Citrus Sinensis ID: 014832

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------
MEMFFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVCSSMTFKYCP
ccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccc
cHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccHHccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcHHccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccEEEEEEEEHcccccEEEEccc
MEMFFYLVFGALGAVVAALELSktnkdrintssafnsFKNNYLLVYSLMMAGDWLQGPYVYYLYStygfgkgeiGQLFiagfgssmlFGTIVGSladkqgrkRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLlvdsfslgpvapfdaAACFLAIGMVIILSswtenygdpseskdLLTQFRGAAVAIASDEKIALLGAIQSLfegsmytfvflwtpalspndeeiphgfIFATFMLASMLGSSLASRlmarspprveSYMQIVFVVSSVSLLLPIVTSFlvapsnvksggisfsgslqllgfctfeacvgifwpSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVcssmtfkycp
MEMFFYLVFGALGAVVAALELSKTnkdrintssafnsfKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVCSSMTFKYCP
MEMFFYLVFgalgavvaalELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFmlasmlgsslasrlmarsPPRVESYMQIVFvvssvslllPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVCSSMTFKYCP
**MFFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP**SKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMA***PRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVCSSMTFKYC*
MEMFFYLVFGALGAVVAALELS************FNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSW********************AVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVCSSMTFKYCP
MEMFFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVCSSMTFKYCP
MEMFFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVCSSMTFKYCP
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SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEMFFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVCSSMTFKYCP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query417 2.2.26 [Sep-21-2011]
Q6N075450 Major facilitator superfa yes no 0.906 0.84 0.382 1e-61
Q921Y4450 Major facilitator superfa yes no 0.889 0.824 0.381 7e-61
Q0VC03450 Major facilitator superfa yes no 0.889 0.824 0.381 1e-59
Q5R542450 Major facilitator superfa yes no 0.889 0.824 0.379 7e-59
Q1KKV8480 Major facilitator superfa N/A no 0.906 0.787 0.346 2e-56
Q6DG19481 Major facilitator superfa yes no 0.904 0.783 0.331 5e-53
Q08B29451 Major facilitator superfa N/A no 0.832 0.769 0.344 8e-53
Q28E13452 Major facilitator superfa yes no 0.899 0.829 0.333 1e-48
>sp|Q6N075|MFSD5_HUMAN Major facilitator superfamily domain-containing protein 5 OS=Homo sapiens GN=MFSD5 PE=2 SV=2 Back     alignment and function desciption
 Score =  237 bits (604), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 155/405 (38%), Positives = 233/405 (57%), Gaps = 27/405 (6%)

Query: 6   YLVFGALGAVVAALELSKTNKD---RINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYY 62
           YL F  L A    LELS+       R  ++ +F  F+ ++  VY L +A DWLQ PY+Y 
Sbjct: 6   YLAFVGLLASCLGLELSRCRAKPPGRACSNPSFLRFQLDFYQVYFLALAADWLQAPYLYK 65

Query: 63  LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSP 122
           LY  Y F +G+I  L++ G  S++LFG +  SL D  GRK +CV + LTY L C+TK S 
Sbjct: 66  LYQHYYFLEGQIAILYVCGLASTVLFGLVASSLVDWLGRKNSCVLFSLTYSLCCLTKLSQ 125

Query: 123 QYKILMIGRILGGIATSLLFSAFESWLVAEHNKR-GFEQQWLSITFSKAIFLGNGLVAIL 181
            Y +L++GR LGG++T+LLFSAFE+W + EH +R  F  +W+  TF++A F  N ++A++
Sbjct: 126 DYFVLLVGRALGGLSTALLFSAFEAWYIHEHVERHDFPAEWIPATFARAAF-WNHVLAVV 184

Query: 182 SGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAV 241
           +G+    +     LGPVAPF AA   LA+   + L +W ENY      +       G   
Sbjct: 185 AGVAAEAVASWIGLGPVAPFVAAIPLLALAGALALRNWGENY---DRQRAFSRTCAGGLR 241

Query: 242 AIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSL- 300
            + SD ++ LLG IQ+LFE  ++ FVFLWTP L P+    P G IF++FM AS+LGSSL 
Sbjct: 242 CLLSDRRVLLLGTIQALFESVIFIFVFLWTPVLDPHGA--PLGIIFSSFMAASLLGSSLY 299

Query: 301 ---ASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLG 357
               S+     P  + S + ++ VV S+ +L     +F  +P   +S   SF      + 
Sbjct: 300 RIATSKRYHLQPMHLLS-LAVLIVVFSLFML-----TFSTSPGQ-ESPVESF------IA 346

Query: 358 FCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCV 402
           F   E   G+++PS+  +R + IPE  ++ ++N+FR+PL+   C+
Sbjct: 347 FLLIELACGLYFPSMSFLRRKVIPETEQAGVLNWFRVPLHSLACL 391

Homo sapiens (taxid: 9606)
>sp|Q921Y4|MFSD5_MOUSE Major facilitator superfamily domain-containing protein 5 OS=Mus musculus GN=Mfsd5 PE=2 SV=1 Back     alignment and function description
>sp|Q0VC03|MFSD5_BOVIN Major facilitator superfamily domain-containing protein 5 OS=Bos taurus GN=MFSD5 PE=2 SV=1 Back     alignment and function description
>sp|Q5R542|MFSD5_PONAB Major facilitator superfamily domain-containing protein 5 OS=Pongo abelii GN=MFSD5 PE=2 SV=1 Back     alignment and function description
>sp|Q1KKV8|MFSD5_TAKRU Major facilitator superfamily domain-containing protein 5 OS=Takifugu rubripes GN=mfsd5 PE=3 SV=1 Back     alignment and function description
>sp|Q6DG19|MFSD5_DANRE Major facilitator superfamily domain-containing protein 5 OS=Danio rerio GN=mfsd5 PE=2 SV=1 Back     alignment and function description
>sp|Q08B29|MFSD5_XENLA Major facilitator superfamily domain-containing protein 5 OS=Xenopus laevis GN=mfsd5 PE=2 SV=1 Back     alignment and function description
>sp|Q28E13|MFSD5_XENTR Major facilitator superfamily domain-containing protein 5 OS=Xenopus tropicalis GN=mfsd5 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query417
255549256460 conserved hypothetical protein [Ricinus 0.976 0.884 0.923 0.0
449456403459 PREDICTED: major facilitator superfamily 0.976 0.886 0.906 0.0
224132678459 predicted protein [Populus trichocarpa] 0.976 0.886 0.904 0.0
18417054460 major facilitator protein [Arabidopsis t 0.976 0.884 0.899 0.0
385137884460 major facilitator protein, partial [Arab 0.976 0.884 0.899 0.0
297803322460 hypothetical protein ARALYDRAFT_913755 [ 0.976 0.884 0.899 0.0
224120908459 predicted protein [Populus trichocarpa] 0.976 0.886 0.909 0.0
225455290460 PREDICTED: major facilitator superfamily 0.976 0.884 0.894 0.0
225426625459 PREDICTED: major facilitator superfamily 0.976 0.886 0.904 0.0
356509214459 PREDICTED: major facilitator superfamily 0.976 0.886 0.901 0.0
>gi|255549256|ref|XP_002515682.1| conserved hypothetical protein [Ricinus communis] gi|223545225|gb|EEF46734.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  778 bits (2010), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/407 (92%), Positives = 395/407 (97%)

Query: 1   MEMFFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYV 60
           ME+FFY+VFG LGAVVAALELSKTNKDRINTS AFNSFKNNYLLVYSLMMAGDWLQGPYV
Sbjct: 1   MEVFFYMVFGGLGAVVAALELSKTNKDRINTSPAFNSFKNNYLLVYSLMMAGDWLQGPYV 60

Query: 61  YYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKH 120
           Y+LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRAC+TYC+TYILSCITKH
Sbjct: 61  YFLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACITYCITYILSCITKH 120

Query: 121 SPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAI 180
           SPQYK+LMIGR+LGGIATSLLFSAFESWLVAEHNKRGF+QQWLS+TFSKAIFLGNGL+AI
Sbjct: 121 SPQYKVLMIGRVLGGIATSLLFSAFESWLVAEHNKRGFDQQWLSLTFSKAIFLGNGLIAI 180

Query: 181 LSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAA 240
           LSGLFGNLLVD+F+LGPVAPFDAAACFLAIGM II SSWTEN+GD SESKDLLTQFRGAA
Sbjct: 181 LSGLFGNLLVDTFALGPVAPFDAAACFLAIGMAIIFSSWTENFGDHSESKDLLTQFRGAA 240

Query: 241 VAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSL 300
           +AIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSL
Sbjct: 241 MAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSL 300

Query: 301 ASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCT 360
           ASRLMA S PRVESYMQIVFVVSS+SL+LPI T+FLVAPS  + GGISFSG LQLLGFCT
Sbjct: 301 ASRLMAHSSPRVESYMQIVFVVSSISLMLPIATNFLVAPSKARGGGISFSGCLQLLGFCT 360

Query: 361 FEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407
           FEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVC+VLYNV
Sbjct: 361 FEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCIVLYNV 407

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449456403|ref|XP_004145939.1| PREDICTED: major facilitator superfamily domain-containing protein 5-like [Cucumis sativus] gi|449497371|ref|XP_004160383.1| PREDICTED: major facilitator superfamily domain-containing protein 5-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224132678|ref|XP_002321382.1| predicted protein [Populus trichocarpa] gi|222868378|gb|EEF05509.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|18417054|ref|NP_567786.1| major facilitator protein [Arabidopsis thaliana] gi|13272473|gb|AAK17175.1|AF325107_1 putative protein [Arabidopsis thaliana] gi|16930439|gb|AAL31905.1|AF419573_1 AT4g27720/T29A15_210 [Arabidopsis thaliana] gi|15912261|gb|AAL08264.1| AT4g27720/T29A15_210 [Arabidopsis thaliana] gi|21536852|gb|AAM61184.1| putative transporter [Arabidopsis thaliana] gi|27764934|gb|AAO23588.1| At4g27720/T29A15_210 [Arabidopsis thaliana] gi|332659985|gb|AEE85385.1| major facilitator protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|385137884|gb|AFI41203.1| major facilitator protein, partial [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297803322|ref|XP_002869545.1| hypothetical protein ARALYDRAFT_913755 [Arabidopsis lyrata subsp. lyrata] gi|297315381|gb|EFH45804.1| hypothetical protein ARALYDRAFT_913755 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224120908|ref|XP_002318449.1| predicted protein [Populus trichocarpa] gi|118483361|gb|ABK93582.1| unknown [Populus trichocarpa] gi|222859122|gb|EEE96669.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225455290|ref|XP_002274807.1| PREDICTED: major facilitator superfamily domain-containing protein 5 [Vitis vinifera] gi|302143948|emb|CBI23053.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225426625|ref|XP_002280860.1| PREDICTED: major facilitator superfamily domain-containing protein 5 [Vitis vinifera] gi|297742424|emb|CBI34573.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356509214|ref|XP_003523346.1| PREDICTED: major facilitator superfamily domain-containing protein 5-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query417
TAIR|locus:2137707460 AT4G27720 [Arabidopsis thalian 0.976 0.884 0.828 6.6e-184
TAIR|locus:2019429462 AT1G64650 [Arabidopsis thalian 0.976 0.880 0.820 2.6e-182
TAIR|locus:2082971460 AT3G49310 [Arabidopsis thalian 0.976 0.884 0.798 7.3e-178
WB|WBGene00021870432 Y54G2A.4 [Caenorhabditis elega 0.709 0.685 0.495 2.6e-70
UNIPROTKB|Q6N075450 MFSD5 "Major facilitator super 0.920 0.853 0.344 1e-59
MGI|MGI:2145901450 Mfsd5 "major facilitator super 0.920 0.853 0.342 1e-59
UNIPROTKB|Q0VC03450 MFSD5 "Major facilitator super 0.920 0.853 0.342 2.7e-59
ZFIN|ZDB-GENE-040718-468481 mfsd5 "major facilitator super 0.472 0.409 0.4 4.2e-53
TAIR|locus:1005716655449 AT2G23093 "AT2G23093" [Arabido 0.606 0.563 0.245 1.2e-20
CGD|CAL0001498496 HGT18 [Candida albicans (taxid 0.393 0.330 0.313 4.4e-06
TAIR|locus:2137707 AT4G27720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1784 (633.1 bits), Expect = 6.6e-184, P = 6.6e-184
 Identities = 337/407 (82%), Positives = 357/407 (87%)

Query:     1 MEMFFYLVFXXXXXXXXXXELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYV 60
             ME+F+YLVF          ELSK NKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYV
Sbjct:     1 MEIFYYLVFGVLGLVVAALELSKNNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYV 60

Query:    61 YYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKH 120
             YYLYSTYGFGKG+IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYC+TYILSCITKH
Sbjct:    61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITKH 120

Query:   121 SPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAI 180
             SPQYK+LM+GR+LGGIATSLLFS+FESWLVAEHNKRGFEQQWLS+TFSKA+F GNGLVAI
Sbjct:   121 SPQYKVLMVGRVLGGIATSLLFSSFESWLVAEHNKRGFEQQWLSVTFSKAVFFGNGLVAI 180

Query:   181 LSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAA 240
             ++GLFGNLLVD+FSLGPVAPFDAAACFL IGM +ILSSWTENYGDPSE+KDLLTQFRGAA
Sbjct:   181 IAGLFGNLLVDTFSLGPVAPFDAAACFLTIGMAVILSSWTENYGDPSENKDLLTQFRGAA 240

Query:   241 VAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFXXXXXXXXXX 300
             VAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATF          
Sbjct:   241 VAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSL 300

Query:   301 XXXXXXXXPPRVESYMQIVFXXXXXXXXXPIVTSFLVAPSNVKSGGISFSGSLQLLGFCT 360
                      P+VESYMQIVF         PI+ +  +APS VK GGISFSG  QLLGFC 
Sbjct:   301 ASRLLSRSTPKVESYMQIVFLVSGAALLLPILMTLFIAPSKVKGGGISFSGCFQLLGFCI 360

Query:   361 FEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407
             FEACVG+FWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV
Sbjct:   361 FEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407
GO:0005886 "plasma membrane" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0005768 "endosome" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
TAIR|locus:2019429 AT1G64650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082971 AT3G49310 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00021870 Y54G2A.4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q6N075 MFSD5 "Major facilitator superfamily domain-containing protein 5" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2145901 Mfsd5 "major facilitator superfamily domain containing 5" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q0VC03 MFSD5 "Major facilitator superfamily domain-containing protein 5" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040718-468 mfsd5 "major facilitator superfamily domain containing 5" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
TAIR|locus:1005716655 AT2G23093 "AT2G23093" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
CGD|CAL0001498 HGT18 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q921Y4MFSD5_MOUSENo assigned EC number0.38190.88960.8244yesno
Q0VC03MFSD5_BOVINNo assigned EC number0.38190.88960.8244yesno
Q28E13MFSD5_XENTRNo assigned EC number0.33330.89920.8296yesno
Q5R542MFSD5_PONABNo assigned EC number0.37930.88960.8244yesno
Q6N075MFSD5_HUMANNo assigned EC number0.38270.90640.84yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query417
pfam05631354 pfam05631, DUF791, Protein of unknown function (DU 0.0
pfam07690346 pfam07690, MFS_1, Major Facilitator Superfamily 2e-07
COG2814394 COG2814, AraJ, Arabinose efflux permease [Carbohyd 0.004
>gnl|CDD|114359 pfam05631, DUF791, Protein of unknown function (DUF791) Back     alignment and domain information 
 Score =  596 bits (1539), Expect = 0.0
 Identities = 281/355 (79%), Positives = 306/355 (86%), Gaps = 1/355 (0%)

Query: 4   FFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYL 63
           F+YLVFG L AVVA LEL K +KDR NT   FNSFKNNYLLVYS+MMAGDWLQGPYVYYL
Sbjct: 1   FYYLVFGGLAAVVALLELYKRSKDRSNTDPKFNSFKNNYLLVYSMMMAGDWLQGPYVYYL 60

Query: 64  YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQ 123
           YS+YGF KG+IG LFIAGFGSSMLFGTIVGSLADKQGRKRAC+TYC+ YILSCITKHSP 
Sbjct: 61  YSSYGFSKGDIGILFIAGFGSSMLFGTIVGSLADKQGRKRACLTYCILYILSCITKHSPN 120

Query: 124 YKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSG 183
           YK+LMIGR LGGIATSLLFSAFESWL+AEHNKRGF  QWLS TFSKA FLGNGLVAI+SG
Sbjct: 121 YKVLMIGRFLGGIATSLLFSAFESWLIAEHNKRGFSDQWLSTTFSKAAFLGNGLVAIISG 180

Query: 184 LFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAI 243
           LF NLL D F  GPVAPFDAAACFLAIGM IIL++W+ENYGDPS+ KDL  QF+ AA AI
Sbjct: 181 LFANLLADRFGFGPVAPFDAAACFLAIGMAIILNTWSENYGDPSDKKDLKEQFKVAAQAI 240

Query: 244 ASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASR 303
           ASD  +  LG +QSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSS+A+R
Sbjct: 241 ASDPNVFCLGLVQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSVAAR 300

Query: 304 LMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGF 358
           L+ R   RVESYMQIVF++S+V L LPIVTS LV PS VK  G+S    +QLLGF
Sbjct: 301 LLQRH-LRVESYMQIVFLLSAVCLSLPIVTSVLVTPSKVKDDGLSLVFGIQLLGF 354

This family consists of several eukaryotic proteins of unknown function. Length = 354
>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily Back     alignment and domain information
>gnl|CDD|225371 COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 417
PF05631354 DUF791: Protein of unknown function (DUF791); Inte 100.0
KOG4332454 consensus Predicted sugar transporter [Carbohydrat 100.0
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 100.0
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 100.0
PRK10406432 alpha-ketoglutarate transporter; Provisional 100.0
TIGR00900365 2A0121 H+ Antiporter protein. 100.0
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 99.98
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 99.98
PRK14995495 methyl viologen resistance protein SmvA; Provision 99.98
PRK03545390 putative arabinose transporter; Provisional 99.98
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 99.98
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 99.97
PRK09952438 shikimate transporter; Provisional 99.97
TIGR00891405 2A0112 putative sialic acid transporter. 99.97
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 99.97
PRK10213394 nepI ribonucleoside transporter; Reviewed 99.97
PRK10642490 proline/glycine betaine transporter; Provisional 99.97
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 99.97
PRK15075434 citrate-proton symporter; Provisional 99.97
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 99.97
PRK11663434 regulatory protein UhpC; Provisional 99.97
PRK15402406 multidrug efflux system translocase MdfA; Provisio 99.97
PRK12307426 putative sialic acid transporter; Provisional 99.97
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 99.97
PLN00028476 nitrate transmembrane transporter; Provisional 99.97
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 99.97
PRK09874408 drug efflux system protein MdtG; Provisional 99.97
PRK12382392 putative transporter; Provisional 99.97
PRK09705393 cynX putative cyanate transporter; Provisional 99.97
PRK10489417 enterobactin exporter EntS; Provisional 99.97
PRK05122399 major facilitator superfamily transporter; Provisi 99.97
TIGR00895398 2A0115 benzoate transport. 99.96
TIGR00893399 2A0114 d-galactonate transporter. 99.96
PRK10091382 MFS transport protein AraJ; Provisional 99.96
PRK11646400 multidrug resistance protein MdtH; Provisional 99.96
PRK10133438 L-fucose transporter; Provisional 99.96
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 99.96
PRK03699394 putative transporter; Provisional 99.96
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 99.96
PRK10504471 putative transporter; Provisional 99.96
PRK11195393 lysophospholipid transporter LplT; Provisional 99.96
PRK10077479 xylE D-xylose transporter XylE; Provisional 99.96
TIGR00897402 2A0118 polyol permease family. This family of prot 99.96
PRK15011393 sugar efflux transporter B; Provisional 99.96
PRK15403413 multidrug efflux system protein MdtM; Provisional 99.96
TIGR00892455 2A0113 monocarboxylate transporter 1. 99.96
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 99.96
PRK11043401 putative transporter; Provisional 99.96
PRK10054395 putative transporter; Provisional 99.96
TIGR00902382 2A0127 phenyl proprionate permease family protein. 99.96
PRK03893496 putative sialic acid transporter; Provisional 99.96
PRK11652394 emrD multidrug resistance protein D; Provisional 99.96
TIGR00886366 2A0108 nitrite extrusion protein (nitrite facilita 99.96
TIGR00881379 2A0104 phosphoglycerate transporter family protein 99.96
PRK03633381 putative MFS family transporter protein; Provision 99.95
PRK10473392 multidrug efflux system protein MdtL; Provisional 99.95
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 99.95
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 99.95
TIGR00896355 CynX cyanate transporter. This family of proteins 99.95
TIGR00898505 2A0119 cation transport protein. 99.95
TIGR00901356 2A0125 AmpG-related permease. 99.95
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 99.95
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 99.95
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 99.95
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 99.95
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 99.95
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 99.94
KOG1330493 consensus Sugar transporter/spinster transmembrane 99.94
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 99.94
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 99.94
PRK09528420 lacY galactoside permease; Reviewed 99.94
PF05977 524 MFS_3: Transmembrane secretion effector; InterPro: 99.94
COG2223417 NarK Nitrate/nitrite transporter [Inorganic ion tr 99.93
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.93
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 99.93
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 99.92
PRK11010 491 ampG muropeptide transporter; Validated 99.92
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.92
PRK10207489 dipeptide/tripeptide permease B; Provisional 99.92
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 99.91
KOG0569485 consensus Permease of the major facilitator superf 99.91
KOG2532466 consensus Permease of the major facilitator superf 99.91
PRK11902402 ampG muropeptide transporter; Reviewed 99.91
COG0738422 FucP Fucose permease [Carbohydrate transport and m 99.9
TIGR00806511 rfc RFC reduced folate carrier. Proteins of the RF 99.9
KOG2533495 consensus Permease of the major facilitator superf 99.89
KOG3764464 consensus Vesicular amine transporter [Intracellul 99.88
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 99.88
KOG0254513 consensus Predicted transporter (major facilitator 99.88
KOG2504509 consensus Monocarboxylate transporter [Carbohydrat 99.88
PRK09584500 tppB putative tripeptide transporter permease; Rev 99.88
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 99.88
PF06609 599 TRI12: Fungal trichothecene efflux pump (TRI12); I 99.87
TIGR00805 633 oat sodium-independent organic anion transporter. 99.87
KOG0253528 consensus Synaptic vesicle transporter SV2 (major 99.87
COG2807395 CynX Cyanate permease [Inorganic ion transport and 99.86
PRK09669444 putative symporter YagG; Provisional 99.86
KOG0252538 consensus Inorganic phosphate transporter [Inorgan 99.84
PF13347428 MFS_2: MFS/sugar transport protein 99.84
TIGR01301477 GPH_sucrose GPH family sucrose/H+ symporter. This 99.83
KOG0255521 consensus Synaptic vesicle transporter SVOP and re 99.83
PRK10429473 melibiose:sodium symporter; Provisional 99.83
PRK09848448 glucuronide transporter; Provisional 99.82
PRK15462493 dipeptide/tripeptide permease D; Provisional 99.82
PTZ00207 591 hypothetical protein; Provisional 99.82
KOG2615451 consensus Permease of the major facilitator superf 99.81
TIGR00788468 fbt folate/biopterin transporter. The only functio 99.8
PF00083451 Sugar_tr: Sugar (and other) transporter; InterPro: 99.78
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 99.78
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 99.76
PRK11462460 putative transporter; Provisional 99.75
COG2211467 MelB Na+/melibiose symporter and related transport 99.74
KOG2563480 consensus Permease of the major facilitator superf 99.69
COG3104498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 99.67
TIGR01272310 gluP glucose/galactose transporter. Disruption of 99.67
COG2270438 Permeases of the major facilitator superfamily [Ge 99.64
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.59
KOG4686459 consensus Predicted sugar transporter [Carbohydrat 99.58
KOG2325488 consensus Predicted transporter/transmembrane prot 99.52
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 99.51
PRK15011393 sugar efflux transporter B; Provisional 99.48
PRK09528420 lacY galactoside permease; Reviewed 99.45
PRK05122399 major facilitator superfamily transporter; Provisi 99.43
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 99.43
TIGR00902382 2A0127 phenyl proprionate permease family protein. 99.43
KOG2816463 consensus Predicted transporter ADD1 (major facili 99.41
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 99.4
PRK10489417 enterobactin exporter EntS; Provisional 99.39
PRK03633381 putative MFS family transporter protein; Provision 99.38
PRK09874408 drug efflux system protein MdtG; Provisional 99.38
PRK03699394 putative transporter; Provisional 99.36
PRK10642490 proline/glycine betaine transporter; Provisional 99.36
TIGR00880141 2_A_01_02 Multidrug resistance protein. 99.36
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 99.36
PF01770412 Folate_carrier: Reduced folate carrier; InterPro: 99.36
PRK03545390 putative arabinose transporter; Provisional 99.35
PRK09705393 cynX putative cyanate transporter; Provisional 99.34
PRK12382392 putative transporter; Provisional 99.34
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 99.33
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 99.28
PRK09952438 shikimate transporter; Provisional 99.27
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 99.26
PRK11010491 ampG muropeptide transporter; Validated 99.26
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 99.26
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 99.24
TIGR00897402 2A0118 polyol permease family. This family of prot 99.23
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 99.23
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 99.2
TIGR00892455 2A0113 monocarboxylate transporter 1. 99.19
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 99.19
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 99.18
PF05977524 MFS_3: Transmembrane secretion effector; InterPro: 99.17
PRK10091382 MFS transport protein AraJ; Provisional 99.16
PRK10504471 putative transporter; Provisional 99.14
PF03137539 OATP: Organic Anion Transporter Polypeptide (OATP) 99.13
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 99.13
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 99.12
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 99.11
KOG3626 735 consensus Organic anion transporter [Secondary met 99.11
TIGR00900365 2A0121 H+ Antiporter protein. 99.11
PRK11902402 ampG muropeptide transporter; Reviewed 99.1
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 99.09
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 99.09
PRK15402406 multidrug efflux system translocase MdfA; Provisio 99.09
PRK10054395 putative transporter; Provisional 99.08
PF06963432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 99.08
PRK15075434 citrate-proton symporter; Provisional 99.08
PRK10077479 xylE D-xylose transporter XylE; Provisional 99.08
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 99.07
PRK11663434 regulatory protein UhpC; Provisional 99.07
PRK10213394 nepI ribonucleoside transporter; Reviewed 99.07
PRK10406432 alpha-ketoglutarate transporter; Provisional 99.06
PRK10473392 multidrug efflux system protein MdtL; Provisional 99.05
PRK03893496 putative sialic acid transporter; Provisional 99.05
TIGR00896355 CynX cyanate transporter. This family of proteins 99.05
TIGR00893399 2A0114 d-galactonate transporter. 99.05
TIGR00891405 2A0112 putative sialic acid transporter. 99.03
COG2223417 NarK Nitrate/nitrite transporter [Inorganic ion tr 99.02
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 99.02
PLN00028476 nitrate transmembrane transporter; Provisional 99.0
PRK09848448 glucuronide transporter; Provisional 98.98
TIGR01272310 gluP glucose/galactose transporter. Disruption of 98.97
PRK12307426 putative sialic acid transporter; Provisional 98.96
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 98.95
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 98.94
TIGR00924 475 yjdL_sub1_fam amino acid/peptide transporter (Pept 98.93
KOG3098461 consensus Uncharacterized conserved protein [Funct 98.93
PRK11646400 multidrug resistance protein MdtH; Provisional 98.93
PRK09669444 putative symporter YagG; Provisional 98.92
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 98.91
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 98.9
PRK11195393 lysophospholipid transporter LplT; Provisional 98.89
COG2807395 CynX Cyanate permease [Inorganic ion transport and 98.89
TIGR00898505 2A0119 cation transport protein. 98.88
PRK10133438 L-fucose transporter; Provisional 98.88
PRK14995495 methyl viologen resistance protein SmvA; Provision 98.88
TIGR00901356 2A0125 AmpG-related permease. 98.87
KOG2504509 consensus Monocarboxylate transporter [Carbohydrat 98.86
PRK11043401 putative transporter; Provisional 98.85
PRK15462 493 dipeptide/tripeptide permease D; Provisional 98.84
PRK10429473 melibiose:sodium symporter; Provisional 98.82
PF13347428 MFS_2: MFS/sugar transport protein 98.82
TIGR00895398 2A0115 benzoate transport. 98.81
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 98.78
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 98.77
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 98.76
KOG0637498 consensus Sucrose transporter and related proteins 98.76
PRK10207 489 dipeptide/tripeptide permease B; Provisional 98.75
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 98.75
TIGR02332 412 HpaX 4-hydroxyphenylacetate permease. This protein 98.73
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 98.73
PRK11462460 putative transporter; Provisional 98.71
KOG0569485 consensus Permease of the major facilitator superf 98.67
TIGR00881379 2A0104 phosphoglycerate transporter family protein 98.67
PRK11652394 emrD multidrug resistance protein D; Provisional 98.67
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 98.66
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 98.65
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 98.65
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 98.63
COG2270438 Permeases of the major facilitator superfamily [Ge 98.62
PRK09584 500 tppB putative tripeptide transporter permease; Rev 98.6
COG2211467 MelB Na+/melibiose symporter and related transport 98.6
KOG3764464 consensus Vesicular amine transporter [Intracellul 98.58
COG0477338 ProP Permeases of the major facilitator superfamil 98.57
TIGR00880141 2_A_01_02 Multidrug resistance protein. 98.57
TIGR00769472 AAA ADP/ATP carrier protein family. These proteins 98.57
TIGR00886 366 2A0108 nitrite extrusion protein (nitrite facilita 98.57
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 98.55
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 98.51
PF0677985 DUF1228: Protein of unknown function (DUF1228); In 98.51
PRK15403413 multidrug efflux system protein MdtM; Provisional 98.47
KOG4686459 consensus Predicted sugar transporter [Carbohydrat 98.46
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 98.43
TIGR00788468 fbt folate/biopterin transporter. The only functio 98.43
KOG2615 451 consensus Permease of the major facilitator superf 98.41
PF1283277 MFS_1_like: MFS_1 like family 98.38
KOG3762618 consensus Predicted transporter [General function 98.35
KOG1330 493 consensus Sugar transporter/spinster transmembrane 98.34
TIGR00806 511 rfc RFC reduced folate carrier. Proteins of the RF 98.33
COG0738422 FucP Fucose permease [Carbohydrate transport and m 98.23
KOG0253528 consensus Synaptic vesicle transporter SV2 (major 98.16
KOG3810433 consensus Micronutrient transporters (folate trans 98.09
KOG2532466 consensus Permease of the major facilitator superf 98.08
COG3104 498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 98.07
KOG3574510 consensus Acetyl-CoA transporter [Inorganic ion tr 98.07
TIGR01301 477 GPH_sucrose GPH family sucrose/H+ symporter. This 98.07
TIGR00805 633 oat sodium-independent organic anion transporter. 98.05
PTZ00207 591 hypothetical protein; Provisional 98.05
KOG0254 513 consensus Predicted transporter (major facilitator 98.03
PF06609 599 TRI12: Fungal trichothecene efflux pump (TRI12); I 97.98
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 97.9
KOG0252 538 consensus Inorganic phosphate transporter [Inorgan 97.88
KOG0255 521 consensus Synaptic vesicle transporter SVOP and re 97.83
PF00854372 PTR2: POT family; InterPro: IPR000109 This entry r 97.7
PF00083 451 Sugar_tr: Sugar (and other) transporter; InterPro: 97.56
TIGR00939437 2a57 Equilibrative Nucleoside Transporter (ENT). 97.55
KOG1237571 consensus H+/oligopeptide symporter [Amino acid tr 97.54
KOG3762618 consensus Predicted transporter [General function 97.48
KOG2533 495 consensus Permease of the major facilitator superf 97.4
PF03219491 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 97.39
KOG1479406 consensus Nucleoside transporter [Nucleotide trans 97.39
KOG2325 488 consensus Predicted transporter/transmembrane prot 97.0
PF13000544 Acatn: Acetyl-coenzyme A transporter 1; InterPro: 96.98
KOG3097390 consensus Predicted membrane protein [Function unk 96.78
KOG2816463 consensus Predicted transporter ADD1 (major facili 96.66
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 96.63
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 96.55
COG3202 509 ATP/ADP translocase [Energy production and convers 96.47
KOG0637 498 consensus Sucrose transporter and related proteins 96.43
PF1283277 MFS_1_like: MFS_1 like family 96.42
PF07672267 MFS_Mycoplasma: Mycoplasma MFS transporter; InterP 96.16
KOG2563480 consensus Permease of the major facilitator superf 96.14
PRK03612 521 spermidine synthase; Provisional 95.86
PF05631 354 DUF791: Protein of unknown function (DUF791); Inte 95.56
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 95.43
KOG3880409 consensus Predicted small molecule transporter inv 95.12
COG0477 338 ProP Permeases of the major facilitator superfamil 94.67
KOG3574 510 consensus Acetyl-CoA transporter [Inorganic ion tr 93.19
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 91.74
PF03137 539 OATP: Organic Anion Transporter Polypeptide (OATP) 90.4
TIGR00769 472 AAA ADP/ATP carrier protein family. These proteins 89.37
PF0677985 DUF1228: Protein of unknown function (DUF1228); In 89.09
KOG2601503 consensus Iron transporter [Inorganic ion transpor 88.79
PF06963432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 87.08
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 85.93
COG2119190 Predicted membrane protein [Function unknown] 84.97
PF01733309 Nucleoside_tran: Nucleoside transporter; InterPro: 84.76
KOG3098 461 consensus Uncharacterized conserved protein [Funct 84.04
PF13386199 DsbD_2: Cytochrome C biogenesis protein transmembr 82.93
KOG3626735 consensus Organic anion transporter [Secondary met 80.14
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information 
Probab=100.00  E-value=5.2e-33  Score=243.85  Aligned_cols=334  Identities=63%  Similarity=1.062  Sum_probs=292.1

Q ss_pred             hhHHHHHHHHHHHHHHHhhcccccccCCcCcCCcchhHHHHHHHHHHHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHHH
Q 014832            4 FFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFG   83 (417)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~   83 (417)
                      |++..|.+++++...++..++++++..+++..++.|+..+.+..+...+|++++|++..+++++|+++.|++.++...+.
T Consensus         1 ~~~~~f~~l~~~~~~l~~~~~~~~~~~~~~~f~~Fqr~yl~vY~La~~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~   80 (354)
T PF05631_consen    1 FYYLVFGVLAAVCAALELSKRTKDRASTNPAFRRFQRKYLLVYLLAMAADWLQGPYLYALYESYGFSEHQIAILFVAGFA   80 (354)
T ss_pred             CchhHHHHHHHHHHHHheecccccccccChHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHH
Confidence            46778889999999999888888777777888999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhccccccccccCchHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHH
Q 014832           84 SSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWL  163 (417)
Q Consensus        84 ~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~  163 (417)
                      ...+..++.|.++||+|||+..+..++++++++++-..++++.++++|++.|++.+..+..-+.+++.|+++|+.+.++.
T Consensus        81 Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L  160 (354)
T PF05631_consen   81 SSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWL  160 (354)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHH
Confidence            99999999999999999999999999999999886667899999999999999999999999999999999999999998


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHH
Q 014832          164 SITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAI  243 (417)
Q Consensus       164 ~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (417)
                      ...+......++++-++.++.+++.+.+....|-..||....++..++.+++...|+|+.++..+.++..++.++.++.+
T Consensus       161 ~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~~~a~~~i  240 (354)
T PF05631_consen  161 SDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSFREAWRAI  240 (354)
T ss_pred             HHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHHHHHHHHH
Confidence            88888777666888889999999988887633458899999999888888888899999877555555556667788889


Q ss_pred             hccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHH
Q 014832          244 ASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVS  323 (417)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~  323 (417)
                      .+||+++.+.+...++.+..+.+...|.|....++.+.+.|.+++.++++.++|+.+..++..|. .|+++.+.....+.
T Consensus       241 ~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~~-~~~e~~l~~v~~~a  319 (354)
T PF05631_consen  241 LSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRLLSKS-LRPESLLRYVFAVA  319 (354)
T ss_pred             HcCchhHHHHHHHHHHHHHHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHH
Confidence            99999999999999999999999999999998666678889999999999999999997766653 45557777777777


Q ss_pred             HHHHHHHHHHhhccC
Q 014832          324 SVSLLLPIVTSFLVA  338 (417)
Q Consensus       324 ~~~~~~~~~~~~~~~  338 (417)
                      ++++.++.+......
T Consensus       320 a~~l~~pv~~~~~~~  334 (354)
T PF05631_consen  320 AVSLAIPVVTHIFGQ  334 (354)
T ss_pred             HHHHHHHHHHhhccC
Confidence            777877777755433

>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>KOG3098 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>KOG3762 consensus Predicted transporter [General function prediction only] Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism] Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism] Back     alignment and domain information
>KOG3762 consensus Predicted transporter [General function prediction only] Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions Back     alignment and domain information
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ] Back     alignment and domain information
>KOG3097 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>COG3202 ATP/ADP translocase [Energy production and conversion] Back     alignment and domain information
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS) Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PRK03612 spermidine synthase; Provisional Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only] Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters Back     alignment and domain information
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>COG2119 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs Back     alignment and domain information
>KOG3098 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region Back     alignment and domain information
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query417
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 100.0
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 100.0
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 99.97
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 99.96
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 99.96
2cfq_A417 Lactose permease; transport, transport mechanism, 99.93
2xut_A524 Proton/peptide symporter family protein; transport 99.91
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 99.42
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 99.33
2cfq_A417 Lactose permease; transport, transport mechanism, 99.26
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 99.03
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 98.97
2gfp_A 375 EMRD, multidrug resistance protein D; membrane pro 98.79
2xut_A 524 Proton/peptide symporter family protein; transport 98.7
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
Probab=100.00  E-value=9.9e-32  Score=255.20  Aligned_cols=322  Identities=14%  Similarity=0.143  Sum_probs=237.4

Q ss_pred             hhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-H---hcCchHHHHHH
Q 014832           54 WLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-T---KHSPQYKILMI  129 (417)
Q Consensus        54 ~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~---~~~~~~~~l~~  129 (417)
                      ....+.+|.+.+++|.|+.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+ +   .++++++.+++
T Consensus        43 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  122 (438)
T 3o7q_A           43 NLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLV  122 (438)
T ss_dssp             HHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHHHHHHhccccccHHHHHH
Confidence            3447888899999999999999999999999999999999999999999999999999999999 8   88999999999


Q ss_pred             HHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-hhccCC---------
Q 014832          130 GRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLV-DSFSLG---------  196 (417)
Q Consensus       130 ~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~-~~~~~g---------  196 (417)
                      .|++.|++.+...+.. ..++.|+   ++|++       ..+..... ..+|..+++.+++.+. +.. ..         
T Consensus       123 ~~~l~G~~~~~~~~~~-~~~~~~~~~~~~r~~-------~~~~~~~~-~~~g~~~g~~~~~~l~~~~~-~~~~~~~~~~~  192 (438)
T 3o7q_A          123 GLFIIAAGLGCLETAA-NPFVTVLGPESSGHF-------RLNLAQTF-NSFGAIIAVVFGQSLILSNV-PHQSQDVLDKM  192 (438)
T ss_dssp             HHHHHHHHHHHHHHHH-HHHHHHSSCSTTHHH-------HHHHHHHH-HHHHHHHHHHHTTHHHHTSS-CCCCHHHHHHS
T ss_pred             HHHHHHhhHHHhhhhH-HHHHHHHcCchhHHH-------HHHHHHHH-HHHHHHHHHHHHHHHHhccc-ccccccccccC
Confidence            9999999999998888 6789998   33332       22222222 5556666777776666 332 11         


Q ss_pred             ---------------CchhHHHHHHHHHHHHHHHHh-hccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHH
Q 014832          197 ---------------PVAPFDAAACFLAIGMVIILS-SWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFE  260 (417)
Q Consensus       197 ---------------w~~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (417)
                                     ||+.|++.+...++..++... ..||++++++++ +++++.++++++++|+|+++...+...+..
T Consensus       193 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (438)
T 3o7q_A          193 SPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSD-AKQGSFSASLSRLARIRHWRWAVLAQFCYV  271 (438)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCTTTCCCC-SSTTSHHHHHHHHTTCSHHHHHHHHHHHHH
T ss_pred             CcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCccccccccc-ccccchhhhHHHHHhChHHHHHHHHHHHHH
Confidence                           999998877766655554442 344444332121 222333456788899999888777665544


Q ss_pred             hHHHHHHHhhhccc-cCCCCCCC---hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhc
Q 014832          261 GSMYTFVFLWTPAL-SPNDEEIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFL  336 (417)
Q Consensus       261 ~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~  336 (417)
                      .... ....|.|.| .++..+.+   .+.......++.+++.++.+++.||+++|  +.+..+..+..++.+.....+  
T Consensus       272 ~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~~--  346 (438)
T 3o7q_A          272 GAQT-ACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPH--KVLAAYALIAMALCLISAFAG--  346 (438)
T ss_dssp             HHHH-HHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHH--HHHHHHHHHHHHHHHHHHHCC--
T ss_pred             HHHH-HHHHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcch--HHHHHHHHHHHHHHHHHHHcC--
Confidence            4333 455688998 77754544   36666777889999999999999999887  777777766666555544433  


Q ss_pred             cCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832          337 VAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV  407 (417)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~  407 (417)
                                   +.+ ......+.+++.+..+|...++..|.+|++ ++++.++.. ...++..++....
T Consensus       347 -------------~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~g~~~~~~~~  401 (438)
T 3o7q_A          347 -------------GHV-GLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVM  401 (438)
T ss_dssp             -------------HHH-HHHHHHHHHHHHTTHHHHHHHHHHSSCGGG-HHHHHHHHH-HTTHHHHHHHHHH
T ss_pred             -------------CcH-HHHHHHHHHHHHHHHHHHHHHHHHhhcccc-ccchhhHHH-HHHHHHHHHHHHH
Confidence                         223 344557788888888999999999999977 888887766 3456666665543
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 417
d1pv7a_417 f.38.1.2 (A:) Lactose permease {Escherichia coli [ 8e-04
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

 Score = 39.0 bits (89), Expect = 8e-04
 Identities = 34/351 (9%), Positives = 84/351 (23%), Gaps = 13/351 (3%)

Query: 44  LVYSLMMAGDWLQGPYV-YYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRK 102
           L +           P+   +L+      K + G +F A    S+LF  + G L+DK G +
Sbjct: 14  LFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLR 73

Query: 103 RACVTYCLTY-ILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQ 161
           +  +       ++           +L    ++G I   +      +           +  
Sbjct: 74  KYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVS 133

Query: 162 WLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTE 221
             S        +   +   L      ++    +          A  LA+ +    +    
Sbjct: 134 RRSNFEFGRARMFGCVGWALGASIVGIMFTINNQFVFWLGSGCALILAVLLFFAKTDAPS 193

Query: 222 NYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI 281
           +    +      + F          +      ++  +     Y            +    
Sbjct: 194 SATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFAT 253

Query: 282 PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSN 341
                     + +M     AS +            +   +++   + + I+ S     + 
Sbjct: 254 GEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSAL 313

Query: 342 VKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFF 392
                 +                V        K  +        +TI    
Sbjct: 314 EVVILKTLHM-----------FEVPFLLVGCFKYITSQFEVRFSATIYLVC 353

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query417
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 99.97
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.93
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.39
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 99.2
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=6.5e-30  Score=240.70  Aligned_cols=343  Identities=12%  Similarity=0.060  Sum_probs=232.7

Q ss_pred             cCCcchhHHHHHHHHHHHHhhhh----hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHH
Q 014832           34 AFNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYC  109 (417)
Q Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~  109 (417)
                      ..++++|..+..+++..+...++    ....|.+ +|+|+|++|+|++.+++.+++.++++++|+++||+|||+++..+.
T Consensus        18 ~~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~p~~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~   96 (447)
T d1pw4a_          18 TYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYL-VEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGL   96 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHT-TSSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHH
Confidence            45566777776666665555443    3444444 578999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHH-HhcCc----hHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHH
Q 014832          110 LTYILSCI-TKHSP----QYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAIL  181 (417)
Q Consensus       110 ~~~~~~~~-~~~~~----~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l  181 (417)
                      ++.+++.+ +++++    +++.+++.|++.|++.+...+.. ..++.|+   ++|++       ..+.... +..+|..+
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~i~~~~~~~~r~~-------~~~~~~~-~~~~g~~i  167 (447)
T d1pw4a_          97 ILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPC-GRTMVHWWSQKERGG-------IVSVWNC-AHNVGGGI  167 (447)
T ss_dssp             HHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHH-HHHHHTTCTTTHHHH-------HHHHHHH-HHHHHHTS
T ss_pred             HHHHHHHhhccccchhhhhHHHHHHHHHHHHHhhhhhhhHH-HHHHHHHHHhhcccc-------ccccccc-ccchhhhh
Confidence            99999888 77764    67899999999999999988888 6788888   33333       2222222 24444455


Q ss_pred             HhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCCC-----C-ch---hH--------HHHHHhHHHHHh
Q 014832          182 SGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPS-----E-SK---DL--------LTQFRGAAVAIA  244 (417)
Q Consensus       182 ~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~---~~--------~~~~~~~~~~~~  244 (417)
                      ++.++....+.. .+||+.|++.+.+.++..++.+...++++++.+     + ++   +.        ....+...++.+
T Consensus       168 ~~~~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (447)
T d1pw4a_         168 PPLLFLLGMAWF-NDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVL  246 (447)
T ss_dssp             HHHHHHHHHHHT-CCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCSCTTTCCC-------------CCTHHHHHHTS
T ss_pred             hhhhhhhHhhhh-hcccccchhhhhhHHHHHHHHHHhcccchhhcccchhhhhhhhcccchhhccccccchhhHHHHHHH
Confidence            555555444332 279999999888777766666644444322110     0 00   00        001112345667


Q ss_pred             ccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCCh---hHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHH
Q 014832          245 SDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFV  321 (417)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~  321 (417)
                      +++.++.......+.....+ ....|.|.|+++..+.+.   +.......+..+++.++.+++.||.+++  +.......
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~  323 (447)
T d1pw4a_         247 PNKLLWYIAIANVFVYLLRY-GILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRG--NRGATGVF  323 (447)
T ss_dssp             SCHHHHHHHHHHHHHHHHHH-HHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTT--CHHHHHHH
T ss_pred             cCchHHHHHHHhhhhhhhhh-cchhhhhhhcccccccccchhhhhhhcchhhhhhhhhhhhhhhhhcccc--ccccccch
Confidence            77777777666655444444 455588999988555543   5566777788999999999999999887  33322222


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHH
Q 014832          322 VSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFV  400 (417)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~  400 (417)
                      ..................          +.+...+..++.+++.+...+....+..|.+|++.|+++.|+.+...++++
T Consensus       324 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~g  392 (447)
T d1pw4a_         324 FMTLVTIATIVYWMNPAG----------NPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGG  392 (447)
T ss_dssp             HHHHHHHHHHHTTSCCTT----------CHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhcccc----------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence            222222222222211110          446666777778888888788899999999999999999999887666643
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure