Citrus Sinensis ID: 014715

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420
MCGILAVLGCSDDSQAKRVRVLELSRRLKHRGPDWSGLYQHGDFYLAHQRLAIIDPASGDQPLYNEDKKIVVTVNGEIYNHEALRERLTNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDSSLVASITARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMVLLT
cEEEEEEEccccccHHHHHHHHHHHHccccccccccccEEEccEEEEEEccEEEcccccccccccccccEEEEEccccccHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccEEEEEEEEccccEEEEEccccccccEEEEEccccEEEEEEccccccccccccEEEccccEEEEEcccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHcccccEEEccccccHHHHHHHHHHHHHHcccccccccccccEEEccccccccHHHHHHHHHHHcccEEEEEEcHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccEEEEEcccHHHHcccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHcccHHHHHcccc
ccEEEEEEcccccHHHHHHHHHHHHHHHHHcccccccEEEcccEEEEEEEEEEEcccccccccEcccccEEEEEEcEEccHHHHHHHcccccccccccHHHHHHHHHHccccHHHHcccEEEEEEEcccccEEEEEEccccEEEEEEcccccccEEEHHHHHHHcccccHEEEcccccEEEcccccEEEEEcccccHHccccccccHHHHHHHHHHHHHHHHHcccccEEEEcccccHHHHHHHHHHHHccccHHHcccccccEEEEcccccHHHHHHHHHHHHHcccccEEEEEHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHcccEEEEcccccHHHHccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEccccccHHHHHHHHcccHHHHHHccc
mcgilavlgcsddsqAKRVRVLELSRRLkhrgpdwsglyqhgdfylaHQRLaiidpasgdqplynedkkIVVTVNGEIYNHEALRERLtnhkfrtgsdcDVIAHLYEEYGENFVDMLDGMFSFVlldtrdnsfivarDAIGITSLYIGWGLDGSIWISSElkglnddcehfeafppghlyssksgglkrwynptwyseaipstpydplVLRQAFENAVIKRLMTDVPFGVllsggldsslVASITARHLAGTKAARQWGTQLHSFCVglegspdlkYAKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHVETYdvttirastpmfLMSRKIKSLGVKMVIsgegsdeifggylyfhkapnkeefHRETCHKIKALHQYDCLrankstsawglearvpfldkdfINVAMAIDPEWKMVLLT
MCGILAVlgcsddsqakRVRVLELSrrlkhrgpdwsglYQHGDFYLAHQRLAIIDpasgdqplyneDKKIVVTVNGEIYNHEALRerltnhkfrtgsDCDVIAHLYEEYGENFVDMLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDSSLVASITARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHVETYDvttirastpmfLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMVLLT
MCGILAVLGCSDDSQAKRVRVLELSRRLKHRGPDWSGLYQHGDFYLAHQRLAIIDPASGDQPLYNEDKKIVVTVNGEIYNHEALRERLTNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFgvllsggldsslvasITARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMVLLT
**GILAVLGCSDDSQAKRVRVLELSRRLKHRGPDWSGLYQHGDFYLAHQRLAIIDPASGDQPLYNEDKKIVVTVNGEIYNHEALRERLTNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDSSLVASITARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMVL**
MCGILAVLGCSDDSQAKRVRVLELSRRLKHRGPDWSGLYQHGDFYLAHQRLAIIDPASGDQPLYNEDKKIVVTVNGEIYNHEALRERLTNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDSSLVASITARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMVLL*
MCGILAVLGCSDDSQAKRVRVLELSRRLKHRGPDWSGLYQHGDFYLAHQRLAIIDPASGDQPLYNEDKKIVVTVNGEIYNHEALRERLTNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDSSLVASITARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMVLLT
MCGILAVLGCSDDSQAKRVRVLELSRRLKHRGPDWSGLYQHGDFYLAHQRLAIIDPASGDQPLYNEDKKIVVTVNGEIYNHEALRERLTNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDSSLVASITARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMVL**
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SSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MCGILAVLGCSDDSQAKRVRVLELSRRLKHRGPDWSGLYQHGDFYLAHQRLAIIDPASGDQPLYNEDKKIVVTVNGEIYNHEALRERLTNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDSSLVASITARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMVLLT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query420 2.2.26 [Sep-21-2011]
P49078 584 Asparagine synthetase [gl no no 0.992 0.714 0.880 0.0
O24661 586 Asparagine synthetase [gl N/A no 0.992 0.711 0.882 0.0
P31752 590 Asparagine synthetase [gl N/A no 0.992 0.706 0.872 0.0
P49092 586 Asparagine synthetase [gl N/A no 0.992 0.711 0.880 0.0
P49091 586 Asparagine synthetase [gl N/A no 0.992 0.711 0.866 0.0
O24338 525 Asparagine synthetase [gl N/A no 0.992 0.794 0.868 0.0
P49093 586 Asparagine synthetase [gl N/A no 0.992 0.711 0.856 0.0
P19252 583 Asparagine synthetase, ro N/A no 0.992 0.715 0.868 0.0
P19251 586 Asparagine synthetase, no N/A no 0.992 0.711 0.858 0.0
Q9LFU1 578 Asparagine synthetase [gl no no 0.992 0.721 0.822 0.0
>sp|P49078|ASNS1_ARATH Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Arabidopsis thaliana GN=ASN1 PE=2 SV=2 Back     alignment and function desciption
 Score =  788 bits (2036), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/417 (88%), Positives = 400/417 (95%)

Query: 1   MCGILAVLGCSDDSQAKRVRVLELSRRLKHRGPDWSGLYQHGDFYLAHQRLAIIDPASGD 60
           MCGILAVLGCSDDSQAKRVRVLELSRRL+HRGPDWSGLYQ+GD YLAHQRLA+IDPASGD
Sbjct: 1   MCGILAVLGCSDDSQAKRVRVLELSRRLRHRGPDWSGLYQNGDNYLAHQRLAVIDPASGD 60

Query: 61  QPLYNEDKKIVVTVNGEIYNHEALRERLTNHKFRTGSDCDVIAHLYEEYGENFVDMLDGM 120
           QPL+NEDK IVVTVNGEIYNHE LR+RL NHKFRTGSDC+VIAHLYEEYG +FVDMLDG+
Sbjct: 61  QPLFNEDKTIVVTVNGEIYNHEELRKRLKNHKFRTGSDCEVIAHLYEEYGVDFVDMLDGI 120

Query: 121 FSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLY 180
           FSFVLLDTRDNSF+VARDAIG+TSLYIGWGLDGS+WISSE+KGLNDDCEHFE FPPGH Y
Sbjct: 121 FSFVLLDTRDNSFMVARDAIGVTSLYIGWGLDGSVWISSEMKGLNDDCEHFETFPPGHFY 180

Query: 181 SSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDSSL 240
           SSK GG K+WYNP W++E++PSTPY+PL +R+AFENAVIKRLMTDVPFGVLLSGGLDSSL
Sbjct: 181 SSKLGGFKQWYNPPWFNESVPSTPYEPLAIRRAFENAVIKRLMTDVPFGVLLSGGLDSSL 240

Query: 241 VASITARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTVQDGI 300
           VASITARHLAGTKAA+QWG QLHSFCVGLEGSPDLK  KEVA+YLGTVHHEFHF+VQDGI
Sbjct: 241 VASITARHLAGTKAAKQWGPQLHSFCVGLEGSPDLKAGKEVAEYLGTVHHEFHFSVQDGI 300

Query: 301 DAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPN 360
           DAIE+VIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMV+SGEG+DEIFGGYLYFHKAPN
Sbjct: 301 DAIEDVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVLSGEGADEIFGGYLYFHKAPN 360

Query: 361 KEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMV 417
           K+EFH+ETC KIKALH+YDCLRANKSTSA+GLEARVPFLDKDFIN AM++DPE KM+
Sbjct: 361 KKEFHQETCRKIKALHKYDCLRANKSTSAFGLEARVPFLDKDFINTAMSLDPESKMI 417

Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 3EC: .EC: 5EC: .EC: 4
>sp|O24661|ASNS_TRIVS Asparagine synthetase [glutamine-hydrolyzing] OS=Triphysaria versicolor GN=AS PE=2 SV=3 Back     alignment and function description
>sp|P31752|ASNS_ASPOF Asparagine synthetase [glutamine-hydrolyzing] OS=Asparagus officinalis PE=2 SV=2 Back     alignment and function description
>sp|P49092|ASNS1_LOTJA Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Lotus japonicus GN=AS1 PE=2 SV=2 Back     alignment and function description
>sp|P49091|ASNS_BRAOL Asparagine synthetase [glutamine-hydrolyzing] OS=Brassica oleracea PE=2 SV=2 Back     alignment and function description
>sp|O24338|ASNS_SANAU Asparagine synthetase [glutamine-hydrolyzing] OS=Sandersonia aurantiaca GN=AND1 PE=2 SV=3 Back     alignment and function description
>sp|P49093|ASNS2_LOTJA Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Lotus japonicus GN=AS2 PE=2 SV=2 Back     alignment and function description
>sp|P19252|ASNS2_PEA Asparagine synthetase, root [glutamine-hydrolyzing] OS=Pisum sativum GN=AS2 PE=2 SV=3 Back     alignment and function description
>sp|P19251|ASNS1_PEA Asparagine synthetase, nodule [glutamine-hydrolyzing] OS=Pisum sativum GN=AS1 PE=2 SV=3 Back     alignment and function description
>sp|Q9LFU1|ASNS3_ARATH Asparagine synthetase [glutamine-hydrolyzing] 3 OS=Arabidopsis thaliana GN=ASN3 PE=2 SV=1 Back     alignment and function description

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query420
TAIR|locus:2099580 584 ASN1 "glutamine-dependent aspa 0.992 0.714 0.844 2.9e-199
TAIR|locus:2145377 578 ASN3 "asparagine synthetase 3" 0.992 0.721 0.786 2.7e-187
TAIR|locus:2177694 578 ASN2 "asparagine synthetase 2" 0.992 0.721 0.779 3.4e-187
DICTYBASE|DDB_G0286059 557 asns "asparagine synthetase" [ 0.990 0.746 0.563 8.1e-131
UNIPROTKB|P22106 554 asnB [Escherichia coli K-12 (t 0.990 0.750 0.530 1.8e-119
TIGR_CMR|CPS_2794 554 CPS_2794 "asparagine synthase 0.990 0.750 0.526 2.6e-118
POMBASE|SPBC119.10 557 asn1 "asparagine synthetase" [ 0.992 0.748 0.539 3.4e-116
ASPGD|ASPL0000073587 571 AN4401 [Emericella nidulans (t 0.373 0.274 0.713 1.1e-114
UNIPROTKB|G4ND55 583 MGG_00969 "Asparagine syntheta 0.373 0.269 0.687 1.3e-113
UNIPROTKB|Q9KTB2 554 VC_0991 "Asparagine synthetase 0.990 0.750 0.507 8.4e-113
TAIR|locus:2099580 ASN1 "glutamine-dependent asparagine synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1929 (684.1 bits), Expect = 2.9e-199, P = 2.9e-199
 Identities = 352/417 (84%), Positives = 385/417 (92%)

Query:     1 MCGILAVLGCSDDSQAKRVRVLELSRRLKHRGPDWSGLYQHGDFYLAHQRLAIIDPASGD 60
             MCGILAVLGCSDDSQAKRVRVLELSRRL+HRGPDWSGLYQ+GD YLAHQRLA+IDPASGD
Sbjct:     1 MCGILAVLGCSDDSQAKRVRVLELSRRLRHRGPDWSGLYQNGDNYLAHQRLAVIDPASGD 60

Query:    61 QPLYNEDKKIVVTVNGEIYNHEALRERLTNHKFRTGSDCDVIAHLYEEYGENFVDMLDGM 120
             QPL+NEDK IVVTVNGEIYNHE LR+RL NHKFRTGSDC+VIAHLYEEYG +FVDMLDG+
Sbjct:    61 QPLFNEDKTIVVTVNGEIYNHEELRKRLKNHKFRTGSDCEVIAHLYEEYGVDFVDMLDGI 120

Query:   121 FSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLY 180
             FSFVLLDTRDNSF+VARDAIG+TSLYIGWGLDGS+WISSE+KGLNDDCEHFE FPPGH Y
Sbjct:   121 FSFVLLDTRDNSFMVARDAIGVTSLYIGWGLDGSVWISSEMKGLNDDCEHFETFPPGHFY 180

Query:   181 SSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFXXXXXXXXXXXX 240
             SSK GG K+WYNP W++E++PSTPY+PL +R+AFENAVIKRLMTDVPF            
Sbjct:   181 SSKLGGFKQWYNPPWFNESVPSTPYEPLAIRRAFENAVIKRLMTDVPFGVLLSGGLDSSL 240

Query:   241 XXXITARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTVQDGI 300
                ITARHLAGTKAA+QWG QLHSFCVGLEGSPDLK  KEVA+YLGTVHHEFHF+VQDGI
Sbjct:   241 VASITARHLAGTKAAKQWGPQLHSFCVGLEGSPDLKAGKEVAEYLGTVHHEFHFSVQDGI 300

Query:   301 DAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPN 360
             DAIE+VIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMV+SGEG+DEIFGGYLYFHKAPN
Sbjct:   301 DAIEDVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVLSGEGADEIFGGYLYFHKAPN 360

Query:   361 KEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMV 417
             K+EFH+ETC KIKALH+YDCLRANKSTSA+GLEARVPFLDKDFIN AM++DPE KM+
Sbjct:   361 KKEFHQETCRKIKALHKYDCLRANKSTSAFGLEARVPFLDKDFINTAMSLDPESKMI 417
GO:0004066 "asparagine synthase (glutamine-hydrolyzing) activity" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0009063 "cellular amino acid catabolic process" evidence=TAS
GO:0006529 "asparagine biosynthetic process" evidence=IGI
GO:0043617 "cellular response to sucrose starvation" evidence=IEP
GO:0009744 "response to sucrose stimulus" evidence=IEP;RCA
GO:0009749 "response to glucose stimulus" evidence=IEP
GO:0009750 "response to fructose stimulus" evidence=IEP;RCA
GO:0009646 "response to absence of light" evidence=TAS
TAIR|locus:2145377 ASN3 "asparagine synthetase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2177694 ASN2 "asparagine synthetase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0286059 asns "asparagine synthetase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|P22106 asnB [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_2794 CPS_2794 "asparagine synthase (glutamine-hydrolyzing)" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
POMBASE|SPBC119.10 asn1 "asparagine synthetase" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
ASPGD|ASPL0000073587 AN4401 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|G4ND55 MGG_00969 "Asparagine synthetase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KTB2 VC_0991 "Asparagine synthetase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O24661ASNS_TRIVS6, ., 3, ., 5, ., 40.88240.99280.7116N/Ano
P49089ASNS1_YEAST6, ., 3, ., 5, ., 40.51240.99040.7272yesno
P31752ASNS_ASPOF6, ., 3, ., 5, ., 40.87290.99280.7067N/Ano
Q54MB4ASNS_DICDI6, ., 3, ., 5, ., 40.59340.99040.7468yesno
Q43011ASNS2_ORYSJ6, ., 3, ., 5, ., 40.81290.99280.7055yesno
P19251ASNS1_PEA6, ., 3, ., 5, ., 40.85880.99280.7116N/Ano
P19252ASNS2_PEA6, ., 3, ., 5, ., 40.86810.99280.7152N/Ano
P78753ASNS_SCHPO6, ., 3, ., 5, ., 40.56710.99280.7486yesno
P49092ASNS1_LOTJA6, ., 3, ., 5, ., 40.88000.99280.7116N/Ano
P49093ASNS2_LOTJA6, ., 3, ., 5, ., 40.85610.99280.7116N/Ano
P49091ASNS_BRAOL6, ., 3, ., 5, ., 40.86600.99280.7116N/Ano
P49094ASNS_MAIZE6, ., 3, ., 5, ., 40.80570.99280.7116N/Ano
O24338ASNS_SANAU6, ., 3, ., 5, ., 40.86810.99280.7942N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.3.50.976
3rd Layer6.3.5.40.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_Genewise1_v1.C_LG_IX3026
asparagine synthase (glutamine-hydrolyzing) (EC-6.3.5.4) (590 aa)
(Populus trichocarpa)
Predicted Functional Partners:
estExt_fgenesh4_pm.C_LG_XVIII0241
SubName- Full=Putative uncharacterized protein; (407 aa)
     •• 0.967
gw1.XIV.3012.1
aspartate transaminase (EC-2.6.1.1) (403 aa)
     •• 0.967
estExt_fgenesh4_pg.C_LG_VI1672
aspartate transaminase (EC-2.6.1.1) (449 aa)
     •• 0.967
grail3.0013044701
aspartate transaminase (EC-2.6.1.1) (466 aa)
     •• 0.966
estExt_fgenesh4_pm.C_LG_XVIII0158
aspartate transaminase (EC-2.6.1.1) (466 aa)
     •• 0.966
gw1.VI.2755.1
aspartate transaminase (EC-2.6.1.1) (397 aa)
     •• 0.966
estExt_fgenesh4_pg.C_LG_VI1671
aspartate transaminase (EC-2.6.1.1) (442 aa)
     •• 0.966
eugene3.00012554
aspartate carbamoyltransferase (EC-2.1.3.2) (332 aa)
     •• 0.918
estExt_fgenesh4_pg.C_LG_XVI0748
adenylosuccinate synthase (EC-6.3.4.4); Plays an important role in the de novo pathway of purin [...] (491 aa)
   • •• 0.915
gw1.X.3427.1
hypothetical protein (424 aa)
   • •• 0.913

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query420
PLN02549 578 PLN02549, PLN02549, asparagine synthase (glutamine 0.0
PRK09431 554 PRK09431, asnB, asparagine synthetase B; Provision 0.0
PTZ00077 586 PTZ00077, PTZ00077, asparagine synthetase-like pro 0.0
TIGR01536466 TIGR01536, asn_synth_AEB, asparagine synthase (glu 1e-147
COG0367 542 COG0367, AsnB, Asparagine synthase (glutamine-hydr 1e-135
cd00712220 cd00712, AsnB, Glutamine amidotransferases class-I 1e-74
cd01991269 cd01991, Asn_Synthase_B_C, The C-terminal domain o 7e-67
pfam00733195 pfam00733, Asn_synthase, Asparagine synthase 6e-63
TIGR03108 628 TIGR03108, eps_aminotran_1, exosortase A system-as 3e-57
pfam13537120 pfam13537, GATase_7, Glutamine amidotransferase do 8e-54
TIGR03104589 TIGR03104, trio_amidotrans, asparagine synthase fa 2e-52
cd00352220 cd00352, Gn_AT_II, Glutamine amidotransferases cla 4e-49
pfam13522130 pfam13522, GATase_6, Glutamine amidotransferase do 6e-38
pfam00310223 pfam00310, GATase_2, Glutamine amidotransferases c 5e-19
cd03766181 cd03766, Gn_AT_II_novel, Gn_AT_II_novel 6e-14
COG0034470 COG0034, PurF, Glutamine phosphoribosylpyrophospha 4e-13
cd00714215 cd00714, GFAT, Glutamine amidotransferases class-I 4e-10
cd01910224 cd01910, Wali7, This domain is present in Wali7, a 6e-10
pfam12481228 pfam12481, DUF3700, Aluminium induced protein 9e-10
TIGR01135 607 TIGR01135, glmS, glucosamine--fructose-6-phosphate 6e-09
COG0449 597 COG0449, GlmS, Glucosamine 6-phosphate synthetase, 6e-09
TIGR01134442 TIGR01134, purF, amidophosphoribosyltransferase 2e-08
PRK09123479 PRK09123, PRK09123, amidophosphoribosyltransferase 8e-08
PRK00331 604 PRK00331, PRK00331, glucosamine--fructose-6-phosph 2e-07
PLN02440479 PLN02440, PLN02440, amidophosphoribosyltransferase 8e-07
cd00715252 cd00715, GPATase_N, Glutamine amidotransferases cl 4e-06
PRK08341442 PRK08341, PRK08341, amidophosphoribosyltransferase 5e-06
PRK07272484 PRK07272, PRK07272, amidophosphoribosyltransferase 2e-05
cd01907249 cd01907, GlxB, Glutamine amidotransferases class-I 2e-05
PRK07631475 PRK07631, PRK07631, amidophosphoribosyltransferase 4e-05
PTZ00295 640 PTZ00295, PTZ00295, glucosamine-fructose-6-phospha 1e-04
PRK05793469 PRK05793, PRK05793, amidophosphoribosyltransferase 2e-04
cd01909199 cd01909, betaLS_CarA_N, Glutamine amidotransferase 5e-04
cd01986103 cd01986, Alpha_ANH_like, Adenine nucleotide alpha 0.002
>gnl|CDD|178164 PLN02549, PLN02549, asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information 
 Score =  904 bits (2338), Expect = 0.0
 Identities = 363/417 (87%), Positives = 389/417 (93%)

Query: 1   MCGILAVLGCSDDSQAKRVRVLELSRRLKHRGPDWSGLYQHGDFYLAHQRLAIIDPASGD 60
           MCGILAVLGCSDDSQAKR RVLELSRRL+HRGPDWSGLY + D YLAH+RLAI+DP SGD
Sbjct: 1   MCGILAVLGCSDDSQAKRSRVLELSRRLRHRGPDWSGLYGNEDCYLAHERLAIMDPESGD 60

Query: 61  QPLYNEDKKIVVTVNGEIYNHEALRERLTNHKFRTGSDCDVIAHLYEEYGENFVDMLDGM 120
           QPLYNEDK IVVT NGEIYNH+ LRE+L  HKFRTGSDC+VIAHLYEE+GE FVDMLDGM
Sbjct: 61  QPLYNEDKTIVVTANGEIYNHKELREKLKLHKFRTGSDCEVIAHLYEEHGEEFVDMLDGM 120

Query: 121 FSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLY 180
           FSFVLLDTRDNSFI ARD IGIT LYIGWGLDGS+W +SE+K L DDCE FE FPPGH Y
Sbjct: 121 FSFVLLDTRDNSFIAARDHIGITPLYIGWGLDGSVWFASEMKALCDDCERFEEFPPGHYY 180

Query: 181 SSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDSSL 240
           SSK+GG +RWYNP W+SE+IPSTPYDPLVLR+AFE AVIKRLMTDVPFGVLLSGGLDSSL
Sbjct: 181 SSKAGGFRRWYNPPWFSESIPSTPYDPLVLREAFEKAVIKRLMTDVPFGVLLSGGLDSSL 240

Query: 241 VASITARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTVQDGI 300
           VASI ARHLA TKAARQWG QLHSFCVGLEGSPDLK A+EVADYLGTVHHEFHFTVQ+GI
Sbjct: 241 VASIAARHLAETKAARQWGQQLHSFCVGLEGSPDLKAAREVADYLGTVHHEFHFTVQEGI 300

Query: 301 DAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPN 360
           DAIE+VIYH+ETYDVTTIRASTPMFLMSRKIKSLGVKMV+SGEGSDEIFGGYLYFHKAPN
Sbjct: 301 DAIEDVIYHLETYDVTTIRASTPMFLMSRKIKSLGVKMVLSGEGSDEIFGGYLYFHKAPN 360

Query: 361 KEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMV 417
           KEEFH+ETC KIKALHQYDCLRANKSTSAWGLEARVPFLDK+FI+VAM+IDPEWKM+
Sbjct: 361 KEEFHKETCRKIKALHQYDCLRANKSTSAWGLEARVPFLDKEFIDVAMSIDPEWKMI 417

Length = 578
>gnl|CDD|236513 PRK09431, asnB, asparagine synthetase B; Provisional Back     alignment and domain information
>gnl|CDD|185431 PTZ00077, PTZ00077, asparagine synthetase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|233454 TIGR01536, asn_synth_AEB, asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information
>gnl|CDD|223444 COG0367, AsnB, Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|238364 cd00712, AsnB, Glutamine amidotransferases class-II (GATase) asparagine synthase_B type Back     alignment and domain information
>gnl|CDD|238949 cd01991, Asn_Synthase_B_C, The C-terminal domain of Asparagine Synthase B Back     alignment and domain information
>gnl|CDD|216090 pfam00733, Asn_synthase, Asparagine synthase Back     alignment and domain information
>gnl|CDD|132152 TIGR03108, eps_aminotran_1, exosortase A system-associated amidotransferase 1 Back     alignment and domain information
>gnl|CDD|222208 pfam13537, GATase_7, Glutamine amidotransferase domain Back     alignment and domain information
>gnl|CDD|234108 TIGR03104, trio_amidotrans, asparagine synthase family amidotransferase Back     alignment and domain information
>gnl|CDD|238212 cd00352, Gn_AT_II, Glutamine amidotransferases class-II (GATase) Back     alignment and domain information
>gnl|CDD|222195 pfam13522, GATase_6, Glutamine amidotransferase domain Back     alignment and domain information
>gnl|CDD|215851 pfam00310, GATase_2, Glutamine amidotransferases class-II Back     alignment and domain information
>gnl|CDD|239735 cd03766, Gn_AT_II_novel, Gn_AT_II_novel Back     alignment and domain information
>gnl|CDD|223112 COG0034, PurF, Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|238366 cd00714, GFAT, Glutamine amidotransferases class-II (Gn-AT)_GFAT-type Back     alignment and domain information
>gnl|CDD|238891 cd01910, Wali7, This domain is present in Wali7, a protein of unknown function, expressed in wheat and induced by aluminum Back     alignment and domain information
>gnl|CDD|221596 pfam12481, DUF3700, Aluminium induced protein Back     alignment and domain information
>gnl|CDD|130205 TIGR01135, glmS, glucosamine--fructose-6-phosphate aminotransferase (isomerizing) Back     alignment and domain information
>gnl|CDD|223526 COG0449, GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|233285 TIGR01134, purF, amidophosphoribosyltransferase Back     alignment and domain information
>gnl|CDD|236384 PRK09123, PRK09123, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|234729 PRK00331, PRK00331, glucosamine--fructose-6-phosphate aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|215241 PLN02440, PLN02440, amidophosphoribosyltransferase Back     alignment and domain information
>gnl|CDD|238367 cd00715, GPATase_N, Glutamine amidotransferases class-II (GN-AT)_GPAT- type Back     alignment and domain information
>gnl|CDD|181395 PRK08341, PRK08341, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|235984 PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|238888 cd01907, GlxB, Glutamine amidotransferases class-II (Gn-AT)_GlxB-type Back     alignment and domain information
>gnl|CDD|181061 PRK07631, PRK07631, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|240349 PTZ00295, PTZ00295, glucosamine-fructose-6-phosphate aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|235611 PRK05793, PRK05793, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|238890 cd01909, betaLS_CarA_N, Glutamine amidotransferases class-II (GATase) asparagine synthase_betaLS-type Back     alignment and domain information
>gnl|CDD|238944 cd01986, Alpha_ANH_like, Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases and ATP sulphurylases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 420
PRK09431 554 asnB asparagine synthetase B; Provisional 100.0
PLN02549 578 asparagine synthase (glutamine-hydrolyzing) 100.0
PTZ00077 586 asparagine synthetase-like protein; Provisional 100.0
KOG0571 543 consensus Asparagine synthase (glutamine-hydrolyzi 100.0
TIGR03104589 trio_amidotrans asparagine synthase family amidotr 100.0
COG0367 542 AsnB Asparagine synthase (glutamine-hydrolyzing) [ 100.0
TIGR01536467 asn_synth_AEB asparagine synthase (glutamine-hydro 100.0
TIGR03108 628 eps_aminotran_1 exosortase 1 system-associated ami 100.0
KOG0573520 consensus Asparagine synthase [Amino acid transpor 100.0
cd00712220 AsnB Glutamine amidotransferases class-II (GATase) 100.0
cd03766181 Gn_AT_II_novel Gn_AT_II_novel. This asparagine syn 100.0
PRK08525445 amidophosphoribosyltransferase; Provisional 100.0
PRK07631475 amidophosphoribosyltransferase; Provisional 100.0
PRK09123479 amidophosphoribosyltransferase; Provisional 100.0
PRK06388474 amidophosphoribosyltransferase; Provisional 100.0
PRK07272484 amidophosphoribosyltransferase; Provisional 100.0
cd00714215 GFAT Glutamine amidotransferases class-II (Gn-AT)_ 100.0
PRK07349500 amidophosphoribosyltransferase; Provisional 100.0
PRK06781471 amidophosphoribosyltransferase; Provisional 100.0
PRK08341442 amidophosphoribosyltransferase; Provisional 100.0
PRK07847510 amidophosphoribosyltransferase; Provisional 100.0
cd01991269 Asn_Synthase_B_C The C-terminal domain of Asparagi 100.0
PLN02440479 amidophosphoribosyltransferase 100.0
PRK05793469 amidophosphoribosyltransferase; Provisional 100.0
PF00733255 Asn_synthase: Asparagine synthase; InterPro: IPR00 100.0
cd00715252 GPATase_N Glutamine amidotransferases class-II (GN 100.0
PRK00331 604 glucosamine--fructose-6-phosphate aminotransferase 100.0
cd01907249 GlxB Glutamine amidotransferases class-II (Gn-AT)_ 100.0
PRK09246501 amidophosphoribosyltransferase; Provisional 100.0
TIGR01134442 purF amidophosphoribosyltransferase. Alternate nam 100.0
TIGR01135 607 glmS glucosamine--fructose-6-phosphate aminotransf 99.98
cd01909199 betaLS_CarA_N Glutamine amidotransferases class-II 99.97
cd00352220 Gn_AT_II Glutamine amidotransferases class-II (GAT 99.97
PTZ00295 640 glucosamine-fructose-6-phosphate aminotransferase; 99.97
COG0034470 PurF Glutamine phosphoribosylpyrophosphate amidotr 99.96
cd01910224 Wali7 This domain is present in Wali7, a protein o 99.96
PF13537125 GATase_7: Glutamine amidotransferase domain; PDB: 99.96
PTZ00394 670 glucosamine-fructose-6-phosphate aminotransferase; 99.96
PLN02981 680 glucosamine:fructose-6-phosphate aminotransferase 99.96
KOG0572474 consensus Glutamine phosphoribosylpyrophosphate am 99.95
PF13522133 GATase_6: Glutamine amidotransferase domain 99.94
COG0449 597 GlmS Glucosamine 6-phosphate synthetase, contains 99.94
TIGR03442251 conserved hypothetical protein TIGR03442. Members 99.81
KOG1268 670 consensus Glucosamine 6-phosphate synthetases, con 99.76
cd01908257 YafJ Glutamine amidotransferases class-II (Gn-AT)_ 99.73
PF00310361 GATase_2: Glutamine amidotransferases class-II; In 99.73
cd00713413 GltS Glutamine amidotransferases class-II (Gn-AT), 99.71
cd01996154 Alpha_ANH_like_III This is a subfamily of Adenine 99.51
PF12481228 DUF3700: Aluminium induced protein ; InterPro: IPR 99.5
TIGR03573343 WbuX N-acetyl sugar amidotransferase. This enzyme 99.43
COG0067371 GltB Glutamate synthase domain 1 [Amino acid trans 99.24
COG1606269 ATP-utilizing enzymes of the PP-loop superfamily [ 99.17
PRK11750 1485 gltB glutamate synthase subunit alpha; Provisional 99.16
TIGR00268252 conserved hypothetical protein TIGR00268. The N-te 99.16
PRK14561194 hypothetical protein; Provisional 99.11
PF13230271 GATase_4: Glutamine amidotransferases class-II; PD 99.07
cd00553248 NAD_synthase NAD+ synthase is a homodimer, which c 99.05
cd01990202 Alpha_ANH_like_I This is a subfamily of Adenine nu 99.02
PRK13980265 NAD synthetase; Provisional 99.02
TIGR00552250 nadE NAD+ synthetase. NAD+ synthetase is a nearly 98.99
PRK00143 346 mnmA tRNA-specific 2-thiouridylase MnmA; Reviewed 98.95
COG0482 356 TrmU Predicted tRNA(5-methylaminomethyl-2-thiourid 98.93
COG0603222 Predicted PP-loop superfamily ATPase [General func 98.92
cd01998 349 tRNA_Me_trans tRNA methyl transferase. This family 98.92
PF06508209 QueC: Queuosine biosynthesis protein QueC; InterPr 98.92
PRK11106231 queuosine biosynthesis protein QueC; Provisional 98.91
PRK00876 326 nadE NAD synthetase; Reviewed 98.91
PF03054 356 tRNA_Me_trans: tRNA methyl transferase; InterPro: 98.9
PRK14665 360 mnmA tRNA-specific 2-thiouridylase MnmA; Provision 98.9
cd01993185 Alpha_ANH_like_II This is a subfamily of Adenine n 98.88
PRK04527 400 argininosuccinate synthase; Provisional 98.79
PRK14664 362 tRNA-specific 2-thiouridylase MnmA; Provisional 98.79
TIGR00420 352 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-me 98.77
TIGR00364201 exsB protein. This protein family is represented b 98.76
PRK00509 399 argininosuccinate synthase; Provisional 98.76
cd01712177 ThiI ThiI is required for thiazole synthesis in th 98.73
PTZ00323294 NAD+ synthase; Provisional 98.69
TIGR00884 311 guaA_Cterm GMP synthase (glutamine-hydrolyzing), C 98.67
PRK00919 307 GMP synthase subunit B; Validated 98.65
PRK10696258 tRNA 2-thiocytidine biosynthesis protein TtcA; Pro 98.64
PF09147201 DUF1933: Domain of unknown function (DUF1933); Int 98.61
PRK13820 394 argininosuccinate synthase; Provisional 98.59
PF02540242 NAD_synthase: NAD synthase; InterPro: IPR022310 NA 98.59
PRK08349198 hypothetical protein; Validated 98.58
TIGR02432189 lysidine_TilS_N tRNA(Ile)-lysidine synthetase, N-t 98.55
cd01999 385 Argininosuccinate_Synthase Argininosuccinate synth 98.54
PLN00200 404 argininosuccinate synthase; Provisional 98.53
cd01997 295 GMP_synthase_C The C-terminal domain of GMP synthe 98.5
PRK00074 511 guaA GMP synthase; Reviewed 98.46
PRK13981540 NAD synthetase; Provisional 98.45
cd01986103 Alpha_ANH_like Adenine nucleotide alpha hydrolases 98.45
COG0037298 MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle 98.44
PRK00768268 nadE NAD synthetase; Reviewed 98.43
KOG2805 377 consensus tRNA (5-methylaminomethyl-2-thiouridylat 98.42
PRK01565394 thiamine biosynthesis protein ThiI; Provisional 98.41
cd01992185 PP-ATPase N-terminal domain of predicted ATPase of 98.39
TIGR00032 394 argG argininosuccinate synthase. argG in bacteria, 98.39
PRK08384381 thiamine biosynthesis protein ThiI; Provisional 98.37
cd01994194 Alpha_ANH_like_IV This is a subfamily of Adenine n 98.34
PLN02347 536 GMP synthetase 98.34
TIGR00342371 thiazole biosynthesis/tRNA modification protein Th 98.32
TIGR03679218 arCOG00187 arCOG00187 universal archaeal metal-bin 98.3
PF01171182 ATP_bind_3: PP-loop family; InterPro: IPR011063 Th 98.29
COG2117198 Predicted subunit of tRNA(5-methylaminomethyl-2-th 98.24
cd01995169 ExsB ExsB is a transcription regulator related pro 98.21
PRK02628 679 nadE NAD synthetase; Reviewed 98.17
PRK01269 482 tRNA s(4)U8 sulfurtransferase; Provisional 98.17
cd01713173 PAPS_reductase This domain is found in phosphoaden 98.14
PRK05253301 sulfate adenylyltransferase subunit 2; Provisional 98.05
PF02568197 ThiI: Thiamine biosynthesis protein (ThiI); InterP 98.05
PF00764 388 Arginosuc_synth: Arginosuccinate synthase; InterPr 97.99
COG0121252 Predicted glutamine amidotransferase [General func 97.94
PRK05370 447 argininosuccinate synthase; Validated 97.91
PRK10660 436 tilS tRNA(Ile)-lysidine synthetase; Provisional 97.88
COG1365255 Predicted ATPase (PP-loop superfamily) [General fu 97.88
COG0171268 NadE NAD synthase [Coenzyme metabolism] 97.86
PRK08576438 hypothetical protein; Provisional 97.85
COG0137 403 ArgG Argininosuccinate synthase [Amino acid transp 97.82
PLN02339 700 NAD+ synthase (glutamine-hydrolysing) 97.51
TIGR02039294 CysD sulfate adenylyltransferase, small subunit. I 97.4
KOG0399 2142 consensus Glutamate synthase [Amino acid transport 97.32
COG0519 315 GuaA GMP synthase, PP-ATPase domain/subunit [Nucle 97.23
COG0301383 ThiI Thiamine biosynthesis ATP pyrophosphatase [Co 97.2
PRK02090241 phosphoadenosine phosphosulfate reductase; Provisi 97.18
TIGR00289222 conserved hypothetical protein TIGR00289. Homologo 97.06
PRK08557417 hypothetical protein; Provisional 97.05
PF01507174 PAPS_reduct: Phosphoadenosine phosphosulfate reduc 97.0
PRK12563312 sulfate adenylyltransferase subunit 2; Provisional 96.85
KOG1706 412 consensus Argininosuccinate synthase [Amino acid t 96.82
PRK13795 636 hypothetical protein; Provisional 96.67
TIGR02057226 PAPS_reductase phosphoadenosine phosphosulfate red 96.31
cd0198486 AANH_like Adenine nucleotide alpha hydrolases supe 96.3
PRK13794479 hypothetical protein; Provisional 96.3
TIGR00434212 cysH phosophoadenylyl-sulfate reductase (thioredox 96.06
PRK06850 507 hypothetical protein; Provisional 95.79
TIGR03183 447 DNA_S_dndC putative sulfurtransferase DndC. Member 95.49
COG0175261 CysH 3'-phosphoadenosine 5'-phosphosulfate sulfotr 95.43
COG3969 407 Predicted phosphoadenosine phosphosulfate sulfotra 95.23
KOG1622 552 consensus GMP synthase [Nucleotide transport and m 95.11
COG2102223 Predicted ATPases of PP-loop superfamily [General 93.72
PF01902218 ATP_bind_4: ATP-binding region; InterPro: IPR00276 91.66
TIGR00290223 MJ0570_dom MJ0570-related uncharacterized domain. 90.76
KOG2303 706 consensus Predicted NAD synthase, contains CN hydr 83.18
KOG2840347 consensus Uncharacterized conserved protein with s 80.9
>PRK09431 asnB asparagine synthetase B; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.3e-93  Score=727.67  Aligned_cols=417  Identities=59%  Similarity=1.031  Sum_probs=373.5

Q ss_pred             CEEEEEEEcCCCCchHHHHHHHHHHHhcccCCCCCCceEEeCCeEEEEeeeeecCCCCCCCCeeecCCcEEEEEeeEEcC
Q 014715            1 MCGILAVLGCSDDSQAKRVRVLELSRRLKHRGPDWSGLYQHGDFYLAHQRLAIIDPASGDQPLYNEDKKIVVTVNGEIYN   80 (420)
Q Consensus         1 McGI~G~~~~~~~~~~~~~~~~~~~~~l~~RGpd~~g~~~~~~~~l~h~rl~~~~~~~~~qP~~~~~~~~~~~~nG~i~n   80 (420)
                      ||||+|+++.+.........+.+|++.|+|||||++|++..+++.|||+||+|+|...+.||+.+.++++++++||||||
T Consensus         1 MCGI~g~~~~~~~~~~~~~~~~~m~~~l~hRGPD~~g~~~~~~~~lgh~RLsIid~~~g~QP~~~~~~~~~lv~NGEIyN   80 (554)
T PRK09431          1 MCGIFGILDIKTDADELRKKALEMSRLMRHRGPDWSGIYASDNAILGHERLSIVDVNGGAQPLYNEDGTHVLAVNGEIYN   80 (554)
T ss_pred             CceEEEEEcCCCcchhHHHHHHHHHHHhhCCCCCcCCEEEeCCeEEEEEEeeecCCCCCCCCCCcCCCCEEEEEEEEEec
Confidence            99999999765433212456889999999999999999999999999999999998789999999999999999999999


Q ss_pred             hHHHHHHh-cCCCccCCChHHHHHHHHHHHhHHHhhhccCceEEEEEECCCCEEEEEEcCCCCccEEEEEecCcEEEEee
Q 014715           81 HEALRERL-TNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISS  159 (420)
Q Consensus        81 ~~~L~~~l-~~~~~~~~~d~e~l~~~~~~~g~~~~~~l~G~fa~v~~d~~~~~l~~~rD~~G~~pLyy~~~~~~~~~faS  159 (420)
                      +.+|+++| ..+.|++.||+|+|+++|++||.+++++|+|+|||++||.++++++++||++|+|||||++..++.++|||
T Consensus        81 ~~eLr~~L~~~~~f~t~sD~Evil~ly~~~G~~~~~~L~G~FAf~i~D~~~~~l~laRD~~GikPLyy~~~~~~~~~faS  160 (554)
T PRK09431         81 HQELRAELGDKYAFQTGSDCEVILALYQEKGPDFLDDLDGMFAFALYDSEKDAYLIARDPIGIIPLYYGYDEHGNLYFAS  160 (554)
T ss_pred             HHHHHHHHhccCCcCCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEEECCCCEEEEEeCCCCCcceEEEEeCCCeEEEec
Confidence            99999999 45788999999999999999999999999999999999999999999999999999999886448899999


Q ss_pred             CccccccccccceeeCCCcEEEccCCeeEEeeCCCCCCC-CCCCCCCcHHHHHHHHHHHhhhhcccccceeEEecCCcch
Q 014715          160 ELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSE-AIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDS  238 (420)
Q Consensus       160 e~~~l~~~~~~i~~l~pG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~aV~~rl~~~~~v~~~LSGGlDS  238 (420)
                      |+++|...+++|++|||||++.+..++..+||++.|... ..++.++.+++++++|.+||++|+.+++|+|++||||+||
T Consensus       161 E~kaL~~~~~~I~~lpPGh~l~~~~g~~~~y~~~~~~~~~~~~~~~~~~~~lr~~L~~aV~~rl~sdvpvGv~LSGGLDS  240 (554)
T PRK09431        161 EMKALVPVCKTIKEFPPGHYYWSKDGEFVRYYQRDWFDYDAVKDNVTDKNELRDALEAAVKKRLMSDVPYGVLLSGGLDS  240 (554)
T ss_pred             chHHHHHhcCCEEEECCCeEEEECCCcEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHhcCCCceEEEcCCCccH
Confidence            999999999999999999999877667889999876432 2223345678999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccccc----ccccCCcceeEEeecCCCCcHHHHHHHHHHhCCCceEEEechhhhHHHHHHHHHhhccCC
Q 014715          239 SLVASITARHLAGTKA----ARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHVETYD  314 (420)
Q Consensus       239 s~iaa~~~~~~~~~~~----~~~~~~~~~~~t~~~~~~~d~~~A~~vA~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (420)
                      |+||+++++...+...    ...|..+++|||+++++++|..+|+++|+++|++||++.++.+++++.++++++++++++
T Consensus       241 SlIaala~~~~~~~~~~~~~~~~~~~~l~tfsig~~~~~D~~~A~~vA~~lg~~h~~v~~t~~e~~~~l~~vi~~le~~d  320 (554)
T PRK09431        241 SLISAIAKKYAARRIEDDERSEAWWPQLHSFAVGLEGSPDLKAAREVADHLGTVHHEIHFTVQEGLDALRDVIYHLETYD  320 (554)
T ss_pred             HHHHHHHHHhhcccccccccccccCCCceEEEEeCCCCChHHHHHHHHHHhCCccEEEEeCHHHHHHHHHHHHHHHhccC
Confidence            9999999887532100    001223699999999999999999999999999999999999999999999999999988


Q ss_pred             cccccchhHHHHHHHHHHhcCCEEEEeccCCcccccccccccCCCChhHHhHHHHHHHHHhhhcccchhhHHHhhcCccc
Q 014715          315 VTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEA  394 (420)
Q Consensus       315 ~~~~~~~~~~~~l~~~a~~~g~~v~ltG~GgDelf~Gy~~~~~~~~~~~~~~e~~~~~~~l~~~~l~r~dr~~~~~gie~  394 (420)
                      ++.+++++++|++++.+++.|++|+|||+|||||||||.+|+.+|+...+..+..+++.+++..+|.|.||++|+||+|+
T Consensus       321 p~~~~~~~p~yll~~~~~~~gvkvvLsGeGaDElFgGY~~~~~~p~~~~~~~e~~~~~~~l~~~~l~r~Dr~~ma~glE~  400 (554)
T PRK09431        321 VTTIRASTPMYLMARKIKAMGIKMVLSGEGADELFGGYLYFHKAPNAKEFHEETVRKLRALHMYDCLRANKAMMAWGVEA  400 (554)
T ss_pred             CccchhHHHHHHHHHHHHHcCCEEEEecCchhhhhcCchhhhhCCChhhcCHHHHHHHHHHHHHhhhccchhhhhcCcee
Confidence            77788889999999998888999999999999999999999887776667788888888999899999999999999999


Q ss_pred             ccCcCCHHHHHHHHcCCcccccc
Q 014715          395 RVPFLDKDFINVAMAIDPEWKMV  417 (420)
Q Consensus       395 r~PfLd~~lv~~a~~lP~~~k~~  417 (420)
                      |+||||++||+++++||+++|+.
T Consensus       401 RvPFLD~~lv~~a~~ip~~~K~~  423 (554)
T PRK09431        401 RVPFLDKEFLDVAMRINPEDKMC  423 (554)
T ss_pred             ecCcCCHHHHHHHHhCCHHHHhc
Confidence            99999999999999999999985

>PLN02549 asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information
>PTZ00077 asparagine synthetase-like protein; Provisional Back     alignment and domain information
>KOG0571 consensus Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR03104 trio_amidotrans asparagine synthase family amidotransferase Back     alignment and domain information
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information
>TIGR03108 eps_aminotran_1 exosortase 1 system-associated amidotransferase 1 Back     alignment and domain information
>KOG0573 consensus Asparagine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>cd00712 AsnB Glutamine amidotransferases class-II (GATase) asparagine synthase_B type Back     alignment and domain information
>cd03766 Gn_AT_II_novel Gn_AT_II_novel Back     alignment and domain information
>PRK08525 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK07631 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK09123 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK06388 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK07272 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>cd00714 GFAT Glutamine amidotransferases class-II (Gn-AT)_GFAT-type Back     alignment and domain information
>PRK07349 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK06781 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK08341 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK07847 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>cd01991 Asn_Synthase_B_C The C-terminal domain of Asparagine Synthase B Back     alignment and domain information
>PLN02440 amidophosphoribosyltransferase Back     alignment and domain information
>PRK05793 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PF00733 Asn_synthase: Asparagine synthase; InterPro: IPR001962 This domain is always found associated with (IPR000583 from INTERPRO) Back     alignment and domain information
>cd00715 GPATase_N Glutamine amidotransferases class-II (GN-AT)_GPAT- type Back     alignment and domain information
>PRK00331 glucosamine--fructose-6-phosphate aminotransferase; Reviewed Back     alignment and domain information
>cd01907 GlxB Glutamine amidotransferases class-II (Gn-AT)_GlxB-type Back     alignment and domain information
>PRK09246 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>TIGR01134 purF amidophosphoribosyltransferase Back     alignment and domain information
>TIGR01135 glmS glucosamine--fructose-6-phosphate aminotransferase (isomerizing) Back     alignment and domain information
>cd01909 betaLS_CarA_N Glutamine amidotransferases class-II (GATase) asparagine synthase_betaLS-type Back     alignment and domain information
>cd00352 Gn_AT_II Glutamine amidotransferases class-II (GATase) Back     alignment and domain information
>PTZ00295 glucosamine-fructose-6-phosphate aminotransferase; Provisional Back     alignment and domain information
>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>cd01910 Wali7 This domain is present in Wali7, a protein of unknown function, expressed in wheat and induced by aluminum Back     alignment and domain information
>PF13537 GATase_7: Glutamine amidotransferase domain; PDB: 1JGT_A 1M1Z_B 1MB9_B 1MBZ_B 1MC1_A Back     alignment and domain information
>PTZ00394 glucosamine-fructose-6-phosphate aminotransferase; Provisional Back     alignment and domain information
>PLN02981 glucosamine:fructose-6-phosphate aminotransferase Back     alignment and domain information
>KOG0572 consensus Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>PF13522 GATase_6: Glutamine amidotransferase domain Back     alignment and domain information
>COG0449 GlmS Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR03442 conserved hypothetical protein TIGR03442 Back     alignment and domain information
>KOG1268 consensus Glucosamine 6-phosphate synthetases, contain amidotransferase and phosphosugar isomerase domains [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd01908 YafJ Glutamine amidotransferases class-II (Gn-AT)_YafJ-type Back     alignment and domain information
>PF00310 GATase_2: Glutamine amidotransferases class-II; InterPro: IPR000583 A large group of biosynthetic enzymes are able to catalyse the removal of the ammonia group from glutamine and then to transfer this group to a substrate to form a new carbon-nitrogen group Back     alignment and domain information
>cd00713 GltS Glutamine amidotransferases class-II (Gn-AT), glutamate synthase (GltS)-type Back     alignment and domain information
>cd01996 Alpha_ANH_like_III This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>PF12481 DUF3700: Aluminium induced protein ; InterPro: IPR024286 This entry represents a domain found in plant proteins that is approximately 120 amino acids in length Back     alignment and domain information
>TIGR03573 WbuX N-acetyl sugar amidotransferase Back     alignment and domain information
>COG0067 GltB Glutamate synthase domain 1 [Amino acid transport and metabolism] Back     alignment and domain information
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only] Back     alignment and domain information
>PRK11750 gltB glutamate synthase subunit alpha; Provisional Back     alignment and domain information
>TIGR00268 conserved hypothetical protein TIGR00268 Back     alignment and domain information
>PRK14561 hypothetical protein; Provisional Back     alignment and domain information
>PF13230 GATase_4: Glutamine amidotransferases class-II; PDB: 3MDN_D Back     alignment and domain information
>cd00553 NAD_synthase NAD+ synthase is a homodimer, which catalyzes the final step in de novo nicotinamide adenine dinucleotide (NAD+) biosynthesis, an amide transfer from either ammonia or glutamine to nicotinic acid adenine dinucleotide (NaAD) Back     alignment and domain information
>cd01990 Alpha_ANH_like_I This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>PRK13980 NAD synthetase; Provisional Back     alignment and domain information
>TIGR00552 nadE NAD+ synthetase Back     alignment and domain information
>PRK00143 mnmA tRNA-specific 2-thiouridylase MnmA; Reviewed Back     alignment and domain information
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0603 Predicted PP-loop superfamily ATPase [General function prediction only] Back     alignment and domain information
>cd01998 tRNA_Me_trans tRNA methyl transferase Back     alignment and domain information
>PF06508 QueC: Queuosine biosynthesis protein QueC; InterPro: IPR018317 This protein family is represented by a single member in nearly every completed large (> 1000 genes) prokaryotic genome Back     alignment and domain information
>PRK11106 queuosine biosynthesis protein QueC; Provisional Back     alignment and domain information
>PRK00876 nadE NAD synthetase; Reviewed Back     alignment and domain information
>PF03054 tRNA_Me_trans: tRNA methyl transferase; InterPro: IPR004506 tRNA-specific 2-thiouridylase catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 Back     alignment and domain information
>PRK14665 mnmA tRNA-specific 2-thiouridylase MnmA; Provisional Back     alignment and domain information
>cd01993 Alpha_ANH_like_II This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>PRK04527 argininosuccinate synthase; Provisional Back     alignment and domain information
>PRK14664 tRNA-specific 2-thiouridylase MnmA; Provisional Back     alignment and domain information
>TIGR00420 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Back     alignment and domain information
>TIGR00364 exsB protein Back     alignment and domain information
>PRK00509 argininosuccinate synthase; Provisional Back     alignment and domain information
>cd01712 ThiI ThiI is required for thiazole synthesis in the thiamine biosynthesis pathway Back     alignment and domain information
>PTZ00323 NAD+ synthase; Provisional Back     alignment and domain information
>TIGR00884 guaA_Cterm GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit Back     alignment and domain information
>PRK00919 GMP synthase subunit B; Validated Back     alignment and domain information
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional Back     alignment and domain information
>PF09147 DUF1933: Domain of unknown function (DUF1933); InterPro: IPR015230 This domain is predominantly found in carbapenam synthetase, and is composed of two antiparallel six-stranded beta-sheets that form a sandwich, flanked on each side by two alpha-helices Back     alignment and domain information
>PRK13820 argininosuccinate synthase; Provisional Back     alignment and domain information
>PF02540 NAD_synthase: NAD synthase; InterPro: IPR022310 NAD+ synthase (6 Back     alignment and domain information
>PRK08349 hypothetical protein; Validated Back     alignment and domain information
>TIGR02432 lysidine_TilS_N tRNA(Ile)-lysidine synthetase, N-terminal domain Back     alignment and domain information
>cd01999 Argininosuccinate_Synthase Argininosuccinate synthase Back     alignment and domain information
>PLN00200 argininosuccinate synthase; Provisional Back     alignment and domain information
>cd01997 GMP_synthase_C The C-terminal domain of GMP synthetase Back     alignment and domain information
>PRK00074 guaA GMP synthase; Reviewed Back     alignment and domain information
>PRK13981 NAD synthetase; Provisional Back     alignment and domain information
>cd01986 Alpha_ANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases and ATP sulphurylases Back     alignment and domain information
>COG0037 MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PRK00768 nadE NAD synthetase; Reviewed Back     alignment and domain information
>KOG2805 consensus tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK01565 thiamine biosynthesis protein ThiI; Provisional Back     alignment and domain information
>cd01992 PP-ATPase N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning] Back     alignment and domain information
>TIGR00032 argG argininosuccinate synthase Back     alignment and domain information
>PRK08384 thiamine biosynthesis protein ThiI; Provisional Back     alignment and domain information
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>PLN02347 GMP synthetase Back     alignment and domain information
>TIGR00342 thiazole biosynthesis/tRNA modification protein ThiI Back     alignment and domain information
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein Back     alignment and domain information
>PF01171 ATP_bind_3: PP-loop family; InterPro: IPR011063 This entry represents the PP-loop motif superfamily [,] Back     alignment and domain information
>COG2117 Predicted subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd01995 ExsB ExsB is a transcription regulator related protein Back     alignment and domain information
>PRK02628 nadE NAD synthetase; Reviewed Back     alignment and domain information
>PRK01269 tRNA s(4)U8 sulfurtransferase; Provisional Back     alignment and domain information
>cd01713 PAPS_reductase This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase Back     alignment and domain information
>PRK05253 sulfate adenylyltransferase subunit 2; Provisional Back     alignment and domain information
>PF02568 ThiI: Thiamine biosynthesis protein (ThiI); InterPro: IPR020536 Thiamine pyrophosphate (TPP) is synthesized de novo in many bacteria and is a required cofactor for many enzymes in the cell Back     alignment and domain information
>PF00764 Arginosuc_synth: Arginosuccinate synthase; InterPro: IPR001518 Argininosuccinate synthase (6 Back     alignment and domain information
>COG0121 Predicted glutamine amidotransferase [General function prediction only] Back     alignment and domain information
>PRK05370 argininosuccinate synthase; Validated Back     alignment and domain information
>PRK10660 tilS tRNA(Ile)-lysidine synthetase; Provisional Back     alignment and domain information
>COG1365 Predicted ATPase (PP-loop superfamily) [General function prediction only] Back     alignment and domain information
>COG0171 NadE NAD synthase [Coenzyme metabolism] Back     alignment and domain information
>PRK08576 hypothetical protein; Provisional Back     alignment and domain information
>COG0137 ArgG Argininosuccinate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PLN02339 NAD+ synthase (glutamine-hydrolysing) Back     alignment and domain information
>TIGR02039 CysD sulfate adenylyltransferase, small subunit Back     alignment and domain information
>KOG0399 consensus Glutamate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>COG0519 GuaA GMP synthase, PP-ATPase domain/subunit [Nucleotide transport and metabolism] Back     alignment and domain information
>COG0301 ThiI Thiamine biosynthesis ATP pyrophosphatase [Coenzyme metabolism] Back     alignment and domain information
>PRK02090 phosphoadenosine phosphosulfate reductase; Provisional Back     alignment and domain information
>TIGR00289 conserved hypothetical protein TIGR00289 Back     alignment and domain information
>PRK08557 hypothetical protein; Provisional Back     alignment and domain information
>PF01507 PAPS_reduct: Phosphoadenosine phosphosulfate reductase family; InterPro: IPR002500 This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase Back     alignment and domain information
>PRK12563 sulfate adenylyltransferase subunit 2; Provisional Back     alignment and domain information
>KOG1706 consensus Argininosuccinate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK13795 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02057 PAPS_reductase phosphoadenosine phosphosulfate reductase, thioredoxin dependent Back     alignment and domain information
>cd01984 AANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF) Back     alignment and domain information
>PRK13794 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00434 cysH phosophoadenylyl-sulfate reductase (thioredoxin) Back     alignment and domain information
>PRK06850 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03183 DNA_S_dndC putative sulfurtransferase DndC Back     alignment and domain information
>COG0175 CysH 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase [General function prediction only] Back     alignment and domain information
>KOG1622 consensus GMP synthase [Nucleotide transport and metabolism] Back     alignment and domain information
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only] Back     alignment and domain information
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal Back     alignment and domain information
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain Back     alignment and domain information
>KOG2303 consensus Predicted NAD synthase, contains CN hydrolase domain [Coenzyme transport and metabolism; General function prediction only] Back     alignment and domain information
>KOG2840 consensus Uncharacterized conserved protein with similarity to predicted ATPase of the PP-loop superfamily [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query420
1ct9_A 553 Crystal Structure Of Asparagine Synthetase B From E 1e-128
1q15_A503 Carbapenam Synthetase Length = 503 8e-11
1xff_A240 Glutaminase Domain Of Glucosamine 6-Phosphate Synth 3e-06
2j6h_A 608 E. Coli Glucosamine-6-p Synthase In Complex With Gl 3e-06
1jxa_A 608 Glucosamine 6-Phosphate Synthase With Glucose 6-Pho 3e-06
1gph_1465 Structure Of The Allosteric Regulatory Enzyme Of Pu 3e-05
1ao0_A459 Glutamine Phosphoribosylpyrophosphate (Prpp) Amidot 3e-05
3ooj_A 608 C1a Mutant Of E. Coli Glms In Complex With Glucose- 4e-05
1jgt_A513 Crystal Structure Of Beta-Lactam Synthetase Length 7e-04
>pdb|1CT9|A Chain A, Crystal Structure Of Asparagine Synthetase B From Escherichia Coli Length = 553 Back     alignment and structure 
Iteration: 1

 Score =  454 bits (1168), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 222/421 (52%), Positives = 293/421 (69%), Gaps = 6/421 (1%)
Query: 2   CGILAVLGCSDDSQAKRVRVLELSRRLKHRGPDWSGLYQHGDFYLAHQRLAIIDPASGDQ 61
             I  V     D+   R + LELSR ++HRGPDWSG+Y   +  LAH+RL+I+D  +G Q
Sbjct: 1   ASIFGVFDIKTDAVELRKKALELSRLMRHRGPDWSGIYASDNAILAHERLSIVDVNAGAQ 60
Query: 62  PLYNEDKKIVVTVNGEIYNHEALR-ERLTNHKFRTGSDCDVIAHLYEEYGENFVDMLDGM 120
           PLYN+ K  V+ VNGEIYNH+ALR E    ++F+TGSDC+VI  LY+E G  F+D L GM
Sbjct: 61  PLYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTGSDCEVILALYQEKGPEFLDDLQGM 120
Query: 121 FSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLY 180
           F+F L D+  +++++ RD +GI  LY+G+   G ++++SE+K L   C   + FP G   
Sbjct: 121 FAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVCRTIKEFPAGSYL 180
Query: 181 SSKSGGLKRWYNPTWYS-EAIPSTPYDPLVLRQAFENAVIKRLMTDVPFXXXXXXXXXXX 239
            S+ G ++ +Y+  W+  +A+     D   LRQA E++V   LM+DVP+           
Sbjct: 181 WSQDGEIRSYYHRDWFDYDAVKDNVTDKNELRQALEDSVKSHLMSDVPYGVLLSGGLDSS 240
Query: 240 XXXXIT----ARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFT 295
               IT    AR +   + +  W  QLHSF VGL GSPDLK A+EVA++LGTVHHE HFT
Sbjct: 241 IISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPGSPDLKAAQEVANHLGTVHHEIHFT 300
Query: 296 VQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYF 355
           VQ+G+DAI +VIYH+ETYDVTTIRASTPM+LMSRKIK++G+KMV+SGEGSDE+FGGYLYF
Sbjct: 301 VQEGLDAIRDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFGGYLYF 360
Query: 356 HKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWK 415
           HKAPN +E H ET  K+ ALH YDC RANK+ SAWG+EARVPFLDK F++VAM I+P+ K
Sbjct: 361 HKAPNAKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRINPQDK 420
Query: 416 M 416
           M
Sbjct: 421 M 421
>pdb|1Q15|A Chain A, Carbapenam Synthetase Length = 503 Back     alignment and structure
>pdb|1XFF|A Chain A, Glutaminase Domain Of Glucosamine 6-Phosphate Synthase Complexed With Glutamate Length = 240 Back     alignment and structure
>pdb|2J6H|A Chain A, E. Coli Glucosamine-6-p Synthase In Complex With Glucose-6p And 5-oxo-l-norleucine Length = 608 Back     alignment and structure
>pdb|1JXA|A Chain A, Glucosamine 6-Phosphate Synthase With Glucose 6-Phosphate Length = 608 Back     alignment and structure
>pdb|1GPH|1 Chain 1, Structure Of The Allosteric Regulatory Enzyme Of Purine Biosynthesis Length = 465 Back     alignment and structure
>pdb|1AO0|A Chain A, Glutamine Phosphoribosylpyrophosphate (Prpp) Amidotransferase From B. Subtilis Complexed With Adp And Gmp Length = 459 Back     alignment and structure
>pdb|3OOJ|A Chain A, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And Glutamate Length = 608 Back     alignment and structure
>pdb|1JGT|A Chain A, Crystal Structure Of Beta-Lactam Synthetase Length = 513 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query420
1ct9_A 553 Asparagine synthetase B; amidotransferase, substra 0.0
1q15_A503 CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, 1e-174
1jgt_A513 Beta-lactam synthetase; asparagine synthetase, cla 1e-170
1ao0_A459 Glutamine phosphoribosylpyrophosphate amidotransfe 3e-09
3k32_A203 Uncharacterized protein MJ0690; predicted subunit 4e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-08
1xff_A240 D-fructose-6-, glucosamine--fructose-6-phosphate a 8e-07
2bpl_A 608 Glucosamine--fructose-6-phosphate aminotransferase 6e-06
1ecf_A504 Glutamine phosphoribosylpyrophosphate amidotransf; 2e-05
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1 Length = 553 Back     alignment and structure
 Score =  551 bits (1421), Expect = 0.0
 Identities = 231/420 (55%), Positives = 307/420 (73%), Gaps = 6/420 (1%)

Query: 3   GILAVLGCSDDSQAKRVRVLELSRRLKHRGPDWSGLYQHGDFYLAHQRLAIIDPASGDQP 62
            I  V     D+   R + LELSR ++HRGPDWSG+Y   +  LAH+RL+I+D  +G QP
Sbjct: 2   SIFGVFDIKTDAVELRKKALELSRLMRHRGPDWSGIYASDNAILAHERLSIVDVNAGAQP 61

Query: 63  LYNEDKKIVVTVNGEIYNHEALRERL-TNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMF 121
           LYN+ K  V+ VNGEIYNH+ALR      ++F+TGSDC+VI  LY+E G  F+D L GMF
Sbjct: 62  LYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTGSDCEVILALYQEKGPEFLDDLQGMF 121

Query: 122 SFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYS 181
           +F L D+  +++++ RD +GI  LY+G+   G ++++SE+K L   C   + FP G    
Sbjct: 122 AFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVCRTIKEFPAGSYLW 181

Query: 182 SKSGGLKRWYNPTWYS-EAIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDSSL 240
           S+ G ++ +Y+  W+  +A+     D   LRQA E++V   LM+DVP+GVLLSGGLDSS+
Sbjct: 182 SQDGEIRSYYHRDWFDYDAVKDNVTDKNELRQALEDSVKSHLMSDVPYGVLLSGGLDSSI 241

Query: 241 VASITARHLA----GTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTV 296
           +++IT ++ A      + +  W  QLHSF VGL GSPDLK A+EVA++LGTVHHE HFTV
Sbjct: 242 ISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPGSPDLKAAQEVANHLGTVHHEIHFTV 301

Query: 297 QDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFH 356
           Q+G+DAI +VIYH+ETYDVTTIRASTPM+LMSRKIK++G+KMV+SGEGSDE+FGGYLYFH
Sbjct: 302 QEGLDAIRDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFGGYLYFH 361

Query: 357 KAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKM 416
           KAPN +E H ET  K+ ALH YDC RANK+ SAWG+EARVPFLDK F++VAM I+P+ KM
Sbjct: 362 KAPNAKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRINPQDKM 421
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A* Length = 503 Back     alignment and structure
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A* Length = 513 Back     alignment and structure
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1* Length = 459 Back     alignment and structure
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii} Length = 203 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1xff_A D-fructose-6-, glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; complex (transferase/inhibitor), glutamine amidotransferase; HET: GLU; 1.80A {Escherichia coli} SCOP: d.153.1.1 PDB: 1xfg_A* Length = 240 Back     alignment and structure
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A* Length = 608 Back     alignment and structure
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A* Length = 504 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query420
1ct9_A 553 Asparagine synthetase B; amidotransferase, substra 100.0
1q15_A503 CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, 100.0
1jgt_A513 Beta-lactam synthetase; asparagine synthetase, cla 100.0
1ao0_A459 Glutamine phosphoribosylpyrophosphate amidotransfe 100.0
1xff_A240 D-fructose-6-, glucosamine--fructose-6-phosphate a 100.0
1ecf_A504 Glutamine phosphoribosylpyrophosphate amidotransf; 100.0
2bpl_A 608 Glucosamine--fructose-6-phosphate aminotransferase 99.98
3mdn_A274 Glutamine aminotransferase class-II domain protei; 99.94
1te5_A257 Conserved hypothetical protein; glutamine amidotra 99.88
1ea0_A 1479 Glutamate synthase [NADPH] large chain; oxidoreduc 99.62
1ofd_A 1520 Ferredoxin-dependent glutamate synthase 2; oxidore 99.61
2e18_A257 NH(3)-dependent NAD(+) synthetase; ligase, structu 99.15
3bl5_A219 Queuosine biosynthesis protein QUEC; PREQ1 biosynt 99.12
1xng_A268 NH(3)-dependent NAD(+) synthetase; amidotransferas 99.09
1kqp_A271 NAD+ synthase, NH(3)-dependent NAD(+) synthetase, 99.09
2pg3_A232 Queuosine biosynthesis protein QUEC; YP_049261.1, 99.04
3k32_A203 Uncharacterized protein MJ0690; predicted subunit 99.0
3n05_A590 NH(3)-dependent NAD(+) synthetase; ligase, structu 98.99
3fiu_A249 NH(3)-dependent NAD(+) synthetase; rossman fold, a 98.92
3p52_A249 NH(3)-dependent NAD(+) synthetase; structural geno 98.89
1wxi_A275 NH(3)-dependent NAD(+) synthetase; NADE, E.coli, l 98.83
2hma_A 376 Probable tRNA (5-methylaminomethyl-2-thiouridylat 98.74
2dpl_A 308 GMP synthetase, GMP synthase [glutamine-hydrolyzin 98.72
2nz2_A 413 Argininosuccinate synthase; amino-acid biosynthesi 98.72
1kor_A 400 Argininosuccinate synthetase; ligase, riken struct 98.71
1vl2_A 421 Argininosuccinate synthase; TM1780, structural gen 98.71
1wy5_A 317 TILS, hypothetical UPF0072 protein AQ_1887; N-type 98.7
2der_A 380 TRNA-specific 2-thiouridylase MNMA; protein-RNA co 98.62
1k92_A 455 Argininosuccinate synthase, argininosuccinate SY; 98.54
3q4g_A279 NH(3)-dependent NAD(+) synthetase; structural geno 98.49
3a2k_A 464 TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, 98.36
1gpm_A 525 GMP synthetase, XMP aminase; class I glutamine ami 98.28
3tqi_A 527 GMP synthase [glutamine-hydrolyzing]; ligase; 2.84 98.27
3dpi_A285 NAD+ synthetase; ssgcid, decode, structural genomi 98.24
2ywb_A 503 GMP synthase [glutamine-hydrolyzing]; GMP syntheta 98.23
1sur_A215 PAPS reductase; assimilatory sulfate reduction, 3- 98.21
2c5s_A413 THII, probable thiamine biosynthesis protein THII; 98.17
3ilv_A634 Glutamine-dependent NAD(+) synthetase; protein str 98.17
2vxo_A 697 GMP synthase [glutamine-hydrolyzing]; proto-oncoge 98.13
3sdb_A 680 Glutamine-dependent NAD(+) synthetase; glutamine-a 98.1
1ni5_A 433 Putative cell cycle protein MESJ; structural genom 98.0
3uow_A 556 GMP synthetase; structural genomics consortium, SG 98.0
4f4h_A565 Glutamine dependent NAD+ synthetase; structural ge 97.95
3rjz_A237 N-type ATP pyrophosphatase superfamily; structural 97.91
2o8v_A252 Phosphoadenosine phosphosulfate reductase; disulfi 97.86
1zun_A325 Sulfate adenylyltransferase subunit 2; beta barrel 97.81
2oq2_A261 Phosphoadenosine phosphosulfate reductase; sulfate 97.69
1vbk_A307 Hypothetical protein PH1313; structural genomics, 97.55
2goy_A275 Adenosine phosphosulfate reductase; iron sulfur cl 96.69
2wsi_A306 FAD synthetase; transferase, nucleotidyltransferas 96.28
3fwk_A308 FMN adenylyltransferase; FAD biosynthesis, alpha/b 93.21
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1 Back     alignment and structure
Probab=100.00  E-value=1.6e-86  Score=679.93  Aligned_cols=416  Identities=56%  Similarity=0.974  Sum_probs=368.8

Q ss_pred             EEEEEEEcCCCCchHHHHHHHHHHHhcccCCCCCCceEEeCCeEEEEeeeeecCCCCCCCCeeecCCcEEEEEeeEEcCh
Q 014715            2 CGILAVLGCSDDSQAKRVRVLELSRRLKHRGPDWSGLYQHGDFYLAHQRLAIIDPASGDQPLYNEDKKIVVTVNGEIYNH   81 (420)
Q Consensus         2 cGI~G~~~~~~~~~~~~~~~~~~~~~l~~RGpd~~g~~~~~~~~l~h~rl~~~~~~~~~qP~~~~~~~~~~~~nG~i~n~   81 (420)
                      |||+|+++.+.........+.+|+..|+|||||++|++..+++++||+||+|+|...+.||+.+.+++++++|||+|||+
T Consensus         1 CGI~G~~~~~~~~~~~~~~~~~m~~~l~hRGpD~~G~~~~~~~~lgh~Rlsi~~~~~~~QP~~~~~~~~~lv~NGeIyN~   80 (553)
T 1ct9_A            1 ASIFGVFDIKTDAVELRKKALELSRLMRHRGPDWSGIYASDNAILAHERLSIVDVNAGAQPLYNQQKTHVLAVNGEIYNH   80 (553)
T ss_dssp             CEEEEEESCCSCHHHHHHHHHHHHHTTGGGCBTEEEEEECSSEEEEEEECCCSCTTTCCSSEECTTSCEEEEEEEEETTH
T ss_pred             CEEEEEEcCCCcchhHHHHHHHHHHHHhccCCCcccEEEECCEEEEEEeeeeeCCCCCCCCeEeCCCCEEEEEEEEEECH
Confidence            99999998654422335667899999999999999999999999999999999977789999988889999999999999


Q ss_pred             HHHHHHh-cCCCccCCChHHHHHHHHHHHhHHHhhhccCceEEEEEECCCCEEEEEEcCCCCccEEEEEecCcEEEEeeC
Q 014715           82 EALRERL-TNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSE  160 (420)
Q Consensus        82 ~~L~~~l-~~~~~~~~~d~e~l~~~~~~~g~~~~~~l~G~fa~v~~d~~~~~l~~~rD~~G~~pLyy~~~~~~~~~faSe  160 (420)
                      .+|+++| ..+.|++.||+|+|+++|++||.+++++++|+|||++||.++++++++||++|+|||||+...++.++||||
T Consensus        81 ~eLr~~L~~~~~f~s~sDtEvil~l~~~~g~~~l~~l~G~fa~~i~d~~~~~l~~aRD~~G~~PLy~~~~~~~~~~faSe  160 (553)
T 1ct9_A           81 QALRAEYGDRYQFQTGSDCEVILALYQEKGPEFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASE  160 (553)
T ss_dssp             HHHHHHHTTTSCCCSCCTTHHHHHHHHHHTTTTGGGCCEEEEEEEEETTTTEEEEEECTTCCSCCEEEECTTCCEEEESS
T ss_pred             HHHHHHHhccCccCCCCcHHHHHHHHHHHHHHHHHhCCccEEEEEEECCCCEEEEEECCCCCCCeEEEEecCCEEEEeec
Confidence            9999999 337889999999999999999999999999999999999988999999999999999999843578999999


Q ss_pred             ccccccccccceeeCCCcEEEccCCeeEEeeCCCCCCC-CCCCCCCcHHHHHHHHHHHhhhhcccccceeEEecCCcchH
Q 014715          161 LKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSE-AIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDSS  239 (420)
Q Consensus       161 ~~~l~~~~~~i~~l~pG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~aV~~rl~~~~~v~~~LSGGlDSs  239 (420)
                      +++|...+++|++||||+++.+..++.++||++.|... ..++.++.+++++++|.+||++|+.++.|+|++||||+|||
T Consensus       161 ~~al~~~~~~i~~l~pG~~~~~~~g~~~~yw~~~~~~~~~~~~~~~~~~~lr~~L~~aV~~rl~sdvpvgv~LSGGlDSS  240 (553)
T 1ct9_A          161 MKALVPVCRTIKEFPAGSYLWSQDGEIRSYYHRDWFDYDAVKDNVTDKNELRQALEDSVKSHLMSDVPYGVLLSGGLDSS  240 (553)
T ss_dssp             GGGTTTTCSEEEECCTTEEEETTTCSEEECCCCGGGSHHHHTTCCCCHHHHHHHHHHHHHHHTCCSSCEEEECCSSHHHH
T ss_pred             hHHHHhhcCCEEEECCCeEEEEcCCcEEEeecCCccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCceEEeCCCCccHH
Confidence            99999989999999999999887777899999876542 23355678899999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccccc----cccCCcceeEEeecCCCCcHHHHHHHHHHhCCCceEEEechhhhHHHHHHHHHhhccCCc
Q 014715          240 LVASITARHLAGTKAA----RQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHVETYDV  315 (420)
Q Consensus       240 ~iaa~~~~~~~~~~~~----~~~~~~~~~~t~~~~~~~d~~~A~~vA~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (420)
                      +|++++++...+....    ..+.+++++||+++++++|..+|+++|+++|++|+++.++.+++.+.+++++++.+++++
T Consensus       241 ~iaala~~~~~~~~~~~~~~~a~~~~l~tfsig~~~~~E~~~A~~vA~~lg~~h~~i~~~~~~~~~~l~~~i~~~~~~~~  320 (553)
T 1ct9_A          241 IISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPGSPDLKAAQEVANHLGTVHHEIHFTVQEGLDAIRDVIYHIETYDV  320 (553)
T ss_dssp             HHHHHHHHHC----------------CEEEEEESTTCHHHHHHHHHHHHHTCEEEEEECCHHHHHHHHHHHHHHHCCCCH
T ss_pred             HHHHHHHHhhccccccccccccccCceeEEEecCCCCcHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHHHHHHhcCCCc
Confidence            9999999876421000    000023899999999889999999999999999999999999999999999998888765


Q ss_pred             ccccchhHHHHHHHHHHhcCCEEEEeccCCcccccccccccCCCChhHHhHHHHHHHHHhhhcccchhhHHHhhcCcccc
Q 014715          316 TTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEAR  395 (420)
Q Consensus       316 ~~~~~~~~~~~l~~~a~~~g~~v~ltG~GgDelf~Gy~~~~~~~~~~~~~~e~~~~~~~l~~~~l~r~dr~~~~~gie~r  395 (420)
                      +.++..+++|++++.+++.|++|+|||+||||+||||++|+..+....+.+++.+++.+++.++++|.||++|++|+|+|
T Consensus       321 ~~~~~~~~~~~l~~~a~~~g~~vvLsG~GaDElfgGY~~~~~~~~~~~~~~e~~~~l~~l~~~~l~r~Dr~~ma~glE~R  400 (553)
T 1ct9_A          321 TTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFGGYLYFHKAPNAKELHEETVRKLLALHMYDCARANKAMSAWGVEAR  400 (553)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCEEECCTTHHHHHTCSGGGGGCCSHHHHHHHHHHHHHHGGGTHHHHHHHHHHTTTCEEE
T ss_pred             ccchHHHHHHHHHHHHHHcCCeEEEECCCchhcccCcHhHhhCcchhhHHHHHHHHHHHHhhhcchhhhhHHhhcCceeE
Confidence            45555678899999999999999999999999999999999888888888898899999999999999999999999999


Q ss_pred             cCcCCHHHHHHHHcCCcccccc
Q 014715          396 VPFLDKDFINVAMAIDPEWKMV  417 (420)
Q Consensus       396 ~PfLd~~lv~~a~~lP~~~k~~  417 (420)
                      +||||++||+||++||+++|+.
T Consensus       401 ~PfLD~~lve~a~~lP~~~k~~  422 (553)
T 1ct9_A          401 VPFLDKKFLDVAMRINPQDKMC  422 (553)
T ss_dssp             CGGGCHHHHHHHHHSCGGGTCC
T ss_pred             CCcCCHHHHHHHhcCCHHHhcc
Confidence            9999999999999999999974
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A* Back     alignment and structure
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A* Back     alignment and structure
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1* Back     alignment and structure
>1xff_A D-fructose-6-, glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; complex (transferase/inhibitor), glutamine amidotransferase; HET: GLU; 1.80A {Escherichia coli} SCOP: d.153.1.1 PDB: 1xfg_A* Back     alignment and structure
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A* Back     alignment and structure
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A* Back     alignment and structure
>3mdn_A Glutamine aminotransferase class-II domain protei; structural genomics, PSI-2, protein structure initiative; 2.09A {Ruegeria pomeroyi} Back     alignment and structure
>1te5_A Conserved hypothetical protein; glutamine amidotransferase, amidotransferase, structural genomics, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa PAO1} SCOP: d.153.1.1 Back     alignment and structure
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A* Back     alignment and structure
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A* Back     alignment and structure
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii} Back     alignment and structure
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis} Back     alignment and structure
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A Back     alignment and structure
>1kqp_A NAD+ synthase, NH(3)-dependent NAD(+) synthetase, SPOR; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A Back     alignment and structure
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1 Back     alignment and structure
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii} Back     alignment and structure
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis} Back     alignment and structure
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp} Back     alignment and structure
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0 Back     alignment and structure
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A* Back     alignment and structure
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae} Back     alignment and structure
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A Back     alignment and structure
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens} Back     alignment and structure
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A* Back     alignment and structure
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1 Back     alignment and structure
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A* Back     alignment and structure
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A* Back     alignment and structure
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A* Back     alignment and structure
>3q4g_A NH(3)-dependent NAD(+) synthetase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 2.40A {Vibrio cholerae} SCOP: c.26.2.0 Back     alignment and structure
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus} Back     alignment and structure
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1 Back     alignment and structure
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii} Back     alignment and structure
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei} SCOP: c.26.2.0 Back     alignment and structure
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A* Back     alignment and structure
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2 Back     alignment and structure
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1 Back     alignment and structure
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens} Back     alignment and structure
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A* Back     alignment and structure
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1 Back     alignment and structure
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum} Back     alignment and structure
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis} Back     alignment and structure
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A Back     alignment and structure
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli} Back     alignment and structure
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2 Back     alignment and structure
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae} Back     alignment and structure
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1 Back     alignment and structure
>2goy_A Adenosine phosphosulfate reductase; iron sulfur cluster, nucleotide binding, thiosulfonate intermediate, oxidoreductase; HET: ADX; 2.70A {Pseudomonas aeruginosa} Back     alignment and structure
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3fwk_A FMN adenylyltransferase; FAD biosynthesis, alpha/beta protein, rossmann- like fold, APO-form, extended loop region; HET: BGC; 1.20A {Candida glabrata} PDB: 3g59_A* 3g5a_A* 3g6k_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 420
d1ct9a1324 c.26.2.1 (A:193-516) Asparagine synthetase B, C-te 2e-49
d1ct9a2192 d.153.1.1 (A:1-192) Asparagine synthetase B, N-ter 2e-42
d1q15a2204 d.153.1.1 (A:2-205) beta-Lactam synthetase {Pectob 9e-33
d1jgta1299 c.26.2.1 (A:210-508) beta-Lactam synthetase {Strep 2e-29
d1q15a1296 c.26.2.1 (A:206-501) beta-Lactam synthetase {Pecto 2e-29
d1jgta2206 d.153.1.1 (A:4-209) beta-Lactam synthetase {Strept 2e-27
d1xffa_238 d.153.1.1 (A:) Glucosamine 6-phosphate synthase, N 3e-19
d1gph12234 d.153.1.1 (1:1-234) Glutamine PRPP amidotransferas 2e-11
d1ecfa2249 d.153.1.1 (A:1-249) Glutamine PRPP amidotransferas 3e-08
>d1ct9a1 c.26.2.1 (A:193-516) Asparagine synthetase B, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 324 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: N-type ATP pyrophosphatases
domain: Asparagine synthetase B, C-terminal domain
species: Escherichia coli [TaxId: 562]

 Score =  168 bits (426), Expect = 2e-49
 Identities = 147/233 (63%), Positives = 185/233 (79%), Gaps = 8/233 (3%)

Query: 188 KRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDSSLVASITAR 247
           + W++     +A+     D   LRQA E++V   LM+DVP+GVLLSGGLDSS++++IT +
Sbjct: 1   RDWFDY----DAVKDNVTDKNELRQALEDSVKSHLMSDVPYGVLLSGGLDSSIISAITKK 56

Query: 248 HLA----GTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTVQDGIDAI 303
           + A      + +  W  QLHSF VGL GSPDLK A+EVA++LGTVHHE HFTVQ+G+DAI
Sbjct: 57  YAARRVEDQERSEAWWPQLHSFAVGLPGSPDLKAAQEVANHLGTVHHEIHFTVQEGLDAI 116

Query: 304 EEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEE 363
            +VIYH+ETYDVTTIRASTPM+LMSRKIK++G+KMV+SGEGSDE+FGGYLYFHKAPN +E
Sbjct: 117 RDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFGGYLYFHKAPNAKE 176

Query: 364 FHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKM 416
            H ET  K+ ALH YDC RANK+ SAWG+EARVPFLDK F++VAM I+P+ KM
Sbjct: 177 LHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRINPQDKM 229
>d1ct9a2 d.153.1.1 (A:1-192) Asparagine synthetase B, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 192 Back     information, alignment and structure
>d1q15a2 d.153.1.1 (A:2-205) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]} Length = 204 Back     information, alignment and structure
>d1jgta1 c.26.2.1 (A:210-508) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]} Length = 299 Back     information, alignment and structure
>d1q15a1 c.26.2.1 (A:206-501) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]} Length = 296 Back     information, alignment and structure
>d1jgta2 d.153.1.1 (A:4-209) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]} Length = 206 Back     information, alignment and structure
>d1xffa_ d.153.1.1 (A:) Glucosamine 6-phosphate synthase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 238 Back     information, alignment and structure
>d1gph12 d.153.1.1 (1:1-234) Glutamine PRPP amidotransferase, N-terminal domain {Bacillus subtilis [TaxId: 1423]} Length = 234 Back     information, alignment and structure
>d1ecfa2 d.153.1.1 (A:1-249) Glutamine PRPP amidotransferase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 249 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query420
d1ct9a2192 Asparagine synthetase B, N-terminal domain {Escher 100.0
d1ct9a1324 Asparagine synthetase B, C-terminal domain {Escher 100.0
d1jgta1299 beta-Lactam synthetase {Streptomyces clavuligerus 100.0
d1q15a1296 beta-Lactam synthetase {Pectobacterium carotovorum 100.0
d1jgta2206 beta-Lactam synthetase {Streptomyces clavuligerus 100.0
d1gph12234 Glutamine PRPP amidotransferase, N-terminal domain 100.0
d1xffa_238 Glucosamine 6-phosphate synthase, N-terminal domai 99.97
d1ecfa2249 Glutamine PRPP amidotransferase, N-terminal domain 99.97
d1q15a2204 beta-Lactam synthetase {Pectobacterium carotovorum 99.97
d1te5a_253 Hypothetical protein YafJ (PA1307) {Pseudomonas ae 99.49
d1ofda3430 Alpha subunit of glutamate synthase, N-terminal do 99.41
d1ea0a3422 Alpha subunit of glutamate synthase, N-terminal do 99.37
d1xnga1255 NH3-dependent NAD+-synthetase {Helicobacter pylori 98.62
d2c5sa1218 Thiamine biosynthesis protein ThiI, C-terminal dom 98.62
d1wy5a1216 TilS-like protein Aq_1887 {Aquifex aeolicus [TaxId 98.34
d1ni5a1227 tRNA-Ile-lysidine synthetase, TilS, N-terminal dom 98.11
d1gpma1197 GMP synthetase, central domain {Escherichia coli [ 98.1
d1kqpa_271 NH3-dependent NAD+-synthetase {Bacillus subtilis [ 98.09
d2pg3a1230 Queuosine biosynthesis protein QueC {Erwinia carot 98.06
d1k92a1188 Argininosuccinate synthetase, N-terminal domain {E 97.99
d1wxia1274 NH3-dependent NAD+-synthetase {Escherichia coli [T 97.98
d1j20a1165 Argininosuccinate synthetase, N-terminal domain {T 97.88
d1vl2a1168 Argininosuccinate synthetase, N-terminal domain {T 97.72
d1zuna1211 Sulfate adenylyltransferase subunit 2, CysD {Pseud 97.14
d1sura_215 Phosphoadenylyl sulphate (PAPS) reductase {Escheri 96.91
d1vbka1132 Hypothetical protein PH1313, C-terminal domain {Ar 96.11
d2d13a1226 Hypothetical protein PH1257 {Archaeon Pyrococcus h 95.59
>d1ct9a2 d.153.1.1 (A:1-192) Asparagine synthetase B, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ntn hydrolase-like
superfamily: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
family: Class II glutamine amidotransferases
domain: Asparagine synthetase B, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.6e-46  Score=327.93  Aligned_cols=191  Identities=44%  Similarity=0.870  Sum_probs=177.4

Q ss_pred             EEEEEEEcCCCCchHHHHHHHHHHHhcccCCCCCCceEEeCCeEEEEeeeeecCCCCCCCCeeecCCcEEEEEeeEEcCh
Q 014715            2 CGILAVLGCSDDSQAKRVRVLELSRRLKHRGPDWSGLYQHGDFYLAHQRLAIIDPASGDQPLYNEDKKIVVTVNGEIYNH   81 (420)
Q Consensus         2 cGI~G~~~~~~~~~~~~~~~~~~~~~l~~RGpd~~g~~~~~~~~l~h~rl~~~~~~~~~qP~~~~~~~~~~~~nG~i~n~   81 (420)
                      +||+|+++.+..+.+....+.+|++.|+|||||++|++..+++.+||+||++++...+.||....++.++++|||||||+
T Consensus         1 s~I~Gi~~~~~~~~~~~~~~~~m~~~l~hRGpD~~~~~~~~~~~lgh~Rlsi~~~~~~~~~~~~~~~~~~lv~NGeI~N~   80 (192)
T d1ct9a2           1 ASIFGVFDIKTDAVELRKKALELSRLMRHRGPDWSGIYASDNAILAHERLSIVDVNAGAQPLYNQQKTHVLAVNGEIYNH   80 (192)
T ss_dssp             CEEEEEESCCSCHHHHHHHHHHHHHTTGGGCBTEEEEEECSSEEEEEEECCCSCTTTCCSSEECTTSCEEEEEEEEETTH
T ss_pred             CeEEEEEeCCCChHHHHHHHHHHHHHhcccCCCCCCeEEeCCEEEEEEEEEEccccCCcccccccCCceEEEecCccchh
Confidence            69999999888776667788999999999999999999999999999999999987788888888889999999999999


Q ss_pred             HHHHHHh-cCCCccCCChHHHHHHHHHHHhHHHhhhccCceEEEEEECCCCEEEEEEcCCCCccEEEEEecCcEEEEeeC
Q 014715           82 EALRERL-TNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSE  160 (420)
Q Consensus        82 ~~L~~~l-~~~~~~~~~d~e~l~~~~~~~g~~~~~~l~G~fa~v~~d~~~~~l~~~rD~~G~~pLyy~~~~~~~~~faSe  160 (420)
                      .+|+++| ....+.+.+|+|+++++|++||.++++.++|+|||++||..+++++++||++|+|||||+...++.++||||
T Consensus        81 ~~l~~~l~~~~~~~s~sDtevll~~~~~~g~~~~~~l~G~fa~~i~d~~~~~l~~aRD~~G~kPLyy~~~~~g~~~fsSE  160 (192)
T d1ct9a2          81 QALRAEYGDRYQFQTGSDCEVILALYQEKGPEFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASE  160 (192)
T ss_dssp             HHHHHHHTTTSCCCSCCTTHHHHHHHHHHTTTTGGGCCEEEEEEEEETTTTEEEEEECTTCCSCCEEEECTTCCEEEESS
T ss_pred             HHHHHHHhcCcccCCCCcHHHHHHHhhhcchhhhhhhhhheEEEEEecCcceeEEEEccccceeEEEEEecCcEEEEEeC
Confidence            9999999 556778899999999999999999999999999999999999999999999999999998865668999999


Q ss_pred             ccccccccccceeeCCCcEEEccCCeeEEeeC
Q 014715          161 LKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYN  192 (420)
Q Consensus       161 ~~~l~~~~~~i~~l~pG~~~~~~~~~~~~~~~  192 (420)
                      +++|...+++|+++||||++.++.+++++||.
T Consensus       161 ~k~L~~~~~~i~~~~pG~~l~~~~~~i~~y~~  192 (192)
T d1ct9a2         161 MKALVPVCRTIKEFPAGSYLWSQDGEIRSYYH  192 (192)
T ss_dssp             GGGTTTTCSEEEECCTTEEEETTTCSEEECCC
T ss_pred             HHHHHHhhCCeEEcCCccEEEEcCCcEEeecC
Confidence            99999999999999999999998888999883
>d1ct9a1 c.26.2.1 (A:193-516) Asparagine synthetase B, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jgta1 c.26.2.1 (A:210-508) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1q15a1 c.26.2.1 (A:206-501) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]} Back     information, alignment and structure
>d1jgta2 d.153.1.1 (A:4-209) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1gph12 d.153.1.1 (1:1-234) Glutamine PRPP amidotransferase, N-terminal domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1xffa_ d.153.1.1 (A:) Glucosamine 6-phosphate synthase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ecfa2 d.153.1.1 (A:1-249) Glutamine PRPP amidotransferase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1q15a2 d.153.1.1 (A:2-205) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]} Back     information, alignment and structure
>d1te5a_ d.153.1.1 (A:) Hypothetical protein YafJ (PA1307) {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1ofda3 d.153.1.1 (A:1-430) Alpha subunit of glutamate synthase, N-terminal domain {Synechocystis sp. [TaxId: 1143]} Back     information, alignment and structure
>d1ea0a3 d.153.1.1 (A:1-422) Alpha subunit of glutamate synthase, N-terminal domain {Azospirillum brasilense [TaxId: 192]} Back     information, alignment and structure
>d1xnga1 c.26.2.1 (A:3-257) NH3-dependent NAD+-synthetase {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d2c5sa1 c.26.2.6 (A:174-391) Thiamine biosynthesis protein ThiI, C-terminal domain {Bacillus anthracis [TaxId: 1392]} Back     information, alignment and structure
>d1wy5a1 c.26.2.5 (A:1-216) TilS-like protein Aq_1887 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1ni5a1 c.26.2.5 (A:0-226) tRNA-Ile-lysidine synthetase, TilS, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gpma1 c.26.2.1 (A:208-404) GMP synthetase, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kqpa_ c.26.2.1 (A:) NH3-dependent NAD+-synthetase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2pg3a1 c.26.2.1 (A:1-230) Queuosine biosynthesis protein QueC {Erwinia carotovora [TaxId: 554]} Back     information, alignment and structure
>d1k92a1 c.26.2.1 (A:1-188) Argininosuccinate synthetase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wxia1 c.26.2.1 (A:2-275) NH3-dependent NAD+-synthetase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1j20a1 c.26.2.1 (A:1-165) Argininosuccinate synthetase, N-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1vl2a1 c.26.2.1 (A:2-169) Argininosuccinate synthetase, N-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1zuna1 c.26.2.2 (A:1-211) Sulfate adenylyltransferase subunit 2, CysD {Pseudomonas syringae pv. tomato [TaxId: 323]} Back     information, alignment and structure
>d1sura_ c.26.2.2 (A:) Phosphoadenylyl sulphate (PAPS) reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vbka1 c.26.2.6 (A:176-307) Hypothetical protein PH1313, C-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2d13a1 c.26.2.1 (A:2-227) Hypothetical protein PH1257 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure