T Consensus       133 ~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f  212 (438)
T PRK10133        133 CLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPY  212 (438)
T ss_pred             HHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHH
Confidence            9999999999998877777778999999999999999999876541                  0        2566677


Q ss_pred             HHHHHHH-HHHHHH-hhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHH
Q 014698          158 YIFGLLG-IAWFSG-FKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSW  235 (420)
Q Consensus       158 ~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (420)
                      +...... ++..+. ....||.++++  + .+++                 +.....+.++++|+|.++...+..++...
T Consensus       213 ~~~~~v~~~~~~~~~~~~~p~~~~~~--~-~~~~-----------------~~~~~~~~~~ll~~~~~~~~~l~~~~~~~  272 (438)
T PRK10133        213 MIIVAIVLLVALLIMLTKFPALQSDN--H-SDAK-----------------QGSFSASLSRLARIRHWRWAVLAQFCYVG  272 (438)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCccc--c-cccc-----------------ccchhhhHHHHHhCchHHHHHHHHHHHHH
Confidence            6544333 232222 22233321110  0 0000                 00001124578889998887777777777


Q ss_pred             HHHHHhhhhhhHh-hhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh
Q 014698          236 GHYTCLSWLPTYF-SEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS  314 (420)
Q Consensus       236 ~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (420)
                      ..+....|.+.|+ ++.+|+++.+++.......++.++++++.+++.||+++|        +.. ..+.......+.+..
T Consensus       273 ~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~--------~~l-~~~~~~~~~~~~~~~  343 (438)
T PRK10133        273 AQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPH--------KVL-AAYALIAMALCLISA  343 (438)
T ss_pred             HHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH--------HHH-HHHHHHHHHHHHHHH
Confidence            7777788899885 667899999999999999999999999999999999964        222 222323223222222


Q ss_pred             hcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhh
Q 014698          315 IDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPS  394 (420)
Q Consensus       315 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~  394 (420)
                      .... . .....+.+.|++.+...+.......+..| ++.+++.++.. ....|+.++|.+.|.+.|..|+.+..|++..
T Consensus       344 ~~~~-~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~-~~~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~  419 (438)
T PRK10133        344 FAGG-H-VGLIALTLCSAFMSIQYPTIFSLGIKNLG-QDTKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPA  419 (438)
T ss_pred             HcCC-h-HHHHHHHHHHHHHHHHHHHHHHHHHcccc-hhhccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHH
Confidence            2222 2 33445667888888888888877777654 45677888876 4557899999999999998743566666543


Q ss_pred             H
Q 014698          395 I  395 (420)
Q Consensus       395 ~  395 (420)
                      +
T Consensus       420 ~  420 (438)
T PRK10133        420 L  420 (438)
T ss_pred             H
Confidence            3

>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=99.96  E-value=1.3e-28  Score=225.56  Aligned_cols=353  Identities=16%  Similarity=0.186  Sum_probs=245.2

Q ss_pred             hhhccccccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhH
Q 014698           31 WVGLRIGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAAT  110 (420)
Q Consensus        31 ~l~~~~g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~  110 (420)
                      .-+++++...+++...+.++.+..+.++||....+.+....+++++.+++.+. .+|++.+++.|++.|+.++..+|...
T Consensus        78 ~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~-~~s~~~~ialr~llGl~es~~wP~~~  156 (495)
T KOG2533|consen   78 LVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAA-VHSFPGLIALRFLLGLFESGGWPGVV  156 (495)
T ss_pred             hhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHhcccchHHH
Confidence            34556777888888888888999999999999999999999999999988876 89999999999999999999999999


Q ss_pred             HHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhh------hccchhHHHHHHHHHHHHH-HHHhhhcccCcccCCC
Q 014698          111 DLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII------ENLGWESVFYIFGLLGIAW-FSGFKILQEGETSNGA  183 (420)
Q Consensus       111 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~------~~~gwr~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~  183 (420)
                      .+++.|+.++||++.++++.+..++|.++|.+++..+.      ...||||.|.+.+++.++. ++..+++|++|.+. .
T Consensus       157 ~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~-~  235 (495)
T KOG2533|consen  157 AILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKA-W  235 (495)
T ss_pred             HHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhc-c
Confidence            99999999999999999999999999999999998863      3569999999999998885 46666777776533 1


Q ss_pred             CcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHH
Q 014698          184 TLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVS  263 (420)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  263 (420)
                      -..++|+....++....+.++..++.++..+++.+++|.+|...+..++.....+++.+|+|.++++..|++..++..+.
T Consensus       236 fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls  315 (495)
T KOG2533|consen  236 FLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLS  315 (495)
T ss_pred             ccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhcccc
Confidence            11111111111111111111111224556678999999999999999999999999999999999986679999999999


Q ss_pred             HhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhh
Q 014698          264 ILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLY  343 (420)
Q Consensus       264 ~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  343 (420)
                      .+..++++++.+++|.++||....    ...|........+............ +.........+....+..........
T Consensus       316 ~~~~~~g~v~~i~ag~lsdr~~~~----~~~~~~~~~~~~~~~~~g~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (495)
T KOG2533|consen  316 TPYDVGGIVGLILAGYLSDRLKTI----FARRLLFIVFLCLYAIIGAISLLAA-AVLPGAYGAFLIGPYGLIATAIIALS  390 (495)
T ss_pred             chHHhhhHHHHHHHHHHHHHHhhh----HHHHHHHHHHHHHHHHHHHHHHHhh-ccchHHhHHHHhcchhhHHHHHHHHh
Confidence            999999999999999999996300    0003333333333333332333322 22333333333333333333333334


Q ss_pred             hhhhccCc-cchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeee
Q 014698          344 CTHQDISP-EYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSL  390 (420)
Q Consensus       344 ~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~  390 (420)
                      ...+...+ .++-+..+......+.++.++|.+.-....-...+...|
T Consensus       391 w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f  438 (495)
T KOG2533|consen  391 WTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVF  438 (495)
T ss_pred             hccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHH
Confidence            44444444 334444555455555555555544432222111445555

>TIGR00896 CynX cyanate transporter

Probab=99.96  E-value=2.1e-27  Score=215.50  Aligned_cols=311  Identities=16%  Similarity=0.156  Sum_probs=227.3

Q ss_pred             chhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCc
Q 014698           40 GRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL  119 (420)
Q Consensus        40 ~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~  119 (420)
                      ..+......++.+..+.+.||+++||++..+.++..++.+.. . .++++.+++.|++.|++.+...+....++.|++| 
T Consensus        41 ~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~-~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-  117 (355)
T TIGR00896        41 TALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-S-APGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-  117 (355)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-H-hccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-
Confidence            334445555667788888999999999999998888877766 4 7888999999999999999888888889999986 


Q ss_pred             cccchhhHHHHhhhhhHHHHHHhhHHHhhhcc--chhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhh
Q 014698          120 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENL--GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKS  197 (420)
Q Consensus       120 ~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (420)
                      ++|++++++.+.+.++|..+++.+++.+.+..  +||+.|...++..++...  .++|+.++++++++.           
T Consensus       118 ~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----------  184 (355)
T TIGR00896       118 QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL--AWIPQVRRRVAANQT-----------  184 (355)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH--HHhhhhccccCCCCC-----------
Confidence            68999999999999999999999998888764  399999877665443322  234443321111000           


Q ss_pred             hhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhh
Q 014698          198 LSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIA  277 (420)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  277 (420)
                                 .++.+.++++|+|.++...+..++....++....++|.|+++ .|.++.+.+...+...++.++++++.
T Consensus       185 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~  252 (355)
T TIGR00896       185 -----------TTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLI  252 (355)
T ss_pred             -----------CCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhH
Confidence                       001123567888988887777777777788888899999987 59999999999999999999999999


Q ss_pred             hhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccC-ccchHH
Q 014698          278 AQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDIS-PEYASI  356 (420)
Q Consensus       278 g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~  356 (420)
                      |++.||+++|       |+.. ..+......+........++...  ....+.|++.+...+.......++.+ ++++++
T Consensus       253 g~l~dr~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~  322 (355)
T TIGR00896       253 PALARRVKDQ-------RGIV-AVLAVLQLVGLCGLLFAPMHGLW--AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAA  322 (355)
T ss_pred             HHHHhhhccc-------hHHH-HHHHHHHHHHHHHHHHhhhhHHH--HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHH
Confidence            9999999653       3222 22323333232222222222221  23456677777666555555544444 567899


Q ss_pred             HHHHHHHhhhhhHHHHHHHHHHHhccCCceee
Q 014698          357 LLGITNTVGAVPGIVGVALTGYLLDSTHSWSM  388 (420)
Q Consensus       357 ~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~  388 (420)
                      ..++.+...+++..++|.+.|.+.|+.|+|..
T Consensus       323 ~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~~  354 (355)
T TIGR00896       323 LSAMAQSIGYLLAALGPLFVGVLHDISGNWLM  354 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence            99999999999999999999999999877653

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.96  E-value=1.4e-26  Score=212.71  Aligned_cols=336  Identities=14%  Similarity=0.038  Sum_probs=212.4

Q ss_pred             hhhhhccccccchhhhhHHhHH----hhhhcchhhhcchhHHH-HHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccc
Q 014698           29 KKWVGLRIGRRGRIYLKDTNLL----ELLRLPLLFVTWIRKVL-QTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEG  103 (420)
Q Consensus        29 ~~~l~~~~g~~~~l~~~~~~~~----~l~~~p~~~~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~  103 (420)
                      .++++.+....+.+.......+    .+.+++ .||+++||.+ ..+.+..+++..+.++ +++++.+++.+.+.|...+
T Consensus        43 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~  120 (393)
T PRK15011         43 TDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAW-NRNYFVLLFVGVFLSSFGS  120 (393)
T ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHH
Confidence            4445555555555544333333    333333 8999988764 5556666677766665 8888887666655554456


Q ss_pred             cchhhhHHHHHhcCCcccc--chhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHH-HHhhhcccCccc
Q 014698          104 VSPSAATDLIARSIPLEER--SRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQEGETS  180 (420)
Q Consensus       104 ~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~-~~~~~~~~~~~~  180 (420)
                      ...|...+++.|+.++++|  +...++.+.+.++|.++||++++.+.+.+|||..|++.++..++.. ....++||++++
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~  200 (393)
T PRK15011        121 TANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKE  200 (393)
T ss_pred             hhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCC
Confidence            7788888889998876655  3445788899999999999999999999999999999988777654 444456665432


Q ss_pred             CCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhh
Q 014698          181 NGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAA  260 (420)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  260 (420)
                      +++++.+              .++         .++  +.+..+...............+..+.|.|+++.+|+++.+.+
T Consensus       201 ~~~~~~~--------------~~~---------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g  255 (393)
T PRK15011        201 LPLATGT--------------LEA---------PRR--NRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAG  255 (393)
T ss_pred             Ccccccc--------------ccc---------ccc--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence            2111000              000         000  012222333333444445555667899999888899999999


Q ss_pred             HHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhh
Q 014698          261 WVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALS  340 (420)
Q Consensus       261 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  340 (420)
                      .+.+...+..+++.++.|+++||+++|       + .. ..+............. .++........++.+...+.....
T Consensus       256 ~~~~~~~~~~i~~~~~~G~l~dr~g~~-------~-~~-~~~~~~~~~~~~~~~~-~~~~~~~l~~~~l~~~~~g~~~~~  325 (393)
T PRK15011        256 VMMGTAAGLEIPTMLIAGYFAKRLGKR-------F-LM-RVAAVAGVCFYAGMLM-AHSPAILLGLQLLNAIYIGILGGI  325 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhChH-------H-HH-HHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHH
Confidence            888877788888999999999999975       2 22 2222222222222222 222333333333333443333333


Q ss_pred             hhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHH
Q 014698          341 GLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTI  403 (420)
Q Consensus       341 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~  403 (420)
                      ...... +..|++++++.++.+...++|..++|.+.|.+.|.. +++..+.+.+++.+++...
T Consensus       326 ~~~~~~-~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~-g~~~~~~~~~~~~~~~~~~  386 (393)
T PRK15011        326 GMLYFQ-DLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIW-NYHAVFWFALVMIIATLFC  386 (393)
T ss_pred             HHHHHH-HhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHH
Confidence            333333 444567999999999999999999999999999986 6777777655554444433

>TIGR00895 2A0115 benzoate transport

Probab=99.96  E-value=1.4e-27  Score=220.55  Aligned_cols=325  Identities=23%  Similarity=0.262  Sum_probs=229.4

Q ss_pred             hhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCcccc
Q 014698           43 YLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER  122 (420)
Q Consensus        43 ~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r  122 (420)
                      ......++.++.+++.||++||+++..+..+..++.++... +++++.+++.|++.|++.+...+...+++.|++|+++|
T Consensus        61 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r  139 (398)
T TIGR00895        61 GLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCAL-ATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFR  139 (398)
T ss_pred             HHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHH-ccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhh
Confidence            33444556778888899999999999999999998888875 88999999999999999999999999999999999999


Q ss_pred             chhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHH-HHHHhhhcccCcccCCCCcCccchhhhhhhhhh--
Q 014698          123 SRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIA-WFSGFKILQEGETSNGATLAPRSNYINMKKSLS--  199 (420)
Q Consensus       123 ~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  199 (420)
                      ++++++...+..+|..+++.+++.+.+..|||..|++.++..++ ..+...++||+++...+++.++......+....  
T Consensus       140 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (398)
T TIGR00895       140 GTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQ  219 (398)
T ss_pred             chhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999998765555 445556667665432221111100000000000  


Q ss_pred             -h---hhhhh-ccc-ccccchhhhhh---cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHH
Q 014698          200 -A---SLEEM-GES-LKDVPWKAIFR---SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLAS  270 (420)
Q Consensus       200 -~---~~~~~-~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  270 (420)
                       +   ...+. .+. ..+...+.+++   ++..+...+..++.....+....+.|.+. +.+|.++.+.+.......++.
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~  298 (398)
T TIGR00895       220 AEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLM-VELGFSLSLAATGGALFNFGG  298 (398)
T ss_pred             ccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHH
Confidence             0   00000 000 01111122222   23344444455555666677777888444 557999999999999999999


Q ss_pred             HHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccC
Q 014698          271 VLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDIS  350 (420)
Q Consensus       271 ~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  350 (420)
                      +++.++.+++.||+++|         ...............+.. ...+........++.|++.+...+.......+..|
T Consensus       299 ~~~~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  368 (398)
T TIGR00895       299 VIGSIIFGWLADRLGPR---------VTALLLLLGAVFAVLVGS-TLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYP  368 (398)
T ss_pred             HHHHHHHHHHHhhcchH---------HHHHHHHHHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            99999999999999852         222222222222222222 12234444555677788887777777777778889


Q ss_pred             ccchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698          351 PEYASILLGITNTVGAVPGIVGVALTGYL  379 (420)
Q Consensus       351 ~~~~g~~~g~~~~~~~~g~~~~~~~~g~l  379 (420)
                      +++|+++.|+.+....+|..++|.+.|.+
T Consensus       369 ~~~~g~~~g~~~~~~~~g~~~g~~~~G~l  397 (398)
T TIGR00895       369 TAIRATGVGWAIGIGRLGAIIGPILAGYL  397 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence            99999999999999999999999999875

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=99.96  E-value=1.3e-27  Score=248.04  Aligned_cols=330  Identities=11%  Similarity=0.035  Sum_probs=240.4

Q ss_pred             hhhhHHhHHhhhhcchhhhcchhHHHHH---HHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCC
Q 014698           42 IYLKDTNLLELLRLPLLFVTWIRKVLQT---GVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIP  118 (420)
Q Consensus        42 l~~~~~~~~~l~~~p~~~~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~  118 (420)
                      .+.....+.+.+.|.+.||++|||++..   ..+...+... .++..++++.++++|+++|++.+...|+..+++.|++|
T Consensus        60 ~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~-~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~  138 (1140)
T PRK06814         60 VFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAI-YGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLN  138 (1140)
T ss_pred             HHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHH-HHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcC
Confidence            3444455567788888999999997533   2222333222 23335889999999999999999999999999999999


Q ss_pred             ccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhh
Q 014698          119 LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSL  198 (420)
Q Consensus       119 ~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (420)
                      +++|++++|+.+++.++|.++||++++++.+..+|++.|...++..++..+..+++|++++.....+.+...        
T Consensus       139 ~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  210 (1140)
T PRK06814        139 KDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNAAPDLKIDRNI--------  210 (1140)
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCeeccch--------
Confidence            999999999999999999999999999999999999999555555555556666677654332211111000        


Q ss_pred             hhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhh
Q 014698          199 SASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAA  278 (420)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g  278 (420)
                      ..   +     ....++.+.++|.++...+..++.++.......++|.|+++.+|.++.+.|++.+..+++.+++.++.|
T Consensus       211 ~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g  282 (1140)
T PRK06814        211 IR---S-----TITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLAS  282 (1140)
T ss_pred             HH---H-----HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence            00   0     011256778899999988888888888888888999999999999999999999999999999999999


Q ss_pred             hhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh------------------hcCCCcHHHHHHHHHHHHHhhhhhhh
Q 014698          279 QFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS------------------IDLGLPHWEIVGILTAGLALSSFALS  340 (420)
Q Consensus       279 ~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~g~~~~~~~~~  340 (420)
                      ++.||..+++        ......+......+.+..                  ....+.+...+..+++|++.+....+
T Consensus       283 ~l~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  354 (1140)
T PRK06814        283 KLSEGRITLL--------YVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVP  354 (1140)
T ss_pred             HHhCCceeee--------eehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHH
Confidence            9998766542        111111111111111111                  01123344455567778888877777


Q ss_pred             hhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHH
Q 014698          341 GLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIF  396 (420)
Q Consensus       341 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~  396 (420)
                      .....++..|++.+|+++|+.+++..++..+++.+.|.+.+...++...+++.+.+
T Consensus       355 ~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~  410 (1140)
T PRK06814        355 LFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA  410 (1140)
T ss_pred             HHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence            77888888999999999999999999999999999999986544555555544443

>PRK10054 putative transporter; Provisional

Probab=99.96  E-value=7.4e-28  Score=220.77  Aligned_cols=350  Identities=10%  Similarity=0.008  Sum_probs=238.6

Q ss_pred             hhhccccccchhhhh---HHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchh
Q 014698           31 WVGLRIGRRGRIYLK---DTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPS  107 (420)
Q Consensus        31 ~l~~~~g~~~~l~~~---~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~  107 (420)
                      +++-+..+.+.+...   ...+.++..+.+.||.++||++..+.++..++.+..++ +++++.+++.|.+.|.+.+...+
T Consensus        37 ~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~  115 (395)
T PRK10054         37 QYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPL-VNNVTLVVLFFALINCAYSVFST  115 (395)
T ss_pred             HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHH
Confidence            334333444444333   33344677777899999999999999999888888876 88899999999999988777788


Q ss_pred             hhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHH-HHhhhcccCcccCCCCcC
Q 014698          108 AATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQEGETSNGATLA  186 (420)
Q Consensus       108 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  186 (420)
                      ...++..|..|+++|++++++.....++|.+++|.+++.+.+ .+||..|++.++..++.. ...+++||+++++++++ 
T Consensus       116 ~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~-  193 (395)
T PRK10054        116 VLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIATET-  193 (395)
T ss_pred             HHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccccccccch-
Confidence            889999999999999999999999999999999999998875 699999998887776654 33444565543221110 


Q ss_pred             ccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhh--hCCCcchhhHHHH
Q 014698          187 PRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE--LSLNLTEAAWVSI  264 (420)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~  264 (420)
                        +      +              ..+.++.+|+|+++...+..++..+.......+.+.|..+.  .+.+....+....
T Consensus       194 --~------~--------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  251 (395)
T PRK10054        194 --G------S--------------VWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLP  251 (395)
T ss_pred             --h------h--------------hhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHH
Confidence              0      0              00124677889988887777776666666666777776543  3455556677777


Q ss_pred             hhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhh
Q 014698          265 LPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYC  344 (420)
Q Consensus       265 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  344 (420)
                      ...+.....+...+++.||.++|         .....+...............++.+...+.....+++.+...+.....
T Consensus       252 ~~~~~~~~~~~~~g~~~~~~~~~---------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~  322 (395)
T PRK10054        252 VNAAMVVSLQYSVGRRLNAANIR---------PLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYML  322 (395)
T ss_pred             hhhhheeeehhHHHHHHccCCch---------hHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence            77777777777888999998753         222333333333333232222223333445566677766555555555


Q ss_pred             hhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCCCCCCCC
Q 014698          345 THQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTR  419 (420)
Q Consensus       345 ~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (420)
                      +.+..|++.++++.+..+ ...+|..+||.++|.+.|+. ++...+.+.+.+..+..   ....++.+.++|.++
T Consensus       323 ~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~-g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  392 (395)
T PRK10054        323 IDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTL-PPWSLFVILALAIVAAW---LLMLKGMRARPWGQP  392 (395)
T ss_pred             HHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHc-ChhhHHHHHHHHHHHHH---HHHHhccccCcccCC
Confidence            666678899999998755 67789999999999999997 66656655433332222   222255566666554

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.96  E-value=1.2e-26  Score=212.26  Aligned_cols=333  Identities=12%  Similarity=-0.025  Sum_probs=238.1

Q ss_pred             hhhhhccccccchhhhhHHh---HHhhhhcchhhhcchhH----HHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhc
Q 014698           29 KKWVGLRIGRRGRIYLKDTN---LLELLRLPLLFVTWIRK----VLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIG  101 (420)
Q Consensus        29 ~~~l~~~~g~~~~l~~~~~~---~~~l~~~p~~~~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~  101 (420)
                      ..+++.+..+.+.+.+....   +.+.+.+|+.||++||+    ++..+..++.+  .... .+++++.+++.|.++|.+
T Consensus        31 l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~-~~~~~~~l~~~~~l~~~~  107 (382)
T TIGR00902        31 LKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSA-GAHNAWLLFIAIGLFALF  107 (382)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHH-hhhhHHHHHHHHHHHHHH
Confidence            34455555555555444333   34667888899998643    33333323322  1222 378899999999999999


Q ss_pred             cccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccC
Q 014698          102 EGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSN  181 (420)
Q Consensus       102 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~  181 (420)
                      .+...|...++..|+  +++|++..|......++|.+++|++++.+.+.+|||..|++.+....+.. ....++|+++++
T Consensus       108 ~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~~~~~  184 (382)
T TIGR00902       108 FSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFML-IGFLIKPTIPPK  184 (382)
T ss_pred             HccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH-HHHHcCCCCCCC
Confidence            888899988887765  47899999999999999999999999999999999999988765533333 333344432221


Q ss_pred             CCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhH
Q 014698          182 GATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAW  261 (420)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  261 (420)
                      ++++ ++                  +..+..+.++++|+|+++...+..++..........+.|.|+++ .|.++.+.|.
T Consensus       185 ~~~~-~~------------------~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~  244 (382)
T TIGR00902       185 DAIP-ED------------------ESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGL  244 (382)
T ss_pred             cccc-cc------------------ccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHH
Confidence            1110 00                  00011235688999999999988888888888889999999987 6999999999


Q ss_pred             HHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhh
Q 014698          262 VSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSG  341 (420)
Q Consensus       262 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  341 (420)
                      ......++.++...+.+++.||+++|         ..+..+.....+........ ++.+.......+.|+..+...+..
T Consensus       245 l~~~~~~~~i~~~~~~~~l~~r~g~~---------~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~q~l~g~~~~~~~~~~  314 (382)
T TIGR00902       245 LWGIGVLAEIIIFAFSNKLFQNCSAR---------DLLLISAIACVGRWAIIGAI-EAFPLIFLLQILHCGTFAVCHLAA  314 (382)
T ss_pred             HHHHHHHHHHHHHHHhHHHHhhCCHH---------HHHHHHHHHHHHHHHHHHhH-hhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99998899999999999999999853         33445555555554444432 234445555688888888777777


Q ss_pred             hhhhhhccCccchHHHHHHHHH-hhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHH
Q 014698          342 LYCTHQDISPEYASILLGITNT-VGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLT  400 (420)
Q Consensus       342 ~~~~~~~~~~~~~g~~~g~~~~-~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~  400 (420)
                      ...+.+. |+++++++.++++. ...+|..++|.+.|.+.|+. +. ..|...+.+.+++
T Consensus       315 ~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~-g~-~~~~~~~~~~~~~  371 (382)
T TIGR00902       315 MRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL-GA-GTFVFMAIIAAAA  371 (382)
T ss_pred             HHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cH-HHHHHHHHHHHHH
Confidence            7777665 88899999999874 56799999999999999997 44 4566655554433

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.96  E-value=7.6e-27  Score=215.20  Aligned_cols=331  Identities=14%  Similarity=0.116  Sum_probs=220.0

Q ss_pred             hHHhhhhcchhhhc-----chh-HHHHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHhccccchhhhHHHHHhcCCc
Q 014698           48 NLLELLRLPLLFVT-----WIR-KVLQTGVLIWSLATALLPLLA--GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL  119 (420)
Q Consensus        48 ~~~~l~~~p~~~~~-----~~r-~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~  119 (420)
                      .+...+.+|+.||+     +|| +++..+..+.+++.....+..  ++++.+.+..++.++..+...+...+++.|++|+
T Consensus        46 ~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~  125 (402)
T PRK11902         46 YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHP  125 (402)
T ss_pred             HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence            46789999999999     655 478888888877777666521  4577788888888888889999999999999999


Q ss_pred             cccchhhHHHHhhhhhHHHHHHhhHHHhhhc-cchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhh
Q 014698          120 EERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSL  198 (420)
Q Consensus       120 ~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (420)
                      |||+++.++...+.++|.++++.++..+.+. +|||..|++.++..++..+...+.||+++++++++  +.         
T Consensus       126 ~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~~~~~--~~---------  194 (402)
T PRK11902        126 EERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTTLWAPEPEVPARPPR--SL---------  194 (402)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCcccccccc--hh---------
Confidence            9999999999999999999999999999885 59999999988887765555566666543221110  00         


Q ss_pred             hhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhH-HHHHHHHHhh
Q 014698          199 SASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPP-LASVLVTSIA  277 (420)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~  277 (420)
                      .+        ..+.++++++|||.++...+..++..........+.+.++.+.+|+++.+.+++....+ ++.+++.++.
T Consensus       195 ~~--------~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~  266 (402)
T PRK11902        195 GE--------AVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAG  266 (402)
T ss_pred             HH--------HHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHH
Confidence            00        01123567889999888777666655554444445556677778999999998876655 4688999999


Q ss_pred             hhhhhhhhhcCcchHHHHHHHHHHHHHHhHH--HHHHHhhcCCCcHHHHHHHH----HHHHHhhhhhhhhhhhhhhccCc
Q 014698          278 AQFADNLIATGVETTMVRKICQTIAFLSPAV--CMTLSSIDLGLPHWEIVGIL----TAGLALSSFALSGLYCTHQDISP  351 (420)
Q Consensus       278 g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~  351 (420)
                      +++.||+++|       + ............  .+.......++.+.......    ..++..+.........+.+..|.
T Consensus       267 g~l~~r~g~~-------~-~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  338 (402)
T PRK11902        267 GTLMVRLGLY-------R-SLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSA  338 (402)
T ss_pred             HHHHHHHhHH-------H-HHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcH
Confidence            9999999864       2 222222221111  11111222222222222222    23333333333333344444444


Q ss_pred             cchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccC
Q 014698          352 EYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFAS  410 (420)
Q Consensus       352 ~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (420)
                      +    ..+..+....++...++.+.|.+.|.. ++...|...+.+.+++..+.+...++
T Consensus       339 ~----~~~~~~~~~~l~~~~~~~~~G~l~~~~-G~~~~f~~~~~~~~~~~~~~~~~~~~  392 (402)
T PRK11902        339 T----QYALLSALASVGRVYVGPTSGYLVEAY-GWPGFYLMTVVIALPGLALLWLMRGT  392 (402)
T ss_pred             H----HHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            3    445566666777877778999999997 68777777766665555554444433

>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]

Probab=99.96  E-value=1.2e-26  Score=214.88  Aligned_cols=347  Identities=18%  Similarity=0.209  Sum_probs=264.3

Q ss_pred             hhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHH-HHHHHHHhccccchhhhHHHHHhcCCccccchhhHHH
Q 014698           51 ELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLV-LSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFV  129 (420)
Q Consensus        51 ~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~  129 (420)
                      ..+...+.+|++.|++.+.|.++.+++.++.++ ++++|.++ ..-++.|+|.+..+..+..++..+++ |+|+.+.|+.
T Consensus        98 gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF-~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia  175 (509)
T KOG2504|consen   98 GPLVSALCNRFGCRTVMIAGGLVAALGLLLSSF-ATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIA  175 (509)
T ss_pred             ccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhh
Confidence            444444589999999999999999999999987 88887655 46689999999999999999998886 8899999999


Q ss_pred             HhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccC-CC--------------CcCc-----cc
Q 014698          130 FGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSN-GA--------------TLAP-----RS  189 (420)
Q Consensus       130 ~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~--------------~~~~-----~~  189 (420)
                      .++.++|..+-|.+..++.+.+|||+.+++.+.+.+-..+......+..+.. +.              ...+     .+
T Consensus       176 ~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (509)
T KOG2504|consen  176 VSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISE  255 (509)
T ss_pred             hccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhcccccccccccccccccccc
Confidence            9999999999999999999999999999999888866554444444422211 10              0000     00


Q ss_pred             hhhhhhh---hhhhhhhhhcc-----cccccch---hhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcch
Q 014698          190 NYINMKK---SLSASLEEMGE-----SLKDVPW---KAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTE  258 (420)
Q Consensus       190 ~~~~~~~---~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  258 (420)
                      +.....+   ......++.++     ..+....   .+++|+|.++...+...+...++.....++|.|..+ .|++..+
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~  334 (509)
T KOG2504|consen  256 RDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS-LGLSSND  334 (509)
T ss_pred             CCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhh
Confidence            0000000   00000000000     1111111   588999999999999999999999999999999995 5999999


Q ss_pred             hhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhh
Q 014698          259 AAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFA  338 (420)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  338 (420)
                      ++.+.+..++..++++++.|++.|+...+       ++.....+.+..++.........+ ........+++|+..+...
T Consensus       335 aa~l~Siigi~~i~gRi~~G~laD~~~~~-------~~~~~~~~ll~~gl~~~~~p~~~~-~~~l~~~~~~fG~~~g~~~  406 (509)
T KOG2504|consen  335 AAFLLSIIGVSDIIGRIILGLLADKPGIR-------ALVLFLLTLLIAGLARLFLPFATT-YVGLIVFSILFGFCVGSFS  406 (509)
T ss_pred             hHHHHHHHHHhhhhhhhhhhhhcCccccc-------hHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999998754       455555555555555544443332 3455556678888888777


Q ss_pred             hhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhc
Q 014698          339 LSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAF  408 (420)
Q Consensus       339 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (420)
                      ........+.++.++-..+.|+...+..++..+||++.|.+.|..++|...|+..+.+.++++...+...
T Consensus       407 ~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~  476 (509)
T KOG2504|consen  407 SLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR  476 (509)
T ss_pred             HHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence            6666677788899999999999999999999999999999999999999999999988877776555444

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.96  E-value=5.5e-26  Score=208.02  Aligned_cols=329  Identities=14%  Similarity=0.058  Sum_probs=224.6

Q ss_pred             hhhhccccccchhhhhH---HhHHhhhhcchhhhcchh----HHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhcc
Q 014698           30 KWVGLRIGRRGRIYLKD---TNLLELLRLPLLFVTWIR----KVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGE  102 (420)
Q Consensus        30 ~~l~~~~g~~~~l~~~~---~~~~~l~~~p~~~~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~  102 (420)
                      .+.+.+....+.+.+.+   ..+++++.+|+.||++||    |.+.+...+..   ......+++++.+++.|++.|++.
T Consensus        32 ~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~i~~~l~g~~~  108 (382)
T PRK11128         32 KGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFA---VAFWFGAHSFWLLFVAIGLFNLFF  108 (382)
T ss_pred             HhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHH---HHHHHhcccHHHHHHHHHHHHHHH
Confidence            33444444444444333   344577778889999973    33333322222   222233688999999999999998


Q ss_pred             ccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCC
Q 014698          103 GVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNG  182 (420)
Q Consensus       103 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~  182 (420)
                      +...|...+++.|+  +++|+++.+......++|.++||++++++.+++|||..|++.++..++..+...+.||++++++
T Consensus       109 ~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  186 (382)
T PRK11128        109 SPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQLLRPTIMPQGE  186 (382)
T ss_pred             cccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHccCCCCCccc
Confidence            88999888888887  4678899999999999999999999999999999999999877655444433333443322111


Q ss_pred             CCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHH
Q 014698          183 ATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWV  262 (420)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  262 (420)
                      +++ +                   +++...++++++|+|+++...+..++..........+.|.|++| .|.++.+.|.+
T Consensus       187 ~~~-~-------------------~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~  245 (382)
T PRK11128        187 SRQ-Q-------------------ESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYL  245 (382)
T ss_pred             ccc-c-------------------cccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHH
Confidence            100 0                   00012346789999999988887787777777778888999976 69999999999


Q ss_pred             HHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhh
Q 014698          263 SILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGL  342 (420)
Q Consensus       263 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  342 (420)
                      .+...+..++...+.+++.||++++         ..+..+.....+........ ++.+...+..++.|++.+...+...
T Consensus       246 ~~~~~~~~~~~~~~~g~l~~r~~~~---------~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~  315 (382)
T PRK11128        246 WSLGVVAEVLIFAFSNRLFRRWSAR---------DLLLLSAICGVVRWGLMGST-TALPWLIVIQILHCGTFTVCHLAAM  315 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCHH---------HHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9988888889999999999999853         22334444444444333332 3344445556677777775555554


Q ss_pred             hhhhhccCccchHHHHHHHHHh-hhhhHHHHHHHHHHHhccCCceeeeehhhhHHH
Q 014698          343 YCTHQDISPEYASILLGITNTV-GAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFF  397 (420)
Q Consensus       343 ~~~~~~~~~~~~g~~~g~~~~~-~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~  397 (420)
                      ....+ .+++++++..+..+.. ..+|..++|.+.|.+.|..+ . ..++..+++.
T Consensus       316 ~~~~~-~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g-~-~~~~~~~~~~  368 (382)
T PRK11128        316 RYIAA-RPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG-A-GVFWVMALVA  368 (382)
T ss_pred             HHHHH-CCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHH
Confidence            44444 4677788999988744 56777999999999999974 3 2455544443

>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]

Probab=99.96  E-value=4.2e-29  Score=217.63  Aligned_cols=340  Identities=15%  Similarity=0.133  Sum_probs=243.4

Q ss_pred             ccccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHh
Q 014698           36 IGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIAR  115 (420)
Q Consensus        36 ~g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~  115 (420)
                      .|-.+..+...+.+.+.+.+.++||++||+++..|..+|.++.+++++ ++.+|+++++|.+.|+|.+...|.++++++|
T Consensus        70 ~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~f-s~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD  148 (493)
T KOG1330|consen   70 LGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGF-SNHFWQVLLCRGFVGIGEASYSPIAPSLIAD  148 (493)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccchhhhcccchhHhhh
Confidence            344455555566666777777899999999999999999999999997 8999999999999999999999999999999


Q ss_pred             cCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccc-hhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhh
Q 014698          116 SIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINM  194 (420)
Q Consensus       116 ~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (420)
                      .+|.++|++.+++++.+.++|..+|.+.+..+.+..+ |||.|+..+++++++.++.+++.++|++.++++.+.+...  
T Consensus       149 ~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~--  226 (493)
T KOG1330|consen  149 SFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKM--  226 (493)
T ss_pred             cCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcC--
Confidence            9999999999999999999999999999999888766 9999999999999876655555554443322222211100  


Q ss_pred             hhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhh---hCCCcchhhHHHHhhHHHHH
Q 014698          195 KKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE---LSLNLTEAAWVSILPPLASV  271 (420)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~  271 (420)
                      .+         .......+.+.+.|++.+....+......+....+..|.|.+....   .|.+..+..++..+...++.
T Consensus       227 ~~---------~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~  297 (493)
T KOG1330|consen  227 VK---------PFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGS  297 (493)
T ss_pred             CC---------CccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhch
Confidence            00         0111122345566667777777777777777777777777776553   35566666667788888999


Q ss_pred             HHHHhhhhhhhhhhhcCcchHHHH--HHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhh-hhhhc
Q 014698          272 LVTSIAAQFADNLIATGVETTMVR--KICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLY-CTHQD  348 (420)
Q Consensus       272 ~~~~~~g~l~dr~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~  348 (420)
                      +|.+++|.++||+.+...+....+  ......+....+..+.+.........+..+.++++|.......+..+. ...+.
T Consensus       298 lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~v  377 (493)
T KOG1330|consen  298 LGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEV  377 (493)
T ss_pred             hhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEe
Confidence            999999999999776432211112  222233333344444444444444555555666667666655555544 34456


Q ss_pred             cCccchHHHHHHHHHhhhh-hHHHHHHHHHHHhccCCcee
Q 014698          349 ISPEYASILLGITNTVGAV-PGIVGVALTGYLLDSTHSWS  387 (420)
Q Consensus       349 ~~~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~~~~~~  387 (420)
                      +||++|.++.++...+..+ |.+-+|++.|.+.|+.-+++
T Consensus       378 V~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~  417 (493)
T KOG1330|consen  378 VPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK  417 (493)
T ss_pred             cCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence            8999999999999877774 55666669999998764544

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=99.96  E-value=1.3e-26  Score=211.47  Aligned_cols=321  Identities=17%  Similarity=0.135  Sum_probs=214.1

Q ss_pred             hhhhhccccccch---hhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHHhcccc
Q 014698           29 KKWVGLRIGRRGR---IYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAG-FMPGLVLSRVLVGIGEGV  104 (420)
Q Consensus        29 ~~~l~~~~g~~~~---l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~  104 (420)
                      .++++.+..+.+.   .......++.++.+++.||++|||++..+.++..++.+++++ ++ +++.+++.|+++|++.+ 
T Consensus        29 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~g~~~~-  106 (366)
T TIGR00886        29 KDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGL-AVQSYSVLLLLRLFIGIAGG-  106 (366)
T ss_pred             HHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHhch-
Confidence            3444444433333   334444566888888899999999999999999999998886 77 99999999999999855 


Q ss_pred             chhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhh----------ccchhHHH-HHHHHHHHHH-HHHhh
Q 014698          105 SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE----------NLGWESVF-YIFGLLGIAW-FSGFK  172 (420)
Q Consensus       105 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~----------~~gwr~~f-~~~~~~~~~~-~~~~~  172 (420)
                      ..+...++++|++|+++|++++++.....++|..+++.+++.+.+          ..+||+.| ...++...+. .+...
T Consensus       107 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~  186 (366)
T TIGR00886       107 SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFF  186 (366)
T ss_pred             hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHH
Confidence            456678999999999999999999998888888888888776654          24899999 4445554443 34444


Q ss_pred             hcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhh
Q 014698          173 ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEEL  252 (420)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (420)
                      ..+|++++++++++.+.+.    ...     + .++....+.++.+++|+++...+..++.....+....+.|.|+++.+
T Consensus       187 ~~~~~~~~~~~~~~~~~~~----~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
T TIGR00886       187 VGADTPPGKPATGKLSFKG----ARW-----S-VGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQF  256 (366)
T ss_pred             hcccCCcccccchhccccc----ccc-----c-ccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            4555543221111100000    000     0 00001113457788898888887777777777788889999999989


Q ss_pred             CCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCC-CcHHHHHHHHHHH
Q 014698          253 SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLG-LPHWEIVGILTAG  331 (420)
Q Consensus       253 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g  331 (420)
                      |.++.+++.+.....+..++++++.|++.||+++|       +......................+ +............
T Consensus       257 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (366)
T TIGR00886       257 GLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGA-------RKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALF  329 (366)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccc-------hhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHH
Confidence            99999999988999999999999999999999975       333322222222222222222211 2222223333344


Q ss_pred             HHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhH
Q 014698          332 LALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPG  369 (420)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~  369 (420)
                      ...+.......... .+..|+++|++.|+.+...++|+
T Consensus       330 ~~~g~~~~~~~~~~-~~~~~~~~g~~~g~~~~~~~~g~  366 (366)
T TIGR00886       330 FFSGAGNGSTFALV-PHIFRRATGAVSGLVGAIGNLGG  366 (366)
T ss_pred             HHhccccchhhhcc-hhhchhhcccHHHHHHHhccCCC
Confidence            44443333333333 34446899999999999888763

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=99.95  E-value=5.5e-26  Score=211.58  Aligned_cols=334  Identities=16%  Similarity=0.105  Sum_probs=247.5

Q ss_pred             hhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHhccccchhhhHHHHHhcCC
Q 014698           43 YLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLA----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIP  118 (420)
Q Consensus        43 ~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~  118 (420)
                      ......+.++++|.+.||++|||+++.+.++..+.....+.+.    .+.+.+++.-++.|++.+...|..++++.|.+|
T Consensus        54 ~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~  133 (524)
T PF05977_consen   54 STLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVP  133 (524)
T ss_pred             HHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            3445556688899999999999999999988776655544322    467889999999999999999999999999999


Q ss_pred             ccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhh
Q 014698          119 LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSL  198 (420)
Q Consensus       119 ~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (420)
                      +++..+++++.+...++..++||.++|.+...+|-.+.|.+.++..++........++++++++..   .+.       .
T Consensus       134 ~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~~~~---~e~-------~  203 (524)
T PF05977_consen  134 KEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPPSSLP---RER-------F  203 (524)
T ss_pred             HhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc---hhh-------h
Confidence            999999999999999999999999999999988999999998876666544444444332211111   000       0


Q ss_pred             hhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhh
Q 014698          199 SASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAA  278 (420)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g  278 (420)
                      .+..        +..++.+.++|.+....+..++.+.........+|.+.++.+|.++...|++.+..+++.++|.++.+
T Consensus       204 ~~~l--------~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~  275 (524)
T PF05977_consen  204 FSAL--------REGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLP  275 (524)
T ss_pred             hhhH--------HHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence            0000        11134455677776666666666666666677899999999999999999999999999999999999


Q ss_pred             hhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHH
Q 014698          279 QFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILL  358 (420)
Q Consensus       279 ~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~  358 (420)
                      ++.+|++++         ..+..+.+..+.......... +.+...+.+++.|.+.........+..++..|++.||+++
T Consensus       276 ~l~~~~~~~---------~lv~~~~~~~a~~~~~lal~~-~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~  345 (524)
T PF05977_consen  276 RLRRRLSSR---------RLVLLASLLFALALLLLALSP-SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVF  345 (524)
T ss_pred             HhhcccCcc---------hhhHHHHHHHHHHHHHHhcch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHH
Confidence            998887753         222333333344444333332 2444455567778887776667777778889999999999


Q ss_pred             HHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHh
Q 014698          359 GITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVW  405 (420)
Q Consensus       359 g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (420)
                      +++++....+..+|..+.|.+.|.. +...++.+.++..+++.++..
T Consensus       346 si~~~~~~g~~~lGsll~G~la~~~-g~~~al~~a~~~lll~~~~~~  391 (524)
T PF05977_consen  346 SIYQMVFFGGMPLGSLLWGFLADHF-GVRTALLIAGAALLLSALIAL  391 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999987 566667666655555444443

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=99.95  E-value=8e-26  Score=207.62  Aligned_cols=333  Identities=13%  Similarity=0.094  Sum_probs=234.4

Q ss_pred             hhhhhccccccchhhh---hHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHH--hhchHHHHHHHHHHHHhccc
Q 014698           29 KKWVGLRIGRRGRIYL---KDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPL--LAGFMPGLVLSRVLVGIGEG  103 (420)
Q Consensus        29 ~~~l~~~~g~~~~l~~---~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l~G~~~~  103 (420)
                      .++++.+..+.+.+..   ....++++..+++.||+++||++..+..+++++..+...  ..++++.+++.|++.|+|.+
T Consensus        30 ~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g  109 (410)
T TIGR00885        30 QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLG  109 (410)
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHH
Confidence            4555555544444443   344455777778899999999999999999999887543  14679999999999999999


Q ss_pred             cchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhh--------------------------ccchhHHH
Q 014698          104 VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE--------------------------NLGWESVF  157 (420)
Q Consensus       104 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~--------------------------~~gwr~~f  157 (420)
                      ...+...+++.+..|+++|++.+++.+...++|..++|.+++.+..                          ..+||++|
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~f  189 (410)
T TIGR00885       110 FLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPY  189 (410)
T ss_pred             HHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999987742                          23699999


Q ss_pred             HHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHH
Q 014698          158 YIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGH  237 (420)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (420)
                      ++.+++.++..+...+.++++. ++++  + ++                 .....+.++++|+|+++...+..+++....
T Consensus       190 l~~a~~~~~~~~~~~~~~~p~~-~~~~--~-~~-----------------~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e  248 (410)
T TIGR00885       190 MIIGAVVLAVALLIMLTKMPAL-NHSD--A-KQ-----------------ISFSASLSRLARIRHYREGVIAQFFYVGVQ  248 (410)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCC-Cccc--c-cc-----------------ccchhhHHHHHhChhHHHHHHHHHHHHHHH
Confidence            9988877665444333322211 1100  0 00                 000012346788999998888888888888


Q ss_pred             HHHhhhhhhHhhhhh-CCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhc
Q 014698          238 YTCLSWLPTYFSEEL-SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID  316 (420)
Q Consensus       238 ~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (420)
                      ....++++.|.++.. +.+....+...+.......+|+++++++.||+++|        +. ...+.....+...+....
T Consensus       249 ~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~--------~~-l~i~~~~~~~~~ll~~~~  319 (410)
T TIGR00885       249 IMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAH--------KV-LMAYAIIGMALCLGSIFA  319 (410)
T ss_pred             HHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH--------HH-HHHHHHHHHHHHHHHHHc
Confidence            788889999997642 33444445555666677889999999999999863        33 333333333333333333


Q ss_pred             CCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC-----Cceeeeeh
Q 014698          317 LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST-----HSWSMSLF  391 (420)
Q Consensus       317 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-----~~~~~~~~  391 (420)
                      .+  ......+.+.+++.+...+.......+..+++.+..+.++....  +|+++.|.+.|.+.|..     |+++.+|+
T Consensus       320 ~~--~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~  395 (410)
T TIGR00885       320 GG--HVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMKEIAAAPAVNTSFI  395 (410)
T ss_pred             CC--hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHhcccccCccchHHH
Confidence            22  23355566778888878877777777777766654455554443  99999999999999953     45776776


Q ss_pred             hhhH
Q 014698          392 APSI  395 (420)
Q Consensus       392 ~~~~  395 (420)
                      +...
T Consensus       396 ~~~~  399 (410)
T TIGR00885       396 LPLL  399 (410)
T ss_pred             HHHH
Confidence            6433

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>TIGR00889 2A0110 nucleoside transporter

Probab=99.95  E-value=1.9e-25  Score=206.00  Aligned_cols=349  Identities=10%  Similarity=0.044  Sum_probs=231.3

Q ss_pred             hhhhccccccchh---hhhHHhHHhhhhcchhhhcc-hhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccc
Q 014698           30 KWVGLRIGRRGRI---YLKDTNLLELLRLPLLFVTW-IRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS  105 (420)
Q Consensus        30 ~~l~~~~g~~~~l---~~~~~~~~~l~~~p~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~  105 (420)
                      ++.+.+..+.+.+   ......+++...+.+.||.+ +|+++..+.++.++.+....+ .++++.+.+.|++.|++.+..
T Consensus        31 ~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~  109 (418)
T TIGR00889        31 KTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQ-VTTPAGMFPVLLANSLAYMPT  109 (418)
T ss_pred             HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHccH
Confidence            3344444444433   34444556777777799986 577888888888888877765 788999999999999987777


Q ss_pred             hhhhHHHHH--------hcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccC
Q 014698          106 PSAATDLIA--------RSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEG  177 (420)
Q Consensus       106 ~~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~  177 (420)
                      .+...+...        |......|.|..|      .+|.++||.+++.+....+|+ +|++.++..++..+..+.+||+
T Consensus       110 ~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~~~~~~e~  182 (418)
T TIGR00889       110 IALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVFALTLPDI  182 (418)
T ss_pred             HHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHHhcCCCC
Confidence            776655532        2222234555555      478899999998774443454 4556666555544455667776


Q ss_pred             cccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCc-
Q 014698          178 ETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNL-  256 (420)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-  256 (420)
                      ++.+++++.+ .             ++    ....+.++++|+|+++...+..++..........+.|.|+++. |.++ 
T Consensus       183 ~~~~~~~~~~-~-------------~~----~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~  243 (418)
T TIGR00889       183 PVAKSTAKMS-I-------------KV----MLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEF-GRNPE  243 (418)
T ss_pred             CCCccccccC-H-------------HH----HhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHh-ccccc
Confidence            4322111000 0             00    0011234677888888877777776666666667888888764 5543 


Q ss_pred             -------chhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCc---HHHHHH
Q 014698          257 -------TEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLP---HWEIVG  326 (420)
Q Consensus       257 -------~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  326 (420)
                             ...+...+...+..+++.+..+++.||+|+|         ..+..+.+...+...+........   ....+.
T Consensus       244 ~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r---------~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~  314 (418)
T TIGR00889       244 FADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK---------KVMLLSLVAWALRFGFFAYGDPEYFGYALLFLS  314 (418)
T ss_pred             ccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---------HHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHH
Confidence                   5568888889999999999999999999853         333344444444333333322111   223334


Q ss_pred             HHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHH-HhhhhhHHHHHHHHHHHhccCC-----ceeeeehhhhHHHHHH
Q 014698          327 ILTAGLALSSFALSGLYCTHQDISPEYASILLGITN-TVGAVPGIVGVALTGYLLDSTH-----SWSMSLFAPSIFFYLT  400 (420)
Q Consensus       327 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~~g~~~~~~~~g~l~~~~~-----~~~~~~~~~~~~~~~~  400 (420)
                      .++.|.+.+...+.....+.+..|+++|+++.|+.+ ....+|..++|.+.|.+.|+.+     +|+..|.+.+++.+++
T Consensus       315 ~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~  394 (418)
T TIGR00889       315 MIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAIL  394 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHH
Confidence            566677766555565666677889999999999997 5678999999999999999864     4777888887777777


Q ss_pred             HHHHhhhccCCCCC
Q 014698          401 GTIVWLAFASSKPQ  414 (420)
Q Consensus       401 ~~~~~~~~~~~~~~  414 (420)
                      +++.+++.++++++
T Consensus       395 ~~l~~~~~~~~~~~  408 (418)
T TIGR00889       395 AVLFMIFFKYSHNA  408 (418)
T ss_pred             HHHHHHHhCCcccC
Confidence            77777777766554

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=99.95  E-value=1.8e-25  Score=189.25  Aligned_cols=340  Identities=21%  Similarity=0.214  Sum_probs=259.1

Q ss_pred             hhhhhccccccchhhh---hHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccc
Q 014698           29 KKWVGLRIGRRGRIYL---KDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS  105 (420)
Q Consensus        29 ~~~l~~~~g~~~~l~~---~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~  105 (420)
                      .++++.+.+..+.+..   ..+...+.+..++..|++.+|.+..++++.+++..+-.. . +.+.++.+-.+.|.|.+..
T Consensus        39 r~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~-~-~~~~L~~gt~l~G~gIav~  116 (395)
T COG2807          39 RQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSL-G-GLPLLFLGTLLAGAGIAVI  116 (395)
T ss_pred             HHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhc-c-cHHHHHHHHHHHHhhHHHH
Confidence            4444444433333333   333344777777788999999999999999999998764 3 6788999999999999999


Q ss_pred             hhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhcc-chhHHHHHHHHHHHHHHHHhhhcccCcccCCCC
Q 014698          106 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIFGLLGIAWFSGFKILQEGETSNGAT  184 (420)
Q Consensus       106 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (420)
                      .+..+..+.+.+| |+-+..+|+|....++|..+++.+...+.++. |||......+.++++.++.++--.  .+++..+
T Consensus       117 nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~--~r~~~~~  193 (395)
T COG2807         117 NVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQA--LREQAAS  193 (395)
T ss_pred             HHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhc--ccccccc
Confidence            9999999999998 77899999999999999999999999998877 799999999999988776655432  1111110


Q ss_pred             cCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHH
Q 014698          185 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI  264 (420)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  264 (420)
                      .                      +.+..+-..++|||..|...+.+.++++.+|....|+|.++.|+ |+|+.++|.+.+
T Consensus       194 ~----------------------~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~-G~sa~~aG~lls  250 (395)
T COG2807         194 I----------------------ATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDR-GLSAAEAGSLLS  250 (395)
T ss_pred             c----------------------ccccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHc-CCCHHHhhhHHH
Confidence            0                      00111124689999999999999999999999999999999996 999999999999


Q ss_pred             hhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhh
Q 014698          265 LPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYC  344 (420)
Q Consensus       265 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  344 (420)
                      ...+..++.++....+.+|..++       |...........+..+-+. +.+.+.++..  .++.|++.+...+.....
T Consensus       251 l~~l~~~~~~ll~P~la~R~~n~-------r~~~~~~~~~~l~G~~G~~-~~P~~~~~lw--~~llG~G~G~~F~laL~l  320 (395)
T COG2807         251 LMQLAQLPTALLIPLLARRSKNQ-------RPLVVLALLLMLVGLVGLL-LAPGQLPILW--ALLLGLGQGGAFPLALTL  320 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccc-------chHHHHHHHHHHHHHHHHH-HhhhhHHHHH--HHHHhCccchHHHHHHHH
Confidence            99999999999999999996654       3333333332222222222 2233233333  467788888777777777


Q ss_pred             hhhcc-CccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhh
Q 014698          345 THQDI-SPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWL  406 (420)
Q Consensus       345 ~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (420)
                      +.... .+++.++-.|+.+.++++-.+.||.+.|++.|..|+|+..+...+...+...+.-+.
T Consensus       321 i~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~  383 (395)
T COG2807         321 ILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLR  383 (395)
T ss_pred             HHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhh
Confidence            66654 568889999999999999999999999999999999998887766655444444333

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=99.95  E-value=2.5e-25  Score=231.83  Aligned_cols=317  Identities=16%  Similarity=0.077  Sum_probs=227.4

Q ss_pred             hhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHH--hhchHHHHHHHHHHHHhccccchhhhHHHHHhcCC
Q 014698           41 RIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPL--LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIP  118 (420)
Q Consensus        41 ~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~  118 (420)
                      .++.....+++++.|++.||++|||+++.+.++..+..++..+  ..++++.+++.|+++|++.+...+...+++.|++|
T Consensus        54 ~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~  133 (1146)
T PRK08633         54 ALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVG  133 (1146)
T ss_pred             HHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcC
Confidence            3444455667888899999999999999888766555544332  25789999999999999999999999999999999


Q ss_pred             ccccchhhHHHHhhhhhHHHHHHhhHHHhhhc--------c-chhHHHHHHHHHH-HHHHHHhhhcccCcccCCCCcCcc
Q 014698          119 LEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN--------L-GWESVFYIFGLLG-IAWFSGFKILQEGETSNGATLAPR  188 (420)
Q Consensus       119 ~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~--------~-gwr~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  188 (420)
                      +++|++++++...+.++|.++|+.+++++.+.        + +|++.+.+..+.. ++.++..+.+|+.++...... +.
T Consensus       134 ~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  212 (1146)
T PRK08633        134 KENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVF-DK  212 (1146)
T ss_pred             cccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccc-cc
Confidence            99999999999999999999999999999876        2 3444444444333 333444555666554322211 00


Q ss_pred             chhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcc-hhhHHHHhhH
Q 014698          189 SNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLT-EAAWVSILPP  267 (420)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~  267 (420)
                      +..    ..    .+     .....++.++++|.++...+..++..........++|.|+++.+|.+.. +.+++.+...
T Consensus       213 ~~~----~~----~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~  279 (1146)
T PRK08633        213 KKY----LF----PK-----LLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASA  279 (1146)
T ss_pred             ccc----cc----HH-----HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHH
Confidence            000    00    00     0011245678888888887777777777777788999999998999998 8999999999


Q ss_pred             HHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhh
Q 014698          268 LASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQ  347 (420)
Q Consensus       268 ~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  347 (420)
                      ++.+++.++.+++.||+++++        . ...+.+..+++........ +.....+..++.|++.+...........+
T Consensus       280 ig~~~g~~~~g~l~~r~~~~~--------~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  349 (1146)
T PRK08633        280 IGIGIGSLLAGRLSGRHIELG--------L-VPLGALGLALSLFLLPTAP-SLASVLVLFFLFGFSAGLFIVPLNALIQF  349 (1146)
T ss_pred             HHHHHHHHHHHHHhCCceEcc--------c-hhHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHhhHHHHHHHhh
Confidence            999999999999999988642        1 2222222222222222222 23444455677777777666666667777


Q ss_pred             ccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc
Q 014698          348 DISPEYASILLGITNTVGAVPGIVGVALTGYLLD  381 (420)
Q Consensus       348 ~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~  381 (420)
                      ..|++.||+++|+.+++..++..+++.+.+.+..
T Consensus       350 ~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~  383 (1146)
T PRK08633        350 RAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG  383 (1146)
T ss_pred             cCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7899999999999999999999888877776654

>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.94  E-value=1.9e-26  Score=196.74  Aligned_cols=343  Identities=13%  Similarity=0.127  Sum_probs=253.8

Q ss_pred             hccccccchhhhhHHhH---HhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhh
Q 014698           33 GLRIGRRGRIYLKDTNL---LELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAA  109 (420)
Q Consensus        33 ~~~~g~~~~l~~~~~~~---~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~  109 (420)
                      .+...+.+.++......   ...+.|++.||.++|-.+++|+.+....+++.++ .++++.++++|.+||+|.+......
T Consensus       102 ~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFaf-g~sy~~l~vAR~LQgvgsA~~~tsg  180 (464)
T KOG3764|consen  102 DRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAF-GNSYPMLFVARSLQGVGSAFADTSG  180 (464)
T ss_pred             cccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHH-cchhHHHHHHHHHhhhhHHHHHhhh
Confidence            33444555554443333   2445556689999999999999999999999997 9999999999999999999999999


Q ss_pred             HHHHHhcCCcc-ccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCcc
Q 014698          110 TDLIARSIPLE-ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPR  188 (420)
Q Consensus       110 ~~~i~~~~~~~-~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (420)
                      .++++|.+|++ +|++++|+...+.++|..+||++||.+.+..|.+.+|.+.++++++...+.+++.|+.+.++..    
T Consensus       181 lamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~----  256 (464)
T KOG3764|consen  181 LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDS----  256 (464)
T ss_pred             HHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCccc----
Confidence            99999999875 5899999999999999999999999999999999999999999999776666666554332211    


Q ss_pred             chhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHH
Q 014698          189 SNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPL  268 (420)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  268 (420)
                                         ..+..++++++++|..+.........+.........++.+..|.+..+..+.|..+....+
T Consensus       257 -------------------~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~  317 (464)
T KOG3764|consen  257 -------------------TEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASL  317 (464)
T ss_pred             -------------------cccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeeccccc
Confidence                               1122346789999999988877777777777777888998888888666699999999999


Q ss_pred             HHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhh---hhhhhhhh
Q 014698          269 ASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSF---ALSGLYCT  345 (420)
Q Consensus       269 ~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~  345 (420)
                      ...++..+.|.+.||+++.       |......+......+........+... .++.....+++.+..   ..+.....
T Consensus       318 ~y~ig~~lfg~la~k~~~~-------~wl~~~~gl~~~G~~~~~iP~~~~~~~-L~vp~~~l~~~i~~~dasl~P~l~~l  389 (464)
T KOG3764|consen  318 SYAIGTNLFGKLADKYPHL-------RWLLSLGGLATVGVSSGPIPFATSIAQ-LWVPNFGLGFGIGLADASLIPTLGYL  389 (464)
T ss_pred             chhccCchHHHHHHhcCch-------hHHHHHHHHHHHHHHhchhHhhhhHHH-HhhhhHHHHHHHHHHHHHHhhhhHHh
Confidence            9999999999999999865       545545555544444433333322111 222222222222222   22222222


Q ss_pred             hhccCcc---chHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhc
Q 014698          346 HQDISPE---YASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAF  408 (420)
Q Consensus       346 ~~~~~~~---~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (420)
                      .+....+   ..|...++......+|.++||.++|.+.+.. ++.+.....++..++-+-++..++
T Consensus       390 vd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~i-GF~wl~~iig~~n~iyapvl~ll~  454 (464)
T KOG3764|consen  390 VDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAI-GFEWLMTIIGILNLIYAPVLLLLR  454 (464)
T ss_pred             cchhhccccceeeeHHHHHHHHHHHhhhccccccchheeeh-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2222222   5789999999999999999999999999997 677766666666666555544443

>TIGR00901 2A0125 AmpG-related permease

Probab=99.94  E-value=1.3e-24  Score=197.48  Aligned_cols=287  Identities=13%  Similarity=0.079  Sum_probs=204.8

Q ss_pred             hhhhcchhhhc-----chhHH-HHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHhccccchhhhHHHHHhcCCcccc
Q 014698           51 ELLRLPLLFVT-----WIRKV-LQTGVLIWSLATALLPLLA--GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER  122 (420)
Q Consensus        51 ~l~~~p~~~~~-----~~r~~-~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r  122 (420)
                      .++.+|+.||+     ||||. ++.+.+..++.....++..  .+.+.+....++.+.+.+...+...+++.|++|+|+|
T Consensus        38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r  117 (356)
T TIGR00901        38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEEL  117 (356)
T ss_pred             HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhh
Confidence            88899999998     67775 5667777777766665522  4566677788888888888899999999999999999


Q ss_pred             chhhHHHHhhhhhHHHHHHhhHHHhhhccc--------hhHHHHHHHHHHHHHHHHhhh-cccCcccCCCCcCccchhhh
Q 014698          123 SRAVSFVFGGLSFGSVAGLLLAPPIIENLG--------WESVFYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYIN  193 (420)
Q Consensus       123 ~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g--------wr~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  193 (420)
                      +++.++...+.++|.++++.+++.+.+..|        ||..|++.++..++..+..++ .||++++ ++++  ++.   
T Consensus       118 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~-~~~~--~~~---  191 (356)
T TIGR00901       118 GYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQED-ASVP--KPL---  191 (356)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCcc-cccc--hhH---
Confidence            999999999999999999999999988888        999999998877765544443 3443221 1100  000   


Q ss_pred             hhhhhhhhhhhhcccccccchhhhhhcHH---HHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhH-HH
Q 014698          194 MKKSLSASLEEMGESLKDVPWKAIFRSKA---VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPP-LA  269 (420)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~  269 (420)
                       +++            .+.++++++++|.   ++...+..++.....+....+.|.|+++ +|+++.+.+......+ +.
T Consensus       192 -~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~  257 (356)
T TIGR00901       192 -TQA------------VLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLG  257 (356)
T ss_pred             -HHH------------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHH
Confidence             000            0112456666664   6766667777778888888999999988 7999999998887666 57


Q ss_pred             HHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHH-hh--cC-------CCcHHHHHHHHHHHHHhhhhhh
Q 014698          270 SVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS-SI--DL-------GLPHWEIVGILTAGLALSSFAL  339 (420)
Q Consensus       270 ~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~-------~~~~~~~~~~~~~g~~~~~~~~  339 (420)
                      .+++.++++++.||+++|       + ...... +...+..... ..  ..       ++........++.+++.+...+
T Consensus       258 ~~~g~~~~g~l~~r~g~~-------~-~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  328 (356)
T TIGR00901       258 AILGGLIGGIIMQPLNIL-------Y-ALLLFG-IVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTV  328 (356)
T ss_pred             HHHHHHHHHHHHhhhhHH-------H-HHHHHH-HHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHH
Confidence            789999999999999964       2 222222 2222222221 11  11       1122333344556777777777


Q ss_pred             hhhhhhhhccCccchHHHHHHHHHhhh
Q 014698          340 SGLYCTHQDISPEYASILLGITNTVGA  366 (420)
Q Consensus       340 ~~~~~~~~~~~~~~~g~~~g~~~~~~~  366 (420)
                      .......+..|+++||+..|+.++..+
T Consensus       329 ~~~~~~~~~~p~~~~g~~~g~~~~~~~  355 (356)
T TIGR00901       329 AFVAFLSKLSNPKFGATQMALLSSLSA  355 (356)
T ss_pred             HHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence            777888888999999999999887654

>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=99.94  E-value=8.9e-25  Score=185.51  Aligned_cols=347  Identities=14%  Similarity=0.045  Sum_probs=222.3

Q ss_pred             cccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhc
Q 014698           37 GRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS  116 (420)
Q Consensus        37 g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~  116 (420)
                      |-.+..++....+.+...|-+.|++|||++++++++..++...+.+. ++|+..+.+.|++.|+.-+-. ....++++|.
T Consensus        71 GflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~-S~~F~afv~aR~l~Gi~kgnl-~v~rAiisdV  148 (451)
T KOG2615|consen   71 GFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWAL-SRNFAAFVLARFLGGIFKGNL-SVIRAIISDV  148 (451)
T ss_pred             hhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhhccCch-HHHHHHHHhh
Confidence            33344444444445666666699999999999999999998888886 999977777799999996655 4568999999


Q ss_pred             CCccccchhhHHHHhhhhhHHHHHHhhHHHhhh---ccchhHHHHH----HHHHHHH-HHHHhhhcccCcccCCCCcCcc
Q 014698          117 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE---NLGWESVFYI----FGLLGIA-WFSGFKILQEGETSNGATLAPR  188 (420)
Q Consensus       117 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~---~~gwr~~f~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  188 (420)
                      +++|+|++.++.....+++|.++||.+|+++.+   ..| +.+|..    ..++... .....+++||+-+.+++.  ++
T Consensus       149 ~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~--~~  225 (451)
T KOG2615|consen  149 VSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKRN--DE  225 (451)
T ss_pred             cChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCccccchhhc--cc
Confidence            999999999999999999999999999999988   222 222322    2222222 345678889986654443  11


Q ss_pred             chhhhhhhhhhhhhhhhcccccccchhhhhhcHH-------HHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhH
Q 014698          189 SNYINMKKSLSASLEEMGESLKDVPWKAIFRSKA-------VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAW  261 (420)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  261 (420)
                      ..+..+..+.+.   +..+. ....-...+||++       .....+..+.+...+.....+.+.+-++.+|+++.+.|.
T Consensus       226 ~~~~~~~~~~~~---~~~~~-~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~  301 (451)
T KOG2615|consen  226 HSTLQEAADDRL---ALLKF-ARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGK  301 (451)
T ss_pred             ccchhhhhhhhh---hhcch-hhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhhee
Confidence            110100011000   00000 0000011222221       223344555555555555555555656788999999999


Q ss_pred             HHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhh
Q 014698          262 VSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSG  341 (420)
Q Consensus       262 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  341 (420)
                      +.+..++...+.+....+..||.+..       .+...........-.+++..... .+........+..+......+..
T Consensus       302 vl~~tGl~m~~~ql~~~~~l~~~~~~-------~~a~l~~~l~~~vP~~llls~~~-~~~~l~~~s~l~sf~~A~~vt~L  373 (451)
T KOG2615|consen  302 VLSTTGLLMLVIQLALVPILPRYKGN-------IKAVLLFSLLLIVPAFLLLSLAR-TPVVLYLGSTLKSFSTASVVTCL  373 (451)
T ss_pred             eeehhhHHHHHHHHhccccccccccc-------hhhHHHHHHHHHHHHHHHHhccc-cchhhhHHHHHHHHHHHHhhHHH
Confidence            99888888888777766666765421       12222222222222223332222 23444555555556555455555


Q ss_pred             hhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHH
Q 014698          342 LYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLT  400 (420)
Q Consensus       342 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~  400 (420)
                      ........|+++||+++|+..+...++.++||.+.|.+..+..+-+.++..-+...++.
T Consensus       374 t~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~~~L~~~~  432 (451)
T KOG2615|consen  374 TSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAWGALLLIP  432 (451)
T ss_pred             HHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeehHHHHHHH
Confidence            55555667889999999999999999999999999999987655665665544444433

>TIGR00805 oat sodium-independent organic anion transporter

Probab=99.94  E-value=8.3e-26  Score=216.82  Aligned_cols=252  Identities=17%  Similarity=0.142  Sum_probs=191.4

Q ss_pred             cccccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhc----------------------------
Q 014698           35 RIGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAG----------------------------   86 (420)
Q Consensus        35 ~~g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~----------------------------   86 (420)
                      ..|.....+.....++.++.+.++||++|||++.++.+++++++++.+. ++                            
T Consensus        69 ~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~al-phf~~~~y~~~~~~~~~~~~~~~~~~~c~~  147 (633)
T TIGR00805        69 SSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSL-PHFLSGRYSYSTTVSSTGNLSSANSFLCME  147 (633)
T ss_pred             cceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhC-hHHhcCCccccccccccccccccccccccC
Confidence            3444555555556666777778899999999999999999999998864 42                            


Q ss_pred             -----------------------hHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhh
Q 014698           87 -----------------------FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLL  143 (420)
Q Consensus        87 -----------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l  143 (420)
                                             .+..++++|+++|+|.+..++...+++.|++|+++|++++++...+..+|.++|+++
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~ll  227 (633)
T TIGR00805       148 NLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLL  227 (633)
T ss_pred             CCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHH
Confidence                                   245678999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhcc----------------------chhHHHHHHHHHHHHHHHHhhhcccCcccCCCCc-Cccchhhhhhhhhhh
Q 014698          144 APPIIENL----------------------GWESVFYIFGLLGIAWFSGFKILQEGETSNGATL-APRSNYINMKKSLSA  200 (420)
Q Consensus       144 ~~~l~~~~----------------------gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  200 (420)
                      ++++.+.+                      +||..|++.+++.++..+.++++|++.|+..++. .+.++....++...+
T Consensus       228 gg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~  307 (633)
T TIGR00805       228 GSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRVNVDVHETEKLEKSEDK  307 (633)
T ss_pred             HHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCcccccchhhhhhhcccccccc
Confidence            99988643                      2778899988888876666777887655332111 010000000000000


Q ss_pred             hhhh--hcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHH-HHHHHHHhh
Q 014698          201 SLEE--MGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPL-ASVLVTSIA  277 (420)
Q Consensus       201 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~  277 (420)
                      ...+  ...+.....++++++||.++...+..++.....+++..++|.|+++++|+++.+++++.....+ +.+++.+++
T Consensus       308 ~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~  387 (633)
T TIGR00805       308 SRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIG  387 (633)
T ss_pred             cchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhh
Confidence            0000  0000112346789999999999999999999999999999999999999999999999887776 567899999


Q ss_pred             hhhhhhhhhc
Q 014698          278 AQFADNLIAT  287 (420)
Q Consensus       278 g~l~dr~~~~  287 (420)
                      |+++||++.+
T Consensus       388 G~l~~r~~~~  397 (633)
T TIGR00805       388 GFIMKKFKLN  397 (633)
T ss_pred             hheeeeeccc
Confidence            9999999854

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.94  E-value=5.6e-25  Score=204.13  Aligned_cols=339  Identities=11%  Similarity=0.012  Sum_probs=210.5

Q ss_pred             hhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh--hc-----hHHHHHHHHHHHHhccccchhhhHHHHHhc
Q 014698           44 LKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL--AG-----FMPGLVLSRVLVGIGEGVSPSAATDLIARS  116 (420)
Q Consensus        44 ~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~--~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~  116 (420)
                      .....+.+.+.+.+.||++|||++..+..+..++.......  ++     ........++..|.+.....+....+..+.
T Consensus        56 ~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (420)
T PRK09528         56 SLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERV  135 (420)
T ss_pred             HHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHH
Confidence            33444457777777999999999988766655443321110  11     111123334444444333333333333222


Q ss_pred             CCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhh
Q 014698          117 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKK  196 (420)
Q Consensus       117 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (420)
                        ++++++.++......++|..++|++++.+.+. +|+..|++.++..++..+..++.+++++++.+.+++ ++.    +
T Consensus       136 --~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~  207 (420)
T PRK09528        136 --SRRSGFEYGRARMWGSLGWALCAFIAGILFNI-NPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANA-LGA----N  207 (420)
T ss_pred             --HhhccccchhhHHhhhHHHHHHHHHHHHHHhc-CchHhHHHHHHHHHHHHHHHhcccccccchhhhccc-hhc----c
Confidence              35678888999999999999999999988764 899999998888777665555554443322111000 000    0


Q ss_pred             hhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhh---CCCcchhhHHHHhhHHHHHHH
Q 014698          197 SLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEEL---SLNLTEAAWVSILPPLASVLV  273 (420)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~  273 (420)
                               +++.+..+.++.+|||+++...+........+.....+.|.|+.+.+   +.+..+.+.+.+...+...++
T Consensus       208 ---------~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  278 (420)
T PRK09528        208 ---------ASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALI  278 (420)
T ss_pred             ---------cccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHH
Confidence                     00011122446778888776665555554555555556777776543   455567788888888899999


Q ss_pred             HHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccc
Q 014698          274 TSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEY  353 (420)
Q Consensus       274 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  353 (420)
                      .++.|++.||+++|       + . ...+.....+...+..... +.........+.+...+...........+..|++.
T Consensus       279 ~~~~g~l~dr~g~~-------~-~-~~~~~~l~~~~~~l~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~  348 (420)
T PRK09528        279 MFFAPFIINRIGAK-------N-A-LLLAGTIMAVRIIGSGFAT-GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL  348 (420)
T ss_pred             HHHHHHHHHHhCcc-------h-h-hHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc
Confidence            99999999999975       2 2 2222333333333333322 23434444455566555444555555667788888


Q ss_pred             hHHHHHH-HHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccC
Q 014698          354 ASILLGI-TNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFAS  410 (420)
Q Consensus       354 ~g~~~g~-~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (420)
                      +++..+. .++...+|.+++|.+.|.+.|.. +++..|...+++.++..++.+...++
T Consensus       349 ~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~-G~~~~f~~~~~~~~i~~~~~~~~~~~  405 (420)
T PRK09528        349 SATIYLVGFQFAKQLGAVFLSTLAGNLYDSI-GFQGTYLILGGIVLLFTLISVFTLSG  405 (420)
T ss_pred             eeeeeeehHHHHHHHHHHHHHHHHHHHHHhh-CchHHHHHHHHHHHHHHHHHHHHhcC
Confidence            8888765 57778899999999999999986 68888888777666655555544443

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.94  E-value=2.4e-23  Score=194.69  Aligned_cols=354  Identities=13%  Similarity=0.108  Sum_probs=224.6

Q ss_pred             Hhhhhcchhhh-cchhHHHHHHHHHHHHHHHHHHHhhchHHH-HHHHHHHHHhccccchhhhHHHHHhcCCcc--ccchh
Q 014698           50 LELLRLPLLFV-TWIRKVLQTGVLIWSLATALLPLLAGFMPG-LVLSRVLVGIGEGVSPSAATDLIARSIPLE--ERSRA  125 (420)
Q Consensus        50 ~~l~~~p~~~~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~  125 (420)
                      ..++++.+.|| .||||++..+.+++.++++.+++ +++... +.++|+++|+|.|...|...++++|.+|++  +|+++
T Consensus        66 ~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~-~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~  144 (489)
T PRK10207         66 LISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGM-SLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGA  144 (489)
T ss_pred             HHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHH-hccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcc
Confidence            35678888999 89999999999999999999876 655444 558999999999999999999999999877  45789


Q ss_pred             hHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccC---C-CCcCccchhhh--------
Q 014698          126 VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSN---G-ATLAPRSNYIN--------  193 (420)
Q Consensus       126 ~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~--------  193 (420)
                      +++++.+.++|..+||.+++++.+++|||+.|++.++..++..+.+...++..++.   . +++.|......        
T Consensus       145 ~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~  224 (489)
T PRK10207        145 FTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVM  224 (489)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHH
Confidence            99999999999999999999999999999999997553333333333333221111   1 11111111000        


Q ss_pred             -------hhhhhhhhhh--h---------hcccccccchhhhhhcHHHHHHHHH--HHHhHHHHHHHhhhhhhHhhhhhC
Q 014698          194 -------MKKSLSASLE--E---------MGESLKDVPWKAIFRSKAVWAMIYA--HFCGSWGHYTCLSWLPTYFSEELS  253 (420)
Q Consensus       194 -------~~~~~~~~~~--~---------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g  253 (420)
                             .+........  .         ..++.+   ..+++|+|.+....+.  ..+....+....+.++.+.++..+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~---~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~  301 (489)
T PRK10207        225 IFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFK---LDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVH  301 (489)
T ss_pred             HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhcc
Confidence                   0000000000  0         000000   1145666665544322  344445555555778888875322


Q ss_pred             CCc----chhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHH------Hhh-c-CC-Cc
Q 014698          254 LNL----TEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTL------SSI-D-LG-LP  320 (420)
Q Consensus       254 ~~~----~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-~-~~-~~  320 (420)
                      .+.    .....+.+...+..++..++.+++.||+++|+.......+...  ++++.++++..      ... . .. +.
T Consensus       302 ~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~--G~~l~~~~~~~~~~~~~~~~~~~~~~s~  379 (489)
T PRK10207        302 HEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTL--GMFLCSLGFLTAAAAGMWFADAQGLTSP  379 (489)
T ss_pred             ccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHH--HHHHHHHHHHHHHHHHHhhcCCCCccCH
Confidence            211    1223444555566777888889999999987543333233332  22222222211      111 1 11 23


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc---------CCceeeeeh
Q 014698          321 HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS---------THSWSMSLF  391 (420)
Q Consensus       321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~---------~~~~~~~~~  391 (420)
                      ++.....++.+++.....++....+.+..|++.+|.++|+.+...++|+.++..+.......         .+.+...|.
T Consensus       380 ~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~  459 (489)
T PRK10207        380 WFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFG  459 (489)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHH
Confidence            44555668889999988888888888999999999999999999999999998887655210         112445566


Q ss_pred             hhhHHHHHHHHHHhhhcc
Q 014698          392 APSIFFYLTGTIVWLAFA  409 (420)
Q Consensus       392 ~~~~~~~~~~~~~~~~~~  409 (420)
                      ..++..++++++.+...+
T Consensus       460 ~~~~~~~~~~v~~~~~~~  477 (489)
T PRK10207        460 KIGLVTLGVAVVMALMVP  477 (489)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            666656555555555444

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.94  E-value=1.6e-23  Score=195.82  Aligned_cols=360  Identities=14%  Similarity=0.068  Sum_probs=236.8

Q ss_pred             HHhHHhhhhcchhhh-cchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccc---
Q 014698           46 DTNLLELLRLPLLFV-TWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE---  121 (420)
Q Consensus        46 ~~~~~~l~~~p~~~~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~---  121 (420)
                      ...++.++++.+.|| .||||++..+..+.+++.++.++ +++++.+.+.|.+.|+|.|...|...++++|++|+++   
T Consensus        60 ~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~-~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~  138 (475)
T TIGR00924        60 LVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAM-SIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPR  138 (475)
T ss_pred             HHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHh-cccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCccc
Confidence            344457778888999 79999999999999999988876 7888889999999999999999999999999998754   


Q ss_pred             cchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcC--ccchhhhhhhh--
Q 014698          122 RSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLA--PRSNYINMKKS--  197 (420)
Q Consensus       122 r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--  197 (420)
                      |++++++.+.+.++|.++||.+++++.+.+|||+.|.+.++..++..+.....++..++.++++.  ++++.......  
T Consensus       139 r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (475)
T TIGR00924       139 RDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLA  218 (475)
T ss_pred             ccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHH
Confidence            88899999999999999999999999998999999999886555544444443332211111110  00000000000  


Q ss_pred             ------------hh--hh-hh---------------hhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhH
Q 014698          198 ------------LS--AS-LE---------------EMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTY  247 (420)
Q Consensus       198 ------------~~--~~-~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (420)
                                  +.  +. ..               +.....++....+-.|.+.+..+.+...+.+..+....+.++.+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~  298 (475)
T TIGR00924       219 LLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFF  298 (475)
T ss_pred             HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence                        00  00 00               00000001111111222344445555556666666777778888


Q ss_pred             hhhhhCCCcch----hhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhh--------
Q 014698          248 FSEELSLNLTE----AAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI--------  315 (420)
Q Consensus       248 ~~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  315 (420)
                      .++..+.+...    .+++.+...+..++.+++..++..|..+|+.......|  +..+.++.++++.....        
T Consensus       299 ~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k--~~~G~~l~~~~~~~~~~~~~~~~~~  376 (475)
T TIGR00924       299 ADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLK--FTLGMLFCGASFLTFAASIWFADAG  376 (475)
T ss_pred             HHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHH--HHHHHHHHHHHHHHHHHHHhhcCCC
Confidence            77654443222    66788888888888887766655566554221111112  23334433333333221        


Q ss_pred             cCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhH
Q 014698          316 DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSI  395 (420)
Q Consensus       316 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~  395 (420)
                      ...+.++.+...++.+++.....+.......+..|++.||+.+|+......+|..+++.+.....+.. ++...|...++
T Consensus       377 ~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~-~~~~~~~~~~~  455 (475)
T TIGR00924       377 GLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQ-GVTGVFGKIGL  455 (475)
T ss_pred             CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-chhhHHHHHHH
Confidence            12345566777788899999888888888888899999999999999999999999999888776663 56656666666


Q ss_pred             HHHHHHHHHhhhcc
Q 014698          396 FFYLTGTIVWLAFA  409 (420)
Q Consensus       396 ~~~~~~~~~~~~~~  409 (420)
                      .+++.+++.+...+
T Consensus       456 ~~~~~~~~~~~~~~  469 (475)
T TIGR00924       456 VTLLVGVVMALMVP  469 (475)
T ss_pred             HHHHHHHHHHHHHH
Confidence            66655555554444

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]

Probab=99.93  E-value=1.6e-23  Score=176.82  Aligned_cols=354  Identities=14%  Similarity=0.085  Sum_probs=245.8

Q ss_pred             HHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchh
Q 014698           46 DTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA  125 (420)
Q Consensus        46 ~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~  125 (420)
                      ...+++-.++...|+.|||+.+.+......+...+.++ ++|+..+++.|.+.|+|.|+ .|...++-.|..|..+|...
T Consensus       125 gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~-spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~  202 (528)
T KOG0253|consen  125 GMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGA-SPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLL  202 (528)
T ss_pred             hhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcC-CCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcc
Confidence            33455777777799999999999999999999988886 99999999999999999999 88888999999999999988


Q ss_pred             hHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhh---------
Q 014698          126 VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKK---------  196 (420)
Q Consensus       126 ~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  196 (420)
                      +-.. ..+.+|.+....+.-....++||||.....+.+..+.....+++||+++..-.+.++.++....++         
T Consensus       203 ~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~ql  281 (528)
T KOG0253|consen  203 TVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQL  281 (528)
T ss_pred             hhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCC
Confidence            7777 999999999999999999999999999999988888888899999998865444333322110000         


Q ss_pred             --------------hhhhhhhhhc---ccccccchhhhhh---cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhh----
Q 014698          197 --------------SLSASLEEMG---ESLKDVPWKAIFR---SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEEL----  252 (420)
Q Consensus       197 --------------~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  252 (420)
                                    .......+.+   .+.......+++.   .+....+....+...+.+|+.........+...    
T Consensus       282 plgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~  361 (528)
T KOG0253|consen  282 PLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPL  361 (528)
T ss_pred             CcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCcccc
Confidence                          0000000000   1111112233332   123334444555566666665554444444321    


Q ss_pred             ---------------CCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcC
Q 014698          253 ---------------SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDL  317 (420)
Q Consensus       253 ---------------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (420)
                                     ..+...--.=.....+....|.++.+++.||+||         |..+..++++..++.+......
T Consensus       362 ~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGR---------KkTMal~l~~f~iflfll~~c~  432 (528)
T KOG0253|consen  362 YNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGR---------KKTMALSLILFGIFLFLLTTCK  432 (528)
T ss_pred             chhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcc---------hhHHHHHHHHHHHHHHHHHHhc
Confidence                           0111111112345567888999999999999995         4555666666666655555444


Q ss_pred             CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHH
Q 014698          318 GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFF  397 (420)
Q Consensus       318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~  397 (420)
                      +.+. ..+..+..-++..+.....+....+.+|+..|+++.|..+.+..+|+++.|.+. ...+.  +...+..+.+.++
T Consensus       433 ~rn~-~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~--s~sl~i~vy~~~~  508 (528)
T KOG0253|consen  433 TRNA-YTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAEL--STSLPIFVYGALF  508 (528)
T ss_pred             Ccch-hHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhcc--ceeehHHHHHHHH
Confidence            4332 333344445555555666666677778999999999999999999999999988 33333  5666777888888


Q ss_pred             HHHHHHHhhhccCCCCCC
Q 014698          398 YLTGTIVWLAFASSKPQN  415 (420)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~  415 (420)
                      +++++...++..++|.+.
T Consensus       509 ilagIavcffPiEtkGR~  526 (528)
T KOG0253|consen  509 ILAGIAVCFFPIETKGRS  526 (528)
T ss_pred             HHHHHHheeeeeccCCCC
Confidence            888888888888888765

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.93  E-value=1.2e-23  Score=193.84  Aligned_cols=333  Identities=11%  Similarity=0.022  Sum_probs=217.5

Q ss_pred             hhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh--h-----chHHHHHHHHHHHHhccccchhhhHHHHHhc
Q 014698           44 LKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL--A-----GFMPGLVLSRVLVGIGEGVSPSAATDLIARS  116 (420)
Q Consensus        44 ~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~--~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~  116 (420)
                      .....+.+...+.+.||++|||+++.+.....++.......  .     +....+++.|++.|++.+...+....+..|.
T Consensus        48 ~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  127 (396)
T TIGR00882        48 SLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKV  127 (396)
T ss_pred             HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHh
Confidence            33444456777777999999999988777665544322110  1     2233456778999999888888888888775


Q ss_pred             CCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhh
Q 014698          117 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKK  196 (420)
Q Consensus       117 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (420)
                      .  +++++..+......++|.++||.+++.+.+ .+||..|++.++..++..+..+..+++++++++++ +..+      
T Consensus       128 ~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------  197 (396)
T TIGR00882       128 S--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKAPSSATVA-NALG------  197 (396)
T ss_pred             h--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhh-cccc------
Confidence            3  334567788888899999999999998765 49999999988887776544444444332211110 0000      


Q ss_pred             hhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhh---CCCcchhhHHHHhhHHHHHHH
Q 014698          197 SLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEEL---SLNLTEAAWVSILPPLASVLV  273 (420)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~  273 (420)
                             +..++.+..+.++++|||+++...+..+.....+.....+.|.|+++.+   +.+....|...+...+...++
T Consensus       198 -------~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~  270 (396)
T TIGR00882       198 -------ANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALI  270 (396)
T ss_pred             -------cccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHH
Confidence                   0001111223568889999887776666655556666667888887754   455566788888888888999


Q ss_pred             HHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccc
Q 014698          274 TSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEY  353 (420)
Q Consensus       274 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  353 (420)
                      ....+++.||+++|       + . ...+....++........ ++.+......++.+.+.............+..+++.
T Consensus       271 ~~~~g~l~~r~g~~-------~-~-l~~~~~l~~l~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~  340 (396)
T TIGR00882       271 MFCAPLIINRIGAK-------N-A-LLIAGTIMSVRIIGSSFA-TTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL  340 (396)
T ss_pred             HHHHHHHHHHhccc-------h-h-HHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce
Confidence            99999999999975       2 2 223333333333332222 234444444455555544333333333445567777


Q ss_pred             hHHHHHH-HHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHH
Q 014698          354 ASILLGI-TNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIV  404 (420)
Q Consensus       354 ~g~~~g~-~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~  404 (420)
                      ++++.+. .+....+|+.++|.+.|++.|.. +++.+|.+.+++.++.+.+.
T Consensus       341 ~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~-G~~~~f~~~~~~~~i~~~~~  391 (396)
T TIGR00882       341 SATIYLIGFQFAKQLAMIFLSTLAGNMYDSI-GFQGAYLVLGCIVLLFTLIS  391 (396)
T ss_pred             EEEeehHHHHHHHHHHHHHHHHhHHHHHHhc-ccHHHHHHHHHHHHHHHHHH
Confidence            7777766 57888999999999999999986 78888888777666555443

>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]

Probab=99.93  E-value=4.8e-23  Score=196.35  Aligned_cols=358  Identities=13%  Similarity=0.027  Sum_probs=239.4

Q ss_pred             chhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCc
Q 014698           40 GRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL  119 (420)
Q Consensus        40 ~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~  119 (420)
                      ..++..+..+|.++.+|+.|++|||++++.++++..++.+..++ ++|++.+++.|+++|++.++.......++.|++++
T Consensus       124 ~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~-a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~  202 (521)
T KOG0255|consen  124 QSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAF-APNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSP  202 (521)
T ss_pred             HHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHhhccchhHHhHhhheeecCc
Confidence            56777788889999999999999999999999999999999986 99999999999999999999999999999999999


Q ss_pred             cccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhh--
Q 014698          120 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKS--  197 (420)
Q Consensus       120 ~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  197 (420)
                      ++|+.+..+ ......+..++++.++++.+  +||+.+++..++.++..+.+++.||++++...+.+.++..+..++.  
T Consensus       203 ~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~  279 (521)
T KOG0255|consen  203 KQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAK  279 (521)
T ss_pred             chhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHHHHHHHHHHHh
Confidence            999999999 88888888888888888887  8999999999999887766666669888765444433221111110  


Q ss_pred             -------hh----hh----hhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHH
Q 014698          198 -------LS----AS----LEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWV  262 (420)
Q Consensus       198 -------~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  262 (420)
                             ..    ..    .++.....++..+.++++.|++....+...+..+.......-++.... .+|.+..   ..
T Consensus       280 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~-~lg~~~~---~~  355 (521)
T KOG0255|consen  280 LNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVS-GLGGNIY---LN  355 (521)
T ss_pred             hcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhh-hcCchHH---HH
Confidence                   00    00    001111123345778888876555554444444332222222222222 2344332   23


Q ss_pred             HHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcH--HHHHHHHHHHHHhhhhhhh
Q 014698          263 SILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPH--WEIVGILTAGLALSSFALS  340 (420)
Q Consensus       263 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~  340 (420)
                      ....+..........+...||.||         +...........++++..........  .......+...+.+.....
T Consensus       356 ~~~~~~~~~p~~~~~~~~~~~~gR---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  426 (521)
T KOG0255|consen  356 FTLSGLVELPAYFRNGLLLPEFGR---------RPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNL  426 (521)
T ss_pred             HHHHHHHHhhHHHHHHHHHHHhCc---------HHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHH
Confidence            334444666666777889999974         45555555554444444444333222  2222223333344434444


Q ss_pred             hhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCCCCC
Q 014698          341 GLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNF  416 (420)
Q Consensus       341 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (420)
                      ......+.+|+..|..+.+..+....++++++|.+.-.....  .....+...+....+.+.+...+.++++.++.
T Consensus       427 ~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l  500 (521)
T KOG0255|consen  427 IFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQM--FPLLGLILFGWLALLLGLLSLLLLPETKGKPL  500 (521)
T ss_pred             HHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--cccchHHHHHHHHHHHHHHHHhcCcccCCCCC
Confidence            455556778999999999999999999999999887655442  22223333345555566666567777665543

>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]

Probab=99.93  E-value=1.6e-23  Score=198.46  Aligned_cols=368  Identities=15%  Similarity=0.098  Sum_probs=244.9

Q ss_pred             cccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhc
Q 014698           37 GRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS  116 (420)
Q Consensus        37 g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~  116 (420)
                      +...........+++++.+++.|+.|||+.++++.+.+.++.+++++ ++|+++++++|+++|+|.|......+.+++|.
T Consensus        92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~-a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEi  170 (513)
T KOG0254|consen   92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIAL-APSWYQLIVGRILTGLGVGGASVLAPVYISEI  170 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHhccchhhhhhcchhhHhhc
Confidence            45555666667778999999999999999999999999999999987 99999999999999999999999999999999


Q ss_pred             CCccccchhhHHHHhhhhhHHHHHHhhHHHhhhc-cchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhh--
Q 014698          117 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYIN--  193 (420)
Q Consensus       117 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  193 (420)
                      .|++.||...+..+....+|..++..++....+. ++||..+.+..+++++..+..+++||+|++..++.++++....  
T Consensus       171 ap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~  250 (513)
T KOG0254|consen  171 APAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLK  250 (513)
T ss_pred             CChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHH
Confidence            9999999999999999999999996666554433 5899999999999998777788999998875543333222110  


Q ss_pred             ---h--hhhhhhhh--------hhhcccccccchhhhhh----cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCc
Q 014698          194 ---M--KKSLSASL--------EEMGESLKDVPWKAIFR----SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNL  256 (420)
Q Consensus       194 ---~--~~~~~~~~--------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  256 (420)
                         .  +++.....        .+......+..++++++    ++......+..+.+..+......|.+.++++. |.+.
T Consensus       251 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~-g~~~  329 (513)
T KOG0254|consen  251 RLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA-GLKS  329 (513)
T ss_pred             HHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc-CCCC
Confidence               0  00000000        00101111112333332    23344445555555555666677888888775 6654


Q ss_pred             chhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhh---c-C-------CCcHHHHH
Q 014698          257 TEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI---D-L-------GLPHWEIV  325 (420)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~-------~~~~~~~~  325 (420)
                      .. .......++...++..+...+.||+|||         ..+..+.....++..+...   . .       ......+.
T Consensus       330 ~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr---------~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (513)
T KOG0254|consen  330 DT-FLASIILGVVNFLGTLVATYLVDRFGRR---------KLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIV  399 (513)
T ss_pred             ch-HHHHHHHHHHHHHHHHHHHHHHHHhccH---------HHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHH
Confidence            33 4555667777888888889999999964         3333333333332222211   1 1       11122222


Q ss_pred             HHHHHHHHhhhhhhhhhh-hhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHH-H
Q 014698          326 GILTAGLALSSFALSGLY-CTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGT-I  403 (420)
Q Consensus       326 ~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~-~  403 (420)
                      ...+.-..+.....+..+ ...+.+|.+.|+++.++......+...+-......+.+..+ ....|...+..+.+... .
T Consensus       400 ~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~-~~~~f~~f~~~~~~~~~~f  478 (513)
T KOG0254|consen  400 FLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALG-IGGTFGYFGGICLLSLIIF  478 (513)
T ss_pred             HHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchHHHHHHHHHHHHHHH
Confidence            222222223323333333 44566888999999999999999888877777666666542 33455555555555555 6


Q ss_pred             HhhhccCCCCCCCC
Q 014698          404 VWLAFASSKPQNFS  417 (420)
Q Consensus       404 ~~~~~~~~~~~~~~  417 (420)
                      ++...+|+|.++.+
T Consensus       479 v~~~~pETkg~sle  492 (513)
T KOG0254|consen  479 VFFFVPETKGLTLE  492 (513)
T ss_pred             heEEcccCCCCcHH
Confidence            77778888877644

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=99.93  E-value=7.8e-23  Score=187.94  Aligned_cols=340  Identities=10%  Similarity=0.032  Sum_probs=219.2

Q ss_pred             hhhhhccccccchhh-hhHHhHHhhhhcchhhh-----cchhHHHHHHHHH-HHHHHHHHHH--hhch-HHHHHHHHHHH
Q 014698           29 KKWVGLRIGRRGRIY-LKDTNLLELLRLPLLFV-----TWIRKVLQTGVLI-WSLATALLPL--LAGF-MPGLVLSRVLV   98 (420)
Q Consensus        29 ~~~l~~~~g~~~~l~-~~~~~~~~l~~~p~~~~-----~~~r~~~~~~~~~-~~~~~~~~~~--~~~~-~~~l~~~r~l~   98 (420)
                      .++.+.+..+.+.+. ........++..|+.|+     .+|||..++.+.+ ........+.  ..++ ...++..-++.
T Consensus        28 l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (390)
T TIGR02718        28 LREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACA  107 (390)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHH
Confidence            344445555554432 12224456666776544     5677775444432 2211222221  1222 33445555666


Q ss_pred             HhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCc
Q 014698           99 GIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGE  178 (420)
Q Consensus        99 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~  178 (420)
                      ++..+...+...++..|..++++++...+....+..+|.++|+...+++.+.+|||..|++.++..++..+..++++|++
T Consensus       108 ~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~  187 (390)
T TIGR02718       108 SLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRA  187 (390)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence            67777888888889999999888899999999999999999999999999999999999999988877555555555543


Q ss_pred             ccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcch
Q 014698          179 TSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTE  258 (420)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  258 (420)
                      +++++++ +                     .+..++++++|+|.++......++..........+.+.|++| .|+++++
T Consensus       188 ~~~~~~~-~---------------------~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~  244 (390)
T TIGR02718       188 VASPEAP-L---------------------ARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEW  244 (390)
T ss_pred             cCccccc-h---------------------hhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHH
Confidence            2211100 0                     001125678888988888877778777778888899999988 5999999


Q ss_pred             hhHHHHhhHH-HHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh-hc---CCCcHHHHHHHHHHHHH
Q 014698          259 AAWVSILPPL-ASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS-ID---LGLPHWEIVGILTAGLA  333 (420)
Q Consensus       259 ~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~g~~  333 (420)
                      .|......+. ..+++.++.|++.||++++       | .................. ..   ............+.++.
T Consensus       245 ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~-------~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (390)
T TIGR02718       245 IGRLGMAGGAVTVLLGCGGGAWLVRRAGLW-------R-TFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLI  316 (390)
T ss_pred             HHHHHhHHHHHHHHHHHHHHHHHHHHhhHH-------H-HHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHH
Confidence            9998887764 5667788999999999964       2 222222211111111111 11   11111222222333344


Q ss_pred             hhhhhhhhhhhhhhccCc-cchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHH
Q 014698          334 LSSFALSGLYCTHQDISP-EYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLT  400 (420)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~  400 (420)
                      .+...........+..++ +++++..+..+...++|..++|.+.|.+.|.. +++..|...+++.+++
T Consensus       317 ~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~-G~~~~f~~~~~~~l~a  383 (390)
T TIGR02718       317 TGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRF-GYAGGFLSGTVLAVLA  383 (390)
T ss_pred             HHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccHHHHHHHHHHHHHH
Confidence            444444444555555665 88999999999999999999999999999986 6777777765544443

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=99.92  E-value=1.6e-22  Score=189.14  Aligned_cols=324  Identities=13%  Similarity=0.114  Sum_probs=216.6

Q ss_pred             hhhhccccccchhhhhHH---hHHhhhhcchhhh----cch-hHHHHHHHHHHHHHHHHHHHhhch------HHHHHHHH
Q 014698           30 KWVGLRIGRRGRIYLKDT---NLLELLRLPLLFV----TWI-RKVLQTGVLIWSLATALLPLLAGF------MPGLVLSR   95 (420)
Q Consensus        30 ~~l~~~~g~~~~l~~~~~---~~~~l~~~p~~~~----~~~-r~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r   95 (420)
                      ..++.+....+.+.....   .+...+.|++.||    +|| |+.++.+....+++.+++.. .++      ...+++.+
T Consensus        28 ~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~  106 (437)
T TIGR00792        28 DVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFT-TPDFSATGKLVYAYITY  106 (437)
T ss_pred             HccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHh-CCCCCcchHHHHHHHHH
Confidence            344444444444444333   3346666777887    454 55777888888887777654 443      45677788


Q ss_pred             HHHHhccccchhhhHHHHHhcC-CccccchhhHHHHhhhhhHHHHHHhhHHHhhh-------ccchhHHHHHHHHHHHHH
Q 014698           96 VLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-------NLGWESVFYIFGLLGIAW  167 (420)
Q Consensus        96 ~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-------~~gwr~~f~~~~~~~~~~  167 (420)
                      ++.+++.+...+...++..|.. +++||++..++.+.+..+|..+++.+.+.+..       ..+||+.+.+.+++.++.
T Consensus       107 ~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~  186 (437)
T TIGR00792       107 ILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVS  186 (437)
T ss_pred             HHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHH
Confidence            8889888887777788889987 56899999999999999988877766655542       458999999998887775


Q ss_pred             HH-HhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhh
Q 014698          168 FS-GFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPT  246 (420)
Q Consensus       168 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (420)
                      .+ ..+..+|++++.++++  ++                 +......++++++||+++...+..++..........+.+.
T Consensus       187 ~~~~~~~~~e~~~~~~~~~--~~-----------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (437)
T TIGR00792       187 LIICFFGTKERYSEIPKNI--EK-----------------KLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVY  247 (437)
T ss_pred             HHHHHcCCEecCCCCCccc--cc-----------------CCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhhe
Confidence            44 3445555432111100  00                 0000112567888999998888888877777776667777


Q ss_pred             HhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHH
Q 014698          247 YFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVG  326 (420)
Q Consensus       247 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (420)
                      |.++..+ ++.+.+.+.....++.+++.++.+++.||+|+|        +. ...+.....+.........++.....+.
T Consensus       248 ~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (437)
T TIGR00792       248 YFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK--------IL-FAGGILLMVLGYLIFFFAGSNLPLILVL  317 (437)
T ss_pred             eEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH--------HH-HHHHHHHHHHHHHHHHHcchhHHHHHHH
Confidence            7766555 455667777778899999999999999999964        22 2233333333333333322223333444


Q ss_pred             HHHHHHHhhhhhhhhhhhhhhccC-------ccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698          327 ILTAGLALSSFALSGLYCTHQDIS-------PEYASILLGITNTVGAVPGIVGVALTGYLLDST  383 (420)
Q Consensus       327 ~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~  383 (420)
                      .++.+++.+...+.......+..+       ++.+|++.|+.+....+|..+++.+.|.+.|..
T Consensus       318 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~  381 (437)
T TIGR00792       318 IILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGII  381 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            455666666555555555444433       566899999999999999999999999999875

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=99.92  E-value=2.7e-22  Score=172.84  Aligned_cols=323  Identities=15%  Similarity=0.084  Sum_probs=240.4

Q ss_pred             hhhhhccccccchhhhhHHhHH---hhhhcchhhhcchhHHHHHHHHHHHHHHHHHHH--hhchHHHHHHHHHHHHhccc
Q 014698           29 KKWVGLRIGRRGRIYLKDTNLL---ELLRLPLLFVTWIRKVLQTGVLIWSLATALLPL--LAGFMPGLVLSRVLVGIGEG  103 (420)
Q Consensus        29 ~~~l~~~~g~~~~l~~~~~~~~---~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l~G~~~~  103 (420)
                      .+.+..+..+.+.+...++..+   ++..+.+.+|.+.|+-++.++.++++++.+..-  ...++..++.+-++.|.|.+
T Consensus        40 ~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~  119 (422)
T COG0738          40 KEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIG  119 (422)
T ss_pred             HHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhH
Confidence            3344444444444444444433   455555589999999999999999999998741  25678889999999999999


Q ss_pred             cchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhc-------------------cchhHHHHHHHHHH
Q 014698          104 VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-------------------LGWESVFYIFGLLG  164 (420)
Q Consensus       104 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~-------------------~gwr~~f~~~~~~~  164 (420)
                      ...+.++.+++...|+++-.+.+++.+..+++|.+++|++++.+..+                   -.||++|...+...
T Consensus       120 ~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~l  199 (422)
T COG0738         120 LLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLL  199 (422)
T ss_pred             HHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence            99999999999999998899999999999999999999999988762                   13788888877776


Q ss_pred             HHHHHHhhhcc--cCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhh
Q 014698          165 IAWFSGFKILQ--EGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS  242 (420)
Q Consensus       165 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (420)
                      ++..+.....+  +.++..+++.+.                      ++....+++|+|+++...+..+++-.......+
T Consensus       200 vll~v~~~~~k~p~~~~~~~~~~~~----------------------~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gs  257 (422)
T COG0738         200 VLLAVLILLSKLPDLQVAAPSLGAS----------------------GSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGS  257 (422)
T ss_pred             HHHHHHHHhccCCcCCccccccccc----------------------ccchHHHHHhChHHHHHHHHHHHHHhHHHHHHH
Confidence            66554444333  222111111000                      000246899999999999999999999999999


Q ss_pred             hhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHH
Q 014698          243 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHW  322 (420)
Q Consensus       243 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (420)
                      +++.|+.+..|.+..++....+....+.++|++++.++.+|+..        .|.+...+......+..... ..  ..+
T Consensus       258 fl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~--------~k~Laf~a~~~ill~~~~~l-~~--g~v  326 (422)
T COG0738         258 FLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKP--------EKYLAFYALIAILLLLAVAL-IG--GVV  326 (422)
T ss_pred             HHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH--------HHHHHHHHHHHHHHHHHHHH-hc--ChH
Confidence            99999999779999999999999999999999999999999875        33433333333333333222 22  355


Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCce
Q 014698          323 EIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSW  386 (420)
Q Consensus       323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~  386 (420)
                      ....+++.|.+.+...|.......+..| ++...+.+ .-.+..+|+++.|++.|++.|..|..
T Consensus       327 ~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~-~l~maivGGAiiP~l~G~i~d~~g~~  388 (422)
T COG0738         327 ALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSG-LLVMAIVGGAIIPPLQGVIADMFGIQ  388 (422)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHhccC-ccccccce-eeeeheecchHHHHHHHHHHHhhhhH
Confidence            5667788899999888888888888887 44444333 35567789999999999999997433

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=99.92  E-value=1.9e-29  Score=236.54  Aligned_cols=365  Identities=16%  Similarity=0.151  Sum_probs=244.5

Q ss_pred             chhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhc---hHHHHHHHHHHHHhccccchhhhHHHHHhc
Q 014698           40 GRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAG---FMPGLVLSRVLVGIGEGVSPSAATDLIARS  116 (420)
Q Consensus        40 ~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~  116 (420)
                      ......+..+|+++.+.+.|++|||+.+..+.++..+++++.++ ++   +++.+.++|+++|++.|...+....++.|.
T Consensus        52 ~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~  130 (451)
T PF00083_consen   52 TSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAF-APSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEI  130 (451)
T ss_pred             HHHHHhhhcccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccc
Confidence            34445555667888888899999999999999999999999986 88   999999999999999999999999999999


Q ss_pred             CCccccchhhHHHHhhhhhHHHHHHhhHHHhhhc---cchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhh
Q 014698          117 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN---LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYIN  193 (420)
Q Consensus       117 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~---~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (420)
                      .|+++|++..++.+....+|..++..++..+.+.   .+||..+.+.++++++..+...++||+|++...+.++++....
T Consensus       131 ~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~  210 (451)
T PF00083_consen  131 APPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKV  210 (451)
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccccccccc
Confidence            9999999999999999999999998887655433   3599999999999988777888999999876555444333221


Q ss_pred             hhh-----hhhhhhhhh----ccc-ccccchhhhhhcHH----HHHHHHHHHHhHH-HHHHHhhhhhhHhhhhhCCCcch
Q 014698          194 MKK-----SLSASLEEM----GES-LKDVPWKAIFRSKA----VWAMIYAHFCGSW-GHYTCLSWLPTYFSEELSLNLTE  258 (420)
Q Consensus       194 ~~~-----~~~~~~~~~----~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~  258 (420)
                      .++     ..+++.++.    ++. .++.+++++++++.    ............+ +......+.|..+++ .+.+.. 
T Consensus       211 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~~~~~~-  288 (451)
T PF00083_consen  211 LRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-AGISNS-  288 (451)
T ss_pred             cccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccc-cccccc-
Confidence            111     001111111    111 11134667777643    2222223332222 223444455666554 466655 


Q ss_pred             hhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHH----hhcCCC----cHHHHHHHHHH
Q 014698          259 AAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS----SIDLGL----PHWEIVGILTA  330 (420)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~----~~~~~~~~~~~  330 (420)
                       -.......+...++.+++..+.||+|||         .....+.....++....    ....+.    .........+.
T Consensus       289 -~~~~~~~~~~~~~~~~~~~~~~~~~GRr---------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~  358 (451)
T PF00083_consen  289 -FLATLILGLVNFLGTLLAIFLIDRFGRR---------KLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALF  358 (451)
T ss_pred             -cccccccccccccccccccccccccccc---------cccccccccccccccccccccccccccccccccccceeeeec
Confidence             2233445566667777788999999975         22223322222222221    111111    11222222222


Q ss_pred             HHHhh-hhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698          331 GLALS-SFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFA  409 (420)
Q Consensus       331 g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (420)
                      ....+ +..+.......|.+|++.|+++.|+.....++++.++|.+...+.+..+ ....+.+.++++++..+..+.+.+
T Consensus       359 ~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~-~~~~~~i~~~~~~i~~i~~~~~lp  437 (451)
T PF00083_consen  359 FAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG-GWGVFLIFAGVCLIAIIFVYFFLP  437 (451)
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccchhhHHHHHHHHhheeEEEe
Confidence            22222 2233333445677899999999999999999999999999998888764 344566666777777788888899


Q ss_pred             CCCCCCCCC
Q 014698          410 SSKPQNFST  418 (420)
Q Consensus       410 ~~~~~~~~~  418 (420)
                      |+|+++.+|
T Consensus       438 ET~g~~l~e  446 (451)
T PF00083_consen  438 ETKGKTLEE  446 (451)
T ss_pred             eCCCCCHHH
Confidence            999887654

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>TIGR01272 gluP glucose/galactose transporter

Probab=99.92  E-value=2.7e-22  Score=176.87  Aligned_cols=275  Identities=13%  Similarity=0.069  Sum_probs=202.6

Q ss_pred             hchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhc--------------
Q 014698           85 AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN--------------  150 (420)
Q Consensus        85 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~--------------  150 (420)
                      .++++.+++.-++.|.|.+...+..+.++++..|+|++++.+++.+..+++|..++|.+++.+...              
T Consensus         7 ~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~   86 (310)
T TIGR01272         7 QRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANA   86 (310)
T ss_pred             hhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhH
Confidence            678999999999999999999999999999999999999999999999999999999999987732              


Q ss_pred             --cchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHH
Q 014698          151 --LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIY  228 (420)
Q Consensus       151 --~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (420)
                        .+||++|++.+.+.++..+.+.+.+.++.+++++  ++...    +          +.   ...++.+|+|.++...+
T Consensus        87 ~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~--~~~~~----~----------~~---~~~~~~~~~~~~~l~~~  147 (310)
T TIGR01272        87 EAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADV--ARVSS----G----------DT---TQKTSAFQFTHLVLGAL  147 (310)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccc--ccccc----c----------cc---cchhhHHhhHHHHHHHH
Confidence              4799999987777655544444443222111110  00000    0          00   01135677888998888


Q ss_pred             HHHHhHHHHHHHhhhhhhHhhhh--hCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHh
Q 014698          229 AHFCGSWGHYTCLSWLPTYFSEE--LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSP  306 (420)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~  306 (420)
                      ..+++.....+...|.+.|+.+.  +|+++.+.+...+....+.++|+++.+++.||++++        +.+ ..+....
T Consensus       148 ~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~--------~~l-~~~~~l~  218 (310)
T TIGR01272       148 GIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQG--------RYL-AFNAFLA  218 (310)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH--------HHH-HHHHHHH
Confidence            88888888999999999999864  689999999999999999999999999999999964        222 2333333


Q ss_pred             HHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCce
Q 014698          307 AVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSW  386 (420)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~  386 (420)
                      .+...+.....  .........+.|++.+...+.......+..|+ +.+++.++. ....+|+++.|.+.|.+.|.. +.
T Consensus       219 ~~~~~l~~~~~--~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~-g~  293 (310)
T TIGR01272       219 VLLSIGAALTH--GYVAMWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCL-GI  293 (310)
T ss_pred             HHHHHHHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhc-cc
Confidence            33333332222  22233455667888887777777777676654 456677775 667799999999999999986 56


Q ss_pred             eeeehh
Q 014698          387 SMSLFA  392 (420)
Q Consensus       387 ~~~~~~  392 (420)
                      +.++++
T Consensus       294 ~~a~~v  299 (310)
T TIGR01272       294 QLAFAL  299 (310)
T ss_pred             hHHHHH
Confidence            666654

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=99.91  E-value=6.5e-22  Score=183.66  Aligned_cols=343  Identities=14%  Similarity=0.136  Sum_probs=235.9

Q ss_pred             hhhhhcc--ccccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccch
Q 014698           29 KKWVGLR--IGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSP  106 (420)
Q Consensus        29 ~~~l~~~--~g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~  106 (420)
                      ..++++.  .............+...+.+.++|.+|||.+++.+.++..+++++++. ++|...++++..+.|+|.|...
T Consensus        71 ~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~at-A~~~~~~iag~~l~GvgaG~~~  149 (599)
T PF06609_consen   71 NADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCAT-AQNMNTFIAGMVLYGVGAGVQE  149 (599)
T ss_pred             HHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhc-CCcHHHHHHHHHHHHHhhHHHH
Confidence            5555554  233333344444555777777799999999999999999999999986 9999999999999999976665


Q ss_pred             hhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHh--hhcccCcccCCCC
Q 014698          107 SAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGF--KILQEGETSNGAT  184 (420)
Q Consensus       107 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~--~~~~~~~~~~~~~  184 (420)
                       .....++|..|.|.|....++.....-.....+|.++..+..+.+|||.|++..+...+.+++.  +..|++++..+.+
T Consensus       150 -~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~  228 (599)
T PF06609_consen  150 -LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGR  228 (599)
T ss_pred             -HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccc
Confidence             4566799999999998888777766555556777787777667799999999988776644333  3333332211111


Q ss_pred             cCc-cchh------------------------h-hhhhhhhhhh-----------------hhhc-c-cccccchhhhhh
Q 014698          185 LAP-RSNY------------------------I-NMKKSLSASL-----------------EEMG-E-SLKDVPWKAIFR  219 (420)
Q Consensus       185 ~~~-~~~~------------------------~-~~~~~~~~~~-----------------~~~~-~-~~~~~~~~~~~~  219 (420)
                      +.. ++.-                        . ....+|++..                 -|.. . +++..| .+++|
T Consensus       229 ~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P-~~Lf~  307 (599)
T PF06609_consen  229 KLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFP-HRLFK  307 (599)
T ss_pred             cCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCC-HHHhc
Confidence            111 1110                        0 0011222211                 1221 1 233344 46788


Q ss_pred             c-HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcc---hhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHH
Q 014698          220 S-KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLT---EAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVR  295 (420)
Q Consensus       220 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~  295 (420)
                      + |.+....+..++....++....+.|......++-|+.   +.++.....+++..++..+.+.+..++++-       |
T Consensus       308 ~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~-------K  380 (599)
T PF06609_consen  308 DRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHI-------K  380 (599)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccch-------h
Confidence            7 5566666777777777888888999988888777663   567888888889999999999999888653       4


Q ss_pred             HHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHH
Q 014698          296 KICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVAL  375 (420)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~  375 (420)
                      ..++....+..+.+-.+....+++....+...++.|++.+....+.....+-..|+++.|++.|+..+++.+|+.+|..+
T Consensus       381 w~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aI  460 (599)
T PF06609_consen  381 WQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAI  460 (599)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHH
Confidence            44334443444333334444455455555556777888887776766666666899999999999999999999999998


Q ss_pred             HHHHhc
Q 014698          376 TGYLLD  381 (420)
Q Consensus       376 ~g~l~~  381 (420)
                      ...+..
T Consensus       461 y~~I~~  466 (599)
T PF06609_consen  461 YNAIFT  466 (599)
T ss_pred             HHHHHH
Confidence            877664

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=99.90  E-value=2.6e-20  Score=171.98  Aligned_cols=334  Identities=16%  Similarity=0.140  Sum_probs=239.5

Q ss_pred             hhcchhhhcc-hhHHHHHHHHHHHHHHHHHHHhhch-HHHHHHHHHHHHhccccchhhhHHHHHhcCCcccc--------
Q 014698           53 LRLPLLFVTW-IRKVLQTGVLIWSLATALLPLLAGF-MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER--------  122 (420)
Q Consensus        53 ~~~p~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--------  122 (420)
                      +-+.+.|..+ ||+.+.....+..+.+....+..++ ++...+.-++.-++.+...+...+++.|..+++++        
T Consensus        89 ~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP~la~~~~~~~~~~~~~  168 (477)
T PF11700_consen   89 FLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLPDLARPEPRVRAAREPS  168 (477)
T ss_pred             HHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCChhhhhhhhhh
Confidence            3334467777 5556666666666677766654344 44444555555567778888889999999998888        


Q ss_pred             ------------------chhhHHHHhhhhhHHHHHHhhHHHhhhc--------cchhHHHHHHHHHHHHH-HHHhhhcc
Q 014698          123 ------------------SRAVSFVFGGLSFGSVAGLLLAPPIIEN--------LGWESVFYIFGLLGIAW-FSGFKILQ  175 (420)
Q Consensus       123 ------------------~~~~~~~~~~~~~g~~~g~~l~~~l~~~--------~gwr~~f~~~~~~~~~~-~~~~~~~~  175 (420)
                                        ++..+.-.+...+|.++.-.+.-.+...        .+-|..+.+.++.-++. +...+++|
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~  248 (477)
T PF11700_consen  169 ANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLP  248 (477)
T ss_pred             ccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCC
Confidence                              9999999999999988877776554321        23588888888876664 45556666


Q ss_pred             cCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCC
Q 014698          176 EGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLN  255 (420)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  255 (420)
                      |.+++++.+.....        .....++.     ...++++.|+|.....++..+++.-+...+......|.++++|++
T Consensus       249 ~~~~~~~~~~~~~~--------~~~g~~~l-----~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s  315 (477)
T PF11700_consen  249 DRPGPRPLPSGSSY--------LRFGFKRL-----WRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMS  315 (477)
T ss_pred             CCCCCCCCCcchhH--------HHHHHHHH-----HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcC
Confidence            66543222111100        01111111     112456677899999999999999999999999999999999999


Q ss_pred             cchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHh-HHHHHHHh------hcCCCcHHHHHHHH
Q 014698          256 LTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSP-AVCMTLSS------IDLGLPHWEIVGIL  328 (420)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~~~  328 (420)
                      ..+...+.....+.+++|.++.+++.||+|.|       ++..+..+.... .+......      ...++.+...+..+
T Consensus       316 ~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k-------~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~  388 (477)
T PF11700_consen  316 TTQLIVFGLVVQIVAIIGALLFGWLQDRFGPK-------TKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAV  388 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-------hhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHH
Confidence            99999999999999999999999999999976       222222222222 22221111      11333455566667


Q ss_pred             HHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhh
Q 014698          329 TAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWL  406 (420)
Q Consensus       329 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (420)
                      +.|++.|..+....+...+..|+++.+..+|++.......+.+||.+.|.+.|.+|+.+..+....++.+++.++++.
T Consensus       389 ~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~  466 (477)
T PF11700_consen  389 LIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFF  466 (477)
T ss_pred             HHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Confidence            889999999999999999999999999999999999999999999999999999988888888877666655555533

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]

Probab=99.89  E-value=1.7e-22  Score=175.99  Aligned_cols=368  Identities=17%  Similarity=0.123  Sum_probs=245.5

Q ss_pred             cccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhc-------hHHHHHHHHHHHHhccccchhhh
Q 014698           37 GRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAG-------FMPGLVLSRVLVGIGEGVSPSAA  109 (420)
Q Consensus        37 g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~~~~~~~~  109 (420)
                      ++....-..++.+|+++-|.++|++|||+++...+++..++++++++ +.       -..++...|++.|+|.|+-+|.+
T Consensus        87 ~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~-s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlS  165 (538)
T KOG0252|consen   87 ALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGL-SVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLS  165 (538)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhcc-CCCCCCCcchhhHHHHHHHHhhccccCCCcch
Confidence            34444556677788999999999999999999999999999987664 31       25789999999999999999999


Q ss_pred             HHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhc---------------cchhHHHHHHHHHHHHHHHHhhhc
Q 014698          110 TDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN---------------LGWESVFYIFGLLGIAWFSGFKIL  174 (420)
Q Consensus       110 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~---------------~gwr~~f~~~~~~~~~~~~~~~~~  174 (420)
                      .++.+|...+++||...+...+....|...|.+++-.+..-               .=||..+.+.+++++..+...+.+
T Consensus       166 AtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M  245 (538)
T KOG0252|consen  166 ATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKM  245 (538)
T ss_pred             HHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence            99999999999999999999999999999888877655421               139999999999999988888889


Q ss_pred             ccCcccCCCCcCccch-hhhhhhhhhhhh-----hhhcccccccc---hhhhhhc---HHHHHHHHHHHHhHHHHHHHhh
Q 014698          175 QEGETSNGATLAPRSN-YINMKKSLSASL-----EEMGESLKDVP---WKAIFRS---KAVWAMIYAHFCGSWGHYTCLS  242 (420)
Q Consensus       175 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  242 (420)
                      ||+++.+.-..++.+. ....++......     .+...+.+..+   +.+.+..   +.+......+|..-.++|....
T Consensus       246 ~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL  325 (538)
T KOG0252|consen  246 PETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNL  325 (538)
T ss_pred             CcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccc
Confidence            9987755211111000 000000000000     00001111111   2222222   4556667788888888888888


Q ss_pred             hhhhHhhhhhCCCcchhhH--------HHHhhH-HHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHH
Q 014698          243 WLPTYFSEELSLNLTEAAW--------VSILPP-LASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS  313 (420)
Q Consensus       243 ~~~~~~~~~~g~~~~~~~~--------~~~~~~-~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (420)
                      +....+++. |+.+.....        ...+.. .+.++|..+...++|++|         |+.....++.+..+..+..
T Consensus       326 ~~s~I~~~i-g~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iG---------Rk~iq~~GF~~~~i~~~~~  395 (538)
T KOG0252|consen  326 FQSVIFSAI-GVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIG---------RKYIQLMGFFIMTIFFFVI  395 (538)
T ss_pred             HHHHHHHhh-ccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhh---------hHHHHHhhHHHHHHHHHHH
Confidence            888888753 665544333        112222 233346667788999999         5566667777666666655


Q ss_pred             hhcCCCcHH--HHHHHHHHHHHhhhhhhhhh--hhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc-----cCC
Q 014698          314 SIDLGLPHW--EIVGILTAGLALSSFALSGL--YCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD-----STH  384 (420)
Q Consensus       314 ~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~-----~~~  384 (420)
                      ....++..-  -...+..+..+++.+.+...  ....+.+|.+.|+++.|+....+-.|++++...+.++.+     .. 
T Consensus       396 ~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~-  474 (538)
T KOG0252|consen  396 AGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNI-  474 (538)
T ss_pred             cCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccc-
Confidence            554442111  11111111222222333333  233466888999999999999999999999999999998     43 


Q ss_pred             ceeeeehhhhHHHHHHHHHHhhhccCCCCCCCC
Q 014698          385 SWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFS  417 (420)
Q Consensus       385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  417 (420)
                      +...++++.++++.+..+..+++ +|+++++.+
T Consensus       475 g~~~v~~i~~~~~~~gi~~T~l~-pEtk~~~le  506 (538)
T KOG0252|consen  475 GVRNVFIILAGCMLLGILFTLLI-PETKGKSLE  506 (538)
T ss_pred             cchHHHHHHHHHHHHhHheeEEe-ecccccCHH
Confidence            67778888877666665555444 477766543

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=99.89  E-value=4.8e-20  Score=167.11  Aligned_cols=308  Identities=15%  Similarity=0.115  Sum_probs=220.4

Q ss_pred             HHhHHhhhhcchhhhcc-hhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccch
Q 014698           46 DTNLLELLRLPLLFVTW-IRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR  124 (420)
Q Consensus        46 ~~~~~~l~~~p~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~  124 (420)
                      ...+...+.+.+.||.. +||++.+..++.++....... .++++.++..-++..+......|...++.-+..+  ++++
T Consensus        49 ~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~-~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~  125 (400)
T PF03825_consen   49 ARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAF-SSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGK  125 (400)
T ss_pred             HHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccC
Confidence            33445667777799887 777887777777766655554 7888888888888888888888998888888875  4566


Q ss_pred             hhHHHHhhhhhHHHHHHhh-HHHhhhccch---hHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhh
Q 014698          125 AVSFVFGGLSFGSVAGLLL-APPIIENLGW---ESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSA  200 (420)
Q Consensus       125 ~~~~~~~~~~~g~~~g~~l-~~~l~~~~gw---r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (420)
                      -.|-.....++|.+++... ++.+....++   ...+++.+...++.....+.+|+.+++++.++..+            
T Consensus       126 ~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~lp~~~~~~~~~~~~~------------  193 (400)
T PF03825_consen  126 DYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALFLPKTPPKRSAKESVK------------  193 (400)
T ss_pred             CCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHhCCCCccccccCCCcc------------
Confidence            6777888888888877554 2333333232   34566666555555555566777663322211100            


Q ss_pred             hhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhh
Q 014698          201 SLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQF  280 (420)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l  280 (420)
                             +....+..+++|+|++....+..++..........+.+.|+++..|.+....+...++..++.++.-...+++
T Consensus       194 -------~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~  266 (400)
T PF03825_consen  194 -------KLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRF  266 (400)
T ss_pred             -------cccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence                   0111123478999999999989898888888899999999998744777888888888888999999999999


Q ss_pred             hhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHH----HHHHHHhhhhhhhhhhhhhhccCccchHH
Q 014698          281 ADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGI----LTAGLALSSFALSGLYCTHQDISPEYASI  356 (420)
Q Consensus       281 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~g~  356 (420)
                      .+|+|.         +..+..+....++=..+.....++.+......    .+-|..++.........+.+..|++.|++
T Consensus       267 ~~r~g~---------~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at  337 (400)
T PF03825_consen  267 LKRFGI---------KWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRAT  337 (400)
T ss_pred             HHhcCH---------HHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHH
Confidence            999984         35555566666666555555433233222222    35788888777788888888899999999


Q ss_pred             HHHHHHHh-hhhhHHHHHHHHHHHhccCC
Q 014698          357 LLGITNTV-GAVPGIVGVALTGYLLDSTH  384 (420)
Q Consensus       357 ~~g~~~~~-~~~g~~~~~~~~g~l~~~~~  384 (420)
                      +.++++.. ..+|..+|..++|+++|+.+
T Consensus       338 ~Q~l~~~~~~Glg~~iG~~igG~l~~~~g  366 (400)
T PF03825_consen  338 AQGLYSALSFGLGGAIGSLIGGWLYDAFG  366 (400)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence            99999876 56999999999999999874

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=99.88  E-value=4.1e-20  Score=173.97  Aligned_cols=347  Identities=11%  Similarity=0.098  Sum_probs=204.1

Q ss_pred             hhhhcchhhh-cchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccc--cchhhH
Q 014698           51 ELLRLPLLFV-TWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE--RSRAVS  127 (420)
Q Consensus        51 ~l~~~p~~~~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~--r~~~~~  127 (420)
                      ..+++.+.|| .+||+++..+.++..++..++++..++.+.+.+.|+++|++.|...+...++++|++|+++  |..+++
T Consensus        74 ~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~  153 (500)
T PRK09584         74 VAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFT  153 (500)
T ss_pred             HHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcch
Confidence            4577888999 5999999999999999988887522456677789999999999999999999999998653  456889


Q ss_pred             HHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHH----hhhcccCcccCCCCcCccchhhh----------
Q 014698          128 FVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG----FKILQEGETSNGATLAPRSNYIN----------  193 (420)
Q Consensus       128 ~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~----------  193 (420)
                      +.+.+.++|..+||.+++++.+.+|||+.|++.++..++..+.    ...++|..++.++++.|......          
T Consensus       154 ~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (500)
T PRK09584        154 MYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIA  233 (500)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999977644443222    22333322111111111111000          


Q ss_pred             ------hhhhhhhhh---------hhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhh--hhCCCc
Q 014698          194 ------MKKSLSASL---------EEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSE--ELSLNL  256 (420)
Q Consensus       194 ------~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~  256 (420)
                            ...+.....         ......  ....++.-|+| .+... ..++....++......|.++..  ..+.+.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~-~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~  309 (500)
T PRK09584        234 IATWLLHNQEIARMALGVVALGIVVIFGKE--AFAMKGAARRK-MIVAF-ILMLEAIIFFVLYSQMPTSLNFFAIRNVEH  309 (500)
T ss_pred             HHHHHHhcchHHHHHHHHHHHHHHHHHHHH--HhhcCHHHHHH-HHHHH-HHHHHHHHHHHHHHHhccHHHHHHHHhccc
Confidence                  000000000         000000  00001122222 22222 2223344455555555555443  111221


Q ss_pred             ------chhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCC--------CcHH
Q 014698          257 ------TEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLG--------LPHW  322 (420)
Q Consensus       257 ------~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~  322 (420)
                            ...+++.+...+..++..++.+++-+|.++|..     .......++.+.++++........        +.++
T Consensus       310 ~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~-----~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~  384 (500)
T PRK09584        310 SILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLP-----MPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNW  384 (500)
T ss_pred             cccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCC-----cHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHH
Confidence                  225566677777777777777666666654421     112233333333333333221111        1335


Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc---------cCCceeeeehhh
Q 014698          323 EIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD---------STHSWSMSLFAP  393 (420)
Q Consensus       323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~---------~~~~~~~~~~~~  393 (420)
                      .....++.+++.....+.....+.+..|++.||+++|.......+|..++..+.+....         ..+++...|...
T Consensus       385 ~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~  464 (500)
T PRK09584        385 LIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQI  464 (500)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHH
Confidence            66667888999998888888888888999999999998776666666666555542211         012345566666


Q ss_pred             hHHHHHHHHHHhh
Q 014698          394 SIFFYLTGTIVWL  406 (420)
Q Consensus       394 ~~~~~~~~~~~~~  406 (420)
                      ++..++.+++.+.
T Consensus       465 ~~~~~~~a~~~~~  477 (500)
T PRK09584        465 GIATAVIAVLMLL  477 (500)
T ss_pred             HHHHHHHHHHHHH
Confidence            6555544444443

>TIGR00806 rfc RFC reduced folate carrier

Probab=99.88  E-value=5.8e-21  Score=170.45  Aligned_cols=333  Identities=13%  Similarity=-0.004  Sum_probs=217.8

Q ss_pred             hhhhhccccc-cchhhhh---HHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhcccc
Q 014698           29 KKWVGLRIGR-RGRIYLK---DTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGV  104 (420)
Q Consensus        29 ~~~l~~~~g~-~~~l~~~---~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~  104 (420)
                      .++++.+..+ .+.++..   .+.+..+..+.+.||.+.||++..+.+.+++.+++.++ ++++..+.+.|++.|++.|.
T Consensus        53 ~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~f-a~Sl~~L~i~R~llGvaEA~  131 (511)
T TIGR00806        53 LTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLL-GTSVWHMQLMEVFYSVTMAA  131 (511)
T ss_pred             HHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence            4455554444 4444444   44555777777799999999999999999999999987 89999999999999999999


Q ss_pred             chhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHH---HHHHHHHHHhhhcccCcccC
Q 014698          105 SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFG---LLGIAWFSGFKILQEGETSN  181 (420)
Q Consensus       105 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~---~~~~~~~~~~~~~~~~~~~~  181 (420)
                      .. +...++.+|+|+++|+++.++..++..+|.+++++++++ ...+|||+-+.+.-   ....+..+..+++|..++..
T Consensus       132 ~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl  209 (511)
T TIGR00806       132 RI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKRSL  209 (511)
T ss_pred             HH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCchhh
Confidence            99 999999999999999999999999999999999999999 55679998665432   22233556667777544421


Q ss_pred             ---CCCcCc-c---c-hhhhhhhhhhhh--hhhhc---ccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHh
Q 014698          182 ---GATLAP-R---S-NYINMKKSLSAS--LEEMG---ESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYF  248 (420)
Q Consensus       182 ---~~~~~~-~---~-~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (420)
                         +++..+ .   + +....++.....  .+...   -..-..++++..+||.++.-.+-..+...+++.+.+|.-...
T Consensus       210 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW  289 (511)
T TIGR00806       210 FFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLW  289 (511)
T ss_pred             hhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHH
Confidence               110000 0   0 000000000000  00000   000112345567788888777777777788888887777766


Q ss_pred             hhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHH
Q 014698          249 SEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGIL  328 (420)
Q Consensus       249 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (420)
                      .+..+-++...|.+-++..+.+.+..+..|++-.++.+-       ....+.+...+.+..+++... .++.+...+..+
T Consensus       290 ~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~-------~~l~l~v~s~~~~gll~~m~~-t~~Iw~~Y~~yv  361 (511)
T TIGR00806       290 GTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARW-------SKLLIAVVSAIQAGLVFWMSQ-SHDIWVLYVTYV  361 (511)
T ss_pred             HHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhh-------HHHHHHHHHHHHHHHhhhhhc-ccchHHHHHHHH
Confidence            654332223567777777788888888888885554321       233333333333333333333 333455555667


Q ss_pred             HHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHH
Q 014698          329 TAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVG  372 (420)
Q Consensus       329 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~  372 (420)
                      +++..+....+....-+......+..|...|+++++.-+-..+-
T Consensus       362 lf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtil  405 (511)
T TIGR00806       362 LFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTII  405 (511)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHhe
Confidence            77777766666666666666777888999999877655544443

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]

Probab=99.87  E-value=1.6e-21  Score=159.10  Aligned_cols=319  Identities=13%  Similarity=0.112  Sum_probs=210.9

Q ss_pred             hhhhHHhHHhhhhcchhhhcc-hhHHHHHHHHHHHHHHHHHH--HhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCC
Q 014698           42 IYLKDTNLLELLRLPLLFVTW-IRKVLQTGVLIWSLATALLP--LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIP  118 (420)
Q Consensus        42 l~~~~~~~~~l~~~p~~~~~~-~r~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~  118 (420)
                      .++....+...+++.+.||+. -|..-.+-++...++.++.+  -..+.+|+++.+|++.|+|.-..-++..+++..|+.
T Consensus        87 vYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFK  166 (459)
T KOG4686|consen   87 VYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFK  166 (459)
T ss_pred             eccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEec
Confidence            344445566888888888887 33333333333334444332  236889999999999999988888899999999999


Q ss_pred             ccccchhhHHHHhhhhhHHHHHHhhHHHhhhccch------hHH---HHHHHHH-HHHHHHHh--hhcccCcccCCCCcC
Q 014698          119 LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW------ESV---FYIFGLL-GIAWFSGF--KILQEGETSNGATLA  186 (420)
Q Consensus       119 ~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw------r~~---f~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~  186 (420)
                      .||.+.++|+.....-+|..+--.+.+++.+..+=      +..   ....+.. +...++..  .-..+++.+ +.-..
T Consensus       167 GKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D~rAe-rilh~  245 (459)
T KOG4686|consen  167 GKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRAE-RILHL  245 (459)
T ss_pred             CccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHH-HHHhh
Confidence            99999999999999999998877777777664320      011   1111111 11111111  111111110 00000


Q ss_pred             ccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhh
Q 014698          187 PRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILP  266 (420)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  266 (420)
                      ++ .          ...|..+-....++     .|++|.+.+..+++..+.+.+...-|.++++.+|+|+.+++.+.+..
T Consensus       246 e~-g----------~~Ge~pkLtdv~~f-----~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~v  309 (459)
T KOG4686|consen  246 EE-G----------FLGEEPKLTDVNTF-----YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTV  309 (459)
T ss_pred             hc-C----------cccCCccccccccc-----CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhh
Confidence            00 0          00000000000111     58899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhh
Q 014698          267 PLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTH  346 (420)
Q Consensus       267 ~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  346 (420)
                      .....+.+++.|.++||.|++       ..+. ..+.+.....-....+..-++   ...+.+.|+......-.....+.
T Consensus       310 y~Isav~spvfg~i~Dk~G~n-------~~wv-~~a~~~tl~~H~~l~Ft~lsP---y~~m~~lGLsysllAcslWP~va  378 (459)
T KOG4686|consen  310 YGISAVLSPVFGAISDKYGFN-------LWWV-ASACILTLLGHSGLFFTFLSP---YTSMTFLGLSYSLLACSLWPCVA  378 (459)
T ss_pred             hhhhhhhhhhHHHhHhhhcce-------ehhH-HHHHHHHHHHhhhHHhhhccH---HHHHHHHhhhHHHHHHHHhhhhh
Confidence            999999999999999999964       2222 222222222222222222222   34455567777655555566666


Q ss_pred             hccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceee
Q 014698          347 QDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSM  388 (420)
Q Consensus       347 ~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~  388 (420)
                      ..+|.++-|++.|..+.++++|-++.|.+.|.+.|.-|+|..
T Consensus       379 ~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~  420 (459)
T KOG4686|consen  379 SLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDN  420 (459)
T ss_pred             hhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhh
Confidence            778999999999999999999999999999999998876643

>PTZ00207 hypothetical protein; Provisional

Probab=99.86  E-value=4.1e-19  Score=166.28  Aligned_cols=372  Identities=12%  Similarity=0.032  Sum_probs=240.8

Q ss_pred             hhhhhccccccchhhhhHHhH--HhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhh------chHHHHHHHHHHHHh
Q 014698           29 KKWVGLRIGRRGRIYLKDTNL--LELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLA------GFMPGLVLSRVLVGI  100 (420)
Q Consensus        29 ~~~l~~~~g~~~~l~~~~~~~--~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~r~l~G~  100 (420)
                      ..+++.+..+.+.+...+...  .++..|++.|++|+|+++.++.+++.++++++++ +      ++++.+.+.|++.|+
T Consensus        54 ~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~al-a~~~~i~~s~~~l~l~r~l~G~  132 (591)
T PTZ00207         54 QARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFAL-TFQEVIEGSVVRLSVYNGLMTL  132 (591)
T ss_pred             HHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-HhcccccCcHHHHHHHHHHHHH
Confidence            333443444444443332222  3446788899999999999999999999999886 5      689999999999999


Q ss_pred             ccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHH-HHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcc
Q 014698          101 GEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVA-GLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGET  179 (420)
Q Consensus       101 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~  179 (420)
                      |.+...+.....+.+|+| ++||++.|+...+.++|.++ +++..+++.  .+|+..|++.+++.++..+....+.++++
T Consensus       133 G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~ll~~~~vr~p~  209 (591)
T PTZ00207        133 GCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGILAIVFMRLPP  209 (591)
T ss_pred             HHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHhheeCCc
Confidence            999999999999999997 78999999999999999976 555555444  36899999988888775444433333332


Q ss_pred             cCC---CC----cCccc-----------------h------------------------------------h-hh-----
Q 014698          180 SNG---AT----LAPRS-----------------N------------------------------------Y-IN-----  193 (420)
Q Consensus       180 ~~~---~~----~~~~~-----------------~------------------------------------~-~~-----  193 (420)
                      ...   ++    +.++.                 .                                    . ..     
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~  289 (591)
T PTZ00207        210 FHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVI  289 (591)
T ss_pred             chhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence            111   11    11110                 0                                    0 00     


Q ss_pred             -h--------------h-hhhh-h-hh---------hh-------hc--ccccccchhhhhhcHHHHHHHHHHHHhHHHH
Q 014698          194 -M--------------K-KSLS-A-SL---------EE-------MG--ESLKDVPWKAIFRSKAVWAMIYAHFCGSWGH  237 (420)
Q Consensus       194 -~--------------~-~~~~-~-~~---------~~-------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (420)
                       .              + ++.. + +.         .+       .+  .+....++++.+++..+|.+.+..++.....
T Consensus       290 ~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~g  369 (591)
T PTZ00207        290 FPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVGAH  369 (591)
T ss_pred             HHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhCch
Confidence             0              0 0000 0 00         00       00  0111125677888999999999999988888


Q ss_pred             HHHhhhhhhHhhhhhCCCcch--hhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhh
Q 014698          238 YTCLSWLPTYFSEELSLNLTE--AAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI  315 (420)
Q Consensus       238 ~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (420)
                      ......+.+..+..-|.+.+.  ...+.++.++.+.+|++..|.+.....+|+..+...|...+.+..+.....+++...
T Consensus       370 l~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~~~~~~lll~~~  449 (591)
T PTZ00207        370 FVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSVCIITMLTLFLT  449 (591)
T ss_pred             heeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHH
Confidence            888888888877643663322  233678999999999999999884443332111112344444444432333332222


Q ss_pred             cCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHH-HHHHHHHhccCC----c-----
Q 014698          316 DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVG-VALTGYLLDSTH----S-----  385 (420)
Q Consensus       316 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~-~~~~g~l~~~~~----~-----  385 (420)
                      .+  ...+.+..++.|++.|.........+.+.+. ++-|+-.-+.....-+|+.+- -.+.|.++|+-.    +     
T Consensus       450 ~p--~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G  526 (591)
T PTZ00207        450 LP--KAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTE  526 (591)
T ss_pred             CC--ccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCC
Confidence            22  1456777888899999777777777777777 888888777777777777766 567788887531    1     


Q ss_pred             ---eeeeehhhhHHHHHHHHHHhhh
Q 014698          386 ---WSMSLFAPSIFFYLTGTIVWLA  407 (420)
Q Consensus       386 ---~~~~~~~~~~~~~~~~~~~~~~  407 (420)
                         +..+|++.++.++.+.+....+
T Consensus       527 ~~C~~~~~~v~~~~~~~g~~~s~~l  551 (591)
T PTZ00207        527 RVCVVMPLAFLLGLSFLAFITSTYV  551 (591)
T ss_pred             ceeeHhHHHHHHHHHHHHHHHHhhe
Confidence               4567777777676666654443

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=99.85  E-value=1.1e-18  Score=160.22  Aligned_cols=362  Identities=11%  Similarity=0.089  Sum_probs=228.3

Q ss_pred             hhhccccccchhhhhHHhHH---hhhhcchhhh----cchhHHHHHH-HHHHHHHHHHHHHhhchHH-------------
Q 014698           31 WVGLRIGRRGRIYLKDTNLL---ELLRLPLLFV----TWIRKVLQTG-VLIWSLATALLPLLAGFMP-------------   89 (420)
Q Consensus        31 ~l~~~~g~~~~l~~~~~~~~---~l~~~p~~~~----~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~-------------   89 (420)
                      .++.+....+.+.......+   +.+.|.++||    +||||.++.+ .....++..+.++ +++..             
T Consensus        33 ~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~-~~~~~~~~~~~~~~~~~~  111 (477)
T TIGR01301        33 ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGF-AADIGHLFGDNLDKKTKP  111 (477)
T ss_pred             HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHh-Cchhhhhccccccccchh
Confidence            33444444444433333333   4555666894    8888887765 5555555555554 55432             


Q ss_pred             ----HHHHHHHHHHhccccchhhhHHHHHhcCCcccc--chhhHHHHhhhhhHHHHHHhhHHHh--hhcc----------
Q 014698           90 ----GLVLSRVLVGIGEGVSPSAATDLIARSIPLEER--SRAVSFVFGGLSFGSVAGLLLAPPI--IENL----------  151 (420)
Q Consensus        90 ----~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~l~~~l--~~~~----------  151 (420)
                          .++++-.+..++.....+...++++|.+|+++|  +.+.++.+...++|.++|+.+++..  .+.+          
T Consensus       112 ~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~  191 (477)
T TIGR01301       112 RAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGV  191 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccccccc
Confidence                222233334447777778889999999998765  5899999999999999999999875  2211          


Q ss_pred             ---chhHHHHHHHHHHHHH-HHHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhh-----cHH
Q 014698          152 ---GWESVFYIFGLLGIAW-FSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFR-----SKA  222 (420)
Q Consensus       152 ---gwr~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  222 (420)
                         +.|..|++.++..++. .+..+..+|+++.++++..+++.+..            ++...+..++++++     .|.
T Consensus       192 ~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~i~~~~~~mP~~  259 (477)
T TIGR01301       192 SCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPP------------SKHGEEAFFGELFGAFKYLPRP  259 (477)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccc------------cccchhhhHHHHHHHHHHCCHH
Confidence               5688999988877664 45566677766433221110000000            00000111233333     367


Q ss_pred             HHHHHHHHHHhHHHHHHHhhhhhhHhh-hhhCCCcchh----------hHHHHhhHHHHHHHHHhhhhhhhhhhhcCcch
Q 014698          223 VWAMIYAHFCGSWGHYTCLSWLPTYFS-EELSLNLTEA----------AWVSILPPLASVLVTSIAAQFADNLIATGVET  291 (420)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~----------~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~  291 (420)
                      ++.+++..++.+++.+.+..|.+.|.. +.++.++.+.          .+......+...+.+++..++.+|+|+     
T Consensus       260 m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~-----  334 (477)
T TIGR01301       260 VWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGA-----  334 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----
Confidence            889999999999999999999998876 4565443211          122334444555666677778888874     


Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHhhcCC------C--------------cHHHHHHHHHHHHHhhhhhhhhhhhhhhccCc
Q 014698          292 TMVRKICQTIAFLSPAVCMTLSSIDLG------L--------------PHWEIVGILTAGLALSSFALSGLYCTHQDISP  351 (420)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  351 (420)
                         ||.....+.++.+.++....+...      .              ....++.+...|+..+.........+.+..++
T Consensus       335 ---~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~  411 (477)
T TIGR01301       335 ---GKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSN  411 (477)
T ss_pred             ---chhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccc
Confidence               233334443333333333221110      0              13445556778898888888888888888884


Q ss_pred             --cchHHHHHHHHHhhhhhHHHHHHHHHHHhccCC-ceeeeehhhhHHHHHHHHHHhhhccCCCC
Q 014698          352 --EYASILLGITNTVGAVPGIVGVALTGYLLDSTH-SWSMSLFAPSIFFYLTGTIVWLAFASSKP  413 (420)
Q Consensus       352 --~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (420)
                        +..|..+|+.|.+..+.+.+.....|.+.+..| +....+.+.++.++++++..++..++.++
T Consensus       412 ~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~  476 (477)
T TIGR01301       412 LGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV  476 (477)
T ss_pred             cCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence              556999999999999999999998888776665 45556666677777777777777776654

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>TIGR00788 fbt folate/biopterin transporter

Probab=99.84  E-value=7e-19  Score=164.25  Aligned_cols=330  Identities=12%  Similarity=-0.006  Sum_probs=206.6

Q ss_pred             hhhhcchhhhcc-----hhHHHHHHHHHHH-HHHHHHHHhhch-HHHHHHHHHHHHhccccchhhhHHHHHhcCCccccc
Q 014698           51 ELLRLPLLFVTW-----IRKVLQTGVLIWS-LATALLPLLAGF-MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERS  123 (420)
Q Consensus        51 ~l~~~p~~~~~~-----~r~~~~~~~~~~~-~~~~~~~~~~~~-~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~  123 (420)
                      -.+.+|+.|++.     ||+.++++.++.+ +.....+. .++ .....+..++.+++.+...++..++..|..+ +++.
T Consensus        77 K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~-~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~  154 (468)
T TIGR00788        77 KPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPG-KVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPS  154 (468)
T ss_pred             HHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCC
Confidence            445899999996     6666777766653 33333332 344 3444458899999999999999999999998 5555


Q ss_pred             hhhHHH---HhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhh
Q 014698          124 RAVSFV---FGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSA  200 (420)
Q Consensus       124 ~~~~~~---~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (420)
                      ...+..   ....++|.++|+.+++.+.+.++||..|++.+...++..+...+++|+++....+..+++.. ..... ..
T Consensus       155 ~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~-~~~~~-~~  232 (468)
T TIGR00788       155 AGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEM-NMALL-TL  232 (468)
T ss_pred             cCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchh-hhhhh-hh
Confidence            443333   34445899999999999999999999999988887776666677777642111110000000 00000 00


Q ss_pred             hhhhhcccccccchhhhhhcHHHHHHHHHHHH-hHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhh
Q 014698          201 SLEEMGESLKDVPWKAIFRSKAVWAMIYAHFC-GSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQ  279 (420)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~  279 (420)
                      ...+. .+......++.+++|.++...+..++ +.... ......-.+.++..|+++.+.|......+++.+++..+.++
T Consensus       233 ~~~~~-~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~-~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~  310 (468)
T TIGR00788       233 GVLAN-VKVQILGLRGAIQLLEIAKPLIFIFLSYANLP-GASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDR  310 (468)
T ss_pred             hHHHH-HHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcC-CCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHH
Confidence            00000 00001123456778888876655555 22111 11111111333567999999999999999999999999998


Q ss_pred             hhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh-----hc----CCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccC
Q 014698          280 FADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS-----ID----LGLPHWEIVGILTAGLALSSFALSGLYCTHQDIS  350 (420)
Q Consensus       280 l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  350 (420)
                      +.+|++.        | ..+..+.+..+.......     ..    ...........++.+++.+....+....+.+..|
T Consensus       311 ~~~~~~~--------r-~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p  381 (468)
T TIGR00788       311 FLKTFPY--------R-LLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCP  381 (468)
T ss_pred             HHhhCCH--------H-HHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCC
Confidence            8888874        3 333333333333221110     00    0112222333455666666667777777788899


Q ss_pred             ccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCC----ceeeeehhhhH
Q 014698          351 PEYASILLGITNTVGAVPGIVGVALTGYLLDSTH----SWSMSLFAPSI  395 (420)
Q Consensus       351 ~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~----~~~~~~~~~~~  395 (420)
                      ++.+|+..++.+++.++|..+++.++|.+.+..|    +++..+....+
T Consensus       382 ~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i  430 (468)
T TIGR00788       382 SGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILG  430 (468)
T ss_pred             CCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHH
Confidence            9999999999999999999999999999998764    25544444333

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>PRK09669 putative symporter YagG; Provisional

Probab=99.83  E-value=1e-17  Score=156.49  Aligned_cols=323  Identities=12%  Similarity=0.017  Sum_probs=198.4

Q ss_pred             hhhhhccccccchhhhhHHhHH---hhhhcchhhh----cch-hHHHHHHHHHHHHHHHHHHHhhch------HHHHHHH
Q 014698           29 KKWVGLRIGRRGRIYLKDTNLL---ELLRLPLLFV----TWI-RKVLQTGVLIWSLATALLPLLAGF------MPGLVLS   94 (420)
Q Consensus        29 ~~~l~~~~g~~~~l~~~~~~~~---~l~~~p~~~~----~~~-r~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~   94 (420)
                      ...++.+....+.+........   ..+.|.+.||    +|| |+.++.+....++...+... .++      ...+++.
T Consensus        37 t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~-~p~~~~~~~~~~~~~~  115 (444)
T PRK09669         37 TDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFY-TPDFGATGKIIYACVT  115 (444)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHh-CCCCCcchHHHHHHHH
Confidence            4445555555555555544443   4455555787    444 56677777777777655432 332      3556666


Q ss_pred             HHHHHhccccchhhhHHHHHhcC-CccccchhhHHHHhhhhhHHHHHHhhHHHhhh-------ccchhHHHHHHHHHHHH
Q 014698           95 RVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-------NLGWESVFYIFGLLGIA  166 (420)
Q Consensus        95 r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-------~~gwr~~f~~~~~~~~~  166 (420)
                      ..+.+.+.+.......++.+|+. +++||.+..++...+..+|..+++.+...+..       ..+|+..+.+.++++.+
T Consensus       116 ~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v  195 (444)
T PRK09669        116 YILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVV  195 (444)
T ss_pred             HHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHH
Confidence            66667666667777789999998 56889999898888888888877765544332       34788888888877766


Q ss_pred             HHHHh-hhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhh
Q 014698          167 WFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLP  245 (420)
Q Consensus       167 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (420)
                      ..+.. +..+|++++++ +  ++                   .....++++++|||.++......++............+
T Consensus       196 ~~~~~~~~~~e~~~~~~-~--~~-------------------~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~  253 (444)
T PRK09669        196 LFFCCFFMTKERYTPEV-D--NS-------------------SSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATL  253 (444)
T ss_pred             HHHHHhCCeEEecCCCC-c--CC-------------------CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhh
Confidence            54333 33344321110 0  00                   00112256788999998887777766555554444444


Q ss_pred             hHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHH
Q 014698          246 TYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIV  325 (420)
Q Consensus       246 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (420)
                      .|.+...+ +++..+.+.....+..+++.++.+++.||+|+|       + ...............+.....++.....+
T Consensus       254 y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (444)
T PRK09669        254 YYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRV-------R-AFKWTIVAFVILSALIFFIPPSNVWLIFA  324 (444)
T ss_pred             eeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-------H-HHHHHHHHHHHHHHHHHHhCcchHHHHHH
Confidence            44444333 233344455555677788888999999999864       2 22222221222222222233333334455


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhhccC-------ccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698          326 GILTAGLALSSFALSGLYCTHQDIS-------PEYASILLGITNTVGAVPGIVGVALTGYLLDST  383 (420)
Q Consensus       326 ~~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~  383 (420)
                      ..++.+++.+...+.......+..+       .+..|...|..+....+|..+++.+.|.+.+..
T Consensus       325 ~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~  389 (444)
T PRK09669        325 LNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWV  389 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            5566788777666666665554443       234577889999999999999999999999876

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=99.82  E-value=1.3e-17  Score=145.23  Aligned_cols=328  Identities=14%  Similarity=0.077  Sum_probs=231.5

Q ss_pred             hhhhcchhhhcc-hhHHHHHHHHHHHHHHHHHHHhhc--hHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhH
Q 014698           51 ELLRLPLLFVTW-IRKVLQTGVLIWSLATALLPLLAG--FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVS  127 (420)
Q Consensus        51 ~l~~~p~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~  127 (420)
                      +..-|-+.|..+ |||.+-....+-.+.+....+..+  +++..++.-.+..++.....+...+++.+..++++-++..+
T Consensus        75 apiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~  154 (438)
T COG2270          75 APILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISG  154 (438)
T ss_pred             HHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccc
Confidence            333334467777 555565555665666666655344  34556667788888989999999999999999999999988


Q ss_pred             HHHhhhhhHHHHHHhhHH--Hhh----------------hccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccc
Q 014698          128 FVFGGLSFGSVAGLLLAP--PII----------------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRS  189 (420)
Q Consensus       128 ~~~~~~~~g~~~g~~l~~--~l~----------------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (420)
                      .-.....+|..+.-...-  ...                +...-|..+.+.++..++..+..+...++++..+..    +
T Consensus       155 lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~----~  230 (438)
T COG2270         155 LGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKISSP----P  230 (438)
T ss_pred             cccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhccccccccccc----c
Confidence            888888888776555431  111                122467888888888777554444443333321100    0


Q ss_pred             hhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHH
Q 014698          190 NYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLA  269 (420)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  269 (420)
                      . .    ......+|.     +.+++++.+++.+....+..+++.=+..........|..+.+|++..+...+.....+.
T Consensus       231 ~-~----~l~~g~k~L-----~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vv  300 (438)
T COG2270         231 P-T----ALRNGFKEL-----KSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVV  300 (438)
T ss_pred             h-H----HHHHHHHHH-----HHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHH
Confidence            0 0    001111111     12256777788899999999999999999999999999988999999999999999999


Q ss_pred             HHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhcc
Q 014698          270 SVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDI  349 (420)
Q Consensus       270 ~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  349 (420)
                      ++++.++.|++.||++.|       +... ....+....++......  ......+..++.|.+.|..+...-+...+.+
T Consensus       301 A~lg~ii~g~Ld~rfg~k-------~vl~-~~lvi~~~~~~~~~~~~--~~~~f~i~gll~g~s~G~~qA~SRSy~~~lv  370 (438)
T COG2270         301 AALGAIIAGFLDERFGSK-------PVLM-IGLVILSIAALYLIFLE--GELDFWILGLLVGTSLGGAQASSRSYLARLV  370 (438)
T ss_pred             HHHHHHHHHHHHHHhCCc-------eeeh-HHHHHHHHHHHHHHHcc--ccHHHHHHHHHHHHhcchHHHHHHHHHHHhC
Confidence            999999999999999975       2222 22222233333332222  2444445557789999999999999999999


Q ss_pred             CccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHH
Q 014698          350 SPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGT  402 (420)
Q Consensus       350 ~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~  402 (420)
                      |+++.++.+|+++......+.+||.+.+.+.+.+|+.+..+....++..+...
T Consensus       371 p~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~  423 (438)
T COG2270         371 PKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLL  423 (438)
T ss_pred             CCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHh
Confidence            99999999999999999999999999999999998888777765554444433

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=99.81  E-value=1.9e-17  Score=147.36  Aligned_cols=359  Identities=12%  Similarity=0.068  Sum_probs=221.5

Q ss_pred             hhccccccchhhhhHHhH---HhhhhcchhhhcchhHHHHHHHHH--HHHHHHHH-H---HhhchHH-HHHHHHHHHHhc
Q 014698           32 VGLRIGRRGRIYLKDTNL---LELLRLPLLFVTWIRKVLQTGVLI--WSLATALL-P---LLAGFMP-GLVLSRVLVGIG  101 (420)
Q Consensus        32 l~~~~g~~~~l~~~~~~~---~~l~~~p~~~~~~~r~~~~~~~~~--~~~~~~~~-~---~~~~~~~-~l~~~r~l~G~~  101 (420)
                      .+.+-++.|.+++.....   .+.+.+.+.||.+.||-++..+..  ...+.... .   .+..|.+ ..+++-...|+.
T Consensus        38 ~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~  117 (412)
T PF01306_consen   38 AGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLV  117 (412)
T ss_dssp             H---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTT
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            455555666565554333   345556679999955544333222  22222221 1   1122321 223333334444


Q ss_pred             cccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccC
Q 014698          102 EGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSN  181 (420)
Q Consensus       102 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~  181 (420)
                      .....|..-+++.++.  ++.+.-.|-.....++|.+++..++|.+.+. +-+..|++....+++..++....+++.+++
T Consensus       118 f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i-~p~~~fwi~s~~~~il~lll~~~~~~~~~~  194 (412)
T PF01306_consen  118 FNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI-NPNIIFWIASAAAIILLLLLLLLKPDVPPQ  194 (412)
T ss_dssp             TTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHSS---SSSS
T ss_pred             HcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee-CccHHHHHHHHHHHHHHHHHHHcCCcCchh
Confidence            4555566666665654  4556677888899999999999999999874 557788877666655544444443322221


Q ss_pred             CCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhh---CCCcch
Q 014698          182 GATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEEL---SLNLTE  258 (420)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~  258 (420)
                      .+.. |.+..+             +++.+.+...+++|+|++|.+.+........+..+....|.|..+.+   +.+...
T Consensus       195 ~~~~-~~~~~~-------------~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~  260 (412)
T PF01306_consen  195 AEVA-DALGAK-------------KDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQM  260 (412)
T ss_dssp             S-SS-TTSSS-------------------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHH
T ss_pred             hhhh-cccccC-------------CCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhH
Confidence            1111 110000             00111122468899999999988877777777777767777776533   344566


Q ss_pred             hhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhh
Q 014698          259 AAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFA  338 (420)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  338 (420)
                      .|.+.+...+..++...+.+++.+|+|.|         ..+..+..+..+=.......++ ++.....=.+-+.-.....
T Consensus       261 ~G~l~s~~v~~E~~~m~~~p~li~rig~k---------~~Lllag~i~~iRi~~~~~~~~-~~~i~~~klLH~~e~~l~l  330 (412)
T PF01306_consen  261 YGYLWSVQVFLEALMMFFSPWLINRIGAK---------NLLLLAGVIMAIRIIGSGFATN-PWVISLIKLLHALEFPLLL  330 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHHHHHHT--S-HHHHHHHHHHHHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHhcChH---------hHHHHHHHHHHHHHHHHhhhcc-hHHHHHHHHHHHHHHHHHH
Confidence            78888999999999999999999999963         3333444444554554444432 4444444477788777777


Q ss_pred             hhhhhhhhhccCccchHHHHHHH-HHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCCCCCC
Q 014698          339 LSGLYCTHQDISPEYASILLGIT-NTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFS  417 (420)
Q Consensus       339 ~~~~~~~~~~~~~~~~g~~~g~~-~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  417 (420)
                      ....-.+.+.+|++..++...+. +...+++..+.+.+.|.++|+. +++..|++.+.+.+...++..+..++.+++...
T Consensus       331 va~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~-G~~~tylimg~iv~~~~li~~f~l~~~~~~~~~  409 (412)
T PF01306_consen  331 VAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRI-GFQHTYLIMGLIVLPFTLISAFTLKKDKKQIVH  409 (412)
T ss_dssp             HHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHS--SSSTTCC
T ss_pred             HHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhc-CcHHHHHHHHHHHHHHHHHheeeecCCCccccc
Confidence            77777788889999999999986 5778899999999999999998 777788888887777777777777766665544


Q ss_pred             C
Q 014698          418 T  418 (420)
Q Consensus       418 ~  418 (420)
                      +
T Consensus       410 ~  410 (412)
T PF01306_consen  410 P  410 (412)
T ss_dssp             C
T ss_pred             C
Confidence            3

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.81  E-value=1.9e-16  Score=146.17  Aligned_cols=341  Identities=12%  Similarity=0.060  Sum_probs=194.1

Q ss_pred             hhccccccchhhhhHH---hHHhhhhcchhhhc-chhHHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHHhccccch
Q 014698           32 VGLRIGRRGRIYLKDT---NLLELLRLPLLFVT-WIRKVLQTGVLIWSLATALLPLLAG-FMPGLVLSRVLVGIGEGVSP  106 (420)
Q Consensus        32 l~~~~g~~~~l~~~~~---~~~~l~~~p~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~  106 (420)
                      ++.+....+.+...+.   .++.++++.+.||+ ||||++.++.++..++.++++. .+ +...+.+...+.++|.|...
T Consensus        40 lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~-~~~~~~~~~l~l~li~iG~G~~~  118 (493)
T PRK15462         40 LKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGA-SEIHPSFLYLSLAIIVCGYGLFK  118 (493)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHH-hhcchhHHHHHHHHHHHhccccc
Confidence            3333333344444333   34577888889999 9999999999999998876653 32 22334444445556666777


Q ss_pred             hhhHHHHHhcCCcc--ccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccC---
Q 014698          107 SAATDLIARSIPLE--ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSN---  181 (420)
Q Consensus       107 ~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~---  181 (420)
                      +...++++|.+|++  +|..++++.+.+.++|..++|.+.+++.+.+|||+.|.+.++..++..+......+..++.   
T Consensus       119 ~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~  198 (493)
T PRK15462        119 SNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGV  198 (493)
T ss_pred             ccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCC
Confidence            77789999999875  6999999999999999999999999999999999999987664444333332222111110   


Q ss_pred             CCCcCccchhh----------------hhhhhhhhhhhh-------------h--cccccccchhhhhhcH--HHHHHHH
Q 014698          182 GATLAPRSNYI----------------NMKKSLSASLEE-------------M--GESLKDVPWKAIFRSK--AVWAMIY  228 (420)
Q Consensus       182 ~~~~~~~~~~~----------------~~~~~~~~~~~~-------------~--~~~~~~~~~~~~~~~~--~~~~~~~  228 (420)
                      ++++.++++..                .......+....             .  ....+ .  .+.-|+|  .+..+.+
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~er~r~~~~~~l~~  275 (493)
T PRK15462        199 NKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKA-E--NQKQRKELGLIVTLTF  275 (493)
T ss_pred             CCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-C--CHHHHhhHHHHHHHHH
Confidence            01111000000                000000000000             0  00000 0  0111122  1222333


Q ss_pred             HHHHhHHHHHHHhhhhhhHhhhh-----hCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHH
Q 014698          229 AHFCGSWGHYTCLSWLPTYFSEE-----LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAF  303 (420)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~  303 (420)
                      ...+.+..+....+.+..|.++.     +|++ ...++..+...+..++.+++..++=.|..+|+..+....|...  ++
T Consensus       276 ~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~--g~  352 (493)
T PRK15462        276 FSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFAL--GL  352 (493)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHH--HH
Confidence            33444444555555666666553     2322 2356677888887787787777776666443222222234332  22


Q ss_pred             HHhHHHHHHH---hh--cC---CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhh-hhhHHHHHH
Q 014698          304 LSPAVCMTLS---SI--DL---GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVG-AVPGIVGVA  374 (420)
Q Consensus       304 ~~~~~~~~~~---~~--~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~~~~~  374 (420)
                      +..+++++..   ..  ..   .+..|.+...++...+--...+...+.+.+..|++.+|+.+|...... .+|..++..
T Consensus       353 ~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~  432 (493)
T PRK15462        353 GLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGV  432 (493)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2222222211   11  11   134555566677888888888888888888889999999999985533 455555555


Q ss_pred             HHHHH
Q 014698          375 LTGYL  379 (420)
Q Consensus       375 ~~g~l  379 (420)
                      +.+..
T Consensus       433 ~~~~~  437 (493)
T PRK15462        433 IADQT  437 (493)
T ss_pred             HHHHh
Confidence            54444

>PF13347 MFS_2: MFS/sugar transport protein

Probab=99.80  E-value=2.9e-17  Score=152.73  Aligned_cols=323  Identities=18%  Similarity=0.192  Sum_probs=224.4

Q ss_pred             hhhhccccccchhhhhHHhHHhh---hhcchhh----hcc-hhHHHHHHHHHHHHHHHHHHHhh-c-------hHHHHHH
Q 014698           30 KWVGLRIGRRGRIYLKDTNLLEL---LRLPLLF----VTW-IRKVLQTGVLIWSLATALLPLLA-G-------FMPGLVL   93 (420)
Q Consensus        30 ~~l~~~~g~~~~l~~~~~~~~~l---~~~p~~~----~~~-~r~~~~~~~~~~~~~~~~~~~~~-~-------~~~~l~~   93 (420)
                      ..++.+....+.+........++   +.|.+.|    |+| ||+.++.+....+++..++.. . +       ....+.+
T Consensus        30 ~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~-~~p~~~~~~~~~~~~~~  108 (428)
T PF13347_consen   30 DVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFS-PPPAGLSFTAKLVWLFV  108 (428)
T ss_pred             HHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhc-cccchhhhhhHHHHHHH
Confidence            33444445455555544444433   4445578    566 556677788888887777643 3 3       2234567


Q ss_pred             HHHHHHhccccchhhhHHHHHhcCC-ccccchhhHHHHhhhhhHHHHHHhhHHHhhhcc-------chhHHHHHHHHHHH
Q 014698           94 SRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-------GWESVFYIFGLLGI  165 (420)
Q Consensus        94 ~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-------gwr~~f~~~~~~~~  165 (420)
                      .-++..++.........++..|..+ ++||.+..+.-..+..+|..+...+.+.+.+..       +|++...+.+++.+
T Consensus       109 ~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~  188 (428)
T PF13347_consen  109 FYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGL  188 (428)
T ss_pred             HHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHH
Confidence            7777788888888899999999997 578999999999999998876666666555322       69999998888887


Q ss_pred             HHH-HHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhh
Q 014698          166 AWF-SGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWL  244 (420)
Q Consensus       166 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (420)
                      +.. +..+..+|++++.++++                    ++..-...+++++|||+++...+..++............
T Consensus       189 v~~~i~~~~~ke~~~~~~~~~--------------------~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~  248 (428)
T PF13347_consen  189 VFFLITFFFVKERSVEVTEQE--------------------KKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFL  248 (428)
T ss_pred             HHhhhhhheeeeccccccccc--------------------cccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHH
Confidence            754 44455566111111110                    011112336788999999999999999888888888888


Q ss_pred             hhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHH-HhhcCCCcHHH
Q 014698          245 PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTL-SSIDLGLPHWE  323 (420)
Q Consensus       245 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  323 (420)
                      +.|.++..|.+ ...+.+.....++.+++.++.++++||+|+|       +  ....+....+..... .....++....
T Consensus       249 ~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (428)
T PF13347_consen  249 PYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKK-------K--VYIIGLLLAALGFLLLFFLGPGSPWLV  318 (428)
T ss_pred             HHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccce-------e--ehhhhHHHHHHHHHHHHHHHhhhHHHH
Confidence            88888887776 5667777788899999999999999999975       2  222333333333332 23322446666


Q ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhccC-------ccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698          324 IVGILTAGLALSSFALSGLYCTHQDIS-------PEYASILLGITNTVGAVPGIVGVALTGYLLDST  383 (420)
Q Consensus       324 ~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~  383 (420)
                      .+...+.|++.+...........+..+       +++.|...|+.+....++..+++.+.+.+.+..
T Consensus       319 ~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~  385 (428)
T PF13347_consen  319 LILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALV  385 (428)
T ss_pred             HHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHh
Confidence            667788888888777666666655443       345799999999999999999999999998765

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=99.78  E-value=1.9e-15  Score=132.13  Aligned_cols=268  Identities=20%  Similarity=0.212  Sum_probs=192.5

Q ss_pred             HHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHH---HHHHHHH
Q 014698           91 LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIF---GLLGIAW  167 (420)
Q Consensus        91 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~---~~~~~~~  167 (420)
                      ....-.+.|+|.+.......++++|..|+|+|+++.++.....-+|.+++..+.+.+.+.++-.-..-+.   ++..++.
T Consensus        92 a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l  171 (403)
T PF03209_consen   92 AALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLL  171 (403)
T ss_pred             HHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHH
Confidence            4455677899999999999999999999999999999999999999999999999998877643333222   2222222


Q ss_pred             HHHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhH
Q 014698          168 FSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTY  247 (420)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (420)
                      .++..+=.|++..+..+..++++                 ..-...++++..+|+...+....++...+++.-...+-+|
T Consensus       172 ~~ia~wg~E~r~~~~~~~~~~~~-----------------~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPy  234 (403)
T PF03209_consen  172 NLIALWGQEPRRSRRAAAAERPR-----------------PPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPY  234 (403)
T ss_pred             HHHHHHhcccCCcccccCCCCCC-----------------ccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCc
Confidence            22222223332222221111110                 0011225677788888888888888888888888899999


Q ss_pred             hhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhh-hhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHH
Q 014698          248 FSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN-LIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVG  326 (420)
Q Consensus       248 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (420)
                      --+.+|+++.+...+....+.+..++....+++..| .+++       |...............+...-..++.+.....
T Consensus       235 gg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~-------~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~  307 (403)
T PF03209_consen  235 GGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK-------RTAALGCLLGALAFALIILAGPLGSPWLFRPG  307 (403)
T ss_pred             hhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch-------HHHHHHHHHHHHHHHHHHHHHhcccchHHHHH
Confidence            999999999999999999999999999998888774 3322       22221111122222222233334456677778


Q ss_pred             HHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc
Q 014698          327 ILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS  382 (420)
Q Consensus       327 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~  382 (420)
                      .+++|++.|.+.........+...+++.|..+|.-...+.++..++..++|.+.|.
T Consensus       308 ~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~  363 (403)
T PF03209_consen  308 VFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDL  363 (403)
T ss_pred             HHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            89999999988888888888888899999999999999999999999999999884

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>PRK10429 melibiose:sodium symporter; Provisional

Probab=99.78  E-value=3.3e-16  Score=147.31  Aligned_cols=326  Identities=13%  Similarity=0.074  Sum_probs=199.1

Q ss_pred             hhhhccccccchhhhhHHhHH---hhhhcchhhh----cch-hHHHHHHHHHHHHHHHHHHHhhch------HHHHHHHH
Q 014698           30 KWVGLRIGRRGRIYLKDTNLL---ELLRLPLLFV----TWI-RKVLQTGVLIWSLATALLPLLAGF------MPGLVLSR   95 (420)
Q Consensus        30 ~~l~~~~g~~~~l~~~~~~~~---~l~~~p~~~~----~~~-r~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r   95 (420)
                      ..++.+....+.+........   ..+.|.+.||    +|| |+.++.+....+++..++ +..++      +..+++.-
T Consensus        35 ~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~ll-f~~p~~~~~~~~~~~~~~~  113 (473)
T PRK10429         35 DVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLL-FSAHLFEGTAQYVFVCVTY  113 (473)
T ss_pred             HhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHH-HcCCCCCccHHHHHHHHHH
Confidence            344445454454544443332   4445666884    465 677777888877776555 22321      33455666


Q ss_pred             HHHHhccccchhhhHHHHHhcC-CccccchhhHHHHhhhhhHHHHHHhhHHHhhh-------ccchhHHHHHHHHHHHHH
Q 014698           96 VLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-------NLGWESVFYIFGLLGIAW  167 (420)
Q Consensus        96 ~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-------~~gwr~~f~~~~~~~~~~  167 (420)
                      .+.+++.....+...++..|.. +++||.+..++.....++|..+.+.+...+.+       ..+|+....+.++..++.
T Consensus       114 ~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~  193 (473)
T PRK10429        114 ILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVS  193 (473)
T ss_pred             HHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHH
Confidence            6777887888888889999998 58999999998777777776666555443322       225777777766666554


Q ss_pred             H-HHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhh
Q 014698          168 F-SGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPT  246 (420)
Q Consensus       168 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (420)
                      . +..+..+|+++.++.+..+++                 +...+..++.+++||.++......++..........+.+.
T Consensus       194 ~~~~~~~~~e~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y  256 (473)
T PRK10429        194 TIITLRNVHEVYSSDNQVSAEGS-----------------HLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIY  256 (473)
T ss_pred             HHHHHcCceecCCcccccccccc-----------------CCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheee
Confidence            3 333335554321111100000                 0001112445678999988888888877777776677776


Q ss_pred             HhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHH-HHHHHh---hcCCCcHH
Q 014698          247 YFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAV-CMTLSS---IDLGLPHW  322 (420)
Q Consensus       247 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~  322 (420)
                      |.+...+ +....+.+.....++.+++.++.+++.||+|+|       +...  .+.....+ ......   ...++...
T Consensus       257 ~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk-------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (473)
T PRK10429        257 YFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRR-------ILWA--GASIFPVLSCGVLLLMGLAAPHNALL  326 (473)
T ss_pred             EEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-------HHHH--HHHHHHHHHHHHHHHHhccCchhHHH
Confidence            6665433 455666676777788899999999999999964       2222  22222121 111111   12222333


Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhccC-------ccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698          323 EIVGILTAGLALSSFALSGLYCTHQDIS-------PEYASILLGITNTVGAVPGIVGVALTGYLLDST  383 (420)
Q Consensus       323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~  383 (420)
                      ..+..++.+++.+...........+..+       .+..|...|..+....++..+++.+.|.+.+..
T Consensus       327 ~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~  394 (473)
T PRK10429        327 IVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLI  394 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            3444455666666555555555554433       344677999999999999999999999999865

>PRK09848 glucuronide transporter; Provisional

Probab=99.77  E-value=2.6e-16  Score=147.31  Aligned_cols=323  Identities=10%  Similarity=0.038  Sum_probs=188.4

Q ss_pred             hhhhhccccccchhhhhHHhH---Hhhhhcchhhhc----chhH-HHHHHHHHHHHHHHHHHHhh----c--hHHHHHHH
Q 014698           29 KKWVGLRIGRRGRIYLKDTNL---LELLRLPLLFVT----WIRK-VLQTGVLIWSLATALLPLLA----G--FMPGLVLS   94 (420)
Q Consensus        29 ~~~l~~~~g~~~~l~~~~~~~---~~l~~~p~~~~~----~~r~-~~~~~~~~~~~~~~~~~~~~----~--~~~~l~~~   94 (420)
                      ...++.+....+.+.......   ...+.|.+.||.    |||| .+..+.+...+.+.+.....    +  .....+..
T Consensus        36 ~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (448)
T PRK09848         36 TDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLT  115 (448)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHH
Confidence            333444444444444443333   355666668886    5555 55666655554444431111    1  12234445


Q ss_pred             HHHHHhccccchhhhHHHHHhcCC-ccccchhhHHHHhhhh-----hHHHHHHhhHHHhhhcc--chhHHHHHHHHHHHH
Q 014698           95 RVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLS-----FGSVAGLLLAPPIIENL--GWESVFYIFGLLGIA  166 (420)
Q Consensus        95 r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~-----~g~~~g~~l~~~l~~~~--gwr~~f~~~~~~~~~  166 (420)
                      -.+.+++.+...+...++..|..+ ++||.+..+.-..+.+     ++..++|.+++...+..  +|.....+.++.+++
T Consensus       116 ~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~~~  195 (448)
T PRK09848        116 YMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMV  195 (448)
T ss_pred             HHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHH
Confidence            567787777788777777777764 4678888776654433     45555666655432111  121111222333332


Q ss_pred             HH-HHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhh
Q 014698          167 WF-SGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLP  245 (420)
Q Consensus       167 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (420)
                      .. +.....+|++++++++                       ...+..+++++|||.++...+..++............|
T Consensus       196 ~~~~~~~~~~e~~~~~~~~-----------------------~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~  252 (448)
T PRK09848        196 LYFICFKSTRENVVRIVAQ-----------------------PSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSL  252 (448)
T ss_pred             HHHHHHcCcEeccCCCccC-----------------------CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhe
Confidence            22 2223334432211100                       00111256788999999988888888888888888888


Q ss_pred             hHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCC-CcHHHH
Q 014698          246 TYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLG-LPHWEI  324 (420)
Q Consensus       246 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  324 (420)
                      .|+++.+|.++...++......++.+++.++.+++.||+++|        +.. ..+..+..+........+. +.+...
T Consensus       253 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~--------~~~-~~g~~~~~i~~~~~~~~~~~~~~~~~  323 (448)
T PRK09848        253 FYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK--------NTF-LIGALLGTCGYLLFFWVSVWSLPVAL  323 (448)
T ss_pred             eeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH--------HHH-HHHHHHHHHHHHHHHHcCchhHHHHH
Confidence            899988888776665555555667788899999999999863        222 2233333332222223222 223333


Q ss_pred             HHHHHHHHHhhhhhhhhhhhhhhccCc-------cchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698          325 VGILTAGLALSSFALSGLYCTHQDISP-------EYASILLGITNTVGAVPGIVGVALTGYLLDST  383 (420)
Q Consensus       325 ~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~  383 (420)
                      ...++.+++.+...+.......+..|.       ++.|...|+.+....+|..+++.+.|.+.+..
T Consensus       324 ~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~  389 (448)
T PRK09848        324 VALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLS  389 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            445566777776665555555554443       34699999999999999999999999998765

>PRK11462 putative transporter; Provisional

Probab=99.76  E-value=1.4e-15  Score=142.00  Aligned_cols=321  Identities=14%  Similarity=0.048  Sum_probs=187.3

Q ss_pred             hhhhccccccchhhhhHHhHH---hhhhcchhhhc----c-hhHHHHHHHHHHHHHHHHHHHhhch------HHHHHHHH
Q 014698           30 KWVGLRIGRRGRIYLKDTNLL---ELLRLPLLFVT----W-IRKVLQTGVLIWSLATALLPLLAGF------MPGLVLSR   95 (420)
Q Consensus        30 ~~l~~~~g~~~~l~~~~~~~~---~l~~~p~~~~~----~-~r~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r   95 (420)
                      ..++.+....+.+.......-   -.+.|.+.||.    | ||+.++++....+++..++-. .++      ...+.+.-
T Consensus        38 ~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~-~p~~s~~~~~~y~~~~~  116 (460)
T PRK11462         38 DIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYS-TPDLSMNGKMIYAAITY  116 (460)
T ss_pred             HhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHh-CCCCCcchHHHHHHHHH
Confidence            334444444444444444333   33345556653    4 556777787777777766532 332      33455666


Q ss_pred             HHHHhccccchhhhHHHHHhcCC-ccccchhhHHHHhhhhhHHHHHHhhHHHhhhc-------cchhHHHHHHHHHHHHH
Q 014698           96 VLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-------LGWESVFYIFGLLGIAW  167 (420)
Q Consensus        96 ~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~-------~gwr~~f~~~~~~~~~~  167 (420)
                      .+..++.........++.+|..+ +|||++..++...+.++|..+++.+...+.+.       .+|+....+.+++.++.
T Consensus       117 ~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~  196 (460)
T PRK11462        117 TLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMM  196 (460)
T ss_pred             HHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHH
Confidence            66778878888888899999986 68999999999999999988887776555443       25777777777766655


Q ss_pred             HHHhhh-cccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhh
Q 014698          168 FSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPT  246 (420)
Q Consensus       168 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (420)
                      ....+. .+|.++. +++   +.       +            .+..++..++||.++......++..............
T Consensus       197 ~~i~~~~~kE~~~~-~~~---~~-------~------------~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y  253 (460)
T PRK11462        197 LAFCFFTTKERVEA-PPT---TT-------S------------MREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMY  253 (460)
T ss_pred             HHHHHhcceeccCC-Ccc---CC-------C------------HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhh
Confidence            433333 3332211 110   00       0            0112457788888887766665555554444444444


Q ss_pred             HhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHH
Q 014698          247 YFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVG  326 (420)
Q Consensus       247 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (420)
                      |.+...|. +...+.+.....++.+++.++++++.||+++|       + .....................++.....+.
T Consensus       254 ~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (460)
T PRK11462        254 YVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKV-------T-IFWWTNALLAVISLAMFFVPMQASITMFVF  324 (460)
T ss_pred             hhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-------H-HHHHHHHHHHHHHHHHHHhchhHHHHHHHH
Confidence            44444443 33445566777888899999999999999864       2 222122222222222222222222223333


Q ss_pred             HHHHHHHhhhhhhhhhhhhhhccC-------ccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698          327 ILTAGLALSSFALSGLYCTHQDIS-------PEYASILLGITNTVGAVPGIVGVALTGYLLDST  383 (420)
Q Consensus       327 ~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~  383 (420)
                      .++.|++.+...........+..+       .+..|...+.......+|.++++.+.|.+.+..
T Consensus       325 ~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~  388 (460)
T PRK11462        325 IFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYG  388 (460)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            344555554333322333332222       233455567777889999999999999998764

>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=99.76  E-value=1.2e-16  Score=139.80  Aligned_cols=341  Identities=12%  Similarity=0.090  Sum_probs=230.9

Q ss_pred             HHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhh-----chHH--HHHHHHHHHHhccccchhhhHHHHHhcCCccc
Q 014698           49 LLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLA-----GFMP--GLVLSRVLVGIGEGVSPSAATDLIARSIPLEE  121 (420)
Q Consensus        49 ~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-----~~~~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~  121 (420)
                      ...+.+..++|++|-|...+++..+..++..+-...+     +.++  ....+..+.+.++-........+.+-|+|++|
T Consensus        94 p~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q  173 (480)
T KOG2563|consen   94 PFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ  173 (480)
T ss_pred             HHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch
Confidence            3355555569999999999999999999998865411     3344  67789999999988888887899999999999


Q ss_pred             cchhhHHHHhhhhhHHHHHHhhHHHhhhcc------chhH--HHHHHHHHHHHHHHHh-hhcccCcccCCCCcCccchhh
Q 014698          122 RSRAVSFVFGGLSFGSVAGLLLAPPIIENL------GWES--VFYIFGLLGIAWFSGF-KILQEGETSNGATLAPRSNYI  192 (420)
Q Consensus       122 r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------gwr~--~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  192 (420)
                      |..+..+-..+..+|.++|.++...+..+-      .|..  .|+..+.++.+.+++. +..++.|+.+.....+.+.  
T Consensus       174 ra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~--  251 (480)
T KOG2563|consen  174 RAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ--  251 (480)
T ss_pred             hhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh--
Confidence            999999999999999999999888777543      3544  3444444444333332 2333333222221111100  


Q ss_pred             hhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHH
Q 014698          193 NMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVL  272 (420)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  272 (420)
                                    +..-..+.++.++|+++....+.+......+++..+.+-.-+... |++...+|.......+++++
T Consensus       252 --------------~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~s-gY~~~~aG~ig~l~iv~Gml  316 (480)
T KOG2563|consen  252 --------------DASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPS-GYEGVFAGYIGALMIVAGML  316 (480)
T ss_pred             --------------cCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccc-cCCccccchhHHHHHHHHHH
Confidence                          011123367899999999998888887777877777666555543 78888899999999999999


Q ss_pred             HHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHH--HhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccC
Q 014698          273 VTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTL--SSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDIS  350 (420)
Q Consensus       273 ~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  350 (420)
                      ++.+.|.+.||.++.       ++.............+.+  .........+.......+|.+.....+...-...|...
T Consensus       317 ga~~~gii~Dktk~f-------k~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~Ty  389 (480)
T KOG2563|consen  317 GALASGIIADKTKKF-------KLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTY  389 (480)
T ss_pred             HHHHHHhhhhhhhhH-------HHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeecc
Confidence            999999999998753       333333222222221222  22233334555556667777777777777666777777


Q ss_pred             ccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCc---eeeeehhhhHHHHHHHHHHhhhccCCCC
Q 014698          351 PEYASILLGITNTVGAVPGIVGVALTGYLLDSTHS---WSMSLFAPSIFFYLTGTIVWLAFASSKP  413 (420)
Q Consensus       351 ~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (420)
                      |..-++..|+.+..+++-+.+-..+.+...+..+.   +...-+.....+.+..++..++++..++
T Consensus       390 Pv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R  455 (480)
T KOG2563|consen  390 PVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRR  455 (480)
T ss_pred             ccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHh
Confidence            77778899999999999999999999988877641   3323344444455555555555544333

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=99.69  E-value=5.7e-14  Score=126.55  Aligned_cols=294  Identities=14%  Similarity=0.116  Sum_probs=204.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhch------HHHHHHHHHHHHhccccchhhhHHHHHhcCC-ccccchhhHHHHhhhhh
Q 014698           63 IRKVLQTGVLIWSLATALLPLLAGF------MPGLVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSF  135 (420)
Q Consensus        63 ~r~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~  135 (420)
                      +|+.++.+.+-+++.+.++-. +++      ....++.-.+.+++.........++.+|..+ ++||.+..+.-+.+.++
T Consensus        82 fRP~lL~g~ip~~i~~~l~F~-~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~  160 (467)
T COG2211          82 FRPWLLWGAIPFAIVAVLLFI-TPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASL  160 (467)
T ss_pred             ccHHHHHHhHHHHHHHHHHHc-CCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHH
Confidence            677888888888888887743 553      4456677788889988888888899999985 68999999999999999


Q ss_pred             HHHHHHhhHHHhhh-------ccchhHHHHHHHHHHHHHHHHhh-hcccCcccCCCCcCccchhhhhhhhhhhhhhhhcc
Q 014698          136 GSVAGLLLAPPIIE-------NLGWESVFYIFGLLGIAWFSGFK-ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGE  207 (420)
Q Consensus       136 g~~~g~~l~~~l~~-------~~gwr~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (420)
                      |..+...+...+..       ..||+..-.+.++++++..+..+ ..+|...+....+.+.                  +
T Consensus       161 g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~------------------~  222 (467)
T COG2211         161 GGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGV------------------K  222 (467)
T ss_pred             HHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccc------------------c
Confidence            97766655554443       34788888888888777654444 4444433211111000                  0


Q ss_pred             cccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhc
Q 014698          208 SLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT  287 (420)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~  287 (420)
                      ...+..+..++|||++...++...+...+..........|.+...|.+.............+.+++.++..++.+|+|+|
T Consensus       223 ~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk  302 (467)
T COG2211         223 LKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK  302 (467)
T ss_pred             ccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH
Confidence            01111234678899999999888888888888888888888888888888888888888888888899999999999953


Q ss_pred             CcchHHHHHHHHHHHHHHhHHHHHHHhhcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhcc-------CccchHHHHH
Q 014698          288 GVETTMVRKICQTIAFLSPAVCMTLSSIDL-GLPHWEIVGILTAGLALSSFALSGLYCTHQDI-------SPEYASILLG  359 (420)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-------~~~~~g~~~g  359 (420)
                               .....+.++..+......+.+ ++....++...+.+.+.+...+.....+.+..       ..+..|...|
T Consensus       303 ---------~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s  373 (467)
T COG2211         303 ---------KLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYS  373 (467)
T ss_pred             ---------HHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHH
Confidence                     333344444444433333333 33334444446666776655555555444332       2344788999


Q ss_pred             HHHHhhhhhHHHHHHHHHHHhccCC
Q 014698          360 ITNTVGAVPGIVGVALTGYLLDSTH  384 (420)
Q Consensus       360 ~~~~~~~~g~~~~~~~~g~l~~~~~  384 (420)
                      ....+.-+|.+++..+.|++.+..|
T Consensus       374 ~~tF~~K~g~ala~~~~g~~L~~~G  398 (467)
T COG2211         374 GMTFFRKLGLALAGFIPGWILGAIG  398 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            9999999999999999999998763

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=99.69  E-value=4.2e-14  Score=126.31  Aligned_cols=356  Identities=14%  Similarity=0.163  Sum_probs=218.6

Q ss_pred             Hhhhhcchhhhcc-hhHHHHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHhccccchhhhHHHHHhcCCcc--ccch
Q 014698           50 LELLRLPLLFVTW-IRKVLQTGVLIWSLATALLPLLA--GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE--ERSR  124 (420)
Q Consensus        50 ~~l~~~p~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~  124 (420)
                      ..++++.+.||.- +||++.++.++..++.++.+. +  .+...+.++-.+.++|.|..-+...++++|.+|++  +|-.
T Consensus        77 t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~-~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~  155 (498)
T COG3104          77 TPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAI-SSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDG  155 (498)
T ss_pred             HHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhc-cccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCC
Confidence            3788888899987 899999999999999999876 5  46778999999999999999999999999999864  4788


Q ss_pred             hhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhh-----------
Q 014698          125 AVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYIN-----------  193 (420)
Q Consensus       125 ~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------  193 (420)
                      .+++++++.++|+.++|.+.+++.+++||...|...++-....++..+..++........+++......           
T Consensus       156 gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (498)
T COG3104         156 GFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVV  235 (498)
T ss_pred             CccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHH
Confidence            899999999999999999999999999999999998877666555555554332221111111100000           


Q ss_pred             -----------hhhhhhhhhh------hhcccccccchhhhhhc-HHHH---HHHHHHHHhHHHHHHHhhhhhhHhhhh-
Q 014698          194 -----------MKKSLSASLE------EMGESLKDVPWKAIFRS-KAVW---AMIYAHFCGSWGHYTCLSWLPTYFSEE-  251 (420)
Q Consensus       194 -----------~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-  251 (420)
                                 ..+.+.....      +..--.+..+..+...+ ++.+   .+.+....++..+....+.+..|..+. 
T Consensus       236 ~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v  315 (498)
T COG3104         236 MILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNV  315 (498)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhh
Confidence                       0000000000      00000000000111111 2222   222233333333333334444554442 


Q ss_pred             ----hCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh---hc----CCCc
Q 014698          252 ----LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS---ID----LGLP  320 (420)
Q Consensus       252 ----~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~  320 (420)
                          +|++ ....+..+...+..++.+++..++-.|.++++..+....|..+...........+...   ..    ..+.
T Consensus       316 ~~~~~g~~-vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~  394 (498)
T COG3104         316 NRQIFGFE-VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSV  394 (498)
T ss_pred             ccccccee-cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCH
Confidence                2222 3456777888888888888888888887766544433344433333322222222222   11    1234


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHH------HhccCCceeeeehhhh
Q 014698          321 HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGY------LLDSTHSWSMSLFAPS  394 (420)
Q Consensus       321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~------l~~~~~~~~~~~~~~~  394 (420)
                      .+.+...++.+++--...+.....+.+..|+...+.+++........+..++..+.+.      ..+.. .....|...+
T Consensus       395 ~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~-~~~~~F~~~g  473 (498)
T COG3104         395 WWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAF-IEGRVFGTIG  473 (498)
T ss_pred             HHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhh-hhhhhHHHHH
Confidence            5556666788888888888888888888999888888888776666666666665552      22221 3444666666


Q ss_pred             HHHHHHHHHHhhhc
Q 014698          395 IFFYLTGTIVWLAF  408 (420)
Q Consensus       395 ~~~~~~~~~~~~~~  408 (420)
                      ....+.....+...
T Consensus       474 ~v~i~~~~~~~~~~  487 (498)
T COG3104         474 VVAIVIGILLLLLS  487 (498)
T ss_pred             HHHHHHHHHHHHhh
Confidence            55555555444433

>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.67  E-value=2.5e-15  Score=141.04  Aligned_cols=232  Identities=13%  Similarity=0.133  Sum_probs=174.7

Q ss_pred             chhhhcchhHHHHHHHHHHHHHHHHHHHh------------h-------c---------------------------h--
Q 014698           56 PLLFVTWIRKVLQTGVLIWSLATALLPLL------------A-------G---------------------------F--   87 (420)
Q Consensus        56 p~~~~~~~r~~~~~~~~~~~~~~~~~~~~------------~-------~---------------------------~--   87 (420)
                      ..+.|..|.|++-+|.++.+++++++++-            .       +                           .  
T Consensus       154 YfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~  233 (735)
T KOG3626|consen  154 YFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKEST  233 (735)
T ss_pred             HhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCC
Confidence            33556668889999999999999887641            0       0                           0  


Q ss_pred             --HH-HHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhcc-------------
Q 014698           88 --MP-GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-------------  151 (420)
Q Consensus        88 --~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-------------  151 (420)
                        ++ .++.+.++.|+|....++...+|+-|...+++-+..+|+......+|.++|.++++++...+             
T Consensus       234 ~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~  313 (735)
T KOG3626|consen  234 SYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPT  313 (735)
T ss_pred             chhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCC
Confidence              22 57789999999999999999999999999999999999999999999999999999887522             


Q ss_pred             ------chhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhh-hhhhhhhcc--cccccchhhhhhcHH
Q 014698          152 ------GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSL-SASLEEMGE--SLKDVPWKAIFRSKA  222 (420)
Q Consensus       152 ------gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~  222 (420)
                            -|..-|++.+.+.++..+..+++|++.++..++....+....+++.. .....+..+  ++-....+++++||.
T Consensus       314 DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~i  393 (735)
T KOG3626|consen  314 DPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPI  393 (735)
T ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCch
Confidence                  27777888888888888899999988776543211111000000000 000000000  011233678899999


Q ss_pred             HHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHH-HHHHHHHhhhhhhhhhhhc
Q 014698          223 VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPL-ASVLVTSIAAQFADNLIAT  287 (420)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~  287 (420)
                      +....+...+....+.++.+++|.|+++++|.++..+..+.....+ +..+|.+++|++.+|+..+
T Consensus       394 f~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~  459 (735)
T KOG3626|consen  394 FMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS  459 (735)
T ss_pred             HHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence            9999999999999999999999999999999999999998866666 4557778999999998754

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=99.64  E-value=1.8e-17  Score=155.32  Aligned_cols=323  Identities=15%  Similarity=0.188  Sum_probs=3.0

Q ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHHh-------------------------h------------------------chH
Q 014698           58 LFVTWIRKVLQTGVLIWSLATALLPLL-------------------------A------------------------GFM   88 (420)
Q Consensus        58 ~~~~~~r~~~~~~~~~~~~~~~~~~~~-------------------------~------------------------~~~   88 (420)
                      +.+..|.|++-.|.++.++++++++.-                         .                        .-+
T Consensus        62 g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (539)
T PF03137_consen   62 GGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYF  141 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             hhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHH
Confidence            566567788888888888888876530                         0                        013


Q ss_pred             HHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhcc-----------------
Q 014698           89 PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-----------------  151 (420)
Q Consensus        89 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-----------------  151 (420)
                      ..++++.++.|+|.+..++...+|+-|.+++++-+..+|+..+...+|.++|.++++.+.+.+                 
T Consensus       142 ~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~d  221 (539)
T PF03137_consen  142 YVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSD  221 (539)
T ss_dssp             ----------SSS-------------------------------------------------------------------
T ss_pred             HHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCC
Confidence            568889999999999999999999999999999999999999999999999999998776421                 


Q ss_pred             -----chhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhh-hhhhhhhhh--------hcccccccchhhh
Q 014698          152 -----GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMK-KSLSASLEE--------MGESLKDVPWKAI  217 (420)
Q Consensus       152 -----gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--------~~~~~~~~~~~~~  217 (420)
                           .|..-|.+.+...++..+..+.+|++-|..++.+.+++....++ +...+..++        ..-+.-....+++
T Consensus       222 p~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~L  301 (539)
T PF03137_consen  222 PRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRL  301 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHH
Confidence                 26667777888877777888888887665521111111100000 000000000        0111222346789


Q ss_pred             hhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHH-HHHHHHHhhhhhhhhhhhcCcchHHHHH
Q 014698          218 FRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPL-ASVLVTSIAAQFADNLIATGVETTMVRK  296 (420)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~~~~~~~~~~  296 (420)
                      ++||.+....+..........++.++.|.|++.+++.++.+++++.....+ +.++|.+++|.+.+|++-+...   .-+
T Consensus       302 l~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~---~~~  378 (539)
T PF03137_consen  302 LTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARG---AAK  378 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHH---HHH
Confidence            999999999999999999999999999999999999999999988866665 6668888999999999754211   011


Q ss_pred             HHHHHHHHHhHHHHHHHhh------------cC---------------------------------CC---cHH-HHHHH
Q 014698          297 ICQTIAFLSPAVCMTLSSI------------DL---------------------------------GL---PHW-EIVGI  327 (420)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~------------~~---------------------------------~~---~~~-~~~~~  327 (420)
                      .......+........+..            ..                                 ..   ... ..+..
T Consensus       379 ~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~  458 (539)
T PF03137_consen  379 FCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILL  458 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHH
Confidence            1111111111110111100            00                                 00   001 11122


Q ss_pred             HHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhh-hhHHHHHHHHHHHhccC
Q 014698          328 LTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGA-VPGIVGVALTGYLLDST  383 (420)
Q Consensus       328 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~-~g~~~~~~~~g~l~~~~  383 (420)
                      ++..+..+....+........+++++|+.|.|+...+.+ +|.+-+|.++|.+.|..
T Consensus       459 ~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t  515 (539)
T PF03137_consen  459 FILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST  515 (539)
T ss_dssp             ---------------------------------------------------------
T ss_pred             HHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence            222333344445555566677999999999999987766 68899999999999974

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]

Probab=99.59  E-value=2.5e-13  Score=124.48  Aligned_cols=316  Identities=17%  Similarity=0.101  Sum_probs=212.3

Q ss_pred             hhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhcc--ccchhhhHHHHHhcCCccc
Q 014698           44 LKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGE--GVSPSAATDLIARSIPLEE  121 (420)
Q Consensus        44 ~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~--~~~~~~~~~~i~~~~~~~~  121 (420)
                      .....+.+..-+-+.|+++||..+........+......+ .. +|.++    +.|+..  +.......++++|...+++
T Consensus        72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~-~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~  145 (463)
T KOG2816|consen   72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLF-QG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEE  145 (463)
T ss_pred             HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHH-HH-HHHhh----hcccccchhhhhhhhhhheeeccchhH
Confidence            3344455666666689999999999999888888777654 33 33333    555433  3566677899999999999


Q ss_pred             cchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHH-HHHhhhcccCcccCCCCcCccchhhhhhhhhhh
Q 014698          122 RSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW-FSGFKILQEGETSNGATLAPRSNYINMKKSLSA  200 (420)
Q Consensus       122 r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (420)
                      |....|+.+.....+..++|.+++.+.+..|.-.+|.+..+..++. .....++||+.++++++..+.......... ..
T Consensus       146 R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~-~~  224 (463)
T KOG2816|consen  146 RSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSLD-SS  224 (463)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCccc-ch
Confidence            9999999999999999999999999999999999999988888775 455667777655443331110000000000 00


Q ss_pred             hhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhh-hhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhh-
Q 014698          201 SLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS-WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAA-  278 (420)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g-  278 (420)
                           ...+.....+..-++|..+.+.+..+........-.. ..+.|+...++++..+.+.+.+..+....+++.+.. 
T Consensus       225 -----~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~  299 (463)
T KOG2816|consen  225 -----HVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLP  299 (463)
T ss_pred             -----hhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 0000000011122245555555555554444433223 558888889999999999999999999999988766 


Q ss_pred             hhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHH
Q 014698          279 QFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILL  358 (420)
Q Consensus       279 ~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~  358 (420)
                      .+...++.+         ..+..+...-........+..+ . +................+..........+++++|++.
T Consensus       300 ~l~~~l~~~---------~~i~lGl~~~~~~~~~~af~~~-~-w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~  368 (463)
T KOG2816|consen  300 LLSSILGEK---------RLISLGLLSEFLQLLLFAFATE-T-WMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVF  368 (463)
T ss_pred             HHHHHHhhh---------hHhhHHHHHHHHHHHHHHHhcc-c-hhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchh
Confidence            666666643         2555666666666666555443 2 2322233334444445666666677778999999999


Q ss_pred             HHHHHhhhhhHHHHHHHHHHHhcc
Q 014698          359 GITNTVGAVPGIVGVALTGYLLDS  382 (420)
Q Consensus       359 g~~~~~~~~g~~~~~~~~g~l~~~  382 (420)
                      ++...+..+.+.++|.+.+.++..
T Consensus       369 ~~is~i~~l~~~~~~~~~~~i~~~  392 (463)
T KOG2816|consen  369 GIISGIEGLSGVVSPALYGNIFAL  392 (463)
T ss_pred             hHHHHHHHHhhhhhHHHHHHHHHH
Confidence            999999999999999999998754

>PRK10054 putative transporter; Provisional

Probab=99.58  E-value=1e-13  Score=127.48  Aligned_cols=177  Identities=14%  Similarity=0.112  Sum_probs=127.6

Q ss_pred             cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698          220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ  299 (420)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~  299 (420)
                      +|+++.+.+..++...+.+....++|.|+++++|++..+.|+..+...+..++++++.|+++||+|+|       +  .+
T Consensus         6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k-------~--~~   76 (395)
T PRK10054          6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKK-------R--YM   76 (395)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc-------h--hH
Confidence            35567777788888888888899999999988999999999999999999999999999999999975       2  22


Q ss_pred             HHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698          300 TIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYL  379 (420)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l  379 (420)
                      ..+.....+........++ .........+.+.+.+...+.......+..|+++|+++.|+.+...++|..++|.+.+.+
T Consensus        77 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l  155 (395)
T PRK10054         77 LLAITAFASGFIAIPLVNN-VTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLL  155 (395)
T ss_pred             HHHHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2333333333333333222 222333333444444444444555566778899999999999999999999999999998


Q ss_pred             hccCCceeeeehhhhHHHHHHHHHHhhhc
Q 014698          380 LDSTHSWSMSLFAPSIFFYLTGTIVWLAF  408 (420)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (420)
                      .+ . +++..|...+++.++..+......
T Consensus       156 ~~-~-g~~~~f~~~~~~~~i~~i~~~~~~  182 (395)
T PRK10054        156 VM-Q-SINLPFWLAAICSAFPLVFIQIWV  182 (395)
T ss_pred             HH-h-ccCcHHHHHHHHHHHHHHHHHHHH
Confidence            86 3 688888877766655544444433

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.51  E-value=8.4e-13  Score=122.16  Aligned_cols=173  Identities=12%  Similarity=0.093  Sum_probs=124.3

Q ss_pred             cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhh-hhcCcchHHHHHHH
Q 014698          220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL-IATGVETTMVRKIC  298 (420)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~~~~~~~~~~  298 (420)
                      .+.++......+...+.+++...++|.|+++.+|+++.+++.+.........++.+++|+++||+ |+|        +..
T Consensus         8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr--------r~i   79 (493)
T PRK15462          8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR--------MAV   79 (493)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH--------HHH
Confidence            45667777778888889999999999999998999999999999999999999999999999999 864        333


Q ss_pred             HHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCcc--chHHHHHHHHHhhhhhHHHHHHHH
Q 014698          299 QTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPE--YASILLGITNTVGAVPGIVGVALT  376 (420)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~~~~~~  376 (420)
                       ..+.+...+...+............+.+.+...+.+...+.......+.+|++  +|.++.++.+...++|+.++|.+.
T Consensus        80 -liG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~  158 (493)
T PRK15462         80 -MLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIAC  158 (493)
T ss_pred             -HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHH
Confidence             33333333333222222111222333333444555544454555666777765  699999999999999999999999


Q ss_pred             HHHhccCCceeeeehhhhHHHHHHHH
Q 014698          377 GYLLDSTHSWSMSLFAPSIFFYLTGT  402 (420)
Q Consensus       377 g~l~~~~~~~~~~~~~~~~~~~~~~~  402 (420)
                      |++.+.. +|+..|...++.++++.+
T Consensus       159 g~L~~~~-Gw~~~F~iaaigm~l~li  183 (493)
T PRK15462        159 GYAQEEY-SWAMGFGLAAVGMIAGLV  183 (493)
T ss_pred             HHHHhhh-ChHHHHHHHHHHHHHHHH
Confidence            9999876 788888876654444333

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=99.50  E-value=3.3e-13  Score=104.93  Aligned_cols=129  Identities=28%  Similarity=0.416  Sum_probs=112.2

Q ss_pred             hHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccch
Q 014698           45 KDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR  124 (420)
Q Consensus        45 ~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~  124 (420)
                      ....++....+.+.||.+||+.+..+.....++.+.... .++++.+.+.+++.|++.+...+....++.|.+|+++|++
T Consensus         9 ~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   87 (141)
T TIGR00880         9 LGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFAL-SSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGV   87 (141)
T ss_pred             hHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhH
Confidence            344556777777789999999999999998888887765 7889999999999999999999999999999999999999


Q ss_pred             hhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhc
Q 014698          125 AVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL  174 (420)
Q Consensus       125 ~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~  174 (420)
                      ..++.+....+|..++|.+.+.+.+..+|++.|++.+...++..+...++
T Consensus        88 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (141)
T TIGR00880        88 ALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFL  137 (141)
T ss_pred             HHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhc
Confidence            99999999999999999999999998999999999888777655444443

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.50  E-value=9.6e-13  Score=123.52  Aligned_cols=170  Identities=10%  Similarity=0.102  Sum_probs=128.5

Q ss_pred             HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhh--hCCCcchhhHHHHhhHHHHHHHHHhhhhhhhh-hhhcCcchHHHHHH
Q 014698          221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE--LSLNLTEAAWVSILPPLASVLVTSIAAQFADN-LIATGVETTMVRKI  297 (420)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~~~~  297 (420)
                      +.++.+.+..++..+++++...++|.|+++.  +|++..+++.+.+...+...++.+++|+++|| +|+|         .
T Consensus        10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~---------~   80 (475)
T TIGR00924        10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTK---------K   80 (475)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchH---------H
Confidence            4456666777777899999999999999887  89999999999999999999999999999999 7853         3


Q ss_pred             HHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCcc---chHHHHHHHHHhhhhhHHHHHH
Q 014698          298 CQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPE---YASILLGITNTVGAVPGIVGVA  374 (420)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~g~~~~~~  374 (420)
                      .+..+.....+...+..... +.....+...+.+++.+...+.......+.+|++   +|+++.++.+...++|..++|.
T Consensus        81 ~l~~~~~~~~~g~~~~~~~~-~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~  159 (475)
T TIGR00924        81 TMVLGGIVLMLGHFMLAMSI-YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPL  159 (475)
T ss_pred             HHHHHHHHHHHHHHHHHhcc-cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHH
Confidence            34444444444444444332 2334444556677777766666666666667654   4888999999999999999999


Q ss_pred             HHHHHhccCCceeeeehhhhHHHHHHH
Q 014698          375 LTGYLLDSTHSWSMSLFAPSIFFYLTG  401 (420)
Q Consensus       375 ~~g~l~~~~~~~~~~~~~~~~~~~~~~  401 (420)
                      +.+++.++. +|+..|...++..+++.
T Consensus       160 l~g~l~~~~-g~~~~f~~~~~~~~~~~  185 (475)
T TIGR00924       160 LAGVIAENY-GYHVGFNLAAVGMVIGL  185 (475)
T ss_pred             HHHHHHHhc-ChHHHHHHHHHHHHHHH
Confidence            999999886 68888888665444443

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=99.50  E-value=1.1e-12  Score=118.91  Aligned_cols=165  Identities=19%  Similarity=0.254  Sum_probs=126.4

Q ss_pred             HHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhH
Q 014698          228 YAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPA  307 (420)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~  307 (420)
                      +..++............|.++.+++|.++.+.+++.+...++..++.++.|+++||+|+|        + ....+.....
T Consensus         3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r--------~-~l~~~~~~~~   73 (352)
T PF07690_consen    3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRR--------R-VLIIGLLLFA   73 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HH--------H-HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCe--------e-eEeehhhhhh
Confidence            445555666666677777667777899999999999999999999999999999999963        3 4444444444


Q ss_pred             HHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCcee
Q 014698          308 VCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWS  387 (420)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~  387 (420)
                      +...+..+. ++.+...+..++.|++.+...+.....+.+..|+++|+++.+..+....+|..++|.+.+.+.+.. +++
T Consensus        74 ~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-~~~  151 (352)
T PF07690_consen   74 LGSLLLAFA-SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF-GWR  151 (352)
T ss_dssp             HHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC-HHC
T ss_pred             hHHHHhhhh-hhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc-ccc
Confidence            442222222 334455566688888888788888888888899999999999999999999999999999999775 788


Q ss_pred             eeehhhhHHHHHHHHH
Q 014698          388 MSLFAPSIFFYLTGTI  403 (420)
Q Consensus       388 ~~~~~~~~~~~~~~~~  403 (420)
                      ..+++.++..++..++
T Consensus       152 ~~~~~~~~~~~~~~il  167 (352)
T PF07690_consen  152 WAFLISAILSLIAAIL  167 (352)
T ss_dssp             CHHHHHHHHHHHHHHH
T ss_pred             cccccccchhhhhhhh
Confidence            8888887777666654

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=99.49  E-value=1.5e-12  Score=119.90  Aligned_cols=174  Identities=13%  Similarity=0.156  Sum_probs=129.5

Q ss_pred             HHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHH
Q 014698          224 WAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAF  303 (420)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~  303 (420)
                      +......++...+.+....++|.|++++.|.|+.+.|+..+...+...+.+++.|+++||+++|         ..+..+.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k---------~~l~~~~   83 (400)
T PRK11646         13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAK---------PMIVTGM   83 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCch---------HHHHHHH
Confidence            4455677777888888889999999888899999999999999999999999999999999964         3334444


Q ss_pred             HHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698          304 LSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST  383 (420)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~  383 (420)
                      .............+ +.+...+..++.|++.+...+.......+..|+|+|+++.|+.+...++|..++|.+.|.+.+ .
T Consensus        84 ~~~~~~~~~~~~~~-~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~-~  161 (400)
T PRK11646         84 LMRAAGFATMAIAH-EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ-Y  161 (400)
T ss_pred             HHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h
Confidence            44444444443332 344445555667777665566666667777899999999999999999999999999999984 3


Q ss_pred             CceeeeehhhhHHHHHHHHHHhhhcc
Q 014698          384 HSWSMSLFAPSIFFYLTGTIVWLAFA  409 (420)
Q Consensus       384 ~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (420)
                       +++..|++.+...++..++.....+
T Consensus       162 -g~~~~f~~~~~~~~~~~i~~~~~~~  186 (400)
T PRK11646        162 -DFRLVCATGAVLFVLAAAFNAWLLP  186 (400)
T ss_pred             -hHHHHHHHHHHHHHHHHHHHHHhCC
Confidence             6887887766655554444333333

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=99.47  E-value=3.1e-12  Score=120.84  Aligned_cols=176  Identities=11%  Similarity=0.090  Sum_probs=125.0

Q ss_pred             hhhhcH-HHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhh-hhhcCcchHH
Q 014698          216 AIFRSK-AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN-LIATGVETTM  293 (420)
Q Consensus       216 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~  293 (420)
                      +.+|+| .++......++..++++....++|.|+++.+|++..+++..............+++|+++|| +|+|      
T Consensus        15 ~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r------   88 (500)
T PRK09584         15 NAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTK------   88 (500)
T ss_pred             hhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH------
Confidence            455666 47888888888899999999999999999999999988887776665555556789999999 5863      


Q ss_pred             HHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCcc--chHHHHHHHHHhhhhhHHH
Q 014698          294 VRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPE--YASILLGITNTVGAVPGIV  371 (420)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~  371 (420)
                         .....+.....+...+.....+......+...+.+++.+...+.......+.+|++  ++..+.++.+...++|..+
T Consensus        89 ---~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~  165 (500)
T PRK09584         89 ---RVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFF  165 (500)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHH
Confidence               33333433333333333333222333344456667777766666666666767654  3556888889999999999


Q ss_pred             HHHHHHHHhccCCceeeeehhhhHHHHHHH
Q 014698          372 GVALTGYLLDSTHSWSMSLFAPSIFFYLTG  401 (420)
Q Consensus       372 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~  401 (420)
                      +|.+.|++.|.. +|+..|.+.++...++.
T Consensus       166 gp~i~g~l~~~~-g~~~~F~i~~i~~~i~~  194 (500)
T PRK09584        166 SMLATPWLAAKY-GWSVAFALSVVGMLITV  194 (500)
T ss_pred             HHHHHHHHHHhh-CHHHHHHHHHHHHHHHH
Confidence            999999999986 78888888665444433

>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]

Probab=99.46  E-value=2.2e-12  Score=116.68  Aligned_cols=345  Identities=14%  Similarity=0.100  Sum_probs=199.7

Q ss_pred             hhHHhHHhhhhcchhhhcc-hhHHHHHHHHHHHHHHHHHHHh---hc-hHHHHHHHHHHHHhccccchhhhHHHHHhcCC
Q 014698           44 LKDTNLLELLRLPLLFVTW-IRKVLQTGVLIWSLATALLPLL---AG-FMPGLVLSRVLVGIGEGVSPSAATDLIARSIP  118 (420)
Q Consensus        44 ~~~~~~~~l~~~p~~~~~~-~r~~~~~~~~~~~~~~~~~~~~---~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~  118 (420)
                      ..+.++.++..+.+..+.+ -|+.++.+.++..++.++...+   .+ .-+.++++|++.|+|.+.. ....+|+++...
T Consensus        81 slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~  159 (488)
T KOG2325|consen   81 SLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRAYIADAST  159 (488)
T ss_pred             HHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHHHHHhccC
Confidence            3333344555555566666 4888999999999998876322   34 5788999999999996544 556899999988


Q ss_pred             ccccchhhHHHHhhhhhHHHHHHhhHHHhhhcc--c-----------hhHHHHHHHHHHHHH-HHHhhhcccCcccCCCC
Q 014698          119 LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL--G-----------WESVFYIFGLLGIAW-FSGFKILQEGETSNGAT  184 (420)
Q Consensus       119 ~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~--g-----------wr~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~  184 (420)
                      .++|.|+++....+..+|.++||.+...+....  |           +..+-|+.++..++. +++..++.|.++...++
T Consensus       160 ~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~  239 (488)
T KOG2325|consen  160 VEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDK  239 (488)
T ss_pred             ccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCcccc
Confidence            899999999999999999999998886655310  1           235567777777774 45556666665544333


Q ss_pred             cCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHH
Q 014698          185 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI  264 (420)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  264 (420)
                      +.+.++      +.+.+.  .+.+.++      +..+..+.+.+..+...+......+..+.+....++.+.+++-...+
T Consensus       240 ~~~~~~------~~~~~~--~~~~~~~------~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~g  305 (488)
T KOG2325|consen  240 KKRSVE------EEKSDI--EKVKKPK------LDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNG  305 (488)
T ss_pred             ccccch------hhccch--hhhccCC------hhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhh
Confidence            221110      000000  0000111      11233445555666666666666777777777778887776644433


Q ss_pred             h-hHHHHHHHHH-hhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHH-HHHhhcCCC----------------------
Q 014698          265 L-PPLASVLVTS-IAAQFADNLIATGVETTMVRKICQTIAFLSPAVCM-TLSSIDLGL----------------------  319 (420)
Q Consensus       265 ~-~~~~~~~~~~-~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----------------------  319 (420)
                      . ..+.+++... ......-|.++...     |..+...+........ .........                      
T Consensus       306 i~~~~~g~ls~~~~l~~~f~~l~~i~~-----r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~  380 (488)
T KOG2325|consen  306 ITLSISGILSVILLLLYIFTRLGKIDK-----RRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCD  380 (488)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhhcc-----ceeeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhc
Confidence            2 2222222222 22333334332100     2222222222211111 111110000                      


Q ss_pred             -----cHHH--HHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehh
Q 014698          320 -----PHWE--IVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFA  392 (420)
Q Consensus       320 -----~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~  392 (420)
                           +...  ....+.+|.+.-.......+...+...|++++++.|+.......+..++|.......... +++..+..
T Consensus       381 ~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~-g~~~v~~~  459 (488)
T KOG2325|consen  381 TTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLS-GPRPVWII  459 (488)
T ss_pred             cCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhc-CccHHHHH
Confidence                 0011  111233444444444455666777889999999999999999999999999999988886 67766666


Q ss_pred             hhHHHHHHHHHHhhhcc
Q 014698          393 PSIFFYLTGTIVWLAFA  409 (420)
Q Consensus       393 ~~~~~~~~~~~~~~~~~  409 (420)
                      ..+..+....+.....+
T Consensus       460 ~~~~~l~~~~l~~~~~~  476 (488)
T KOG2325|consen  460 LLCLLLVVAALWIVFLK  476 (488)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            55544444443333333

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=99.45  E-value=3.3e-12  Score=117.95  Aligned_cols=308  Identities=17%  Similarity=0.141  Sum_probs=177.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHhccccchhhhHHHHHhcCC--ccccchhhHHHHhhhhhHH
Q 014698           63 IRKVLQTGVLIWSLATALLPLLA---GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIP--LEERSRAVSFVFGGLSFGS  137 (420)
Q Consensus        63 ~r~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~g~  137 (420)
                      ||+-++++.++..++....+..+   .+.....+.-++..+|.+.....+.++..|...  +++|+...+.......+|.
T Consensus        58 r~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~  137 (433)
T PF03092_consen   58 RKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGS  137 (433)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHH
Confidence            45556666666655555444433   356667777788889999999999999999983  3447888889999999999


Q ss_pred             HHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhh
Q 014698          138 VAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAI  217 (420)
Q Consensus       138 ~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (420)
                      +++..++|.+.+..++|..|.+.+++..+..+...+++|+++..+..+......+ ..+......+     +.....++.
T Consensus       138 lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~l~~~  211 (433)
T PF03092_consen  138 LVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEERKVRPADEVFSFGKE-EVPCLFGSFR-----EQLSELWRA  211 (433)
T ss_pred             HHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhhccccccchhhccccc-ccchhhHHHH-----HHHHHHHHH
Confidence            9999999999999999999999888877765555555554222111110000000 0000000001     111224567


Q ss_pred             hhcHHHHHHHH-HHHHhHHHHHHHhhhhhhHhhhhhC---CCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHH
Q 014698          218 FRSKAVWAMIY-AHFCGSWGHYTCLSWLPTYFSEELS---LNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTM  293 (420)
Q Consensus       218 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~  293 (420)
                      +++|.++...+ ..++............-.+..+..+   +|+...+.+..+..++.+++..+..+...+..        
T Consensus       212 ~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~--------  283 (433)
T PF03092_consen  212 LQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWS--------  283 (433)
T ss_pred             HhhhHHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--------
Confidence            77788877665 2222222111111101112223345   77777777665555555655555443333322        


Q ss_pred             HHHHHHHHHHHHhHHHHHHHhhcC--------CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhh
Q 014698          294 VRKICQTIAFLSPAVCMTLSSIDL--------GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVG  365 (420)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~  365 (420)
                      .|+......++.....+.-.....        +.......--++..........+......+..|+..-|+..++..++.
T Consensus       284 ~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~  363 (433)
T PF03092_consen  284 WRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFS  363 (433)
T ss_pred             HHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHH
Confidence            144444433333322222111100        011111111233334444444555566677889999999999999999


Q ss_pred             hhhHHHHHHHHHHHhccCC
Q 014698          366 AVPGIVGVALTGYLLDSTH  384 (420)
Q Consensus       366 ~~g~~~~~~~~g~l~~~~~  384 (420)
                      ++|..++..++..+.+..+
T Consensus       364 Nlg~~~s~~lg~~l~~~~~  382 (433)
T PF03092_consen  364 NLGSSVSSTLGAFLMELFG  382 (433)
T ss_pred             HHHHHHHHHHHHHHHHHcC
Confidence            9999999999998887653

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.45  E-value=4.2e-12  Score=119.25  Aligned_cols=166  Identities=11%  Similarity=0.129  Sum_probs=126.1

Q ss_pred             cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhh-hhhcCcchHHHHHHH
Q 014698          220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN-LIATGVETTMVRKIC  298 (420)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~~~~~  298 (420)
                      .|.++......+...+++|+...+++.|+++.+|.+..+++++...+.....+..+++|+++|| +|||         ..
T Consensus        13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r---------~~   83 (489)
T PRK10207         13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTK---------RT   83 (489)
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchH---------HH
Confidence            3566777778888899999999999999999999999999888888887777888899999999 8963         33


Q ss_pred             HHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCcc--chHHHHHHHHHhhhhhHHHHHHHH
Q 014698          299 QTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPE--YASILLGITNTVGAVPGIVGVALT  376 (420)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~~~~~~  376 (420)
                      ...+.....+.........+......+...+.+++.+...+.......+.+|++  +|+.+.++.+...++|..++|.+.
T Consensus        84 ~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~  163 (489)
T PRK10207         84 IVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLA  163 (489)
T ss_pred             HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHH
Confidence            333433333333333333222223334556678888877777777777888876  457899999999999999999999


Q ss_pred             HHHhccCCceeeeehhhhH
Q 014698          377 GYLLDSTHSWSMSLFAPSI  395 (420)
Q Consensus       377 g~l~~~~~~~~~~~~~~~~  395 (420)
                      |++.++. +|+..|++.++
T Consensus       164 g~l~~~~-gw~~~F~i~~i  181 (489)
T PRK10207        164 PVIADKF-GYSVTYNLCGA  181 (489)
T ss_pred             HHHHHhh-ChHHHHHHHHH
Confidence            9999987 78888887654

>PRK11663 regulatory protein UhpC; Provisional

Probab=99.44  E-value=2.9e-12  Score=119.54  Aligned_cols=177  Identities=11%  Similarity=0.015  Sum_probs=125.7

Q ss_pred             HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHH
Q 014698          221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT  300 (420)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~  300 (420)
                      +.++...+..++.+..........|.+.++ +|.+..+.+++.+...++..+++++.|++.||+|+|         ....
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r---------~~~~   92 (434)
T PRK11663         23 HILITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNAR---------YFMG   92 (434)
T ss_pred             HHHHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCc---------hhHH
Confidence            334444555555555555667788888876 799999999999999999999999999999999964         2333


Q ss_pred             HHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHh
Q 014698          301 IAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL  380 (420)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~  380 (420)
                      .+.....+...+..... +.....+..++.|++.+...+.......+.+|+++|+++.|+.+....+|..++|.+.+.+.
T Consensus        93 ~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~  171 (434)
T PRK11663         93 IGLIATGIINILFGFSS-SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIA  171 (434)
T ss_pred             HHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44444444433333322 23333333455677776666666666777788899999999999999999999999999999


Q ss_pred             ccCCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698          381 DSTHSWSMSLFAPSIFFYLTGTIVWLAFA  409 (420)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (420)
                      +.. +|+..|.+.++..++......+..+
T Consensus       172 ~~~-gw~~~f~~~~i~~~~~~~~~~~~~~  199 (434)
T PRK11663        172 LHY-GWRYGMMIAGIIAIVVGLFLCWRLR  199 (434)
T ss_pred             Hcc-cHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            886 7988888876655544444433333

>PRK10489 enterobactin exporter EntS; Provisional

Probab=99.44  E-value=1.9e-12  Score=120.30  Aligned_cols=179  Identities=14%  Similarity=-0.041  Sum_probs=126.2

Q ss_pred             hhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHH
Q 014698          214 WKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTM  293 (420)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~  293 (420)
                      ++.+.|+|.++...+..++..++........|.+.++. +.++.+.|++.+...++..+++++.|+++||+++|+.    
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~----   84 (417)
T PRK10489         10 LSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMM-TGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKL----   84 (417)
T ss_pred             HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceE----
Confidence            44555688888887787887888777788889888764 7799999999999999999999999999999997632    


Q ss_pred             HHHHHHHHHHHHhHHHHHH---Hhh-cCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhH
Q 014698          294 VRKICQTIAFLSPAVCMTL---SSI-DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPG  369 (420)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~  369 (420)
                         ..  .+....+.....   ... ..++.....+..++.|++.+...+.......+..|+++++++.++.+...++|.
T Consensus        85 ---l~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  159 (417)
T PRK10489         85 ---IL--LARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGS  159 (417)
T ss_pred             ---EE--ehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHH
Confidence               11  111111111111   111 122223333444556666665555556666777889999999999999999999


Q ss_pred             HHHHHHHHHHhccCCceeeeehhhhHHHHHHHHH
Q 014698          370 IVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTI  403 (420)
Q Consensus       370 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~  403 (420)
                      .+||.+.+.+.+.. ++++.+.+.+...++..+.
T Consensus       160 ~~g~~l~g~l~~~~-~~~~~~~~~~~~~~~~~~~  192 (417)
T PRK10489        160 VISPALGGLLIAAG-GVAWNYGLAAAGTFITLLP  192 (417)
T ss_pred             HhHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHH
Confidence            99999999999875 6777777665554444433

>PRK10504 putative transporter; Provisional

Probab=99.42  E-value=1.1e-11  Score=117.22  Aligned_cols=178  Identities=14%  Similarity=0.158  Sum_probs=132.7

Q ss_pred             cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698          220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ  299 (420)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~  299 (420)
                      ++.++...+..++.....+....+.|.+.++ +|.++.+.++..+...++..++.++.|+++||+|+|       | .. 
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r-------~-~~-   78 (471)
T PRK10504          9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVR-------N-IF-   78 (471)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchH-------H-HH-
Confidence            3567777777888777888888899999876 699999999999998899999999999999999964       2 22 


Q ss_pred             HHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698          300 TIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYL  379 (420)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l  379 (420)
                      ..+......+....... ++.....+..++.|++.+...+.......+..|+++|+++.|+.+...++|..++|.+.|.+
T Consensus        79 ~~~~~~~~~~~~~~~~~-~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l  157 (471)
T PRK10504         79 FTAIVLFTLGSLFCALS-GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLL  157 (471)
T ss_pred             HHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence            23333333333333333 23444455567788888877766666677778999999999999999999999999999999


Q ss_pred             hccCCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698          380 LDSTHSWSMSLFAPSIFFYLTGTIVWLAFA  409 (420)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (420)
                      .+.. +|+..|.+......+.........+
T Consensus       158 ~~~~-gw~~~f~~~~~~~~l~~~~~~~~~~  186 (471)
T PRK10504        158 VEYA-SWHWIFLINIPVGIIGAIATLMLMP  186 (471)
T ss_pred             Hhhc-cHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            9986 7888888766555555544444433

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=99.42  E-value=1.2e-11  Score=117.46  Aligned_cols=175  Identities=13%  Similarity=0.151  Sum_probs=129.3

Q ss_pred             HHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHH
Q 014698          225 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL  304 (420)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~  304 (420)
                      ...+..+.............|.+.++ +|.++.+.++..+...++..++.++.|++.||+|||         .....+..
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r---------~~~~~~~~   75 (485)
T TIGR00711         6 VLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTR---------RLFLISTF   75 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcH---------HHHHHHHH
Confidence            34445555555556666677877765 699999999999999999999999999999999964         33333333


Q ss_pred             HhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCC
Q 014698          305 SPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTH  384 (420)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~  384 (420)
                      ...+......... +.....+..++.|++.+...+.......+..|+++|+++.++......+|..++|.+.+.+.++. 
T Consensus        76 ~~~~~~~~~~~~~-~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-  153 (485)
T TIGR00711        76 AFTLGSLLCGVAP-NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY-  153 (485)
T ss_pred             HHHHHHHHHhCcC-CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc-
Confidence            3333333333332 34455555677788888777777777888889999999999999999999999999999999885 


Q ss_pred             ceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698          385 SWSMSLFAPSIFFYLTGTIVWLAFASS  411 (420)
Q Consensus       385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (420)
                      +|+..|++.+...++...+.+...+++
T Consensus       154 ~w~~~f~~~~~~~~~~~~~~~~~~~~~  180 (485)
T TIGR00711       154 HWRWIFLINVPIGIIVVVVAFFILPRD  180 (485)
T ss_pred             CceehhhhhhHHHHHHHHHHHHHcCCc
Confidence            788888887766665555555554443

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=99.42  E-value=1.8e-11  Score=108.38  Aligned_cols=178  Identities=17%  Similarity=0.147  Sum_probs=149.0

Q ss_pred             cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698          220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ  299 (420)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~  299 (420)
                      ...++.+.+..|......+.....+|...+| +|.|..++|+..+.+..+..++.++...+.||+.||         ..+
T Consensus        12 ~~~l~aLa~~~F~igttEfv~~gLLp~iA~d-l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr---------~lL   81 (394)
T COG2814          12 WLALLALALAAFAIGTTEFVPVGLLPPIAAD-LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERR---------RLL   81 (394)
T ss_pred             hHHHHHHHHHHHHHHhHHHHHHhchHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchH---------HHH
Confidence            4566777888888899999999999999987 699999999999999999999999999999999853         444


Q ss_pred             HHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698          300 TIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYL  379 (420)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l  379 (420)
                      .....+..+.-.+....++ .....+.=++.++..+.+.........+.+||++|+++.++......++..+|.+++.++
T Consensus        82 l~~l~lFi~~n~l~alAp~-f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~i  160 (394)
T COG2814          82 LGLLALFIVSNLLSALAPS-FAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFL  160 (394)
T ss_pred             HHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHH
Confidence            4444444555555554433 444455558889999988888888888889999999999999999999999999999999


Q ss_pred             hccCCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698          380 LDSTHSWSMSLFAPSIFFYLTGTIVWLAFA  409 (420)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (420)
                      -|.. +|+.+|...+.+.+++.+..+...+
T Consensus       161 g~~~-GWR~~F~~ia~l~ll~~~~~~~~lP  189 (394)
T COG2814         161 GQLF-GWRATFLAIAVLALLALLLLWKLLP  189 (394)
T ss_pred             HHHh-hHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            9997 8999999999988888888887777

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=99.41  E-value=8.4e-12  Score=114.78  Aligned_cols=175  Identities=15%  Similarity=0.069  Sum_probs=123.3

Q ss_pred             HHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHH
Q 014698          225 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL  304 (420)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~  304 (420)
                      ....................|.+.+ ++|.++.+.++..+...++..++.++.|++.||+|+|        +.. ..+..
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r--------~~~-~~~~~   78 (385)
T TIGR00710         9 LLGCLSILGPLGIDMYLPAFPEIAA-DLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRR--------PVL-LLGLF   78 (385)
T ss_pred             HHHHHHHHHHHHHHHhcccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh--------HHH-HHHHH
Confidence            3333334444455555556666655 5799999999999999999999999999999999964        222 23333


Q ss_pred             HhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCC
Q 014698          305 SPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTH  384 (420)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~  384 (420)
                      ...+........ ++.....+..++.|++.+...+.......+..|+++|+++.+..+....+|..++|.+.+.+.+.. 
T Consensus        79 ~~~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-  156 (385)
T TIGR00710        79 IFALSSLGLALS-NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL-  156 (385)
T ss_pred             HHHHHHHHHHHH-ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-
Confidence            333333333332 224444455567787777677777777777789999999999999999999999999999999875 


Q ss_pred             ceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698          385 SWSMSLFAPSIFFYLTGTIVWLAFASS  411 (420)
Q Consensus       385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (420)
                      +++..+.+.++..++..+..+...+++
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (385)
T TIGR00710       157 SWHAIFAFLSLAGILLSALIFFILPET  183 (385)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            788778777666655555555444443

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=99.41  E-value=2e-11  Score=115.70  Aligned_cols=177  Identities=11%  Similarity=0.066  Sum_probs=129.0

Q ss_pred             HHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHH
Q 014698          223 VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA  302 (420)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~  302 (420)
                      +....+..+....-......-+|.+.++ +|.+..+.++..+.+.++...+.+..|+++||+|||         ..+..+
T Consensus         8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk---------~~l~~~   77 (495)
T PRK14995          8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFK---------RLLMLG   77 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH---------HHHHHH
Confidence            3445556666666666677788888765 699999999999999999999999999999999964         333444


Q ss_pred             HHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhcc-CccchHHHHHHHHHhhhhhHHHHHHHHHHHhc
Q 014698          303 FLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDI-SPEYASILLGITNTVGAVPGIVGVALTGYLLD  381 (420)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~  381 (420)
                      .....+......... +....++.-++.|++.+...+.......+.+ |+++|+++.|+......+|..+||.+.|.+.+
T Consensus        78 ~~~~~~~~~~~~~a~-~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~  156 (495)
T PRK14995         78 GTLFGLASLAAAFSP-TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE  156 (495)
T ss_pred             HHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            444444444444332 3444455557778887766665555565665 67899999999999999999999999999999


Q ss_pred             cCCceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698          382 STHSWSMSLFAPSIFFYLTGTIVWLAFASS  411 (420)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (420)
                      +. +|++.|++...+.++...+.....+++
T Consensus       157 ~~-gwr~~f~i~~~~~~~~~~l~~~~l~~~  185 (495)
T PRK14995        157 HF-YWGSVFLINVPIVLVVMGLTARYVPRQ  185 (495)
T ss_pred             cC-ChHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            86 799888887666665555555555543

>TIGR00900 2A0121 H+ Antiporter protein

Probab=99.40  E-value=7.3e-12  Score=114.22  Aligned_cols=170  Identities=14%  Similarity=0.096  Sum_probs=122.2

Q ss_pred             HHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHH
Q 014698          226 MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLS  305 (420)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~  305 (420)
                      .....++...+.......+|.|..+ .+.++.+.+++.+...++..++.++.|+++||+|||        +.........
T Consensus         4 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r--------~~~~~~~~~~   74 (365)
T TIGR00900         4 LFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRK--------KVMIGADLIR   74 (365)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchh--------HHHHHHHHHH
Confidence            4455566666666777788888877 589999999999999999999999999999999964        2322222222


Q ss_pred             hHHHHHHHhhc--C-CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc
Q 014698          306 PAVCMTLSSID--L-GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS  382 (420)
Q Consensus       306 ~~~~~~~~~~~--~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~  382 (420)
                      ...........  . .+.+...+..++.|++.+...+.......+..|+++|+++.|..+....+|..++|.+.+.+.+.
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~  154 (365)
T TIGR00900        75 AVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYAT  154 (365)
T ss_pred             HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            22222211111  1 13444455567778888777777777777888999999999999999999999999999999987


Q ss_pred             CCceeeeehhhhHHHHHHHHHHh
Q 014698          383 THSWSMSLFAPSIFFYLTGTIVW  405 (420)
Q Consensus       383 ~~~~~~~~~~~~~~~~~~~~~~~  405 (420)
                      . +++..+++.++..++.....+
T Consensus       155 ~-g~~~~~~~~~~~~~~~~~~~~  176 (365)
T TIGR00900       155 L-GIKWAIWVDAVGFAISALLIV  176 (365)
T ss_pred             h-hHHHHHHHHHHHHHHHHHHHH
Confidence            5 788777776655544444333

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=99.40  E-value=2.1e-11  Score=112.81  Aligned_cols=177  Identities=14%  Similarity=0.078  Sum_probs=125.7

Q ss_pred             HHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHH
Q 014698          224 WAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAF  303 (420)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~  303 (420)
                      ....+.+++............| .+++++|.+..+.++..+...++..+++++.|++.||+|+|         ..+..+.
T Consensus        11 ~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r---------~~~~~~~   80 (412)
T TIGR02332        11 IFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGAR---------RWIAGIM   80 (412)
T ss_pred             HHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChH---------HHHHHHH
Confidence            3334444444444444555555 66777899999999999999999999999999999999964         3334444


Q ss_pred             HHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc-
Q 014698          304 LSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS-  382 (420)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-  382 (420)
                      +...+........++ .....+.-++.|++.+...+.......+.+|+++|+++.|+.+....+|..+++.+.+.+.+. 
T Consensus        81 ~~~~~~~~~~~~~~~-~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~  159 (412)
T TIGR02332        81 VLWGIASTATMFATG-PESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALD  159 (412)
T ss_pred             HHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            444444444433332 444555557788888877666666667778999999999999999999999999999988752 


Q ss_pred             ----CCceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698          383 ----THSWSMSLFAPSIFFYLTGTIVWLAFASS  411 (420)
Q Consensus       383 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (420)
                          ..+|+..|.+.++..++...+.++..+++
T Consensus       160 ~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~  192 (412)
T TIGR02332       160 GLMALKGWQWLFLLEGFPSVILGVMTWFWLDDS  192 (412)
T ss_pred             CCCCccchhHHHHHHHHHHHHHHHHHhhccCCC
Confidence                13788899887766655555555555443

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>PRK03545 putative arabinose transporter; Provisional

Probab=99.40  E-value=1.6e-11  Score=113.04  Aligned_cols=175  Identities=11%  Similarity=0.037  Sum_probs=121.0

Q ss_pred             HHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHH
Q 014698          223 VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA  302 (420)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~  302 (420)
                      ++...+..+......+......|.+.+ ++|.++.+.++..+...++..++++..|.+.||+|+|         ..+..+
T Consensus        11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~-~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r---------~~~~~~   80 (390)
T PRK03545         11 VVTLALAAFIFNTTEFVPVGLLSDIAQ-SFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERR---------KLLIGL   80 (390)
T ss_pred             HHHHHHHHHHHHhHHHHHHcchHHHHh-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH---------HHHHHH
Confidence            344444444433333333445666554 5799999999999999999999999999999999963         333334


Q ss_pred             HHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc
Q 014698          303 FLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS  382 (420)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~  382 (420)
                      .....+........+ +.....+.-++.|.+.+...+.......+..|+|+|+++.|+......+|..++|.+.+.+.+.
T Consensus        81 ~~~~~~~~~~~~~~~-~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~  159 (390)
T PRK03545         81 FVLFIASHVLSALAW-NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQY  159 (390)
T ss_pred             HHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence            444444433333332 2444444446667776655566666667778999999999999999999999999999999887


Q ss_pred             CCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698          383 THSWSMSLFAPSIFFYLTGTIVWLAFA  409 (420)
Q Consensus       383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (420)
                      . +|+..|.+.++..++.....+...+
T Consensus       160 ~-gw~~~f~~~~~~~~l~~~~~~~~~~  185 (390)
T PRK03545        160 L-GWRTTFLAIGGGALITLLLLIKLLP  185 (390)
T ss_pred             h-cHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            6 7888888877766555544444333

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=99.40  E-value=1.9e-11  Score=111.62  Aligned_cols=173  Identities=14%  Similarity=0.157  Sum_probs=117.6

Q ss_pred             HHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHH
Q 014698          222 AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTI  301 (420)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~  301 (420)
                      .++...+..+......+....+.|.++++++|.|+.+.++..+...++..++.++.|+++||+|+|        +. +..
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r--------~~-~~~   72 (366)
T TIGR00886         2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPR--------YT-TTL   72 (366)
T ss_pred             chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCch--------HH-HHH
Confidence            345566666666777777888899878888999999999999999999999999999999999964        22 333


Q ss_pred             HHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc
Q 014698          302 AFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD  381 (420)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~  381 (420)
                      +.....+..........+.....+..++.|++.+ ........+.+..|+++|+++.++.....++|..+++.+.+.+.+
T Consensus        73 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~  151 (366)
T TIGR00886        73 SLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG  151 (366)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            3333333333333332123334444566676644 344455566677888999999999998888888888888776664


Q ss_pred             c---------CCceeeee-hhhhHHHHHHHHHH
Q 014698          382 S---------THSWSMSL-FAPSIFFYLTGTIV  404 (420)
Q Consensus       382 ~---------~~~~~~~~-~~~~~~~~~~~~~~  404 (420)
                      .         ..+|+..+ ...++...+...+.
T Consensus       152 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~  184 (366)
T TIGR00886       152 SLIFGAGLPAHLAWGWAFVIVPAGILLLPALLI  184 (366)
T ss_pred             HHHhcccccccccccchhHHHHHHHHHHHHHHH
Confidence            2         12577777 33333333333333

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.39  E-value=6.6e-12  Score=116.75  Aligned_cols=183  Identities=13%  Similarity=0.133  Sum_probs=116.1

Q ss_pred             hhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHH
Q 014698          216 AIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVR  295 (420)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~  295 (420)
                      +.+|+|++|...+..++...+......++|.|+++++|+++.+.|+..+...++..+++++.|+++||+|+|       |
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r-------~   77 (420)
T PRK09528          5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLK-------K   77 (420)
T ss_pred             hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-------H
Confidence            456688999998888888888888899999999998999999999999999999999999999999999975       3


Q ss_pred             HHHHHHHHHHhHHH-HHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhh---hhhhhccCccchHHHHHHHHHhhhhhHHH
Q 014698          296 KICQTIAFLSPAVC-MTLSSIDLGLPHWEIVGILTAGLALSSFALSGL---YCTHQDISPEYASILLGITNTVGAVPGIV  371 (420)
Q Consensus       296 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~g~~~g~~~~~~~~g~~~  371 (420)
                      .............. .....................++..+.......   ....++. +++++...|..+....+|..+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~i  156 (420)
T PRK09528         78 HLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERV-SRRSGFEYGRARMWGSLGWAL  156 (420)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHH-HhhccccchhhHHhhhHHHHH
Confidence            32221111111111 111100000000011111222222221111111   1111222 345677888888889999999


Q ss_pred             HHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhc
Q 014698          372 GVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAF  408 (420)
Q Consensus       372 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (420)
                      +|.+.|.+.+.  +++..|++.++..++...+.+...
T Consensus       157 ~~~~~g~l~~~--~~~~~f~~~~~~~~~~~~~~~~~~  191 (420)
T PRK09528        157 CAFIAGILFNI--NPQINFWLGSGSALILLVLLFFAK  191 (420)
T ss_pred             HHHHHHHHHhc--CchHhHHHHHHHHHHHHHHHhccc
Confidence            99999999875  566777776655555544444433

>PRK10091 MFS transport protein AraJ; Provisional

Probab=99.39  E-value=1.7e-11  Score=112.38  Aligned_cols=178  Identities=13%  Similarity=0.174  Sum_probs=130.4

Q ss_pred             HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHH
Q 014698          221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT  300 (420)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~  300 (420)
                      +.++...+..+............+|.+.++ +|.+..+.++..+...++..+++++.|++.||+|+|         ....
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r---------~~~~   72 (382)
T PRK10091          3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLK---------HILL   72 (382)
T ss_pred             chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccH---------HHHH
Confidence            456666777777777777777888887655 799999999999999999999999999999999963         3333


Q ss_pred             HHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHh
Q 014698          301 IAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL  380 (420)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~  380 (420)
                      .+....++...+....+ +.....+.-++.|++.+...+.......+..|+++|+++.+.......++..++|.+.+.+.
T Consensus        73 ~~~~~~~~~~~l~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~  151 (382)
T PRK10091         73 FLVALCVIGNAMFTLSS-SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLS  151 (382)
T ss_pred             HHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHh
Confidence            44444444444444433 34445555577788777655555555556678888999999999999999999999999998


Q ss_pred             ccCCceeeeehhhhHHHHHHHHHHhhhccC
Q 014698          381 DSTHSWSMSLFAPSIFFYLTGTIVWLAFAS  410 (420)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (420)
                      +.. +|+..|.+.++...+..+..+...++
T Consensus       152 ~~~-gwr~~f~~~~~~~~~~~~~~~~~lp~  180 (382)
T PRK10091        152 QEF-SWRYTFLLIAVFNIAVLASIYFWVPD  180 (382)
T ss_pred             hhc-cHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            875 78888888776655554444444444

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=99.39  E-value=2.8e-11  Score=111.29  Aligned_cols=155  Identities=14%  Similarity=0.110  Sum_probs=115.4

Q ss_pred             HHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhh
Q 014698          236 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI  315 (420)
Q Consensus       236 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (420)
                      ..+.....+|.+.++ +|.++.+.++..+...++..+++++.|++.||+|||         ..+..+.....+.......
T Consensus        35 ~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr---------~~~~~~~~~~~~~~~~~~~  104 (394)
T PRK10213         35 VEFLPVSLLTPMAQD-LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRR---------YVVILFAVLLTLSCLLVSF  104 (394)
T ss_pred             HHHHHHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcH---------HHHHHHHHHHHHHHHHHHH
Confidence            333444567776654 699999999999999999999999999999999963         3333343333333333333


Q ss_pred             cCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhH
Q 014698          316 DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSI  395 (420)
Q Consensus       316 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~  395 (420)
                      . ++.+..++.-++.|++.+...+.....+.+.+|+++|+++.++.....+++..++|.+.+.+.+.. +|+..|++.+.
T Consensus       105 ~-~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~~  182 (394)
T PRK10213        105 A-NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI-GWRNVFNAAAV  182 (394)
T ss_pred             H-ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CHHHHHHHHHH
Confidence            3 334455555577888888777777777778889999999999999999999999999999999886 78888887665


Q ss_pred             HHHHHHH
Q 014698          396 FFYLTGT  402 (420)
Q Consensus       396 ~~~~~~~  402 (420)
                      ..+++..
T Consensus       183 l~~~~~l  189 (394)
T PRK10213        183 MGVLCIF  189 (394)
T ss_pred             HHHHHHH
Confidence            5444333

>PRK03699 putative transporter; Provisional

Probab=99.39  E-value=4.2e-11  Score=110.34  Aligned_cols=172  Identities=8%  Similarity=0.019  Sum_probs=120.9

Q ss_pred             HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHH
Q 014698          221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT  300 (420)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~  300 (420)
                      +-.+...+..++...........+|.+.+ ++|.|..+.++..+...++..++.++.|++.||+|+|         ..+.
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r---------~~~~   76 (394)
T PRK03699          7 KLTWISFLSYALTGALVIVTGMVMGPIAE-YFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLK---------RQLI   76 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH---------HHHH
Confidence            34455555555555555566667777665 5799999999999999999999999999999999964         2333


Q ss_pred             HHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHh
Q 014698          301 IAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL  380 (420)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~  380 (420)
                      .+.....+...+.... ++.....+..++.|.+.+...+.......+..|+++|+.+.+..+....+++.++|.+.+.+.
T Consensus        77 ~~~~~~~i~~~l~~~~-~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~  155 (394)
T PRK03699         77 FGFALMILAVAGLMFS-HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLL  155 (394)
T ss_pred             HHHHHHHHHHHHHHHc-chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3333333333333332 223344445566777777666566666667788889999999998888899999999999887


Q ss_pred             ccCCceeeeehhhhHHHHHHHHH
Q 014698          381 DSTHSWSMSLFAPSIFFYLTGTI  403 (420)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~  403 (420)
                      +...+|+..|...++..++..++
T Consensus       156 ~~~~gw~~~f~~~~~~~~~~~~~  178 (394)
T PRK03699        156 ARSIEWYWVYACIGLVYVAIFIL  178 (394)
T ss_pred             hccccHHHHHHHHHHHHHHHHHH
Confidence            65458888888766655444433

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.38  E-value=3.1e-11  Score=111.29  Aligned_cols=180  Identities=9%  Similarity=0.060  Sum_probs=126.8

Q ss_pred             HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHH
Q 014698          221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT  300 (420)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~  300 (420)
                      |-+.......+....+.......+|.+.++ +|.+..+.++..+...++..++.++.|+++||+|||        + .+.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r--------~-~l~   72 (392)
T PRK10473          3 RFLLCSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRK--------P-VAI   72 (392)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCCh--------H-HHH
Confidence            444445555555556666666778877765 699999999999999999999999999999999964        2 233


Q ss_pred             HHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHh
Q 014698          301 IAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL  380 (420)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~  380 (420)
                      .+.....+......... +.....+..++.|.+.+...........+..|+++|+++.+..+....++..++|.+.+.+.
T Consensus        73 ~~~~~~~i~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~  151 (392)
T PRK10473         73 PGAALFIIASLLCSLAE-TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIM  151 (392)
T ss_pred             HHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33333333333333322 23334444566677777666666667777789999999999999999999999999999888


Q ss_pred             ccCCceeeeehhhhHHHHHHHHHHhhhccCCC
Q 014698          381 DSTHSWSMSLFAPSIFFYLTGTIVWLAFASSK  412 (420)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (420)
                      +.. +|+..+.+.+++.++...+.+...++++
T Consensus       152 ~~~-g~~~~~~~~~~~~~i~~~~~~~~~~~~~  182 (392)
T PRK10473        152 LKF-PWQSLFYTMAAMGILVLLLSLFILKETR  182 (392)
T ss_pred             hCc-ChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence            775 7887787777666666555555555443

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=99.38  E-value=1.4e-11  Score=113.90  Aligned_cols=165  Identities=15%  Similarity=0.066  Sum_probs=120.1

Q ss_pred             cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698          220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ  299 (420)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~  299 (420)
                      ++++....+..+....+.......+|.++++++|.|+.+.|+..+...++..+++++.|+++||+|||       | .+.
T Consensus        14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r-------~-~l~   85 (399)
T PRK05122         14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPK-------K-AVV   85 (399)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCc-------c-hHH
Confidence            56777778888888888888888999999888899999999999999999999999999999999975       2 222


Q ss_pred             HHHHHHhH--HHHHHHhhcCC----CcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHH
Q 014698          300 TIAFLSPA--VCMTLSSIDLG----LPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGV  373 (420)
Q Consensus       300 ~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~  373 (420)
                      ........  ..........+    +....++.-++.|.+.+...+.......+..|+++|+++.++......+|..++|
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~  165 (399)
T PRK05122         86 FGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGA  165 (399)
T ss_pred             HHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHH
Confidence            22211111  11111111111    1112333446778777766666666666778999999999999888899999999


Q ss_pred             HHHHHHhccCCceeeeehhh
Q 014698          374 ALTGYLLDSTHSWSMSLFAP  393 (420)
Q Consensus       374 ~~~g~l~~~~~~~~~~~~~~  393 (420)
                      .+.+.+.+.. +++..+.+.
T Consensus       166 ~l~~~l~~~~-g~~~~~~~~  184 (399)
T PRK05122        166 PLGVLLYHWG-GLAGLGLLI  184 (399)
T ss_pred             HHHHHHHHcc-cHHHHHHHH
Confidence            9999999876 566555443

>TIGR00899 2A0120 sugar efflux transporter

Probab=99.38  E-value=1.6e-11  Score=112.50  Aligned_cols=173  Identities=13%  Similarity=0.109  Sum_probs=115.6

Q ss_pred             HHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhH
Q 014698          228 YAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPA  307 (420)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~  307 (420)
                      +..++...+.......+|.|+++++|.|+.+.|+..+...+...+.+++.|+++||+|+|       |... ..+.....
T Consensus         4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r-------~~~~-~~~~~~~~   75 (375)
T TIGR00899         4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDR-------KGLI-LFCCLLAA   75 (375)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-------hHHH-HHHHHHHH
Confidence            456666777777788999999888899999999999999999999999999999999975       3333 23333323


Q ss_pred             HHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHH--HHHHHHhhhhhHHHHHHHHHHHhccCCc
Q 014698          308 VCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASIL--LGITNTVGAVPGIVGVALTGYLLDSTHS  385 (420)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~--~g~~~~~~~~g~~~~~~~~g~l~~~~~~  385 (420)
                      ....+....+ +.....+.-.+.+.+.+...+.......+..|++.|+.+  .+.......+|..++|.+.+.+.+.. +
T Consensus        76 ~~~~~~~~~~-~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-~  153 (375)
T TIGR00899        76 LACLLFAWNR-NYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF-G  153 (375)
T ss_pred             HHHHHHHhcc-hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc-c
Confidence            3222223322 222233333444444443444333334444455556544  57777888899999999999999875 7


Q ss_pred             eeeeehhhhHHHHHHHHHHhhhccC
Q 014698          386 WSMSLFAPSIFFYLTGTIVWLAFAS  410 (420)
Q Consensus       386 ~~~~~~~~~~~~~~~~~~~~~~~~~  410 (420)
                      |+..|++.+.+.++..+..+...++
T Consensus       154 ~~~~f~~~~~~~~~~~~~~~~~~~~  178 (375)
T TIGR00899       154 FTVMFLTAALAFVLCGVLVWLFLPS  178 (375)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            8888888777666655555554443

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>PRK12382 putative transporter; Provisional

Probab=99.37  E-value=2.4e-11  Score=111.95  Aligned_cols=160  Identities=18%  Similarity=0.126  Sum_probs=114.7

Q ss_pred             cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698          220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ  299 (420)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~  299 (420)
                      ++.++...+..++...........+|.++++++|.|+.+.|+..+...+...+++++.|+++||+|||       | .+ 
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r-------~-~l-   84 (392)
T PRK12382         14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAK-------R-SA-   84 (392)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcch-------H-HH-
Confidence            55666666666666666777777889898888899999999999999999999999999999999975       2 22 


Q ss_pred             HHHHHHhHHH---HHHHhhcC----CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHH
Q 014698          300 TIAFLSPAVC---MTLSSIDL----GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVG  372 (420)
Q Consensus       300 ~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~  372 (420)
                      ..+.....+.   ........    .+.....+.-++.|.+.+...+.......+..|+|+|+++.|........+..++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g  164 (392)
T PRK12382         85 LQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAG  164 (392)
T ss_pred             HHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHH
Confidence            2222222111   11111111    1123334444677777776555555666677899999999999999899999999


Q ss_pred             HHHHHHHhccCCceeee
Q 014698          373 VALTGYLLDSTHSWSMS  389 (420)
Q Consensus       373 ~~~~g~l~~~~~~~~~~  389 (420)
                      |.+.+.+.+.. +|+..
T Consensus       165 ~~~~~~l~~~~-g~~~~  180 (392)
T PRK12382        165 APLGLLLHSHF-GFAAL  180 (392)
T ss_pred             HHHHHHHHhcc-ChHHH
Confidence            99999998875 56543

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=99.37  E-value=3.8e-12  Score=111.27  Aligned_cols=174  Identities=10%  Similarity=0.039  Sum_probs=137.0

Q ss_pred             HHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHH
Q 014698          225 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL  304 (420)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~  304 (420)
                      ...+.+..+++.--.+..-.|...+ +.++|..|.|.+.+...+..-++..+.|.++||.+.|         ..+..+++
T Consensus        33 ~~fiGYa~fYl~RknF~~a~p~l~e-~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr---------~fm~~gLi  102 (448)
T COG2271          33 SIFIGYAAFYLTRKNFNLAMPALIE-DGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPR---------YFMAFGLI  102 (448)
T ss_pred             HHHHHHHHHHHHHHhHhhccHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCc---------eeehHHHH
Confidence            3344444444444445555565555 4589999999999999999999999999999999864         44556666


Q ss_pred             HhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHH--HHHhcc
Q 014698          305 SPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALT--GYLLDS  382 (420)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~--g~l~~~  382 (420)
                      +.++..+++.+.. +.....+...+.|.+.+...+++.-.+.+-+++++||+..++-|+..++|+.+.|.+.  +.+.++
T Consensus       103 lsai~nil~Gfs~-s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~  181 (448)
T COG2271         103 LSAIVNILFGFSP-SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH  181 (448)
T ss_pred             HHHHHHHHHhhhh-HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhc
Confidence            6666666666544 3444555567889999988888888888889999999999999999999999999999  888888


Q ss_pred             CCceeeeehhhhHHHHHHHHHHhhhccC
Q 014698          383 THSWSMSLFAPSIFFYLTGTIVWLAFAS  410 (420)
Q Consensus       383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (420)
                      . +++..|++-+++.++.+++.+...+.
T Consensus       182 ~-~w~~~f~~pgiiaiival~~~~~~rd  208 (448)
T COG2271         182 G-GWRAAFYFPGIIAIIVALILLFLLRD  208 (448)
T ss_pred             c-chhHHHHHHHHHHHHHHHHHHHHhCC
Confidence            5 89999999999888888777766554

>PRK11043 putative transporter; Provisional

Probab=99.36  E-value=3e-11  Score=111.71  Aligned_cols=168  Identities=11%  Similarity=-0.022  Sum_probs=114.8

Q ss_pred             HHHHhHHHHHHHhhhhhhH--hhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHh
Q 014698          229 AHFCGSWGHYTCLSWLPTY--FSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSP  306 (420)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~  306 (420)
                      ..+.....+.....+.|.+  +++++|.++.+.++..+...++..++.++.|+++||+++|       + . +..+....
T Consensus        11 ~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-------~-~-~~~~~~~~   81 (401)
T PRK11043         11 LAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRK-------P-V-LLAGLSLF   81 (401)
T ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCc-------H-H-HHHHHHHH
Confidence            3333444444555555654  4566799999999999999999999999999999999975       2 2 22333333


Q ss_pred             HHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCce
Q 014698          307 AVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSW  386 (420)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~  386 (420)
                      .+......... +.....+..++.|++.+...........+.+|++++++..+..+....++..++|.+.+.+.+.. +|
T Consensus        82 ~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-g~  159 (401)
T PRK11043         82 ALGSLGMLWVE-SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF-GW  159 (401)
T ss_pred             HHHHHHHHHhc-CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-Ch
Confidence            33333333322 23344444466666665555444555667788888999999999889999999999999999886 78


Q ss_pred             eeeehhhhHHHHHHHHHHhhh
Q 014698          387 SMSLFAPSIFFYLTGTIVWLA  407 (420)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~~~~  407 (420)
                      +..+.+.++..++..+..+..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~  180 (401)
T PRK11043        160 QAIFATLFAITLLLILPTLRL  180 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHHc
Confidence            878877766555554444333

>TIGR00897 2A0118 polyol permease family

Probab=99.36  E-value=4.1e-11  Score=110.68  Aligned_cols=155  Identities=16%  Similarity=0.069  Sum_probs=109.0

Q ss_pred             cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698          220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ  299 (420)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~  299 (420)
                      .|.+....+..++...+.+....+.|.++++ +|.++.+.++..+...++..++.++.|++.||+|+|        +. .
T Consensus        12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k--------~~-l   81 (402)
T TIGR00897        12 PLNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPL--------KT-M   81 (402)
T ss_pred             CchhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcH--------HH-H
Confidence            3556666677777777777777788888866 699999999999999999999999999999999964        22 2


Q ss_pred             HHHHHHhHHHHHHH---hhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhH-HHHHHH
Q 014698          300 TIAFLSPAVCMTLS---SIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPG-IVGVAL  375 (420)
Q Consensus       300 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~-~~~~~~  375 (420)
                      ..+.....+.....   .....+.........+.|.+.+...+.......+..|+++|++++|+.+...++|. .++|.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~  161 (402)
T TIGR00897        82 MIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYY  161 (402)
T ss_pred             HHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            22332222222211   11112233333344555666655544455556677899999999999999999986 588999


Q ss_pred             HHHHhccCC
Q 014698          376 TGYLLDSTH  384 (420)
Q Consensus       376 ~g~l~~~~~  384 (420)
                      .+.+.+..+
T Consensus       162 ~~~l~~~~g  170 (402)
T TIGR00897       162 SSYAIPAFG  170 (402)
T ss_pred             HHhcccccc
Confidence            999888763

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=99.35  E-value=5e-11  Score=110.57  Aligned_cols=178  Identities=15%  Similarity=0.141  Sum_probs=123.0

Q ss_pred             cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcch-----hhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHH
Q 014698          220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTE-----AAWVSILPPLASVLVTSIAAQFADNLIATGVETTMV  294 (420)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~  294 (420)
                      ++.+....+..++..........++|.+.++ +|.+..+     .+...+...+...++.++.|+++||+++|       
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-------   84 (408)
T PRK09874         13 KRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQ-LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRK-------   84 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH-hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcH-------
Confidence            3445555666677777777778899999976 5887654     37888888999999999999999999964       


Q ss_pred             HHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHH
Q 014698          295 RKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVA  374 (420)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~  374 (420)
                       +.+ ..+.........+.... ++.....+..++.|++.+ ..+.......+..|+++|+++.|..+....+|..++|.
T Consensus        85 -~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  160 (408)
T PRK09874         85 -IML-LRSALGMGIVMVLMGLA-QNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPL  160 (408)
T ss_pred             -HHH-HHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHH
Confidence             232 23333333333333332 223344444455666543 44444455667788899999999999999999999999


Q ss_pred             HHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccC
Q 014698          375 LTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFAS  410 (420)
Q Consensus       375 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (420)
                      +.+.+.+.. +++..+.+.++..++..+..+...++
T Consensus       161 ~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (408)
T PRK09874        161 AGGLLADSY-GLRPVFFITASVLFLCFLVTLFCIRE  195 (408)
T ss_pred             HHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999998875 68878877776666555555554443

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=99.35  E-value=3.8e-11  Score=108.86  Aligned_cols=164  Identities=13%  Similarity=0.019  Sum_probs=116.8

Q ss_pred             HHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh
Q 014698          235 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS  314 (420)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (420)
                      .....+...+|.+.+| +|.|+.+.|++.+...++..++++..|+++||+|||        +. ................
T Consensus         5 ~~~~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr--------~~-~~~~~~~~~~~~~~~~   74 (368)
T TIGR00903         5 AIWVTFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKR--------WF-LFGSLATFAAAAGRLL   74 (368)
T ss_pred             HHHHHHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccch--------HH-HHHHHHHHHHHHHHHH
Confidence            3444555566766654 799999999999999999999999999999999953        32 2222222222222111


Q ss_pred             hcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhh
Q 014698          315 IDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPS  394 (420)
Q Consensus       315 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~  394 (420)
                       ..++.....+.-++.|.+.+. .........+..|+++|+++.++.+....+|..+++.+.+.+.+.. +|+..|.+.+
T Consensus        75 -~~~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~-gWr~~f~~~~  151 (368)
T TIGR00903        75 -DPFNYEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG-GLQLLIIPIA  151 (368)
T ss_pred             -HhccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-chHHHHHHHH
Confidence             112344445555777877774 4444455567789999999999999999999999999999998875 8999888877


Q ss_pred             HHHHHHHHHHhhhccCC
Q 014698          395 IFFYLTGTIVWLAFASS  411 (420)
Q Consensus       395 ~~~~~~~~~~~~~~~~~  411 (420)
                      ++.++..++.+...+++
T Consensus       152 ~l~~~~~~~~~~~lp~~  168 (368)
T TIGR00903       152 AVAAAGIILVLAALPAL  168 (368)
T ss_pred             HHHHHHHHHHHHHcCCC
Confidence            76666666555555543

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>TIGR00895 2A0115 benzoate transport

Probab=99.35  E-value=3.3e-11  Score=111.34  Aligned_cols=170  Identities=12%  Similarity=0.078  Sum_probs=120.3

Q ss_pred             HHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHH
Q 014698          229 AHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAV  308 (420)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~  308 (420)
                      ..+.............|.+.+ ++|.++.+.+++.+...++..++.++.|++.||+|+|         .....+.....+
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~---------~~~~~~~~~~~~   94 (398)
T TIGR00895        25 IMLMDGYDLAAMGFAAPAISA-EWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRK---------RVLLWSILLFSV   94 (398)
T ss_pred             HHHHHHHHHHHHHhhHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhH---------HHHHHHHHHHHH
Confidence            333333344444556666655 4799999999999999999999999999999999953         333333333333


Q ss_pred             HHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceee
Q 014698          309 CMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSM  388 (420)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~  388 (420)
                      ...+..... +.....+..++.|++.+...+.......+..|+++|+++.++.+....+|..++|.+.+.+.+.. +++.
T Consensus        95 ~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-g~~~  172 (398)
T TIGR00895        95 FTLLCALAT-NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF-GWRS  172 (398)
T ss_pred             HHHHHHHcc-chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc-ccee
Confidence            333333332 34444555577788777777777777777788899999999999999999999999999999886 7888


Q ss_pred             eehhhhHHHHHHHHHHhhhccC
Q 014698          389 SLFAPSIFFYLTGTIVWLAFAS  410 (420)
Q Consensus       389 ~~~~~~~~~~~~~~~~~~~~~~  410 (420)
                      .+.+.++...+...+.+...++
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~  194 (398)
T TIGR00895       173 LFYVGGIAPLLLLLLLMRFLPE  194 (398)
T ss_pred             ehhhhhhHHHHHHHHHHHhCCC
Confidence            8887755555554444444443

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.35  E-value=9.4e-11  Score=107.53  Aligned_cols=152  Identities=11%  Similarity=-0.040  Sum_probs=117.4

Q ss_pred             cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698          220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ  299 (420)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~  299 (420)
                      ++.++......++...........+|.+.++ +|.|..+.|+..+...++..+++++.|+++||+|+|         ...
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k---------~~~   74 (381)
T PRK03633          5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFN---------RSY   74 (381)
T ss_pred             HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH---------HHH
Confidence            4567778888888888888888999999986 599999999999999999999999999999999964         333


Q ss_pred             HHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698          300 TIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYL  379 (420)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l  379 (420)
                      ..+..............+ +.....+..++.|++.+...+.......+..++++|+++.+..+...++|..++|.+.+.+
T Consensus        75 ~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l  153 (381)
T PRK03633         75 YLASLIFAAGCAGLGLMV-GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKV  153 (381)
T ss_pred             HHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            334444343333333332 3444555557778877766555555666778889999999999999999999999999988


Q ss_pred             hcc
Q 014698          380 LDS  382 (420)
Q Consensus       380 ~~~  382 (420)
                      .+.
T Consensus       154 ~~~  156 (381)
T PRK03633        154 STE  156 (381)
T ss_pred             ccc
Confidence            765

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=99.34  E-value=1.3e-11  Score=115.32  Aligned_cols=180  Identities=12%  Similarity=0.045  Sum_probs=117.9

Q ss_pred             cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698          220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ  299 (420)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~  299 (420)
                      ++.++...+................| ++++. |.++.+.++..+...++..++.++.|+++||+|+|        +. .
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~-g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~--------~~-~   94 (438)
T TIGR00712        26 WQVFLGIFFGYAAYYLVRKNFALAMP-YLVEQ-GFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPR--------VF-L   94 (438)
T ss_pred             HHHHHHHHHHHHHHHHHhccHHhhhH-HHHHc-CCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCc--------ee-h
Confidence            33344444444443333333444555 45554 99999999999999999999999999999999975        22 2


Q ss_pred             HHHHHHhHHHHHHHhhcC---CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHH
Q 014698          300 TIAFLSPAVCMTLSSIDL---GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALT  376 (420)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~  376 (420)
                      ..+.....+........+   ++.....+..++.|++.+...+.....+.+.+|+++|+++.|+.+....+++.++|.+.
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~  174 (438)
T TIGR00712        95 PAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLV  174 (438)
T ss_pred             HHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHH
Confidence            223333333322222211   11222333345667776665565666667778999999999999999999999999988


Q ss_pred             HHHhccCCceeeeehhhhHHHHHHHHHHhhhccC
Q 014698          377 GYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFAS  410 (420)
Q Consensus       377 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (420)
                      +...+...+|+..|++.+++.++..+..+...++
T Consensus       175 ~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~  208 (438)
T TIGR00712       175 LLGMAWFNDWHAALYFPAICAIIVALFAFAMMRD  208 (438)
T ss_pred             HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccC
Confidence            8766544578888888777666655555554443

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=99.34  E-value=5.6e-11  Score=109.65  Aligned_cols=177  Identities=8%  Similarity=-0.036  Sum_probs=117.8

Q ss_pred             HHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHH
Q 014698          223 VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA  302 (420)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~  302 (420)
                      .+.......+...........+|.+.++ +|.|+.+.++..+...++..++.++.|+++||+|||       + . +..+
T Consensus        10 l~~~~~~~~~~~~~~~~~~p~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr-------~-~-~~~~   79 (394)
T PRK11652         10 LFMLVLLVAVGQMAQTIYVPAIADMARD-LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRR-------P-V-ILVG   79 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh-------H-H-HHHH
Confidence            3334444444444444455566766654 699999999999999999999999999999999974       2 2 2223


Q ss_pred             HHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc
Q 014698          303 FLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS  382 (420)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~  382 (420)
                      .....+........ ++.....+..++.|++.+...+.......+..++++++.+.+..+....++..++|.+.+.+.+.
T Consensus        80 ~~~~~~~~~~~~~~-~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~  158 (394)
T PRK11652         80 MSIFILGTLVALFA-HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTL  158 (394)
T ss_pred             HHHHHHHHHHHHHH-ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            33333333333332 22344444456667766654444444555567778899999999999999999999999999887


Q ss_pred             CCceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698          383 THSWSMSLFAPSIFFYLTGTIVWLAFASS  411 (420)
Q Consensus       383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (420)
                      . +|+..|.+.++...+.........+++
T Consensus       159 ~-g~~~~f~~~~~~~~~~~~~~~~~~~~~  186 (394)
T PRK11652        159 F-GWRACYLFLLLLGAGVTFSMARWMPET  186 (394)
T ss_pred             c-ChHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            5 688888876665554444444444443

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=99.32  E-value=9.4e-11  Score=110.47  Aligned_cols=162  Identities=16%  Similarity=0.192  Sum_probs=106.0

Q ss_pred             HHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh
Q 014698          235 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS  314 (420)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (420)
                      ...+......|.+ ++++|.+..+.++..+...++..++.++.|+++||+|+|        +. ...+.+...+...+..
T Consensus        50 ~~~~~~~~~~~~l-~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r--------~~-~~~~~~~~~~~~~~~~  119 (476)
T PLN00028         50 VSTFAAAPLLPII-RDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPR--------YG-SAFLLMLTAPAVFCMS  119 (476)
T ss_pred             HHHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh--------HH-HHHHHHHHHHHHHHHH
Confidence            3333444445544 556799999999998888899999999999999999974        22 2333333333333333


Q ss_pred             hcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc----c----CCce
Q 014698          315 IDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD----S----THSW  386 (420)
Q Consensus       315 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~----~----~~~~  386 (420)
                      ... +.....+..++.|++.+... +....+.+.+|+++||++.|+.+...++|+.+++.+.+.+.+    .    ..+|
T Consensus       120 ~~~-s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gW  197 (476)
T PLN00028        120 LVS-SATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAW  197 (476)
T ss_pred             Hhc-CHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhh
Confidence            332 23333344466676665432 333445666888999999999998888888888777765532    1    1268


Q ss_pred             eeeehhhhHHHHHHHHHHhhhc
Q 014698          387 SMSLFAPSIFFYLTGTIVWLAF  408 (420)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~~~~~  408 (420)
                      +..|++.+++.++..+..+.+.
T Consensus       198 r~~f~i~g~l~l~~~l~~~~~~  219 (476)
T PLN00028        198 RIAFFVPGLLHIIMGILVLTLG  219 (476)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHc
Confidence            8888888776666555554443

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.32  E-value=1.2e-10  Score=107.29  Aligned_cols=181  Identities=11%  Similarity=0.073  Sum_probs=112.4

Q ss_pred             cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHH-HHHHHHHhhhhhhhhhhhcCcchHHHHHHH
Q 014698          220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPL-ASVLVTSIAAQFADNLIATGVETTMVRKIC  298 (420)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~  298 (420)
                      |.+.+...+..++...+.......+|.|+++++|.|+.+.|+..+...+ +...+.+.+++ .||+|+|       |..+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r-------~~~~   85 (393)
T PRK15011         14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDR-------KSLI   85 (393)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcccch-------hHHH
Confidence            5666777777888888888888999999998899999999998766555 44455555555 9999975       3333


Q ss_pred             HHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccch--HHHHHHHHHhhhhhHHHHHHHH
Q 014698          299 QTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYA--SILLGITNTVGAVPGIVGVALT  376 (420)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--g~~~g~~~~~~~~g~~~~~~~~  376 (420)
                      .. +.....+......... +.....+...+.+.......+.......+..+++.|  +...+..+....+|..++|.+.
T Consensus        86 ~~-~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~  163 (393)
T PRK15011         86 VF-CCLLGVLACTLFAWNR-NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLA  163 (393)
T ss_pred             HH-HHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHH
Confidence            22 2222222222222221 122222222223333332333333333333444433  3445788888899999999999


Q ss_pred             HHHhccCCceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698          377 GYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASS  411 (420)
Q Consensus       377 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (420)
                      +.+.++. +|+..|+..+...++..+..+...++.
T Consensus       164 ~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~~~~  197 (393)
T PRK15011        164 YALAMGF-SFTVMYLSAAVAFIVCGVMVWLFLPSM  197 (393)
T ss_pred             HHHHHhc-ChHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence            9999886 899888887766665555555444443

>TIGR00893 2A0114 d-galactonate transporter

Probab=99.32  E-value=2.3e-11  Score=112.26  Aligned_cols=160  Identities=15%  Similarity=0.102  Sum_probs=116.4

Q ss_pred             HHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcC
Q 014698          238 YTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDL  317 (420)
Q Consensus       238 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (420)
                      .......|. +++++|.+..+.+++.+...++..++.++.|++.||+|||+        . ...+.....+.........
T Consensus        11 ~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~--------~-~~~~~~~~~~~~~~~~~~~   80 (399)
T TIGR00893        11 ANLSFAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARK--------T-LAVFIVIWGVFTGLQAFAG   80 (399)
T ss_pred             HhhhHhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcce--------e-eHHHHHHHHHHHHHHHHHc
Confidence            333444455 55668999999999999999999999999999999999752        2 2223323233222222222


Q ss_pred             CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHH
Q 014698          318 GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFF  397 (420)
Q Consensus       318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~  397 (420)
                       +.....+..++.|++.+...+.......+..|+++|+++.++.+....+|..++|.+.+.+.+.. +++..|...++..
T Consensus        81 -~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~~  158 (399)
T TIGR00893        81 -AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF-SWQWAFIIEGVLG  158 (399)
T ss_pred             -CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC-CchHHHHHHHHHH
Confidence             34455555677888888777777777777789999999999999999999999999999998886 6888888776665


Q ss_pred             HHHHHHHhhhcc
Q 014698          398 YLTGTIVWLAFA  409 (420)
Q Consensus       398 ~~~~~~~~~~~~  409 (420)
                      ++..+..+...+
T Consensus       159 ~~~~~~~~~~~~  170 (399)
T TIGR00893       159 IIWGVLWLKFIP  170 (399)
T ss_pred             HHHHHHhhheec
Confidence            555554444443

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=99.32  E-value=1e-10  Score=107.22  Aligned_cols=150  Identities=11%  Similarity=0.003  Sum_probs=99.7

Q ss_pred             cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698          220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ  299 (420)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~  299 (420)
                      +|.++...+.........+......+.+-++.+|+|..|.+++.+...+...+.++..|++.||+|.|        +...
T Consensus        33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R--------~v~~  104 (462)
T PRK15034         33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGR--------RWTV  104 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh--------HHHH
Confidence            45666666555555555555555556555556899999999999999999999999999999999974        3333


Q ss_pred             HHHHHHhHHHHHHHhhc----CCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHH
Q 014698          300 TIAFLSPAVCMTLSSID----LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVAL  375 (420)
Q Consensus       300 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~  375 (420)
                      ....+. .+........    .++.....+.-++.|++ +.........+.+.+|+++||++.|+.....++|..+++.+
T Consensus       105 ~~~ll~-~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l  182 (462)
T PRK15034        105 FSTAIL-IIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLV  182 (462)
T ss_pred             HHHHHH-HHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHH
Confidence            222222 2222222221    12233444445677776 44556666666677899999999999977777777766665


Q ss_pred             HHHH
Q 014698          376 TGYL  379 (420)
Q Consensus       376 ~g~l  379 (420)
                      .+.+
T Consensus       183 ~p~~  186 (462)
T PRK15034        183 APLV  186 (462)
T ss_pred             HHHH
Confidence            5543

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=99.31  E-value=9.1e-11  Score=108.74  Aligned_cols=174  Identities=10%  Similarity=0.075  Sum_probs=121.1

Q ss_pred             HHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHH
Q 014698          225 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL  304 (420)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~  304 (420)
                      ...+..+.............|.+.++ +|.++.+.++..+...++..++.++.|++.||+|+|       + ... .+..
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-------~-~~~-~~~~   88 (406)
T PRK11551         19 LCFLVALLEGLDLQSAGVAAPRMAQE-FGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRK-------R-ILI-VSVA   88 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-------h-hHH-HHHH
Confidence            33444444455555556666766655 799999999999999999999999999999999975       2 222 2222


Q ss_pred             HhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCC
Q 014698          305 SPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTH  384 (420)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~  384 (420)
                      ...+........ ++.....+..++.|++.+...+.......+.+|+++|+++.++.+....+|..+++.+.+.+.+.. 
T Consensus        89 ~~~~~~~~~~~~-~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-  166 (406)
T PRK11551         89 LFGLFSLATAQA-WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDA-  166 (406)
T ss_pred             HHHHHHHHHHHh-ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-
Confidence            222322222232 234445555577788877666666677778889999999999999999999999999988887765 


Q ss_pred             ceeeeehhhhHHHHHHHHHHhhhccC
Q 014698          385 SWSMSLFAPSIFFYLTGTIVWLAFAS  410 (420)
Q Consensus       385 ~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (420)
                      +|+..+++.+++.++.........++
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~l~~  192 (406)
T PRK11551        167 AWRHIFYVGGVGPLLLVPLLMRWLPE  192 (406)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            67777777665444444444443443

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.31  E-value=4e-11  Score=110.21  Aligned_cols=158  Identities=16%  Similarity=0.136  Sum_probs=113.3

Q ss_pred             cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698          220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ  299 (420)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~  299 (420)
                      +|+++.+.+..++...+........+...+ +++.++.+.+++.+...++..+..++.|++.||++||       |..  
T Consensus         2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr-------~vl--   71 (393)
T PRK11195          2 SKGFYAIMAAQFFSALADNALLFAAIALLK-ELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKG-------RVM--   71 (393)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCc-------hhh--
Confidence            456677777777777766555565666654 4688888999999999999999999999999999976       222  


Q ss_pred             HHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698          300 TIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYL  379 (420)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l  379 (420)
                      ..+.....+.........  ..  .+.-++.|++.+...+.....+.+.+|+|+|++++|+.+....++..+||.++|.+
T Consensus        72 ~~~~~~~~~~~~~~~~~~--~~--~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l  147 (393)
T PRK11195         72 FIANGIKLLGCLLMLFGI--HP--LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGAL  147 (393)
T ss_pred             HHHHHHHHHHHHHHHHHH--HH--HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            222222222111111111  11  33345678888878888888888889999999999999999999999999999999


Q ss_pred             hccCCceeeeehhh
Q 014698          380 LDSTHSWSMSLFAP  393 (420)
Q Consensus       380 ~~~~~~~~~~~~~~  393 (420)
                      .+..  +...+.+.
T Consensus       148 ~~~~--~~~~~~i~  159 (393)
T PRK11195        148 ADPH--AEAALAVC  159 (393)
T ss_pred             HHHH--HHHHHHHH
Confidence            9863  44444443

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.31  E-value=5.2e-11  Score=109.19  Aligned_cols=162  Identities=14%  Similarity=0.080  Sum_probs=117.9

Q ss_pred             HHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhc
Q 014698          237 HYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID  316 (420)
Q Consensus       237 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (420)
                      .......+|.+.++ +|.++.+.++..+...++..++.++.|++.||+|||         ..+..+.....+........
T Consensus         7 ~~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~---------~~~~~~~~~~~i~~~~~~~~   76 (377)
T PRK11102          7 IDMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRK---------PVILGGTLVFALAAVACALA   76 (377)
T ss_pred             HHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCCh---------HHHHHHHHHHHHHHHHHHHH
Confidence            34455677887776 699999999999999999999999999999999964         23333333333333333333


Q ss_pred             CCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHH
Q 014698          317 LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIF  396 (420)
Q Consensus       317 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~  396 (420)
                      . +.....+..++.|++.+...+.......+..|+++|+++.++.+....+|..++|.+.+.+.+.. +++..+...+..
T Consensus        77 ~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~  154 (377)
T PRK11102         77 Q-TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF-SWHAIFWVLALA  154 (377)
T ss_pred             c-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ChHHHHHHHHHH
Confidence            2 23444455567777777666666677777788899999999999999999999999999999875 687777776665


Q ss_pred             HHHHHHHHhhhccC
Q 014698          397 FYLTGTIVWLAFAS  410 (420)
Q Consensus       397 ~~~~~~~~~~~~~~  410 (420)
                      .++..+......++
T Consensus       155 ~~~~~~~~~~~~~~  168 (377)
T PRK11102        155 AILAAALVFFFIPE  168 (377)
T ss_pred             HHHHHHHHHHhCCc
Confidence            55555554444444

>TIGR00889 2A0110 nucleoside transporter

Probab=99.31  E-value=2.8e-11  Score=112.08  Aligned_cols=130  Identities=17%  Similarity=0.233  Sum_probs=105.6

Q ss_pred             HHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhc---hHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchh
Q 014698           49 LLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAG---FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA  125 (420)
Q Consensus        49 ~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~  125 (420)
                      .+.+..+.+.||+++|+++..+.++..++..+.....+   +++.+++.+++.|++.+...+....+++|++|+++|+++
T Consensus       266 ~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~  345 (418)
T TIGR00889       266 FFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASA  345 (418)
T ss_pred             HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence            34666777799999999999999988887665543122   245677889999999988888889999999999999999


Q ss_pred             hHHHH-hhhhhHHHHHHhhHHHhhhc------cchhHHHHHHHHHHHHHH-HHhhhcccCc
Q 014698          126 VSFVF-GGLSFGSVAGLLLAPPIIEN------LGWESVFYIFGLLGIAWF-SGFKILQEGE  178 (420)
Q Consensus       126 ~~~~~-~~~~~g~~~g~~l~~~l~~~------~gwr~~f~~~~~~~~~~~-~~~~~~~~~~  178 (420)
                      +|+.+ ...++|..+||+++|.+.+.      +||+..|.+.++..++.. +..++++|+.
T Consensus       346 ~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~  406 (418)
T TIGR00889       346 QGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH  406 (418)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            99997 67899999999999999987      469999999888877654 4555555553

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.30  E-value=5.3e-11  Score=109.84  Aligned_cols=176  Identities=16%  Similarity=0.126  Sum_probs=114.8

Q ss_pred             cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698          220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ  299 (420)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~  299 (420)
                      ||.+|......++...+......++|.|+++++|.++.+.+...+...+...+++++.|+++||+|||       +....
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr-------~~~~~   73 (396)
T TIGR00882         1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLK-------KHLLW   73 (396)
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-------HHHHH
Confidence            57888888889998888889999999999998999999999999999999999999999999999975       22222


Q ss_pred             HHHHHHh-HHHHHHHhhcCC--C-cHH-HHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHH
Q 014698          300 TIAFLSP-AVCMTLSSIDLG--L-PHW-EIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVA  374 (420)
Q Consensus       300 ~~~~~~~-~~~~~~~~~~~~--~-~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~  374 (420)
                      ....... ..........+.  . ... ..+..+..+.+.+...+.......+ .. ++++...|......++|..++|.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~-~~~~~~~g~~~~~~~~g~~~g~~  151 (396)
T TIGR00882        74 IISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEK-VS-RNSNFEYGKARMFGCVGWALCAS  151 (396)
T ss_pred             HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHH-hh-hhcccccchhhhhcccHHHHHHH
Confidence            1111111 111111111110  0 111 1112233444444333333333322 22 23445677788888999999999


Q ss_pred             HHHHHhccCCceeeeehhhhHHHHHHHHHHhh
Q 014698          375 LTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWL  406 (420)
Q Consensus       375 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (420)
                      +.|.+.+.  +++..|++.+...++..++.+.
T Consensus       152 ~~g~l~~~--~~~~~f~~~~~~~~~~~~~~~~  181 (396)
T TIGR00882       152 IAGILFSI--DPQIVFWLGSGFALILMLLLMF  181 (396)
T ss_pred             HHhhhhcc--CchHHHHHHHHHHHHHHHHHHH
Confidence            99988765  6777887776655555444433

>TIGR00891 2A0112 putative sialic acid transporter

Probab=99.30  E-value=9.6e-11  Score=108.51  Aligned_cols=164  Identities=10%  Similarity=0.031  Sum_probs=118.4

Q ss_pred             HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHH
Q 014698          221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT  300 (420)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~  300 (420)
                      +.+....+..+...+.........|.+. +++|.+..+.++..+...++..++.++.|++.||+|||        +. +.
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r--------~~-~~   81 (405)
T TIGR00891        12 NAFSAAWLGWLLDAFDFFLVALVLAEVA-GEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRR--------LP-MV   81 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccH--------HH-HH
Confidence            3344555566666666666666666654 55799999999999999999999999999999999964        22 23


Q ss_pred             HHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHh
Q 014698          301 IAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL  380 (420)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~  380 (420)
                      .+.....+......... +........++.|++.+...+.......+..|+++|+++.++.+....+|..+++.+.+.+.
T Consensus        82 ~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~  160 (405)
T TIGR00891        82 TSIVLFSAGTLACGFAP-GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVV  160 (405)
T ss_pred             HHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33333333333333322 24444555577788877777777777778889999999999999999999999999999988


Q ss_pred             ccCC-ceeeeehhhhH
Q 014698          381 DSTH-SWSMSLFAPSI  395 (420)
Q Consensus       381 ~~~~-~~~~~~~~~~~  395 (420)
                      +..+ +|+..+.+.++
T Consensus       161 ~~~~~~w~~~f~~~~~  176 (405)
T TIGR00891       161 PVWGDGWRALFFISIL  176 (405)
T ss_pred             HhcCccHHHHHHHHHH
Confidence            7653 47767766443

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=99.30  E-value=2.1e-10  Score=106.17  Aligned_cols=160  Identities=10%  Similarity=0.078  Sum_probs=111.8

Q ss_pred             HhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCC
Q 014698          240 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGL  319 (420)
Q Consensus       240 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (420)
                      ...-+|. +.+.++.+..+.++..+.+.++..+++++.|+++||+|||         ..+..+.....++....... ++
T Consensus        35 ~~p~l~~-i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr---------~~l~~~~~~~~~~~~~~~~a-~~  103 (413)
T PRK15403         35 IQPGIIN-VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRR---------PVLITGALIFTLACAATLFT-TS  103 (413)
T ss_pred             hccCHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCch---------HHHHHHHHHHHHHHHHHHHc-CC
Confidence            3334444 3456799999999999999999999999999999999974         23333333333333333333 23


Q ss_pred             cHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHH
Q 014698          320 PHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYL  399 (420)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~  399 (420)
                      .....+.-++.|++.+...........+.+|+++++++.++.+....++..++|.+++.+.+.. +|+..|++.++..++
T Consensus       104 ~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~-gw~~~f~~~~~~~~i  182 (413)
T PRK15403        104 MTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV-HWKVLFAIIAVMGLI  182 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHH
Confidence            4444455566777665434334444555678888999999999999999999999999998875 788888887776666


Q ss_pred             HHHHHhhhccCC
Q 014698          400 TGTIVWLAFASS  411 (420)
Q Consensus       400 ~~~~~~~~~~~~  411 (420)
                      ..+..+...+++
T Consensus       183 ~~~~~~~~lp~~  194 (413)
T PRK15403        183 AFVGLLLAMPET  194 (413)
T ss_pred             HHHHHHHhCCCC
Confidence            555444444543

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=99.30  E-value=1.9e-10  Score=106.58  Aligned_cols=163  Identities=8%  Similarity=0.030  Sum_probs=112.6

Q ss_pred             HHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhc
Q 014698          237 HYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID  316 (420)
Q Consensus       237 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (420)
                      ...+...+|.+. +++|.++.+.++..+...++..++.++.|.++||+|||        +. +..+.....++.......
T Consensus        29 ~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r--------~~-l~~~~~~~~~~~~~~~~~   98 (406)
T PRK15402         29 NDMIQPGMLAVV-EDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRR--------PV-MLAGVAFFILTCLAILLA   98 (406)
T ss_pred             hhhHhcchHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh--------HH-HHHHHHHHHHHHHHHHHH
Confidence            333444556554 45799999999999999999999999999999999974        22 223333333333333332


Q ss_pred             CCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHH
Q 014698          317 LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIF  396 (420)
Q Consensus       317 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~  396 (420)
                      . +........++.|.+.+...+.......+.+|+++++++.++......++..++|.+.+.+.+.. +|+..+++.+++
T Consensus        99 ~-~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-~w~~~~~~~~~~  176 (406)
T PRK15402         99 Q-SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVL-PWRGMFVLFAAL  176 (406)
T ss_pred             c-cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CccHHHHHHHHH
Confidence            2 23344444466676666555555566667788899999999998888899999999999998875 788888887766


Q ss_pred             HHHHHHHHhhhccCC
Q 014698          397 FYLTGTIVWLAFASS  411 (420)
Q Consensus       397 ~~~~~~~~~~~~~~~  411 (420)
                      .+++....+...+++
T Consensus       177 ~~~~~~~~~~~~~~~  191 (406)
T PRK15402        177 AALSFFGLWRAMPET  191 (406)
T ss_pred             HHHHHHHHHHhCCCC
Confidence            665555444444443

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=99.30  E-value=2e-10  Score=105.88  Aligned_cols=149  Identities=13%  Similarity=0.034  Sum_probs=108.0

Q ss_pred             HHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHH
Q 014698          223 VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA  302 (420)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~  302 (420)
                      ++......+...+.........|.+ ++++|.+..+.|++.+...++..++++..|++.||+|+|         .....+
T Consensus         5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r---------~~~~~g   74 (410)
T TIGR00885         5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYK---------AGILLG   74 (410)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch---------HHHHHH
Confidence            4444555555555554445566665 667899999999999999999999999999999999964         333344


Q ss_pred             HHHhHHHHHHHhh-c-CCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHh
Q 014698          303 FLSPAVCMTLSSI-D-LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL  380 (420)
Q Consensus       303 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~  380 (420)
                      ....++...+... . .++........++.|.+.+...........+..|++++++..++.+...++|..++|.+.+.+.
T Consensus        75 ~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~  154 (410)
T TIGR00885        75 LFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI  154 (410)
T ss_pred             HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4443333333221 1 2223444555677888888777777777767778889999999999999999999999999886


Q ss_pred             c
Q 014698          381 D  381 (420)
Q Consensus       381 ~  381 (420)
                      .
T Consensus       155 ~  155 (410)
T TIGR00885       155 L  155 (410)
T ss_pred             h
Confidence            3

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=99.30  E-value=8.4e-11  Score=110.33  Aligned_cols=157  Identities=12%  Similarity=0.028  Sum_probs=102.9

Q ss_pred             hhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhc---C
Q 014698          241 LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID---L  317 (420)
Q Consensus       241 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  317 (420)
                      ....| ++++. |.+..+.++..+...++..+++++.|+++||+|+|        + .+..+....++........   .
T Consensus        49 ~~~~p-~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k--------~-~l~~~~~~~~i~~~~~~~~~~~~  117 (452)
T PRK11273         49 ALAMP-YLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPR--------V-FLPAGLILAAAVMLFMGFVPWAT  117 (452)
T ss_pred             HHhhH-HHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCc--------h-hHHHHHHHHHHHHHHHHhhhccc
Confidence            34555 45566 99999999999999999999999999999999975        2 2333333333332222221   1


Q ss_pred             CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHH-HHHhccCCceeeeehhhhHH
Q 014698          318 GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALT-GYLLDSTHSWSMSLFAPSIF  396 (420)
Q Consensus       318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~-g~l~~~~~~~~~~~~~~~~~  396 (420)
                      .+.....+..++.|++.+...+.......+.+|+++|+++.|+.+....+|+.+.+.+. ..+... .+|+..|++.++.
T Consensus       118 ~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~-~gw~~~f~i~~~~  196 (452)
T PRK11273        118 SSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF-NDWHAALYMPAFA  196 (452)
T ss_pred             ccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence            12233344446677777765555556666778999999999999999988875544443 333322 4788888877665


Q ss_pred             HHHHHHHHhhhcc
Q 014698          397 FYLTGTIVWLAFA  409 (420)
Q Consensus       397 ~~~~~~~~~~~~~  409 (420)
                      .++..++.++..+
T Consensus       197 ~~~~~~l~~~~~~  209 (452)
T PRK11273        197 AILVALFAFAMMR  209 (452)
T ss_pred             HHHHHHHHHHHcc
Confidence            5555554444444

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=99.28  E-value=3.6e-09  Score=94.32  Aligned_cols=307  Identities=14%  Similarity=0.057  Sum_probs=192.5

Q ss_pred             hhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHH
Q 014698           51 ELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF  130 (420)
Q Consensus        51 ~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~  130 (420)
                      .+....+.|..+.|++++++.+...+...+.-+ .++...+-+..+.-|++.+. ..+.++++=...|+++-.++.+...
T Consensus        58 l~~vflltd~l~Ykpviil~~~~~i~t~~lll~-~~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~r  135 (412)
T PF01770_consen   58 LLPVFLLTDYLRYKPVIILQALSYIITWLLLLF-GTSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTR  135 (412)
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-HCcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHH
Confidence            334444467777888888888887777776655 89999999999999999665 5667899988899999999999999


Q ss_pred             hhhhhHHHHHHhhHHHhhhc--cchhHHHHHHHHHHHHHHHHhhhcccCcccC---CCCcCcc-----chhhhhhhhhhh
Q 014698          131 GGLSFGSVAGLLLAPPIIEN--LGWESVFYIFGLLGIAWFSGFKILQEGETSN---GATLAPR-----SNYINMKKSLSA  200 (420)
Q Consensus       131 ~~~~~g~~~g~~l~~~l~~~--~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~~~~~~  200 (420)
                      +...+|..++..+|-.+...  .+.+...++......+..+..+++|..++..   ++...+.     +.+...+.+..+
T Consensus       136 aa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~  215 (412)
T PF01770_consen  136 AATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESS  215 (412)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCcccceeccCccccccccccccccccccccc
Confidence            99999999999999877763  3455666665555555666667788765421   1110000     000000000000


Q ss_pred             --hhhhh--ccc-------ccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhh--hCCCcchhhHHHHhhH
Q 014698          201 --SLEEM--GES-------LKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE--LSLNLTEAAWVSILPP  267 (420)
Q Consensus       201 --~~~~~--~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~  267 (420)
                        ..++.  .+.       .-..++++..++|.++.-.+-+.+...+++.+.+|.....++.  -+-+....|.+-+...
T Consensus       216 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~t  295 (412)
T PF01770_consen  216 SSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAAST  295 (412)
T ss_pred             cccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHH
Confidence              00000  000       0112345666788888888888888888888888777776654  1233344577778888


Q ss_pred             HHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhh
Q 014698          268 LASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQ  347 (420)
Q Consensus       268 ~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  347 (420)
                      +.+.++.+..|++..++.+.       ....+.......+.++++... .++.+...+..++++..+.........-+..
T Consensus       296 llgA~~al~~g~v~~~w~~~-------~~l~l~~~S~l~a~~L~lm~~-t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~  367 (412)
T PF01770_consen  296 LLGAIAALLAGYVKVNWDRW-------GELALGVFSLLQAGLLFLMSF-TGNIWVCYAGYIIFRSLYMFLITIASFQIAK  367 (412)
T ss_pred             HHHHHHHHHHhHhhcchHHH-------HHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88888888888885555432       233333333333333333333 2224444445555565555455555555556


Q ss_pred             ccCccchHHHHHHHHHhhhh
Q 014698          348 DISPEYASILLGITNTVGAV  367 (420)
Q Consensus       348 ~~~~~~~g~~~g~~~~~~~~  367 (420)
                      ....|.-|..+|+.++..-+
T Consensus       368 ~l~~e~yaLVFGiNtf~Al~  387 (412)
T PF01770_consen  368 NLSEERYALVFGINTFVALV  387 (412)
T ss_pred             hccccceeeeeeeHHHHHHH
Confidence            67778888888887765443

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=99.27  E-value=1.2e-10  Score=109.46  Aligned_cols=179  Identities=16%  Similarity=0.143  Sum_probs=133.0

Q ss_pred             hhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHH
Q 014698          216 AIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVR  295 (420)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~  295 (420)
                      .-+|||.+..+.....+.+.+......-.+-++.+. .-|+...+++.....+..++.++++|.+.||+.||        
T Consensus         5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~l-t~S~~~valv~~a~~LP~~Llsl~aG~laDr~drr--------   75 (524)
T PF05977_consen    5 APLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQL-TGSPLMVALVQAASTLPILLLSLFAGALADRFDRR--------   75 (524)
T ss_pred             ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch--------
Confidence            457799999999999998888888777777776654 67888999999999999999999999999999875        


Q ss_pred             HHHHHHHHHHhHH--HH-HHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHH
Q 014698          296 KICQTIAFLSPAV--CM-TLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVG  372 (420)
Q Consensus       296 ~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~  372 (420)
                      +.++..-.+....  .+ .+......+.+..++..++.|++.....+.....+.+.+|+++...++++.+...++...+|
T Consensus        76 rili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iG  155 (524)
T PF05977_consen   76 RILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIG  155 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhcc
Confidence            3333222222211  11 12222222344455556788888887777777888888999999999999999999999999


Q ss_pred             HHHHHHHhccCCceeeeehhhhHHHHHHHHHH
Q 014698          373 VALTGYLLDSTHSWSMSLFAPSIFFYLTGTIV  404 (420)
Q Consensus       373 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~  404 (420)
                      |.++|.++... +....|.+-++..++....+
T Consensus       156 PalgG~Lva~~-G~~~~f~inalsfl~~i~~l  186 (524)
T PF05977_consen  156 PALGGILVAFF-GAAAAFLINALSFLISILAL  186 (524)
T ss_pred             chHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence            99999999876 56667777666555444333

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=99.27  E-value=1.5e-10  Score=112.67  Aligned_cols=131  Identities=13%  Similarity=0.044  Sum_probs=97.1

Q ss_pred             hhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCc
Q 014698          241 LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLP  320 (420)
Q Consensus       241 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (420)
                      ...+|.+ ++.+|.+..+.+++.+...++.+++.+++|+++||+|||        +.+ ..+.++..++.++..... +.
T Consensus       187 s~ilp~i-~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR--------~~l-ii~lil~~i~~ll~afa~-s~  255 (742)
T TIGR01299       187 GFVLPSA-EKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRK--------QCL-LICLSVNGFFAFFSSFVQ-GY  255 (742)
T ss_pred             HHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH--------HHH-HHHHHHHHHHHHHHHHHh-hH
Confidence            3344544 445799999999999999999999999999999999974        222 233333333333333322 24


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc
Q 014698          321 HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS  382 (420)
Q Consensus       321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~  382 (420)
                      ..+++.-++.|++.+...+.....+.+..|++.|++..++.+....+|.++++.+...+...
T Consensus       256 ~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~  317 (742)
T TIGR01299       256 GFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPH  317 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            44555567888888888877778888888999999999999999999999999887776643

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=99.26  E-value=3e-09  Score=92.20  Aligned_cols=230  Identities=16%  Similarity=0.098  Sum_probs=150.7

Q ss_pred             hhhhccccccchhhhhHHhHH---hhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccch
Q 014698           30 KWVGLRIGRRGRIYLKDTNLL---ELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSP  106 (420)
Q Consensus        30 ~~l~~~~g~~~~l~~~~~~~~---~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~  106 (420)
                      ..-+-..+++..++..++...   +.+.+.+.|++||||..+.-+++.++.++..  ..++++.++++|++.|++.+..+
T Consensus        62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k--~~~~~~~L~~GRvlgGiaTSLLf  139 (354)
T PF05631_consen   62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK--HSSNYPVLLLGRVLGGIATSLLF  139 (354)
T ss_pred             HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH--hccccHHHHHHHHHHHHHHHHHH
Confidence            333444445566666555544   5556666999999999999999999998755  37999999999999999998888


Q ss_pred             hhhHHH-HHhcC----CccccchhhHHHH-hhhhhHHHHHHhhHHHhhhccch--hHHHHHHHHHHHHHHHH-hhhcccC
Q 014698          107 SAATDL-IARSI----PLEERSRAVSFVF-GGLSFGSVAGLLLAPPIIENLGW--ESVFYIFGLLGIAWFSG-FKILQEG  177 (420)
Q Consensus       107 ~~~~~~-i~~~~----~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~l~~~~gw--r~~f~~~~~~~~~~~~~-~~~~~~~  177 (420)
                      .+--++ +.|.-    |++..+..++... ..+++-.+.+..++.++.+..+.  ..+|....+..++..+. ....+|+
T Consensus       140 S~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~EN  219 (354)
T PF05631_consen  140 SAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPEN  219 (354)
T ss_pred             HHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhccccc
Confidence            776664 45543    3333344444333 33444556666677777776554  77888777766664433 3344555


Q ss_pred             cccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhh-hhhhHhhhhhCCCc
Q 014698          178 ETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS-WLPTYFSEELSLNL  256 (420)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~  256 (420)
                      ..+..++ .+..          +..        ...++.+.+||+++.+.+...+.-...|.+.. |.|..-.+   -+.
T Consensus       220 yg~~~~~-~~~~----------~~~--------~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~---~~~  277 (354)
T PF05631_consen  220 YGDTSSS-SSLS----------GSF--------REAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPD---DEE  277 (354)
T ss_pred             CCCcccc-cchH----------HHH--------HHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCC---CCC
Confidence            4322111 1100          000        01145677799999999999999999888877 67766522   123


Q ss_pred             chhhHHHHhhHHHHHHHHHhhhhhhhh
Q 014698          257 TEAAWVSILPPLASVLVTSIAAQFADN  283 (420)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~g~l~dr  283 (420)
                      .-.|++++...++.++|+.+..++..|
T Consensus       278 ~P~GlIFssFM~a~MlGS~lf~~l~s~  304 (354)
T PF05631_consen  278 LPLGLIFSSFMVAMMLGSSLFSRLLSK  304 (354)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence            347889999889999998887655544

>PRK03893 putative sialic acid transporter; Provisional

Probab=99.25  E-value=2.6e-10  Score=108.60  Aligned_cols=160  Identities=11%  Similarity=0.015  Sum_probs=115.5

Q ss_pred             HHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHH
Q 014698          222 AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTI  301 (420)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~  301 (420)
                      .+....+..+...+.........|.+. +++|.++.+.++..+...++..++.++.|++.||+|+|        + ....
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r--------~-~~~~   90 (496)
T PRK03893         21 AFSAAWLGYLLDGFDFVLITLVLTEVQ-GEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRR--------L-AMVI   90 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH--------H-HHHH
Confidence            344445555555555555555666655 55799999999999999999999999999999999964        2 2333


Q ss_pred             HHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc
Q 014698          302 AFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD  381 (420)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~  381 (420)
                      +.....+......... +.....+..++.|++.+...........+.+|+++|+++.++.+....+|..++|.+.+.+.+
T Consensus        91 ~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~  169 (496)
T PRK03893         91 SIVLFSVGTLACGFAP-GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVP  169 (496)
T ss_pred             HHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3333333333333322 234445555777887776677777777788899999999999999999999999999999998


Q ss_pred             cCCceeeeehhh
Q 014698          382 STHSWSMSLFAP  393 (420)
Q Consensus       382 ~~~~~~~~~~~~  393 (420)
                      .. +|+..|.+.
T Consensus       170 ~~-~w~~~f~~~  180 (496)
T PRK03893        170 VW-GWRALFFIG  180 (496)
T ss_pred             cC-CHHHHHHHH
Confidence            75 788777653

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=99.24  E-value=1.3e-10  Score=110.21  Aligned_cols=134  Identities=9%  Similarity=-0.027  Sum_probs=99.2

Q ss_pred             HHhhhhcchhhhcchhHHHHHHHHHHHHHHHHH-H-HhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhh
Q 014698           49 LLELLRLPLLFVTWIRKVLQTGVLIWSLATALL-P-LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAV  126 (420)
Q Consensus        49 ~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~-~-~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~  126 (420)
                      ++.++.+++.||++||+++..+.++..+..... . ..+++...+++++++.|++.+........++.|.+|++.|++++
T Consensus       301 ~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~  380 (490)
T PRK10642        301 FVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSAL  380 (490)
T ss_pred             HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHH
Confidence            345567788999999999888776544433321 1 11455677888999998877766677788899999999999999


Q ss_pred             HHHHhhhhhHHHHHHhhHHHhhhcc-chhHHHHHHHHHHHHHHHHhhhcccCcccCC
Q 014698          127 SFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIFGLLGIAWFSGFKILQEGETSNG  182 (420)
Q Consensus       127 ~~~~~~~~~g~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~  182 (420)
                      +.......++..++|.+.+++.+.. +|+.+++...+.+++..+..+++||++++..
T Consensus       381 g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~  437 (490)
T PRK10642        381 AAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETANRPL  437 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccCCCC
Confidence            9755555666788899988888754 4787877777777776666777899877644

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=99.24  E-value=4.6e-11  Score=109.52  Aligned_cols=167  Identities=12%  Similarity=0.005  Sum_probs=116.8

Q ss_pred             HHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHH
Q 014698          231 FCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCM  310 (420)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (420)
                      ++.......+....|. +++++|.+..+.+++.+...++..++.++.|+++||+|+|         ..+..+.....+..
T Consensus         5 ~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r---------~~~~~~~~~~~~~~   74 (379)
T TIGR00881         5 AAYYLVRKNFALAMPY-LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPR---------VFLPIGLILCAIVN   74 (379)
T ss_pred             hHHHHhHHhhhhhhHH-HHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCe---------ehhHHHHHHHHHHH
Confidence            3344445555556665 4556799999999999999999999999999999999975         22333333333333


Q ss_pred             HHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHH-HHHHHhccCCceeee
Q 014698          311 TLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVA-LTGYLLDSTHSWSMS  389 (420)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~-~~g~l~~~~~~~~~~  389 (420)
                      .+..... +.....+..++.|++.+...+.......+..|+++|+++.++.+....+|..++|. +.+.+.+. .+++..
T Consensus        75 ~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~  152 (379)
T TIGR00881        75 LFFGFST-SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL-YSWHWV  152 (379)
T ss_pred             HHHHHhh-hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc-CCchhH
Confidence            3333332 24445555577788777677777777778889999999999999999999999994 55555555 478878


Q ss_pred             ehhhhHHHHHHHHHHhhhcc
Q 014698          390 LFAPSIFFYLTGTIVWLAFA  409 (420)
Q Consensus       390 ~~~~~~~~~~~~~~~~~~~~  409 (420)
                      +.+.+++.++..+..+...+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~  172 (379)
T TIGR00881       153 FIVPGIIAIIVSLICFLLLR  172 (379)
T ss_pred             HHHHHHHHHHHHHHHheeeC
Confidence            87766655555554444443

>PRK12307 putative sialic acid transporter; Provisional

Probab=99.24  E-value=2.3e-10  Score=106.80  Aligned_cols=161  Identities=9%  Similarity=0.068  Sum_probs=115.3

Q ss_pred             HHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHH
Q 014698          222 AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTI  301 (420)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~  301 (420)
                      .+....+..+.............|.+ ++++|.++.+.++..+...++..++.++.|+++||+|+|         ..+..
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r---------~~l~~   88 (426)
T PRK12307         19 ALFSAWLGYVFDGFDFMLIFYIMYLI-KADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRK---------PLMMW   88 (426)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh---------HHHHH
Confidence            34444445555445555554555544 456799999999999999999999999999999999964         33333


Q ss_pred             HHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc
Q 014698          302 AFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD  381 (420)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~  381 (420)
                      +.....+......... +.....+.-++.|++.+...+.......+..|+++|+++.++......+|..+++.+.+.+.+
T Consensus        89 ~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~  167 (426)
T PRK12307         89 SIVAYSVGTGLSGLAS-GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE  167 (426)
T ss_pred             HHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc
Confidence            4443333333333322 244445555777888777777777777788899999999999999999999999999998888


Q ss_pred             cCCceeeeehhhh
Q 014698          382 STHSWSMSLFAPS  394 (420)
Q Consensus       382 ~~~~~~~~~~~~~  394 (420)
                      .. +|+..+++..
T Consensus       168 ~~-~w~~~f~i~~  179 (426)
T PRK12307        168 AY-GWRAAFFVGL  179 (426)
T ss_pred             cC-CHHHHHHHHH
Confidence            75 7887776643

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=99.23  E-value=4.7e-10  Score=103.25  Aligned_cols=147  Identities=14%  Similarity=0.159  Sum_probs=109.0

Q ss_pred             HHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcC
Q 014698          238 YTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDL  317 (420)
Q Consensus       238 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (420)
                      ......+|...+ ++|.|..+.++..+...++..++++..|++.||+|+|         .....+....+++.......+
T Consensus        26 ~~~~~~lp~i~~-~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r---------~~l~~~~~l~~~~~~~~~~a~   95 (393)
T PRK09705         26 TSVGPLLPQLRQ-ASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSER---------RSVAISLLLIAVGALMRELYP   95 (393)
T ss_pred             hccchhHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCch---------HHHHHHHHHHHHHHHHHHHCc
Confidence            444556676554 5799999999999999999999999999999999964         444555555555555555444


Q ss_pred             CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHH
Q 014698          318 GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIF  396 (420)
Q Consensus       318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~  396 (420)
                      + .......-++.|++.+...........+.. +++|++++|..+.....|..+++.+.+.+.++..+|+..+...++.
T Consensus        96 ~-~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~  172 (393)
T PRK09705         96 Q-SALLLSSALLGGVGIGIIQAVMPSVIKRRF-QQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALP  172 (393)
T ss_pred             c-hHHHHHHHHHHHhHHHHHhhhhhHHHHHHc-cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence            3 444555567788888866665555555555 4889999999999999999999999999988765677666554443

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.23  E-value=5.4e-10  Score=103.28  Aligned_cols=165  Identities=11%  Similarity=0.037  Sum_probs=113.0

Q ss_pred             HHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhh-----hhcCcchHHHHHHHHHHH
Q 014698          228 YAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL-----IATGVETTMVRKICQTIA  302 (420)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----~~~~~~~~~~~~~~~~~~  302 (420)
                      ..++.+.........-+|.|++++ |+|.++.|++......  .+..++.|+++||+     |||       |+++....
T Consensus         6 ~l~~~~~~~~~~~~~~~~~~l~~~-g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~r-------r~~l~~~~   75 (402)
T PRK11902          6 LLGFASGLPLALTSGTLQAWMTVE-GLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRR-------RGWLLLTQ   75 (402)
T ss_pred             HHHHHHhhhHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcc-------hhHHHHHH
Confidence            345555666666777999999986 9999999998655544  58889999999999     654       33333333


Q ss_pred             HHHhHHHHHHHhhcCCCcHH-HHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc
Q 014698          303 FLSPAVCMTLSSIDLGLPHW-EIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD  381 (420)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~  381 (420)
                      .........+.........+ .....++.+.......+.......+..|+|+|+++.++......+|..+++.+.+.+.+
T Consensus        76 ~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~  155 (402)
T PRK11902         76 VGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLAD  155 (402)
T ss_pred             HHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence            33322222222222222233 22233445555555556666677777889999999999999889999999999999988


Q ss_pred             cCCceeeeehhhhHHHHHHHH
Q 014698          382 STHSWSMSLFAPSIFFYLTGT  402 (420)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~~~~  402 (420)
                      ...+|+..|++.++..++...
T Consensus       156 ~~~gw~~~f~i~a~~~l~~~l  176 (402)
T PRK11902        156 RVLGWGNTYLLMAGLMLAGAL  176 (402)
T ss_pred             cccCHHHHHHHHHHHHHHHHH
Confidence            645788888887765554433

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=99.23  E-value=1.3e-10  Score=106.35  Aligned_cols=161  Identities=12%  Similarity=0.008  Sum_probs=108.2

Q ss_pred             HHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhh
Q 014698          236 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI  315 (420)
Q Consensus       236 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (420)
                      ..+......|.+. +++|.+..+.++..+...++..+++++.|+++||+|||       +.  ...+.....+.......
T Consensus        18 ~~~~~~~~~~~~~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r-------~~--~~~~~~~~~~~~~~~~~   87 (377)
T TIGR00890        18 YVYTWTLLAPPLG-RYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPR-------AV--AMLGGILYGLGFTFYAI   87 (377)
T ss_pred             HHhhhhhHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCcc-------ch--hHHhHHHHHHHHHHHHH
Confidence            3444455555555 45799999999999999999999999999999999975       22  22333333333333333


Q ss_pred             cCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhH
Q 014698          316 DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSI  395 (420)
Q Consensus       316 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~  395 (420)
                      .+ +.....+...+.|++.+...........+.. +++|+++.+.......+|..+++++.+.+.+.. +|+..|.+.++
T Consensus        88 ~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~f~~~~~  164 (377)
T TIGR00890        88 AD-SLAALYLTYGLASAGVGIAYGIALNTAVKWF-PDKRGLASGIIIGGYGLGSFILSPLITSVINLE-GVPAAFIYMGI  164 (377)
T ss_pred             HH-HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHc-CcccHHHHHHHHHhcchhHhHHHHHHHHHHhcc-cHHHHHHHHHH
Confidence            22 2333344445667766654444444444434 578999999999999999988888888777764 78888888777


Q ss_pred             HHHHHHHHHhhhcc
Q 014698          396 FFYLTGTIVWLAFA  409 (420)
Q Consensus       396 ~~~~~~~~~~~~~~  409 (420)
                      ..++.....+...+
T Consensus       165 ~~~~~~~~~~~~~~  178 (377)
T TIGR00890       165 IFLLVIVLGAFLIG  178 (377)
T ss_pred             HHHHHHHHHHHhee
Confidence            66665555554443

>PRK10133 L-fucose transporter; Provisional

Probab=99.22  E-value=1.3e-09  Score=101.43  Aligned_cols=149  Identities=11%  Similarity=0.055  Sum_probs=107.2

Q ss_pred             HHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHH
Q 014698          222 AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTI  301 (420)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~  301 (420)
                      .+....+..+...+.........|.+ ++.+|.|+.+.++..+...++..+++++.|++.||+|+|         ..+..
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r---------~~l~~   96 (438)
T PRK10133         27 PFALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYK---------AGIIT   96 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---------HHHHH
Confidence            44455555666666666677788877 677899999999999999999999999999999999964         33334


Q ss_pred             HHHHhHHHHHHHh--hcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698          302 AFLSPAVCMTLSS--IDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYL  379 (420)
Q Consensus       302 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l  379 (420)
                      +.....+...+..  ...++.....+..++.|++.+.........+.+..++++++...+..+....+|..++|.+++.+
T Consensus        97 g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l  176 (438)
T PRK10133         97 GLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL  176 (438)
T ss_pred             HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4444444433321  12233445555668888888877777777666544445555689999999999999999988766


Q ss_pred             h
Q 014698          380 L  380 (420)
Q Consensus       380 ~  380 (420)
                      .
T Consensus       177 ~  177 (438)
T PRK10133        177 I  177 (438)
T ss_pred             H
Confidence            5

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=99.21  E-value=4.4e-10  Score=105.38  Aligned_cols=154  Identities=14%  Similarity=0.079  Sum_probs=104.6

Q ss_pred             HhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCC
Q 014698          240 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGL  319 (420)
Q Consensus       240 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (420)
                      ...+.|.+.+ .+|.+..+.++..+...+...++.++.|+++||+++|       +  .+..+...............+ 
T Consensus        38 ~~~~~~~i~~-~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r-------~--~l~~~~~~~~~~~~~~~~~~~-  106 (455)
T TIGR00892        38 VTVFFKELQQ-IFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCR-------P--VVIAGGLLASLGMILASFSSN-  106 (455)
T ss_pred             hhhhHHHHHH-HhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCch-------H--HHHhhHHHHHHHHHHHHHhhh-
Confidence            3445666555 5799999999999998888889999999999999974       2  222333333333333323222 


Q ss_pred             cHHHHHHH-HHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHH
Q 014698          320 PHWEIVGI-LTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFY  398 (420)
Q Consensus       320 ~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~  398 (420)
                      ........ ++.|++.+...++......+.+ +++|+++.|+.+....+|..++|.+.+.+.+.. +|+..|++.+++.+
T Consensus       107 ~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~-gwr~~f~~~~~~~~  184 (455)
T TIGR00892       107 VIELYLTAGFITGLGLAFNFQPSLTMLGKYF-YRRRPLANGLAMAGSPVFLSTLAPLNQYLFESF-GWRGSFLILGGLLL  184 (455)
T ss_pred             HHHHHHHHHHHHHhcchhhhhHHHHHHHHHH-HhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHH
Confidence            22222222 4556666644444444444445 578999999999999999999999999999886 79999988877665


Q ss_pred             HHHHHHhh
Q 014698          399 LTGTIVWL  406 (420)
Q Consensus       399 ~~~~~~~~  406 (420)
                      ++.+..++
T Consensus       185 ~~~v~~~~  192 (455)
T TIGR00892       185 HCCVCGAL  192 (455)
T ss_pred             HHHHHHHH
Confidence            55444333

>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]

Probab=99.21  E-value=3.6e-11  Score=106.34  Aligned_cols=182  Identities=11%  Similarity=0.101  Sum_probs=137.2

Q ss_pred             HHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHH
Q 014698          222 AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTI  301 (420)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~  301 (420)
                      ....+.+.......--+.+-...+. .++.++.++...|++.....+...+.+++.|++.||+.|+         .++..
T Consensus        34 ~l~il~~vnlmny~Dr~~iagv~~~-v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~---------~v~~v  103 (493)
T KOG1330|consen   34 TLVILCLVNLMNYADRYTIAGVLKE-VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRK---------RVIAV  103 (493)
T ss_pred             HHHHHHHHHHHHHhhhhhhhhhhHH-HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcc---------eEEee
Confidence            3444444555544444444443332 3456799999999999999999999999999999999954         44444


Q ss_pred             HHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc
Q 014698          302 AFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD  381 (420)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~  381 (420)
                      +..+-....+..... .+.+...+.=.+.|++.....+.....+.+.+|.++|++++++.+....+|+.+|-..++.+.+
T Consensus       104 G~~iW~~Av~~~~fs-~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~  182 (493)
T KOG1330|consen  104 GIFIWTLAVFASGFS-NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVAS  182 (493)
T ss_pred             HHHHHHHHHHHHHHH-HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeecc
Confidence            444433333333332 1133333333788999998999999999999999999999999999999999999999999999


Q ss_pred             cCCceeeeehhhhHHHHHHHHHHhhhccCCCCC
Q 014698          382 STHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQ  414 (420)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (420)
                      +.+.|+++|...++..++++++.+++.+++++.
T Consensus       183 ~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rg  215 (493)
T KOG1330|consen  183 LTFWWRWAFRGSAVLGVIVGLLVFLFVREPERG  215 (493)
T ss_pred             CccceEEEEEeehHHHHHHHHHHHhhccCcccc
Confidence            887799999999999999999888888776653

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.20  E-value=1.3e-09  Score=103.03  Aligned_cols=179  Identities=12%  Similarity=0.069  Sum_probs=123.0

Q ss_pred             hhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhh-----hhcCcch
Q 014698          217 IFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL-----IATGVET  291 (420)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----~~~~~~~  291 (420)
                      ..++|+........+............+|.++++. |.|..+.+.. +..+... +..++.+.++||+     |||    
T Consensus         8 ~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~-g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grr----   80 (491)
T PRK11010          8 IFQQPNSAILLILGFASGLPLALTSGTLQAWMTVE-NIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRR----   80 (491)
T ss_pred             HHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCc----
Confidence            34466677777777777777878888999999885 9999999886 3333332 5889999999999     764    


Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHhhcCC-CcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHH
Q 014698          292 TMVRKICQTIAFLSPAVCMTLSSIDLG-LPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGI  370 (420)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~  370 (420)
                         |.++.............+....+. +........++.+++.+...........+..|+++|+++.++......+|..
T Consensus        81 ---r~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~l  157 (491)
T PRK11010         81 ---RGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAML  157 (491)
T ss_pred             ---hHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHH
Confidence               333333333322222222222222 2233343445666666666666666677778999999999999999999999


Q ss_pred             HHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHh
Q 014698          371 VGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVW  405 (420)
Q Consensus       371 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (420)
                      +++.+.+.+.+...+|+..|++.++..++.....+
T Consensus       158 lg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~  192 (491)
T PRK11010        158 VSGGLALWLADRYLGWQGMYWLMAALLIPCIIATL  192 (491)
T ss_pred             HHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998434899999887766555544333

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.19  E-value=6.6e-10  Score=101.93  Aligned_cols=160  Identities=13%  Similarity=0.026  Sum_probs=107.7

Q ss_pred             HHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHH
Q 014698          224 WAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAF  303 (420)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~  303 (420)
                      +...+.++....+......++|.|+++ +|.|..+.|+..+...+...+++++.+.++||++|+.    ..++.......
T Consensus         7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~-~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~----~~~~~~~~~~~   81 (382)
T TIGR00902         7 RWLALGFFGYFCAYGIFLPFFPAWLKG-IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHII----IALRLLALASA   81 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHH----HHHHHHHHHHH
Confidence            335556666667777778899999987 5999999999999999999999999999999998531    01111111111


Q ss_pred             HHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698          304 LSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST  383 (420)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~  383 (420)
                      +. .  ..... ..++.+...+...+.+.+.+...+...... .+ .+++|+++.|.......+|..++|.+.|.+.++.
T Consensus        82 l~-~--~~~~~-~~~~~~~l~~~~~l~~~~~~~~~p~~~al~-~~-~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~  155 (382)
T TIGR00902        82 IF-A--AAFSA-GAHNAWLLFIAIGLFALFFSAGMPIGDALA-NT-WQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMF  155 (382)
T ss_pred             HH-H--HHHHH-hhhhHHHHHHHHHHHHHHHccchhHHHHHH-HH-HHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            11 1  11111 122233333333445666554444433333 33 3577899999999999999999999999999986


Q ss_pred             CceeeeehhhhH
Q 014698          384 HSWSMSLFAPSI  395 (420)
Q Consensus       384 ~~~~~~~~~~~~  395 (420)
                       +|+..|.+.+.
T Consensus       156 -g~~~~f~~~~~  166 (382)
T TIGR00902       156 -DEQNILAILTA  166 (382)
T ss_pred             -ChhHHHHHHHH
Confidence             68877766544

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=99.19  E-value=7.7e-10  Score=104.41  Aligned_cols=149  Identities=13%  Similarity=0.091  Sum_probs=109.6

Q ss_pred             hhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhh-cCCCcHHHHHHHHH
Q 014698          251 ELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI-DLGLPHWEIVGILT  329 (420)
Q Consensus       251 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  329 (420)
                      +++++..+.|.+.+...++..+++++.|++.||+|+|        + .+..+.+...+...+... ........++.-++
T Consensus        70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r--------~-~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~  140 (465)
T TIGR00894        70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFK--------W-SIGIGMFLSSVISIVIPWAAGGGIALVVFCRVI  140 (465)
T ss_pred             CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcc--------h-hhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence            4688999999999999999999999999999999975        2 222232222222222211 11223344445577


Q ss_pred             HHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhc
Q 014698          330 AGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAF  408 (420)
Q Consensus       330 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (420)
                      .|++.+...+.......+..|+++|+++.|+.+....+|..++|.+.+.+.+...+|+..|++.++..++..++.+...
T Consensus       141 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~  219 (465)
T TIGR00894       141 QGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFP  219 (465)
T ss_pred             HHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHh
Confidence            8888887777777778888899999999999999999999999999999988733789899888776655554444443

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=99.19  E-value=1.8e-08  Score=89.91  Aligned_cols=311  Identities=14%  Similarity=0.095  Sum_probs=166.5

Q ss_pred             hhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHH
Q 014698           51 ELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF  130 (420)
Q Consensus        51 ~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~  130 (420)
                      -+..+...++...+.-......+..++.++.++ +++.+.=+++-.+.+++.|........+.+ .+++    ...+-++
T Consensus        76 Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~-~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~~----~~l~~ws  149 (402)
T PF02487_consen   76 KLIAPFFIHRVPYWIRILICVALSAAGMLLVAF-SPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FYGK----SSLSAWS  149 (402)
T ss_pred             HHHhHhhhhhccchHHHHHHHHHHHHHHhheee-ccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hcCc----ccccccc
Confidence            344444466665333344455566667777765 899998889999999998888877777644 5553    3567788


Q ss_pred             hhhhhHHHHHHhhHHHhhhccch--hHHHHHHHHHHHHHHHHhhh-cccCcccCCCCcCccchhhhhhhhhhhhhhhhcc
Q 014698          131 GGLSFGSVAGLLLAPPIIENLGW--ESVFYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGE  207 (420)
Q Consensus       131 ~~~~~g~~~g~~l~~~l~~~~gw--r~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (420)
                      ++.+.+.++|+..-..+.+ .|+  |..+.+...+.++..+.+++ +|++++.+..++.+.+....++....+..++..+
T Consensus       150 sGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (402)
T PF02487_consen  150 SGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESEDEAEDDLLESETSESKPD  228 (402)
T ss_pred             CCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCCccccccccccccccccc
Confidence            8888888888887766666 554  77777777766655544444 4433322211111111100000000000000001


Q ss_pred             cccccchhhhhh-cHHHHHHHHHHHHhHHHHHHHhh-hhhhHhhh-hhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhh
Q 014698          208 SLKDVPWKAIFR-SKAVWAMIYAHFCGSWGHYTCLS-WLPTYFSE-ELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL  284 (420)
Q Consensus       208 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~  284 (420)
                      ...+.++++-++ -|......+-.+..++..|.++. ..|...-. ...-..++..++...+.++..+++--...+  |+
T Consensus       229 ~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri  306 (402)
T PF02487_consen  229 SSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLLYQLGVFISRSSLPFF--RI  306 (402)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHHHHHHHhhhhcceeee--eh
Confidence            111122222221 23333344444555556665544 44443322 212223344555566666666655432221  22


Q ss_pred             hhcCcchHHHHHHHHHHHHHH-hHHHHHHHhh-cCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHH
Q 014698          285 IATGVETTMVRKICQTIAFLS-PAVCMTLSSI-DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITN  362 (420)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~  362 (420)
                      .         +.+.....-.. .++..+-... ...+.+..++.++..|+..|.........+.++.++++|..++|...
T Consensus       307 r---------~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vs  377 (402)
T PF02487_consen  307 R---------RLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVS  377 (402)
T ss_pred             h---------hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence            1         21221111111 1111111111 11223444455677888888888888888888999999999999999


Q ss_pred             HhhhhhHHHHHHHHHHH
Q 014698          363 TVGAVPGIVGVALTGYL  379 (420)
Q Consensus       363 ~~~~~g~~~~~~~~g~l  379 (420)
                      .....|..++..++-.+
T Consensus       378 vsds~GI~lAgll~l~l  394 (402)
T PF02487_consen  378 VSDSLGILLAGLLGLPL  394 (402)
T ss_pred             HHhhHHHHHHHHHHHHH
Confidence            88888888877665443

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>KOG3098 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.19  E-value=7.3e-09  Score=93.96  Aligned_cols=313  Identities=15%  Similarity=0.089  Sum_probs=189.9

Q ss_pred             hhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCcc
Q 014698           41 RIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE  120 (420)
Q Consensus        41 ~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~  120 (420)
                      .+.-..+.+..++.+++.+..++|..+.++...+.......  +-.|-+-++....+.|+|.+..+.....+++|..+++
T Consensus        57 aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gf--l~~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~  134 (461)
T KOG3098|consen   57 AIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGF--LFPNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE  134 (461)
T ss_pred             HHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHH--HhcchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence            34455666779999999999999999999999999887765  3556678899999999999999999999999999999


Q ss_pred             ccchhhHHHHhhhhhHHHHHHhhHHHhhhc--------cchh-H----------HHHHHHHH---HHHHHHHhhhcccCc
Q 014698          121 ERSRAVSFVFGGLSFGSVAGLLLAPPIIEN--------LGWE-S----------VFYIFGLL---GIAWFSGFKILQEGE  178 (420)
Q Consensus       121 ~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~--------~gwr-~----------~f~~~~~~---~~~~~~~~~~~~~~~  178 (420)
                      ++.+..++..+....+.++|..+-..+...        .+-+ .          ...+.+++   ..+..+...+.|.+.
T Consensus       135 tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~  214 (461)
T KOG3098|consen  135 TIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSKD  214 (461)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCccc
Confidence            999999999999999988887665333221        0111 0          11111111   111122222222222


Q ss_pred             ccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhh--hCCCc
Q 014698          179 TSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE--LSLNL  256 (420)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~  256 (420)
                      ....++..+        ....+..         ....+++++|+...+....+..+....-.....|..+.-.  .+.+.
T Consensus       215 ~~~~~~~~~--------~~~~~~l---------~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~  277 (461)
T KOG3098|consen  215 VVNCKSSSE--------TSFSELL---------KLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNT  277 (461)
T ss_pred             hhhhhhhcc--------ccHHHHH---------HHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcc
Confidence            111111100        0000000         1123566788887777666665555545555566554332  22222


Q ss_pred             -chhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhh--cCCC--------------
Q 014698          257 -TEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI--DLGL--------------  319 (420)
Q Consensus       257 -~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--------------  319 (420)
                       ...+......+++.+.+....+.+.+|..+.+      ++..+..+..+......+...  +.+.              
T Consensus       278 ~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg------~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~  351 (461)
T KOG3098|consen  278 TYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFG------RKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTP  351 (461)
T ss_pred             hhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcc------cCcchhHHHHHHHHHHHHHhccccccCCCCCCccccccccc
Confidence             23345556667777777788888888876554      333333333332222222211  1111              


Q ss_pred             -cHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698          320 -PHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYL  379 (420)
Q Consensus       320 -~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l  379 (420)
                       .....+..++.|++-.+........+.... |++|..+.++...-+.+++.++-...+..
T Consensus       352 ~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~  411 (461)
T KOG3098|consen  352 SYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL  411 (461)
T ss_pred             chhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence             123344446678877766666666666555 88899999998888888777766555443

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.17  E-value=4.4e-10  Score=101.82  Aligned_cols=166  Identities=17%  Similarity=0.182  Sum_probs=124.5

Q ss_pred             HHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHH
Q 014698          226 MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLS  305 (420)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~  305 (420)
                      .....+.............|.+.++ +|.++.+.+...+...++..++.++.|++.||+|||       +  ....+...
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r-------~--~~~~~~~~   73 (352)
T cd06174           4 LFLGFFLSGLDRGLLSPALPLLAED-LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRR-------R--VLLLGLLL   73 (352)
T ss_pred             HHHHHHHHHHhhhhhHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCc-------h--hhHHHHHH
Confidence            4455566667777777888888876 499999999999999999999999999999999975       2  33333333


Q ss_pred             hHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCc
Q 014698          306 PAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHS  385 (420)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~  385 (420)
                      ..+........ ++.....+..++.|.+.+...+.......+..|+|+|++..++.+....+|..++|.+.+.+.+.. +
T Consensus        74 ~~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~  151 (352)
T cd06174          74 FALGSLLLAFA-SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL-G  151 (352)
T ss_pred             HHHHHHHHHHh-ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh-h
Confidence            33333333332 234445555577788877777777777778888899999999999999999999999999999885 6


Q ss_pred             eeeeehhhhHHHHHHHHH
Q 014698          386 WSMSLFAPSIFFYLTGTI  403 (420)
Q Consensus       386 ~~~~~~~~~~~~~~~~~~  403 (420)
                      ++..+.+.+...++..+.
T Consensus       152 ~~~~~~~~~~~~~~~~~~  169 (352)
T cd06174         152 WRWLFLILAILGLLLALL  169 (352)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            777777766655554443

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=99.17  E-value=3.8e-10  Score=106.38  Aligned_cols=158  Identities=13%  Similarity=0.006  Sum_probs=106.7

Q ss_pred             HhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh----h
Q 014698          240 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS----I  315 (420)
Q Consensus       240 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~  315 (420)
                      +....|.+. +++|.+..+.|++.+...++..+++++.|+++||+|+|+         .+..+.+..++......    .
T Consensus        48 ~~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~---------~l~~~~~~~~~~~~~~~~~~~~  117 (467)
T PRK09556         48 FKAAQNDMI-STYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQ---------FLPFLLILSAICMLGFGASLGS  117 (467)
T ss_pred             hhhhhHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccc---------hHHHHHHHHHHHHHHHHHHHhc
Confidence            344466655 457999999999999999999999999999999999752         22222222111111111    1


Q ss_pred             cCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC--Cceeeeehhh
Q 014698          316 DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST--HSWSMSLFAP  393 (420)
Q Consensus       316 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~--~~~~~~~~~~  393 (420)
                      ..++.....+.-++.|++.+...+.....+.+.+|+++||++.|+.+....+|.++++.+...+.+..  ++++..|.+.
T Consensus       118 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~  197 (467)
T PRK09556        118 GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFP  197 (467)
T ss_pred             ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHH
Confidence            11223334444467788777667777777778889999999999999999999999999887776642  2466666665


Q ss_pred             hHHHHHHHHHHhhh
Q 014698          394 SIFFYLTGTIVWLA  407 (420)
Q Consensus       394 ~~~~~~~~~~~~~~  407 (420)
                      ++..++.+++.+..
T Consensus       198 g~~~~~~~i~~~~~  211 (467)
T PRK09556        198 SIIALIIGFIGLRY  211 (467)
T ss_pred             HHHHHHHHHHHHHh
Confidence            55555444444443

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=99.16  E-value=6.8e-08  Score=87.89  Aligned_cols=251  Identities=10%  Similarity=0.003  Sum_probs=147.2

Q ss_pred             CccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHH-hhh---cccCcccCCCCcC----ccc
Q 014698          118 PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG-FKI---LQEGETSNGATLA----PRS  189 (420)
Q Consensus       118 ~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~----~~~  189 (420)
                      +++++.+.++...-.-....+++|++.|.+.+..+.+....+.+...++.... +++   +-+..|..+.+++    +.+
T Consensus       143 ~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~  222 (432)
T PF06963_consen  143 DPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESS  222 (432)
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCcccccc
Confidence            34567788888888888999999999999999889888887777766653321 111   1111111111111    111


Q ss_pred             hhhh---hhhhhhhhhhhhc--ccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHH
Q 014698          190 NYIN---MKKSLSASLEEMG--ESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI  264 (420)
Q Consensus       190 ~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  264 (420)
                      +...   .++......++..  -+.....|+..+++|.+.......++ ++..-++...+..|+.++ |+++...|..-+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalL-Y~TVLsf~~lmt~yl~~~-G~s~~~igi~R~  300 (432)
T PF06963_consen  223 SDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALALL-YFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRG  300 (432)
T ss_pred             ccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHH-HHHHhcCcHHHHHHHHHC-CCCHHHHHHHHH
Confidence            0000   0000000000000  11113446667777766555444444 444556677888999887 999999999999


Q ss_pred             hhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHH-----HHHHHHhhhhhh
Q 014698          265 LPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGI-----LTAGLALSSFAL  339 (420)
Q Consensus       265 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~  339 (420)
                      ...+.++.++.+..++.+|+|..|.     ..+.+..-......+...+....++....-...     .+-=+|.-++-.
T Consensus       301 ~gav~Gl~gT~~~p~l~~riGlvr~-----G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL  375 (432)
T PF06963_consen  301 LGAVFGLLGTWVYPWLMKRIGLVRA-----GLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDL  375 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcchhh-----HHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhH
Confidence            9999999999999999999996421     111111111222222222222222101112222     222234444556


Q ss_pred             hhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHH
Q 014698          340 SGLYCTHQDISPEYASILLGITNTVGAVPGIVGVAL  375 (420)
Q Consensus       340 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~  375 (420)
                      ......++.+|+++||+..|+-+..+++...+.-.+
T Consensus       376 ~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~  411 (432)
T PF06963_consen  376 AVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL  411 (432)
T ss_pred             HHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence            666777788999999999999999999877665443

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=99.16  E-value=9.4e-10  Score=115.28  Aligned_cols=167  Identities=11%  Similarity=0.094  Sum_probs=111.5

Q ss_pred             hhhhcHHHHHHHHHHHHhHHHHHHHhhhhhh----HhhhhhCC-CcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcc
Q 014698          216 AIFRSKAVWAMIYAHFCGSWGHYTCLSWLPT----YFSEELSL-NLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVE  290 (420)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~  290 (420)
                      .++++++++.+....++..++.+....-++.    .+.+..+. +....++..+...+..++.++++|+++||+++|   
T Consensus         6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk---   82 (1140)
T PRK06814          6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKA---   82 (1140)
T ss_pred             hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHH---
Confidence            5677777777766666665554433222221    12221111 123467777788889999999999999999975   


Q ss_pred             hHHHHHHHH--HHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhh
Q 014698          291 TTMVRKICQ--TIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVP  368 (420)
Q Consensus       291 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g  368 (420)
                          +....  ............  ....++.+.+++..++.|++.+...+.....+.+.++++++++++|+.++...+|
T Consensus        83 ----~~~~~~~~~~~~~~~~~~~--~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig  156 (1140)
T PRK06814         83 ----KLAKILKFAEIGIAALAIY--GFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIA  156 (1140)
T ss_pred             ----HHHHHHHHHHHHHHHHHHH--HHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHH
Confidence                22111  111111111111  1112335555666688888888888888888888899999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCceeeeehh
Q 014698          369 GIVGVALTGYLLDSTHSWSMSLFA  392 (420)
Q Consensus       369 ~~~~~~~~g~l~~~~~~~~~~~~~  392 (420)
                      ..+||.++|.+.+.. ++...|..
T Consensus       157 ~~igp~l~g~l~~~~-~~~~~~~~  179 (1140)
T PRK06814        157 ILLGTIIGGLATISG-NFVILVAL  179 (1140)
T ss_pred             HHHHHHHHHHHHhcc-ccHHHHHH
Confidence            999999999999875 67666633

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=99.14  E-value=1.3e-09  Score=95.78  Aligned_cols=178  Identities=16%  Similarity=0.154  Sum_probs=117.7

Q ss_pred             HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHH
Q 014698          221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT  300 (420)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~  300 (420)
                      |+++...+.... .+.......-+...+.+.+|+|+.|.+++.+...+.+.+.++..|.+.||+|.|        ++...
T Consensus        14 ~~L~~S~~af~v-~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR--------~~~~~   84 (417)
T COG2223          14 RNLWLSTLAFDV-GFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGR--------KWTIL   84 (417)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCch--------HHHHH
Confidence            444444444333 333334444444445577899999999999999999999999999999999974        34333


Q ss_pred             HHHHHhHHHHHHHhhcCCCc-HHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698          301 IAFLSPAVCMTLSSIDLGLP-HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYL  379 (420)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l  379 (420)
                      ...+...-++.+.....+.. +..++.-++.|++.+ ........+..-+|||++|.++|+.. .+|+|..+...+...+
T Consensus        85 s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v  162 (417)
T COG2223          85 SMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLV  162 (417)
T ss_pred             HHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHH
Confidence            33332333333222222222 233333355566554 44455556667799999999999988 9999999999999998


Q ss_pred             hccCCc--eeeeehhhhHHHHHHHHHHhhhcc
Q 014698          380 LDSTHS--WSMSLFAPSIFFYLTGTIVWLAFA  409 (420)
Q Consensus       380 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  409 (420)
                      ....+.  ++.+-.+.....++..+..++..+
T Consensus       163 ~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~  194 (417)
T COG2223         163 AVAFGFLAWRNVAGIYVVALAIAAVLAWLGMN  194 (417)
T ss_pred             HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            888642  666666666666666666666554

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.14  E-value=1.4e-09  Score=99.87  Aligned_cols=159  Identities=12%  Similarity=-0.000  Sum_probs=105.8

Q ss_pred             HHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHH
Q 014698          229 AHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAV  308 (420)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~  308 (420)
                      .++....+......++|.|+++ +|.|..+.|+..+...+...+++++.|++.||++|+..    .++........   .
T Consensus        12 ~~~~~~~~~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~----~~~~~~~~~~~---~   83 (382)
T PRK11128         12 SYFGYFFAYGVFLPFWSVWLKG-QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIP----ALRLLALLTLL---F   83 (382)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHH----HHHHHHHHHHH---H
Confidence            3555556667778899999977 59999999999999999999999999999999997411    01222211111   1


Q ss_pred             HHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceee
Q 014698          309 CMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSM  388 (420)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~  388 (420)
                      ... .....++.+...+...+.+.+.+...+..... .++. +++|+++.+.......+|..++|.+++.+.++. +++.
T Consensus        84 ~~~-~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~-~~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~-g~~~  159 (382)
T PRK11128         84 AVA-FWFGAHSFWLLFVAIGLFNLFFSPLVPLTDAL-ANTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWF-GEQA  159 (382)
T ss_pred             HHH-HHHhcccHHHHHHHHHHHHHHHcccccHHHHH-HHHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHc-ChhH
Confidence            111 11222223333333455566655454443333 3333 456788888888888999999999999999986 7888


Q ss_pred             eehhhhHHHHH
Q 014698          389 SLFAPSIFFYL  399 (420)
Q Consensus       389 ~~~~~~~~~~~  399 (420)
                      .|++.++..++
T Consensus       160 ~f~~~~~~~~~  170 (382)
T PRK11128        160 ILWILTAGVAS  170 (382)
T ss_pred             HHHHHHHHHHH
Confidence            88776654333

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=99.14  E-value=1.7e-09  Score=113.66  Aligned_cols=158  Identities=15%  Similarity=0.119  Sum_probs=110.3

Q ss_pred             hhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCc--chhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHH
Q 014698          216 AIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNL--TEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTM  293 (420)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~  293 (420)
                      ..++++.++.+.+..++..+........+..++.+.++.+.  ...+++.+...++.++++++.|+++||+|||      
T Consensus         4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk------   77 (1146)
T PRK08633          4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKN------   77 (1146)
T ss_pred             chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHH------
Confidence            45667888888777777766665555555555554455543  3357777888889999999999999999964      


Q ss_pred             HHHHHHHHHHHHhHHHH--HHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHH
Q 014698          294 VRKICQTIAFLSPAVCM--TLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIV  371 (420)
Q Consensus       294 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~  371 (420)
                         ..+..+..+..+..  .......++....++..++.|++.+...+.....+.+..|+++|++++|+.+....+|..+
T Consensus        78 ---~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~l  154 (1146)
T PRK08633         78 ---RVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILA  154 (1146)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHH
Confidence               22222222211111  1111112224445555577788888777777777888889999999999999999999999


Q ss_pred             HHHHHHHHhcc
Q 014698          372 GVALTGYLLDS  382 (420)
Q Consensus       372 ~~~~~g~l~~~  382 (420)
                      +|.+++.+.+.
T Consensus       155 g~~l~~~l~~~  165 (1146)
T PRK08633        155 GTALFSFLFES  165 (1146)
T ss_pred             HHHHHHHHHHh
Confidence            99999999876

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=99.11  E-value=4.7e-10  Score=100.53  Aligned_cols=177  Identities=16%  Similarity=0.176  Sum_probs=110.3

Q ss_pred             hhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHH
Q 014698          218 FRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKI  297 (420)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~  297 (420)
                      .||+.++......+++.+.......+.|.++++..|+|.++.|.+.+...+..++.+++.|.++||++.|       |..
T Consensus         4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~k-------K~L   76 (412)
T PF01306_consen    4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLK-------KHL   76 (412)
T ss_dssp             CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTC-------SHH
T ss_pred             ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhh-------HHH
Confidence            4588999999999999999888899999999987799999999999999999999999999999999987       333


Q ss_pred             HHHHHHHH--hHHHHH-HHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhh---hhccCccchHHHHHHHHHhhhhhHHH
Q 014698          298 CQTIAFLS--PAVCMT-LSSIDLGLPHWEIVGILTAGLALSSFALSGLYCT---HQDISPEYASILLGITNTVGAVPGIV  371 (420)
Q Consensus       298 ~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~g~~~g~~~~~~~~g~~~  371 (420)
                      +.....+.  .+.... ......+.+.  ....++.++..+....+.....   .+.. .++.+--.|=....+++|.++
T Consensus        77 l~~i~~l~~l~~pff~~v~~pll~~n~--~lg~iig~i~l~~~f~~~~~~~Ea~~er~-sr~~~feYG~~R~wGSig~ai  153 (412)
T PF01306_consen   77 LWFIAILLLLFGPFFIYVFGPLLQSNF--WLGAIIGGIYLGLVFNAGVPLSEAYAERV-SRRNGFEYGRARMWGSIGFAI  153 (412)
T ss_dssp             HHHHHHHHHTCHHHHHHTHHHHHHTT---HHHHHHTTTTTTTTTTTHHHHHHHHHHHH-HHHHSS-HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHcccchHHHHHHHHH-HHHhcCCcchHHHHhhHHHHH
Confidence            33333222  122111 1111111111  1222222333332232222221   1221 233455667778888999999


Q ss_pred             HHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhh
Q 014698          372 GVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWL  406 (420)
Q Consensus       372 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (420)
                      ++.+.|.+.+.  +.+..|++.....++..++.+.
T Consensus       154 ~s~~~G~L~~i--~p~~~fwi~s~~~~il~lll~~  186 (412)
T PF01306_consen  154 ASLLAGILFNI--NPNIIFWIASAAAIILLLLLLL  186 (412)
T ss_dssp             HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHhheeeee--CccHHHHHHHHHHHHHHHHHHH
Confidence            99999999986  4455667655444444333333

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.11  E-value=1.2e-09  Score=103.52  Aligned_cols=135  Identities=14%  Similarity=0.038  Sum_probs=96.3

Q ss_pred             cchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhh-cCCC-cHHHHHHHHHHHHH
Q 014698          256 LTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI-DLGL-PHWEIVGILTAGLA  333 (420)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~g~~  333 (420)
                      ..+.++..+...++..+++++.|+++||+|||        +.+ ..+.....+...+... .... ....++.-++.|++
T Consensus        70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr--------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~  140 (481)
T TIGR00879        70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRK--------KSL-LIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIG  140 (481)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhH--------HHH-HHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhh
Confidence            78899999999999999999999999999964        232 3333333333222222 2211 22445555778888


Q ss_pred             hhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHH---HHHhccCCceeeeehhhhHHHHHH
Q 014698          334 LSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALT---GYLLDSTHSWSMSLFAPSIFFYLT  400 (420)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~---g~l~~~~~~~~~~~~~~~~~~~~~  400 (420)
                      .+...+.....+.+..|+++|+++.++.+....+|..+++.+.   +...+.. +|+..|.+.+...++.
T Consensus       141 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~w~~~f~~~~~~~~~~  209 (481)
T TIGR00879       141 VGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTL-GWRIPLGLQLIPAGLL  209 (481)
T ss_pred             hhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCc-cHHHHHHHHHHHHHHH
Confidence            8877777777777888999999999999999999999999988   5544553 7888887755444433

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>TIGR00901 2A0125 AmpG-related permease

Probab=99.10  E-value=2.5e-09  Score=97.21  Aligned_cols=165  Identities=10%  Similarity=0.008  Sum_probs=102.8

Q ss_pred             HhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHH-HHHhhcCC
Q 014698          240 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCM-TLSSIDLG  318 (420)
Q Consensus       240 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  318 (420)
                      .....|.+.+| .|.|..+.++.... .+...+ .++.|+++||++.|+..+   |+..+..+.+..++.. .+......
T Consensus         7 ~~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Gr---r~~~l~~~~~~~~~~~~~l~~~~~~   80 (356)
T TIGR00901         7 VGNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGR---RRSWLVLTQVLLLSLLLILSFLVPS   80 (356)
T ss_pred             HHhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCc---cHHHHHHHHHHHHHHHHHHHcCCcc
Confidence            34567777776 59999999988644 444444 889999999983211000   3333333333333332 22222221


Q ss_pred             CcH-HHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCc-------eeeee
Q 014698          319 LPH-WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHS-------WSMSL  390 (420)
Q Consensus       319 ~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~-------~~~~~  390 (420)
                      ... ......++.+.+.+...+.....+.+..|+|+|+.+.|+......+|..+++.+.+.+.+..+.       |+..|
T Consensus        81 ~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f  160 (356)
T TIGR00901        81 TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIF  160 (356)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHH
Confidence            222 2222233445555555555566677778999999999999999999999999999999887642       88888


Q ss_pred             hhhhHHHHHHHHHHhhhccC
Q 014698          391 FAPSIFFYLTGTIVWLAFAS  410 (420)
Q Consensus       391 ~~~~~~~~~~~~~~~~~~~~  410 (420)
                      ++.++..++.....++..++
T Consensus       161 ~i~ai~~l~~~~~~~~~~~e  180 (356)
T TIGR00901       161 FWTALLILPGLLVTLFLAKE  180 (356)
T ss_pred             HHHHHHHHHHHHHHHHhccC
Confidence            87776555544443333344

>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.08  E-value=6.4e-10  Score=96.51  Aligned_cols=152  Identities=16%  Similarity=0.143  Sum_probs=123.3

Q ss_pred             CCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHH
Q 014698          253 SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGL  332 (420)
Q Consensus       253 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  332 (420)
                      +-+..+.|+++....+..++.+++.|.+.||+|.         +..+..++........++.+..+ .+..+++=.+-|+
T Consensus       102 ~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy---------~ipm~~Gl~vmf~sTilFafg~s-y~~l~vAR~LQgv  171 (464)
T KOG3764|consen  102 DRENTQIGLLFASKALVQLLVNPFFGNLIDRIGY---------KIPMVAGLFVMFLSTILFAFGNS-YPMLFVARSLQGV  171 (464)
T ss_pred             cccccchhHHHHHHHHHHHHhcccchhhHHHhcc---------ccHHHHHHHHHHHHHHHHHHcch-hHHHHHHHHHhhh
Confidence            5566788999999999999999999999999995         45566666666666666655433 3444455578899


Q ss_pred             HhhhhhhhhhhhhhhccCcc-chHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698          333 ALSSFALSGLYCTHQDISPE-YASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASS  411 (420)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (420)
                      +..........+..+.+|.| +|++++|+.-.+..+|-.+||+.+|.++|.. ++..+|.+.++++++-..+.++..+.+
T Consensus       172 gsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~-Gk~aPFlVL~~v~Lld~~L~l~vi~p~  250 (464)
T KOG3764|consen  172 GSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA-GKSAPFLVLAIVLLLDGALQLLVIEPT  250 (464)
T ss_pred             hHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc-CCcCcHHHHHHHHHHHHHHHHheeCcc
Confidence            99888888888888988875 4899999999999999999999999999996 899999999998888888777766654


Q ss_pred             CCCC
Q 014698          412 KPQN  415 (420)
Q Consensus       412 ~~~~  415 (420)
                      +.++
T Consensus       251 ~~~~  254 (464)
T KOG3764|consen  251 EMDP  254 (464)
T ss_pred             ccCc
Confidence            4444

>TIGR00806 rfc RFC reduced folate carrier

Probab=99.08  E-value=7e-09  Score=93.87  Aligned_cols=155  Identities=10%  Similarity=0.031  Sum_probs=108.6

Q ss_pred             hhhhhhHhhhhhCCCcch-hhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCC
Q 014698          241 LSWLPTYFSEELSLNLTE-AAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGL  319 (420)
Q Consensus       241 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (420)
                      ..+...++.+.+|++..+ .|.+.+....+..+..+.+|++.||+|.|         ..+..+.+.-.+...+..+.. +
T Consensus        45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K---------~vL~l~~l~Wsl~t~L~~fa~-S  114 (511)
T TIGR00806        45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK---------PVLVLQALSFVCVWLLLLLGT-S  114 (511)
T ss_pred             HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch---------HHHHHHHHHHHHHHHHHHHHH-H
Confidence            344555677688999999 99999999999999999999999999964         333333333333333333322 2


Q ss_pred             cHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCcee---eeehhhhHH
Q 014698          320 PHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWS---MSLFAPSIF  396 (420)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~---~~~~~~~~~  396 (420)
                      ...+.+.-++.|++.+... .....+...+|+++|+++.|+.+....+|.++++.+.+.+. .. +|+   ...++....
T Consensus       115 l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~-gWr~y~~Ln~Isl~s  191 (511)
T TIGR00806       115 VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TL-GWISYSTLNIISLVF  191 (511)
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc-CchhHHHHHHHHHHH
Confidence            3344445588899988777 77777778899999999999999999999999999999954 33 333   233333333


Q ss_pred             HHHHHHHHhhhc
Q 014698          397 FYLTGTIVWLAF  408 (420)
Q Consensus       397 ~~~~~~~~~~~~  408 (420)
                      ..++.++.+++.
T Consensus       192 ~~~a~~~a~~LP  203 (511)
T TIGR00806       192 MTFSVFLALFLK  203 (511)
T ss_pred             HHHHHHHHHhCC
Confidence            444444444433

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=99.08  E-value=1.6e-09  Score=101.51  Aligned_cols=175  Identities=10%  Similarity=0.093  Sum_probs=109.6

Q ss_pred             hHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHH
Q 014698          233 GSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTL  312 (420)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (420)
                      ..........+++.|+.+.+|.++.++|.+.+...+...+..++.|.++||.++|.-+    ||..+..+....++...+
T Consensus        11 ~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Gr----rr~~i~~~~~~~~i~~~~   86 (437)
T TIGR00792        11 NNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGK----FRPWLLIGAIPFSIVLVL   86 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCC----cchhHHHhHHHHHHHHHH
Confidence            3445556667889999998999999999999999999999999999999996543111    344444443333333333


Q ss_pred             HhhcCCCc-----HHHHHHHHHHHHHhhhhhhhhhhhhhhcc-CccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC---
Q 014698          313 SSIDLGLP-----HWEIVGILTAGLALSSFALSGLYCTHQDI-SPEYASILLGITNTVGAVPGIVGVALTGYLLDST---  383 (420)
Q Consensus       313 ~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~---  383 (420)
                      ....++..     .+.....++.+.+.+....+......+.. ++++|++..+..+....+|+.+++.+.+.+....   
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~  166 (437)
T TIGR00792        87 LFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGG  166 (437)
T ss_pred             HHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            33222211     12222334455555544444444444544 5688999999999988898888877776666422   


Q ss_pred             ---CceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698          384 ---HSWSMSLFAPSIFFYLTGTIVWLAFASS  411 (420)
Q Consensus       384 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (420)
                         .+|+..+.+.+++..+...+.+...+|+
T Consensus       167 ~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~  197 (437)
T TIGR00792       167 DDKFGWFMFALVLALIGVVSLIICFFGTKER  197 (437)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHHcCCEec
Confidence               2455555555555444444444444443

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=99.07  E-value=6.5e-09  Score=96.18  Aligned_cols=182  Identities=14%  Similarity=0.086  Sum_probs=122.2

Q ss_pred             HHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhh----hhhcCcchHHHHHH
Q 014698          222 AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN----LIATGVETTMVRKI  297 (420)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~~~~~~~~~~~~~~  297 (420)
                      +........+...+++.....+.+.|+++ +|.++...+.+.....+..++.+++.|+++||    +|||        +.
T Consensus         5 ~li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRR--------rp   75 (477)
T TIGR01301         5 KLLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRR--------RP   75 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCCh--------HH
Confidence            34444555555567777777788888865 69999999999999999999999999999995    8874        34


Q ss_pred             HHHHHHHHhHHHHHHHhhcCC------------Cc----HHHHHHHHHHHHHhhhhhhhhhhhhhhccCccch--HHHHH
Q 014698          298 CQTIAFLSPAVCMTLSSIDLG------------LP----HWEIVGILTAGLALSSFALSGLYCTHQDISPEYA--SILLG  359 (420)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~------------~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--g~~~g  359 (420)
                      .+..+.......+.+.....+            ..    ....+.+.+..++......+....+.+..|+++|  +.+.+
T Consensus        76 ~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~  155 (477)
T TIGR01301        76 FIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANA  155 (477)
T ss_pred             HHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHH
Confidence            444334434344333332211            00    1122223334455665666777777787887654  68999


Q ss_pred             HHHHhhhhhHHHHHHHHHHH--hccC------------CceeeeehhhhHHHHHHHHHHhhhccCCC
Q 014698          360 ITNTVGAVPGIVGVALTGYL--LDST------------HSWSMSLFAPSIFFYLTGTIVWLAFASSK  412 (420)
Q Consensus       360 ~~~~~~~~g~~~~~~~~g~l--~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (420)
                      +.+.+.++|+.+++.+++..  .+..            .+++..|++.+++.+++..+..+..+|..
T Consensus       156 ~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~  222 (477)
T TIGR01301       156 YFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP  222 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence            99999999999999998865  2211            14566777777777777766666666543

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=99.05  E-value=1.6e-09  Score=83.95  Aligned_cols=134  Identities=12%  Similarity=0.167  Sum_probs=92.3

Q ss_pred             HhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhh
Q 014698          264 ILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLY  343 (420)
Q Consensus       264 ~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  343 (420)
                      +...++..++.++.+++.||+++|        +.. ..+.............. ++........++.|.+.+...+....
T Consensus         5 ~~~~~~~~~~~~~~g~~~d~~g~~--------~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~   74 (141)
T TIGR00880         5 AGYALGQLIYSPLSGLLTDRFGRK--------PVL-LVGLFIFVLSTAMFALS-SNITVLIIARFLQGFGAAFALVAGAA   74 (141)
T ss_pred             EeehhHHHHHHhhHHHHHhhcchh--------HHH-HHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhHHH
Confidence            455677888999999999999864        222 23322222332222222 22444445557777777766666666


Q ss_pred             hhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhc
Q 014698          344 CTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAF  408 (420)
Q Consensus       344 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (420)
                      ...+..|+++|+++.++.+....++..++|.+.+.+.+.. +++..+.+.+....+.....+...
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  138 (141)
T TIGR00880        75 LIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL-GWRAPFLFLAILALAAFILLAFLL  138 (141)
T ss_pred             HHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc-chHHHHHHHHHHHHHHHHHHhhcC
Confidence            7777789999999999999999999999999999999875 677677776655555554444433

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=99.02  E-value=4.5e-09  Score=94.62  Aligned_cols=185  Identities=13%  Similarity=0.107  Sum_probs=140.2

Q ss_pred             hhhhc-HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhC----CCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcc
Q 014698          216 AIFRS-KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELS----LNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVE  290 (420)
Q Consensus       216 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~  290 (420)
                      ..+++ |.++.+...-+.--+++|+....+..|+..+.+    +|..++.-+++.++...-+..+++|+++||+-.+   
T Consensus        15 ~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~---   91 (498)
T COG3104          15 KFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGT---   91 (498)
T ss_pred             ccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcch---
Confidence            34444 567777888889999999999999999998888    9998888787877777778888999999998432   


Q ss_pred             hHHHHHHHHHHHHHHhHHHHHHHhhcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccc--hHHHHHHHHHhhhh
Q 014698          291 TTMVRKICQTIAFLSPAVCMTLSSIDL-GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEY--ASILLGITNTVGAV  367 (420)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~~  367 (420)
                          |+. +..+.++..++..+..... .......+.+.+++++.|.+=+.......+.+|+++  |-.++++.....++
T Consensus        92 ----~~t-I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNi  166 (498)
T COG3104          92 ----RRT-IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINI  166 (498)
T ss_pred             ----hHH-HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeeh
Confidence                333 3444444455544444442 335567777888889999888888888888777533  77788888999999


Q ss_pred             hHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698          368 PGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFA  409 (420)
Q Consensus       368 g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (420)
                      |+.++|.+.+++.++. +|+..|...++-+..+.+..+...+
T Consensus       167 Gsl~~p~i~~~~~~~~-g~~~gF~~aavGm~~gl~~f~~~~r  207 (498)
T COG3104         167 GSLIAPIITGLLAINY-GWHVGFGLAAVGMIIGLVIFLLGRR  207 (498)
T ss_pred             HHHHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHHccc
Confidence            9999999999999996 7888888887766666555554443

>TIGR00896 CynX cyanate transporter

Probab=99.01  E-value=5.2e-09  Score=95.12  Aligned_cols=143  Identities=16%  Similarity=0.180  Sum_probs=98.0

Q ss_pred             HhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCC
Q 014698          240 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGL  319 (420)
Q Consensus       240 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (420)
                      ....+|.+.+ ++|.+..+.++..+...++..++.++.|++.||+|+|       +. + ..+........... .. ++
T Consensus        19 ~~~~lp~l~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-------~~-~-~~~~~~~~~~~~~~-~~-~~   86 (355)
T TIGR00896        19 VGPLLPQIRS-ALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEE-------RS-V-AAGLLLIAAGILIR-SA-PG   86 (355)
T ss_pred             CcccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCch-------HH-H-HHHHHHHHHHHHHH-Hh-cc
Confidence            3456666665 4799999999999999999999999999999999975       22 2 22322222222222 22 22


Q ss_pred             cHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCc-eeeeehhhhH
Q 014698          320 PHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHS-WSMSLFAPSI  395 (420)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~-~~~~~~~~~~  395 (420)
                      .....+..++.|++.+...........+.. +++|+++.+..+....+|..+++.+.+.+.+..+. |+..|...++
T Consensus        87 ~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~  162 (355)
T TIGR00896        87 TALLFAGTALIGVGIAIINVLLPSLIKRDF-PQRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWAL  162 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHhccchHHHHHhC-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence            344444446667766654444444444444 57899999999999999999999999998876533 6666655444

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=99.00  E-value=5.9e-09  Score=98.88  Aligned_cols=148  Identities=8%  Similarity=-0.002  Sum_probs=100.4

Q ss_pred             CCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhc---------CCCc--H
Q 014698          253 SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID---------LGLP--H  321 (420)
Q Consensus       253 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~--~  321 (420)
                      +.+..+.++..+...++..+++++.|+++||+|||        +.+ ..+.....++.......         .+..  .
T Consensus        51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr--------~~~-~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~  121 (479)
T PRK10077         51 SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRR--------DSL-KIAAVLFFISALGSAWPEFGFTSIGPDNTGYVP  121 (479)
T ss_pred             cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH--------HHH-HHHHHHHHHHHHHHHhhccccccccccchhHHH
Confidence            78888999999999999999999999999999974        222 22222222222221110         1111  1


Q ss_pred             HHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc-------CCceeeeehhhh
Q 014698          322 WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS-------THSWSMSLFAPS  394 (420)
Q Consensus       322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-------~~~~~~~~~~~~  394 (420)
                      ...+.-++.|++.+...+.....+.+..|+++|+++.++.+....+|..+++.+.+.+...       ..+|+..|++.+
T Consensus       122 ~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~  201 (479)
T PRK10077        122 EFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEA  201 (479)
T ss_pred             HHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHH
Confidence            2233347778888888888888888889999999999999999899999888766655321       126787887766


Q ss_pred             HHHHHHHHHHhhhccC
Q 014698          395 IFFYLTGTIVWLAFAS  410 (420)
Q Consensus       395 ~~~~~~~~~~~~~~~~  410 (420)
                      +..++..+. .+..++
T Consensus       202 ~~~~~~~~~-~~~l~~  216 (479)
T PRK10077        202 IPALLFLML-LYFVPE  216 (479)
T ss_pred             HHHHHHHHH-HHcCCC
Confidence            555554433 333444

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=98.99  E-value=3.2e-08  Score=86.61  Aligned_cols=161  Identities=14%  Similarity=0.039  Sum_probs=120.3

Q ss_pred             HHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh
Q 014698          235 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS  314 (420)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (420)
                      ......+..+-..+++.++.+..+++++......+..+.++..+++.+|+|.|         .-+..++.+.++...++.
T Consensus        26 G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk---------~gi~lgL~l~avg~~lF~   96 (422)
T COG0738          26 GFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYK---------AGIVLGLLLYAVGAALFW   96 (422)
T ss_pred             HHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhH---------HHHHHHHHHHHHHHHHHh
Confidence            33444455666777888999999999999999999999999999999999954         445555555555555544


Q ss_pred             hc--CCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc----------
Q 014698          315 ID--LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS----------  382 (420)
Q Consensus       315 ~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~----------  382 (420)
                      ..  ..+.......+++.+.+.+......+..+...-+++..+.-+.+.+.+..+|++++|.+++.+.++          
T Consensus        97 pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~  176 (422)
T COG0738          97 PAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQ  176 (422)
T ss_pred             hhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHH
Confidence            22  223344556668889999988888888888878888888889999999999999999999999884          


Q ss_pred             --------CCceeeeehhhhHHHHHHHHHH
Q 014698          383 --------THSWSMSLFAPSIFFYLTGTIV  404 (420)
Q Consensus       383 --------~~~~~~~~~~~~~~~~~~~~~~  404 (420)
                              ...++.++...+....+..+..
T Consensus       177 ~~~~~~~~~~~v~~pYl~~~~~lvll~v~~  206 (422)
T COG0738         177 ILAIKGADASSVQFPYLILAGLLVLLAVLI  206 (422)
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence                    1245666666655444444433

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=98.99  E-value=1.6e-08  Score=93.21  Aligned_cols=177  Identities=14%  Similarity=0.024  Sum_probs=110.1

Q ss_pred             HHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHH--HhhHHHHHHHHHhh-hhhhhhhhhcCcchHHHHHHHHH
Q 014698          224 WAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVS--ILPPLASVLVTSIA-AQFADNLIATGVETTMVRKICQT  300 (420)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~-g~l~dr~~~~~~~~~~~~~~~~~  300 (420)
                      ......++.+...+......+|.++++. |.|..+.|++.  ........+..++. ++..||.|+|       |.+.+.
T Consensus         4 ~~~~~ly~~~g~~~~~~~p~lp~~l~~~-g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r-------~~~i~~   75 (390)
T TIGR02718         4 ITLGLLYLSQGIPIGLAMDALPTLLRED-GAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRR-------RSWVLP   75 (390)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcc-------hhHHHH
Confidence            4455566777777777888999999986 99999999973  55677777777776 4468888876       443333


Q ss_pred             HHHHHhHHHHHHHhhcCC-C-cHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHH
Q 014698          301 IAFLSPAVCMTLSSIDLG-L-PHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGY  378 (420)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~  378 (420)
                      ...........+...... . ..+.........+......+.......++.++++++...+.......+|..+++...++
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~  155 (390)
T TIGR02718        76 MQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLV  155 (390)
T ss_pred             HHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            322222112112111111 1 22222222333333333333333345566677777888888777778889999988889


Q ss_pred             HhccCCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698          379 LLDSTHSWSMSLFAPSIFFYLTGTIVWLAFA  409 (420)
Q Consensus       379 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (420)
                      +.++. +++..|++.++..++..+..+...+
T Consensus       156 l~~~~-gw~~~f~~~a~l~~~~~~~~~~~~~  185 (390)
T TIGR02718       156 LFGKF-GQRPAFLLVACVPLASLVCVLWLKD  185 (390)
T ss_pred             HHHHh-CHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            99886 7888888887766655555444433

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=98.98  E-value=2.8e-09  Score=92.04  Aligned_cols=125  Identities=14%  Similarity=0.123  Sum_probs=96.2

Q ss_pred             CCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHH-HHHHHH
Q 014698          254 LNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVG-ILTAGL  332 (420)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~  332 (420)
                      .+...+|++-+.+.+...+.++.+|.++||+|         ||..+..+.+..++...++....+ . ..++. =++.|+
T Consensus        65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yG---------Rkpvll~c~~~va~s~ll~~~S~~-F-~afv~aR~l~Gi  133 (451)
T KOG2615|consen   65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYG---------RKPVLLACLIGVALSYLLWALSRN-F-AAFVLARFLGGI  133 (451)
T ss_pred             ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhC---------chHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHhhhh
Confidence            35567899999999999999999999999999         557777777777777776665432 2 23333 366677


Q ss_pred             HhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc---cCCceeeee
Q 014698          333 ALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD---STHSWSMSL  390 (420)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~---~~~~~~~~~  390 (420)
                      +-+ ......+.+.+..++|+|+.+++..++..++|-++||.++|++..   ..|.+..++
T Consensus       134 ~kg-nl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~al  193 (451)
T KOG2615|consen  134 FKG-NLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFAL  193 (451)
T ss_pred             ccC-chHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHH
Confidence            766 445566667777889999999999999999999999999999987   445554333

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=98.98  E-value=3.5e-08  Score=92.89  Aligned_cols=178  Identities=13%  Similarity=0.137  Sum_probs=114.3

Q ss_pred             hhhcHHHHHHHHHHHHhHHHHHHH----hhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchH
Q 014698          217 IFRSKAVWAMIYAHFCGSWGHYTC----LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT  292 (420)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~  292 (420)
                      .+++++++.......+.....+..    ...++...+ ..|-+ .+..++.....++..++.++.|+++|.+||      
T Consensus        36 ~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~-diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGR------  107 (599)
T PF06609_consen   36 YYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINA-DIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGR------  107 (599)
T ss_pred             ceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH-hcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcc------
Confidence            345676666554444333322222    233444344 45655 556677788889999999999999999994      


Q ss_pred             HHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHH
Q 014698          293 MVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVG  372 (420)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~  372 (420)
                         +.....+.++..++..+..... +....+....+.|++.+.. ......+.|..|.+.|..+.++.....-.....+
T Consensus       108 ---r~~~i~g~~l~vvG~Iv~atA~-~~~~~iag~~l~GvgaG~~-~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~  182 (599)
T PF06609_consen  108 ---RYFFIIGSLLGVVGSIVCATAQ-NMNTFIAGMVLYGVGAGVQ-ELAALAISELVPNKWRGLGLAIASIPFIITTWIS  182 (599)
T ss_pred             ---hHHHHHHHHHHHhHHHHhhcCC-cHHHHHHHHHHHHHhhHHH-HHHHHHHHHhcccchhhhHhHHHHHHHHhhhccc
Confidence               4666666666666655554433 3455666777778876643 3444456777888999888877665544555567


Q ss_pred             HHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhc
Q 014698          373 VALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAF  408 (420)
Q Consensus       373 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (420)
                      |.+...+..+ ++|++.|++..+...++.+..++++
T Consensus       183 ~~ia~~~~~~-~~WRw~~~~~~i~~~i~~vl~~~fY  217 (599)
T PF06609_consen  183 PLIAQLFAAH-SGWRWIFYIFIIWSGIALVLIFFFY  217 (599)
T ss_pred             HHHHHHhccC-CCcchHHHHHHHHHHHHHHHHHHHh
Confidence            7776666555 5899999998877666655544433

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=98.96  E-value=5e-08  Score=91.12  Aligned_cols=159  Identities=10%  Similarity=0.010  Sum_probs=96.6

Q ss_pred             HHHhHHHHHHHhhhhhhHhhhhhC---CCcchh---hHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHH
Q 014698          230 HFCGSWGHYTCLSWLPTYFSEELS---LNLTEA---AWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAF  303 (420)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~  303 (420)
                      .++...-...+....| ++.++++   .+..+.   +...+...++..+++++.|+++||+|||         ..+..+.
T Consensus        31 ~~~~~~d~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr---------~~l~~~~  100 (432)
T PRK10406         31 NLVEWFDFYVYSFCSL-YFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRK---------KSMLISV  100 (432)
T ss_pred             HHHHHHHHHHHHHHHH-HHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcH---------HHHHHHH
Confidence            4443444444333444 5555553   344432   3334445556669999999999999964         3333444


Q ss_pred             HHhHHHHHHHhhcCCCc-------HHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHH
Q 014698          304 LSPAVCMTLSSIDLGLP-------HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALT  376 (420)
Q Consensus       304 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~  376 (420)
                      ....+........++..       ....+.-++.|++.+...+.....+.|..|+++|+++.++.+.....|..+++.+.
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~  180 (432)
T PRK10406        101 CMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVV  180 (432)
T ss_pred             HHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence            44444333333322211       12333446788888877888888888888999999999998877777777777665


Q ss_pred             HHHhcc-------CCceeeeehhhhHHHH
Q 014698          377 GYLLDS-------THSWSMSLFAPSIFFY  398 (420)
Q Consensus       377 g~l~~~-------~~~~~~~~~~~~~~~~  398 (420)
                      ..+...       ..+|+..|.+.++..+
T Consensus       181 ~~~~~~~~~~~~~~~gWr~~F~i~~~~~l  209 (432)
T PRK10406        181 VVLQQTLEDAELREWGWRIPFALGAVLAV  209 (432)
T ss_pred             HHHHHhCCHHHHhccchHHHHHHHHHHHH
Confidence            544321       2378888877555443

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=98.96  E-value=3.2e-08  Score=94.22  Aligned_cols=118  Identities=10%  Similarity=0.014  Sum_probs=86.2

Q ss_pred             CCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCC-----cHHHHHHHH
Q 014698          254 LNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGL-----PHWEIVGIL  328 (420)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  328 (420)
                      .+..+.+++.+...++.+++.++.|++.||+|||         ..+..+.+...+...+.....+.     .....+.-+
T Consensus        53 ~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr---------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~  123 (502)
T TIGR00887        53 LPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRK---------RVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRF  123 (502)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccH---------HHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHH
Confidence            4455678888999999999999999999999964         33333333333332222222211     133445557


Q ss_pred             HHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHh
Q 014698          329 TAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL  380 (420)
Q Consensus       329 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~  380 (420)
                      +.|++.+...+.......+..|+++|+++.++.+....+|..+++.+...+.
T Consensus       124 l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~  175 (502)
T TIGR00887       124 WLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVL  175 (502)
T ss_pred             HHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8889888888888888888899999999999999999999999998877654

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>PTZ00207 hypothetical protein; Provisional

Probab=98.95  E-value=5.7e-08  Score=92.04  Aligned_cols=162  Identities=11%  Similarity=0.009  Sum_probs=101.1

Q ss_pred             HHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh
Q 014698          235 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS  314 (420)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (420)
                      ...+.+..+.|. +++.+|+|..+.+.+.+.. .......++.|++.||+|+|         ..+..+.+...++..+..
T Consensus        41 g~~y~fsv~s~~-L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R---------~vllig~ll~~iG~ll~a  109 (591)
T PTZ00207         41 SFMYAFNLISGA-MQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPR---------PIFVLSMTVFCLGTLLFA  109 (591)
T ss_pred             HHHHHHHHHHHH-HHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcH---------HHHHHHHHHHHHHHHHHH
Confidence            334455555565 4666899999999887653 33345666789999999963         444444444444444433


Q ss_pred             hcC-----CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeee
Q 014698          315 IDL-----GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMS  389 (420)
Q Consensus       315 ~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~  389 (420)
                      ...     .+.+...+...+.|.+.+...........+.+ |++||++.|+......+|+++.+.+...+.+.  ++...
T Consensus       110 la~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~F-p~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~--~~~~~  186 (591)
T PTZ00207        110 LTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVF-PSNRGAVVAIMKTFTGLGSAILGSIQLAFFSD--NTSAY  186 (591)
T ss_pred             HHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hHHHH
Confidence            321     22333444456667776655555555555555 58899999999999999998655555555432  45556


Q ss_pred             ehhhhHHHHHHHHHHhhhccC
Q 014698          390 LFAPSIFFYLTGTIVWLAFAS  410 (420)
Q Consensus       390 ~~~~~~~~~~~~~~~~~~~~~  410 (420)
                      +++.++...+..++.+.+.+.
T Consensus       187 fl~l~vl~~vv~ll~~~~vr~  207 (591)
T PTZ00207        187 FFFLMSFALVVGILAIVFMRL  207 (591)
T ss_pred             HHHHHHHHHHHHHHHHhheeC
Confidence            666666666655555554443

>TIGR00805 oat sodium-independent organic anion transporter

Probab=98.93  E-value=4.4e-09  Score=101.98  Aligned_cols=140  Identities=12%  Similarity=0.103  Sum_probs=99.6

Q ss_pred             HHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHH
Q 014698          234 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS  313 (420)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (420)
                      .....++....-.-++++++++..+.|++.+...++..++.++.+++.||.+|++        + +..+.++.++..++.
T Consensus        45 ~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~--------~-i~~g~ll~~lg~ll~  115 (633)
T TIGR00805        45 GLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPI--------V-IGIGCAIMGLGSFLL  115 (633)
T ss_pred             HHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcce--------E-EEecHHHHHHHHHHH
Confidence            3333344443334456678999999999999999999999999999999999652        2 222222222222222


Q ss_pred             hhcC-------------------------------------------------C-CcHHHHHHHHHHHHHhhhhhhhhhh
Q 014698          314 SIDL-------------------------------------------------G-LPHWEIVGILTAGLALSSFALSGLY  343 (420)
Q Consensus       314 ~~~~-------------------------------------------------~-~~~~~~~~~~~~g~~~~~~~~~~~~  343 (420)
                      ..+.                                                 . ....+++.-++.|++.+...+....
T Consensus       116 alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~  195 (633)
T TIGR00805       116 SLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGIS  195 (633)
T ss_pred             hChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCch
Confidence            2110                                                 0 0122334557888888877777777


Q ss_pred             hhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc
Q 014698          344 CTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS  382 (420)
Q Consensus       344 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~  382 (420)
                      .+.+.+|+++|+...|+.+....+|..+|+.+++.+.+.
T Consensus       196 ~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~  234 (633)
T TIGR00805       196 YIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQI  234 (633)
T ss_pred             hhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhc
Confidence            787888999999999999999999999999999998864

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PRK09669 putative symporter YagG; Provisional

Probab=98.88  E-value=2.8e-08  Score=93.12  Aligned_cols=153  Identities=8%  Similarity=0.041  Sum_probs=96.6

Q ss_pred             HHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHH
Q 014698          226 MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLS  305 (420)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~  305 (420)
                      ..+..+..+........+++.|+.+.+|+++.++|.+..+.-+...+..++.|.++||.+.|.-+    |+..+..+...
T Consensus        14 yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Gr----rrp~il~~~~~   89 (444)
T PRK09669         14 YGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQ----FRPYLLWFAIP   89 (444)
T ss_pred             hcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCC----cchhHHHHHHH
Confidence            33444444555566677899999999999999999999999999999999999999995432111    23333333333


Q ss_pred             hHHHHHHHhhcCCC-----cHHHHHHHHHHHHHhhhhhhhhhhhhhhcc-CccchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698          306 PAVCMTLSSIDLGL-----PHWEIVGILTAGLALSSFALSGLYCTHQDI-SPEYASILLGITNTVGAVPGIVGVALTGYL  379 (420)
Q Consensus       306 ~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l  379 (420)
                      .++...+....++.     ..+..+...+.+.+......+......+.. ++++|++..+.......+|+.+++.+...+
T Consensus        90 ~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl  169 (444)
T PRK09669         90 FGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPL  169 (444)
T ss_pred             HHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            22222222222221     122233334445555545544444444443 458899999998888889888888766655


Q ss_pred             hcc
Q 014698          380 LDS  382 (420)
Q Consensus       380 ~~~  382 (420)
                      ...
T Consensus       170 ~~~  172 (444)
T PRK09669        170 VDI  172 (444)
T ss_pred             HHH
Confidence            543

>PRK09952 shikimate transporter; Provisional

Probab=98.87  E-value=1.2e-07  Score=88.54  Aligned_cols=163  Identities=8%  Similarity=0.016  Sum_probs=100.0

Q ss_pred             HHHHHHHHHhHHHHHHHhhhhhhHhhhhh--CCCcchhhHHH-----HhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHH
Q 014698          224 WAMIYAHFCGSWGHYTCLSWLPTYFSEEL--SLNLTEAAWVS-----ILPPLASVLVTSIAAQFADNLIATGVETTMVRK  296 (420)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~-----~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~  296 (420)
                      ....+..++...-........|.+..+.+  +.++. .+...     ....++..+++++.|++.||+|||         
T Consensus        25 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr---------   94 (438)
T PRK09952         25 LGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRK---------   94 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccH---------
Confidence            33344444444444444445555555443  55655 34432     233345668888899999999964         


Q ss_pred             HHHHHHHHHhHHHHHHHhhcCCCcH-------HHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhH
Q 014698          297 ICQTIAFLSPAVCMTLSSIDLGLPH-------WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPG  369 (420)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~  369 (420)
                      ..+..+.....+...+....++...       .....-++.|++.+...+.......|..|+++|+...+..+....+|.
T Consensus        95 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~  174 (438)
T PRK09952         95 RMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGL  174 (438)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence            3334444444444444444333211       123333677888887777777777788899999999999988888888


Q ss_pred             HHHHHHHHHHhcc-------CCceeeeehhhhHH
Q 014698          370 IVGVALTGYLLDS-------THSWSMSLFAPSIF  396 (420)
Q Consensus       370 ~~~~~~~g~l~~~-------~~~~~~~~~~~~~~  396 (420)
                      .+++.+...+...       ..+|+..|.+.++.
T Consensus       175 ~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~  208 (438)
T PRK09952        175 LLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVL  208 (438)
T ss_pred             HHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHH
Confidence            8888777665532       13788788776544

>TIGR00898 2A0119 cation transport protein

Probab=98.84  E-value=2.4e-08  Score=95.33  Aligned_cols=129  Identities=18%  Similarity=0.001  Sum_probs=103.0

Q ss_pred             hHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchH--HHHHHHHHHHHhccccchhhhHHHHHhcCCccccchh
Q 014698           48 NLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFM--PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA  125 (420)
Q Consensus        48 ~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~  125 (420)
                      ..+.++.+.+.||.+||+.+..+.++.+++.++..+ .++.  +...+.-++.+++.+..++....+.+|.+|++.|+++
T Consensus       369 i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~  447 (505)
T TIGR00898       369 LPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLF-VPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLG  447 (505)
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhh
Confidence            345677777899999999999999888888777665 4432  4455566677777777788889999999999999999


Q ss_pred             hHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcc
Q 014698          126 VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGET  179 (420)
Q Consensus       126 ~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~  179 (420)
                      +|+.+....+|.+++|.+.+ +. ..++..++.+.+...++..+...++||++.
T Consensus       448 ~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~lpet~~  499 (505)
T TIGR00898       448 VGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFGGLALLAGILTLFLPETKG  499 (505)
T ss_pred             HhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHHHHHHHHHHHHHcCcCCCC
Confidence            99999999999999999988 43 446778888888887777777778887653

>PRK10429 melibiose:sodium symporter; Provisional

Probab=98.82  E-value=8.2e-08  Score=90.68  Aligned_cols=149  Identities=11%  Similarity=0.091  Sum_probs=98.2

Q ss_pred             HHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhh----hhcCcchHHHHHHHHH
Q 014698          225 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL----IATGVETTMVRKICQT  300 (420)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----~~~~~~~~~~~~~~~~  300 (420)
                      ...+..+..+........+++.|+.+..|+++..+|.+....-+...+..++.|.++||.    |||       |.++ .
T Consensus        10 ~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grr-------rp~i-l   81 (473)
T PRK10429         10 SYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKF-------KPWI-L   81 (473)
T ss_pred             hhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCc-------chhH-h
Confidence            344444555666677778999999999999999999999999999999999999999954    664       3333 3


Q ss_pred             HHHHHhHHHHHHHhhcCCCc-----HHHHHHHHHHHHHhhhhhhhhhhhhhhcc-CccchHHHHHHHHHhhhhhHHHHHH
Q 014698          301 IAFLSPAVCMTLSSIDLGLP-----HWEIVGILTAGLALSSFALSGLYCTHQDI-SPEYASILLGITNTVGAVPGIVGVA  374 (420)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~  374 (420)
                      .+....++...+....++.+     .+..+..++...++.....+..+...+.. ++++|.+..+......++|+.+.+.
T Consensus        82 ~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~  161 (473)
T PRK10429         82 IGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAG  161 (473)
T ss_pred             hhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34344333333333322211     12222334445566555555555555555 5788999999877878888777766


Q ss_pred             HHHHHhc
Q 014698          375 LTGYLLD  381 (420)
Q Consensus       375 ~~g~l~~  381 (420)
                      +...+.+
T Consensus       162 ~~~~~~~  168 (473)
T PRK10429        162 FTLPFVN  168 (473)
T ss_pred             HHHHHHH
Confidence            6555443

>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=98.81  E-value=6.5e-08  Score=89.58  Aligned_cols=151  Identities=16%  Similarity=0.123  Sum_probs=116.2

Q ss_pred             hhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCc-HHHHHHHH
Q 014698          250 EELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLP-HWEIVGIL  328 (420)
Q Consensus       250 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  328 (420)
                      +.+.++..+-+++.+....+.+++.+..|++.||+|.|        +. ...+.+..++..++.....+.. +..++.=+
T Consensus        66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r--------~v-~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~  136 (466)
T KOG2532|consen   66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGAR--------RV-FFISGLISALLTLLTPLAASIGFYLLLVLRF  136 (466)
T ss_pred             ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCch--------HH-HHHHHHHHHHHHHHHHHHHHhcchhhHHHHH
Confidence            35788899999999999999999999999999999964        33 3334344344433333332222 33344448


Q ss_pred             HHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhc
Q 014698          329 TAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAF  408 (420)
Q Consensus       329 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (420)
                      +.|++.+...+.......+-.|+++|++..++.....++|.+++-++.|.+-+...||...|++.+++.++..++.+.+.
T Consensus       137 lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~  216 (466)
T KOG2532|consen  137 LQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFY  216 (466)
T ss_pred             HhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHh
Confidence            88999998888888888888999999999999999999999999999999999855899999999887776665544443


Q ss_pred             c
Q 014698          409 A  409 (420)
Q Consensus       409 ~  409 (420)
                      .
T Consensus       217 ~  217 (466)
T KOG2532|consen  217 S  217 (466)
T ss_pred             c
Confidence            3

>PRK11462 putative transporter; Provisional

Probab=98.80  E-value=2e-07  Score=87.54  Aligned_cols=156  Identities=7%  Similarity=-0.007  Sum_probs=102.5

Q ss_pred             HHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHH
Q 014698          225 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL  304 (420)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~  304 (420)
                      ...+..+..+........|+..|+.+..|+++..+|.+..+.-+...+.-++.|.++||...|.-+    |+..+..+..
T Consensus        13 ~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr----~rp~il~g~i   88 (460)
T PRK11462         13 GYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGK----FRPWVLFGAL   88 (460)
T ss_pred             hhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCC----cchhHhHHHH
Confidence            333444444556666677899999999999999999999999999999999999999986433111    3333333433


Q ss_pred             HhHHHHHHHhhcCCCc-----HHHHHHHHHHHHHhhhhhhhhhhhhhhcc-CccchHHHHHHHHHhhhhhHHHHHHHHHH
Q 014698          305 SPAVCMTLSSIDLGLP-----HWEIVGILTAGLALSSFALSGLYCTHQDI-SPEYASILLGITNTVGAVPGIVGVALTGY  378 (420)
Q Consensus       305 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~~~g~  378 (420)
                      ..++...+.+..++..     .+..+...++..++.....+..+...+.. ++++|++..+.......+|..+++.+...
T Consensus        89 ~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~p  168 (460)
T PRK11462         89 PFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMP  168 (460)
T ss_pred             HHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3333333333222211     22333334456666655555555555544 36889999999999999998888887766


Q ss_pred             HhccCC
Q 014698          379 LLDSTH  384 (420)
Q Consensus       379 l~~~~~  384 (420)
                      +.+..|
T Consensus       169 lv~~~g  174 (460)
T PRK11462        169 LVNLIG  174 (460)
T ss_pred             HHHHhC
Confidence            665443

>PRK15075 citrate-proton symporter; Provisional

Probab=98.79  E-value=2.6e-07  Score=86.38  Aligned_cols=160  Identities=11%  Similarity=0.043  Sum_probs=100.9

Q ss_pred             HHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHH-HHhh-----HHHHHHHHHhhhhhhhhhhhcCcchHHHHH
Q 014698          223 VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWV-SILP-----PLASVLVTSIAAQFADNLIATGVETTMVRK  296 (420)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~-----~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~  296 (420)
                      .....+..++...-...+....|...++ ++.++.+.+.. .+..     .+...+++++.|++.||+|||         
T Consensus        17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr---------   86 (434)
T PRK15075         17 ILRVTSGNFLEMFDFFLFGFYATAIAKT-FFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRR---------   86 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchH---------
Confidence            4445556666666666677777766554 68776664433 2221     222346788999999999964         


Q ss_pred             HHHHHHHHHhHHHHHHHhhcCCCcH-------HHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhH
Q 014698          297 ICQTIAFLSPAVCMTLSSIDLGLPH-------WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPG  369 (420)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~  369 (420)
                      ..+..+.....+...+....++...       ...+.-++.|++.+...+.......+.+|+++|+++.++.+...++|.
T Consensus        87 ~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~  166 (434)
T PRK15075         87 KGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAV  166 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHH
Confidence            3333343444443333333332111       123344667777776666666667788999999999999999888888


Q ss_pred             HHHHHHHHHHh--------ccCCceeeeehhh
Q 014698          370 IVGVALTGYLL--------DSTHSWSMSLFAP  393 (420)
Q Consensus       370 ~~~~~~~g~l~--------~~~~~~~~~~~~~  393 (420)
                      .+++.+++.+.        +.. +|+..|++.
T Consensus       167 ~~g~~~g~~l~~~~~~~~~~~~-gWr~~f~~~  197 (434)
T PRK15075        167 VFAALLGYLLNQWLSPAQMAEW-GWRIPFLIG  197 (434)
T ss_pred             HHHHHHHHHHHHhCCHHHHhcc-chHHHHHHH
Confidence            88887777653        333 677777663

>TIGR00788 fbt folate/biopterin transporter

Probab=98.78  E-value=1.8e-07  Score=87.96  Aligned_cols=183  Identities=17%  Similarity=0.087  Sum_probs=114.1

Q ss_pred             cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698          220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ  299 (420)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~  299 (420)
                      ++........++..... +.....++.++++.+|.|+.+.+.+.+...+...+-.+ .|.++||++..+.+    |+..+
T Consensus        25 ~~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~r----Rr~~l   98 (468)
T TIGR00788        25 RVVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYT----KRWYL   98 (468)
T ss_pred             chHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCcc----chHHH
Confidence            34444555567777776 66677888888888899999998888888888877544 99999999621111    44444


Q ss_pred             HHHHHHh-HHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHH---HHHHHHHhhhhhHHHHHHH
Q 014698          300 TIAFLSP-AVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASI---LLGITNTVGAVPGIVGVAL  375 (420)
Q Consensus       300 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~---~~g~~~~~~~~g~~~~~~~  375 (420)
                      ....+.. ...+.......+........+++.+++.+......-..+.+..+ |+++.   ..+.......+|..+++.+
T Consensus        99 ~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l  177 (468)
T TIGR00788        99 VLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLL  177 (468)
T ss_pred             HHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHH
Confidence            4444333 23222222222222222334455666666555666666666665 44333   3334444456899999999


Q ss_pred             HHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698          376 TGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASS  411 (420)
Q Consensus       376 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (420)
                      .|.+.+.. +++..|++.+...++. .+.....+|+
T Consensus       178 ~G~l~~~~-~~~~~f~~~a~l~ll~-~~~~~~~~E~  211 (468)
T TIGR00788       178 GGPLLDKT-LTRILFLITAALLLLQ-LFVSNLSKER  211 (468)
T ss_pred             HHHHHHhc-CcchHHHHHHHHHHHH-HHHHHhcccc
Confidence            99999886 7888888877665555 3334444544

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=98.77  E-value=1.1e-07  Score=88.58  Aligned_cols=135  Identities=17%  Similarity=0.035  Sum_probs=112.5

Q ss_pred             hhHHhHHhhhhcchhhhcchh--HHHHHHHHHHHHHHHHHHHh--------hchHHHHHHHHHHHHhccccchhhhHHHH
Q 014698           44 LKDTNLLELLRLPLLFVTWIR--KVLQTGVLIWSLATALLPLL--------AGFMPGLVLSRVLVGIGEGVSPSAATDLI  113 (420)
Q Consensus        44 ~~~~~~~~l~~~p~~~~~~~r--~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i  113 (420)
                      ......|+++.+.+.||.+.|  +++..+++.+.+..+... +        .++.+.+.+.-++.|+..|..++...++.
T Consensus       327 ~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~-~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~  405 (477)
T PF11700_consen  327 QIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGL-FGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLF  405 (477)
T ss_pred             HHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHH-HHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence            334445688888889999977  888888888765554432 3        46678899999999999999999999999


Q ss_pred             HhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccc-hhHHHHHHHHHHHHHHHHhhhcccCcc
Q 014698          114 ARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYIFGLLGIAWFSGFKILQEGET  179 (420)
Q Consensus       114 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~~~~~~  179 (420)
                      +|..|+++.+..+|++....-....+||++.+.+.+..| -|..+....++.++.+++.++++.++.
T Consensus       406 ~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~~g  472 (477)
T PF11700_consen  406 SRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDVEKG  472 (477)
T ss_pred             HHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccchhh
Confidence            999999999999999999999999999999999998776 889988888888777777677666543

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=98.76  E-value=4.4e-07  Score=82.94  Aligned_cols=139  Identities=17%  Similarity=0.158  Sum_probs=88.1

Q ss_pred             HHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHH
Q 014698          225 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL  304 (420)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~  304 (420)
                      .+...++++.+.......++|.|+++. |+|..|+|.+.+...+..+++.++.|.++||.+++       ++... ...+
T Consensus         6 rLs~~~f~~f~~~G~~~p~~~~~L~~~-G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~-------~~~l~-~~~l   76 (400)
T PF03825_consen    6 RLSLMYFLYFFAYGAFLPYLPLYLESR-GFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSA-------KRILA-LLSL   76 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhH-------HHHHH-HHHH
Confidence            344566666777777888999999985 89999999999999999999999999999998764       44433 3333


Q ss_pred             HhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHH
Q 014698          305 SPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVAL  375 (420)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~  375 (420)
                      ..++.+...... ++........++..++.....+...+...+...  +++.-.|-....+.+|-+++...
T Consensus        77 ~~~~~~~~~~~~-~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~  144 (400)
T PF03825_consen   77 LSALALLLLAFS-SSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALA  144 (400)
T ss_pred             HHHHHHHHHHHh-ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHH
Confidence            333333333332 223344444445555555444444444444332  33444555566666666666544

>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]

Probab=98.74  E-value=9.5e-08  Score=81.57  Aligned_cols=309  Identities=12%  Similarity=0.023  Sum_probs=177.3

Q ss_pred             hhhhcchhhhcch-hHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHH
Q 014698           51 ELLRLPLLFVTWI-RKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFV  129 (420)
Q Consensus        51 ~l~~~p~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~  129 (420)
                      .++-..++.|+-| |++++.-.+.....-.+. .+.++.+.+=+.-+..|...+ ...+.++++=+.++|+++.++.+..
T Consensus        58 ~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~l-v~g~sV~~mQvlE~FyG~~tA-aEIAYysYIYs~Vd~~~Yqrvt~y~  135 (433)
T KOG3810|consen   58 GLVPVFLLTDYLRYKPVVVLQALSGVPVWIML-VFGPSVKAMQVLEFFYGPATA-AEIAYYSYIYSKVDPEMYKRVTGYC  135 (433)
T ss_pred             HHHHHHHHhhhhhcceeeeeeccchhHHHHHH-HhcCCchheeeehhhcChHHH-HHHhhhheeeeecCHHHHHHHHHHh
Confidence            3443444555554 444433322222222222 248888888888889898754 4456688898999999999999999


Q ss_pred             HhhhhhHHHHHHhhHHHhhhccc--hhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhh--hhhh-
Q 014698          130 FGGLSFGSVAGLLLAPPIIENLG--WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSA--SLEE-  204 (420)
Q Consensus       130 ~~~~~~g~~~g~~l~~~l~~~~g--wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-  204 (420)
                      .+..-.|...|..++..+.+.-.  .+..=.+......+......++|+.++..--+..+++....+.++...  +..+ 
T Consensus       136 RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~v~~~e~~~~~~~~~~~  215 (433)
T KOG3810|consen  136 RAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLEDKISVGDLEEMNPQASYMSY  215 (433)
T ss_pred             HHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcccccceeccchhcCccchhhHH
Confidence            99999999999999888876432  333223333333344556667777663211111111110000000000  0000 


Q ss_pred             h--cccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhh-CCCcchhhHHHHhhHHHHHHHHHhhhhhh
Q 014698          205 M--GESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEEL-SLNLTEAAWVSILPPLASVLVTSIAAQFA  281 (420)
Q Consensus       205 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~  281 (420)
                      .  ....-..++.+..+||++..-.+-..+...+++....+.-..-.+.- +-.....|..=++..+.++++.+..|.+.
T Consensus       216 l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~  295 (433)
T KOG3810|consen  216 LRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLN  295 (433)
T ss_pred             HHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHhee
Confidence            0  00001123445667888888777777878888888777766666542 11112234455566667777778888776


Q ss_pred             hhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHH
Q 014698          282 DNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGIT  361 (420)
Q Consensus       282 dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~  361 (420)
                      -++.|.       +..++..+....+.++++... .++.++.....+++...+....+.....+......|.-|..+|+.
T Consensus       296 i~w~r~-------g~~ll~~~s~~~agllf~m~~-t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiN  367 (433)
T KOG3810|consen  296 INWNRW-------GDLLLAVGSAVQAGLLFIMAQ-TQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGIN  367 (433)
T ss_pred             eccchh-------hHHHHHHHHHHhhhhhhhhhc-ccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehH
Confidence            655543       556666665554444444433 333455555556666666555555555566777888889999997


Q ss_pred             HHhhhhhH
Q 014698          362 NTVGAVPG  369 (420)
Q Consensus       362 ~~~~~~g~  369 (420)
                      .++.-+-.
T Consensus       368 TFvAl~lQ  375 (433)
T KOG3810|consen  368 TFVALILQ  375 (433)
T ss_pred             HHHHHHHH
Confidence            76554433

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=98.74  E-value=4.9e-05  Score=70.39  Aligned_cols=225  Identities=10%  Similarity=-0.028  Sum_probs=130.6

Q ss_pred             hhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh----hc--------------------------hHHHHHHHHHHHHhc
Q 014698           52 LLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL----AG--------------------------FMPGLVLSRVLVGIG  101 (420)
Q Consensus        52 l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~----~~--------------------------~~~~l~~~r~l~G~~  101 (420)
                      .+...+.++..|++++-.....+.....+.++.    .+                          +.|...+.-+...+-
T Consensus        62 ~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw  141 (472)
T TIGR00769        62 LIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELW  141 (472)
T ss_pred             HHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHH
Confidence            334444777778888777766666665555442    00                          123333444444444


Q ss_pred             cccchh-hhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhh--------ccchh----HHHHHHHHHHHHHH
Q 014698          102 EGVSPS-AATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE--------NLGWE----SVFYIFGLLGIAWF  168 (420)
Q Consensus       102 ~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~--------~~gwr----~~f~~~~~~~~~~~  168 (420)
                      ...... .-..+++|.++.+|-.|..++...+.++|.++++.+..++.+        ...|.    ..+.+.++.+.+..
T Consensus       142 ~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~  221 (472)
T TIGR00769       142 GSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAII  221 (472)
T ss_pred             HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHH
Confidence            444444 567889999999999999999999999999999999888773        11342    23333444444444


Q ss_pred             HHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHh
Q 014698          169 SGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYF  248 (420)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (420)
                      .+.+++.+....++.. .+.++         +..++..+......++.++|+|.++...+...+++.....+..-.-..+
T Consensus       222 ~~~~~l~~~~~~~~~~-~~~~~---------~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v  291 (472)
T TIGR00769       222 LLYWWVNRNVLTDPRS-YNPAL---------KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKL  291 (472)
T ss_pred             HHHHHHHhcccCCccc-cchhh---------ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4444443322111100 00000         0000011111234467789999998888888877777666665444555


Q ss_pred             hhhhCCCcchh---hHHHHhhHHHHHHHHHhhhhhhhhhhh
Q 014698          249 SEELSLNLTEA---AWVSILPPLASVLVTSIAAQFADNLIA  286 (420)
Q Consensus       249 ~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~~~  286 (420)
                      .+.+..+.+..   |.+....++..++.+++.+++.+|+|-
T Consensus       292 ~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw  332 (472)
T TIGR00769       292 KAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGW  332 (472)
T ss_pred             HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence            55543222222   334455566666667777888898884

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>PF13347 MFS_2: MFS/sugar transport protein

Probab=98.72  E-value=3.8e-08  Score=91.81  Aligned_cols=172  Identities=12%  Similarity=0.066  Sum_probs=113.5

Q ss_pred             HHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhh----hhhhcCcchHHHHHHHHHHHHHHh
Q 014698          231 FCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFAD----NLIATGVETTMVRKICQTIAFLSP  306 (420)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~~~~~~~~~~~~~~~~~~~~~~~  306 (420)
                      +...........+++.|+.+..|.++...|.+.....+..++..++.|.++|    |+|||        +..+..+....
T Consensus        11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grr--------rp~~l~g~i~~   82 (428)
T PF13347_consen   11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRR--------RPWILIGAILL   82 (428)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeeccccccc--------ceEeehhhHHH
Confidence            3444555556678888999999999999999999999999999999999999    67764        33333444444


Q ss_pred             HHHHHHHhhc-C-CCc-----HHHHHHHHHHHHHhhhhhhhhhhhhhhccC-ccchHHHHHHHHHhhhhhHHHHHHHHHH
Q 014698          307 AVCMTLSSID-L-GLP-----HWEIVGILTAGLALSSFALSGLYCTHQDIS-PEYASILLGITNTVGAVPGIVGVALTGY  378 (420)
Q Consensus       307 ~~~~~~~~~~-~-~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~~~~~~g~  378 (420)
                      ++...+.... + +..     .+..+..+++..+......+......+..+ +++|.+..+..+....+|..+.+.+.+.
T Consensus        83 ~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~  162 (428)
T PF13347_consen   83 ALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPI  162 (428)
T ss_pred             HHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhh
Confidence            4443333332 2 111     123334455566666555555555555554 5789999999999999999888888888


Q ss_pred             HhccCC------ceeeeehhhhHHHHHHHHHHhhhccC
Q 014698          379 LLDSTH------SWSMSLFAPSIFFYLTGTIVWLAFAS  410 (420)
Q Consensus       379 l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (420)
                      +.+..+      ++.....+.+++..+...+.....+|
T Consensus       163 l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke  200 (428)
T PF13347_consen  163 LVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE  200 (428)
T ss_pred             hhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence            776554      34444455455444444444444455

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=98.67  E-value=2.3e-07  Score=81.98  Aligned_cols=143  Identities=17%  Similarity=0.047  Sum_probs=115.7

Q ss_pred             ccccccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHH
Q 014698           34 LRIGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLI  113 (420)
Q Consensus        34 ~~~g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i  113 (420)
                      ......+.........++++.+.+-+|.+.|+++..++++..+.++..-+ ......+.++-.+.|...|..+..+.++.
T Consensus       288 ~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~-~~~~~~f~i~gll~g~s~G~~qA~SRSy~  366 (438)
T COG2270         288 TELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIF-LEGELDFWILGLLVGTSLGGAQASSRSYL  366 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHH-ccccHHHHHHHHHHHHhcchHHHHHHHHH
Confidence            34444555555666678889998899999999999999999998877654 55566788888999999999999999999


Q ss_pred             HhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccc-hhHHHHHHHHHHHHHHHHhhhcccC
Q 014698          114 ARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYIFGLLGIAWFSGFKILQEG  177 (420)
Q Consensus       114 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~~~~  177 (420)
                      ++.+|++|-++.+|+++...-.+..+||.+.+.+.+..| -|..+....++..+-++....+|++
T Consensus       367 ~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~  431 (438)
T COG2270         367 ARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP  431 (438)
T ss_pred             HHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence            999999999999999999999999999999998887554 5666666665555555555555554

>TIGR00883 2A0106 metabolite-proton symporter

Probab=98.67  E-value=5.7e-07  Score=82.87  Aligned_cols=121  Identities=12%  Similarity=0.112  Sum_probs=78.4

Q ss_pred             HHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcH-------HHHHHHHHHHHHhhhhhhh
Q 014698          268 LASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPH-------WEIVGILTAGLALSSFALS  340 (420)
Q Consensus       268 ~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~g~~~~~~~~~  340 (420)
                      +...+++++.|+++||+|||         ..+..+.....+...+....++...       ...+.-++.|++.+...+.
T Consensus        46 ~~~~i~~~~~G~l~dr~g~r---------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~  116 (394)
T TIGR00883        46 LARPLGAIVFGHFGDRIGRK---------KTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGG  116 (394)
T ss_pred             HHhhhHHHHhhhhhhhhhhH---------HHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccc
Confidence            34456889999999999963         3333444444444443333332211       2333346667777766666


Q ss_pred             hhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc-------CCceeeeehhhhHHH
Q 014698          341 GLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS-------THSWSMSLFAPSIFF  397 (420)
Q Consensus       341 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-------~~~~~~~~~~~~~~~  397 (420)
                      ......+..|+++|++..+..+....+|..+++.+.+.+.+.       ..+|+..+.+.+...
T Consensus       117 ~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~  180 (394)
T TIGR00883       117 AALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLV  180 (394)
T ss_pred             cHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHH
Confidence            667777888999999999999999999999999887765431       125666666654433

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]

Probab=98.64  E-value=1.2e-06  Score=72.26  Aligned_cols=298  Identities=16%  Similarity=0.098  Sum_probs=157.0

Q ss_pred             cccccchhhhhHH---hHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHH
Q 014698           35 RIGRRGRIYLKDT---NLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATD  111 (420)
Q Consensus        35 ~~g~~~~l~~~~~---~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~  111 (420)
                      -.|+++.++..+.   +....+.+-+.|+-||||.-+.-++.+.++++--  .++.+..++++|.+-|+..+..+..--+
T Consensus        70 gkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiTK--hSpqYkVLmVGR~LGGiaTsLLFSaFEs  147 (454)
T KOG4332|consen   70 GKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITK--HSPQYKVLMVGRVLGGIATSLLFSAFES  147 (454)
T ss_pred             cCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHhh--cCCceEEEeehhhhhhHHHHHHHHHHHH
Confidence            3455555554433   3446666777899999997666666666555432  3788899999999999998887776655


Q ss_pred             -HHHhcCCccccchhhHHHH--------hhhhhHHHHHHhhHHHhhhccc--hhHHHHHHHHHHHHH-HHHhhhcccCcc
Q 014698          112 -LIARSIPLEERSRAVSFVF--------GGLSFGSVAGLLLAPPIIENLG--WESVFYIFGLLGIAW-FSGFKILQEGET  179 (420)
Q Consensus       112 -~i~~~~~~~~r~~~~~~~~--------~~~~~g~~~g~~l~~~l~~~~g--wr~~f~~~~~~~~~~-~~~~~~~~~~~~  179 (420)
                       +++|..+  +|+.-.-+..        .+..+-.+++.+.+..+.+.++  --.+|-..+.+..+. .+..--..|+-.
T Consensus       148 WliaEHne--kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W~ENyg  225 (454)
T KOG4332|consen  148 WLIAEHNE--KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSENYG  225 (454)
T ss_pred             HHHHHhhh--ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhhccC
Confidence             4677653  3332222211        3344445566666666666554  334444433332221 122211222211


Q ss_pred             cCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhh-hhhhHhhhhhCCCcch
Q 014698          180 SNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS-WLPTYFSEELSLNLTE  258 (420)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~  258 (420)
                      +.. ++          ++..++.        +...+.+..++++.++..+..+.-...+.+.. |.|..--+..+.   -
T Consensus       226 dps-~~----------kdlltqf--------~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~i---P  283 (454)
T KOG4332|consen  226 DPS-EN----------KDLLTQF--------KGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI---P  283 (454)
T ss_pred             Chh-hh----------HHHHHHh--------hHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCcccC---C
Confidence            111 00          0000000        00123455677777766666666666666554 666443222222   2


Q ss_pred             hhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHH--Hhh--cC--CCcHHHHHHHHHHHH
Q 014698          259 AAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTL--SSI--DL--GLPHWEIVGILTAGL  332 (420)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~--~~~~~~~~~~~~~g~  332 (420)
                      -|.+++.+.++.++|+-+..++..|-..|       ......+.+......+.+  ...  .+  .++....+.+..+-.
T Consensus       284 hGfiFatFMlASmLGSSla~Rl~s~s~~~-------ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~  356 (454)
T KOG4332|consen  284 HGFIFATFMLASMLGSSLASRLLSRSSPK-------VESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEA  356 (454)
T ss_pred             chhHHHHHHHHHHHhhHHHHHHHhcCCcc-------cchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHH
Confidence            46777777777777777766666554332       111112222222222211  111  11  223334455555666


Q ss_pred             HhhhhhhhhhhhhhhccCccchHHHHHHHHHhh
Q 014698          333 ALSSFALSGLYCTHQDISPEYASILLGITNTVG  365 (420)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~  365 (420)
                      +.|.+.+...-.-.+..|.+.|++.+-....--
T Consensus       357 cvGlfwPSimkmRsqyIPEearstimNfFRvPL  389 (454)
T KOG4332|consen  357 CVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPL  389 (454)
T ss_pred             HHhhcchHHHHHHHhhCCHHHHhhhhhheechh
Confidence            777667766666667788898987766554433

>PRK09848 glucuronide transporter; Provisional

Probab=98.63  E-value=8.5e-07  Score=83.34  Aligned_cols=139  Identities=8%  Similarity=0.028  Sum_probs=82.8

Q ss_pred             HHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHH-HHHHHH
Q 014698          224 WAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRK-ICQTIA  302 (420)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~-~~~~~~  302 (420)
                      +...+..+..+........+++.|+++..|+++.++|.+.....+...+..++.|+++||.++|.-+    |+ ++....
T Consensus        11 ~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr----~~~~~~~~~   86 (448)
T PRK09848         11 VGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGK----FRPFLLFGT   86 (448)
T ss_pred             HhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcC----chHHHHHHH
Confidence            3333444445555556667778899999999999999999999999999999999999998654221    33 333333


Q ss_pred             HHHhHHHHHHHhhcCC--C-c--HHHHHHHHHHHHHhhhhhhhhhhhhhhcc-CccchHHHHHHHHHhhh
Q 014698          303 FLSPAVCMTLSSIDLG--L-P--HWEIVGILTAGLALSSFALSGLYCTHQDI-SPEYASILLGITNTVGA  366 (420)
Q Consensus       303 ~~~~~~~~~~~~~~~~--~-~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~  366 (420)
                      .........++....+  . .  .+......+.+.+.+....+......+.. ++++|.+..+.......
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~  156 (448)
T PRK09848         87 APLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAAS  156 (448)
T ss_pred             HHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHH
Confidence            3233233332222111  1 1  12233334556666655555444433333 45678877666554333

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=98.59  E-value=1.8e-06  Score=78.72  Aligned_cols=158  Identities=11%  Similarity=0.087  Sum_probs=113.0

Q ss_pred             HHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHH
Q 014698          223 VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA  302 (420)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~  302 (420)
                      -......-+..+........|+..|..|..|+++..+|.++.+.=+.-++.-++.|.++||..+|.-+    ++..+..+
T Consensus        14 ki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~Gr----fRP~lL~g   89 (467)
T COG2211          14 KIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGR----FRPWLLWG   89 (467)
T ss_pred             HHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeeccccccccc----ccHHHHHH
Confidence            34444555666667777788999999999999999999999999999999999999999987644222    44444444


Q ss_pred             HHHhHHHHHHHhhcC-----CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhcc-CccchHHHHHHHHHhhhhhHHHHHHHH
Q 014698          303 FLSPAVCMTLSSIDL-----GLPHWEIVGILTAGLALSSFALSGLYCTHQDI-SPEYASILLGITNTVGAVPGIVGVALT  376 (420)
Q Consensus       303 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~~~  376 (420)
                      .+..++...+.+..+     ....+..+...++++++.....+..+...+.. ++++|.+..+.-.....+|..+...+.
T Consensus        90 ~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~  169 (467)
T COG2211          90 AIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLF  169 (467)
T ss_pred             hHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            443333333333333     22344455557778888766666555555443 578999999999999999999888888


Q ss_pred             HHHhccCC
Q 014698          377 GYLLDSTH  384 (420)
Q Consensus       377 g~l~~~~~  384 (420)
                      +.+.+..+
T Consensus       170 ~plv~~~g  177 (467)
T COG2211         170 PPLVKLFG  177 (467)
T ss_pred             HHHHHHhC
Confidence            88886654

>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=98.59  E-value=2.4e-06  Score=79.61  Aligned_cols=152  Identities=11%  Similarity=0.038  Sum_probs=116.4

Q ss_pred             hhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHH
Q 014698          250 EELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILT  329 (420)
Q Consensus       250 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (420)
                      +..++...+.+...+.+.++.+++.+.++.+.||++-        .+.+............+-..  .++.+..++.-++
T Consensus        74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~l--------s~~l~~~~~~w~~~~~~~~~--~~s~~~~ialr~l  143 (495)
T KOG2533|consen   74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPL--------SKGLSVSGILWGLFGFLTAA--VHSFPGLIALRFL  143 (495)
T ss_pred             cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCCh--------HHHHHHHHHHHHHHHHHHHH--HhhhHHHHHHHHH
Confidence            4557778889999999999999999999999999983        33333333332333222222  2334445555688


Q ss_pred             HHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc-----cCCceeeeehhhhHHHHHHHHHH
Q 014698          330 AGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD-----STHSWSMSLFAPSIFFYLTGTIV  404 (420)
Q Consensus       330 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~-----~~~~~~~~~~~~~~~~~~~~~~~  404 (420)
                      .|++.+...|.....+..-+.+++|+.-+|+.+....+|+++|+.+...+.+     ...+|++.|++-+++.+..+++.
T Consensus       144 lGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~  223 (495)
T KOG2533|consen  144 LGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVV  223 (495)
T ss_pred             HHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheE
Confidence            9999998888888888888999999999999999999999999999988653     12489999999999888888877


Q ss_pred             hhhccCC
Q 014698          405 WLAFASS  411 (420)
Q Consensus       405 ~~~~~~~  411 (420)
                      ++..+..
T Consensus       224 f~~lp~~  230 (495)
T KOG2533|consen  224 FFFLPDN  230 (495)
T ss_pred             EEEecCC
Confidence            7766643

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=98.56  E-value=2.5e-05  Score=68.26  Aligned_cols=153  Identities=13%  Similarity=0.115  Sum_probs=96.1

Q ss_pred             hhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHH
Q 014698          251 ELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTA  330 (420)
Q Consensus       251 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (420)
                      .+|++..+++.++........+...+.|.+.||+||        |+..+..+.+-...++.-   ..++....++.=++.
T Consensus        63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Gr--------k~~cl~~cily~~scl~k---~~~~~~~L~~GRvlg  131 (354)
T PF05631_consen   63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGR--------KKACLLFCILYSLSCLTK---HSSNYPVLLLGRVLG  131 (354)
T ss_pred             HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--------hHHHHHHHHHHHHHHHHH---hccccHHHHHHHHHH
Confidence            579999999999999999999999999999999996        344444444444444321   122244444444666


Q ss_pred             HHHhhhhhhhhhhhhh-----hccCccchHHHHHHHHHh-hhhhHHHHHHHHHHHhccCC-ceeeeehhhhHHHHHHHHH
Q 014698          331 GLALSSFALSGLYCTH-----QDISPEYASILLGITNTV-GAVPGIVGVALTGYLLDSTH-SWSMSLFAPSIFFYLTGTI  403 (420)
Q Consensus       331 g~~~~~~~~~~~~~~~-----~~~~~~~~g~~~g~~~~~-~~~g~~~~~~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~  403 (420)
                      |++........-....     +.+|++..+...+..... ..+-.+.+..+.-.+.|..+ +...+|.....+..++.++
T Consensus       132 GiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~  211 (354)
T PF05631_consen  132 GIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVL  211 (354)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHH
Confidence            6666644443333322     235556566666655522 33445555556666666653 3567888877777777777


Q ss_pred             HhhhccCCCCC
Q 014698          404 VWLAFASSKPQ  414 (420)
Q Consensus       404 ~~~~~~~~~~~  414 (420)
                      +...++|+.++
T Consensus       212 I~~~W~ENyg~  222 (354)
T PF05631_consen  212 ILKTWPENYGD  222 (354)
T ss_pred             HHhcccccCCC
Confidence            66666666544

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=98.55  E-value=3.8e-05  Score=74.45  Aligned_cols=121  Identities=17%  Similarity=0.178  Sum_probs=92.1

Q ss_pred             hhhhcchhhhcc-hhHHHHHHHHHHHHHHHHHHHhhch--------HHHHHHHHHHHHhccccchhhhHHHHHhcCCcc-
Q 014698           51 ELLRLPLLFVTW-IRKVLQTGVLIWSLATALLPLLAGF--------MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE-  120 (420)
Q Consensus        51 ~l~~~p~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~~--------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~-  120 (420)
                      .++++.+.|++. ++|.+.++.++..++..+.+. +..        ....+++-.+..+|.|+.-|...+...|.++++ 
T Consensus        40 pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai-~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~  118 (654)
T TIGR00926        40 PLIGAIIADGWLGKFKTILYLSIVYVVGHALLSF-GAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQ  118 (654)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh-ccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccc
Confidence            445555566655 778888888888888877654 311        223566777888999999999999999999754 


Q ss_pred             --ccchhhHHHHhhhhhHHHHHHhhHHHhhhcc-------chhHHHHHHHHHHHHHHHHhh
Q 014698          121 --ERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-------GWESVFYIFGLLGIAWFSGFK  172 (420)
Q Consensus       121 --~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-------gwr~~f~~~~~~~~~~~~~~~  172 (420)
                        +|-+.+.++..+.++|+.+++.+.+++.+..       +|...|.+.++..++..+...
T Consensus       119 ~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~  179 (654)
T TIGR00926       119 LSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFM  179 (654)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHH
Confidence              3677888999999999999999999887543       699999998888777554443

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=98.51  E-value=3.5e-06  Score=77.01  Aligned_cols=109  Identities=21%  Similarity=0.282  Sum_probs=87.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHh--hchH------HHHHHHHHHHHhccccchhhhHHHHHhcCCcc---ccchhhHHHHhhh
Q 014698           65 KVLQTGVLIWSLATALLPLL--AGFM------PGLVLSRVLVGIGEGVSPSAATDLIARSIPLE---ERSRAVSFVFGGL  133 (420)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~--~~~~------~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~  133 (420)
                      |++.++.++..+|.++....  .++.      +.+.++-.+.++|.|+.-|...++.+|.++++   +|.+.+.++..+.
T Consensus         2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i   81 (372)
T PF00854_consen    2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI   81 (372)
T ss_dssp             HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred             HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence            56777888888888874331  2222      56888899999999999999999999999865   4667888899999


Q ss_pred             hhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhh
Q 014698          134 SFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKI  173 (420)
Q Consensus       134 ~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~  173 (420)
                      ++|..+++.+.+++.+++||.+.|.+.++..++..+.+..
T Consensus        82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~  121 (372)
T PF00854_consen   82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS  121 (372)
T ss_dssp             HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred             hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999988887776554433

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]

Probab=98.46  E-value=2.1e-05  Score=68.51  Aligned_cols=311  Identities=14%  Similarity=0.078  Sum_probs=168.7

Q ss_pred             hhhhcchhh-----hcchhHH-HHHHHHHHHHHHHHHHHh----------hchHHHHHHHHHHHHhccccchhhhHHHHH
Q 014698           51 ELLRLPLLF-----VTWIRKV-LQTGVLIWSLATALLPLL----------AGFMPGLVLSRVLVGIGEGVSPSAATDLIA  114 (420)
Q Consensus        51 ~l~~~p~~~-----~~~~r~~-~~~~~~~~~~~~~~~~~~----------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~  114 (420)
                      -+++.|+.|     |.||||. ++-+..+.+......+..          .++...+...-++.-+..+....+.-...-
T Consensus        80 KllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwAL  159 (510)
T KOG3574|consen   80 KLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWAL  159 (510)
T ss_pred             HHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHH
Confidence            678889988     8887763 333444444433333321          122233333445666666777777788888


Q ss_pred             hcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhh-------ccchh---------HHHHHHHHHHHHHHHHhhhcccCc
Q 014698          115 RSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-------NLGWE---------SVFYIFGLLGIAWFSGFKILQEGE  178 (420)
Q Consensus       115 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-------~~gwr---------~~f~~~~~~~~~~~~~~~~~~~~~  178 (420)
                      ...++++.|-+......+.+.|..++..+--.+.+       ..+|.         .-.++.+...++.-.+..+..+++
T Consensus       160 tmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~  239 (510)
T KOG3574|consen  160 TMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKEN  239 (510)
T ss_pred             HhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            88888888877776666666666666544322222       11232         234455555555544444544444


Q ss_pred             ccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcch
Q 014698          179 TSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTE  258 (420)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  258 (420)
                      +.+..+    |.+....+             ...-++++++-|.+..........-.++.+-....+.-+.|+ |.+.++
T Consensus       240 ~~~~~~----e~~~~i~~-------------~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle~-Gv~ke~  301 (510)
T KOG3574|consen  240 DESVDE----ELELGIHE-------------SYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLEH-GVPKEE  301 (510)
T ss_pred             chhhhh----hhhcCHHH-------------HHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHHc-CCChhH
Confidence            332111    10000000             011245777788888888888888888888888888888885 999988


Q ss_pred             hhHHHHhhHHHHHHHHHhhhhhhhhhhhcC-cchHHHHHHH-HHHHHHHhHHHHHHHhh-cC--CCcHHHHHHH-----H
Q 014698          259 AAWVSILPPLASVLVTSIAAQFADNLIATG-VETTMVRKIC-QTIAFLSPAVCMTLSSI-DL--GLPHWEIVGI-----L  328 (420)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~-----~  328 (420)
                      .++....    .++.++..+....|+..++ ...+..|... -................ ..  +..+.....+     .
T Consensus       302 Lal~~v~----~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~  377 (510)
T KOG3574|consen  302 LALIAVP----LVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYA  377 (510)
T ss_pred             heeeeee----hhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHH
Confidence            7766533    3444444444444543321 1111111111 11111111111111111 11  0111111111     2


Q ss_pred             HHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698          329 TAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST  383 (420)
Q Consensus       329 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~  383 (420)
                      +.+..........+....+..+|...|+.+.+.|+..++|+-.-..+...+.|..
T Consensus       378 ~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~l  432 (510)
T KOG3574|consen  378 FHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGL  432 (510)
T ss_pred             HhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccC
Confidence            2222222233334444456678999999999999999999999888998888854

>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]

Probab=98.45  E-value=1.1e-06  Score=82.70  Aligned_cols=175  Identities=16%  Similarity=0.139  Sum_probs=121.9

Q ss_pred             HHHHHHHHHhHHHHHHHhhhh---hhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHH
Q 014698          224 WAMIYAHFCGSWGHYTCLSWL---PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT  300 (420)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~  300 (420)
                      |...+..++.+...+++..-.   -..+++.++.+..+++++.++.........++.+.+.||+|.         +...+
T Consensus        45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~---------R~v~i  115 (509)
T KOG2504|consen   45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGC---------RTVMI  115 (509)
T ss_pred             eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCc---------hHHHH
Confidence            444555555555544443322   233445578888889999999999999999999999999995         34455


Q ss_pred             HHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHh
Q 014698          301 IAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL  380 (420)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~  380 (420)
                      .+.++...++.+..+..+.....+..-++.|++.+....+....+. .+.+++|+.++|+......+|.++-|.+.-.+.
T Consensus       116 ~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~-~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~  194 (509)
T KOG2504|consen  116 AGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILG-TYFEKKRALATGIAVSGTGVGTVVFPPLLKYLL  194 (509)
T ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhh-hHhHHHHHHHHhhhhccCCcceeeHHHHHHHHH
Confidence            5555555555555554432222233336778888766666655554 567889999999999999999999999999999


Q ss_pred             ccCCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698          381 DSTHSWSMSLFAPSIFFYLTGTIVWLAFA  409 (420)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (420)
                      +.. +|+..++..+.+.+-........++
T Consensus       195 ~~~-G~r~~~l~~~~~~l~~~~~~~~~rp  222 (509)
T KOG2504|consen  195 SKY-GWRGALLIFGGISLNVLVAGALLRP  222 (509)
T ss_pred             HHh-CcHHHHHHHHHHHHHHHHHHHHcCC
Confidence            997 7777888777766555555555544

>KOG3762 consensus Predicted transporter [General function prediction only]

Probab=98.43  E-value=3.6e-06  Score=76.60  Aligned_cols=178  Identities=10%  Similarity=0.031  Sum_probs=124.0

Q ss_pred             hhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHH
Q 014698          216 AIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVR  295 (420)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~  295 (420)
                      +++.+++...+.+...+...+...+.+++--++++. +..+..-|......-.+.++.-++.+++.+|+|+-        
T Consensus       366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~-~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv--------  436 (618)
T KOG3762|consen  366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDL-GGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHV--------  436 (618)
T ss_pred             HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhc-CCcceeeeehhhhhccchHHHHHHHHHHHHHhccc--------
Confidence            455667766666666666777777777777777775 65566667776777778888888999999999964        


Q ss_pred             HHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhh-hhhHHHHHH
Q 014698          296 KICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVG-AVPGIVGVA  374 (420)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~~~~~  374 (420)
                       ..+..++..-..-++.+... .+++..+..=++-|+..+.........+....||+.++++.++..... .+|-.+|+.
T Consensus       437 -~v~~lgLa~~~~Rf~~~S~L-~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gsl  514 (618)
T KOG3762|consen  437 -NVMYLGLACNVGRFLYYSYL-QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSL  514 (618)
T ss_pred             -ceeeehhhHHHHHHHHHHHh-cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhh
Confidence             22233333333333333322 234444444488899888888888888888899999999999997554 589999999


Q ss_pred             HHHHHhccCCceeeeehhhhHHHHHHHHHHh
Q 014698          375 LTGYLLDSTHSWSMSLFAPSIFFYLTGTIVW  405 (420)
Q Consensus       375 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (420)
                      ++|.+.+.. +-...|...++.+++.+++..
T Consensus       515 IGG~~v~~f-g~~ttf~~~giAcl~~l~~~~  544 (618)
T KOG3762|consen  515 IGGFVVERF-GARTTFRIFGIACLVTLALFI  544 (618)
T ss_pred             hhhhhheee-hhHHHHHHHHHHHHHHHHHHH
Confidence            999999987 455567776665555554433

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=98.40  E-value=9.8e-06  Score=68.24  Aligned_cols=137  Identities=15%  Similarity=0.143  Sum_probs=87.0

Q ss_pred             HHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHH
Q 014698          234 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS  313 (420)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (420)
                      ....|.+..|.|..- +.+|+|..|...+.....++..+| ++.|.+.||+|+         +....++......++...
T Consensus        15 ~Gt~Y~Fs~yS~~Lk-~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp---------~~~l~iG~~~~~~GY~~~   83 (250)
T PF06813_consen   15 SGTTYTFSAYSPQLK-SRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGP---------WVVLLIGAVLGFVGYGLL   83 (250)
T ss_pred             cCcccchhhhhHHHH-HHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcch---------HHHHHHHHHHHHHHHHHH
Confidence            334555566666554 568999999999988888888764 788999999994         344444444444444333


Q ss_pred             hhc-C----CCcHHHHHHH-HHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc
Q 014698          314 SID-L----GLPHWEIVGI-LTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS  382 (420)
Q Consensus       314 ~~~-~----~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~  382 (420)
                      ... .    +.+.+..... .+.+.+.............+.+| ++||++.|+.-....+++++-..+...+.+.
T Consensus        84 ~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~  157 (250)
T PF06813_consen   84 WLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD  157 (250)
T ss_pred             HHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence            221 1    1122222222 23333333233333444456675 6899999999999999999888888877765

>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]

Probab=98.38  E-value=7.3e-07  Score=77.13  Aligned_cols=123  Identities=13%  Similarity=0.074  Sum_probs=96.1

Q ss_pred             HhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHH----HHHHHHHHHHhccccchhhhHHHHHhcCCccccchh
Q 014698           50 LELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMP----GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA  125 (420)
Q Consensus        50 ~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~  125 (420)
                      |.++.+.+.|+.|||+.+..+.+++++..++... ..+-.    ++..+|++.    ++.+.+.+.|..|.+|.+-|+..
T Consensus       397 GlLIt~~iverlGRKkTMal~l~~f~iflfll~~-c~~rn~~tvllf~arafi----sg~fqvaYvYtPEVyPTavRatg  471 (528)
T KOG0253|consen  397 GLLITGVIVERLGRKKTMALSLILFGIFLFLLTT-CKTRNAYTVLLFTARAFI----SGAFQVAYVYTPEVYPTAVRATG  471 (528)
T ss_pred             chhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHH-hcCcchhHHHHHHHHHHH----hchheEEEEecCcccchhhhhcc
Confidence            6888888899999999999999999998887654 33322    344556544    44566778999999999999999


Q ss_pred             hHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcc
Q 014698          126 VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGET  179 (420)
Q Consensus       126 ~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~  179 (420)
                      .|..+...-+|.++.|.++  +....+-..+..+.+..+++..+...++|-+++
T Consensus       472 vGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtk  523 (528)
T KOG0253|consen  472 VGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETK  523 (528)
T ss_pred             hhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccC
Confidence            9999999999999999998  333334456667777777887788888886654

>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]

Probab=98.38  E-value=7.5e-06  Score=73.13  Aligned_cols=329  Identities=13%  Similarity=0.065  Sum_probs=157.9

Q ss_pred             cchhH-HHHHHHHHHHHHHHHHHHhhchHH-----------------HHHHHHHHHHhccccchhhhHHHHHhcCCcccc
Q 014698           61 TWIRK-VLQTGVLIWSLATALLPLLAGFMP-----------------GLVLSRVLVGIGEGVSPSAATDLIARSIPLEER  122 (420)
Q Consensus        61 ~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~-----------------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r  122 (420)
                      +|||| .+..+....+++.++..+ +.++.                 .++++--+.=++.-.....+.+++.|...++++
T Consensus        98 ~GRRRPfI~~~s~~i~~~l~Lig~-aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~  176 (498)
T KOG0637|consen   98 YGRRRPFILAGSLLIAVSLFLIGY-AADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAK  176 (498)
T ss_pred             cccccchHHHhhHHHHHHHhhhhh-HhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhh
Confidence            34554 555556666666666654 44432                 233444444456557777889999999977766


Q ss_pred             ch-hhHHHHhhhhhHHHHHHhhHHHhhhccchhHHH--HHHHHHHHHH-------HH-HhhhcccCc--cc---CCCCcC
Q 014698          123 SR-AVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF--YIFGLLGIAW-------FS-GFKILQEGE--TS---NGATLA  186 (420)
Q Consensus       123 ~~-~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f--~~~~~~~~~~-------~~-~~~~~~~~~--~~---~~~~~~  186 (420)
                      .+ +++.+.....+|..+|..+++++    +|+-.|  ...-...+.+       .. ..+..+++.  .+   +++...
T Consensus       177 ~~~Ans~f~~f~avGnvLGY~~g~y~----~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~  252 (498)
T KOG0637|consen  177 KTRANSVFSFFMAVGNVLGYALGSYL----GLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSP  252 (498)
T ss_pred             hhccchhHHHHHHhcceeeeeccccc----CceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCC
Confidence            66 99999999999999999988744    443222  1111111110       00 001111110  00   000000


Q ss_pred             ccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHh-hhhhCCCcchh------
Q 014698          187 PRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYF-SEELSLNLTEA------  259 (420)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~------  259 (420)
                      +. .....+........|...     .+  ....|..+.+.+...+.+.+.+.+..+...++ ++.++-|+...      
T Consensus       253 ~~-~~~~~~~~~~~~~~e~fG-----~~--~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~  324 (498)
T KOG0637|consen  253 KG-TTARSKSSKLPFLLEIFG-----AL--KVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAK  324 (498)
T ss_pred             Cc-ccccccccCcchHHHHhc-----hH--hhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHH
Confidence            00 000000000000001100     00  11146778888888888888888777777666 34455443321      


Q ss_pred             ----------hHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHH-------hhc---CCC
Q 014698          260 ----------AWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS-------SID---LGL  319 (420)
Q Consensus       260 ----------~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---~~~  319 (420)
                                .+=..+..+...+.+....++.||+|.|+..........+..++..........       ...   ...
T Consensus       325 ~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~  404 (498)
T KOG0637|consen  325 KLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLT  404 (498)
T ss_pred             HHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhc
Confidence                      122345556666777788899999995432222111111111111100000000       000   000


Q ss_pred             cHHHHHH-HHHHHHHhhhhhhhhhhhhhhccC--ccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHH
Q 014698          320 PHWEIVG-ILTAGLALSSFALSGLYCTHQDIS--PEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIF  396 (420)
Q Consensus       320 ~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~  396 (420)
                      .++..+. .-..+.-...-..........+..  ...+|...|+.|....+...+.....|.+.+..|+-+.+-+..+..
T Consensus       405 ~p~~l~~~y~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~  484 (498)
T KOG0637|consen  405 VPYGALALYAILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAV  484 (498)
T ss_pred             ccHHHHHHHHHhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHH
Confidence            0011111 111111111111111111111111  1235778888888888889988888899999887766655555544


Q ss_pred             HHHHHH
Q 014698          397 FYLTGT  402 (420)
Q Consensus       397 ~~~~~~  402 (420)
                      .+..+.
T Consensus       485 s~~~~~  490 (498)
T KOG0637|consen  485 ALLIGG  490 (498)
T ss_pred             HHHHHH
Confidence            444433

>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]

Probab=98.37  E-value=1.2e-05  Score=76.86  Aligned_cols=135  Identities=12%  Similarity=0.094  Sum_probs=94.2

Q ss_pred             hhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhh
Q 014698          258 EAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSF  337 (420)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  337 (420)
                      +.+++.+...++..++.++.|+++|++||         |..+..+.+...+..++..... +.....++=++.|++.+..
T Consensus        90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GR---------k~~l~~~~~~~~iG~ii~~~a~-~~~~l~~GR~l~G~g~G~~  159 (513)
T KOG0254|consen   90 RQGLLTSILNLGALVGSLLAGRLGDRIGR---------KKTLLLAVVLFLIGAIIIALAP-SWYQLIVGRILTGLGVGGA  159 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------HHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHhccchhhh
Confidence            34789999999999999999999999995         3444444444444444444433 3555666668889999877


Q ss_pred             hhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC-CceeeeehhhhHHHHHHHHH
Q 014698          338 ALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST-HSWSMSLFAPSIFFYLTGTI  403 (420)
Q Consensus       338 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~  403 (420)
                      .........+..|++.||...+..+....+|..++ .+.+...++. .+|+..+.+..+..++..+.
T Consensus       160 ~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~  225 (513)
T KOG0254|consen  160 SVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG  225 (513)
T ss_pred             hhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH
Confidence            76666666666778899999999999888877777 5566555542 25775665555544444444

>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=98.36  E-value=1.1e-05  Score=74.29  Aligned_cols=137  Identities=15%  Similarity=0.032  Sum_probs=85.7

Q ss_pred             hHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhh
Q 014698          260 AWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFAL  339 (420)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  339 (420)
                      +...+...+++++|+++.+.++||+|||       ............+..+.......+.....++.=++.|+..+....
T Consensus        63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK-------~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~  135 (485)
T KOG0569|consen   63 SLIVSIFFIGGMIGSFSSGLLADRFGRK-------NALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTG  135 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcch-------HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHH
Confidence            4456778899999999999999999975       222222222222222222233334455566666888888886666


Q ss_pred             hhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHH-HHHhccCCceeeeehhhhHHHHHHHHH
Q 014698          340 SGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALT-GYLLDSTHSWSMSLFAPSIFFYLTGTI  403 (420)
Q Consensus       340 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~-g~l~~~~~~~~~~~~~~~~~~~~~~~~  403 (420)
                      .......|..|++.||....+......+|..++..++ ..+.+....|...+....+..++..+.
T Consensus       136 ~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~  200 (485)
T KOG0569|consen  136 LVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLAL  200 (485)
T ss_pred             HHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHH
Confidence            6666677778889999999999988888888885544 333333223444444433433333333

>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]

Probab=98.35  E-value=4e-06  Score=80.42  Aligned_cols=140  Identities=16%  Similarity=0.063  Sum_probs=106.2

Q ss_pred             hhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHH
Q 014698          250 EELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILT  329 (420)
Q Consensus       250 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (420)
                      +....+.....+..++..++..+|.++.|.++||+||         |.....+.+...++-......++ .....+.=++
T Consensus       111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GR---------k~~~~~~~~~~~i~~~~~a~a~~-~~~~~~~Rfl  180 (521)
T KOG0255|consen  111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGR---------KPVLLVSLLLFIIFGILTAFAPN-YWMFLIFRFL  180 (521)
T ss_pred             ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhccc---------HHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHH
Confidence            3446677778888899999999999999999999994         45555666665555554444432 4444444588


Q ss_pred             HHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHH
Q 014698          330 AGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTI  403 (420)
Q Consensus       330 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~  403 (420)
                      .|++.++..........|.++|++|+.+..+ ......++.+++...+++..   +|+..+++..+...+..++
T Consensus       181 ~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~  250 (521)
T KOG0255|consen  181 SGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLL  250 (521)
T ss_pred             HHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHH
Confidence            8998888888888888888999999999999 88888999999999999887   6777777766555444443

>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]

Probab=98.34  E-value=6.2e-06  Score=75.47  Aligned_cols=185  Identities=10%  Similarity=0.075  Sum_probs=115.8

Q ss_pred             HHHHHHHHHHHHhHHHHHHHhhhhhhHhhh-hhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698          221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSE-ELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ  299 (420)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~  299 (420)
                      |..+...+..++....+..+..-.-.|+++ +.+-+....|++.+...++..++++..|+...|.+.-       |+.++
T Consensus        34 rsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~-------k~Pli  106 (488)
T KOG2325|consen   34 RSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSV-------KKPLI  106 (488)
T ss_pred             HhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCc-------ccCHH
Confidence            445555666666555555555555567765 2477778889999999999999999999999998753       33444


Q ss_pred             HHHHHHhHHHHHH--HhhcCC-CcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHH
Q 014698          300 TIAFLSPAVCMTL--SSIDLG-LPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALT  376 (420)
Q Consensus       300 ~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~  376 (420)
                      ....+.....++.  ....++ ..++..++=++.|++.+..... -..+.+...+++|.++.+..+....+|..+||.+.
T Consensus       107 ~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~l-R~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q  185 (488)
T KOG2325|consen  107 VSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVL-RAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQ  185 (488)
T ss_pred             HHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHH-HHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHH
Confidence            3333333322222  222222 2333344446777776643333 33344445567888888888887788888888766


Q ss_pred             HHHhcc------------CCceeeeehhhhHHHHHHHHHHhhhccCCCC
Q 014698          377 GYLLDS------------THSWSMSLFAPSIFFYLTGTIVWLAFASSKP  413 (420)
Q Consensus       377 g~l~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (420)
                      ..+...            .+.|+.+-++.++..++..++.+..++|..+
T Consensus       186 ~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~  234 (488)
T KOG2325|consen  186 LAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR  234 (488)
T ss_pred             HHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence            544321            1235666677777777777777777776443

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=98.28  E-value=0.00026  Score=59.77  Aligned_cols=128  Identities=14%  Similarity=0.023  Sum_probs=90.9

Q ss_pred             hhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh------hchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccch
Q 014698           51 ELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL------AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR  124 (420)
Q Consensus        51 ~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~  124 (420)
                      ++..|.+.|+.++|.++.+|.+...++.......      ..++|.+.+..++.|.+.+.....+.....+.+| ++||+
T Consensus        53 G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~  131 (250)
T PF06813_consen   53 GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGT  131 (250)
T ss_pred             cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCc
Confidence            4566667899999999999999999888776532      1457788888888888877777777777778887 68999


Q ss_pred             hhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcc
Q 014698          125 AVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGET  179 (420)
Q Consensus       125 ~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~  179 (420)
                      +.|+.-....++..+-..+...+.+.-.-+..+.....+.++.++...++++.++
T Consensus       132 vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~vr~~~~  186 (250)
T PF06813_consen  132 VVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFVRPVPP  186 (250)
T ss_pred             eehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhheeccCC
Confidence            9999999999998887776666655422333333333334444455555554443

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=98.28  E-value=3.1e-05  Score=67.40  Aligned_cols=150  Identities=20%  Similarity=0.200  Sum_probs=108.6

Q ss_pred             HhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCC
Q 014698          240 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGL  319 (420)
Q Consensus       240 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (420)
                      ....++..- +.+|.|...+|++.++.-++....+++..++.+|+|.+       |.  +..+++...+...+-...  .
T Consensus        31 vgPLL~~Ir-~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~e-------r~--l~~~Llli~~G~~iR~~~--~   98 (395)
T COG2807          31 VGPLLDEIR-QDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEE-------RS--LFLALLLIAAGILIRSLG--G   98 (395)
T ss_pred             hhhhHHHHH-HHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhH-------HH--HHHHHHHHHHHHHHHhcc--c
Confidence            333444443 45799999999999999999999999999999999964       33  334444444444433322  3


Q ss_pred             cHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHH
Q 014698          320 PHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYL  399 (420)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~  399 (420)
                      ....+....+.|.+.+..+......+.+++ |++.+..+|++.+...+++++++.+.-.+.++.++|+.....-+...++
T Consensus        99 ~~~L~~gt~l~G~gIav~nVLLPslIK~~F-pk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~all  177 (395)
T COG2807          99 LPLLFLGTLLAGAGIAVINVLLPSLIKRDF-PKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALL  177 (395)
T ss_pred             HHHHHHHHHHHHhhHHHHHHhhhHHHHhhc-ccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHH
Confidence            455666667778888766655556665555 5678999999999999999999999999998877788777776665554


Q ss_pred             HHH
Q 014698          400 TGT  402 (420)
Q Consensus       400 ~~~  402 (420)
                      +.+
T Consensus       178 Al~  180 (395)
T COG2807         178 ALL  180 (395)
T ss_pred             HHH
Confidence            443

>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS)

Probab=98.25  E-value=0.00016  Score=60.10  Aligned_cols=99  Identities=17%  Similarity=0.184  Sum_probs=57.5

Q ss_pred             cccchhhHHHHhhhhhHHHHHHhhHHHh---hh--ccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhh
Q 014698          120 EERSRAVSFVFGGLSFGSVAGLLLAPPI---IE--NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINM  194 (420)
Q Consensus       120 ~~r~~~~~~~~~~~~~g~~~g~~l~~~l---~~--~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (420)
                      |+|+........+.++|.++.-..--.-   .+  .-.|++.+.+.+++.++-++++..+-++-+...++ +++++    
T Consensus         2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~-~k~~k----   76 (267)
T PF07672_consen    2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPK-EKQEK----   76 (267)
T ss_pred             CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcc-ccccc----
Confidence            6778888888888899987764432111   11  22599999998888777666655553321111111 00000    


Q ss_pred             hhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHH
Q 014698          195 KKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFC  232 (420)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (420)
                               +..+..++.+..+.+|++..|...+.+..
T Consensus        77 ---------~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~  105 (267)
T PF07672_consen   77 ---------ENSTLSKKPSYKSILKEKETWKWILIYGI  105 (267)
T ss_pred             ---------ccccccccchHHHHHccchHHHHHHHHHH
Confidence                     00111223456789999999887766654

>PF12832 MFS_1_like: MFS_1 like family

Probab=98.19  E-value=1.3e-05  Score=53.93  Aligned_cols=61  Identities=20%  Similarity=0.224  Sum_probs=54.1

Q ss_pred             HHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhc
Q 014698          226 MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT  287 (420)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~  287 (420)
                      +-..+++...+......++|.|+++ .|+|+.+.|.+.++..+...++.++.|.++||.+++
T Consensus         5 lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~   65 (77)
T PF12832_consen    5 LKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKR   65 (77)
T ss_pred             HHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence            3456667777788888899999997 599999999999999999999999999999999975

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=98.18  E-value=4.9e-05  Score=73.74  Aligned_cols=162  Identities=14%  Similarity=0.091  Sum_probs=106.2

Q ss_pred             HHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhh
Q 014698          236 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI  315 (420)
Q Consensus       236 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (420)
                      ++|+....+..|+.+.+|++...+..+........-+..+++|+++|++-.+       ++.+.. +.++..++..+...
T Consensus         2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~-------~~tIl~-~~ii~~lG~~llai   73 (654)
T TIGR00926         2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGK-------FKTILY-LSIVYVVGHALLSF   73 (654)
T ss_pred             ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------HHHHHH-HHHHHHHHHHHHHh
Confidence            4566677778888888899988888777777777778888899999987543       333333 33333333333222


Q ss_pred             cCC-------CcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCcc---chHHHHHHHHHhhhhhHHHHHHHHHHHhccCC-
Q 014698          316 DLG-------LPHWEIVGILTAGLALSSFALSGLYCTHQDISPE---YASILLGITNTVGAVPGIVGVALTGYLLDSTH-  384 (420)
Q Consensus       316 ~~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~-  384 (420)
                      ...       .....++++.+...+.+.+-+.......+.++++   .+-+...+.....++|+.+++.+.+++.+..+ 
T Consensus        74 ~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~  153 (654)
T TIGR00926        74 GAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGC  153 (654)
T ss_pred             ccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            211       0122445566667777766666666666666543   47778888899999999999999999875432 


Q ss_pred             -----ceeeeehhhhHHHHHHHHHHh
Q 014698          385 -----SWSMSLFAPSIFFYLTGTIVW  405 (420)
Q Consensus       385 -----~~~~~~~~~~~~~~~~~~~~~  405 (420)
                           +|..+|.+.++.++++.++..
T Consensus       154 fg~~~~~~~aF~i~~i~m~ia~lvf~  179 (654)
T TIGR00926       154 FGCQDCYPLAFGVPAILMILALIVFM  179 (654)
T ss_pred             cccCcchHHHHHHHHHHHHHHHHHHH
Confidence                 466667666665555544443

>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

Probab=98.16  E-value=2.4e-05  Score=69.33  Aligned_cols=122  Identities=34%  Similarity=0.420  Sum_probs=94.7

Q ss_pred             hhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhc--hHHHHHHHHHHHHhccccchhhhHHHHHhcCCc-c
Q 014698           44 LKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAG--FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL-E  120 (420)
Q Consensus        44 ~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~  120 (420)
                      ......+....+.+.|+.+||+.+..+.....++.+...+ ..  +.+.+++.|+.+|++.+...+...+++.|+.|+ +
T Consensus        49 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  127 (338)
T COG0477          49 FLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLAL-APNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEAT  127 (338)
T ss_pred             HHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHh-CccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchh
Confidence            3333344567777788888888888888765555555554 44  488999999999999999999999999999997 6


Q ss_pred             ccchhhHHHHh-hhhhHHHHHHhhHHHhhhc--cchhHHHHHHHHHHHH
Q 014698          121 ERSRAVSFVFG-GLSFGSVAGLLLAPPIIEN--LGWESVFYIFGLLGIA  166 (420)
Q Consensus       121 ~r~~~~~~~~~-~~~~g~~~g~~l~~~l~~~--~gwr~~f~~~~~~~~~  166 (420)
                      +|+...+.... ...+|..++|.+++.+...  .+||..|.........
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (338)
T COG0477         128 ERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLL  176 (338)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence            78999998888 5888999999887766654  5799977766665544

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=98.15  E-value=9.5e-05  Score=68.75  Aligned_cols=161  Identities=18%  Similarity=0.179  Sum_probs=104.4

Q ss_pred             hhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCC---Cc
Q 014698          244 LPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLG---LP  320 (420)
Q Consensus       244 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  320 (420)
                      ...|+++.+|.++.+...+.....+.-. ..++.|.++|-+.-.+.+    ||..+.++.++..+........+.   +.
T Consensus        12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~r----r~~Y~~i~~~~~~~~~~~~~~~~~~~~s~   86 (433)
T PF03092_consen   12 IYPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYR----RKPYMIIGWLLGAVSALVLALLPASESSA   86 (433)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCc----chHHHHHHHHHHHHHHHHHHhcccccchh
Confidence            3456778889999998887777666554 456789999998532222    666666666555443333332222   22


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhhhhhhcc--CccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHH
Q 014698          321 HWEIVGILTAGLALSSFALSGLYCTHQDI--SPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFY  398 (420)
Q Consensus       321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~  398 (420)
                      ....+.+++..++........-..+.|..  .|+.+|...+.......+|+.++..+.|.+.+.. +++..|.+.+.+..
T Consensus        87 ~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~-~~~~~f~i~~~~~~  165 (433)
T PF03092_consen   87 AIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF-GPQGVFLISAALPL  165 (433)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC-CCeEEehHHHHHHH
Confidence            33333344445555544444444444443  2344889999999999999999999999999986 78888888776666


Q ss_pred             HHHHHHhhhccC
Q 014698          399 LTGTIVWLAFAS  410 (420)
Q Consensus       399 ~~~~~~~~~~~~  410 (420)
                      +..+..+...+|
T Consensus       166 l~~~~~~~~~~e  177 (433)
T PF03092_consen  166 LMLIVALFLLEE  177 (433)
T ss_pred             HHHHHHHHhhhh
Confidence            665555555554

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>KOG3762 consensus Predicted transporter [General function prediction only]

Probab=98.12  E-value=4.5e-06  Score=76.02  Aligned_cols=121  Identities=17%  Similarity=0.113  Sum_probs=105.9

Q ss_pred             hhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHH
Q 014698           51 ELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF  130 (420)
Q Consensus        51 ~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~  130 (420)
                      -.+...+..+.|+-+++..++.+..+=.+..+. .+|.|+.+-..+++|+..+..+.+..+|+++..||+-|+.+.++.+
T Consensus       423 ~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~-L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~  501 (618)
T KOG3762|consen  423 YFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSY-LQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQ  501 (618)
T ss_pred             HHHHHHHHHHhcccceeeehhhHHHHHHHHHHH-hcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHH
Confidence            444456678888889999999999988888876 8999999999999999999999999999999999999999999876


Q ss_pred             -hhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhh
Q 014698          131 -GGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFK  172 (420)
Q Consensus       131 -~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~  172 (420)
                       ....+|--+|.++||.+.+.+|=|..|...++.+++.++...
T Consensus       502 g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~  544 (618)
T KOG3762|consen  502 GIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFI  544 (618)
T ss_pred             HHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHH
Confidence             556789999999999999999999999999988887554443

>TIGR01272 gluP glucose/galactose transporter

Probab=98.11  E-value=3e-05  Score=68.73  Aligned_cols=119  Identities=10%  Similarity=0.006  Sum_probs=89.5

Q ss_pred             hhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCcc
Q 014698           41 RIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE  120 (420)
Q Consensus        41 ~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~  120 (420)
                      ..+.....++.++..++.||.++||++..+..+..++.++... .++.. ....-++.|++.+..+|...+...+..|+ 
T Consensus       185 s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~-~~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~-  261 (310)
T TIGR01272       185 AYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAAL-THGYV-AMWFVLALGLFNSIMFPTIFSLALNALGR-  261 (310)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH-cCCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhh-
Confidence            3444455567888889999999999888888777777655543 44332 23455588999999999999999998874 


Q ss_pred             ccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHH
Q 014698          121 ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLL  163 (420)
Q Consensus       121 ~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~  163 (420)
                      +.+++.++. ....+|..+.|++.|.+.|..|.+..|++..+.
T Consensus       262 ~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~  303 (310)
T TIGR01272       262 HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC  303 (310)
T ss_pred             hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence            345666765 566789999999999999988988888754433

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions

Probab=98.10  E-value=0.0033  Score=58.79  Aligned_cols=168  Identities=10%  Similarity=0.048  Sum_probs=99.9

Q ss_pred             hHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhh---------ccchhHHHHH----HHHHHHHHHHHhhhcc
Q 014698          109 ATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE---------NLGWESVFYI----FGLLGIAWFSGFKILQ  175 (420)
Q Consensus       109 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~---------~~gwr~~f~~----~~~~~~~~~~~~~~~~  175 (420)
                      -..+.+|.++.+|-.|..++...+.++|.++++.+..++.+         ...|......    ..+.+++......++.
T Consensus       165 FW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~  244 (491)
T PF03219_consen  165 FWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMN  244 (491)
T ss_pred             HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46788999999999999999999999999999999888877         1246544322    2222222333333333


Q ss_pred             cCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCC
Q 014698          176 EGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLN  255 (420)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  255 (420)
                      +....++... +...         ++.++..+..-..+++.++|+|.+..+.+...+++.....+....-..+++.+.-+
T Consensus       245 ~~vl~~~~~~-~~~~---------~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~  314 (491)
T PF03219_consen  245 KNVLTDPRFY-PSAK---------KKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDP  314 (491)
T ss_pred             HHccCccccc-hhhh---------cccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence            2221111110 0000         00000011111234567888999998888888887777777665555565554433


Q ss_pred             cchh---hHHHHhhHHHHHHHHHhhhhhhhhhhh
Q 014698          256 LTEA---AWVSILPPLASVLVTSIAAQFADNLIA  286 (420)
Q Consensus       256 ~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~~~  286 (420)
                      .+..   |......++..++..++++.+.+|+|-
T Consensus       315 ~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW  348 (491)
T PF03219_consen  315 NDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGW  348 (491)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence            2222   344555666666777778888888874

One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=98.08  E-value=3.8e-05  Score=59.62  Aligned_cols=99  Identities=14%  Similarity=0.060  Sum_probs=86.3

Q ss_pred             HhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhh
Q 014698           47 TNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAV  126 (420)
Q Consensus        47 ~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~  126 (420)
                      ..+.+++.+++..+.+.|+.++++.+.+.+-....  +-++.+.++.+..+.|++.+..++....++.+..++++|++..
T Consensus        50 ~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~--~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~  127 (156)
T PF05978_consen   50 FAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF--FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNT  127 (156)
T ss_pred             HHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHH
Confidence            44568888888999999999999999998766543  3677789999999999999999999999999999999999999


Q ss_pred             HHHHhhhhhHHHHHHhhHHHh
Q 014698          127 SFVFGGLSFGSVAGLLLAPPI  147 (420)
Q Consensus       127 ~~~~~~~~~g~~~g~~l~~~l  147 (420)
                      ++.......+.++|.++...+
T Consensus       128 ~ifw~i~~~s~i~G~~~~~~~  148 (156)
T PF05978_consen  128 GIFWAIFQSSLIFGNLFLFFI  148 (156)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            999999999988888776554

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]

Probab=98.05  E-value=0.0001  Score=62.35  Aligned_cols=310  Identities=14%  Similarity=0.085  Sum_probs=147.3

Q ss_pred             hhhhcchhhhcc-hhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHH
Q 014698           51 ELLRLPLLFVTW-IRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFV  129 (420)
Q Consensus        51 ~l~~~p~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~  129 (420)
                      -+..+...||+. .+|+. +...+.+.+..+.++ +++.++-+.+-.+..++.|.....-.++- ..+|+.    ..+-+
T Consensus        79 Kl~~Pff~~rfpf~~Ri~-~~v~~sa~s~~lVaf-s~s~~~sL~GV~~aSissGlGEiTFL~ls-s~Y~~~----~i~~W  151 (409)
T KOG3880|consen   79 KLTAPFFIHRFPFGFRIA-LVVLLSALSFFLVAF-SNSVPMSLLGVVFASISSGLGEITFLALS-SRYPSI----VIAGW  151 (409)
T ss_pred             HHhchhhhhhcccchHHH-HHHHHHhcceEEEEe-ccchhHHHhhhhhhhhcCCcceeehhhhh-ccCCCc----eeccc
Confidence            334444466665 33433 344555566666665 89999888888888888776665543333 333322    33444


Q ss_pred             HhhhhhHHHHHHhhHHHhhh--ccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhc-
Q 014698          130 FGGLSFGSVAGLLLAPPIIE--NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMG-  206 (420)
Q Consensus       130 ~~~~~~g~~~g~~l~~~l~~--~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  206 (420)
                      +.+.+.+.++|..--..+.+  .++-|....+...+.++....++++.++|+.......+.+.+...+...+.+..|.+ 
T Consensus       152 SSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~ptl~~~~~~~~~~~~~~~a~e~~s  231 (409)
T KOG3880|consen  152 SSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYSPTLQPSTEIIPSQYLPFEAAEEKS  231 (409)
T ss_pred             cCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccccCCCcCccceeccCCCCccccccccc
Confidence            55555555666554445555  235677777777666665555555544443322111111111000000000000111 


Q ss_pred             ccccccchhhhh-hcHHHHHHHHHHHHhHHHHHHHhh-hhhhHhhh-hhCCCcc---hhhHHHHhhHHHHHHHHHhhhhh
Q 014698          207 ESLKDVPWKAIF-RSKAVWAMIYAHFCGSWGHYTCLS-WLPTYFSE-ELSLNLT---EAAWVSILPPLASVLVTSIAAQF  280 (420)
Q Consensus       207 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~g~~~~---~~~~~~~~~~~~~~~~~~~~g~l  280 (420)
                      ...+....++-+ +-++.....+-....++..|.++. ..++.+-+ ..|++..   |.-+....+.++..+++-     
T Consensus       232 v~s~~~~~~e~~~~i~pll~~MvPL~~VY~~EY~INQGl~ell~F~c~~g~sls~~sqYRwyqvlYQlGVFiSRS-----  306 (409)
T KOG3880|consen  232 VPSRRLGLKETLKRIKPLLKYMVPLALVYFAEYFINQGLAELLLFPCSHGFSLSKDSQYRWYQVLYQLGVFISRS-----  306 (409)
T ss_pred             CchhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhEEeccccCCccchhhcchhhheeeeeeEEEEec-----
Confidence            011111122222 123333344455555556655554 33333221 1233322   234555555544332221     


Q ss_pred             hhhhhhcCcchHHHHHHHHHHHHHHhHHHH--HHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHH
Q 014698          281 ADNLIATGVETTMVRKICQTIAFLSPAVCM--TLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILL  358 (420)
Q Consensus       281 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~  358 (420)
                      +-|+-+-    +. -+.+.+.-++-....+  ..+.+. ++.+...+..+.-|+..|.........+.++.+|++|--++
T Consensus       307 S~~~~~~----p~-l~~LailQ~vNl~ff~~~a~~~ft-psi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfam  380 (409)
T KOG3880|consen  307 SINLFTM----PY-LWLLAILQFVNLLFFLLQAWYWFT-PSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAM  380 (409)
T ss_pred             cceEEec----hH-HHHHHHHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhH
Confidence            1111110    00 1111111111111111  112222 22333333445567777777777777788889999999999


Q ss_pred             HHHHHhhhhhHHHHHHHHHH
Q 014698          359 GITNTVGAVPGIVGVALTGY  378 (420)
Q Consensus       359 g~~~~~~~~g~~~~~~~~g~  378 (420)
                      +.....-.+|..++..+.=.
T Consensus       381 savs~sDS~Gi~lA~~lalp  400 (409)
T KOG3880|consen  381 SAVSISDSIGIFLAGLLALP  400 (409)
T ss_pred             hhheecchhhHHHHHHHhcc
Confidence            99888877877777665533

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=98.00  E-value=0.00011  Score=65.46  Aligned_cols=131  Identities=19%  Similarity=0.032  Sum_probs=87.5

Q ss_pred             hhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhh-hcCcchHHHHHHHHHHHHHHhHHHHH-----HHhhcC----
Q 014698          248 FSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLI-ATGVETTMVRKICQTIAFLSPAVCMT-----LSSIDL----  317 (420)
Q Consensus       248 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~----  317 (420)
                      +..+++.+..-.+.+.+...+.. +.++..|..+|+.+ ..+.+    |...+..+.........     ......    
T Consensus         6 MIvEL~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~r----RtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~   80 (403)
T PF03209_consen    6 MIVELGVPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWR----RTPYIWGGTLLQAGGLAIAPFALLLLAESGQQ   80 (403)
T ss_pred             HHHHhccHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCC----chhhhHHHHHHHHHHHHHHHHHHHHHcccccc
Confidence            33456888887887777766655 46889999999987 11111    22322222222222111     111111    


Q ss_pred             -C-CcH----HHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698          318 -G-LPH----WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST  383 (420)
Q Consensus       318 -~-~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~  383 (420)
                       + ..+    .....+.++|.+.+....+......+..|+|+|+++.++...+.-+|.+++..+.|.+.|.+
T Consensus        81 ~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~  152 (403)
T PF03209_consen   81 SSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPF  152 (403)
T ss_pred             cccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence             0 111    22334567788888888888888889999999999999999999999999999999999875

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]

Probab=97.97  E-value=0.0035  Score=57.43  Aligned_cols=278  Identities=11%  Similarity=0.039  Sum_probs=134.9

Q ss_pred             hccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhh-----cc--------c---hhHHHHHHHHH
Q 014698          100 IGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-----NL--------G---WESVFYIFGLL  163 (420)
Q Consensus       100 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-----~~--------g---wr~~f~~~~~~  163 (420)
                      +-.+....+.-...-....+++++.+..-...+.+.|..++..+--.+.+     .+        |   -..-..+.|..
T Consensus       130 fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~  209 (544)
T PF13000_consen  130 FLCATQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWV  209 (544)
T ss_pred             HHHccCCceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHH
Confidence            33455555666666677777888777776666666666665544333322     00        1   11223344555


Q ss_pred             HHHHHHHhhhcccCcccCCC-CcCcc---chhhhhh----hhhhh--hhhhh-cccccccchhhhhhcHHHHHHHHHHHH
Q 014698          164 GIAWFSGFKILQEGETSNGA-TLAPR---SNYINMK----KSLSA--SLEEM-GESLKDVPWKAIFRSKAVWAMIYAHFC  232 (420)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~----~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (420)
                      .++.-+...+++++++..+. .+.+.   ++...++    .+..+  ..+|. .-+..-....+++|.|++..+.+....
T Consensus       210 ~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~  289 (544)
T PF13000_consen  210 FLIVTILVAFFKKEKPHSESLPKIEPINKSDGKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLT  289 (544)
T ss_pred             HHHHHHHHheEeecccccccCccccccccccccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHH
Confidence            55544444555544432211 11010   0000000    00000  00000 000111123456778888888888888


Q ss_pred             hHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcch-------H-------------
Q 014698          233 GSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVET-------T-------------  292 (420)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~-------~-------------  292 (420)
                      .-.++..-......-+.|. |++.++.+.+..+    .++..++.|+.+.|+.+.+...       +             
T Consensus       290 ~KigF~a~da~T~LKLlEk-G~~KE~LAl~~li----~~P~qii~~~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~  364 (544)
T PF13000_consen  290 AKIGFQANDAVTSLKLLEK-GLSKEDLALLVLI----DFPFQIILPYYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLV  364 (544)
T ss_pred             HHhccccchhhhHHHHHHc-CCCHHHhHHHHHH----hhhHHHHHHHHhhhhhcCCCccccccccccccccccchhhhhh
Confidence            8888777777777777774 9999987766543    4455555566666654332100       0             


Q ss_pred             ----HHHHHHHHHH--HHHhHHHHHH-Hhhc-CCCcHHHHHHHHH----HHHHhhhhhhhhh-hhhhhccCccchHHHHH
Q 014698          293 ----MVRKICQTIA--FLSPAVCMTL-SSID-LGLPHWEIVGILT----AGLALSSFALSGL-YCTHQDISPEYASILLG  359 (420)
Q Consensus       293 ----~~~~~~~~~~--~~~~~~~~~~-~~~~-~~~~~~~~~~~~~----~g~~~~~~~~~~~-~~~~~~~~~~~~g~~~g  359 (420)
                          ..+.+.....  +......... ..++ .+........+++    ++-+....+.... +.-.+..+|..-|+.+.
T Consensus       365 g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMT  444 (544)
T PF13000_consen  365 GDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMT  444 (544)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHH
Confidence                0111111111  1111111111 1111 1111111111211    2222222222222 22334468899999999


Q ss_pred             HHHHhhhhhHHHHHHHHHHHhcc
Q 014698          360 ITNTVGAVPGIVGVALTGYLLDS  382 (420)
Q Consensus       360 ~~~~~~~~g~~~~~~~~g~l~~~  382 (420)
                      +.|+..++|+..-..+.=++.|.
T Consensus       445 LLNTvSNLGGtWP~~~vL~lVD~  467 (544)
T PF13000_consen  445 LLNTVSNLGGTWPRTFVLWLVDY  467 (544)
T ss_pred             HHHHHHhcCCCchHHHHHHHhhh
Confidence            99999999998887777777663

This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane

>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]

Probab=97.96  E-value=0.00021  Score=66.26  Aligned_cols=136  Identities=14%  Similarity=0.154  Sum_probs=89.2

Q ss_pred             hHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhh
Q 014698          266 PPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCT  345 (420)
Q Consensus       266 ~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  345 (420)
                      .++..++.++..|.++||+|||         ..+........+........   .++..+ ..-...+............
T Consensus        71 ~~~~~~i~s~~iG~lSD~~grk---------~~L~~~~~~~~l~~~~~~~~---~~~~~~-~~~l~g~~~~~~s~~~a~v  137 (463)
T KOG2816|consen   71 AGLLTLISSPLIGALSDRYGRK---------VVLLLPLFGTILPALCLLFQ---GYWFFL-LLGLSGGFSAIFSVGFAYV  137 (463)
T ss_pred             hHHHHHHHHhhhHHhhhhhhhh---------hhHHHHHHHHHHhHHHHHHH---HHHHhh-hcccccchhhhhhhhhhhe
Confidence            3677888899999999999965         22222222222211111111   122222 2212222233444455555


Q ss_pred             hhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCCCC
Q 014698          346 HQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQN  415 (420)
Q Consensus       346 ~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (420)
                      .+....++|....|+.+.....+..++|.+.+.+.+.. ++...+.+..+...+.........+++..++
T Consensus       138 adis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~-~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~  206 (463)
T KOG2816|consen  138 ADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFL-GIALVFLIAAASGILSLLYMLLFLPESLQEK  206 (463)
T ss_pred             eeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhhccccccCcc
Confidence            66677889999999999999999999999999999985 7877888888777777777777777655443

>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=97.85  E-value=0.00046  Score=62.04  Aligned_cols=129  Identities=16%  Similarity=0.047  Sum_probs=79.3

Q ss_pred             hhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhh--cC---CC
Q 014698          245 PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI--DL---GL  319 (420)
Q Consensus       245 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~  319 (420)
                      ..+.++.|| +...+-+...++.+..++..+.+.|+.||+|-|         .....+.....+...+-..  .+   +.
T Consensus        68 ~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR---------~a~llgt~ln~iGa~Ir~iss~p~v~~~  137 (480)
T KOG2563|consen   68 NNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLR---------TALLLGTVLNGIGAWIRLISSLPFVPPL  137 (480)
T ss_pred             HHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchH---------HHHHHHHHHHHHHHHHhhhccCcccccc
Confidence            345566677 666677888888899999999999999999943         3333333333333222211  11   21


Q ss_pred             cH--HHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698          320 PH--WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST  383 (420)
Q Consensus       320 ~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~  383 (420)
                      .+  ....+-.+.+...-.......-....-+++++|+++..+..+...+|.+++..+...+..+.
T Consensus       138 f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~  203 (480)
T KOG2563|consen  138 FRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS  203 (480)
T ss_pred             chhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence            22  22222233333332222222222333489999999999999999999999998888887664

>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT)

Probab=97.69  E-value=0.0074  Score=56.00  Aligned_cols=57  Identities=12%  Similarity=0.096  Sum_probs=43.5

Q ss_pred             CcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHH
Q 014698          319 LPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVAL  375 (420)
Q Consensus       319 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~  375 (420)
                      +..+..+..+++|+..|-.....+....+.+++++|..+-.+......+|-.+|..+
T Consensus       371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l  427 (437)
T TIGR00939       371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL  427 (437)
T ss_pred             ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344555667888888887777777777777888889888888888888887777765

>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]

Probab=97.65  E-value=3.1e-05  Score=69.41  Aligned_cols=129  Identities=12%  Similarity=0.048  Sum_probs=101.2

Q ss_pred             HhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhch-H-------HHHHHHHHHHHhccccchhhhHHHHHhcCCccc
Q 014698           50 LELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGF-M-------PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE  121 (420)
Q Consensus        50 ~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~-------~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~  121 (420)
                      |..+...+.|+.|||++.+.+.+++++..+..+. ..| .       ..+.+..++.-+|   .......+-+|.+|.+-
T Consensus       364 Gyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~-~y~~~~~~~Gf~v~y~l~~ff~NFG---Pn~ttfivpaE~FParv  439 (538)
T KOG0252|consen  364 GYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAG-PYNQLENTIGFVVLYSLTFFFGNFG---PNATTFIVPAEIFPARV  439 (538)
T ss_pred             ceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcC-CcccccccCceeehHHHHHHHHhcC---CCceeEEeehhhchHHH
Confidence            4455555699999999999999999999888775 544 1       1222333333333   33344667899999999


Q ss_pred             cchhhHHHHhhhhhHHHHHHhhHHHhhh-----ccchhHHHHHHHHHHHHHHHHhhhcccCcccCC
Q 014698          122 RSRAVSFVFGGLSFGSVAGLLLAPPIIE-----NLGWESVFYIFGLLGIAWFSGFKILQEGETSNG  182 (420)
Q Consensus       122 r~~~~~~~~~~~~~g~~~g~~l~~~l~~-----~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~  182 (420)
                      |+..-|+..+..-.|.++|...-.++.+     ..+-|.++++.+...++..+..+++||+..+..
T Consensus       440 R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~l  505 (538)
T KOG0252|consen  440 RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKGKSL  505 (538)
T ss_pred             hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccccCH
Confidence            9999999999999999999999999988     678999999999999988888889998765443

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=97.63  E-value=3.2e-06  Score=79.58  Aligned_cols=134  Identities=11%  Similarity=0.043  Sum_probs=92.3

Q ss_pred             hhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcC--CCcHHHHHHHHHHHHHhh
Q 014698          258 EAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDL--GLPHWEIVGILTAGLALS  335 (420)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~  335 (420)
                      +.++..+...++..+|+++.|.+.||+|||         .....+.....++..+....+  .+.....+.-++.|++.+
T Consensus        47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk---------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g  117 (451)
T PF00083_consen   47 LSSLLTSSFFIGAIVGALIFGFLADRYGRK---------PALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIG  117 (451)
T ss_pred             HHHHHHHHHHhhhccccccccccccccccc---------ccccccccccccccccccccccccccccccccccccccccc
Confidence            457788899999999999999999999964         333344444444444433333  123444445578899888


Q ss_pred             hhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC--CceeeeehhhhHHHHHH
Q 014698          336 SFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST--HSWSMSLFAPSIFFYLT  400 (420)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~--~~~~~~~~~~~~~~~~~  400 (420)
                      ...........|..|+++|+...++.+....+|..++..+.-.+.+..  ..|+..+.+.++..++.
T Consensus       118 ~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~  184 (451)
T PF00083_consen  118 GAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLV  184 (451)
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            777777777778889999999999999888888888776654443222  13776666655544433

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]

Probab=97.62  E-value=0.024  Score=54.37  Aligned_cols=119  Identities=20%  Similarity=0.106  Sum_probs=88.0

Q ss_pred             hhhhcchhhhcc-hhHHHHHHHHHHHHHHHHHHHhh--c-------------------h---HHHHHHHHHHHHhccccc
Q 014698           51 ELLRLPLLFVTW-IRKVLQTGVLIWSLATALLPLLA--G-------------------F---MPGLVLSRVLVGIGEGVS  105 (420)
Q Consensus        51 ~l~~~p~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~--~-------------------~---~~~l~~~r~l~G~~~~~~  105 (420)
                      .+.+..+.|-+. |-+++.++.++..++..+....+  +                   +   ...+..+.-+..+|.|+.
T Consensus        90 ~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~  169 (571)
T KOG1237|consen   90 PLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGI  169 (571)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCC
Confidence            466666677776 66788888877777755443211  0                   0   124666667778899999


Q ss_pred             hhhhHHHHHhcCC---c-c--ccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHH
Q 014698          106 PSAATDLIARSIP---L-E--ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFS  169 (420)
Q Consensus       106 ~~~~~~~i~~~~~---~-~--~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~  169 (420)
                      -|...+.-+|-++   + +  ++...+.++....+.|..++..+..+..++.+|.+.|.+..+...+.++
T Consensus       170 r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~  239 (571)
T KOG1237|consen  170 RPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAIL  239 (571)
T ss_pred             CCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHH
Confidence            9999999999998   3 2  2347788899999999999999999998889999999887776655443

>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]

Probab=97.49  E-value=0.0013  Score=55.43  Aligned_cols=131  Identities=15%  Similarity=0.091  Sum_probs=85.0

Q ss_pred             chhhhhHHhHHhh---hhcchhhhcchhHHHHHHHHHHHHH-HHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHh
Q 014698           40 GRIYLKDTNLLEL---LRLPLLFVTWIRKVLQTGVLIWSLA-TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIAR  115 (420)
Q Consensus        40 ~~l~~~~~~~~~l---~~~p~~~~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~  115 (420)
                      +.+.+..+.+.+.   +.+.+.|++|++-+.+.+..+..+. -....+   +++.=.....+.|+..+..-...-..++.
T Consensus       303 ~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F---t~lsPy~~m~~lGLsysllAcslWP~va~  379 (459)
T KOG4686|consen  303 GNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF---TFLSPYTSMTFLGLSYSLLACSLWPCVAS  379 (459)
T ss_pred             cchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh---hhccHHHHHHHHhhhHHHHHHHHhhhhhh
Confidence            4444444444433   3444588888887666655554443 333322   23333466677888766555556677888


Q ss_pred             cCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccc---hhHHHHH-HHHHHHHHHHHhhh
Q 014698          116 SIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG---WESVFYI-FGLLGIAWFSGFKI  173 (420)
Q Consensus       116 ~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g---wr~~f~~-~~~~~~~~~~~~~~  173 (420)
                      ..|+++.|.+.|..+...++|..+-|++++.+.+.-|   |-..|.+ .+.+++....+.+.
T Consensus       380 ~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~  441 (459)
T KOG4686|consen  380 LVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFY  441 (459)
T ss_pred             hCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999998544   5445544 44444444333333

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=97.08  E-value=0.033  Score=50.57  Aligned_cols=159  Identities=12%  Similarity=-0.040  Sum_probs=99.1

Q ss_pred             HHhhhhhhHhhhh-hCCCcchhhHHHHhhHH-HHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhc
Q 014698          239 TCLSWLPTYFSEE-LSLNLTEAAWVSILPPL-ASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID  316 (420)
Q Consensus       239 ~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (420)
                      ....++..|+.+. .|++.++..--.-+... ..++..+....+.|.++.         |..++...+...+...+....
T Consensus        21 PsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Y---------kpviil~~~~~i~t~~lll~~   91 (412)
T PF01770_consen   21 PSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRY---------KPVIILQALSYIITWLLLLFG   91 (412)
T ss_pred             CCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhh---------hHHHHHHHHHHHHHHHHHHHH
Confidence            3456888888876 79988887544333333 445555667789999984         455555555544444444443


Q ss_pred             CCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC-CceeeeehhhhH
Q 014698          317 LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST-HSWSMSLFAPSI  395 (420)
Q Consensus       317 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-~~~~~~~~~~~~  395 (420)
                      . +....-+.-+..|...+. -......+-..+|+++.-++.+......-+|..++..++-.+.+.. .++....++...
T Consensus        92 ~-sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~  169 (412)
T PF01770_consen   92 T-SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLA  169 (412)
T ss_pred             C-cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence            3 244444555667776653 3333344456678999999999999999999999888888777632 245544445444


Q ss_pred             HHHHHHHHHhhhc
Q 014698          396 FFYLTGTIVWLAF  408 (420)
Q Consensus       396 ~~~~~~~~~~~~~  408 (420)
                      ...++.++.+++.
T Consensus       170 ~~~~a~~~~~fLP  182 (412)
T PF01770_consen  170 SVSLALLIALFLP  182 (412)
T ss_pred             HHHHHHHHHHHcC
Confidence            4444444444443

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=97.03  E-value=0.086  Score=41.08  Aligned_cols=108  Identities=10%  Similarity=-0.071  Sum_probs=72.6

Q ss_pred             HHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhh
Q 014698          263 SILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGL  342 (420)
Q Consensus       263 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  342 (420)
                      .++......+..++.+.+.+++|.         |+.+..+.+...+........  +.+..+....+.|++.+......-
T Consensus        43 lai~Y~~~~~s~l~~P~iv~~lg~---------K~sm~lg~~~y~~y~~~~~~~--~~~~l~~~s~l~G~~~a~lW~aqg  111 (156)
T PF05978_consen   43 LAILYGSFAISCLFAPSIVNKLGP---------KWSMILGSLGYAIYIASFFYP--NSYTLYPASALLGFGAALLWTAQG  111 (156)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHhh---------HHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHhhhhHHhhHhhh
Confidence            355556667777888889999994         455555555444443333222  244555666788888886666655


Q ss_pred             hhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc
Q 014698          343 YCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD  381 (420)
Q Consensus       343 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~  381 (420)
                      ..+.+...++.+++..++.-.+.+.+..+|..+.-.+..
T Consensus       112 ~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~  150 (156)
T PF05978_consen  112 TYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ  150 (156)
T ss_pred             HHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            556666677889999999988888888888876655543

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>PRK03612 spermidine synthase; Provisional

Probab=96.99  E-value=0.043  Score=52.33  Aligned_cols=166  Identities=16%  Similarity=0.007  Sum_probs=85.1

Q ss_pred             HHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhH
Q 014698          228 YAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPA  307 (420)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~  307 (420)
                      +..++..++...+.......+...+|.+....+.+.+.+-.+..+|+.+++++.++..++      .-..-+.++++...
T Consensus        21 ~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~------~~~~e~~i~l~~~~   94 (521)
T PRK03612         21 AAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAG------FVAVELLLALLGGL   94 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH------HHHHHHHHHHHHHH
Confidence            344444555555556666666666788888888888888888888888777765332211      00011111111111


Q ss_pred             HHHHHHhhc-C-CCc-HHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc-cC
Q 014698          308 VCMTLSSID-L-GLP-HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD-ST  383 (420)
Q Consensus       308 ~~~~~~~~~-~-~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~-~~  383 (420)
                      ...++.... . ... .......+..++..|...+...- .......++.+...|-......+|+.+|+.+.+.+.- ..
T Consensus        95 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~-~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~l  173 (521)
T PRK03612         95 SALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMR-ILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRL  173 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhc
Confidence            111111100 0 001 11122233445555544333332 2233333346777888889999999999999988764 55


Q ss_pred             CceeeeehhhhHHHHHHH
Q 014698          384 HSWSMSLFAPSIFFYLTG  401 (420)
Q Consensus       384 ~~~~~~~~~~~~~~~~~~  401 (420)
                      |... ..++.+.+.++++
T Consensus       174 G~~~-t~~~~a~l~~~~a  190 (521)
T PRK03612        174 GLIR-TAALTGSLNLLAA  190 (521)
T ss_pred             chHH-HHHHHHHHHHHHH
Confidence            4333 3333344343333

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=96.95  E-value=0.08  Score=48.89  Aligned_cols=176  Identities=12%  Similarity=0.159  Sum_probs=99.8

Q ss_pred             HHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHH-
Q 014698          222 AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT-  300 (420)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~-  300 (420)
                      ..+.+....++..+..-...+-.|.++.+.+.-+..-.+.......+..++..+..|.+.||..|.+.-    |..... 
T Consensus         3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~----~~~l~~Q   78 (432)
T PF06963_consen    3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVI----RTSLVVQ   78 (432)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhH----HHHHHHH
Confidence            445667788888888888888999999998776666666666777778888888899999998765321    111111 


Q ss_pred             -HHHHHhHHHHHHHhhcCCC---cHHHHHHH----HHHHHHhhhhhhhhhhhhh-h-------ccCccchHHHHHHHHHh
Q 014698          301 -IAFLSPAVCMTLSSIDLGL---PHWEIVGI----LTAGLALSSFALSGLYCTH-Q-------DISPEYASILLGITNTV  364 (420)
Q Consensus       301 -~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~g~~~~~~~~~~~~~~~-~-------~~~~~~~g~~~g~~~~~  364 (420)
                       .........+.........   ..+....+    ...+...- .......... .       +-+++...+.++...-+
T Consensus        79 n~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~-Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRI  157 (432)
T PF06963_consen   79 NLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIER-LASIANTIAVERDWVVVIAGGDPGALARMNATMRRI  157 (432)
T ss_pred             HHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHH-HHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHH
Confidence             1122222222211111111   01111111    11121111 1111111111 1       11345566677777777


Q ss_pred             hhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHH
Q 014698          365 GAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTI  403 (420)
Q Consensus       365 ~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~  403 (420)
                      -.+...++|.+.|.+.+.. ++.....+.++..+++...
T Consensus       158 DL~ckllaPl~vG~l~t~~-s~~~~~~~i~~~N~~S~~v  195 (432)
T PF06963_consen  158 DLFCKLLAPLFVGLLMTFA-SPVIAAIFIAGWNLASVFV  195 (432)
T ss_pred             HHHHHHHHHHHHHHHhhcc-CHHHHHHHHHHHHHHHHHH
Confidence            7789999999999999875 5555555555555555443

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]

Probab=96.89  E-value=0.036  Score=49.92  Aligned_cols=269  Identities=14%  Similarity=0.060  Sum_probs=118.6

Q ss_pred             HHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhH---HHhhhc--cchhHHHHHHHH
Q 014698           88 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA---PPIIEN--LGWESVFYIFGL  162 (420)
Q Consensus        88 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~---~~l~~~--~gwr~~f~~~~~  162 (420)
                      +...++.-.+.+.+.+......+...++. |+|.-    .-+.++.+++..+..++-   ....+.  -+=-.-|.+..+
T Consensus       117 f~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~yt----qavm~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~~  191 (406)
T KOG1479|consen  117 FLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSEYT----QAVMSGQALAGTLTSLLRILTKAAFSDSRTSALIYFITSTV  191 (406)
T ss_pred             HHHHHHHHHHHhhhhhhhccchhhhhhcC-CHHHH----HHHHhcchhHhHHHHHHHHHHHHhcCCCCceeehhHHHHHH
Confidence            55667777888888888877777777765 54432    223344444444443332   111111  111222344444


Q ss_pred             HHHHHHHHhhhcccCcccCCCCcC-ccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHh
Q 014698          163 LGIAWFSGFKILQEGETSNGATLA-PRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCL  241 (420)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (420)
                      ..+++.+.+..+|+.|..+..+++ ++++.+..+++.   .++...+....+.++++|+-.-.     .+.....+....
T Consensus       192 ~~llC~i~y~~l~~lpf~~yy~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~i~~k~~~~-----~~~i~lvy~VTL  263 (406)
T KOG1479|consen  192 ILLLCFVLYLVLPKLPFVRYYREKAGSIGSKLAAEGI---ESDSSLSNEDDSLWDIFKKIKDL-----AFNIFLVYFVTL  263 (406)
T ss_pred             HHHHHHHHHHHhhcchHHHHHhhhccccccccccccc---ccccccccccchHHHHHHHHHHH-----hhchheeeeeee
Confidence            455566666666655432111110 000000000000   00000001111344444432111     111222333344


Q ss_pred             hhhhhHhhhhhCCC---cchhhHHHHh-hHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHH---HHHhHHHHHH--
Q 014698          242 SWLPTYFSEELSLN---LTEAAWVSIL-PPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA---FLSPAVCMTL--  312 (420)
Q Consensus       242 ~~~~~~~~~~~g~~---~~~~~~~~~~-~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--  312 (420)
                      ...|-+..+..+-+   ....-+.... ..+...+|.+...+..++-.         |.......   .......+.-  
T Consensus       264 siFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~---------r~l~i~v~lR~lfiPlF~~cn~~  334 (406)
T KOG1479|consen  264 SIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPDP---------RKLTIPVLLRLLFIPLFLLCNYP  334 (406)
T ss_pred             EecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCCC---------ceehHHHHHHHHHHHHHHHhccC
Confidence            56777776643222   2222333334 56667777665555444321         11111111   1111111110  


Q ss_pred             -HhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698          313 -SSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYL  379 (420)
Q Consensus       313 -~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l  379 (420)
                       ......+..+......++|+..|-.....+....+.++++++-.+-.+.......|-+.|. +.+++
T Consensus       335 ~~~v~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~-~~s~l  401 (406)
T KOG1479|consen  335 PLPVVFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGS-LLSWV  401 (406)
T ss_pred             CCCceecCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhh-HHHHH
Confidence             1111234556666667788888866666666666777777766555555554444444444 34443

>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]

Probab=96.55  E-value=0.0081  Score=54.40  Aligned_cols=152  Identities=14%  Similarity=0.084  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHH
Q 014698          221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT  300 (420)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~  300 (420)
                      +.........+...++...-..+.|.|+++. |.+....+.+....-+.+.+.+++.|..+||...|--+    ||..+.
T Consensus        32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~l-Gvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GR----RRPfI~  106 (498)
T KOG0637|consen   32 RKLISVASIAAGVQFGWALELSYLTPYLQSL-GVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGR----RRPFIL  106 (498)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccHHHHHc-CCCcccccccccccccccceeccccccccccccccccc----ccchHH
Confidence            3444455555556677777788999999985 99999999998888899999999999999986433221    444444


Q ss_pred             HHHHHhHHHHHHHhhcC----------CC-cHHHHHHHHHHHH-----HhhhhhhhhhhhhhhccCccchHH-HHHHHHH
Q 014698          301 IAFLSPAVCMTLSSIDL----------GL-PHWEIVGILTAGL-----ALSSFALSGLYCTHQDISPEYASI-LLGITNT  363 (420)
Q Consensus       301 ~~~~~~~~~~~~~~~~~----------~~-~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~~~  363 (420)
                      .......+.+.+.....          .. .....+.++++|+     .......+.-....+...++++.+ +++....
T Consensus       107 ~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~  186 (498)
T KOG0637|consen  107 AGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSF  186 (498)
T ss_pred             HhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHH
Confidence            44444444443332211          11 1112223333333     333445555556666655555555 9999999


Q ss_pred             hhhhhHHHHHHHHH
Q 014698          364 VGAVPGIVGVALTG  377 (420)
Q Consensus       364 ~~~~g~~~~~~~~g  377 (420)
                      +..+|+.+|-.+.+
T Consensus       187 f~avGnvLGY~~g~  200 (498)
T KOG0637|consen  187 FMAVGNVLGYALGS  200 (498)
T ss_pred             HHHhcceeeeeccc
Confidence            99998888776665

>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

Probab=96.51  E-value=0.11  Score=45.46  Aligned_cols=134  Identities=16%  Similarity=0.085  Sum_probs=80.6

Q ss_pred             HHhhhhhhHhhhhhCCCc--chhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhc
Q 014698          239 TCLSWLPTYFSEELSLNL--TEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID  316 (420)
Q Consensus       239 ~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (420)
                      ......+.+..+. +.+.  ...++......+...++.++.|.+.||.|+|       +...  ................
T Consensus        20 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-------~~~~--~~~~~~~~~~~~~~~~   89 (338)
T COG0477          20 LLSPALPLLLSTL-SLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRR-------KVLI--IGLLLFLLGTLLLALA   89 (338)
T ss_pred             hHHHHHHHHHHHc-CCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccch-------HHHH--HHHHHHHHHHHHHHhC
Confidence            3344555555543 4444  4678888888888888889999999999754       2222  2221111111122222


Q ss_pred             CC-CcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCc-cchHHHHHHHHH-hhhhhHHHHHHHHHHHhcc
Q 014698          317 LG-LPHWEIVGILTAGLALSSFALSGLYCTHQDISP-EYASILLGITNT-VGAVPGIVGVALTGYLLDS  382 (420)
Q Consensus       317 ~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~-~~~~g~~~~~~~~g~l~~~  382 (420)
                      .. ............|++.+...+.......+..|+ ++++...+.... ...++..++|.+.+.+.+.
T Consensus        90 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (338)
T COG0477          90 PNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA  158 (338)
T ss_pred             ccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            21 123333333445666665555666666666666 678888888888 5778888888777777655

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=96.40  E-value=0.00056  Score=65.18  Aligned_cols=166  Identities=14%  Similarity=0.179  Sum_probs=2.0

Q ss_pred             HHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh
Q 014698          235 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS  314 (420)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (420)
                      ....++....-+-++++++++..+.|++.+...++.++..++..++.+|..|        .++ +..+.++.++..+++.
T Consensus        16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hr--------prw-ig~g~~~~~~g~~l~~   86 (539)
T PF03137_consen   16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHR--------PRW-IGIGALLMGLGSLLFA   86 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC--------cce-eeecHHHHHHHHHHHh
Confidence            4444555544456677899999999999999999999999888888777542        223 3333333333322221


Q ss_pred             hcC--------------------------------------------C-----CcHHHHHHHHHHHHHhhhhhhhhhhhh
Q 014698          315 IDL--------------------------------------------G-----LPHWEIVGILTAGLALSSFALSGLYCT  345 (420)
Q Consensus       315 ~~~--------------------------------------------~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~  345 (420)
                      .+.                                            .     .....+++-++.|++.....+...+.+
T Consensus        87 lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYi  166 (539)
T PF03137_consen   87 LPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYI  166 (539)
T ss_dssp             -----------------------------------------------------------------SSS------------
T ss_pred             ccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeee
Confidence            100                                            0     001122333566666666666666666


Q ss_pred             hhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc---------------------CCceeeeehhhhHHHHHHHHHH
Q 014698          346 HQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS---------------------THSWSMSLFAPSIFFYLTGTIV  404 (420)
Q Consensus       346 ~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~---------------------~~~~~~~~~~~~~~~~~~~~~~  404 (420)
                      -+.+++++.+...|+..+...+|-++|=.+++...+.                     .|.|-..|++.+...++.++.+
T Consensus       167 DDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl  246 (539)
T PF03137_consen  167 DDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPL  246 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6678889999999999998888888887777766532                     1234455666666555555555


Q ss_pred             hhhcc
Q 014698          405 WLAFA  409 (420)
Q Consensus       405 ~~~~~  409 (420)
                      +.+.+
T Consensus       247 ~~FPk  251 (539)
T PF03137_consen  247 FFFPK  251 (539)
T ss_dssp             -----
T ss_pred             HcCCc
Confidence            55443

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters

Probab=96.33  E-value=0.035  Score=37.86  Aligned_cols=50  Identities=18%  Similarity=0.330  Sum_probs=41.6

Q ss_pred             HHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhh
Q 014698          235 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLI  285 (420)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~  285 (420)
                      .+-+.+...+|...+| .++|..+.+++.+...++..+|.+...++.++..
T Consensus         6 igRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~   55 (85)
T PF06779_consen    6 IGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSR   55 (85)
T ss_pred             hHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            4455667788887776 4999999999999999999999999998887744

Note that many members are hypothetical proteins.

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=96.26  E-value=0.36  Score=45.27  Aligned_cols=150  Identities=11%  Similarity=0.052  Sum_probs=81.7

Q ss_pred             cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCC-----CcchhhHHHHhhHHHHHHH-HHhhhhhhhhhhhcCcchHH
Q 014698          220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSL-----NLTEAAWVSILPPLASVLV-TSIAAQFADNLIATGVETTM  293 (420)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~-~~~~g~l~dr~~~~~~~~~~  293 (420)
                      .|++....+..++..+.++..-.     ++|....     +.+...++.+...+...+. .++.+++++|++++      
T Consensus         6 ~~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~------   74 (472)
T TIGR00769         6 LKKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKE------   74 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH------
Confidence            35666666666666555544433     3454444     3356677766665655555 78889999999875      


Q ss_pred             HHHHHHHHHHHHhHHHHHHHh--hcCCC-------------------------cHHHHHHHHHHHHHhhhhhhh-hhhhh
Q 014698          294 VRKICQTIAFLSPAVCMTLSS--IDLGL-------------------------PHWEIVGILTAGLALSSFALS-GLYCT  345 (420)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~--~~~~~-------------------------~~~~~~~~~~~g~~~~~~~~~-~~~~~  345 (420)
                       +..............+....  ...+.                         ..|......+..-..+..... ..+..
T Consensus        75 -~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~f  153 (472)
T TIGR00769        75 -ALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGF  153 (472)
T ss_pred             -HhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence             22222222221111111111  01110                         011222222222222222222 33333


Q ss_pred             h-hccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc
Q 014698          346 H-QDISPEYASILLGITNTVGAVPGIVGVALTGYLLD  381 (420)
Q Consensus       346 ~-~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~  381 (420)
                      . +...+++..+-.++.....++|..+++.+..++.+
T Consensus       154 andi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~  190 (472)
T TIGR00769       154 ANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK  190 (472)
T ss_pred             HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4 44677889999999999999999999999888773

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=96.05  E-value=0.045  Score=50.09  Aligned_cols=86  Identities=8%  Similarity=0.060  Sum_probs=68.1

Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhhhhhhccCcc---chHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHH
Q 014698          321 HWEIVGILTAGLALSSFALSGLYCTHQDISPE---YASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFF  397 (420)
Q Consensus       321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~  397 (420)
                      ....+++.+++++.|..=+.......+.++++   ++.+.........++|+.+++.+.+++.++. +|...|.+.++..
T Consensus        34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~-~~~~~f~i~~~~~  112 (372)
T PF00854_consen   34 GLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNY-GWFLGFGIPAIGM  112 (372)
T ss_dssp             CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS--HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhcccc-chhhhhhHHHHHH
Confidence            45677778889999988888888888887654   5778888889999999999999999999886 8888898887766


Q ss_pred             HHHHHHHhhh
Q 014698          398 YLTGTIVWLA  407 (420)
Q Consensus       398 ~~~~~~~~~~  407 (420)
                      +++.+..+.-
T Consensus       113 ~~~~~~f~~~  122 (372)
T PF00854_consen  113 LLALIVFLSG  122 (372)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHHHhC
Confidence            6655544433

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.80  E-value=0.032  Score=54.24  Aligned_cols=163  Identities=10%  Similarity=0.175  Sum_probs=104.2

Q ss_pred             HHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhc--
Q 014698          239 TCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID--  316 (420)
Q Consensus       239 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  316 (420)
                      ++....-+-+++.++++..+.|++.+..-++..+...+..+...|..|.         ..+..+.+..++..++..++  
T Consensus       114 ~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrP---------r~Ig~G~~~m~lgsll~alPHf  184 (735)
T KOG3626|consen  114 GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRP---------RWIGIGLVLMGLGSLLFALPHF  184 (735)
T ss_pred             hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCcc---------ceeeechhHHHHHHHHHhChHH
Confidence            5555555667788999999999999999999998888888887777643         22222222222222221110  


Q ss_pred             ------------------C---------------------------C-Cc-H--HHHHHHHHHHHHhhhhhhhhhhhhhh
Q 014698          317 ------------------L---------------------------G-LP-H--WEIVGILTAGLALSSFALSGLYCTHQ  347 (420)
Q Consensus       317 ------------------~---------------------------~-~~-~--~~~~~~~~~g~~~~~~~~~~~~~~~~  347 (420)
                                        .                           . +. .  .++++.++.|++.....+...+.+-+
T Consensus       185 ~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDD  264 (735)
T KOG3626|consen  185 FSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDD  264 (735)
T ss_pred             hcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccc
Confidence                              0                           0 00 1  22333466677766666666666656


Q ss_pred             ccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC------------------CceeeeehhhhHHHHHHHHHHhhhcc
Q 014698          348 DISPEYASILLGITNTVGAVPGIVGVALTGYLLDST------------------HSWSMSLFAPSIFFYLTGTIVWLAFA  409 (420)
Q Consensus       348 ~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (420)
                      .+.+++.....|+..++..+|-++|=.+++.+...+                  |.|-..|++.+.+.++..+.++++.+
T Consensus       265 nvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk  344 (735)
T KOG3626|consen  265 NVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPK  344 (735)
T ss_pred             cccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence            677888999999999999888888888888776422                  22344566666666666666655554


Q ss_pred             C
Q 014698          410 S  410 (420)
Q Consensus       410 ~  410 (420)
                      +
T Consensus       345 ~  345 (735)
T KOG3626|consen  345 E  345 (735)
T ss_pred             c
Confidence            3

>COG3202 ATP/ADP translocase [Energy production and conversion]

Probab=95.01  E-value=3  Score=38.83  Aligned_cols=225  Identities=11%  Similarity=-0.008  Sum_probs=118.4

Q ss_pred             hhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhh--------ch-----------------------HHHHHHHHHHHHh
Q 014698           52 LLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLA--------GF-----------------------MPGLVLSRVLVGI  100 (420)
Q Consensus        52 l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--------~~-----------------------~~~l~~~r~l~G~  100 (420)
                      .+..-++++.-+++++-.-+..+....+++++.-        ++                       .|...+.-.+.=+
T Consensus        80 ~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aEL  159 (509)
T COG3202          80 IIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAEL  159 (509)
T ss_pred             HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHH
Confidence            3333446666688887777777666666665421        11                       0222222222222


Q ss_pred             ccccchh-hhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhcc-c---------hhHHHHHHHHHHHHHHH
Q 014698          101 GEGVSPS-AATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-G---------WESVFYIFGLLGIAWFS  169 (420)
Q Consensus       101 ~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-g---------wr~~f~~~~~~~~~~~~  169 (420)
                      =.+.... .-.....|.+..+|-.|..+.++.+.+++..++..+..++.++- .         -+..+.+.+..++++..
T Consensus       160 WgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~  239 (509)
T COG3202         160 WGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAIL  239 (509)
T ss_pred             HHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2222222 23456788888899999999999999999999998888887621 1         33444555555555555


Q ss_pred             HhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhh
Q 014698          170 GFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFS  249 (420)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (420)
                      +..++.+.-.+.+.-..+..+         +..++..+..-..+++.+.|+|.++...+...+++.+...+....-.-.+
T Consensus       240 l~~~~~r~il~~~~f~~~~~~---------kk~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik  310 (509)
T COG3202         240 LYRYINRNVLTDPLFYLRAKK---------KKKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIK  310 (509)
T ss_pred             HHHHHHhhcccCcchhHHHhc---------ccccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence            555443322111110000000         00000000011123556778888888888877777776665543322333


Q ss_pred             hhhCCCcchh---hHHHHhhHHH-HHHHHHhhhhhhhhhh
Q 014698          250 EELSLNLTEA---AWVSILPPLA-SVLVTSIAAQFADNLI  285 (420)
Q Consensus       250 ~~~g~~~~~~---~~~~~~~~~~-~~~~~~~~g~l~dr~~  285 (420)
                      +.+..+.+..   |.+....++. .++...+++.+.+|.|
T Consensus       311 ~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~G  350 (509)
T COG3202         311 ELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVG  350 (509)
T ss_pred             HhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhh
Confidence            3333333322   3333444444 3444556778888877

>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]

Probab=94.78  E-value=0.25  Score=41.82  Aligned_cols=158  Identities=11%  Similarity=0.080  Sum_probs=79.9

Q ss_pred             HhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHH
Q 014698          247 YFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVG  326 (420)
Q Consensus       247 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (420)
                      |+-+.+|+...++|.++.......++...+.|-+.||.||||       .-.  ...+....+.+ .-..++ .....+.
T Consensus        62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKr-------acv--tycitYiLsCi-TKhSpq-YkVLmVG  130 (454)
T KOG4332|consen   62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKR-------ACV--TYCITYILSCI-TKHSPQ-YKVLMVG  130 (454)
T ss_pred             eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhcccc-------cee--eehHHHHHHHH-hhcCCc-eEEEeeh
Confidence            444567898999998877766677777788899999999863       211  11111111111 111111 1222333


Q ss_pred             HHHHHHHhhhhhhhhh-hhhhhcc-----CccchHHHHHHHH-HhhhhhHHHHHHHHHHHhccCC-ceeeeehhhhHHHH
Q 014698          327 ILTAGLALSSFALSGL-YCTHQDI-----SPEYASILLGITN-TVGAVPGIVGVALTGYLLDSTH-SWSMSLFAPSIFFY  398 (420)
Q Consensus       327 ~~~~g~~~~~~~~~~~-~~~~~~~-----~~~~~g~~~g~~~-~~~~~g~~~~~~~~g~l~~~~~-~~~~~~~~~~~~~~  398 (420)
                      =.+-|+.........- +.+.+..     +.+-.....+=.. ....+-.+++...+-.+.|+.+ +.-.+|-..+.+..
T Consensus       131 R~LGGiaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLa  210 (454)
T KOG4332|consen  131 RVLGGIATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLA  210 (454)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHH
Confidence            3444444443332222 2233322     2222222222222 2233555566666666677653 45567777666666


Q ss_pred             HHHHHHhhhccCCCCCC
Q 014698          399 LTGTIVWLAFASSKPQN  415 (420)
Q Consensus       399 ~~~~~~~~~~~~~~~~~  415 (420)
                      ++..+.+--+.++-+++
T Consensus       211 igmAvil~~W~ENygdp  227 (454)
T KOG4332|consen  211 IGMAVILSSWSENYGDP  227 (454)
T ss_pred             HHHHHHHhhhhhccCCh
Confidence            66555555555554443

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=94.69  E-value=0.16  Score=46.23  Aligned_cols=64  Identities=20%  Similarity=0.125  Sum_probs=58.7

Q ss_pred             hchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhh
Q 014698           85 AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII  148 (420)
Q Consensus        85 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~  148 (420)
                      .++.|..++.-+..|+..|..++.....+.|-.|+++|..++|..+.+-+.|..++..++-.+-
T Consensus       332 ipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le  395 (402)
T PF02487_consen  332 IPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE  395 (402)
T ss_pred             hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            5788889999999999999999999999999999999999999999999999999998886554

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs

Probab=93.91  E-value=0.017  Score=51.19  Aligned_cols=56  Identities=16%  Similarity=0.252  Sum_probs=2.9

Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHH
Q 014698          321 HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALT  376 (420)
Q Consensus       321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~  376 (420)
                      .+.++..+++|+..|-.....+....+.+++++|..+-.+.......|-.+|..+.
T Consensus       249 ~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls  304 (309)
T PF01733_consen  249 AWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS  304 (309)
T ss_dssp             ------------------HHHH----------------------------------
T ss_pred             HHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44455567788888877777777777778888888887777777777777766543

Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.

>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]

Probab=93.63  E-value=0.97  Score=40.55  Aligned_cols=145  Identities=11%  Similarity=0.019  Sum_probs=71.0

Q ss_pred             HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhh-----hhhhcCcchHHHH
Q 014698          221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFAD-----NLIATGVETTMVR  295 (420)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r~~~~~~~~~~~~  295 (420)
                      +++..+...+..+....... ..+|.+++.. |.|-.+.+.......--  ---+++..+.|     |+|||       |
T Consensus        31 ~~illLl~LYllQGiP~GL~-~~iP~lL~ak-~vSyt~~a~fS~ay~P~--sLKllWaPiVDs~y~k~~Grr-------k   99 (510)
T KOG3574|consen   31 SSILLLLFLYLLQGIPLGLI-GAIPLLLQAK-GVSYTSQAIFSFAYWPF--SLKLLWAPIVDSVYSKRFGRR-------K   99 (510)
T ss_pred             hhHHHHHHHHHHcCCchhHh-hhhHHHhcCC-CcchhhhhhhhhhhhHH--HHHHHHHhhhHHHHHHhhccc-------c
Confidence            45556666666655555444 4889888853 77776666554332211  12345667777     99987       4


Q ss_pred             HHHHHHHHHHhHHHHHHHhhcC-------CCcHHHHH--HHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhh
Q 014698          296 KICQTIAFLSPAVCMTLSSIDL-------GLPHWEIV--GILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGA  366 (420)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~  366 (420)
                      .++.-.-..+...+..+.....       ..+...+.  .+++.-+....--...--...+...+++-|-++........
T Consensus       100 sWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~  179 (510)
T KOG3574|consen  100 SWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQT  179 (510)
T ss_pred             ceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHh
Confidence            4444344444444443332211       11111111  11222222221122222223344667776666666555556


Q ss_pred             hhHHHHHHHH
Q 014698          367 VPGIVGVALT  376 (420)
Q Consensus       367 ~g~~~~~~~~  376 (420)
                      .|.+++..++
T Consensus       180 ~GyfL~~~if  189 (510)
T KOG3574|consen  180 AGYFLGNVVF  189 (510)
T ss_pred             hhHHhhccee
Confidence            6666665444

>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]

Probab=93.00  E-value=4.8  Score=39.06  Aligned_cols=174  Identities=15%  Similarity=0.094  Sum_probs=106.2

Q ss_pred             HHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHH
Q 014698          223 VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA  302 (420)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~  302 (420)
                      .......-.+...++++....+-.|+.+.++.+...+.-.............+.+++++|-+-.        |-..+.++
T Consensus        39 ~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~g--------ry~tI~~~  110 (571)
T KOG1237|consen   39 APFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLG--------RYFTINIG  110 (571)
T ss_pred             HHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhH--------HHHHHHHH
Confidence            3334445556667777777888888888888888777666666666677777889999998754        33333333


Q ss_pred             HHHhHHHHHHHh-------hcC-------C-----C-c----HHHHHHHHHHHHHhhhhhhhhhhhhhhccC---c-cc-
Q 014698          303 FLSPAVCMTLSS-------IDL-------G-----L-P----HWEIVGILTAGLALSSFALSGLYCTHQDIS---P-EY-  353 (420)
Q Consensus       303 ~~~~~~~~~~~~-------~~~-------~-----~-~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~-~~-  353 (420)
                      .++...+..+..       ..+       .     . .    ......+-...++.++.-+.....-.+.++   + +. 
T Consensus       111 s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~  190 (571)
T KOG1237|consen  111 SLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVK  190 (571)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhh
Confidence            222222211110       000       0     0 0    122333344455666556666665556565   2 22 


Q ss_pred             -hHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHh
Q 014698          354 -ASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVW  405 (420)
Q Consensus       354 -~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (420)
                       ...-+.......+.|..++..+.-++-|.. +|...|-+..+...++.++.+
T Consensus       191 ~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~-~w~lgf~i~~~~~~lai~iF~  242 (571)
T KOG1237|consen  191 GIPSFFNWFYFSQNGGALLAQTVLVYIQDNV-GWKLGFGIPTVLNALAILIFL  242 (571)
T ss_pred             CcccchhHHHHHHHHHHHHHHHHHHhhhhcc-cceeeccHHHHHHHHHHHHHH
Confidence             336667777778888888888888887774 899999888776666655443

>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]

Probab=91.83  E-value=9.6  Score=34.86  Aligned_cols=63  Identities=6%  Similarity=-0.101  Sum_probs=30.2

Q ss_pred             HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhh
Q 014698          221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLI  285 (420)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~  285 (420)
                      -.++...+...........+.+-.+.|-++..+.++  .-.......+.+.+...+...+-.|..
T Consensus        18 ~v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~   80 (406)
T KOG1479|consen   18 LVYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLN   80 (406)
T ss_pred             cHHHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334444444444555566666666666555444444  333334444444444444444444433

>KOG3098 consensus Uncharacterized conserved protein [Function unknown]

Probab=88.90  E-value=12  Score=35.01  Aligned_cols=111  Identities=11%  Similarity=-0.062  Sum_probs=75.9

Q ss_pred             hhHH-HHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhh
Q 014698          259 AAWV-SILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSF  337 (420)
Q Consensus       259 ~~~~-~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  337 (420)
                      +|+. .++......+..++.+.+.|+++         .|+.+..+...-......+...  +.+..+..-.+.|++.+..
T Consensus        51 aGy~~~aiiY~~ftv~~l~~psiv~~i~---------~K~~lv~ga~~y~~f~~gfl~~--N~y~~yfssallG~Gaall  119 (461)
T KOG3098|consen   51 AGYYGQAIIYAFFTVSCLFAPSIVNFLG---------PKWALVIGATCYAAFPLGFLFP--NSYYLYFSSALLGFGAALL  119 (461)
T ss_pred             ccHHHHHHHHHHHHHHHHhhHHHHHHhh---------HHHHHHHHhHHHHHHHHHHHhc--chHHHHHHHHHhhhhHHhe
Confidence            4444 56677777888899999999999         4466666655555444433332  2556666678888888855


Q ss_pred             hhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHh
Q 014698          338 ALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL  380 (420)
Q Consensus       338 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~  380 (420)
                      ....-....+...++.+.+..++.-.+...+..+|..+.-.+.
T Consensus       120 w~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~  162 (461)
T KOG3098|consen  120 WTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFIYF  162 (461)
T ss_pred             ecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhheeee
Confidence            5555555566667788889999988888888877766554443

>PRK03612 spermidine synthase; Provisional

Probab=87.91  E-value=13  Score=35.87  Aligned_cols=70  Identities=19%  Similarity=0.226  Sum_probs=47.0

Q ss_pred             HHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhh-hccchhHHHHHHHH
Q 014698           92 VLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII-ENLGWESVFYIFGL  162 (420)
Q Consensus        92 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~-~~~gwr~~f~~~~~  162 (420)
                      ...-++.++..|...|....+..+.. .++-++..|.......+|.++|.++.+++. ..+|-....++.+.
T Consensus       114 ~~~~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~  184 (521)
T PRK03612        114 YVLVLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGS  184 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence            34455677777888888777666543 234567788999999999999999887655 35564433333333

>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]

Probab=87.43  E-value=3  Score=36.35  Aligned_cols=77  Identities=22%  Similarity=0.082  Sum_probs=61.9

Q ss_pred             HHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHh
Q 014698           70 GVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI  147 (420)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l  147 (420)
                      -.+++.+......+ .++++...+.-+.-|+-.|..++...--+.+-.++++|-.+++....+-++|..++..++-.+
T Consensus       325 vNl~ff~~~a~~~f-tpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl  401 (409)
T KOG3880|consen  325 VNLLFFLLQAWYWF-TPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL  401 (409)
T ss_pred             HHHHHHHHHHHHHh-ccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence            34444555555554 889999999999999888888888888888888899999999999999999998888776433

>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]

Probab=86.98  E-value=5.1  Score=36.03  Aligned_cols=41  Identities=12%  Similarity=0.247  Sum_probs=29.5

Q ss_pred             HhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHH
Q 014698          333 ALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGV  373 (420)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~  373 (420)
                      +.-.+-.......++.+|.++|..+.|+.|.....-..+.-
T Consensus       399 GLW~fDlAVtqimQe~VpEseR~vv~gvqnsL~~~ldll~~  439 (503)
T KOG2601|consen  399 GLWMFDLAVTQIMQETVPESERCVVFGVQNSLNSALDLLKD  439 (503)
T ss_pred             hHHhccHHHHHHHHHhcchhhhhhhHhHHHHHHHHHHHHHH
Confidence            33344455556666778999999999999998887655543

>KOG3097 consensus Predicted membrane protein [Function unknown]

Probab=86.97  E-value=22  Score=31.64  Aligned_cols=66  Identities=14%  Similarity=0.075  Sum_probs=48.0

Q ss_pred             HhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcC
Q 014698           50 LELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSI  117 (420)
Q Consensus        50 ~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~  117 (420)
                      ..++.+.+..+.|.|.++.++.......-...  .-+.+..++-.....|++.+..+..--+|+++.-
T Consensus        74 s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N--l~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g  139 (390)
T KOG3097|consen   74 SSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN--LEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG  139 (390)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh--cchhHHhhccHHHhhccccccccccCcceecHHH
Confidence            34555555667778888888887776544322  3567888999999999999998887777766554

>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters

Probab=85.67  E-value=2.1  Score=29.30  Aligned_cols=56  Identities=21%  Similarity=0.122  Sum_probs=42.8

Q ss_pred             cccccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHH
Q 014698           35 RIGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGL   91 (420)
Q Consensus        35 ~~g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l   91 (420)
                      .-|..++....++.+|++....+.++..+++.+..+.+...+....+++ .++++..
T Consensus        28 ~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~-~~~~~~w   83 (85)
T PF06779_consen   28 QAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMAL-THSFWLW   83 (85)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH-HhchHHH
Confidence            3455556666677778888887777777889999999999999999986 6665543

Note that many members are hypothetical proteins.

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=85.50  E-value=22  Score=30.35  Aligned_cols=24  Identities=8%  Similarity=-0.180  Sum_probs=14.3

Q ss_pred             HHHHHhHHHHHHHhhhhhhHhhhh
Q 014698          228 YAHFCGSWGHYTCLSWLPTYFSEE  251 (420)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~  251 (420)
                      +.........++....=..|++++
T Consensus       185 ~~LAv~aGvlyGs~fvPv~Yi~~~  208 (254)
T PF07857_consen  185 IILAVFAGVLYGSNFVPVIYIQDH  208 (254)
T ss_pred             HHHHHHHHHHHhcccchHHHHHhC
Confidence            333444556667666666777765

The region concerned is approximately 280 residues long.

>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]

Probab=84.69  E-value=26  Score=31.84  Aligned_cols=69  Identities=14%  Similarity=0.163  Sum_probs=45.7

Q ss_pred             HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCc
Q 014698          221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV  289 (420)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~  289 (420)
                      +....+...++...++--...+....|+.+..|-+....+.....-+....+...+.|...|+..|.|.
T Consensus        27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kv   95 (503)
T KOG2601|consen   27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKV   95 (503)
T ss_pred             ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHH
Confidence            334445556666666666666677777777666555555555556666666777778888899887643

>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter

Probab=81.49  E-value=25  Score=33.92  Aligned_cols=24  Identities=17%  Similarity=0.200  Sum_probs=11.5

Q ss_pred             hhHHHHHHHHHhhhhhhhhhhhcC
Q 014698          265 LPPLASVLVTSIAAQFADNLIATG  288 (420)
Q Consensus       265 ~~~~~~~~~~~~~g~l~dr~~~~~  288 (420)
                      ...+.+.++...++++-..++.++
T Consensus       305 ~y~~~~~iaGy~S~~~yk~~~g~~  328 (521)
T PF02990_consen  305 LYALTSFIAGYVSARLYKSFGGKK  328 (521)
T ss_pred             HHHHHhhHHHHHHHHHHHHcCCCc
Confidence            334444444455555555555443

Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane

>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised

Probab=80.06  E-value=24  Score=27.85  Aligned_cols=63  Identities=11%  Similarity=0.066  Sum_probs=38.4

Q ss_pred             hcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhcc------chhHHHHHHHHHHHHHHHHhhhcccC
Q 014698          115 RSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL------GWESVFYIFGLLGIAWFSGFKILQEG  177 (420)
Q Consensus       115 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------gwr~~f~~~~~~~~~~~~~~~~~~~~  177 (420)
                      ..+|.+++.+..+.+.++.-.+...--.+=+.+....      .+...+++.++.+.+.+++.-.++++
T Consensus        13 ~~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~V~~~   81 (166)
T PF05255_consen   13 PWFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNSVSKS   81 (166)
T ss_pred             CCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhccccHH
Confidence            3455566667776666655555444444444444322      47778888888888876665555543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	420
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	3e-35

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451

 Score =  134 bits (339), Expect = 3e-35
 Identities = 56/351 (15%), Positives = 115/351 (32%), Gaps = 18/351 (5%)

Query: 64  RKVLQTGVLIWSLATALLPLLAGF---MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE 120
           R  L  G+++ +     +  +      +  + +   L G  +G+        +      +
Sbjct: 92  RVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQK 151

Query: 121 ERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIFGLLGIAW-FSGFKILQEGE 178
           ER   VS      + G     LL    +     W +  Y+     I      F ++++  
Sbjct: 152 ERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTP 211

Query: 179 TSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHY 238
            S G                  + +E+  + K +  + +  +K +W +  A+       Y
Sbjct: 212 QSCGLPPIEEYKNDYPDDYNEKAEQEL--TAKQIFMQYVLPNKLLWYIAIANVFVYLLRY 269

Query: 239 TCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKIC 298
             L W PTY  E     L +++W   L   A +  T +    +D +       T V  + 
Sbjct: 270 GILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMT 329

Query: 299 QTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTH-QDISP-EYASI 356
                      +       G P  +++ ++  G  +  +    L   H  +++P + A  
Sbjct: 330 LVTIAT-----IVYWMNPAGNPTVDMICMIVIGFLI--YGPVMLIGLHALELAPKKAAGT 382

Query: 357 LLGITNTVGAVPG-IVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWL 406
             G T   G + G +   A+ GY +D    W            L   ++ +
Sbjct: 383 AAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVILLIV 432

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	420
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	100.0
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	100.0
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	100.0
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	100.0
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	99.98
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.95
2xut_A	524	Proton/peptide symporter family protein; transport	99.95
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	99.56
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	99.55
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	99.51
2xut_A	524	Proton/peptide symporter family protein; transport	99.49
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	99.37
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.26
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	98.71

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=100.00  E-value=1.6e-36  Score=283.62  Aligned_cols=358  Identities=14%  Similarity=0.153  Sum_probs=270.7

Q ss_pred             chhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh---hchHHHHHHHHHHHHhccccchhhhHHHHHhc
Q 014698           40 GRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL---AGFMPGLVLSRVLVGIGEGVSPSAATDLIARS  116 (420)
Q Consensus        40 ~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~  116 (420)
                      .........++.++.+++.||++||+++..+.++.+++.+++++.   +++++.++++|+++|++.+...+...+++.|+
T Consensus        68 ~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~  147 (451)
T 1pw4_A           68 LSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHW  147 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhccccHHHHHHHHHHHHHHhhhccchHHHHHHHH
Confidence            334444455568888888999999999999999999999888632   78899999999999999999999999999999


Q ss_pred             CCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccc-hhHHHHHHHHHHHHHH-HHhhhcccCcccCCCCcCccchhhhh
Q 014698          117 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYIFGLLGIAWF-SGFKILQEGETSNGATLAPRSNYINM  194 (420)
Q Consensus       117 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (420)
                      +|+++|++++++.+.+.++|.+++|.+++.+.+..| ||+.|++.+++.++.. +..+.+||++++.+.++.++.+.. .
T Consensus       148 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  226 (451)
T 1pw4_A          148 WSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKND-Y  226 (451)
T ss_dssp             CTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCSCTTTCCC--
T ss_pred             CCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhccCCHhhcCCCChhhhccc-c
Confidence            999999999999999999999999999999888888 9999999998887654 455667776554322211111100 0


Q ss_pred             hhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHH
Q 014698          195 KKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVT  274 (420)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  274 (420)
                      +++. +..++.+...++...++++|+|.++...+..++.....+....+.|.|+++.+|.++.+.+...+...++.+++.
T Consensus       227 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  305 (451)
T 1pw4_A          227 PDDY-NEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGT  305 (451)
T ss_dssp             -------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccc-hhhhhcccccccchHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence            0000 000000111111124678889999999999999999999999999999999889999999999999999999999


Q ss_pred             Hhhhhhhhhh--hhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCC-CcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCc
Q 014698          275 SIAAQFADNL--IATGVETTMVRKICQTIAFLSPAVCMTLSSIDLG-LPHWEIVGILTAGLALSSFALSGLYCTHQDISP  351 (420)
Q Consensus       275 ~~~g~l~dr~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  351 (420)
                      ++.+++.||+  ++        |+.......+...++..+.....+ +........++.|++.+...+.......+..|+
T Consensus       306 ~~~g~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  377 (451)
T 1pw4_A          306 LLCGWMSDKVFRGN--------RGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPK  377 (451)
T ss_dssp             HHHHHHHHHTSTTC--------HHHHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHhcCC--------chhHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHhchHHHHHHHHHHHhch
Confidence            9999999998  75        333333333333244444333332 334444555667777766666666677788899


Q ss_pred             cchHHHHHHHHHhhhh-hHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhc
Q 014698          352 EYASILLGITNTVGAV-PGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAF  408 (420)
Q Consensus       352 ~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (420)
                      ++|+++.|+.+...++ |..++|.+.|.+.|.. ++...|.+.+++.+++.++.+...
T Consensus       378 ~~~g~~~~~~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~  434 (451)
T 1pw4_A          378 KAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-GWDGGFMVMIGGSILAVILLIVVM  434 (451)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS-CSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999 9999999999999986 688788887776666665555443

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=100.00  E-value=2.7e-33  Score=260.70  Aligned_cols=337  Identities=12%  Similarity=0.093  Sum_probs=255.7

Q ss_pred             hhhhhccccccchhhh---hHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHH---HHhhchHHHHHHHHHHHHhcc
Q 014698           29 KKWVGLRIGRRGRIYL---KDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALL---PLLAGFMPGLVLSRVLVGIGE  102 (420)
Q Consensus        29 ~~~l~~~~g~~~~l~~---~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~r~l~G~~~  102 (420)
                      ..+++.+..+.+.+..   ....++.++.+++.||+||||++..+.++.+++.++.   +. +++++.++++|+++|++.
T Consensus        53 ~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~G~~~  131 (438)
T 3o7q_A           53 QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAE-IMNYTLFLVGLFIIAAGL  131 (438)
T ss_dssp             HHHSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHHHHHHhccc-cccHHHHHHHHHHHHhhH
Confidence            3444444444443333   3444567888888999999999999999999999988   65 899999999999999999


Q ss_pred             ccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhh-hccc-------------------------hhHH
Q 014698          103 GVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII-ENLG-------------------------WESV  156 (420)
Q Consensus       103 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~-~~~g-------------------------wr~~  156 (420)
                      +...+...++++|++|+|+|++++++.+.+.++|..++|.+++.+. +..+                         ||+.
T Consensus       132 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~  211 (438)
T 3o7q_A          132 GCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTP  211 (438)
T ss_dssp             HHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHHHTSSCCCCHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHhhhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCcchhhhhhhhhhhhHHHH
Confidence            9999999999999999999999999999999999999999999988 5544                         9999


Q ss_pred             HHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHH
Q 014698          157 FYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWG  236 (420)
Q Consensus       157 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (420)
                      |++.++..++..+..++.++++.+++++++++                  ++..+.++++++|+|.++...+..++....
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (438)
T 3o7q_A          212 YMIIVAIVLLVALLIMLTKFPALQSDNHSDAK------------------QGSFSASLSRLARIRHWRWAVLAQFCYVGA  273 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCCCCTTTCCCCSS------------------TTSHHHHHHHHTTCSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCCccccccccccc------------------ccchhhhHHHHHhChHHHHHHHHHHHHHHH
Confidence            98888777665544444332221111111000                  011122356888999999999998988888


Q ss_pred             HHHHhhhhhhH-hhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhh
Q 014698          237 HYTCLSWLPTY-FSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI  315 (420)
Q Consensus       237 ~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (420)
                      ......+.|.| +++.+|.++.+++...+...++.+++.++.+++.||+++|         .....+.....+...+...
T Consensus       274 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~---------~~~~~~~~~~~~~~~~~~~  344 (438)
T 3o7q_A          274 QTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPH---------KVLAAYALIAMALCLISAF  344 (438)
T ss_dssp             HHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHH---------HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcch---------HHHHHHHHHHHHHHHHHHH
Confidence            88999999999 8888899999999999999999999999999999999863         3333343444444444333


Q ss_pred             cCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhH
Q 014698          316 DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSI  395 (420)
Q Consensus       316 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~  395 (420)
                      ..  ........++.+++.+...+.......+..|++ ++++.++.. ...+|+.++|.+.|.+.|..|+++..|.+.++
T Consensus       345 ~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~  420 (438)
T 3o7q_A          345 AG--GHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPAL  420 (438)
T ss_dssp             CC--HHHHHHHHHHHHHHHTTHHHHHHHHHHSSCGGG-HHHHHHHHH-HTTHHHHHHHHHHHHHHHHHTSSGGGGHHHHH
T ss_pred             cC--CcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-ccchhhHHH-HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence            32  333444456677777766666666667777765 888888877 67799999999999999997658878877544


Q ss_pred             HH
Q 014698          396 FF  397 (420)
Q Consensus       396 ~~  397 (420)
                      +.
T Consensus       421 ~~  422 (438)
T 3o7q_A          421 CF  422 (438)
T ss_dssp             HH
T ss_pred             HH
Confidence            33

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=100.00  E-value=3e-32  Score=257.43  Aligned_cols=369  Identities=14%  Similarity=0.064  Sum_probs=250.8

Q ss_pred             chhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHH-----------------hhchHHHHHHHHHHHHhcc
Q 014698           40 GRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPL-----------------LAGFMPGLVLSRVLVGIGE  102 (420)
Q Consensus        40 ~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~l~~~r~l~G~~~  102 (420)
                      ...+..+..+|+++.+++.||+|||+++.++.+++.++++++++                 +++|++.++++|+++|++.
T Consensus        61 ~s~~~~G~~iG~~~~G~laDr~GRk~~l~~~~~l~~i~~i~~a~~~~~~~~~~~~~~~~~~~a~~~~~l~~~R~l~G~g~  140 (491)
T 4gc0_A           61 VASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGV  140 (491)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHCTTTTTSCSSSSSSCCGGGGGCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHhhhHHHHHHHHHHHHHHH
Confidence            34455667778999999999999999999999999999998873                 3789999999999999999


Q ss_pred             ccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhc--------cchhHHHHHHHHHHHHHHHHhhhc
Q 014698          103 GVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN--------LGWESVFYIFGLLGIAWFSGFKIL  174 (420)
Q Consensus       103 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~--------~gwr~~f~~~~~~~~~~~~~~~~~  174 (420)
                      |...+....+++|+.|+++|++..+..+.+...|.++++.++..+...        .+||..+.+..++.++..+..++.
T Consensus       141 G~~~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (491)
T 4gc0_A          141 GLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTV  220 (491)
T ss_dssp             HHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTTTTHHHHHHHTTHHHHHHHHHHGGGS
T ss_pred             HHHHHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhccccccccccchhhHHHhhhhhhhhhhhhhhhhcC
Confidence            999999999999999999999999999999999999999988776542        358888888888888888888999


Q ss_pred             ccCcccCCCCcCccchhhhhhhhhh-----hh----hhhhcccccccchhhhhhcHHHHHHHHHHHHh-HHHHHHHhhhh
Q 014698          175 QEGETSNGATLAPRSNYINMKKSLS-----AS----LEEMGESLKDVPWKAIFRSKAVWAMIYAHFCG-SWGHYTCLSWL  244 (420)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  244 (420)
                      ||+|++...+.++++.....++...     ++    .++..+..+.......++.++.........+. ..+.+....+.
T Consensus       221 peSp~~L~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (491)
T 4gc0_A          221 PESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYA  300 (491)
T ss_dssp             CCCHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHSCCTHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred             CCChHHHHHcCchhHHHHhHHHhcCCchhHHHHHHHHHHHHhhhhhhhHHHHhcccHHHHHHHHHHHHHHhhhhHHHhcc
Confidence            9998765444333322111111000     00    00001111111122333344444443333333 33444555566


Q ss_pred             hhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHH--HHHhhcCCCcHH
Q 014698          245 PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCM--TLSSIDLGLPHW  322 (420)
Q Consensus       245 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  322 (420)
                      |.+.++ .+.+...........++...++.++.+++.||+|||       +... ...........  ............
T Consensus       301 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr-------~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~  371 (491)
T 4gc0_A          301 PEVFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRK-------PLQI-IGALGMAIGMFSLGTAFYTQAPGIV  371 (491)
T ss_dssp             HHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSH-------HHHH-HHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred             hHHHHh-cCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCc-------chhc-cchHHHHHHHHHHHHHHhcccchHH
Confidence            666655 477777777777888889999999999999999975       2222 22211111111  111222222222


Q ss_pred             HHHHHHHHHHHhhhh-hhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC-----CceeeeehhhhHH
Q 014698          323 EIVGILTAGLALSSF-ALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST-----HSWSMSLFAPSIF  396 (420)
Q Consensus       323 ~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-----~~~~~~~~~~~~~  396 (420)
                      ......+...+.+.. .+.......|.+|++.|+++.|+.+...++++.+++.+.+.+.+..     .+....|++.+++
T Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~~~~~~~~~~~~~~~i~~~~  451 (491)
T 4gc0_A          372 ALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCM  451 (491)
T ss_dssp             HHHHHHHHHHHHHTTTTHHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHHHHHHHHHTTCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Confidence            233333333333322 2333345567789999999999999999999999999887765431     1344467777788


Q ss_pred             HHHHHHHHhhhccCCCCCCCC
Q 014698          397 FYLTGTIVWLAFASSKPQNFS  417 (420)
Q Consensus       397 ~~~~~~~~~~~~~~~~~~~~~  417 (420)
                      ++++.++.+++.+|+|+++.|
T Consensus       452 ~~~~~i~~~~~~PETkg~tLe  472 (491)
T 4gc0_A          452 GVLAALFMWKFVPETKGKTLE  472 (491)
T ss_dssp             HHHHHHHHHHHCCCCTTCCHH
T ss_pred             HHHHHHHHHheecCCCCCCHH
Confidence            888888888889999887654

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=100.00  E-value=1.8e-31  Score=252.05  Aligned_cols=365  Identities=14%  Similarity=0.056  Sum_probs=246.8

Q ss_pred             hhhhhHHhHHhhhhcchhhh-cchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCc
Q 014698           41 RIYLKDTNLLELLRLPLLFV-TWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL  119 (420)
Q Consensus        41 ~l~~~~~~~~~l~~~p~~~~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~  119 (420)
                      ..+.....++.++.+++.|| +|||+++..+.++..++.+++++ ++|++.++++|+++|++.+...+...++++|++|+
T Consensus        61 ~~~~~~~~~~~~~~g~l~dr~~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~  139 (491)
T 4aps_A           61 AIYASMVYLSGTIGGFVADRIIGARPAVFWGGVLIMLGHIVLAL-PFGASALFGSIILIIIGTGFLKPNVSTLVGTLYDE  139 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHS-CCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred             HHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHhccchHHHHHHHHcCc
Confidence            34444455568888889999 89999999999999999998886 89999999999999999999999999999999999


Q ss_pred             cc--cchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhc-ccCcccCCCCcCccchhhhhhh
Q 014698          120 EE--RSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL-QEGETSNGATLAPRSNYINMKK  196 (420)
Q Consensus       120 ~~--r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  196 (420)
                      ++  |++++++++.+.++|..++|.+++.+.+..|||+.|++.++..++..+...+. ++..+++.+++.+.......++
T Consensus       140 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (491)
T 4aps_A          140 HDRRRDAGFSIFVFGINLGAFIAPLIVGAAQEAAGYHVAFSLAAIGMFIGLLVYYFGGKKTLDPHYLRPTDPLAPEEVKP  219 (491)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCSCCSCCCSHHHHHH
T ss_pred             ccccceeeehHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhCcccccccccCCCCccccchhHH
Confidence            88  77788889999999999999999999999999999999887776654444433 3222211111111100000000


Q ss_pred             hhhh-------------------------hhh--------------hhcccccccchhhhhhcHHHHHHHHHHHHhHHHH
Q 014698          197 SLSA-------------------------SLE--------------EMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGH  237 (420)
Q Consensus       197 ~~~~-------------------------~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (420)
                      ..+.                         ...              +...+.+..+..+..+....+...+..+.....+
T Consensus       220 ~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (491)
T 4aps_A          220 LLVKVSLAVAGFIAIIVVMNLVGWNSLPAYINLLTIVAIAIPVFYFAWMISSVKVTSTEHLRVVSYIPLFIAAVLFWAIE  299 (491)
T ss_dssp             HHHHCCCCCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHHC------------CTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCcccccchhhhhHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            0000                         000              0000000000011112223444555555556666


Q ss_pred             HHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhh--
Q 014698          238 YTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI--  315 (420)
Q Consensus       238 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  315 (420)
                      .....++|.|.++..+.+..+.+.......+..+++.++.+++.||++||+..    +...+..+.....++..+...  
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~  375 (491)
T 4aps_A          300 EQGSVVLATFAAERVDSSWFPVSWFQSLNPLFIMLYTPFFAWLWTAWKKNQPS----SPTKFAVGLMFAGLSFLLMAIPG  375 (491)
T ss_dssp             GGGGTHHHHHHHHSCCCSSSCSGGGTTHHHHHHHHHHHHHHHHHHHTTTC-------CHHHHHHHHHHHHHHHTTTHHHH
T ss_pred             hhccHHHHHHHHHHhccCccCHHHHhccchHHHHHHHHHHHHHHHHHhccCCC----chHHHHHHHHHHHHHHHHHHHHH
Confidence            66777889999988888877888888999999999999999999999987432    112222333333333222222  


Q ss_pred             ------cCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeee
Q 014698          316 ------DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMS  389 (420)
Q Consensus       316 ------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~  389 (420)
                            ...+..+.....++.+++.+...+.......+..|+++|+++.|+.+...++|..++|.+.+.+.+.  ++...
T Consensus       376 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~i~~~~~~~~~~~--~~~~~  453 (491)
T 4aps_A          376 ALYGTSGKVSPLWLVGSWALVILGEMLISPVGLSVTTKLAPKAFNSQMMSMWFLSSSVGSALNAQLVTLYNAK--SEVAY  453 (491)
T ss_dssp             HHCCCCTTCCTHHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTTCSSSSTHHHHHHHHHHHHHHHHHGGGGGGS--STTHH
T ss_pred             HhcCCCCCccHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cHHHH
Confidence                  1123445555667778887776777777778889999999999999999999999999999988876  45556


Q ss_pred             ehhhhHHHHHHHHHHhhhccCCC
Q 014698          390 LFAPSIFFYLTGTIVWLAFASSK  412 (420)
Q Consensus       390 ~~~~~~~~~~~~~~~~~~~~~~~  412 (420)
                      +...+++.+++.++.+...++.+
T Consensus       454 ~~~~~~~~~~~~~~~~~~~~~~~  476 (491)
T 4aps_A          454 FSYFGLGSVVLGIVLVFLSKRIQ  476 (491)
T ss_dssp             HHHTHHHHHHHHHHHHHC-----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            77776666666666655554443

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=99.98  E-value=5.3e-33  Score=253.29  Aligned_cols=317  Identities=15%  Similarity=0.101  Sum_probs=249.0

Q ss_pred             hhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCcc
Q 014698           41 RIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE  120 (420)
Q Consensus        41 ~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~  120 (420)
                      ........++.+..+++.||++|||++..+..+..++.+..++ +++++.+++.|+++|++.+...+...+++.|++|+|
T Consensus        42 ~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~  120 (375)
T 2gfp_A           42 GAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVT-TSSLTVLIAASAMQGMGTGVGGVMARTLPRDLYERT  120 (375)
T ss_dssp             HHHHHHHHHHHTTHHHHHTTSCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHhhhhhHHHHHHHHCCHH
Confidence            3444444556788888899999999999999999999999886 899999999999999999999999999999999999


Q ss_pred             ccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHH-HhhhcccCcccCCCCcCccchhhhhhhhhh
Q 014698          121 ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFS-GFKILQEGETSNGATLAPRSNYINMKKSLS  199 (420)
Q Consensus       121 ~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (420)
                      +|++++++.+.+.++|..++|.+++++.+..|||+.|++.++..++..+ ....+||++++++++               
T Consensus       121 ~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------  185 (375)
T 2gfp_A          121 QLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETRPVDAPR---------------  185 (375)
T ss_dssp             SCCSHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHCCCCCSSCCCSTTTCCC---------------
T ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHCcccCCCCccc---------------
Confidence            9999999999999999999999999999988999999999888877654 455566654432211               


Q ss_pred             hhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhh
Q 014698          200 ASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQ  279 (420)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~  279 (420)
                              +.++.++++++|+|+++...+..++..........+.|.|+++.+|.++.+.+.......++.+++.++.++
T Consensus       186 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~  257 (375)
T 2gfp_A          186 --------TRLLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGR  257 (375)
T ss_dssp             --------CCTTTCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHT
T ss_pred             --------ccHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                    011223568889999999999999988899999999999999988999999999999999999999999999


Q ss_pred             hhhhhhhcCcchHHHHHHHHHHHH-HHhHHHHHHHhh-cCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHH
Q 014698          280 FADNLIATGVETTMVRKICQTIAF-LSPAVCMTLSSI-DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASIL  357 (420)
Q Consensus       280 l~dr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~  357 (420)
                      +.||.++         +....... ............ ..++........++.+++.+...+.......+..| ++|+++
T Consensus       258 l~~r~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p-~~~g~~  327 (375)
T 2gfp_A          258 PNKRFST---------LMWQSVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-FLAGTA  327 (375)
T ss_dssp             TTTHHHH---------HHHHHHHHHHHTSSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTHHHHHTHHH-HHHHHH
T ss_pred             HHHHHHH---------HHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCC-cccchH
Confidence            9999873         11111111 111111111111 11122333445566777777667777676766676 899999


Q ss_pred             HHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehh
Q 014698          358 LGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFA  392 (420)
Q Consensus       358 ~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~  392 (420)
                      .|+.+...++|..++|.+.|.+.+.. ++...+..
T Consensus       328 ~g~~~~~~~~g~~~~~~~~g~l~~~~-~~~~~~~~  361 (375)
T 2gfp_A          328 GALVGGLQNIGSGVLASLSAMLPQTG-QGSLGLLM  361 (375)
T ss_dssp             HHHHHHHHHHHHHCCSTTCTHHHHHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCC-cccHHHHH
Confidence            99999999999999999999998763 66655555

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.95  E-value=9e-28  Score=221.52  Aligned_cols=344  Identities=10%  Similarity=0.009  Sum_probs=219.4

Q ss_pred             hhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHH---HHhhchH-HHHHHHHHHHHhccccchhhhHHHHHhcCCc
Q 014698           44 LKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALL---PLLAGFM-PGLVLSRVLVGIGEGVSPSAATDLIARSIPL  119 (420)
Q Consensus        44 ~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~-~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~  119 (420)
                      .....+++++.+++.||+||||+++.+..+++++....   .+ .+.. ..+...+.+.|++.+...+.....+.++.++
T Consensus        53 ~~~~~i~~~~~G~lsDr~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  131 (417)
T 2cfq_A           53 SLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIF-GPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEK  131 (417)
T ss_dssp             HHHHHHHHHHHHHHHTTSTTCCHHHHHHHHTTSCHHHHHHHTH-HHHHHTTCCHHHHGGGSSTTHHHHTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence            33445568888888999999999999888775532111   11 2221 1234566676766665555555555555543


Q ss_pred             --cccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhh
Q 014698          120 --EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKS  197 (420)
Q Consensus       120 --~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (420)
                        ++++...+......++|..++|.+++++.+ .+||..|++.++..++..+..++.+|+++++.++++++++       
T Consensus       132 ~~~~~~~~~g~~~~~~~~g~~~~~~l~~~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  203 (417)
T 2cfq_A          132 VSRRSNFEFGRARMFGCVGWALGASIVGIMFT-INNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGA-------  203 (417)
T ss_dssp             HHHHHTCCHHHHSSSTTTHHHHHHHHHHHHHH-HCSHHHHTTTTTTTTTHHHHSCSSCCCCSCSSCSSSSSSS-------
T ss_pred             hhhhcccchHHHHHHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHHHHHHHcCccccccccccccccc-------
Confidence              456778888888999999999999999887 4899999987776555444444444443221110000000       


Q ss_pred             hhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCC---CcchhhHHHHhhHHHHHHHH
Q 014698          198 LSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSL---NLTEAAWVSILPPLASVLVT  274 (420)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~  274 (420)
                             .+++.+..++++++|+|+++...+..+.....+.....+.|.|+++.++.   +....+...+...++.+++.
T Consensus       204 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  276 (417)
T 2cfq_A          204 -------NHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIM  276 (417)
T ss_dssp             -------CCCCCCHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             -------ccccccHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHH
Confidence                   00011112345788899988777665655555556666788888765442   23455777777788888999


Q ss_pred             HhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccch
Q 014698          275 SIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYA  354 (420)
Q Consensus       275 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  354 (420)
                      ++.+++.||+++|        +. ...+....++........ ++.....+...+.+.+.+...........+..|++.|
T Consensus       277 ~~~g~l~dr~g~~--------~~-l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~  346 (417)
T 2cfq_A          277 FFAPLIINRIGGK--------NA-LLLAGTIMSVRIIGSSFA-TSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFS  346 (417)
T ss_dssp             HHHHHHHHHHCHH--------HH-HHHHHHHHHHHHHHHTTC-CSHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred             HHHHHHHHHhcHH--------HH-HHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Confidence            9999999999964        22 233333333333333322 2233333333444555444444455566677899999


Q ss_pred             HHHHHHH-HHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCCC
Q 014698          355 SILLGIT-NTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQ  414 (420)
Q Consensus       355 g~~~g~~-~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (420)
                      |++.+.. +...++|+.++|.+.|.+.|.. ++...|.+.+++.+++.++.+...+++++.
T Consensus       347 g~~~g~~~~~~~~lg~~~gp~l~G~l~~~~-g~~~~f~~~~~~~l~~~~~~~~~~~~~~~~  406 (417)
T 2cfq_A          347 ATIYLVCFCFFKQLAMIFMSVLAGNMYESI-GFQGAYLVLGLVALGFTLISVFTLSGPGPL  406 (417)
T ss_dssp             HHHHHHHHTTTHHHHHHHHTHHHHTHHHHS-HHHHHHHHHHHHHHHHHHHHTTSSCCSCTT
T ss_pred             HHHHHHHHHHHHhHHHHHhhhhHHHHHHhc-CcHHHHHHHHHHHHHHHHHHHhhhcCCCch
Confidence            9999994 8888899999999999999976 577778777776666666555555554443

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.95  E-value=3.3e-26  Score=217.76  Aligned_cols=362  Identities=13%  Similarity=0.056  Sum_probs=212.4

Q ss_pred             hhhhHHhHHhhhhcchhhhc-chhHHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHHhccccchhhhHHHHHhcCCc
Q 014698           42 IYLKDTNLLELLRLPLLFVT-WIRKVLQTGVLIWSLATALLPLLAG-FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL  119 (420)
Q Consensus        42 l~~~~~~~~~l~~~p~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~  119 (420)
                      .+.....++.++.+.+.||+ +|||++..+.++..++.++.++ ++ +++.+++.|++.|++.+...+...+++.|++|+
T Consensus        62 ~~~~~~~~~~~~~G~l~dr~~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~  140 (524)
T 2xut_A           62 SFVIGVYFFPLLGGWIADRFFGKYNTILWLSLIYCVGHAFLAI-FEHSVQGFYTGLFLIALGSGGIKPLVSSFMGDQFDQ  140 (524)
T ss_dssp             HHHHHHHHTHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHHHH-TSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHTCST
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH-hcccHHHHHHHHHHHHHhccccchhHHHHHHHHcCc
Confidence            33444455677888889999 9999999999999999998876 77 999999999999999999999999999999999


Q ss_pred             cccchhhHH---HHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcC---ccchh--
Q 014698          120 EERSRAVSF---VFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLA---PRSNY--  191 (420)
Q Consensus       120 ~~r~~~~~~---~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--  191 (420)
                      ++|+++.+.   .+.+.++|..++|.+++.+.+..|||+.|++.++..++..+.....+++.+++++++.   +..+.  
T Consensus       141 ~~r~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (524)
T 2xut_A          141 SNKSLAQKAFDMFYFTINFGSFFASLSMPLLLKNFGAAVAFGIPGVLMFVATVFFWLGRKRYIHMPPEPKDPHGFLPVIR  220 (524)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHHHHHHHTSTHHHHTSCHHHHHHHHHHHHHHHHHHHHSSSSSCCCCC--------------
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCccchhHHHHHH
Confidence            999877666   8999999999999999999998899999999888876655444433222111110000   00000  


Q ss_pred             ---hhhh--hhhhh---h-----------------------------hhhhccccc---------ccchhhhhhcHHHHH
Q 014698          192 ---INMK--KSLSA---S-----------------------------LEEMGESLK---------DVPWKAIFRSKAVWA  225 (420)
Q Consensus       192 ---~~~~--~~~~~---~-----------------------------~~~~~~~~~---------~~~~~~~~~~~~~~~  225 (420)
                         ....  .+...   .                             ..|.+++.+         ..+..+..+.++.+.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (524)
T 2xut_A          221 SALLTKVEGKGNIGLVLALIGGVSAAYALVNIPTLGIVAGLCCAMVLVMGFVGAGASLQLERARKSHPDAAVDGVRSVLR  300 (524)
T ss_dssp             ------CTTHHHHHHHHHHHHHHHHHHTGGGTTTTCSSHHHHHHHHHHHHHHHTGGGTHHHHSCCSCCSSSSTTTTTHHH
T ss_pred             HHHhhhhcccCccchhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhcccccchhhHHhhhhccccHhHHHHHHHHHH
Confidence               0000  00000   0                             000000000         000001111222222


Q ss_pred             HHHHHHHhHHHHHHH-hhhhhhHhhhhhCCCc---chhhHHHHhhHHHHHHHHHhhhhhh----hhhhhcCcchHHHHHH
Q 014698          226 MIYAHFCGSWGHYTC-LSWLPTYFSEELSLNL---TEAAWVSILPPLASVLVTSIAAQFA----DNLIATGVETTMVRKI  297 (420)
Q Consensus       226 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~g~l~----dr~~~~~~~~~~~~~~  297 (420)
                      ..... ......+.. ..+.+.+.....+.+.   ...+.+.....++.++...+.+++.    ||.+++..     .+.
T Consensus       301 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  374 (524)
T 2xut_A          301 ILVLF-ALVTPFWSLFDQKASTWILQANDMVKPQWFEPAMMQALNPLLVMLLIPFNNFVLYPAIERMGVKLT-----ALR  374 (524)
T ss_dssp             HHHHH-TTSHHHHTTTSSTTTHHHHHHHHSCCCSSSCHHHHHTTSGGGHHHHGGGTTTC------------C-----CHH
T ss_pred             HHHHH-HHHHHHHHHHhccchhhHHhHHhcCCCeeecHHHHHHHHHHHHHHhHHHHHhhhHHHHHhcCCCCC-----hHH
Confidence            21111 111122221 2222222222222222   2456666666677777777776664    33332110     112


Q ss_pred             HHHHHHHHhHHHHHHHhhc--------CCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhH
Q 014698          298 CQTIAFLSPAVCMTLSSID--------LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPG  369 (420)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~  369 (420)
                      ....+....+++.......        ..+..+.....++.+++.+...+.......+..|+++||+++|+.+...++|+
T Consensus       375 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~  454 (524)
T 2xut_A          375 KMGAGIAITGLSWIVVGTIQLMMDGGSALSIFWQILPYALLTFGEVLVSATGLEFAYSQAPKAMKGTIMSFWTLSVTVGN  454 (524)
T ss_dssp             HHHTHHHHHHHHHHTTTTTTTTTTTTCCCCSHHHHHHHHHHHHHHHHHHHHHTTTHHHHCCTTCCTTTHHHHGGGHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHhHHHHHHHHHHHHHH
Confidence            2233333333433333221        12344555566777888887777777778888999999999999999999999


Q ss_pred             HHHHHHHHHHhccCC-ce---------eeeehhhhHHHHHHHHHHhhhccC
Q 014698          370 IVGVALTGYLLDSTH-SW---------SMSLFAPSIFFYLTGTIVWLAFAS  410 (420)
Q Consensus       370 ~~~~~~~g~l~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~  410 (420)
                      .++|.+.|.+.+..+ ++         ...|++.+++.+++.++.+...++
T Consensus       455 ~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (524)
T 2xut_A          455 LWVLLANVSVKSPTVTEQIVQTGMSVTAFQMFFFAGFAILAAIVFALYARS  505 (524)
T ss_dssp             HHHHHHHHHTTSCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred             HHHHHHHHHhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999987421 01         222555555555555554444443

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=99.56  E-value=2.1e-13  Score=128.35  Aligned_cols=176  Identities=9%  Similarity=-0.005  Sum_probs=139.2

Q ss_pred             HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhh-----hCCCcchhhHHHHhhHHHHHHHHHhhhhhhhh-hhhcCcchHHH
Q 014698          221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE-----LSLNLTEAAWVSILPPLASVLVTSIAAQFADN-LIATGVETTMV  294 (420)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~  294 (420)
                      +.++......++..+.++....+++.|+++.     +|.+..+.+++.+...++..+++++.|+++|| +||        
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~--------   84 (491)
T 4aps_A           13 LGLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGTIGGFVADRIIGA--------   84 (491)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCH--------
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--------
Confidence            4567777788888888999999999999988     89999999999999999999999999999999 895        


Q ss_pred             HHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccc--hHHHHHHHHHhhhhhHHHH
Q 014698          295 RKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEY--ASILLGITNTVGAVPGIVG  372 (420)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~~g~~~~  372 (420)
                       +..+..+.....+...+..... +.....+..++.|++.+...+.....+.+.+|+++  |+.+.+..+...++|..++
T Consensus        85 -r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~  162 (491)
T 4aps_A           85 -RPAVFWGGVLIMLGHIVLALPF-GASALFGSIILIIIGTGFLKPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIA  162 (491)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHSCC-STTHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             -hHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHhccchHHHHHHHHcCcccccceeeehHHHHHHHHHHHHH
Confidence             3444445455455444444433 35555666678888888788788888888888888  7888888999999999999


Q ss_pred             HHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhh
Q 014698          373 VALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLA  407 (420)
Q Consensus       373 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (420)
                      |.+.+.+.+.. +|+..|++.++..+++.+..+..
T Consensus       163 ~~~~~~l~~~~-g~~~~f~~~~~~~~~~~~~~~~~  196 (491)
T 4aps_A          163 PLIVGAAQEAA-GYHVAFSLAAIGMFIGLLVYYFG  196 (491)
T ss_dssp             HHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999985 78888888766555555544433

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=99.55  E-value=3e-13  Score=125.74  Aligned_cols=179  Identities=9%  Similarity=-0.003  Sum_probs=135.6

Q ss_pred             cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698          220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ  299 (420)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~  299 (420)
                      .+.++...+..+.............|.+.++ + .+..+.+++.+...++..++.++.|+++||+|+|         ..+
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r---------~~l   95 (451)
T 1pw4_A           27 WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-G-FSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPR---------VFL   95 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSHHHHHHHTTSS-T-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHH---------HHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-ccHhHHHHHHHHHHHHHHHHHHhHHHHHHhcCch---------HHH
Confidence            3445555666666666666667778877766 5 8999999999999999999999999999999963         344


Q ss_pred             HHHHHHhHHHHHHHhh----cCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHH
Q 014698          300 TIAFLSPAVCMTLSSI----DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVAL  375 (420)
Q Consensus       300 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~  375 (420)
                      ..+.....+...+...    .. +.....+..++.|++.+...+.....+.+..|+++|+++.|+.+....+|..++|.+
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~  174 (451)
T 1pw4_A           96 PAGLILAAAVMLFMGFVPWATS-SIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLL  174 (451)
T ss_dssp             HHHHHHHHHHHHHHHHCHHHHS-SSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhccc-cHHHHHHHHHHHHHHhhhccchHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHHH
Confidence            4444444444444433    32 344556666788888887888888888888899999999999999999999999999


Q ss_pred             HHHHhccCCceeeeehhhhHHHHHHHHHHhhhccC
Q 014698          376 TGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFAS  410 (420)
Q Consensus       376 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (420)
                      .+.+.+..++|+..|++.+++.++..++.+...++
T Consensus       175 ~~~l~~~~g~w~~~f~~~~~~~~~~~~~~~~~~~~  209 (451)
T 1pw4_A          175 FLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRD  209 (451)
T ss_dssp             HHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhccC
Confidence            99988876349989998877766666655555554

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=99.51  E-value=9.8e-13  Score=121.80  Aligned_cols=172  Identities=10%  Similarity=0.037  Sum_probs=126.5

Q ss_pred             HHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHH
Q 014698          222 AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTI  301 (420)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~  301 (420)
                      .+....+..+.............|.+. +++|.+..+.+++.+...++..++.++.|+++||+|||         ..+..
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r---------~~l~~   96 (438)
T 3o7q_A           27 PFALLCSLFFLWAVANNLNDILLPQFQ-QAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYK---------AGIIT   96 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHH---------HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcch---------HHHHH
Confidence            344445555555555566666777755 45799999999999999999999999999999999963         33344


Q ss_pred             HHHHhHHHHHHH---hhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHH
Q 014698          302 AFLSPAVCMTLS---SIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGY  378 (420)
Q Consensus       302 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~  378 (420)
                      +.....+...+.   ... ++.+...+..++.|++.+...+.......+..|+++|+++.++.+....+|..++|.+.+.
T Consensus        97 ~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~  175 (438)
T 3o7q_A           97 GLFLYALGAALFWPAAEI-MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQS  175 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTH
T ss_pred             HHHHHHHHHHHHHhcccc-ccHHHHHHHHHHHHhhHHHhhhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444444443333   222 3345555666888999988888888888888999999999999999999999999999999


Q ss_pred             Hh-ccCCc------------------------eeeeehhhhHHHHHHHHHH
Q 014698          379 LL-DSTHS------------------------WSMSLFAPSIFFYLTGTIV  404 (420)
Q Consensus       379 l~-~~~~~------------------------~~~~~~~~~~~~~~~~~~~  404 (420)
                      +. +..+.                        |+..|.+.++...+..++.
T Consensus       176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~  226 (438)
T 3o7q_A          176 LILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLI  226 (438)
T ss_dssp             HHHTSSCCCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhcccccccccccccCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence            98 65443                        7777766665554444433

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.49  E-value=3.1e-13  Score=128.25  Aligned_cols=175  Identities=11%  Similarity=0.022  Sum_probs=133.3

Q ss_pred             cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhC------CCcchhhHHHHhhHHHHHHHHHhhhhhhhhh-hhcCcchH
Q 014698          220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELS------LNLTEAAWVSILPPLASVLVTSIAAQFADNL-IATGVETT  292 (420)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g------~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~~~~  292 (420)
                      +|.++...+..++..+.++....++|.|+++.+|      .++.+.+++.+...++..++.++.|+++||+ |+|     
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~~g~r-----   85 (524)
T 2xut_A           11 PRQIPYIIASEACERFSFYGMRNILTPFLMTALLLSIPEELRGAVAKDVFHSFVIGVYFFPLLGGWIADRFFGKY-----   85 (524)
T ss_dssp             --CCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCSSSTTTTTHHHHHHHHHHHHHHTHHHHHHHHTTSSCSH-----
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----
Confidence            3556667778888888888899999999998889      9999999999999999999999999999999 964     


Q ss_pred             HHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHH---HHHhhhhhH
Q 014698          293 MVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGI---TNTVGAVPG  369 (420)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~---~~~~~~~g~  369 (420)
                         + .+..+.....+...+......+.....+..++.|++.+...+.......+.+|+++|+++.+.   .+...++|.
T Consensus        86 ---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~  161 (524)
T 2xut_A           86 ---N-TILWLSLIYCVGHAFLAIFEHSVQGFYTGLFLIALGSGGIKPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINFGS  161 (524)
T ss_dssp             ---H-HHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHTCSTTTTTHHHHHHHHHHHHHHHHH
T ss_pred             ---H-HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchhHHHHHHHHcCccchHHHHHHHHHHHHHHHHHH
Confidence               2 233344444444444433332345555666778888887778888888888999999776666   888999999


Q ss_pred             HHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHH
Q 014698          370 IVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIV  404 (420)
Q Consensus       370 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~  404 (420)
                      .++|.+.+.+.+.. +|+..|.+.++..++..+..
T Consensus       162 ~~g~~~~~~l~~~~-g~~~~f~~~~~~~~~~~~~~  195 (524)
T 2xut_A          162 FFASLSMPLLLKNF-GAAVAFGIPGVLMFVATVFF  195 (524)
T ss_dssp             HHHHHTSTHHHHTS-CHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccc-cHHHHHHHHHHHHHHHHHHH
Confidence            99999999999875 78888887766555444433

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=99.37  E-value=8.6e-13  Score=119.59  Aligned_cols=176  Identities=7%  Similarity=-0.049  Sum_probs=126.6

Q ss_pred             HHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHH
Q 014698          225 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL  304 (420)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~  304 (420)
                      ...+..++............|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+..         ..+..
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~---------~~~~~   73 (375)
T 2gfp_A            4 MLVLLVAVGQMAQTIYIPAIADMARD-LNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVI---------LVGMS   73 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTT-SSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTTSCCCCCC---------HHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH---------HHHHH
Confidence            34455556666666667777776654 799999999999999999999999999999999987432         12222


Q ss_pred             HhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCC
Q 014698          305 SPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTH  384 (420)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~  384 (420)
                      ...+........+ +........++.|++.+...+.......+..|+++|+++.+..+....+|..++|.+.+.+.+.. 
T Consensus        74 ~~~~~~~~~~~~~-~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-  151 (375)
T 2gfp_A           74 IFMLATLVAVTTS-SLTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMW-  151 (375)
T ss_dssp             HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCHH-
T ss_pred             HHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHhhhhhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhc-
Confidence            2222222222221 23444555577788888777777777777788899999999999999999999999999998875 


Q ss_pred             ceeeeehhhhHHHHHHHHHHhhhccCCC
Q 014698          385 SWSMSLFAPSIFFYLTGTIVWLAFASSK  412 (420)
Q Consensus       385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (420)
                      +|+..+.+.++..++..+......++++
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (375)
T 2gfp_A          152 NWRACYLFLLVLCAGVTFSMARWMPETR  179 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCCCSSCCCS
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHCcccC
Confidence            6887888776665555554444444443

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.26  E-value=1.9e-12  Score=119.02  Aligned_cols=170  Identities=12%  Similarity=0.127  Sum_probs=108.6

Q ss_pred             hhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHH
Q 014698          216 AIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVR  295 (420)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~  295 (420)
                      +.+|||+++......++..........++|.|+++++|.++.+.|++.+...++..+++++.|+++||+|||+       
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~lsDr~Grr~-------   74 (417)
T 2cfq_A            2 YYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRK-------   74 (417)
T ss_dssp             TTTSCHHHHHHHHHHHHHHHHHHHHTTTHHHHHHTTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHHTTSTTCC-------
T ss_pred             ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH-------
Confidence            4678999999888888888888888889999999888999999999999999999999999999999999873       


Q ss_pred             HHHHHHHHHHhH-HHHHHHhhc---CCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccC--ccchHHHHHHHHHhhhhhH
Q 014698          296 KICQTIAFLSPA-VCMTLSSID---LGLPHWEIVGILTAGLALSSFALSGLYCTHQDIS--PEYASILLGITNTVGAVPG  369 (420)
Q Consensus       296 ~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~  369 (420)
                      ............ .........   ....   .....+.+...+...........+..+  +++++.+.|..+....+|.
T Consensus        75 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~  151 (417)
T 2cfq_A           75 YLLWIITGMLVMFAPFFIFIFGPLLQYNI---LVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGW  151 (417)
T ss_dssp             HHHHHHHHTTSCHHHHHHHTHHHHHHTTC---CHHHHGGGSSTTHHHHTTHHHHHHHHHHHHHHHTCCHHHHSSSTTTHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhhcccchHHHHHHHHHHH
Confidence            222222111111 011100000   0001   111111122122111111111111122  2456777888888889999


Q ss_pred             HHHHHHHHHHhccCCceeeeehhhhHHH
Q 014698          370 IVGVALTGYLLDSTHSWSMSLFAPSIFF  397 (420)
Q Consensus       370 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~  397 (420)
                      .++|.+.+.+.+.  +++..|++.++..
T Consensus       152 ~~~~~l~~~l~~~--~~~~~f~~~~~~~  177 (417)
T 2cfq_A          152 ALGASIVGIMFTI--NNQFVFWLGSGCA  177 (417)
T ss_dssp             HHHHHHHHHHHHH--CSHHHHTTTTTTT
T ss_pred             HHHHHHHHHHHHh--chhHHHHHHHHHH
Confidence            9999999999875  4666776655543

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=98.71  E-value=3.5e-07  Score=85.73  Aligned_cols=117  Identities=6%  Similarity=-0.020  Sum_probs=85.0

Q ss_pred             chhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhh-----------------cCCC
Q 014698          257 TEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI-----------------DLGL  319 (420)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~  319 (420)
                      .+.+++.+...++.++|.++.|+++||+|||         ..+..+.++..++.+....                 ..++
T Consensus        55 ~~~g~~~s~~~~G~~iG~~~~G~laDr~GRk---------~~l~~~~~l~~i~~i~~a~~~~~~~~~~~~~~~~~~~a~~  125 (491)
T 4gc0_A           55 SLLGFCVASALIGCIIGGALGGYCSNRFGRR---------DSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGY  125 (491)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHHTCHH---------HHHHHHHHHHHHHHHHHHCTTTTTSCSSSSSSCCGGGGGC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH---------HHHHHHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHhhh
Confidence            3457788888899999999999999999963         4444443333333322221                 1122


Q ss_pred             cHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc
Q 014698          320 PHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS  382 (420)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~  382 (420)
                      ....++.=++.|++.+...+.......|..|+++|++..+..+.....|..+++.+.....+.
T Consensus       126 ~~~l~~~R~l~G~g~G~~~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~  188 (491)
T 4gc0_A          126 VPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARS  188 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhccc
Confidence            334445558889999988888888888889999999999999999999988888877766543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	420
d1pw4a_	447	f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es	1e-10
d1pv7a_	417	f.38.1.2 (A:) Lactose permease {Escherichia coli [	0.003

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

 Score = 60.5 bits (145), Expect = 1e-10
 Identities = 52/353 (14%), Positives = 101/353 (28%), Gaps = 9/353 (2%)

Query: 64  RKVLQTGVLIWSLATA---LLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE 120
           R  L  G+++ +        +P     +  + +   L G  +G+        +      +
Sbjct: 89  RVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQK 148

Query: 121 ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETS 180
           ER   VS      + G     LL    +                    + F      +T 
Sbjct: 149 ERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTP 208

Query: 181 NGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTC 240
               L P   Y N          E   + K +  + +  +K +W +  A+       Y  
Sbjct: 209 QSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGI 268

Query: 241 LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT 300
           L W PTY  E     L +++W   L   A +  T +    +D +       T V  +   
Sbjct: 269 LDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLV 328

Query: 301 IAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGI 360
                        +  + +    ++G L  G  +     +           + A    G 
Sbjct: 329 TIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALEL-----APKKAAGTAAGF 383

Query: 361 TNTVGAVPG-IVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSK 412
           T   G + G +   A+ GY +D        +            ++ +     +
Sbjct: 384 TGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKR 436

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

 Score = 37.1 bits (84), Expect = 0.003
 Identities = 11/98 (11%), Positives = 29/98 (29%), Gaps = 1/98 (1%)

Query: 72  LIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFG 131
                   +    A     +V+ + L               I     +   +      F 
Sbjct: 296 GTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFC 355

Query: 132 -GLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF 168
                  +   +LA  + E++G++  + + GL+ + + 
Sbjct: 356 FFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFT 393

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	420
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	100.0
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.93
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	99.5
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.31

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.2e-35  Score=272.08  Aligned_cols=365  Identities=13%  Similarity=0.127  Sum_probs=263.9

Q ss_pred             ccccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh---hchHHHHHHHHHHHHhccccchhhhHHH
Q 014698           36 IGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL---AGFMPGLVLSRVLVGIGEGVSPSAATDL  112 (420)
Q Consensus        36 ~g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~  112 (420)
                      .|.....+.....+++++.+++.||++||+++..+.++.+++.+++++.   .++++.+++.|++.|++.+...+...++
T Consensus        61 ~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  140 (447)
T d1pw4a_          61 LGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRT  140 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHhhhhhhhHHHHH
Confidence            3444444555556678899999999999999999999999998887652   2577899999999999999999999999


Q ss_pred             HHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhc-cchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchh
Q 014698          113 IARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNY  191 (420)
Q Consensus       113 i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (420)
                      ++|++|+++|++++++.+.+..+|..++|.+++.+.+. .+||+.|++.++..++..+..+.++++++++.....+++.+
T Consensus       141 i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (447)
T d1pw4a_         141 MVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYK  220 (447)
T ss_dssp             HHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCSCTTTC
T ss_pred             HHHHHHhhcccccccccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHHHHHhcccchhhcccchhhhhh
Confidence            99999999999999999999999999999998877664 48999999998888776555554444443332222221111


Q ss_pred             hhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHH
Q 014698          192 INMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASV  271 (420)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  271 (420)
                      ...++ ...+..+.+...++...++.+++|.++......++.....+....+.|.|+++.++.+..+.+.......+..+
T Consensus       221 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (447)
T d1pw4a_         221 NDYPD-DYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGI  299 (447)
T ss_dssp             CC--------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHH
T ss_pred             hhccc-chhhccccccchhhHHHHHHHcCchHHHHHHHhhhhhhhhhcchhhhhhhcccccccccchhhhhhhcchhhhh
Confidence            11111 11111112222233345678889999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccC
Q 014698          272 LVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDL-GLPHWEIVGILTAGLALSSFALSGLYCTHQDIS  350 (420)
Q Consensus       272 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  350 (420)
                      ++.++.|++.||+++++      +...................... ++.....+..++.|++.+...........+..|
T Consensus       300 ~~~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p  373 (447)
T d1pw4a_         300 PGTLLCGWMSDKVFRGN------RGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAP  373 (447)
T ss_dssp             HHHHHHHHHHHHTSTTC------HHHHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSC
T ss_pred             hhhhhhhhhhhhccccc------cccccchhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            99999999999998763      22222222222222222222222 233444445566676666566666666777789


Q ss_pred             ccchHHHHHHHHHhhhhh-HHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhc
Q 014698          351 PEYASILLGITNTVGAVP-GIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAF  408 (420)
Q Consensus       351 ~~~~g~~~g~~~~~~~~g-~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (420)
                      ++.||++.|+.+...+++ ..++|.+.|.+.|.. ++...+.+.+++.+++.++.+...
T Consensus       374 ~~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~  431 (447)
T d1pw4a_         374 KKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-GWDGGFMVMIGGSILAVILLIVVM  431 (447)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS-CSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999988875 567899999999997 566677766665655555544443

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=1.7e-24  Score=196.89  Aligned_cols=358  Identities=12%  Similarity=0.009  Sum_probs=224.1

Q ss_pred             hhhhccccccchhhhh---HHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHH----HHHHHHHHHhcc
Q 014698           30 KWVGLRIGRRGRIYLK---DTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPG----LVLSRVLVGIGE  102 (420)
Q Consensus        30 ~~l~~~~g~~~~l~~~---~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~r~l~G~~~  102 (420)
                      ++++.+..+.+.+.+.   ...+++++.+++.||+||||+++.+..+..++..+... .++...    .+..+.+.+.+.
T Consensus        36 ~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  114 (417)
T d1pv7a_          36 DINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFI-FIFGPLLQYNILVGSIVGGIYL  114 (417)
T ss_dssp             HHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCTHHHHHHHHHHHTHHHHHH-HTHHHHHHTTCHHHHHHTTTTG
T ss_pred             HccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH-hhhhhhHHHHHHHHHHHhhhcc
Confidence            3445444444444433   44455778888899999999999999988888877765 544443    345556666555


Q ss_pred             ccchhhhHHHHHhcCCc--cccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHH-HHHHhhhcccCcc
Q 014698          103 GVSPSAATDLIARSIPL--EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIA-WFSGFKILQEGET  179 (420)
Q Consensus       103 ~~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~-~~~~~~~~~~~~~  179 (420)
                      +...........+..++  +++.+..+........+..++|.+++.+.+. +|+..+........+ ..+..+..+|+++
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (417)
T d1pv7a_         115 GFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTI-NNQFVFWLGSGCALILAVLLFFAKTDAPS  193 (417)
T ss_dssp             GGGGTTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHSSCCCSCS
T ss_pred             cccccchhhcccccccchhhhhHHHHHHHhhhhccccccccccccccccc-cccccccchhhHHHHHHHHHHHHhccccc
Confidence            55555544444444332  3566677888889999999999999988876 555556555555444 4455555555544


Q ss_pred             cCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHH---hhhhhhHhhhhhCCCc
Q 014698          180 SNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTC---LSWLPTYFSEELSLNL  256 (420)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~  256 (420)
                      .+++++++++.               +++.......+..+++..+................   ....+.+..+..+.+.
T Consensus       194 ~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (417)
T d1pv7a_         194 SATVANAVGAN---------------HSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGT  258 (417)
T ss_dssp             SSCSSHHHHSC---------------CCCCCHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHH
T ss_pred             chhhhhhhhhh---------------cccccccccccccccccccchhhhhHHHHHHHHhhhccccccccccccccccch
Confidence            33322111110               00011111122333333333322222222222222   2222222222334556


Q ss_pred             chhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhh
Q 014698          257 TEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSS  336 (420)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  336 (420)
                      ...+.......++..++..+.+++.||.++         +.....+.....+......... +.....+..++.+++.+.
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~---------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~  328 (417)
T d1pv7a_         259 RVFGYVTTMGELLNASIMFFAPLIINRIGG---------KNALLLAGTIMSVRIIGSSFAT-SALEVVILKTLHMFEVPF  328 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTHHHHHHHHCH---------HHHHHHHHHHHHHHHHHHHTCC-CHHHHHHHHHHHHHHHHH
T ss_pred             hhhcccccccccccccchhhhhhhhccccc---------ccchhhhHHHHHHhhhcccccc-ccchhhHHHHHHHHHHHH
Confidence            667777788888899999999999999985         3344444444444444444433 355555566777888887


Q ss_pred             hhhhhhhhhhhccCccchHHHHHHHH-HhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCCCC
Q 014698          337 FALSGLYCTHQDISPEYASILLGITN-TVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQN  415 (420)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (420)
                      ..+.......+..|+++|+++.|+.. ....+|..++|.+.|++.|+. +++..+++.+++.++..++..+..+++++.+
T Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  407 (417)
T d1pv7a_         329 LLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESI-GFQGAYLVLGLVALGFTLISVFTLSGPGPLS  407 (417)
T ss_dssp             HHHHHHHHHHHHSCGGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHSCCSSCTT
T ss_pred             HHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Confidence            77777788888899999999999865 556799999999999999997 6777888888777777777767666665544

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.50  E-value=6.3e-13  Score=121.08  Aligned_cols=155  Identities=12%  Similarity=0.038  Sum_probs=118.3

Q ss_pred             hHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhc---CCCcHH
Q 014698          246 TYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID---LGLPHW  322 (420)
Q Consensus       246 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  322 (420)
                      .+++| +|+|..+.|++.+...++..++.++.|+++||+|||         ..+..+.+...+...+....   .++...
T Consensus        49 p~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (447)
T d1pw4a_          49 PYLVE-QGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPR---------VFLPAGLILAAAVMLFMGFVPWATSSIAV  118 (447)
T ss_dssp             HHTTS-STTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHH---------HHHHHHHHHHHHHHHHHHHCHHHHSSSSH
T ss_pred             HHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch---------HHHHHHHHHHHHHHhhccccchhhhhHHH
Confidence            35565 699999999999999999999999999999999963         33444444433333332221   123445


Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHH
Q 014698          323 EIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGT  402 (420)
Q Consensus       323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~  402 (420)
                      ..+..++.|++.+...+.....+.+.+|+++|+++.|+.+....+|..++|.+.+.+.+..++|+..+++.+.+..+..+
T Consensus       119 ~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~  198 (447)
T d1pw4a_         119 MFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVAL  198 (447)
T ss_dssp             HHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhhhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHH
Confidence            55666777888887777777788888999999999999999999999999999998888777888888887777766666


Q ss_pred             HHhhhccC
Q 014698          403 IVWLAFAS  410 (420)
Q Consensus       403 ~~~~~~~~  410 (420)
                      +.+...++
T Consensus       199 ~~~~~~~~  206 (447)
T d1pw4a_         199 FAFAMMRD  206 (447)
T ss_dssp             HHHHHCCC
T ss_pred             HHHHhccc
Confidence            66665543

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.31  E-value=2.7e-12  Score=115.10  Aligned_cols=183  Identities=13%  Similarity=0.152  Sum_probs=112.1

Q ss_pred             hhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHH
Q 014698          216 AIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVR  295 (420)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~  295 (420)
                      +.+|||++|.+.+..++..+.......++|.|+++.+|.|+.+.|++.+...++..+++++.|+++||+|||       |
T Consensus         2 ~~lkn~~~~~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr-------~   74 (417)
T d1pv7a_           2 YYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLR-------K   74 (417)
T ss_dssp             HHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTC-------T
T ss_pred             CcccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-------H
Confidence            357899999999999998888888888999999998999999999999999999999999999999999986       2


Q ss_pred             HHHHHHHHHHhHHHHHHHhhcCCCcHH---HHHHHHHHHHHhhhhhhhhhhhhhhccC--ccchHHHHHHHHHhhhhhHH
Q 014698          296 KICQTIAFLSPAVCMTLSSIDLGLPHW---EIVGILTAGLALSSFALSGLYCTHQDIS--PEYASILLGITNTVGAVPGI  370 (420)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~  370 (420)
                      .....  .....+..............   ........+...+..............+  .+++....+........+..
T Consensus        75 ~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (417)
T d1pv7a_          75 YLLWI--ITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWA  152 (417)
T ss_dssp             HHHHH--HHHHHHTHHHHHHHTHHHHHHTTCHHHHHHTTTTGGGGGTTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHH
T ss_pred             HHHHH--HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcccccccchhhcccccccchhhhhHHHHHHHhhhhccccc
Confidence            22222  11111211111111110110   1111122222222222222222222222  23445566777777888889


Q ss_pred             HHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698          371 VGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFA  409 (420)
Q Consensus       371 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (420)
                      ++|.+.+.+.+.. .+. .+........+.........+
T Consensus       153 ~~~~~~~~l~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~  189 (417)
T d1pv7a_         153 LGASIVGIMFTIN-NQF-VFWLGSGCALILAVLLFFAKT  189 (417)
T ss_dssp             HHHHHHHHHHHHC-HHH-HHHHHHHHHHHHHHHHHSSCC
T ss_pred             ccccccccccccc-ccc-cccchhhHHHHHHHHHHHHhc
Confidence            9999999988773 333 344433334444444444333