Citrus Sinensis ID: 014884

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410------
Protein Sequence
MSRFSWLRLSRRQLLSSTAVESPINKSHCLQKAATLPQSILHKRGLYYCSSVTGTLADFGTTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT
Secondary Structure (PSIPRED)
ccccccEEEccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccEEEcccccccccccccEEEccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEHHHHHccccEEEEEccccccccccccccccccccccccccccccEEEEccccccccccccccEEcccccccccccEEEEEEEEEEEEcccccccccEEEEcccccccccccccccEEEEEEEccccccEEccccEEEEEEccHHHHccccEEEEEccccEEEEEcccccccccEEEEccccccccccccccccEEEEEEEEccc
Secondary Structure Prediction (SSPRO)
ccccEHHHHcHHHHHccccccccccccHHHHHHHcccHHHHHHccccccccEEccccHccccccccccEEEEcccccHHHcccHHHHHcccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEHHHHHcccEEEEEEccccccccccccccccccccccccccccccEEEEEEEEEcccccccccEEEcccccccccccEEEEEEEEEEEEccccccccEEEEcccccccccccccccEEEEEEEEccccEEEccccEEEEEEEEHHHHHccccEEEEccccEEEEEEccccccccEEEEEcccccccccccccccEEEEEEEEccc
Coil and Loop (DISEMBL)
msrfswlrLSRRQLLSstavespinkshclqkaatlpqsilhkrglyycssvtgtladfgttGMFLARRCIhatgscysskrdpyellgvpenasQDEIKKAFHMLAKqyhpdanknnpsaKRKFQEIRDAYETLRDSEKraqydrrrsrgsenekysagdaegfryagdaeGFRYAYQTHFSDSFHKIFSEIFedetshfapdIQVELVLSFAEAAKgctkhvsfdafvpcdschgrgfpadaktkicstcrgigrvtippftstcstckglgriikdhcmtckgsgvvdgvkevkvtipagvdsgdtirvpeagnaggrgrqhgNLFIKlkvaddpifsrdgadvyvdsniSFTQAilggkvdvptlsgkvqvkipkgvqpgqllVLRGkglaknglfldhgdqyVRFRVNFPT
Flexible Loop (DISEMBL)
msrfswlrlsrRQLLsstavespinkshclqKAATLPQSILHKRGLYYCSSVTGTLADFGTTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQyhpdanknnpsakrKFQEIRDAYetlrdsekraqydrrrsrgsenekysagdaegFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCrgigrvtippftstcSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTipagvdsgdtirvpeagnaggrgrqhgNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVqvkipkgvqpgqLLVLRGKGLAKnglfldhgdqyvRFRVNFPT
Low Complexity Region (SEG)
MsrfswlrlsrrqllssTAVESPINKSHCLQKAATLPQSILHKRGLYYCSSVTGTLADFGTTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT
Disordered region (IsUnstruct)
*************************KSHCLQKAATLPQSILHKRGLYYCSSVTGTLADFGTTGMFLARRCIHATGSCYSSKRDPYELLG**************************************************************************GFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRV*********GRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVN***
Disordered Region (DISOPRED)
**RFSW*RLSRRQL******************************GLYYCSSVTG**********F************YSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEK******EGFRYAGDAEGFRYAYQTHFSDS**********************ELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR**********GRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKN**FLDHGDQYVRFRVNFPT
Disordered Region (DISEMBL)
********LSRRQLLSSTAVESPINKSHCLQKAATLPQSILHKRGLYYCSSVTGTLADFGTTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE******************SAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT
Disordered Region (DISPRO)
*****W******QLLS*TAVESPINKSHCLQKAATLPQSILHKRGLYYCSSVTGTLADFGTTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE*SHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGR*****AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSRFSWLRLSRRQLLSSTAVESPINKSHCLQKAATLPQSILHKRGLYYCSSVTGTLADFGTTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	416	2.2.26 [Sep-21-2011]
Q38813	408	Chaperone protein dnaJ 1,	yes	no	0.817	0.833	0.635	1e-129
Q8K9Y9	378	Chaperone protein DnaJ OS	yes	no	0.778	0.857	0.379	1e-60
Q6F6R1	368	Chaperone protein DnaJ OS	yes	no	0.721	0.815	0.407	6e-60
P0A1G7	379	Chaperone protein DnaJ OS	yes	no	0.781	0.857	0.385	2e-59
P0A1G8	379	Chaperone protein DnaJ OS	N/A	no	0.781	0.857	0.385	2e-59
B4TVZ6	379	Chaperone protein DnaJ OS	yes	no	0.781	0.857	0.385	2e-59
C0Q4F4	379	Chaperone protein DnaJ OS	yes	no	0.781	0.857	0.385	2e-59
A9MXI3	379	Chaperone protein DnaJ OS	yes	no	0.781	0.857	0.385	2e-59
B4T6D7	379	Chaperone protein DnaJ OS	yes	no	0.781	0.857	0.385	2e-59
B4TIB5	379	Chaperone protein DnaJ OS	yes	no	0.781	0.857	0.385	2e-59

>sp|Q38813|DNAJ1_ARATH Chaperone protein dnaJ 1, mitochondrial OS=Arabidopsis thaliana GN=ATJ1 PE=2 SV=2

 Score =  461 bits (1185), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 223/351 (63%), Positives = 274/351 (78%), Gaps = 11/351 (3%)

Query: 66  LARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKF 125
           L  R IHATG   SS R+ Y++LGV   A+++EIKK+FH LAK++HPD N+NNPSAKRKF
Sbjct: 31  LFERYIHATGINNSSARNYYDVLGVSPKATREEIKKSFHELAKKFHPDTNRNNPSAKRKF 90

Query: 126 QEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDS 185
           QEIR+AYETL +SE+R +YD+ + R S+   Y   D       GD+E FR AYQ++FSD+
Sbjct: 91  QEIREAYETLGNSERREEYDKLQYRNSD---YVNNDG------GDSERFRRAYQSNFSDT 141

Query: 186 FHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAK 245
           FHKIFSEIFE+  +   PDI+VEL LS +EAA+GCTK +SFDA+V CDSC G G P+DA 
Sbjct: 142 FHKIFSEIFEN--NQIKPDIRVELSLSLSEAAEGCTKRLSFDAYVFCDSCDGLGHPSDAA 199

Query: 246 TKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305
             IC TCRG+GRVTIPPFT++C TCKG G IIK++CM+C+GSG+V+G K  ++ IP GV+
Sbjct: 200 MSICPTCRGVGRVTIPPFTASCQTCKGTGHIIKEYCMSCRGSGIVEGTKTAELVIPGGVE 259

Query: 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD 365
           S  TI +  AGN   R  Q GNL+IKLKVA+D  F+RDG+D+YVD+NISFTQAILGGKV 
Sbjct: 260 SEATITIVGAGNVSSRTSQPGNLYIKLKVANDSTFTRDGSDIYVDANISFTQAILGGKVV 319

Query: 366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
           VPTLSGK+Q+ IPKG QP QLLVLRGKGL K G F+DHGDQYVRFRVNFPT
Sbjct: 320 VPTLSGKIQLDIPKGTQPDQLLVLRGKGLPKQGFFVDHGDQYVRFRVNFPT 370

Have a continuous role in plant development probably in the structural organization of compartments.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8K9Y9|DNAJ_BUCAP Chaperone protein DnaJ OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=dnaJ PE=3 SV=1

 Score =  234 bits (596), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 130/343 (37%), Positives = 194/343 (56%), Gaps = 19/343 (5%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +K+D Y++LG+P++A + EIKKA+  LA +YHPD N+ + +A+ KF+EI++AYE L + E
Sbjct: 2   AKKDYYQILGIPKSAEEREIKKAYKRLAMKYHPDRNQGDKNAENKFKEIKEAYEILINEE 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIF---ED 196
           KR  YD+      EN     G  +   Y+       +   T F D F  +F +IF    +
Sbjct: 62  KRTAYDQYGHAAFEN-----GYNQNNTYS------TFTSSTDFGDIFGDVFGDIFGGSRN 110

Query: 197 ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIG 256
           +      D+   + +S  EA KG TK +    F  C +C+G G     K   CSTC G G
Sbjct: 111 QRVKKGADLCYNMEISLEEAVKGTTKEIRIPTFQKCKTCYGMGTSTGTKPNGCSTCHGKG 170

Query: 257 RVTIPP--FT--STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRV 312
           ++ I    FT   +C TC G+G +IK+ C  C+G G +   K + V IP G+D+ D IR+
Sbjct: 171 QIHIRKGFFTVQQSCPTCNGIGTVIKNPCRMCRGQGRIKTNKTLSVKIPPGIDTNDKIRL 230

Query: 313 PEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK 372
            + G AG  G Q G+L++++KV   PIF R+  ++Y +  I+FT A LGG+++VPTL G+
Sbjct: 231 SKEGEAGTNGAQPGDLYVQMKVNKHPIFEREENNLYCEVPINFTMAALGGEIEVPTLDGR 290

Query: 373 VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP 415
           V +KIP   Q G+L  +RGKG+ K+      GD   R  V  P
Sbjct: 291 VNLKIPSETQSGKLFRIRGKGV-KSVQSRSRGDLLCRVVVETP 332

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) (taxid: 198804)

>sp|Q6F6R1|DNAJ_ACIAD Chaperone protein DnaJ OS=Acinetobacter sp. (strain ADP1) GN=dnaJ PE=3 SV=1

 Score =  231 bits (590), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 132/324 (40%), Positives = 186/324 (57%), Gaps = 24/324 (7%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +KRD YE+LGV + AS DEIKKA+  LA +YHPD N +N  A+ KF+E  +AYE L DSE
Sbjct: 2   AKRDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEDKFKEASEAYEVLSDSE 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIF----- 194
           KR+ YDR                  F   G      ++ +  FS  F  IF   F     
Sbjct: 62  KRSMYDRM-------------GHNAFEGGGGGGFGGFSAEDIFS-QFGDIFGGAFGGGGR 107

Query: 195 EDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRG 254
           + +      D++  + LS  EA +G  K ++F A  PC+ C G+G       + C TC G
Sbjct: 108 QQQRQRRGSDLRYVMELSLEEAVRGVKKTITFTAPAPCEVCDGKGSKNPNDVETCRTCHG 167

Query: 255 IGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTI 310
            G+V +         TC TC+G G+IIK+ C +C GSGV D  + ++VTIPAGVD+GD +
Sbjct: 168 TGQVRMQQGFFSVQQTCGTCRGQGKIIKNPCQSCHGSGVADRQQTLEVTIPAGVDNGDRV 227

Query: 311 RVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLS 370
           R+   G A  R  Q G+L++++ V +  IF RDGAD+Y+D  +S   A LG ++++PTL 
Sbjct: 228 RLSGKGEA-VRDGQAGDLYVEVVVREHEIFQRDGADLYMDVPVSIADAALGKEIEIPTLE 286

Query: 371 GKVQVKIPKGVQPGQLLVLRGKGL 394
           G+V +KIP+G Q G+L  LRGKG+
Sbjct: 287 GRVSLKIPEGTQTGKLFRLRGKGV 310

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Acinetobacter sp. (strain ADP1) (taxid: 62977)

>sp|P0A1G7|DNAJ_SALTY Chaperone protein DnaJ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=dnaJ PE=3 SV=2

 Score =  229 bits (585), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/345 (38%), Positives = 189/345 (54%), Gaps = 20/345 (5%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +KRD YE+LGV + A + EIKKA+  LA +YHPD N+ +  A+ KF+EI++AYE L D++
Sbjct: 2   AKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQ 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--- 196
           KRA YD+      E      G   GF    D           FSD F  +F +IF     
Sbjct: 62  KRAAYDQYGHAAFEQGGMGGGFGGGFNGGAD-----------FSDIFGDVFGDIFGGGRG 110

Query: 197 -ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGI 255
            + +    D++  + L+  EA +G TK +       CD CHG G  A  + + C TC G 
Sbjct: 111 RQRAARGADLRYNMDLTLEEAVRGVTKEIRIPTLEECDVCHGSGAKAGTQPQTCPTCHGS 170

Query: 256 GRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR 311
           G+V +         TC  C+G G +IKD C  C G G V+  K + V IPAGVD+GD IR
Sbjct: 171 GQVQMRQGFFAVQQTCPHCQGRGTLIKDPCHKCHGHGRVEKSKTLSVKIPAGVDTGDRIR 230

Query: 312 VPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG 371
           +   G AG  G   G+L+++++V   PIF R+G ++Y +  I+F  A LGG+++VPTL G
Sbjct: 231 LAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDG 290

Query: 372 KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
           +V +K+P   Q G+L  +RGKG+ K+      GD   R  V  P 
Sbjct: 291 RVMLKVPSETQTGKLFRMRGKGV-KSVRGGAQGDLLCRVVVETPV 334

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity). Necessary for invasion of epithelial cells, secretion of invasion proteins and proliferation within macrophages.

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

>sp|P0A1G8|DNAJ_SALTI Chaperone protein DnaJ OS=Salmonella typhi GN=dnaJ PE=3 SV=2

 Score =  229 bits (585), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/345 (38%), Positives = 189/345 (54%), Gaps = 20/345 (5%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +KRD YE+LGV + A + EIKKA+  LA +YHPD N+ +  A+ KF+EI++AYE L D++
Sbjct: 2   AKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQ 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--- 196
           KRA YD+      E      G   GF    D           FSD F  +F +IF     
Sbjct: 62  KRAAYDQYGHAAFEQGGMGGGFGGGFNGGAD-----------FSDIFGDVFGDIFGGGRG 110

Query: 197 -ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGI 255
            + +    D++  + L+  EA +G TK +       CD CHG G  A  + + C TC G 
Sbjct: 111 RQRAARGADLRYNMDLTLEEAVRGVTKEIRIPTLEECDVCHGSGAKAGTQPQTCPTCHGS 170

Query: 256 GRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR 311
           G+V +         TC  C+G G +IKD C  C G G V+  K + V IPAGVD+GD IR
Sbjct: 171 GQVQMRQGFFAVQQTCPHCQGRGTLIKDPCHKCHGHGRVEKSKTLSVKIPAGVDTGDRIR 230

Query: 312 VPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG 371
           +   G AG  G   G+L+++++V   PIF R+G ++Y +  I+F  A LGG+++VPTL G
Sbjct: 231 LAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDG 290

Query: 372 KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
           +V +K+P   Q G+L  +RGKG+ K+      GD   R  V  P 
Sbjct: 291 RVMLKVPSETQTGKLFRMRGKGV-KSVRGGAQGDLLCRVVVETPV 334

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Salmonella typhi (taxid: 90370)

>sp|B4TVZ6|DNAJ_SALSV Chaperone protein DnaJ OS=Salmonella schwarzengrund (strain CVM19633) GN=dnaJ PE=3 SV=1

 Score =  229 bits (585), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/345 (38%), Positives = 189/345 (54%), Gaps = 20/345 (5%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +KRD YE+LGV + A + EIKKA+  LA +YHPD N+ +  A+ KF+EI++AYE L D++
Sbjct: 2   AKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQ 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--- 196
           KRA YD+      E      G   GF    D           FSD F  +F +IF     
Sbjct: 62  KRAAYDQYGHAAFEQGGMGGGFGGGFNGGAD-----------FSDIFGDVFGDIFGGGRG 110

Query: 197 -ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGI 255
            + +    D++  + L+  EA +G TK +       CD CHG G  A  + + C TC G 
Sbjct: 111 RQRAARGADLRYNMDLTLEEAVRGVTKEIRIPTLEECDVCHGSGAKAGTQPQTCPTCHGS 170

Query: 256 GRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR 311
           G+V +         TC  C+G G +IKD C  C G G V+  K + V IPAGVD+GD IR
Sbjct: 171 GQVQMRQGFFAVQQTCPHCQGRGTLIKDPCHKCHGHGRVEKSKTLSVKIPAGVDTGDRIR 230

Query: 312 VPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG 371
           +   G AG  G   G+L+++++V   PIF R+G ++Y +  I+F  A LGG+++VPTL G
Sbjct: 231 LAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDG 290

Query: 372 KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
           +V +K+P   Q G+L  +RGKG+ K+      GD   R  V  P 
Sbjct: 291 RVMLKVPSETQTGKLFRMRGKGV-KSVRGGAQGDLLCRVVVETPV 334

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Salmonella schwarzengrund (strain CVM19633) (taxid: 439843)

>sp|C0Q4F4|DNAJ_SALPC Chaperone protein DnaJ OS=Salmonella paratyphi C (strain RKS4594) GN=dnaJ PE=3 SV=1

 Score =  229 bits (585), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/345 (38%), Positives = 189/345 (54%), Gaps = 20/345 (5%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +KRD YE+LGV + A + EIKKA+  LA +YHPD N+ +  A+ KF+EI++AYE L D++
Sbjct: 2   AKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQ 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--- 196
           KRA YD+      E      G   GF    D           FSD F  +F +IF     
Sbjct: 62  KRAAYDQYGHAAFEQGGMGGGFGGGFNGGAD-----------FSDIFGDVFGDIFGGGRG 110

Query: 197 -ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGI 255
            + +    D++  + L+  EA +G TK +       CD CHG G  A  + + C TC G 
Sbjct: 111 RQRAARGADLRYNMDLTLEEAVRGVTKEIRIPTLEECDVCHGSGAKAGTQPQTCPTCHGS 170

Query: 256 GRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR 311
           G+V +         TC  C+G G +IKD C  C G G V+  K + V IPAGVD+GD IR
Sbjct: 171 GQVQMRQGFFAVQQTCPHCQGRGTLIKDPCHKCHGHGRVEKSKTLSVKIPAGVDTGDRIR 230

Query: 312 VPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG 371
           +   G AG  G   G+L+++++V   PIF R+G ++Y +  I+F  A LGG+++VPTL G
Sbjct: 231 LAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDG 290

Query: 372 KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
           +V +K+P   Q G+L  +RGKG+ K+      GD   R  V  P 
Sbjct: 291 RVMLKVPSETQTGKLFRMRGKGV-KSVRGGAQGDLLCRVVVETPV 334

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Salmonella paratyphi C (strain RKS4594) (taxid: 476213)

>sp|A9MXI3|DNAJ_SALPB Chaperone protein DnaJ OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=dnaJ PE=3 SV=1

 Score =  229 bits (585), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/345 (38%), Positives = 189/345 (54%), Gaps = 20/345 (5%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +KRD YE+LGV + A + EIKKA+  LA +YHPD N+ +  A+ KF+EI++AYE L D++
Sbjct: 2   AKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQ 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--- 196
           KRA YD+      E      G   GF    D           FSD F  +F +IF     
Sbjct: 62  KRAAYDQYGHAAFEQGGMGGGFGGGFNGGAD-----------FSDIFGDVFGDIFGGGRG 110

Query: 197 -ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGI 255
            + +    D++  + L+  EA +G TK +       CD CHG G  A  + + C TC G 
Sbjct: 111 RQRAARGADLRYNMDLTLEEAVRGVTKEIRIPTLEECDVCHGSGAKAGTQPQTCPTCHGS 170

Query: 256 GRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR 311
           G+V +         TC  C+G G +IKD C  C G G V+  K + V IPAGVD+GD IR
Sbjct: 171 GQVQMRQGFFAVQQTCPHCQGRGTLIKDPCHKCHGHGRVEKSKTLSVKIPAGVDTGDRIR 230

Query: 312 VPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG 371
           +   G AG  G   G+L+++++V   PIF R+G ++Y +  I+F  A LGG+++VPTL G
Sbjct: 231 LAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDG 290

Query: 372 KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
           +V +K+P   Q G+L  +RGKG+ K+      GD   R  V  P 
Sbjct: 291 RVMLKVPSETQTGKLFRMRGKGV-KSVRGGAQGDLLCRVVVETPV 334

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) (taxid: 1016998)

>sp|B4T6D7|DNAJ_SALNS Chaperone protein DnaJ OS=Salmonella newport (strain SL254) GN=dnaJ PE=3 SV=1

 Score =  229 bits (585), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/345 (38%), Positives = 189/345 (54%), Gaps = 20/345 (5%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +KRD YE+LGV + A + EIKKA+  LA +YHPD N+ +  A+ KF+EI++AYE L D++
Sbjct: 2   AKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQ 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--- 196
           KRA YD+      E      G   GF    D           FSD F  +F +IF     
Sbjct: 62  KRAAYDQYGHAAFEQGGMGGGFGGGFNGGAD-----------FSDIFGDVFGDIFGGGRG 110

Query: 197 -ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGI 255
            + +    D++  + L+  EA +G TK +       CD CHG G  A  + + C TC G 
Sbjct: 111 RQRAARGADLRYNMDLTLEEAVRGVTKEIRIPTLEECDVCHGSGAKAGTQPQTCPTCHGS 170

Query: 256 GRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR 311
           G+V +         TC  C+G G +IKD C  C G G V+  K + V IPAGVD+GD IR
Sbjct: 171 GQVQMRQGFFAVQQTCPHCQGRGTLIKDPCHKCHGHGRVEKSKTLSVKIPAGVDTGDRIR 230

Query: 312 VPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG 371
           +   G AG  G   G+L+++++V   PIF R+G ++Y +  I+F  A LGG+++VPTL G
Sbjct: 231 LAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDG 290

Query: 372 KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
           +V +K+P   Q G+L  +RGKG+ K+      GD   R  V  P 
Sbjct: 291 RVMLKVPSETQTGKLFRMRGKGV-KSVRGGAQGDLLCRVVVETPV 334

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Salmonella newport (strain SL254) (taxid: 423368)

>sp|B4TIB5|DNAJ_SALHS Chaperone protein DnaJ OS=Salmonella heidelberg (strain SL476) GN=dnaJ PE=3 SV=1

 Score =  229 bits (585), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/345 (38%), Positives = 189/345 (54%), Gaps = 20/345 (5%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +KRD YE+LGV + A + EIKKA+  LA +YHPD N+ +  A+ KF+EI++AYE L D++
Sbjct: 2   AKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQ 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--- 196
           KRA YD+      E      G   GF    D           FSD F  +F +IF     
Sbjct: 62  KRAAYDQYGHAAFEQGGMGGGFGGGFNGGAD-----------FSDIFGDVFGDIFGGGRG 110

Query: 197 -ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGI 255
            + +    D++  + L+  EA +G TK +       CD CHG G  A  + + C TC G 
Sbjct: 111 RQRAARGADLRYNMDLTLEEAVRGVTKEIRIPTLEECDVCHGSGAKAGTQPQTCPTCHGS 170

Query: 256 GRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR 311
           G+V +         TC  C+G G +IKD C  C G G V+  K + V IPAGVD+GD IR
Sbjct: 171 GQVQMRQGFFAVQQTCPHCQGRGTLIKDPCHKCHGHGRVEKSKTLSVKIPAGVDTGDRIR 230

Query: 312 VPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG 371
           +   G AG  G   G+L+++++V   PIF R+G ++Y +  I+F  A LGG+++VPTL G
Sbjct: 231 LAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDG 290

Query: 372 KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
           +V +K+P   Q G+L  +RGKG+ K+      GD   R  V  P 
Sbjct: 291 RVMLKVPSETQTGKLFRMRGKGV-KSVRGGAQGDLLCRVVVETPV 334

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Salmonella heidelberg (strain SL476) (taxid: 454169)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	416
255545870	494	chaperone protein DNAj, putative [Ricinu	0.997	0.840	0.693	1e-162
302142020	470	unnamed protein product [Vitis vinifera]	0.954	0.844	0.674	1e-160
225459166	462	PREDICTED: chaperone protein dnaJ 1, mit	0.930	0.837	0.690	1e-160
449515496	444	PREDICTED: chaperone protein dnaJ 1, mit	0.975	0.914	0.653	1e-153
449470084	460	PREDICTED: chaperone protein dnaJ 1, mit	0.995	0.9	0.643	1e-150
356498819	445	PREDICTED: chaperone protein dnaJ 1, mit	0.973	0.910	0.658	1e-148
30690263	408	chaperone protein dnaJ 1 [Arabidopsis th	0.817	0.833	0.635	1e-127
26451496	408	putative AtJ1 [Arabidopsis thaliana]	0.817	0.833	0.635	1e-127
15217871	427	chaperone protein dnaJ 1 [Arabidopsis th	0.817	0.796	0.635	1e-127
297845768	427	hypothetical protein ARALYDRAFT_473029 [	0.817	0.796	0.632	1e-126

>gi|255545870|ref|XP_002513995.1| chaperone protein DNAj, putative [Ricinus communis] gi|223547081|gb|EEF48578.1| chaperone protein DNAj, putative [Ricinus communis]

 Score =  577 bits (1486), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 299/431 (69%), Positives = 345/431 (80%), Gaps = 16/431 (3%)

Query: 1   MSRFSWLRL--SRRQLLSSTAVESPINKSHCLQKAATLPQSILHKRGLYYCSSVTGTLAD 58
           M R+ WL     RR LLSS AVES +N+ H  +K +TL Q +   R  + CS V    + 
Sbjct: 1   MGRYGWLATLCRRRHLLSSAAVESTVNRGHWHRKISTLRQHLCRDRCFHSCSFVIAKRSG 60

Query: 59  -FGTTGM-FLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANK 116
             GT  M  L  R IHATG+C + +   YE+LGV ENASQDEIKKAFH+LAK+YHPDANK
Sbjct: 61  CLGTAEMQSLKCRYIHATGTCNAKEPSYYEILGVSENASQDEIKKAFHLLAKKYHPDANK 120

Query: 117 NNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG----------DAEGFR 166
           NNPSAKR FQEIR+AYETL+DSEKRAQYD R +R SE  +Y A           DA  FR
Sbjct: 121 NNPSAKRNFQEIREAYETLKDSEKRAQYDTRHARSSEKVEYGANFADWFGHGAEDAARFR 180

Query: 167 Y-AGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVS 225
           Y AG+ +GF Y+YQT+FSDSFHKIFSEIFED  +  A DIQVELVLSF EAA+GCTKH+S
Sbjct: 181 YGAGNGKGFSYSYQTNFSDSFHKIFSEIFED-ANQSASDIQVELVLSFTEAARGCTKHLS 239

Query: 226 FDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCK 285
           FDAFVPCDSC GRGFP DAKT++C  CRGIG++TIPPFTSTCS+CKG GRII+++CM+C+
Sbjct: 240 FDAFVPCDSCDGRGFPIDAKTRVCPACRGIGKITIPPFTSTCSSCKGSGRIIEEYCMSCR 299

Query: 286 GSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGA 345
           GSGVV+GVKEVKVT+PAG+DSGDTIRVPEAGNAGGRG Q GNLFI LKV DDP+F+RDG 
Sbjct: 300 GSGVVEGVKEVKVTVPAGIDSGDTIRVPEAGNAGGRGHQPGNLFISLKVEDDPVFTRDGV 359

Query: 346 DVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGD 405
           DVYVD+NISFTQAILGGKVDVPTLSGK Q+KIPKGVQPGQLLVLRGKGL K+G  +DHGD
Sbjct: 360 DVYVDANISFTQAILGGKVDVPTLSGKFQIKIPKGVQPGQLLVLRGKGLPKHGFLVDHGD 419

Query: 406 QYVRFRVNFPT 416
           Q+VRFR+NFPT
Sbjct: 420 QFVRFRINFPT 430

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142020|emb|CBI19223.3| unnamed protein product [Vitis vinifera]

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 288/427 (67%), Positives = 342/427 (80%), Gaps = 30/427 (7%)

Query: 1   MSRFSWLRLSRRQLLSSTAVE-SPINKSHCLQKAATLPQSILHKRGLYYCSSVTGTLADF 59
           M RF WL L +R L S++A++  PI   HC   A      ++H+R L+  + + G  +DF
Sbjct: 1   MGRFGWLGLCKRHLQSTSAIDFLPIE--HCRVPA------LIHQRILHGYNVLHGKPSDF 52

Query: 60  GTTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP 119
            T G+  A R IHATG CYS++R+ YE+LGVP+NAS+DEIKKAFH+LAK++HPDANKNNP
Sbjct: 53  ATMGIPSATRYIHATGICYSTERNYYEILGVPQNASRDEIKKAFHVLAKKFHPDANKNNP 112

Query: 120 SAKRKFQEIRDAYETLRDSEKRAQYDR--RRSRGSENEKYSAGDAEGFRYAGDAEGFRYA 177
            AKRKFQEIRDAYETL+DSEKRAQYDR    S  SE+ K +AGD           GFRYA
Sbjct: 113 YAKRKFQEIRDAYETLQDSEKRAQYDRVPTLSHFSESVKDAAGD-----------GFRYA 161

Query: 178 YQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHG 237
           Y++HFSDSF KIF+EIFE ET +FA DIQVEL LSF+EAAKGCTKH+SFDA++PCDSC+G
Sbjct: 162 YRSHFSDSFRKIFAEIFEHETENFATDIQVELSLSFSEAAKGCTKHLSFDAYIPCDSCYG 221

Query: 238 RGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVK 297
           RG P DAKTK+C  C+GIGRVTIPPFTSTCS+CKGLGRI+K+HC TC+GSGVV+GVK+V+
Sbjct: 222 RGHPVDAKTKVCPICKGIGRVTIPPFTSTCSSCKGLGRIVKEHCTTCRGSGVVEGVKDVE 281

Query: 298 VTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLK--------VADDPIFSRDGADVYV 349
           V IPAGVDSGDTI VP+ GNAGGRG + GNL+IKLK        VA D  F RDGADVYV
Sbjct: 282 VVIPAGVDSGDTIHVPKVGNAGGRGVEPGNLYIKLKAQLYLFHSVAKDRTFVRDGADVYV 341

Query: 350 DSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVR 409
           +S+ISFTQAILGG V+VPTLSGK+Q+KIPKGVQPGQLLVLRGKGL K+GL +DHGDQYVR
Sbjct: 342 ESSISFTQAILGGTVEVPTLSGKMQLKIPKGVQPGQLLVLRGKGLPKHGLLVDHGDQYVR 401

Query: 410 FRVNFPT 416
           FR+NFPT
Sbjct: 402 FRINFPT 408

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459166|ref|XP_002283963.1| PREDICTED: chaperone protein dnaJ 1, mitochondrial-like [Vitis vinifera]

 Score =  570 bits (1469), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 281/407 (69%), Positives = 336/407 (82%), Gaps = 20/407 (4%)

Query: 11  RRQLLSSTAVE-SPINKSHCLQKAATLPQSILHKRGLYYCSSVTGTLADFGTTGMFLARR 69
           +R L S++A++  PI   HC   A      ++H+R L+  + + G  +DF T G+  A R
Sbjct: 13  KRHLQSTSAIDFLPIE--HCRVPA------LIHQRILHGYNVLHGKPSDFATMGIPSATR 64

Query: 70  CIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIR 129
            IHATG CYS++R+ YE+LGVP+NAS+DEIKKAFH+LAK++HPDANKNNP AKRKFQEIR
Sbjct: 65  YIHATGICYSTERNYYEILGVPQNASRDEIKKAFHVLAKKFHPDANKNNPYAKRKFQEIR 124

Query: 130 DAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKI 189
           DAYETL+DSEKRAQYDR  +  SE+ K +AGD           GFRYAY++HFSDSF KI
Sbjct: 125 DAYETLQDSEKRAQYDRECTMSSESVKDAAGD-----------GFRYAYRSHFSDSFRKI 173

Query: 190 FSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKIC 249
           F+EIFE ET +FA DIQVEL LSF+EAAKGCTKH+SFDA++PCDSC+GRG P DAKTK+C
Sbjct: 174 FAEIFEHETENFATDIQVELSLSFSEAAKGCTKHLSFDAYIPCDSCYGRGHPVDAKTKVC 233

Query: 250 STCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309
             C+GIGRVTIPPFTSTCS+CKGLGRI+K+HC TC+GSGVV+GVK+V+V IPAGVDSGDT
Sbjct: 234 PICKGIGRVTIPPFTSTCSSCKGLGRIVKEHCTTCRGSGVVEGVKDVEVVIPAGVDSGDT 293

Query: 310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTL 369
           I VP+ GNAGGRG + GNL+IKLKVA D  F RDGADVYV+S+ISFTQAILGG V+VPTL
Sbjct: 294 IHVPKVGNAGGRGVEPGNLYIKLKVAKDRTFVRDGADVYVESSISFTQAILGGTVEVPTL 353

Query: 370 SGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
           SGK+Q+KIPKGVQPGQLLVLRGKGL K+GL +DHGDQYVRFR+NFPT
Sbjct: 354 SGKMQLKIPKGVQPGQLLVLRGKGLPKHGLLVDHGDQYVRFRINFPT 400

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449515496|ref|XP_004164785.1| PREDICTED: chaperone protein dnaJ 1, mitochondrial-like [Cucumis sativus]

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 272/416 (65%), Positives = 318/416 (76%), Gaps = 10/416 (2%)

Query: 1   MSRFSWLRLSRRQLLSSTAVESPINKSHCLQKAATLPQSILHKRGLYYCSSVTGTLADFG 60
           M R  WL L RRQLLSS  V   I+    L K ++L Q     R L    S  G   DF 
Sbjct: 1   MKRLGWLGLCRRQLLSSEGVGPSIDLPLSLGKVSSLRQFFTCARALQAFPSAVGNGPDFA 60

Query: 61  TTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS 120
           T     +R  IH+TGSC S +RD YE+LGV  NAS++EIKKA+H LAK+YHPDANKNNPS
Sbjct: 61  TA-FPGSRHFIHSTGSCCSIERDYYEILGVQHNASREEIKKAYHALAKKYHPDANKNNPS 119

Query: 121 AKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQT 180
           AKRKFQEIR+AYETL+DSEKR+QYD+R    SEN  + AGDAEGF Y          Y+T
Sbjct: 120 AKRKFQEIREAYETLQDSEKRSQYDQRHGGESENVGFGAGDAEGFSYT---------YRT 170

Query: 181 HFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGF 240
           HFSDSF KIFSEIFE ET     DIQV+L+LSFAEAAKGCTK +SFDA VPCDSC+GRG+
Sbjct: 171 HFSDSFQKIFSEIFEHETGRLPSDIQVDLLLSFAEAAKGCTKDLSFDALVPCDSCYGRGY 230

Query: 241 PADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTI 300
           P +A  + C TCRG+GRVTIPPFTSTC+TC+G G+II++ C  C+G GVV+GV +V VTI
Sbjct: 231 PVNASKRSCPTCRGLGRVTIPPFTSTCTTCRGSGQIIEESCGQCRGMGVVEGVMKVTVTI 290

Query: 301 PAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAIL 360
           PAGVDSGDTIRVPEAGN+GGR    GNL IKLKVA+D +F RDG D+YVDSNISFTQAIL
Sbjct: 291 PAGVDSGDTIRVPEAGNSGGRDTHPGNLIIKLKVAEDHVFKRDGVDIYVDSNISFTQAIL 350

Query: 361 GGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
           GGKV+VPTLSG++Q+++PKGVQPGQLL LRGKGL K+G F+D GDQYVRFR+ FPT
Sbjct: 351 GGKVEVPTLSGRMQIEVPKGVQPGQLLTLRGKGLPKHGFFVDRGDQYVRFRIKFPT 406

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449470084|ref|XP_004152748.1| PREDICTED: chaperone protein dnaJ 1, mitochondrial-like [Cucumis sativus]

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 273/424 (64%), Positives = 321/424 (75%), Gaps = 10/424 (2%)

Query: 1   MSRFSWLRLSRRQLLSSTAVESPINKSHCLQKAATLPQSILHKRGLYYCSSVTGTLADFG 60
           M R  WL L RRQLLSS  V   I+    L K  +L Q     R L    S  G   DF 
Sbjct: 1   MKRLGWLGLCRRQLLSSEGVGPSIDLRLSLGKVPSLRQFFTCARALQAFPSAVGNGPDFA 60

Query: 61  TTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS 120
           T     +R  IH+TGSC S +RD YE+LGV  NAS++EIKKA+H LAK+YHPDANKNNPS
Sbjct: 61  TA-FPGSRHFIHSTGSCCSIERDYYEILGVQHNASREEIKKAYHALAKKYHPDANKNNPS 119

Query: 121 AKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYS-------AGDAEGFRY-AGDAE 172
           AKRKFQEIR+AYETL+DSEKR+QYD+  +     EKY         G++E   + AGDAE
Sbjct: 120 AKRKFQEIREAYETLQDSEKRSQYDQV-AFPKLLEKYPIGFCCLHGGESENVGFGAGDAE 178

Query: 173 GFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC 232
           GF Y Y+THFSDSF KIFSEIFE ET     DIQV+L+LSFAEAAKGCTK +SFDA VPC
Sbjct: 179 GFSYTYRTHFSDSFQKIFSEIFEHETGRLPSDIQVDLLLSFAEAAKGCTKDLSFDALVPC 238

Query: 233 DSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDG 292
           DSC+GRG+P +A  + C TCRG+GRVTIPPFTSTC+TC+G G+II++ C  C+G GVV+G
Sbjct: 239 DSCYGRGYPVNASKRSCPTCRGLGRVTIPPFTSTCTTCRGSGQIIEESCGQCRGMGVVEG 298

Query: 293 VKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSN 352
           V +V VTIPAGVDSGDTIRVPEAGN+GGR    GNL IKLKVA+D +F RDG D+YVDSN
Sbjct: 299 VMKVTVTIPAGVDSGDTIRVPEAGNSGGRDTHPGNLIIKLKVAEDHVFKRDGVDIYVDSN 358

Query: 353 ISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRV 412
           ISFTQAILGGKV+VPTLSG++Q+++PKGVQPGQLL LRGKGL K+G F+D GDQYVRFR+
Sbjct: 359 ISFTQAILGGKVEVPTLSGRMQIEVPKGVQPGQLLTLRGKGLPKHGFFVDRGDQYVRFRI 418

Query: 413 NFPT 416
            FPT
Sbjct: 419 KFPT 422

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356498819|ref|XP_003518246.1| PREDICTED: chaperone protein dnaJ 1, mitochondrial-like [Glycine max]

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 274/416 (65%), Positives = 319/416 (76%), Gaps = 11/416 (2%)

Query: 1   MSRFSWLRLSRRQLLSSTAVESPINKSH-CLQKAATLPQSILHKRGLYYCSSVTGTLADF 59
           M RF+W    RR LLSS   ES ++K      K ++  QS L  R L  C  VT T  + 
Sbjct: 1   MRRFAWFTPYRRHLLSSLTSESLVDKGESTFTKFSSSRQSFLLARALVNCGFVTKT-EES 59

Query: 60  GTTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP 119
               + L  R  HAT    S+ RD Y  LGVPENASQDEIKKAFH LAK+YHPDANKNNP
Sbjct: 60  RIPRVPLRYRYFHATAFSSSADRDHYGTLGVPENASQDEIKKAFHSLAKKYHPDANKNNP 119

Query: 120 SAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQ 179
           SAKRKFQ+IR+AYETLRDS+KRA+YD+ R+RGSE+ +Y   DAE FR A         Y+
Sbjct: 120 SAKRKFQDIREAYETLRDSKKRAEYDKMRTRGSEDIEYDRDDAERFRNA---------YR 170

Query: 180 THFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRG 239
           +HFSDSFHK+F EIFE+ T+ F+ +I+VEL L+F+EAA+GCTKHVSFDA VPCD C+G+G
Sbjct: 171 SHFSDSFHKVFYEIFEEATTQFSSNIEVELSLTFSEAARGCTKHVSFDALVPCDHCNGQG 230

Query: 240 FPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVT 299
           +P DA  K+C TCRG GRVTIPPFTSTC TCKG GRIIKD C+TC GSG V+GVKEVKVT
Sbjct: 231 YPLDAIPKVCPTCRGSGRVTIPPFTSTCITCKGSGRIIKDSCLTCGGSGAVEGVKEVKVT 290

Query: 300 IPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAI 359
           IPAGVDSGDTI VPE GNA G G + G+L+IK+KV +D IF RDGAD+YVDSNISFTQAI
Sbjct: 291 IPAGVDSGDTIHVPEGGNAAGSGGRPGSLYIKIKVTEDSIFVRDGADIYVDSNISFTQAI 350

Query: 360 LGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP 415
           LGGKV+VPTLSGK+Q+KIPKGVQ GQLLVLRGKGL K+G  + HGDQYVRFRVN P
Sbjct: 351 LGGKVEVPTLSGKMQLKIPKGVQHGQLLVLRGKGLPKHGFLVHHGDQYVRFRVNLP 406

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30690263|ref|NP_849719.1| chaperone protein dnaJ 1 [Arabidopsis thaliana] gi|66774115|sp|Q38813.2|DNAJ1_ARATH RecName: Full=Chaperone protein dnaJ 1, mitochondrial; Short=AtDjB1; Short=AtJ1; Flags: Precursor gi|332192810|gb|AEE30931.1| chaperone protein dnaJ 1 [Arabidopsis thaliana]

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 223/351 (63%), Positives = 274/351 (78%), Gaps = 11/351 (3%)

Query: 66  LARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKF 125
           L  R IHATG   SS R+ Y++LGV   A+++EIKK+FH LAK++HPD N+NNPSAKRKF
Sbjct: 31  LFERYIHATGINNSSARNYYDVLGVSPKATREEIKKSFHELAKKFHPDTNRNNPSAKRKF 90

Query: 126 QEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDS 185
           QEIR+AYETL +SE+R +YD+ + R S+   Y   D       GD+E FR AYQ++FSD+
Sbjct: 91  QEIREAYETLGNSERREEYDKLQYRNSD---YVNNDG------GDSERFRRAYQSNFSDT 141

Query: 186 FHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAK 245
           FHKIFSEIFE+  +   PDI+VEL LS +EAA+GCTK +SFDA+V CDSC G G P+DA 
Sbjct: 142 FHKIFSEIFEN--NQIKPDIRVELSLSLSEAAEGCTKRLSFDAYVFCDSCDGLGHPSDAA 199

Query: 246 TKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305
             IC TCRG+GRVTIPPFT++C TCKG G IIK++CM+C+GSG+V+G K  ++ IP GV+
Sbjct: 200 MSICPTCRGVGRVTIPPFTASCQTCKGTGHIIKEYCMSCRGSGIVEGTKTAELVIPGGVE 259

Query: 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD 365
           S  TI +  AGN   R  Q GNL+IKLKVA+D  F+RDG+D+YVD+NISFTQAILGGKV 
Sbjct: 260 SEATITIVGAGNVSSRTSQPGNLYIKLKVANDSTFTRDGSDIYVDANISFTQAILGGKVV 319

Query: 366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
           VPTLSGK+Q+ IPKG QP QLLVLRGKGL K G F+DHGDQYVRFRVNFPT
Sbjct: 320 VPTLSGKIQLDIPKGTQPDQLLVLRGKGLPKQGFFVDHGDQYVRFRVNFPT 370

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|26451496|dbj|BAC42846.1| putative AtJ1 [Arabidopsis thaliana]

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 223/351 (63%), Positives = 274/351 (78%), Gaps = 11/351 (3%)

Query: 66  LARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKF 125
           L  R IHATG   SS R+ Y++LGV   A+++EIKK+FH LAK++HPD N+NNPSAKRKF
Sbjct: 31  LFERYIHATGINNSSARNYYDVLGVSPKATREEIKKSFHELAKKFHPDTNRNNPSAKRKF 90

Query: 126 QEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDS 185
           QEIR+AYETL +SE+R +YD+ + R S+   Y   D       GD+E FR AYQ++FSD+
Sbjct: 91  QEIREAYETLGNSERREEYDKLQYRNSD---YVNSDG------GDSERFRRAYQSNFSDT 141

Query: 186 FHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAK 245
           FHKIFSEIFE+  +   PDI+VEL LS +EAA+GCTK +SFDA+V CDSC G G P+DA 
Sbjct: 142 FHKIFSEIFEN--NQIKPDIRVELSLSLSEAAEGCTKRLSFDAYVFCDSCDGLGHPSDAA 199

Query: 246 TKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305
             IC TCRG+GRVTIPPFT++C TCKG G IIK++CM+C+GSG+V+G K  ++ IP GV+
Sbjct: 200 MSICPTCRGVGRVTIPPFTASCQTCKGTGHIIKEYCMSCRGSGIVEGTKTAELVIPGGVE 259

Query: 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD 365
           S  TI +  AGN   R  Q GNL+IKLKVA+D  F+RDG+D+YVD+NISFTQAILGGKV 
Sbjct: 260 SEATITIVGAGNVSSRTSQPGNLYIKLKVANDSTFTRDGSDIYVDANISFTQAILGGKVV 319

Query: 366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
           VPTLSGK+Q+ IPKG QP QLLVLRGKGL K G F+DHGDQYVRFRVNFPT
Sbjct: 320 VPTLSGKIQLDIPKGTQPDQLLVLRGKGLPKQGFFVDHGDQYVRFRVNFPT 370

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15217871|ref|NP_174142.1| chaperone protein dnaJ 1 [Arabidopsis thaliana] gi|9795616|gb|AAF98434.1|AC021044_13 Putative dnaJ protein [Arabidopsis thaliana] gi|332192811|gb|AEE30932.1| chaperone protein dnaJ 1 [Arabidopsis thaliana]

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 223/351 (63%), Positives = 274/351 (78%), Gaps = 11/351 (3%)

Query: 66  LARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKF 125
           L  R IHATG   SS R+ Y++LGV   A+++EIKK+FH LAK++HPD N+NNPSAKRKF
Sbjct: 31  LFERYIHATGINNSSARNYYDVLGVSPKATREEIKKSFHELAKKFHPDTNRNNPSAKRKF 90

Query: 126 QEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDS 185
           QEIR+AYETL +SE+R +YD+ + R S+   Y   D       GD+E FR AYQ++FSD+
Sbjct: 91  QEIREAYETLGNSERREEYDKLQYRNSD---YVNNDG------GDSERFRRAYQSNFSDT 141

Query: 186 FHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAK 245
           FHKIFSEIFE+  +   PDI+VEL LS +EAA+GCTK +SFDA+V CDSC G G P+DA 
Sbjct: 142 FHKIFSEIFEN--NQIKPDIRVELSLSLSEAAEGCTKRLSFDAYVFCDSCDGLGHPSDAA 199

Query: 246 TKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305
             IC TCRG+GRVTIPPFT++C TCKG G IIK++CM+C+GSG+V+G K  ++ IP GV+
Sbjct: 200 MSICPTCRGVGRVTIPPFTASCQTCKGTGHIIKEYCMSCRGSGIVEGTKTAELVIPGGVE 259

Query: 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD 365
           S  TI +  AGN   R  Q GNL+IKLKVA+D  F+RDG+D+YVD+NISFTQAILGGKV 
Sbjct: 260 SEATITIVGAGNVSSRTSQPGNLYIKLKVANDSTFTRDGSDIYVDANISFTQAILGGKVV 319

Query: 366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
           VPTLSGK+Q+ IPKG QP QLLVLRGKGL K G F+DHGDQYVRFRVNFPT
Sbjct: 320 VPTLSGKIQLDIPKGTQPDQLLVLRGKGLPKQGFFVDHGDQYVRFRVNFPT 370

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297845768|ref|XP_002890765.1| hypothetical protein ARALYDRAFT_473029 [Arabidopsis lyrata subsp. lyrata] gi|297336607|gb|EFH67024.1| hypothetical protein ARALYDRAFT_473029 [Arabidopsis lyrata subsp. lyrata]

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 222/351 (63%), Positives = 272/351 (77%), Gaps = 11/351 (3%)

Query: 66  LARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKF 125
           L  R IHATG   SS R+ Y++LGV   A+++EIKK+FH LAK++HPD N+NNPSAKRKF
Sbjct: 31  LFERYIHATGIYSSSARNYYDVLGVSPKATREEIKKSFHELAKKFHPDTNRNNPSAKRKF 90

Query: 126 QEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDS 185
           QEIR+AYETL +SE+R +YD+ R    +N  Y   D       GD E FR AYQ++FSDS
Sbjct: 91  QEIREAYETLGNSERREEYDKLRY---QNSDYVNNDG------GDGERFRRAYQSNFSDS 141

Query: 186 FHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAK 245
           FHKIFSEIFE+  +    DI+VEL LSF+EAA+GCTK +SFDA+V CDSC G G P DA 
Sbjct: 142 FHKIFSEIFEN--NQIKSDIRVELSLSFSEAAEGCTKRLSFDAYVFCDSCDGLGHPRDAA 199

Query: 246 TKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305
             +C TCRG+GRVTIPPFT++C TCKG G IIK++CM+C+GSG+V+  K V++ IP GV+
Sbjct: 200 MSVCPTCRGLGRVTIPPFTASCQTCKGTGHIIKEYCMSCRGSGIVEATKTVELAIPGGVE 259

Query: 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD 365
           S  TI +  AGN   R  Q GNL+IKLKVA+D  F+RDG+D+YVD+NISFTQAILGGKV 
Sbjct: 260 SEATITIGGAGNVRSRTSQPGNLYIKLKVANDSTFTRDGSDIYVDANISFTQAILGGKVV 319

Query: 366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
           VPTLSGK+Q+ IP+G QPGQLLVLRGKGL K G F+DHGDQYVRFR+NFPT
Sbjct: 320 VPTLSGKIQLDIPEGTQPGQLLVLRGKGLPKQGFFVDHGDQYVRFRINFPT 370

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	416
TAIR|locus:2032175	427	ATJ1 [Arabidopsis thaliana (ta	0.817	0.796	0.635	1.4e-117
TAIR|locus:2162692	456	GFA2 "gametophytic factor 2" [	0.817	0.745	0.427	1e-68
TIGR_CMR|GSU_0034	373	GSU_0034 "chaperone protein dn	0.783	0.873	0.404	7.1e-61
DICTYBASE|DDB_G0278789	460	DDB_G0278789 "heat shock prote	0.812	0.734	0.375	1.5e-60
UNIPROTKB|O34242	381	dnaJ "Chaperone protein DnaJ"	0.778	0.850	0.393	8.4e-58
TIGR_CMR|VC_0856	381	VC_0856 "dnaJ protein" [Vibrio	0.778	0.850	0.393	8.4e-58
TIGR_CMR|BA_4538	371	BA_4538 "chaperone protein dna	0.788	0.884	0.397	1.7e-57
UNIPROTKB|P08622	376	dnaJ [Escherichia coli K-12 (t	0.771	0.853	0.383	3.6e-57
TIGR_CMR|SO_1127	378	SO_1127 "chaperone protein Dna	0.723	0.796	0.404	4.6e-57
TIGR_CMR|SPO_0044	381	SPO_0044 "chaperone protein Dn	0.783	0.855	0.383	1.1e-55

TAIR|locus:2032175 ATJ1 [Arabidopsis thaliana (taxid:3702)]

 Score = 1158 (412.7 bits), Expect = 1.4e-117, P = 1.4e-117
 Identities = 223/351 (63%), Positives = 274/351 (78%)

Query:    66 LARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKF 125
             L  R IHATG   SS R+ Y++LGV   A+++EIKK+FH LAK++HPD N+NNPSAKRKF
Sbjct:    31 LFERYIHATGINNSSARNYYDVLGVSPKATREEIKKSFHELAKKFHPDTNRNNPSAKRKF 90

Query:   126 QEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDS 185
             QEIR+AYETL +SE+R +YD+ + R S+   Y   D       GD+E FR AYQ++FSD+
Sbjct:    91 QEIREAYETLGNSERREEYDKLQYRNSD---YVNNDG------GDSERFRRAYQSNFSDT 141

Query:   186 FHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAK 245
             FHKIFSEIFE+  +   PDI+VEL LS +EAA+GCTK +SFDA+V CDSC G G P+DA 
Sbjct:   142 FHKIFSEIFEN--NQIKPDIRVELSLSLSEAAEGCTKRLSFDAYVFCDSCDGLGHPSDAA 199

Query:   246 TKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305
               IC TCRG+GRVTIPPFT++C TCKG G IIK++CM+C+GSG+V+G K  ++ IP GV+
Sbjct:   200 MSICPTCRGVGRVTIPPFTASCQTCKGTGHIIKEYCMSCRGSGIVEGTKTAELVIPGGVE 259

Query:   306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD 365
             S  TI +  AGN   R  Q GNL+IKLKVA+D  F+RDG+D+YVD+NISFTQAILGGKV 
Sbjct:   260 SEATITIVGAGNVSSRTSQPGNLYIKLKVANDSTFTRDGSDIYVDANISFTQAILGGKVV 319

Query:   366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
             VPTLSGK+Q+ IPKG QP QLLVLRGKGL K G F+DHGDQYVRFRVNFPT
Sbjct:   320 VPTLSGKIQLDIPKGTQPDQLLVLRGKGLPKQGFFVDHGDQYVRFRVNFPT 370

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM;ISS

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2162692 GFA2 "gametophytic factor 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
 Identities = 154/360 (42%), Positives = 211/360 (58%)

Query:    65 FLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRK 124
             F + R  H TGS + S +D Y +LGV +NA + EIKKA++ LAK+ HPD NK++P A+ K
Sbjct:    76 FGSTRSFHGTGSSFMSAKDYYSVLGVSKNAQEGEIKKAYYGLAKKLHPDMNKDDPEAETK 135

Query:   125 FQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG--DAEGFRYAGDAEGFRYAYQTHF 182
             FQE+  AYE L+D EKR  YD+      E +  S G  + +GF   G   GF       F
Sbjct:   136 FQEVSKAYEILKDKEKRDLYDQVGHEAFE-QNASGGFPNDQGFG-GGGGGGFN-----PF 188

Query:   183 SDSFHKIFSEIFEDETSHFA-PDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFP 241
              D F     +IF          D++V L LSF EA +GC+K V+F   + C++C G+G P
Sbjct:   189 -DIFGSFNGDIFNMYRQDIGGQDVKVLLDLSFMEAVQGCSKTVTFQTEMACNTCGGQGVP 247

Query:   242 ADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVK 297
                K + C  C G G  ++        +TC  C G G+     C +C+G+ VV G K VK
Sbjct:   248 PGTKREKCKACNGSGMTSLRRGMLSIQTTCQKCGGAGQTFSSICKSCRGARVVRGQKSVK 307

Query:   298 VTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQ 357
             VTI  GVD+ DT++V   G A   G Q G+L++ LKV +DP+F R+G+D++VD+ +S TQ
Sbjct:   308 VTIDPGVDNSDTLKVARVGGADPEGDQPGDLYVTLKVREDPVFRREGSDIHVDAVLSVTQ 367

Query:   358 AILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLA--KNGLFLDHGDQYVRFRVNFP 415
             AILGG + VPTL+G V VK+  G QPG  +VLR KG+   K+  F   GDQYV F V+ P
Sbjct:   368 AILGGTIQVPTLTGDVVVKVRPGTQPGHKVVLRNKGIRARKSTKF---GDQYVHFNVSIP 424

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0000740 "nuclear membrane fusion" evidence=IMP

GO:0010198 "synergid death" evidence=IMP

GO:0051085 "chaperone mediated protein folding requiring cofactor" evidence=IGI

GO:0000741 "karyogamy" evidence=RCA

GO:0009560 "embryo sac egg cell differentiation" evidence=RCA

GO:0009553 "embryo sac development" evidence=IMP

GO:0009558 "embryo sac cellularization" evidence=IMP

GO:0010197 "polar nucleus fusion" evidence=IMP

TIGR_CMR|GSU_0034 GSU_0034 "chaperone protein dnaJ" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
 Identities = 140/346 (40%), Positives = 197/346 (56%)

Query:    79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138
             + KRD YE+LGV +NAS  EIKKAF  LA QYHPD N ++  A+ KF+EI +AYE L D 
Sbjct:     3 ADKRDYYEVLGVHKNASDTEIKKAFRKLAIQYHPDKNPDDKEAEEKFKEITEAYEVLSDP 62

Query:   139 EKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIF---- 194
             +KRAQYD+    G     +S G   GF  AG          T F D F  IF +IF    
Sbjct:    63 QKRAQYDQFGHAGVGAGGFSGGGFGGFG-AG----------TPFGDIFGDIFGDIFGGRP 111

Query:   195 EDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRG 254
                      D+Q  + LSF EAA G  K +       C  C G G     + K+C TCRG
Sbjct:   112 RGSRGRRGDDLQYNMELSFEEAAFGAEKEIQVPYGKRCGDCGGSGAKPGTEPKVCPTCRG 171

Query:   255 IGRVTIPP-FTS---TCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTI 310
              G+V     F S   TC+ C G GR++++ C +C+GSG++   K + V +PAGV++G  +
Sbjct:   172 AGQVRFQQGFFSVSKTCNHCNGEGRVVENPCTSCRGSGMIRDTKTLSVKVPAGVETGTRL 231

Query:   311 RVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLS 370
             ++   G  G +G  +G+L++ + V + PIF+R+  DV  +  +SF QA LG +++VPTL 
Sbjct:   232 KLSGEGGQGIKGGGNGDLYVAIAVREHPIFTREDNDVLCEIPVSFVQAALGCEIEVPTLD 291

Query:   371 GKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
             GKV +KIP+G Q G++  LRGKG+ +   +   GDQ V  +V  P+
Sbjct:   292 GKVSMKIPEGTQSGRIFRLRGKGVPQLQGY-GRGDQLVIIKVETPS 336

GO:0009408 "response to heat" evidence=ISS

DICTYBASE|DDB_G0278789 DDB_G0278789 "heat shock protein DnaJ family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
 Identities = 135/360 (37%), Positives = 199/360 (55%)

Query:    68 RRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQE 127
             +R   +T    S KRD YE+LGV  +AS+ +IKKAF+ LAK+YHPD N+++P+A + F E
Sbjct:    59 KRYFRSTSPILSEKRDLYEVLGVSRDASKQDIKKAFYALAKKYHPDTNRDDPNAHKTFAE 118

Query:   128 IRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFH 187
             I +AY+ L D +KR+ YD    +G+  E    G   GF   G   G     +  F   F 
Sbjct:   119 ISNAYDVLYDDKKRSVYDTAGHQGATQENMEHG---GF--PGGMGGQNVNLEDLFGGGFD 173

Query:   188 KIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGF 240
                +++F         + S    D++V L L F EA  G  K +SF     C  C G G 
Sbjct:   174 --LNDLFGGGGGGGGGKKSSVGADMEVNLHLDFMEAVNGAEKDISFYGGTKCTPCDGSGA 231

Query:   241 PADAKTKICSTCRGIGRVTIPP----FTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEV 296
                 K + C  C G G  T         + C  CKG G++IK+ C +CKG G+  G + V
Sbjct:   232 KPGTKPQTCKQCGGTGSQTRSNGFFHMATNCRACKGTGKVIKEPCSSCKGKGITQGERTV 291

Query:   297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFT 356
              + +PAG+++G TI++   G     GR+ GNLF+ + V++  +F R G D+++D  I+ +
Sbjct:   292 NIKVPAGINNGTTIKLAGEGEPSKTGRR-GNLFVHITVSEHELFRRQGNDIHLDVPITIS 350

Query:   357 QAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLA-KNGLFLDHGDQYVRFRVNFP 415
             QAILG  V +PTLSG+V++K+PKG QP +  VL+GKG+   N    + G Q+V F V+ P
Sbjct:   351 QAILGDTVSIPTLSGEVELKVPKGTQPNEKRVLKGKGVRFVNST--EFGSQFVHFIVSIP 408

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0046872 "metal ion binding" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

UNIPROTKB|O34242 dnaJ "Chaperone protein DnaJ" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
 Identities = 136/346 (39%), Positives = 187/346 (54%)

Query:    80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
             SKRD YE+LGV  +AS+ +IKKA+  LA +YHPD N  +  A  KF+E+++AYE L D++
Sbjct:     2 SKRDFYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDAQ 61

Query:   140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETS 199
             K+A YD+      E     AG   GF   G   G        F D F  +F +IF     
Sbjct:    62 KKAAYDQYGHAAFEQ---GAG---GFGGGGFGGG-----GADFGDIFGDVFGDIFGGGRR 110

Query:   200 HFAP------DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCR 253
                P      D++  + LS  EA +GC+K +     V CD+C G G       + C TC 
Sbjct:   111 GGGPRAQRGSDLRYNMELSLEEAVRGCSKEIEVPTLVHCDACDGSGAKKGTSAQTCGTCH 170

Query:   254 GIGRVTIPP--FT--STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309
             G G+V +    F    TC TC G G+IIKD C  C G G     K + V IPAGVD+GD 
Sbjct:   171 GHGQVQMRQGFFAVQQTCPTCHGKGKIIKDPCNVCHGQGRKQKTKTLNVKIPAGVDTGDR 230

Query:   310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTL 369
             IR+   G AG  G   G+L++++ V +  IF RDG ++Y +  +SF  A LGG+V+VPTL
Sbjct:   231 IRLSGEGEAGEMGAPAGDLYVQVHVKEHHIFERDGNNLYCEVPVSFAMAALGGEVEVPTL 290

Query:   370 SGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP 415
              G+V +K+P   Q G++  +RGKG+ K       GD  V+  V  P
Sbjct:   291 DGRVSLKVPAETQTGRMFRMRGKGV-KGVRSAALGDLIVKLVVETP 335

GO:0006457 "protein folding" evidence=ISS

TIGR_CMR|VC_0856 VC_0856 "dnaJ protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
 Identities = 136/346 (39%), Positives = 187/346 (54%)

Query:    80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
             SKRD YE+LGV  +AS+ +IKKA+  LA +YHPD N  +  A  KF+E+++AYE L D++
Sbjct:     2 SKRDFYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDAQ 61

Query:   140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETS 199
             K+A YD+      E     AG   GF   G   G        F D F  +F +IF     
Sbjct:    62 KKAAYDQYGHAAFEQ---GAG---GFGGGGFGGG-----GADFGDIFGDVFGDIFGGGRR 110

Query:   200 HFAP------DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCR 253
                P      D++  + LS  EA +GC+K +     V CD+C G G       + C TC 
Sbjct:   111 GGGPRAQRGSDLRYNMELSLEEAVRGCSKEIEVPTLVHCDACDGSGAKKGTSAQTCGTCH 170

Query:   254 GIGRVTIPP--FT--STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309
             G G+V +    F    TC TC G G+IIKD C  C G G     K + V IPAGVD+GD 
Sbjct:   171 GHGQVQMRQGFFAVQQTCPTCHGKGKIIKDPCNVCHGQGRKQKTKTLNVKIPAGVDTGDR 230

Query:   310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTL 369
             IR+   G AG  G   G+L++++ V +  IF RDG ++Y +  +SF  A LGG+V+VPTL
Sbjct:   231 IRLSGEGEAGEMGAPAGDLYVQVHVKEHHIFERDGNNLYCEVPVSFAMAALGGEVEVPTL 290

Query:   370 SGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP 415
              G+V +K+P   Q G++  +RGKG+ K       GD  V+  V  P
Sbjct:   291 DGRVSLKVPAETQTGRMFRMRGKGV-KGVRSAALGDLIVKLVVETP 335

GO:0006457 "protein folding" evidence=ISS

TIGR_CMR|BA_4538 BA_4538 "chaperone protein dnaJ" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
 Identities = 137/345 (39%), Positives = 189/345 (54%)

Query:    80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
             SKRD YE+LG+ + AS+DEIKKA+  LAK+YHPD +K   +A  KF+E+++AYE L D +
Sbjct:     2 SKRDYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEE-NAIEKFKEVQEAYEVLSDDQ 60

Query:   140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETS 199
             KRAQYD+    G+ N+ +      GF   GD  G  + ++  FS  F        +    
Sbjct:    61 KRAQYDQFGHAGA-NQGFG-----GFGGGGDFGG-GFGFEDIFSSFFGGGGGRRRDPNAP 113

Query:   200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVT 259
                 D+Q ++ L F EA  G   +V      PCD+C G G       + C  C G G+V+
Sbjct:   114 RQGADLQYQVTLEFEEAIFGKELNVEIPVEDPCDTCKGSGAKPGTSKETCKHCSGSGQVS 173

Query:   260 IP---PF-----TSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR 311
             +    PF        CS C G G++IK+ C TC GSG V   K++ V IPAG+D+G  IR
Sbjct:   174 VEQNTPFGRIVNRQACSHCSGTGQMIKEKCTTCHGSGKVRKRKKINVKIPAGIDNGQQIR 233

Query:   312 VPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG 371
             V   G AG  G   G+L++ + V     F R+G  +  +  ++F Q  LG +V+VPT+ G
Sbjct:   234 VSGKGEAGVNGGPAGDLYVVVHVRSHEFFEREGDHIICEMPLTFAQMALGAEVEVPTVHG 293

Query:   372 KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
             KV++KIP G Q G    L+GKG A N      GDQYV  RV  PT
Sbjct:   294 KVKLKIPAGTQTGTEFRLKGKG-APNVRGYGQGDQYVVVRVVVPT 337

GO:0009408 "response to heat" evidence=ISS

UNIPROTKB|P08622 dnaJ [Escherichia coli K-12 (taxid:83333)]

 Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
 Identities = 132/344 (38%), Positives = 194/344 (56%)

Query:    80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
             +K+D YE+LGV + A + EI+KA+  LA +YHPD N+ +  A+ KF+EI++AYE L DS+
Sbjct:     2 AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 61

Query:   140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--- 196
             KRA YD+    G  +  +  G   G  + G A+         FSD F  +F +IF     
Sbjct:    62 KRAAYDQY---G--HAAFEQGGMGGGGFGGGAD---------FSDIFGDVFGDIFGGGRG 107

Query:   197 -ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGI 255
              + +    D++  + L+  EA +G TK +       CD CHG G     + + C TC G 
Sbjct:   108 RQRAARGADLRYNMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGS 167

Query:   256 GRVTIPP--FT--STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR 311
             G+V +    F    TC  C+G G +IKD C  C G G V+  K + V IPAGVD+GD IR
Sbjct:   168 GQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPAGVDTGDRIR 227

Query:   312 VPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG 371
             +   G AG  G   G+L+++++V   PIF R+G ++Y +  I+F  A LGG+++VPTL G
Sbjct:   228 LAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDG 287

Query:   372 KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP 415
             +V++K+P   Q G+L  +RGKG+ K+      GD   R  V  P
Sbjct:   288 RVKLKVPGETQTGKLFRMRGKGV-KSVRGGAQGDLLCRVVVETP 330

GO:0003756 "protein disulfide isomerase activity" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IDA;IMP

GO:0006457 "protein folding" evidence=IDA

GO:0042026 "protein refolding" evidence=IDA

GO:0051082 "unfolded protein binding" evidence=IEA;IDA

GO:0016020 "membrane" evidence=IDA

GO:0005737 "cytoplasm" evidence=IEA;IDA

GO:0006260 "DNA replication" evidence=IEA;IMP

GO:0009408 "response to heat" evidence=IEA;IEP

GO:0046872 "metal ion binding" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0043335 "protein unfolding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

TIGR_CMR|SO_1127 SO_1127 "chaperone protein DnaJ" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
 Identities = 132/326 (40%), Positives = 183/326 (56%)

Query:    80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
             SKRD YE+LGV  +AS+ EIKKA+  LA ++HPD N  + +A+  F+E+++AYE L D+ 
Sbjct:     2 SKRDYYEVLGVGRDASEREIKKAYKRLAMKFHPDRNPGDKAAEASFKEVKEAYEILTDAN 61

Query:   140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFE---- 195
             K+A YD+    G +  +   G   G+  AGD           F D F  +F +IF     
Sbjct:    62 KKAAYDQFGHAGVDPNRGGGG---GYGGAGD-----------FGDIFGDVFGDIFGGGRR 107

Query:   196 ---DETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTC 252
                   +    D++  L LS  EA KG TK +       CD C G G         C+TC
Sbjct:   108 GGGQRQAARGSDLRYNLELSLEEAVKGLTKELRIPTLASCDVCDGSGAKKGTSATTCTTC 167

Query:   253 RGIGRVTIPP--FT--STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD 308
              G G+V +    FT    C TC G G+IIKD C  C G G V+  K + V IPAGVD+GD
Sbjct:   168 HGQGQVQMRQGFFTVQQPCPTCHGRGKIIKDPCAKCHGDGRVEKTKTLSVKIPAGVDTGD 227

Query:   309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPT 368
              IR+   G AG  G   G+L++++ V +  IF RDG ++Y +  ISF++A LGG+++VPT
Sbjct:   228 RIRLAGEGEAGEFGAPAGDLYVQVSVREHAIFVRDGNNLYCEVPISFSKAALGGEIEVPT 287

Query:   369 LSGKVQVKIPKGVQPGQLLVLRGKGL 394
             L GKV +KIP   Q G++  LRGKG+
Sbjct:   288 LDGKVSLKIPAETQTGRMFRLRGKGV 313

GO:0009408 "response to heat" evidence=ISS

TIGR_CMR|SPO_0044 SPO_0044 "chaperone protein DnaJ" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
 Identities = 134/349 (38%), Positives = 196/349 (56%)

Query:    80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
             SKRD Y++LGV + AS DEIKKA+   AK+ HPD NK+NP A+  F+E+ +AYE L+D+E
Sbjct:     2 SKRDYYDVLGVSKGASADEIKKAYRGKAKELHPDRNKDNPDAESLFKEVNEAYEVLKDAE 61

Query:   140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYA-YQTHFSDSFHKIFSEIFEDET 198
             K+A YDR    G  +  +  G   G R  G   GF    + + FSD F  +F +    + 
Sbjct:    62 KKAAYDRF---G--HAAFEGGMGGGQRPGG---GFGSGDFSSAFSDVFEDLFGDFMGGQR 113

Query:   199 ------SHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTC 252
                   +    D++  L ++  EA  G  K ++    V C SC G G     +   C TC
Sbjct:   114 GGGGRRAARGSDLRYNLRVTLEEAFSGLQKTINVPTAVACSSCEGTGAEGGVEPTTCPTC 173

Query:   253 RGIGRVTIPP--FT--STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD 308
              G+G+V      FT   TC TC GLG+IIK+ C +C+G G V+  + + V IPAGV++G 
Sbjct:   174 SGMGKVRAQQGFFTVERTCPTCSGLGQIIKNPCKSCRGQGRVEKDRALSVNIPAGVETGT 233

Query:   309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPT 368
              IR+   G AG RG   G+L+I ++VA   +F RDG ++Y    +S  +A LGG ++VPT
Sbjct:   234 RIRLAGEGEAGMRGGPPGDLYIFVEVAKHELFERDGVNLYCRVPVSMAKAALGGAIEVPT 293

Query:   369 LSG-KVQVKIPKGVQPGQLLVLRGKGL-AKNGLFLDHGDQYVRFRVNFP 415
             + G + +V++P G Q G+ + LR KG+ A  G  +  GD ++   V  P
Sbjct:   294 IDGGRGRVQVPAGSQSGRQMRLRSKGMPALRGGGI--GDMFIELAVETP 340

GO:0009408 "response to heat" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q38813	DNAJ1_ARATH	No assigned EC number	0.6353	0.8173	0.8333	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00015152001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (411 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00033682001	SubName- Full=Chromosome chr8 scaffold_68, whole genome shotgun sequence;; Essential component [...] (313 aa)	•		•						0.591
	GSVIVG00015306001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence;; Essential component [...] (298 aa)	•		•						0.579
	GSVIVG00005738001	SubName- Full=Chromosome chr3 scaffold_157, whole genome shotgun sequence; (626 aa)	•		•						0.509
	GSVIVG00012517001	SubName- Full=Chromosome undetermined scaffold_388, whole genome shotgun sequence; Flags- Fragm [...] (372 aa)			•						0.492
	GSVIVG00004141001	SubName- Full=Chromosome undetermined scaffold_611, whole genome shotgun sequence; (468 aa)			•						0.492
	GSVIVG00017724001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (538 aa)			•						0.489
	GSVIVG00017185001	SubName- Full=Chromosome chr11 scaffold_14, whole genome shotgun sequence; (482 aa)			•						0.489
	GSVIVG00022013001	SubName- Full=Chromosome chr18 scaffold_24, whole genome shotgun sequence; (667 aa)	•		•						0.488
	GSVIVG00001482001	SubName- Full=Chromosome chr3 scaffold_117, whole genome shotgun sequence; (103 aa)			•						0.487
	GSVIVG00018506001	SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (649 aa)			•						0.486

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	416
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	1e-113
COG0484	371	COG0484, DnaJ, DnaJ-class molecular chaperone with	1e-113
PRK10767	371	PRK10767, PRK10767, chaperone protein DnaJ; Provis	1e-107
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	2e-91
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	9e-89
PRK14276	380	PRK14276, PRK14276, chaperone protein DnaJ; Provis	1e-84
PRK14301	373	PRK14301, PRK14301, chaperone protein DnaJ; Provis	2e-84
PRK14293	374	PRK14293, PRK14293, chaperone protein DnaJ; Provis	2e-83
PRK14291	382	PRK14291, PRK14291, chaperone protein DnaJ; Provis	3e-82
PRK14297	380	PRK14297, PRK14297, chaperone protein DnaJ; Provis	2e-81
PRK14298	377	PRK14298, PRK14298, chaperone protein DnaJ; Provis	4e-73
PRK14294	366	PRK14294, PRK14294, chaperone protein DnaJ; Provis	4e-73
PRK14282	369	PRK14282, PRK14282, chaperone protein DnaJ; Provis	1e-71
PRK14279	392	PRK14279, PRK14279, chaperone protein DnaJ; Provis	2e-71
PRK14295	389	PRK14295, PRK14295, chaperone protein DnaJ; Provis	7e-71
PRK14281	397	PRK14281, PRK14281, chaperone protein DnaJ; Provis	9e-71
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	2e-70
PRK14283	378	PRK14283, PRK14283, chaperone protein DnaJ; Provis	4e-69
PRK14287	371	PRK14287, PRK14287, chaperone protein DnaJ; Provis	7e-68
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	1e-63
PRK14300	372	PRK14300, PRK14300, chaperone protein DnaJ; Provis	2e-63
PRK14296	372	PRK14296, PRK14296, chaperone protein DnaJ; Provis	3e-62
PRK14286	372	PRK14286, PRK14286, chaperone protein DnaJ; Provis	7e-62
PRK14278	378	PRK14278, PRK14278, chaperone protein DnaJ; Provis	2e-60
PRK14290	365	PRK14290, PRK14290, chaperone protein DnaJ; Provis	3e-60
PRK14292	371	PRK14292, PRK14292, chaperone protein DnaJ; Provis	2e-59
PRK14285	365	PRK14285, PRK14285, chaperone protein DnaJ; Provis	7e-59
cd10747	158	cd10747, DnaJ_C, C-terminal substrate binding doma	2e-50
PRK14288	369	PRK14288, PRK14288, chaperone protein DnaJ; Provis	2e-49
PTZ00037	421	PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov	8e-39
PRK10266	306	PRK10266, PRK10266, curved DNA-binding protein Cbp	8e-35
pfam00226	63	pfam00226, DnaJ, DnaJ domain	8e-30
cd06257	55	cd06257, DnaJ, DnaJ domain or J-domain	1e-23
PRK14299	291	PRK14299, PRK14299, chaperone protein DnaJ; Provis	2e-23
smart00271	60	smart00271, DnaJ, DnaJ molecular chaperone homolog	3e-23
pfam01556	81	pfam01556, DnaJ_C, DnaJ C terminal domain	8e-23
PRK14299	291	PRK14299, PRK14299, chaperone protein DnaJ; Provis	8e-21
COG2214	237	COG2214, CbpA, DnaJ-class molecular chaperone [Pos	6e-19
TIGR03835	871	TIGR03835, termin_org_DnaJ, terminal organelle ass	3e-18
cd10719	65	cd10719, DnaJ_zf, Zinc finger domain of DnaJ and H	4e-17
pfam00684	65	pfam00684, DnaJ_CXXCXGXG, DnaJ central domain	4e-13
PRK09430	267	PRK09430, djlA, Dna-J like membrane chaperone prot	7e-09
COG5407	610	COG5407, SEC63, Preprotein translocase subunit Sec	2e-08
COG1076	174	COG1076, DjlA, DnaJ-domain-containing proteins 1 [	7e-07
cd10747	158	cd10747, DnaJ_C, C-terminal substrate binding doma	2e-06
PTZ00341	1136	PTZ00341, PTZ00341, Ring-infected erythrocyte surf	2e-06
TIGR00714	155	TIGR00714, hscB, Fe-S protein assembly co-chaperon	5e-06
PRK01356	166	PRK01356, hscB, co-chaperone HscB; Provisional	7e-06
pfam01556	81	pfam01556, DnaJ_C, DnaJ C terminal domain	2e-05
PRK03578	176	PRK03578, hscB, co-chaperone HscB; Provisional	5e-05
COG5269	379	COG5269, ZUO1, Ribosome-associated chaperone zuoti	6e-04
PRK05014	171	PRK05014, hscB, co-chaperone HscB; Provisional	7e-04
TIGR03835	871	TIGR03835, termin_org_DnaJ, terminal organelle ass	0.001
COG1076	174	COG1076, DjlA, DnaJ-domain-containing proteins 1 [	0.002
PLN03165	111	PLN03165, PLN03165, chaperone protein dnaJ-related	0.003

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score =  336 bits (864), Expect = e-113
 Identities = 146/354 (41%), Positives = 191/354 (53%), Gaps = 37/354 (10%)

Query: 83  DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRA 142
           D YE+LGV ++AS++EIKKA+  LAK+YHPD NK+   A+ KF+EI +AYE L D EKRA
Sbjct: 1   DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD-KEAEEKFKEINEAYEVLSDPEKRA 59

Query: 143 QYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED------ 196
           QYD+    G            G    G   GF       F   F  IF + F        
Sbjct: 60  QYDQFGHAGFNGG--------GGGGGGGFNGF----DIGFFGDFGDIFGDFFGGGGGSGR 107

Query: 197 ---ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCR 253
                     D++ +L L+F EA  G  K +       C++CHG G       K C TC 
Sbjct: 108 RRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCG 167

Query: 254 GIGRVTI---PPF-----TSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305
           G G+V      PF       TC TC G G+IIK+ C TCKG G V   K + V IPAGVD
Sbjct: 168 GTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVD 227

Query: 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD 365
           +G  +RV   GNAG  G  +G+L++ ++V    IF RDG D+Y++  ISFTQAILGG+++
Sbjct: 228 TGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIE 287

Query: 366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAK---NGLFLDHGDQYVRFRVNFPT 416
           VPTL G V++KIP G Q G +  L+GKG+ +   NG     GD  V  +V  P 
Sbjct: 288 VPTLDGDVKLKIPAGTQSGTVFRLKGKGVPRLRGNG----RGDLLVTVKVETPK 337

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

 Score =  335 bits (861), Expect = e-113
 Identities = 146/354 (41%), Positives = 187/354 (52%), Gaps = 38/354 (10%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +KRD YE+LGV ++AS++EIKKA+  LAK+YHPD N  +  A+ KF+EI +AYE L D E
Sbjct: 2   AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPE 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETS 199
           KRA YD+    G    K       GF                F   F  IF + F     
Sbjct: 62  KRAAYDQF---GHAGFKAGGFGGFGF--------------GGFGGDFGDIFEDFFGGGGG 104

Query: 200 HFAP--------DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICST 251
                       D++  L ++  EA  G  K +     V C +CHG G       K C T
Sbjct: 105 GRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTDPKTCPT 164

Query: 252 CRGIGRVTI---PPFTS---TCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305
           C G G+V       F S   TC TC G G+IIKD C  CKG G V   K + V IPAGVD
Sbjct: 165 CNGSGQVRTVQRTGFFSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGVD 224

Query: 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD 365
            GD IR+   G AG  G   G+L++ + V   PIF RDG D+Y +  ISFT+A LGG+++
Sbjct: 225 DGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIE 284

Query: 366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAK---NGLFLDHGDQYVRFRVNFPT 416
           VPTL G+V++KIP G Q G++  LRGKG+ K    G     GD YVR +V  P 
Sbjct: 285 VPTLDGRVKLKIPAGTQTGEVFRLRGKGMPKLRSGG----RGDLYVRVKVETPK 334

Length = 371

>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional

 Score =  319 bits (821), Expect = e-107
 Identities = 150/349 (42%), Positives = 198/349 (56%), Gaps = 30/349 (8%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +KRD YE+LGV  NAS+DEIKKA+  LA +YHPD N  +  A+ KF+EI++AYE L D +
Sbjct: 2   AKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQ 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETS 199
           KRA YD+          Y  G A  F   G   GF       F D F  IF +IF     
Sbjct: 62  KRAAYDQ----------Y--GHA-AFEQGGGGGGF--GGGGGFGDIFGDIFGDIFGGGRG 106

Query: 200 HFAP------DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCR 253
                     D++  + ++  EA +G TK +     V CD+CHG G       K C TC 
Sbjct: 107 GGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCH 166

Query: 254 GIGRVTIPP--FT--STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309
           G G+V +    FT   TC TC G G+IIKD C  C G G V+  K + V IPAGVD+GD 
Sbjct: 167 GAGQVRMQQGFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDR 226

Query: 310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTL 369
           IR+   G AG RG   G+L++++ V + PIF RDG D+Y +  ISFT A LGG+++VPTL
Sbjct: 227 IRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTL 286

Query: 370 SGKVQVKIPKGVQPGQLLVLRGKGLA--KNGLFLDHGDQYVRFRVNFPT 416
            G+V++KIP+G Q G+L  LRGKG+   ++G     GD Y +  V  P 
Sbjct: 287 DGRVKLKIPEGTQTGKLFRLRGKGVKSVRSG---ARGDLYCQVVVETPV 332

Length = 371

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score =  280 bits (719), Expect = 2e-91
 Identities = 139/352 (39%), Positives = 190/352 (53%), Gaps = 24/352 (6%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEK 140
           K+D YE+LGV  NA+++EIKKA+  LAK+YHPD N  +  A++KF+EI +AYE L D +K
Sbjct: 4   KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQK 63

Query: 141 RAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETS- 199
           RAQYD+      +   +  G   GF   G   G        F D F  IF + F      
Sbjct: 64  RAQYDQFGHAAFDPGGFGQG---GFGQGGFGGGGFDFDFGGFGDIFEDIFGDFFGTGRRR 120

Query: 200 -HFAP----DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRG 254
               P    DI+ +L L+F EAA G  K +  + F  CD C G G    +K   C  C G
Sbjct: 121 AETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHG 180

Query: 255 IGRVTI---PPF-----TSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDS 306
            G+V      PF       TC  C G G+II D C  C G+G +   +++KV IPAG+D 
Sbjct: 181 TGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGIDD 240

Query: 307 GDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDV 366
           G  I +   G  G +G  +G+L+I +KV   P+F R+G +VY++  I+FT A LGG++++
Sbjct: 241 GQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEI 300

Query: 367 PTLSGKVQVKIPKGVQPGQLLVLRGKG---LAKNGLFLDHGDQYVRFRVNFP 415
           PTL GKV+  IP+G Q G    LRGKG   L   G     GDQ V+  +  P
Sbjct: 301 PTLDGKVKFTIPEGTQTGTKFRLRGKGIPHLRGRG----RGDQIVKVYIEVP 348

Length = 386

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score =  273 bits (700), Expect = 9e-89
 Identities = 143/352 (40%), Positives = 186/352 (52%), Gaps = 31/352 (8%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +KRD YE+LGV ++AS+DEIKKA+  L+K+YHPD NK    A  KF+EI +AYE L D +
Sbjct: 2   AKRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE-EGADEKFKEISEAYEVLSDDQ 60

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETS 199
           KRAQYD+    G  N+ +  G   G  + G   GF           F  IFS  F     
Sbjct: 61  KRAQYDQFGHAGP-NQGFGGGGFGGGDFGG---GF----------GFEDIFSSFFGGGGR 106

Query: 200 HFAP-------DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTC 252
              P       D+Q  + L+F EA  G  K +       CD+CHG G       + CS C
Sbjct: 107 RRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHC 166

Query: 253 RGIGRVTIPPFT--------STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV 304
            G G+V++   T         TC  C G G+ IK+ C TC G G V   K++ V IPAGV
Sbjct: 167 GGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGV 226

Query: 305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKV 364
           D+G  IRV   G  G  G   G+L++  +V     F RDG D+Y +  ++F QA LG ++
Sbjct: 227 DNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEI 286

Query: 365 DVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
           +VPTL GKV++KIP G Q G    L+GKG   N      GDQYV  RV  PT
Sbjct: 287 EVPTLHGKVKLKIPAGTQTGTQFRLKGKG-VPNVRGYGQGDQYVVVRVVTPT 337

Length = 376

>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional

 Score =  263 bits (673), Expect = 1e-84
 Identities = 136/354 (38%), Positives = 185/354 (52%), Gaps = 34/354 (9%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEK 140
             + Y+ LGV ++ASQDEIKKA+  L+K+YHPD NK  P A+ K++E+++AYETL D +K
Sbjct: 3   NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE-PGAEEKYKEVQEAYETLSDPQK 61

Query: 141 RAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSH 200
           RA YD+  + G+ N  +  G A GF     + GF           F  IFS  F    + 
Sbjct: 62  RAAYDQYGAAGA-NGGF-GGGAGGFGGFDGSGGF---------GGFEDIFSSFFGGGGAR 110

Query: 201 FAP-------DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCR 253
             P       D+Q  + L F EA  G  K VS++    C +C+G G         C  C 
Sbjct: 111 RNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCH 170

Query: 254 GIGRVTIPPFT--------STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305
           G G +T+   T         TC  C G G+ IK+ C TC G+G       V V IPAGV+
Sbjct: 171 GSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVE 230

Query: 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD 365
           +G  IR+   G AG  G  +G+L++  +V     F RDG+ +Y    ISF QA LG  V+
Sbjct: 231 TGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVE 290

Query: 366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAK---NGLFLDHGDQYVRFRVNFPT 416
           VPT+ G V++KIP G Q G+   LRGKG  K    G    +GDQ+V   +  PT
Sbjct: 291 VPTVHGDVELKIPAGTQTGKKFRLRGKGAPKLRGGG----NGDQHVTVNIVTPT 340

Length = 380

>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional

 Score =  262 bits (671), Expect = 2e-84
 Identities = 146/347 (42%), Positives = 185/347 (53%), Gaps = 24/347 (6%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           S+RD YE+LGV  +AS+DEIKKA+  LA QYHPD N +NP A++KF+E  +AYE LRD+E
Sbjct: 2   SQRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAE 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETS 199
           KRA+YDR    G        G   GF  A D          HFSD F  +F   F    S
Sbjct: 62  KRARYDRFGHAGVNGN----GGFGGFSSAEDIFS-------HFSDIFGDLFG--FSGGGS 108

Query: 200 HFAP------DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCR 253
              P      D++  L +SF +AAKG    +     V CD C G G       + C  C 
Sbjct: 109 RRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCG 168

Query: 254 GIGRVTIPP----FTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309
           G G+V            C  C+G GR+I   C  CKGSG+V   +E+KV IPAGVD+G  
Sbjct: 169 GSGQVRQSQGFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGSR 228

Query: 310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTL 369
           +R+   G  G  G   G+L++ + V DD IF R G D+ V   ISF QA LG +++VPTL
Sbjct: 229 LRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTL 288

Query: 370 SGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
              V + IPKG Q G++  LRGKGL   G     GD  V   V  PT
Sbjct: 289 DDPVTLDIPKGTQSGEVFRLRGKGLPYLG-SSQKGDLLVEVSVVTPT 334

Length = 373

>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional

 Score =  259 bits (664), Expect = 2e-83
 Identities = 133/352 (37%), Positives = 181/352 (51%), Gaps = 33/352 (9%)

Query: 82  RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR 141
            D YE+LGV  +A +DE+K+A+  LA++YHPD NK  P A+ +F+EI  AYE L D E R
Sbjct: 3   ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKE-PGAEDRFKEINRAYEVLSDPETR 61

Query: 142 AQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHF 201
           A+YD+    G          A GF   GD  GF        +D F   FS          
Sbjct: 62  ARYDQFGEAG-------VSGAAGFPDMGDMGGF--------ADIFETFFSGFGGAGGQGG 106

Query: 202 AP---------DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTC 252
                      D++ +L L F EA  G  K +       C++C G G         CSTC
Sbjct: 107 RRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTC 166

Query: 253 RGIG---RVTIPPF-----TSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV 304
            G G   R T  PF      S C TC G G++I+D C  C G GV    K++K+ IPAGV
Sbjct: 167 GGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGV 226

Query: 305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKV 364
           D+G  +RV   G+AG RG   G+L++ L V +DP F RDG ++  +  IS+ QAILG  +
Sbjct: 227 DTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTL 286

Query: 365 DVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
           +V T+ G V++ IP G QP  +L L  KG+ + G  +  GD  +  +V  PT
Sbjct: 287 EVDTVDGPVELTIPAGTQPNTVLTLENKGVPRLGNPVARGDHLITVKVKIPT 338

Length = 374

>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional

 Score =  257 bits (657), Expect = 3e-82
 Identities = 129/360 (35%), Positives = 193/360 (53%), Gaps = 39/360 (10%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +K+D YE+LGV  NA+Q+EIKKA+  LA++YHPD NKN P A+ KF+EI +AY+ L D E
Sbjct: 1   AKKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-PEAEEKFKEINEAYQVLSDPE 59

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKI-----FSEIF 194
           KR  YD+          +S    +        EGF      +  D    +     F +IF
Sbjct: 60  KRKLYDQFGHAA-----FSGSGQQQQ----GQEGFSDFGGGNIEDILEDVFDIFGFGDIF 110

Query: 195 EDETS-------HFAP----DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPAD 243
               +       +  P    DI   + +S  EA  G T  +    +VPC++C G G+   
Sbjct: 111 GRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEACGGTGYDPG 170

Query: 244 AKTKICSTCRGIGRVTIPPF----TSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVT 299
           +  K+C TC G G +         + TC TC G G ++++ C  C G G+V   + +KV 
Sbjct: 171 SGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEG-VLREPCSKCNGRGLVIKKETIKVR 229

Query: 300 IPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAI 359
           IP GVD+G  +RVP  G+AG  G   G+L+I +KV   P+F R G ++Y+D NI+  +A+
Sbjct: 230 IPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAV 289

Query: 360 LGGKVDVPTLSG-KVQVKIPKGVQPGQLLVLRGKGLAK---NGLFLDHGDQYVRFRVNFP 415
           LG +++VP L G K +VKIP G + G  + + GKG+ +   +G    +GD  VR  ++ P
Sbjct: 290 LGTELEVPLLDGKKEKVKIPPGTKEGDKIRVPGKGMPRLKGSG----YGDLVVRVHIDVP 345

Length = 382

>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional

 Score =  255 bits (652), Expect = 2e-81
 Identities = 129/352 (36%), Positives = 188/352 (53%), Gaps = 28/352 (7%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           + +D YE+LG+ + AS DEIKKAF  LA +YHPD NK N  A+ KF+EI +AY+ L D +
Sbjct: 2   ASKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQ 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDA--EGFRYAYQTHFSDSFHKIFSEIFEDE 197
           K+AQYD+          +   D  G    G     GF ++    F D F   F   F   
Sbjct: 62  KKAQYDQ----------FGTADFNGAGGFGSGGFGGFDFSDMGGFGDIFDSFFGGGFGSS 111

Query: 198 TS-----HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTC 252
           +          DI+  + L+F EA  G  K +S      C++C+G G       K C  C
Sbjct: 112 SRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKC 171

Query: 253 RGIGRVTI---PPF-----TSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV 304
            G G++ +    P      T+TC  C G G++I+D C  C G G V   +++KV +PAGV
Sbjct: 172 GGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGV 231

Query: 305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKV 364
           D+G+ I +   G  G  G   G+L+I ++VA    F R G D+Y+D +ISF +A LG ++
Sbjct: 232 DTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEI 291

Query: 365 DVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAK-NGLFLDHGDQYVRFRVNFP 415
            VPT+ G+V+ ++P G QPG +  L+GKG+ + N      G+QYV   V+ P
Sbjct: 292 KVPTVDGEVKYEVPAGTQPGTVFRLKGKGVPRVNS--TGRGNQYVTVIVDIP 341

Length = 380

>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional

 Score =  233 bits (596), Expect = 4e-73
 Identities = 135/351 (38%), Positives = 185/351 (52%), Gaps = 30/351 (8%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138
           ++ RD YE+LG+ ++AS ++IKKA+  LA +YHPD NK  P A+ KF+EI +AY  L D+
Sbjct: 2   ATTRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE-PDAEEKFKEISEAYAVLSDA 60

Query: 139 EKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDET 198
           EKRAQYDR    G +N +YSA D            FR A    F D F   F        
Sbjct: 61  EKRAQYDRFGHAGIDN-QYSAEDI-----------FRGADFGGFGDIFEMFFGG--GGRR 106

Query: 199 SHFAP----DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRG 254
               P    D++ +L ++  EAA G  K +       C +C G G       K C TC G
Sbjct: 107 GRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGG 166

Query: 255 IGRVTIPP--------FTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDS 306
            G+VT            T+TCSTC G G++I+  C  C G+G V   +++ V +PAG DS
Sbjct: 167 TGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADS 226

Query: 307 GDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDV 366
           G  +++   G AG  G   G+L+I L V +   F R G D+  +  ISFTQA LG  + V
Sbjct: 227 GLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMV 286

Query: 367 PTLSGKVQVKIPKGVQPGQLLVLRGKGLAK-NGLFLDHGDQYVRFRVNFPT 416
           PTL GKV++ IP G Q   +  L+ KG+ + +G     GDQ V+  V  PT
Sbjct: 287 PTLYGKVKMNIPPGTQTHSVFRLKDKGMPRLHG--HGKGDQLVKVIVKTPT 335

Length = 377

>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional

 Score =  233 bits (595), Expect = 4e-73
 Identities = 136/354 (38%), Positives = 181/354 (51%), Gaps = 36/354 (10%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138
             KRD YE+LGV  +AS++EIKK++  LA +YHPD N  +  A+  F+E  +AYE L D 
Sbjct: 1   MVKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDP 60

Query: 139 EKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDET 198
           +KR  YD+    G     +S     GF    D           FS SF  IF + F    
Sbjct: 61  KKRGIYDQYGHEGLSGTGFS-----GFSGFDDI----------FS-SFGDIFEDFFGFGG 104

Query: 199 -----SHFAP----DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKIC 249
                S  A     D++ +L L F EAA G  K +       C+ CHG G         C
Sbjct: 105 GRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTSPTTC 164

Query: 250 STCRGIGRVTIPP--FT--STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305
             C G G+VT     F+  +TC  C+G+G++I   C TC G G V   K V+V IPAGVD
Sbjct: 165 PQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVD 224

Query: 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD 365
           +G  +R+   G AG RG   G+L++ L V     F RDG DV+    ISF QA LG +++
Sbjct: 225 TGSRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIE 284

Query: 366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAK---NGLFLDHGDQYVRFRVNFPT 416
           VPTL G+ ++KIPKG QPG +   +GKG+      G     GDQ +   V  PT
Sbjct: 285 VPTLEGERELKIPKGTQPGDIFRFKGKGIPSLRGGG----RGDQIIEVEVKVPT 334

Length = 366

>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional

 Score =  229 bits (585), Expect = 1e-71
 Identities = 123/355 (34%), Positives = 178/355 (50%), Gaps = 29/355 (8%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDAN-KNNPSAKRKFQEIRDAYETLRDSE 139
           K+D YE+LGV  NA+Q+EIK+A+  L K++HPD + +N   A++KF+EI++AYE L D +
Sbjct: 3   KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQ 62

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHK-IFSEIFED-- 196
           KRA YDR          Y  G+   ++      GF       F + F++ IF   F +  
Sbjct: 63  KRAMYDRF--------GY-VGEQPPYQETESGGGFFEDIFKDFENIFNRDIFDIFFGERR 113

Query: 197 ------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICS 250
                 E +    DI+ E+ ++ ++   G    V +D +  C  C G G    +    C 
Sbjct: 114 TQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTGVEPGSGYVTCP 173

Query: 251 TCRGIGRV---TIPPF-----TSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPA 302
            C G GR+       F       TC  C G G+I  ++C  C GSG +       V IPA
Sbjct: 174 KCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPA 233

Query: 303 GVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGG 362
           GV+ G  +R+   GNAG  G  +G+L++ ++V  DP F R G+D+  D  I + QAILG 
Sbjct: 234 GVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGT 293

Query: 363 KVDVPTLSGKV-QVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
            V+VP   G    +KIP G QP  +  L+GKGL  N  +   GD  V   V  P 
Sbjct: 294 TVEVPLPEGGTTMLKIPPGTQPETVFRLKGKGLP-NMRYGRRGDLIVNVHVEIPK 347

Length = 369

>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional

 Score =  229 bits (585), Expect = 2e-71
 Identities = 126/361 (34%), Positives = 180/361 (49%), Gaps = 35/361 (9%)

Query: 82  RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR 141
           +D Y+ LGV  +AS +EIKKA+  LA++ HPDAN  +P+A+ +F+ + +A++ L D  KR
Sbjct: 9   KDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKR 68

Query: 142 AQYDRRRS-----RGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHK-------- 188
            +YD  R                G   GF   GD   F      + +D F          
Sbjct: 69  KEYDETRRLFAGGGFGGRRFDGGGGFGGFGTGGDGAEF------NLNDLFDAAGRGGGGG 122

Query: 189 ---IFSEIFEDETSHFAP-------DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGR 238
              +F  +F        P       D++ E  L F EAAKG T  +   +  PC +CHG 
Sbjct: 123 IGDLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTMPLRLTSPAPCTTCHGS 182

Query: 239 GFPADAKTKICSTCRGIGRVTIPP----FTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVK 294
           G       K+C TC G G ++       F+  C+ C+G G II+D C  CKG+GV    +
Sbjct: 183 GARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIEDPCEECKGTGVTTRTR 242

Query: 295 EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNIS 354
            + V IP GV+ G  IR+   G AG RG   G+L++ + V  D +F RDG D+ V   +S
Sbjct: 243 TINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVS 302

Query: 355 FTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNF 414
           FT+  LG  + VPTL G V VK+P G   G++L +RG+G+ K       GD  V  +V  
Sbjct: 303 FTELALGSTLSVPTLDGPVGVKVPAGTADGRILRVRGRGVPKRS--GGAGDLLVTVKVAV 360

Query: 415 P 415
           P
Sbjct: 361 P 361

Length = 392

>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional

 Score =  227 bits (581), Expect = 7e-71
 Identities = 126/351 (35%), Positives = 180/351 (51%), Gaps = 19/351 (5%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEK 140
           ++D Y++LGVP++A++ EIKKA+  LA++YHPDANK +  A+ +F+EI +AY+ L D +K
Sbjct: 8   EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKK 67

Query: 141 RAQYDRRRS---RGSENEKYSAGDAEGFRY-------AGDAEGFRYAYQTHFSDSFHKIF 190
           R +YD  RS    G        G   GF +        G   G          D F  +F
Sbjct: 68  RKEYDEARSLFGNGGFRPGPGGGGGGGFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGGLF 127

Query: 191 SEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICS 250
           +            D++ E+ LSF EA  G T  +   +  PC +C G G       ++C 
Sbjct: 128 NRGGRRTQPRRGADVESEVTLSFTEAIDGATVPLRLTSQAPCPACSGTGAKNGTTPRVCP 187

Query: 251 TCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDS 306
           TC G G+V+        +  C  CKG G I  D C+ CKGSG     + ++V IPAGV  
Sbjct: 188 TCSGTGQVSRNSGGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIPAGVSD 247

Query: 307 GDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDV 366
           G  IR+   G  G RG   G+L++ + V   P+F R G ++ V   ++F +A LG +V V
Sbjct: 248 GQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRV 307

Query: 367 PTLSG-KVQVKIPKGVQPGQLLVLRGKGLA-KNGLFLDHGDQYVRFRVNFP 415
           PTL G  V VK+P G   G++L +RGKG   K+G     GD  V   V  P
Sbjct: 308 PTLGGPPVTVKLPPGTPNGRVLRVRGKGAVRKDG---TRGDLLVTVEVAVP 355

Length = 389

>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional

 Score =  227 bits (581), Expect = 9e-71
 Identities = 135/364 (37%), Positives = 184/364 (50%), Gaps = 37/364 (10%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEK 140
           KRD YE+LGV  +A +DEIKKA+  LA +YHPD N +N  A+  F+E+ +AYE L + +K
Sbjct: 2   KRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDK 61

Query: 141 RAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSF----------HKIF 190
           R +YD+    G      SA    G  Y G    F   +   F+D F             F
Sbjct: 62  RRRYDQ---FGHAGVGSSAASGGGPGYGGGGGDFNDIFSA-FNDMFGGGARRGGGSPFGF 117

Query: 191 SEIF-----EDETSHFAP--DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPAD 243
            ++F         S   P  D+++ L L+  E AKG  K +     VPC  C+G G    
Sbjct: 118 EDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKIKKQVPCKECNGTG-SKT 176

Query: 244 AKTKICSTCRGIGRVTIPPFT--------STCSTCKGLGRIIKDHCMTCKGSGVVDGVKE 295
             T+ C TC G G V     T        + C TC G GR++KD C  C G G+  G   
Sbjct: 177 GATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVT 236

Query: 296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISF 355
           VKVT+PAGV  G+ + +   GNAG RG   G+L + ++     +F R+G DV  +  +S+
Sbjct: 237 VKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSY 296

Query: 356 TQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKG---LAKNGLFLDHGDQYVRFRV 412
              +LG KV+VPTL G V++ IP G QP  +L + GKG   L  +G     GDQYVR  V
Sbjct: 297 PDLVLGTKVEVPTLDGAVKLTIPAGTQPETMLRIPGKGIGHLRGSG----RGDQYVRVNV 352

Query: 413 NFPT 416
             P 
Sbjct: 353 FVPK 356

Length = 397

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score =  226 bits (578), Expect = 2e-70
 Identities = 131/363 (36%), Positives = 180/363 (49%), Gaps = 43/363 (11%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138
           + KRD YE+LGV + A+ DEIKKA+   A QYHPD N  +  A+ KF+E  +AY+ L D 
Sbjct: 2   AEKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDP 61

Query: 139 EKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDET 198
           +KR++YD+    G        G A G  ++G  EG          +    +F +IF    
Sbjct: 62  DKRSRYDQFGHAGV------GGAAGGGGFSG--EGMSM-------EDIFSMFGDIFGGHG 106

Query: 199 SHFA-----------------PDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFP 241
             F                   D++V++ L+  E + G  K      +VPC  CHG G  
Sbjct: 107 GGFGGFGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAE 166

Query: 242 ADAKTKICSTCRGIGRVTIPPFT--------STCSTCKGLGRIIKDHCMTCKGSGVVDGV 293
            +  ++ C TC+G G VT    T        STC TC G G+IIK  C  C G G+V G 
Sbjct: 167 GNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGE 226

Query: 294 KEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNI 353
           + + V IPAGV  G  + +   GNAG  G  +G+L + ++    P   RD  D+  +  +
Sbjct: 227 EVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLL 286

Query: 354 SFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAK-NGLFLDHGDQYVRFRV 412
           S   A LGG V+VPT+ GK +VKI  G QPG++L LR KGL   NG     GD  V   V
Sbjct: 287 SVPTAALGGAVEVPTIDGKAKVKIEAGTQPGKVLRLRNKGLPSVNG--YGTGDLLVNVSV 344

Query: 413 NFP 415
             P
Sbjct: 345 YIP 347

Length = 386

>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional

 Score =  223 bits (569), Expect = 4e-69
 Identities = 130/350 (37%), Positives = 180/350 (51%), Gaps = 29/350 (8%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEK 140
           KRD YE+LGV  NA + EIKKA+  LA++YHPD +     A+ KF+EI +AY  L D EK
Sbjct: 4   KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVS-EEEGAEEKFKEISEAYAVLSDDEK 62

Query: 141 RAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEI-FEDETS 199
           R +YD+    G +   +S  D   F      + F+      F      IF    F   + 
Sbjct: 63  RQRYDQFGHAGMDG--FSQEDI--FNNINFEDIFQ-----GFGFGIGNIFDMFGFGGGSR 113

Query: 200 H---FAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIG 256
           H      DI  E+ ++  EAA G  K +       C  C+G      ++ K C TC G G
Sbjct: 114 HGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTG 173

Query: 257 RVTIPPFT--------STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD 308
           +V     T        +TC  C+G G+I++  C  C G GVV   K + V IPAGV++G 
Sbjct: 174 QVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGS 233

Query: 309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPT 368
            +RV   G  G RG + G+L++ +KV    IF R+GA++Y +  ISF QA LG  VDVPT
Sbjct: 234 RLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPT 293

Query: 369 LSGKVQVKIPKGVQPGQLLVLRGKG---LAKNGLFLDHGDQYVRFRVNFP 415
           + G V++KIP G Q G    L+G G   L  +G     G+ YV+ +V  P
Sbjct: 294 IDGPVELKIPAGTQSGTTFRLKGHGMPSLRWSG----KGNLYVKVKVVVP 339

Length = 378

>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional

 Score =  219 bits (559), Expect = 7e-68
 Identities = 133/351 (37%), Positives = 180/351 (51%), Gaps = 36/351 (10%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           SKRD YE+LGV  NAS DE+KKA+  LA++YHPD NK  P A+ KF+E+++AY+TL D +
Sbjct: 2   SKRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA-PDAEDKFKEVKEAYDTLSDPQ 60

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETS 199
           K+A YD+       N+ +  G A  F                    F  IF   F     
Sbjct: 61  KKAHYDQF-GHTDPNQGFGGGGAGDF------------------GGFSDIFDMFFGGGGG 101

Query: 200 HFAP-------DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTC 252
              P       D+Q  + L F EA  G    +       C +CHG G     K + CS C
Sbjct: 102 RRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHC 161

Query: 253 RGIGRVTI---PPF-----TSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV 304
            G G++ +    PF        C  C+G G+IIK  C TC G G V   K++ V +PAG+
Sbjct: 162 GGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGI 221

Query: 305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKV 364
           D G  +RV   G AG  G   G+L++   V     F RDG D+Y +  ++F Q  LG ++
Sbjct: 222 DHGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEI 281

Query: 365 DVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP 415
           +VPTL+GKV++KIP G Q G    LRGKG+  N      GDQ+V+ RV  P
Sbjct: 282 EVPTLNGKVKLKIPAGTQTGTSFRLRGKGVP-NVHGRGQGDQHVQVRVVTP 331

Length = 371

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score =  208 bits (532), Expect = 1e-63
 Identities = 123/350 (35%), Positives = 175/350 (50%), Gaps = 17/350 (4%)

Query: 83  DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRA 142
           D Y +LGV + AS +EIKKA+  LA +YHPD N  +  A+++F+E+ +AYE L D++KR 
Sbjct: 2   DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRE 61

Query: 143 QYDRRRSRGSENEKYSAGDA------EGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIF-- 194
            YDR    G        G A      +  R    A G  +     F +       E F  
Sbjct: 62  SYDRYGKDGPFAGAGGFGGAGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAFGM 121

Query: 195 --EDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTC 252
                 +      +V + LSF EAAKG  K +    +  CD+C G G  +    K+C  C
Sbjct: 122 RGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANSSQGIKVCDRC 181

Query: 253 RGIGRVT----IPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD 308
           +G G+V          STC  C G GR+I D C  C+G G +   + V V IPAGVDSG 
Sbjct: 182 KGSGQVVQSRGFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIPAGVDSGM 241

Query: 309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPT 368
            +++   G+AG  G   G+L++ + V   P+F R G D+ ++  I F  A LG K ++PT
Sbjct: 242 RLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPT 301

Query: 369 L--SGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
           L   G  ++ IP+G+Q G +L +RG+G   N      GD  VR  V  P 
Sbjct: 302 LLKEGTCRLTIPEGIQSGTILKVRGQGFP-NVHGKGRGDLLVRISVETPQ 350

Length = 391

>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional

 Score =  208 bits (530), Expect = 2e-63
 Identities = 118/323 (36%), Positives = 170/323 (52%), Gaps = 16/323 (4%)

Query: 82  RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR 141
           +D Y++LGV + ASQ ++KKA+  LAKQYHPD   +   A++KF+EI  AY+ L+D +KR
Sbjct: 3   QDYYQILGVSKTASQADLKKAYLKLAKQYHPD-TTDAKDAEKKFKEINAAYDVLKDEQKR 61

Query: 142 AQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHF 201
           A YDR      +N++   G        G+  GF       F D F            +  
Sbjct: 62  AAYDRFGHDAFQNQQSRGG-------GGNHGGFHPDINDIFGDFFSDFMGGSRRSRPTSS 114

Query: 202 ---APDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIG-- 256
                D++  L ++  EA  G  K++SF + V CD+CHG G         C  C G+G  
Sbjct: 115 KVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVGAT 174

Query: 257 RVTIPPFT--STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPE 314
           R+    FT    C  C+G G+IIK+ C  C G G     + + V IPAGV++G  IR   
Sbjct: 175 RMQQGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTG 234

Query: 315 AGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLS-GKV 373
            G AG RG   G+L++ + +    I+  DGA+++    ISF  A LGG+++VP +  GKV
Sbjct: 235 EGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKV 294

Query: 374 QVKIPKGVQPGQLLVLRGKGLAK 396
            + IP G Q G  L LR KG++K
Sbjct: 295 NLTIPAGTQNGDQLRLRSKGMSK 317

Length = 372

>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional

 Score =  205 bits (522), Expect = 3e-62
 Identities = 112/351 (31%), Positives = 178/351 (50%), Gaps = 21/351 (5%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
            K+D YE+LGV + AS+ EI++A+  LAKQYHPD NK+ P A  K  EI +A + L D +
Sbjct: 2   KKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKS-PDAHDKMVEINEAADVLLDKD 60

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETS 199
           KR QYD+    G      S+G +  F   GD E       +    SF  IFS+ F    S
Sbjct: 61  KRKQYDQF---GHAAFDGSSGFSSNF---GDFEDLFSNMGSSGFSSFTNIFSDFFGSNKS 114

Query: 200 HF-----APDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRG 254
            +        + +++ L+F E   G  K +  D    C  C G G  +++   IC+ C G
Sbjct: 115 DYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHG 174

Query: 255 IGRVTIP----PF----TSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDS 306
            G V +      F    ++ C+ C G G+IIK+ C  CKG G     K+++V IP G+  
Sbjct: 175 TGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRP 234

Query: 307 GDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSR-DGADVYVDSNISFTQAILGGKVD 365
              I++ + G+A      +G+L I + + +  +F   +  D+ +  NIS+  AILG ++ 
Sbjct: 235 NQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEII 294

Query: 366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
           + TL G ++ K+PK +   +L+++  KGL K+      GD  ++  +  P 
Sbjct: 295 IKTLDGDIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPK 345

Length = 372

>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional

 Score =  204 bits (519), Expect = 7e-62
 Identities = 115/355 (32%), Positives = 175/355 (49%), Gaps = 35/355 (9%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           S+R  Y++LGV ++A+ +EIK A+  LA +YHPD NK N  ++ KF+E  +AYE LRD +
Sbjct: 2   SERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPK 61

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSD---SFHKIFSEIFED 196
           KR  YD+    G                   A GF     T FSD    F  IF + F  
Sbjct: 62  KRQAYDQFGKAG---------------VNAGAGGFGQGAYTDFSDIFGDFGDIFGDFFGG 106

Query: 197 ETS-----------HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAK 245
                             D++  L +S  +AA G    +       C  C+G G    + 
Sbjct: 107 GRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGASKGSS 166

Query: 246 TKICSTCRGIGRVT----IPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIP 301
              C  C G G++          +TC TC+G G +I + C TC G G+ +  + + + IP
Sbjct: 167 PTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIP 226

Query: 302 AGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILG 361
            GV++G  ++V   G AG  G  HG+L++   +    +F R G D+ +   IS  QAILG
Sbjct: 227 PGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILG 286

Query: 362 GKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP 415
            +++VPT+ GK  ++KIP+G + GQ+  L+G G+   G +   GDQ+V  ++  P
Sbjct: 287 AEIEVPTIDGKKAKMKIPEGTESGQVFRLKGHGMPYLGAY-GKGDQHVIVKIEIP 340

Length = 372

>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional

 Score =  200 bits (510), Expect = 2e-60
 Identities = 122/355 (34%), Positives = 160/355 (45%), Gaps = 43/355 (12%)

Query: 82  RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR 141
           RD Y LLGV  NAS  EIK+A+  LA++ HPD N +   A+ KF+EI  AYE L D EKR
Sbjct: 3   RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD-EEAQEKFKEISVAYEVLSDPEKR 61

Query: 142 AQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHF 201
              D              G   GF   GD                  +F   F    +  
Sbjct: 62  RIVDLGGDPLESAGGGGGGFGGGFGGLGD------------------VFEAFFGGGAASR 103

Query: 202 AP--------DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCR 253
            P        D  + + L   E A G TK V+ D  V CD CHG+G   D+K   C TC 
Sbjct: 104 GPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCG 163

Query: 254 GIGRVTIPP-------FTST-CSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305
           G G V            TS  C TC+G+G +I D C  C G G V   +E+ V IPAGV 
Sbjct: 164 GRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVG 223

Query: 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD 365
            G  IR+   G  G  G   G+L++++      +F RDG D++   ++    A LG  V 
Sbjct: 224 DGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVT 283

Query: 366 VPTLS-GKVQVKIPKGVQPGQLLVLRGKGLAK---NGLFLDHGDQYVRFRVNFPT 416
           V  +  G  ++ IP G QPG ++ LRG+G+      G     GD +    V  PT
Sbjct: 284 VEAILDGPSEITIPPGTQPGSVITLRGRGMPHLRSGG----RGDLHAHVEVVVPT 334

Length = 378

>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional

 Score =  199 bits (507), Expect = 3e-60
 Identities = 127/363 (34%), Positives = 183/363 (50%), Gaps = 55/363 (15%)

Query: 82  RDPYELLGVPENASQDEIKKAFHMLAKQYHPDAN-KNNPSAKRKFQEIRDAYETLRDSEK 140
           +D Y++LGV  NASQ++IKKAF  LAK++HPD +  N   A+ KF+EI +AYE L D +K
Sbjct: 3   KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQK 62

Query: 141 RAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIF------ 194
           R QYD+    G+ +            +      F +   THFSD  + IF++IF      
Sbjct: 63  RRQYDQT---GTVD------------FGAGGSNFNWDNFTHFSD-INDIFNQIFGGNFGS 106

Query: 195 --------EDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKT 246
                   +  T +   DI   L +S  +A  G  K + +     C  C G G   + K 
Sbjct: 107 DFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTG-AKNGKL 165

Query: 247 KICSTCRGIGR------------VTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVK 294
             C TC G G+            VT+    +TC TC G GRI ++ C  C G+G V   +
Sbjct: 166 ITCPTCHGTGQQRIVRGQGFFRMVTV----TTCRTCGGRGRIPEEKCPRCNGTGTVVVNE 221

Query: 295 EVKVTIPAGVDSGDTIRVPEAGNA-GGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNI 353
           ++ V IP G      +RV   G + GGR    G+L++ L+V +DP   R   D+YVD  I
Sbjct: 222 DISVKIPKGATDNLRLRVKGKGQSYGGRT---GDLYVVLRVNNDPNIQRINDDLYVDQKI 278

Query: 354 SFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAK-NGLFLDHGDQYVRFRV 412
           +F QA LGG++++     K  +KIP+G QPG++L ++G G+   NG     GD  VR  V
Sbjct: 279 NFPQAALGGEIEIKLFREKYNLKIPEGTQPGEVLKIKGAGMPHLNG--HGSGDLLVRINV 336

Query: 413 NFP 415
             P
Sbjct: 337 EVP 339

Length = 365

>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional

 Score =  197 bits (503), Expect = 2e-59
 Identities = 122/350 (34%), Positives = 165/350 (47%), Gaps = 38/350 (10%)

Query: 83  DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRA 142
           D YELLGV   AS DEIK A+  LA +YHPD NK    A  KF +I +AY  L D+EKRA
Sbjct: 3   DYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE-KGAAEKFAQINEAYAVLSDAEKRA 61

Query: 143 QYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEI-----FEDE 197
            YDR  +  +       GD  G        GF         D F ++F            
Sbjct: 62  HYDRFGT--APGAGMPGGDPFG------GMGFDPM------DIFEQLFGGAGFGGGRGRR 107

Query: 198 TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHG-RGFPADAKTKICSTCRGIG 256
                 D++ E  ++  +A  G    V  D    C+ CHG R  P     K C TCRG G
Sbjct: 108 GPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAG 167

Query: 257 RV-----TIPPFTST---CSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD 308
            V     TI     T   C TC+G G+II D C  C+G G     + VKV +P G+D G 
Sbjct: 168 AVRAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGY 227

Query: 309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPT 368
            IRV   GN G  G  +G+L++ +++   P   R+   +  ++ I F +A LGG++ VPT
Sbjct: 228 RIRVAGMGNEGPGG--NGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPT 285

Query: 369 LSGKVQVKIPKGVQPGQLLVLRGKGLAK---NGLFLDHGDQYVRFRVNFP 415
           L G   +++  G Q G L  LRG+G+ +    G     GD  V + +  P
Sbjct: 286 LDGPQVIEVKPGTQHGDLHRLRGQGMPRLQGAGT----GDLIVEYEIAVP 331

Length = 371

>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional

 Score =  195 bits (498), Expect = 7e-59
 Identities = 112/322 (34%), Positives = 177/322 (54%), Gaps = 15/322 (4%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEK 140
           KRD YE+LG+ + AS+DEIKKA+  +A +YHPD NK N  A+  F+E  +AYE L D  K
Sbjct: 2   KRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNK 61

Query: 141 RAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSH 200
           RAQYDR      E      G  EGF  +G   GF   ++  F D F   F+     + + 
Sbjct: 62  RAQYDRFGHTAFE----GGGGFEGF--SGGFSGFSDIFED-FGDIFDSFFTGNRGQDKNR 114

Query: 201 F---APDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGR 257
                 D+  ++ +S  +A  G   +++    + C+SC G+         IC+ C G GR
Sbjct: 115 KHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGR 174

Query: 258 VT----IPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVP 313
           V         T+TC  C G G+II + C +CKG G +   + +++ IPAG+D    I++ 
Sbjct: 175 VMQGGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKMR 234

Query: 314 EAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK- 372
             G+     +Q+G+L+IK+ +    IF R+G D+Y    ISFTQA LG ++ + T++ K 
Sbjct: 235 GKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKK 294

Query: 373 VQVKIPKGVQPGQLLVLRGKGL 394
           +++KIPKG +  + ++++ +G+
Sbjct: 295 IKIKIPKGTENDEQIIIKNEGM 316

Length = 365

>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40

 Score =  167 bits (425), Expect = 2e-50
 Identities = 58/128 (45%), Positives = 82/128 (64%), Gaps = 1/128 (0%)

Query: 289 VVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVY 348
            V   K + V IPAGVD G  +R+   G+AG  G   G+L++ ++V   P+F RDG D+Y
Sbjct: 30  RVREKKTLTVKIPAGVDDGQRLRLRGEGDAGPNGGPPGDLYVVIRVKPHPVFRRDGNDLY 89

Query: 349 VDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYV 408
            +  IS T+A+LGG+++VPTL GKV++KIP G QPG +L L+GKG+ +       GD YV
Sbjct: 90  CEVPISLTEALLGGEIEVPTLGGKVKLKIPPGTQPGTVLRLKGKGMPRLRGG-GRGDLYV 148

Query: 409 RFRVNFPT 416
             +V FP 
Sbjct: 149 EVKVEFPK 156

The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70. Length = 158

>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional

 Score =  171 bits (434), Expect = 2e-49
 Identities = 108/326 (33%), Positives = 167/326 (51%), Gaps = 39/326 (11%)

Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY 144
           YE+L V ++++Q+ IKK++  LA +YHPD N  +  A+ KF+ I +AY  L D +KRA Y
Sbjct: 6   YEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALY 65

Query: 145 DRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------- 196
           DR                +G   AG       A Q+ FSD F  + S  FED        
Sbjct: 66  DRY-------------GKKGLNQAG-------ASQSDFSDFFEDLGS-FFEDAFGFGARG 104

Query: 197 ---ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCR 253
              + S  APD    + LSF EA  GC K +       C+SC G G   D   + C  C 
Sbjct: 105 SKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTG-AKDKALETCKQCN 163

Query: 254 GIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309
           G G+V +      F  TC  C+G G+IIK  C  CKG   +   +E+   IP G+D  + 
Sbjct: 164 GQGQVFMRQGFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNR 223

Query: 310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTL 369
           + +   GN   +G++ G+L+++ +V +D  F R+G D+++++ + FT   LG  + VP+L
Sbjct: 224 MVLKNKGNEYEKGKR-GDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSL 282

Query: 370 SG-KVQVKIPKGVQPGQLLVLRGKGL 394
            G ++++KIP+  +  Q    R +G+
Sbjct: 283 KGDELELKIPRNARDRQTFAFRNEGV 308

Length = 369

>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional

 Score =  144 bits (364), Expect = 8e-39
 Identities = 104/345 (30%), Positives = 147/345 (42%), Gaps = 42/345 (12%)

Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY 144
           YE+L + ++ +  EIKKA+  LA ++HPD   +      KF+EI  AYE L D EKR  Y
Sbjct: 31  YEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD----PEKFKEISRAYEVLSDPEKRKIY 86

Query: 145 DRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPD 204
           D     G E       DA                    SD F  IF    +        D
Sbjct: 87  DEYGEEGLEG-GEQPADA--------------------SDLFDLIFGGGRKPGGKKRGED 125

Query: 205 IQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIG-RVTIPPF 263
           I   L ++  +   G  + ++ +  V C +C G G P DA    C  C G G RV I   
Sbjct: 126 IVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVD-CKLCNGQGIRVQIRQM 184

Query: 264 TS-------TCSTCKGLGRII--KDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPE 314
            S       TC++C G G+II     C  C G GV    K ++V I  GV   +  ++  
Sbjct: 185 GSMIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVP--NQHKITF 242

Query: 315 AGNAGGR-GRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG-K 372
            G A  +     GN+   L       F R+G D+++   IS  +A+ G    +  L G K
Sbjct: 243 HGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRK 302

Query: 373 VQVKIPKG--VQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP 415
           + V  P G  V+PG + V+  +G+         G+ YV F V FP
Sbjct: 303 LLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFP 347

Length = 421

>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional

 Score =  130 bits (329), Expect = 8e-35
 Identities = 90/353 (25%), Positives = 145/353 (41%), Gaps = 99/353 (28%)

Query: 82  RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR 141
           +D Y ++GV        IK A+  LA++YHPD +K  P A+ +F+E+ +A+E L D ++R
Sbjct: 4   KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKE-PDAEARFKEVAEAWEVLSDEQRR 62

Query: 142 AQYDR-----------RRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIF 190
           A+YD+           R+ +  + + ++A D                    F D    IF
Sbjct: 63  AEYDQLWQHRNDPQFNRQFQHGDGQSFNAED--------------------FDD----IF 98

Query: 191 SEIFEDETSHF-------APDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPAD 243
           S IF                DI++E+ +   E      + +S+                 
Sbjct: 99  SSIFGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISY----------------- 141

Query: 244 AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG 303
                           +P + +        G I ++   T         VK     IPAG
Sbjct: 142 ---------------NLPVYNA-------FGMIEQEIPKTLN-------VK-----IPAG 167

Query: 304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGK 363
           V +G  IR+   G  G  G  +G+L++ + +A  P+F   G D+ +   ++  +A LG K
Sbjct: 168 VGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAK 227

Query: 364 VDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLA-KNGLFLDHGDQYVRFRVNFP 415
           V VPTL   + + IP G Q GQ L ++GKGL  K       GD Y   ++  P
Sbjct: 228 VTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQ----TGDLYAVLKIVMP 276

Length = 306

>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain

 Score =  109 bits (275), Expect = 8e-30
 Identities = 38/63 (60%), Positives = 48/63 (76%)

Query: 83  DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRA 142
           D YE+LGVP +AS +EIKKA+  LA +YHPD N  +P+A+ KF+EI +AYE L D EKRA
Sbjct: 1   DYYEILGVPRDASDEEIKKAYRKLALKYHPDKNPGDPAAEEKFKEINEAYEVLSDPEKRA 60

Query: 143 QYD 145
            YD
Sbjct: 61  IYD 63

DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature. Length = 63

>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain

 Score = 92.6 bits (231), Expect = 1e-23
 Identities = 31/55 (56%), Positives = 42/55 (76%)

Query: 83  DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRD 137
           D Y++LGVP +AS +EIKKA+  LA +YHPD N ++P A+ KF+EI +AYE L D
Sbjct: 1   DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. Length = 55

>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional

 Score = 98.9 bits (246), Expect = 2e-23
 Identities = 61/160 (38%), Positives = 82/160 (51%), Gaps = 17/160 (10%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           + +D Y +LGVP+NASQDEIKKAF  LA++YHPD NK +P A+ KF+EI +AY  L D E
Sbjct: 2   AYKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPE 60

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIF--------- 190
           KR  YD   +  +       G   G    GD  GF       FSD F ++F         
Sbjct: 61  KRRIYDTYGT--TAASAGWQGPPPGPPGGGDFSGFNVG---DFSDFFQQLFGGRGGFGGF 115

Query: 191 SEIFED--ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDA 228
            ++F      +    D++ EL L+  EA +G  K V    
Sbjct: 116 GDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVVEVAG 155

Length = 291

>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain

 Score = 91.5 bits (228), Expect = 3e-23
 Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 1/60 (1%)

Query: 82  RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS-AKRKFQEIRDAYETLRDSEK 140
            D YE+LGVP +AS DEIKKA+  LA +YHPD N  +   A+ KF+EI +AYE L D EK
Sbjct: 1   TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60

Length = 60

>gnl|CDD|216569 pfam01556, DnaJ_C, DnaJ C terminal domain

 Score = 91.1 bits (227), Expect = 8e-23
 Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)

Query: 346 DVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHG 404
           D+YV   IS  +A+LGG V+VPTL G+ V++KIP G QPG  L ++GKG+  N      G
Sbjct: 1   DLYVTLPISLKEALLGGTVEVPTLDGRKVKIKIPAGTQPGDKLRIKGKGMPINKGGNGRG 60

Query: 405 DQYVRFRVNFPT 416
           D  V   V  P 
Sbjct: 61  DLIVTLNVKIPK 72

This family consists of the C terminal region form the DnaJ protein. Although the function of this region is unknown, it is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. Length = 81

>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional

 Score = 91.5 bits (227), Expect = 8e-21
 Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 8/125 (6%)

Query: 292 GVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS 351
             + + V IP GV  G  IR+       G+GRQ G+L++ +++   P+F  +G D+Y   
Sbjct: 154 AGERLSVRIPPGVREGQVIRLA------GKGRQGGDLYLVVRLLPHPVFRLEGDDLYATV 207

Query: 352 NISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFR 411
           ++    A++GGKV V TL G V+V IP   Q G+ L L+GKG  +       GDQY   R
Sbjct: 208 DVPAPIAVVGGKVRVMTLDGPVEVTIPPRTQAGRKLRLKGKGWPRGP--AGRGDQYAEVR 265

Query: 412 VNFPT 416
           +  PT
Sbjct: 266 ITIPT 270

Length = 291

>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

 Score = 84.9 bits (209), Expect = 6e-19
 Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 5/128 (3%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS-AKRKFQEIRDAYETLRDSE 139
             D YE+LGVP NAS +EIKKA+  LA +YHPD N  +P  A+ KF+EI +AYE L D E
Sbjct: 5   LLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPE 64

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQT---HFSDSFHKIFSEIFED 196
           +RA+YD+  +      K S  ++  F   G  +      +              +++   
Sbjct: 65  RRAEYDKIGADNYFPGK-SYRESAAFPIEGSLQLTGLYEEWRGKRNKTERKASLADLLSR 123

Query: 197 ETSHFAPD 204
             S  A  
Sbjct: 124 GLSGLAAA 131

Length = 237

>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ

 Score = 86.8 bits (214), Expect = 3e-18
 Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 1/85 (1%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEK 140
           KRD YE+LG+  +A + EIKKAF  LAK+YHPD NK  P A   F EI +A + L + +K
Sbjct: 1   KRDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNK-APDAASIFAEINEANDVLSNPKK 59

Query: 141 RAQYDRRRSRGSENEKYSAGDAEGF 165
           RA YD+    G + E      A+ F
Sbjct: 60  RANYDKYGHDGVDREDDFDFQADVF 84

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility [Cellular processes, Chemotaxis and motility]. Length = 871

>gnl|CDD|199908 cd10719, DnaJ_zf, Zinc finger domain of DnaJ and HSP40

 Score = 75.0 bits (185), Expect = 4e-17
 Identities = 27/65 (41%), Positives = 32/65 (49%), Gaps = 8/65 (12%)

Query: 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMT 283
           C +C+G G     K K C TC G G+V              +TC TC G G+IIKD C  
Sbjct: 1   CPTCNGSGAKPGTKPKTCPTCGGSGQVRQVQGTGFGFFQTQTTCPTCGGTGKIIKDPCPK 60

Query: 284 CKGSG 288
           CKG G
Sbjct: 61  CKGKG 65

Central/middle or CxxCxGxG-motif containing domain of DnaJ/Hsp40 (heat shock protein 40). DnaJ proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonin family. Hsp40 proteins are characterized by the presence of an N-terminal J domain, which mediates the interaction with Hsp70. This central domain contains four repeats of a CxxCxGxG motif and binds to two Zinc ions. It has been implicated in substrate binding. Length = 65

>gnl|CDD|216058 pfam00684, DnaJ_CXXCXGXG, DnaJ central domain

 Score = 63.6 bits (155), Expect = 4e-13
 Identities = 27/65 (41%), Positives = 29/65 (44%), Gaps = 8/65 (12%)

Query: 232 CDSCHGRGFPADAKTKICSTCRGIGRVTI----PPFT----STCSTCKGLGRIIKDHCMT 283
           C  CHG G     K K C  C G G+V      P        TC  C G G+IIKD C  
Sbjct: 1   CPHCHGTGAKPGKKPKTCPQCNGSGQVVKRQRTPGGVFQMQQTCPKCGGTGKIIKDPCKV 60

Query: 284 CKGSG 288
           CKG G
Sbjct: 61  CKGKG 65

The central cysteine-rich (CR) domain of DnaJ proteins contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DNAJ cysteine rich domain and various hydrophobic peptides has been found. Length = 65

>gnl|CDD|236512 PRK09430, djlA, Dna-J like membrane chaperone protein; Provisional

 Score = 56.0 bits (136), Expect = 7e-09
 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 7/61 (11%)

Query: 83  DPYELLGVPENASQDEIKKAFHMLAKQYHPD--ANKNNPS-----AKRKFQEIRDAYETL 135
           D Y++LGV E+    EIK+A+  L  ++HPD    K  P      AK K QEI+ AYE +
Sbjct: 201 DAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELI 260

Query: 136 R 136
           +
Sbjct: 261 K 261

Length = 267

>gnl|CDD|227694 COG5407, SEC63, Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

 Score = 56.1 bits (135), Expect = 2e-08
 Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 5/67 (7%)

Query: 83  DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKR-----KFQEIRDAYETLRD 137
           DPYE+LG+ ++ S+ +IKK + ML+ ++HPD      +  R     K++ I  AY  L D
Sbjct: 99  DPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTD 158

Query: 138 SEKRAQY 144
            ++R  Y
Sbjct: 159 KKRRENY 165

Length = 610

>gnl|CDD|224002 COG1076, DjlA, DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

 Score = 48.9 bits (117), Expect = 7e-07
 Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 7/63 (11%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPD--ANKNNP-----SAKRKFQEIRDAYE 133
           + D  ++LGV   A QD IKKA+  L  + HPD  A K          K K QEI++AYE
Sbjct: 112 REDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYE 171

Query: 134 TLR 136
            ++
Sbjct: 172 DIK 174

Length = 174

>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40

 Score = 47.4 bits (114), Expect = 2e-06
 Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 13/78 (16%)

Query: 345 ADVYVDSNISFTQAILGGKVDVPTLSG---------KVQVKIPKGVQPGQLLVLRGKGLA 395
           AD+  D  ++  +A  G + ++  +            + VKIP GV  GQ L LRG+G A
Sbjct: 1   ADLRYDLELTLEEAYFGKEKEI-KIPRKVTRVREKKTLTVKIPAGVDDGQRLRLRGEGDA 59

Query: 396 -KNGLFLDHGDQYVRFRV 412
             NG     GD YV  RV
Sbjct: 60  GPNG--GPPGDLYVVIRV 75

The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70. Length = 158

>gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional

 Score = 49.4 bits (117), Expect = 2e-06
 Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)

Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY 144
           Y++LGV  NA   EI + +  LA+ Y+P     N     KF++I +AY+ L D +K+  Y
Sbjct: 576 YDILGVGVNADMKEISERYFKLAENYYPPKRSGN-EGFHKFKKINEAYQILGDIDKKKMY 634

Query: 145 DR 146
           ++
Sbjct: 635 NK 636

Length = 1136

>gnl|CDD|211601 TIGR00714, hscB, Fe-S protein assembly co-chaperone HscB

 Score = 46.0 bits (109), Expect = 5e-06
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)

Query: 96  QDEIKKAFHMLAKQYHPDANKN---NPSAKRKFQEIRDAYETLRDSEKRAQY 144
           Q  ++K +  L  QYHPDA+       +A ++   +  AY TL+D  +RA+Y
Sbjct: 5   QSRLRKRYRQLQAQYHPDASGMAQEQLAASQQSTTLNQAYHTLKDPLRRAEY 56

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock [Protein fate, Protein folding and stabilization]. Length = 155

>gnl|CDD|167217 PRK01356, hscB, co-chaperone HscB; Provisional

 Score = 45.6 bits (108), Expect = 7e-06
 Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 5/65 (7%)

Query: 85  YELLGVPENASQD--EIKKAFHMLAKQYHPDANKNNPSAKRKFQ---EIRDAYETLRDSE 139
           ++LLG+P+  + D   ++K +  +  +YHPD  K     ++      E+ +AY TL+D+ 
Sbjct: 5   FQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDAL 64

Query: 140 KRAQY 144
           KRA+Y
Sbjct: 65  KRAEY 69

Length = 166

>gnl|CDD|216569 pfam01556, DnaJ_C, DnaJ C terminal domain

 Score = 42.5 bits (101), Expect = 2e-05
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 291 DGVKEVKVTIPAGVDSGDTIRVPEAG-NAGGRGRQHGNLFIKLKV 334
           DG ++VK+ IPAG   GD +R+   G      G   G+L + L V
Sbjct: 25  DG-RKVKIKIPAGTQPGDKLRIKGKGMPINKGGNGRGDLIVTLNV 68

This family consists of the C terminal region form the DnaJ protein. Although the function of this region is unknown, it is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. Length = 81

>gnl|CDD|235133 PRK03578, hscB, co-chaperone HscB; Provisional

 Score = 43.1 bits (102), Expect = 5e-05
 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 7/73 (9%)

Query: 79  SSKRDPYELLGVPENASQDE--IKKAFHMLAKQYHPDANKNNPSAKRKFQ-----EIRDA 131
           S K D + L G+P   + DE  +  A+  +  Q HPD       A+++          +A
Sbjct: 3   SLKDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEA 62

Query: 132 YETLRDSEKRAQY 144
           Y+TLRD  KRA+Y
Sbjct: 63  YQTLRDPLKRARY 75

Length = 176

>gnl|CDD|227594 COG5269, ZUO1, Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

 Score = 41.6 bits (97), Expect = 6e-04
 Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 81  KRDPYELLGVPE---NASQDEIKKAFHMLAKQYHPD--ANKNNPSAKRKFQEIRDAYETL 135
           K D Y LLG+ +    A   +I KA      +YHPD  A   N      F+ I+ A E L
Sbjct: 42  KVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVL 101

Query: 136 RDSEKRAQYD 145
            D + R QYD
Sbjct: 102 GDRKLRLQYD 111

Length = 379

>gnl|CDD|179914 PRK05014, hscB, co-chaperone HscB; Provisional

 Score = 39.9 bits (94), Expect = 7e-04
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 13/72 (18%)

Query: 83  DPYELLGVPENASQDEIKKA-----FHMLAKQYHPDANKNNPSAKR-----KFQEIRDAY 132
           D + L G+P   ++ +I        +  L +Q+HPD   N    +R     +   I DAY
Sbjct: 2   DYFTLFGLP---ARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAY 58

Query: 133 ETLRDSEKRAQY 144
           +TL+   KRA+Y
Sbjct: 59  QTLKHPLKRAEY 70

Length = 171

>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ

 Score = 41.0 bits (95), Expect = 0.001
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 2/87 (2%)

Query: 322 GRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGV 381
           G   G+L +  KV     F      ++V + +    A  GG +DV   +    V+IP G+
Sbjct: 723 GNGCGDLKVVFKVIPSNFFQIKNDGLHVAALVDPLVAYNGGIIDVFGPNKLFNVRIPGGI 782

Query: 382 QPGQLLVLRGKGLAKNGLFLDHGDQYV 408
           +    ++ +  GL K     D G   V
Sbjct: 783 KVNDQVIFKDLGLTKT--KYDKGSLIV 807

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility [Cellular processes, Chemotaxis and motility]. Length = 871

>gnl|CDD|224002 COG1076, DjlA, DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 9/70 (12%)

Query: 83  DPYELLGVPENASQD--EIKKAFHMLAKQYHPDANKNNPSAK------RKFQEIRDAYET 134
           D + L G+P     D   +K  +  L + YHPD      S        ++  E+  AY+T
Sbjct: 2   DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPD-RFGKASEAEQRKALQQSAEVNPAYQT 60

Query: 135 LRDSEKRAQY 144
           L+D   RA+Y
Sbjct: 61  LKDPLLRAEY 70

Length = 174

>gnl|CDD|178709 PLN03165, PLN03165, chaperone protein dnaJ-related; Provisional

 Score = 36.7 bits (85), Expect = 0.003
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 14/64 (21%)

Query: 231 PCDSCHGRGFPADAKTKICSTCRGIGRVTI-----PPFTSTCSTCKGLGRIIKDHCMTCK 285
           PC  C G G       ++C  C G G VT+         S C  C G G +    C TC+
Sbjct: 43  PCFPCSGTG------AQVCRFCVGSGNVTVELGGGEKEVSKCINCDGAGSLT---CTTCQ 93

Query: 286 GSGV 289
           GSG+
Sbjct: 94  GSGI 97

Length = 111

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	416
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	100.0
PRK14296	372	chaperone protein DnaJ; Provisional	100.0
PRK14288	369	chaperone protein DnaJ; Provisional	100.0
PRK14279	392	chaperone protein DnaJ; Provisional	100.0
PRK14286	372	chaperone protein DnaJ; Provisional	100.0
PRK14298	377	chaperone protein DnaJ; Provisional	100.0
PRK14284	391	chaperone protein DnaJ; Provisional	100.0
PRK14277	386	chaperone protein DnaJ; Provisional	100.0
PRK14285	365	chaperone protein DnaJ; Provisional	100.0
PTZ00037	421	DnaJ_C chaperone protein; Provisional	100.0
PRK14295	389	chaperone protein DnaJ; Provisional	100.0
PRK14278	378	chaperone protein DnaJ; Provisional	100.0
PRK14301	373	chaperone protein DnaJ; Provisional	100.0
PRK14282	369	chaperone protein DnaJ; Provisional	100.0
PRK14287	371	chaperone protein DnaJ; Provisional	100.0
PRK14276	380	chaperone protein DnaJ; Provisional	100.0
PRK14294	366	chaperone protein DnaJ; Provisional	100.0
PRK14280	376	chaperone protein DnaJ; Provisional	100.0
PRK14297	380	chaperone protein DnaJ; Provisional	100.0
PRK10767	371	chaperone protein DnaJ; Provisional	100.0
PRK14281	397	chaperone protein DnaJ; Provisional	100.0
PRK14291	382	chaperone protein DnaJ; Provisional	100.0
PRK14300	372	chaperone protein DnaJ; Provisional	100.0
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	100.0
PRK14283	378	chaperone protein DnaJ; Provisional	100.0
PRK14290	365	chaperone protein DnaJ; Provisional	100.0
PRK14289	386	chaperone protein DnaJ; Provisional	100.0
PRK14293	374	chaperone protein DnaJ; Provisional	100.0
PRK14292	371	chaperone protein DnaJ; Provisional	100.0
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	100.0
PRK14299	291	chaperone protein DnaJ; Provisional	100.0
PRK10266	306	curved DNA-binding protein CbpA; Provisional	100.0
KOG0713	336	consensus Molecular chaperone (DnaJ superfamily) [	100.0
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	100.0
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	100.0
KOG0714	306	consensus Molecular chaperone (DnaJ superfamily) [	99.88
KOG0716	279	consensus Molecular chaperone (DnaJ superfamily) [	99.78
PF01556	81	CTDII: DnaJ C terminal domain; InterPro: IPR002939	99.76
COG2214	237	CbpA DnaJ-class molecular chaperone [Posttranslati	99.74
KOG0691	296	consensus Molecular chaperone (DnaJ superfamily) [	99.74
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	99.74
KOG0718	546	consensus Molecular chaperone (DnaJ superfamily) [	99.72
KOG0717	508	consensus Molecular chaperone (DnaJ superfamily) [	99.69
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	99.69
KOG0719	264	consensus Molecular chaperone (DnaJ superfamily) [	99.66
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	99.64
KOG0624	504	consensus dsRNA-activated protein kinase inhibitor	99.63
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	99.61
PHA03102	153	Small T antigen; Reviewed	99.59
KOG0721	230	consensus Molecular chaperone (DnaJ superfamily) [	99.57
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	99.52
PRK05014	171	hscB co-chaperone HscB; Provisional	99.5
PRK01356	166	hscB co-chaperone HscB; Provisional	99.48
PRK03578	176	hscB co-chaperone HscB; Provisional	99.47
PRK00294	173	hscB co-chaperone HscB; Provisional	99.47
PRK14282	369	chaperone protein DnaJ; Provisional	99.47
PRK14290	365	chaperone protein DnaJ; Provisional	99.43
PRK14294	366	chaperone protein DnaJ; Provisional	99.4
PRK14298	377	chaperone protein DnaJ; Provisional	99.4
PRK14285	365	chaperone protein DnaJ; Provisional	99.39
KOG0550	486	consensus Molecular chaperone (DnaJ superfamily) [	99.39
PRK10767	371	chaperone protein DnaJ; Provisional	99.37
KOG0720	490	consensus Molecular chaperone (DnaJ superfamily) [	99.36
PTZ00100	116	DnaJ chaperone protein; Provisional	99.36
KOG0722	329	consensus Molecular chaperone (DnaJ superfamily) [	99.36
PRK14301	373	chaperone protein DnaJ; Provisional	99.34
PRK14300	372	chaperone protein DnaJ; Provisional	99.32
PRK14284	391	chaperone protein DnaJ; Provisional	99.31
PRK14287	371	chaperone protein DnaJ; Provisional	99.31
PRK14288	369	chaperone protein DnaJ; Provisional	99.3
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	99.29
PRK14278	378	chaperone protein DnaJ; Provisional	99.28
PRK14279	392	chaperone protein DnaJ; Provisional	99.27
PRK14281	397	chaperone protein DnaJ; Provisional	99.26
PRK14280	376	chaperone protein DnaJ; Provisional	99.26
PRK14276	380	chaperone protein DnaJ; Provisional	99.25
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	99.25
PRK14286	372	chaperone protein DnaJ; Provisional	99.25
PRK14293	374	chaperone protein DnaJ; Provisional	99.23
PRK14297	380	chaperone protein DnaJ; Provisional	99.23
PRK14292	371	chaperone protein DnaJ; Provisional	99.22
PRK14289	386	chaperone protein DnaJ; Provisional	99.22
PRK14295	389	chaperone protein DnaJ; Provisional	99.21
PRK14277	386	chaperone protein DnaJ; Provisional	99.21
PRK14291	382	chaperone protein DnaJ; Provisional	99.2
PRK14296	372	chaperone protein DnaJ; Provisional	99.2
PHA02624	647	large T antigen; Provisional	99.19
PRK14283	378	chaperone protein DnaJ; Provisional	99.18
PRK01773	173	hscB co-chaperone HscB; Provisional	99.18
PTZ00037	421	DnaJ_C chaperone protein; Provisional	99.15
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	99.09
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	99.08
TIGR00714	157	hscB Fe-S protein assembly co-chaperone HscB. This	99.04
KOG1150	250	consensus Predicted molecular chaperone (DnaJ supe	98.87
PRK14299	291	chaperone protein DnaJ; Provisional	98.81
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	98.72
PRK10266	306	curved DNA-binding protein CbpA; Provisional	98.69
PF01556	81	CTDII: DnaJ C terminal domain; InterPro: IPR002939	98.63
PLN03165	111	chaperone protein dnaJ-related; Provisional	98.33
KOG1789	2235	consensus Endocytosis protein RME-8, contains DnaJ	98.31
KOG0568	342	consensus Molecular chaperone (DnaJ superfamily) [	98.26
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	98.26
TIGR02642	186	phage_xxxx uncharacterized phage protein. This unc	98.1
KOG0723	112	consensus Molecular chaperone (DnaJ superfamily) [	97.97
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	97.94
KOG3192	168	consensus Mitochondrial J-type chaperone [Posttran	97.88
COG1107	715	Archaea-specific RecJ-like exonuclease, contains D	97.38
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	97.36
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	96.75
KOG2813	406	consensus Predicted molecular chaperone, contains	96.56
PLN03165	111	chaperone protein dnaJ-related; Provisional	96.53
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	96.27
COG1107	715	Archaea-specific RecJ-like exonuclease, contains D	96.12
TIGR02642	186	phage_xxxx uncharacterized phage protein. This unc	95.85
KOG0431	453	consensus Auxilin-like protein and related protein	95.23
PF03656	127	Pam16: Pam16; InterPro: IPR005341 The Pam16 protei	93.66
KOG2813	406	consensus Predicted molecular chaperone, contains	93.01
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	89.99
KOG2824	281	consensus Glutaredoxin-related protein [Posttransl	86.58
PF11833	194	DUF3353: Protein of unknown function (DUF3353); In	82.69
PF14687	112	DUF4460: Domain of unknown function (DUF4460)	81.28

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=8.8e-87  Score=644.27  Aligned_cols=320  Identities=45%  Similarity=0.818  Sum_probs=287.3

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCcccc
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYS  158 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~  158 (416)
                      ++.+|||+||||+++||.+|||+|||+||++||||+|+.+++|+++|++|++||||||||+||++||++|..+..+..  
T Consensus         1 ~~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg--   78 (371)
T COG0484           1 MAKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGG--   78 (371)
T ss_pred             CCccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCC--
Confidence            356899999999999999999999999999999999998899999999999999999999999999999887654211  


Q ss_pred             CCCCCCCccCCCCCCceeccccccccchhhhhhhhhcCC--------CcccCCCeEEEEEeeeeecccCcceeeeeeeee
Q 014884          159 AGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE--------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFV  230 (416)
Q Consensus       159 ~~~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~--------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~  230 (416)
                         ++++       .|.     .|+.+|.|+|+++|++.        ...++.|+.+.|+|||+||+.|+++++.+++.+
T Consensus        79 ---~gg~-------g~~-----~fgg~~~DIF~~~FgGg~~~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~  143 (371)
T COG0484          79 ---FGGF-------GFG-----GFGGDFGDIFEDFFGGGGGGRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSV  143 (371)
T ss_pred             ---cCCC-------CcC-----CCCCCHHHHHHHhhcCCCcccCCCCCcccCCceEEEEEeEhhhhccCceeeEecceee
Confidence               1111       111     11124567777777321        245799999999999999999999999999999


Q ss_pred             ecCCCCCCCCCCCCcccccCCCcceeEEEeCC------CcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccc
Q 014884          231 PCDSCHGRGFPADAKTKICSTCRGIGRVTIPP------FTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV  304 (416)
Q Consensus       231 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~------~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~  304 (416)
                      .|..|+|+|++.+....+|+.|+|+|++.+..      ++++|+.|+|+|++++++|.+|+|.|++...++|+|+||+|+
T Consensus       144 ~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~i~~pC~~C~G~G~v~~~~~i~V~IPaGv  223 (371)
T COG0484         144 TCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGV  223 (371)
T ss_pred             ECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeECCCCCCCCCCCCeEeeeeEEEEECCCCC
Confidence            99999999999999999999999999875432      478999999999999999999999999999999999999999


Q ss_pred             cCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCC
Q 014884          305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPG  384 (416)
Q Consensus       305 ~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g  384 (416)
                      .+|++|++.|+|+++..|+++|||||.|.|++|+.|.|+|+||+++++|++.+|+||++++||||||.++|+||+|+++|
T Consensus       224 ~~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~~~l~ip~Gtq~G  303 (371)
T COG0484         224 DDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGRVKLKIPAGTQTG  303 (371)
T ss_pred             ccCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCCEEEecCCCCccC
Confidence            99999999999999988999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       385 ~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      +++||+|+|||.... ..+|||||+|+|++|+
T Consensus       304 ~~~rl~gkG~p~~~~-~~~GDl~v~v~v~~P~  334 (371)
T COG0484         304 EVFRLRGKGMPKLRS-GGRGDLYVRVKVETPK  334 (371)
T ss_pred             cEEEEcCCCccccCC-CCcCCEEEEEEEEcCC
Confidence            999999999997633 2469999999999995

>PRK14296 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.7e-78  Score=600.62  Aligned_cols=325  Identities=33%  Similarity=0.646  Sum_probs=280.9

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~  160 (416)
                      ..|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.||++||++|+.+.....   +
T Consensus         3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~-~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~---~   78 (372)
T PRK14296          3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNK-SPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSS---G   78 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCC---C
Confidence            479999999999999999999999999999999997 478999999999999999999999999999876543110   0


Q ss_pred             CCCCCccCCCCCCceecccc----ccccchhhhhhhhhcCC-----CcccCCCeEEEEEeeeeecccCcceeeeeeeeee
Q 014884          161 DAEGFRYAGDAEGFRYAYQT----HFSDSFHKIFSEIFEDE-----TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP  231 (416)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~----~f~~~~~~~F~~~f~~~-----~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~  231 (416)
                      ...+|      .+|+.+|..    .| +.|.++|+.+|++.     ...+++|+++.|.|||+|+|+|+++.+.+.+.+.
T Consensus        79 ~~~~~------~~~~~~~~~~~~~g~-~~f~d~f~~~fggg~~~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~  151 (372)
T PRK14296         79 FSSNF------GDFEDLFSNMGSSGF-SSFTNIFSDFFGSNKSDYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTN  151 (372)
T ss_pred             cCcCC------Ccccccccccccccc-ccchhhhhhhcCCCccCCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEeeeec
Confidence            00011      112221211    11 23557777777631     2346889999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccc
Q 014884          232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG  303 (416)
Q Consensus       232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G  303 (416)
                      |+.|+|+|........+|+.|+|+|.++..        +++++|+.|+|.|++++++|..|+|.|++.+.++++|.||||
T Consensus       152 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G  231 (372)
T PRK14296        152 CSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKG  231 (372)
T ss_pred             cCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeecccccCCCCceEEEEEEEEEEEECCC
Confidence            999999999888888999999999987532        135799999999999999999999999999999999999999


Q ss_pred             ccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCC-CCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCC
Q 014884          304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRD-GADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQ  382 (416)
Q Consensus       304 ~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~-G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~  382 (416)
                      +++|++|+|+|+|++...+..+|||+|+|+++||+.|+|+ |+||+++++|+|.|||+|+++.|+||||++.|+||++++
T Consensus       232 ~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~t~  311 (372)
T PRK14296        232 IRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTLDGDIKYKLPKSIN  311 (372)
T ss_pred             CCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCCCCCEEEEECCccC
Confidence            9999999999999987667789999999999999999995 899999999999999999999999999999999999999


Q ss_pred             CCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          383 PGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       383 ~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      ||++++|+|+|||.....+.+|||||+|+|+||+
T Consensus       312 ~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~  345 (372)
T PRK14296        312 SNELIIINNKGLYKSINKDKRGDLIIKVNIVVPK  345 (372)
T ss_pred             CCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCC
Confidence            9999999999999653334579999999999995

>PRK14288 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=9.7e-77  Score=590.37  Aligned_cols=316  Identities=32%  Similarity=0.636  Sum_probs=276.1

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~  160 (416)
                      ..|||+||||+++||.+|||+|||+||++||||+++.+++|+++|++|++||+||+||.+|++||++|+.+....   .+
T Consensus         2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~---~~   78 (369)
T PRK14288          2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQA---GA   78 (369)
T ss_pred             CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccC---CC
Confidence            469999999999999999999999999999999998778899999999999999999999999999987654210   00


Q ss_pred             CCCCCccCCCCCCceeccccccccchhhhhhhhhcCC-------CcccCCCeEEEEEeeeeecccCcceeeeeeeeeecC
Q 014884          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD  233 (416)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~-------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~  233 (416)
                               +...|.++|     +.|.++|+.+|+..       ...+++|+++.|.|||+|+|+|+++++.+++.+.|+
T Consensus        79 ---------~~~~~~~~f-----~~~~~~F~~~fg~g~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~  144 (369)
T PRK14288         79 ---------SQSDFSDFF-----EDLGSFFEDAFGFGARGSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCE  144 (369)
T ss_pred             ---------Cccccccch-----hhHHHHHHhhcCCCCcccCcCCCCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCC
Confidence                     001122222     12345555555421       124688999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccCCCE
Q 014884          234 SCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT  309 (416)
Q Consensus       234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~  309 (416)
                      .|+|+|.... ...+|+.|+|+|.++..    .++++|+.|.|+|+++.++|..|+|.|++.+.++++|.||||+++|++
T Consensus       145 ~C~G~G~~~~-~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~  223 (369)
T PRK14288        145 SCDGTGAKDK-ALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNR  223 (369)
T ss_pred             CCCCcccCCC-CCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEccccCccCCCcceEEEEEEEEEecCCCCCCCCE
Confidence            9999999765 67899999999987543    246799999999999999999999999999999999999999999999


Q ss_pred             EEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCe-EEEEeCCCCCCCcEEE
Q 014884          310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLV  388 (416)
Q Consensus       310 i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~-~~v~ip~g~~~g~~~~  388 (416)
                      |+|+|+|++.+ ++.+|||+|+|+|++|+.|+|+|+||+++++|+|.|||+|+++.|+||||+ +.|+||++++||++++
T Consensus       224 i~l~g~G~~~~-~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~  302 (369)
T PRK14288        224 MVLKNKGNEYE-KGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFA  302 (369)
T ss_pred             EEEccCccCCC-CCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEE
Confidence            99999999865 568999999999999999999999999999999999999999999999996 8999999999999999


Q ss_pred             EcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          389 LRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       389 l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      |+|+|||..+. ..+|||||+|+|.||+
T Consensus       303 i~g~G~p~~~~-~~~GDL~v~~~v~~P~  329 (369)
T PRK14288        303 FRNEGVKHPES-SYRGSLIVELQVIYPK  329 (369)
T ss_pred             EcCCCCCCCCC-CCCCCEEEEEEEECCC
Confidence            99999997653 3579999999999995

>PRK14279 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.8e-76  Score=590.94  Aligned_cols=335  Identities=36%  Similarity=0.687  Sum_probs=285.8

Q ss_pred             CcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCcc-c-
Q 014884           80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEK-Y-  157 (416)
Q Consensus        80 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~-~-  157 (416)
                      +.+|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.||++||++|+.+..... . 
T Consensus         7 ~~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~~   86 (392)
T PRK14279          7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGGR   86 (392)
T ss_pred             cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhccccccccc
Confidence            45799999999999999999999999999999999987788999999999999999999999999999764221110 0 


Q ss_pred             ---cCCCCCCCccCC--CCCCceecccccc---ccchhhhhhhhhcCC-------CcccCCCeEEEEEeeeeecccCcce
Q 014884          158 ---SAGDAEGFRYAG--DAEGFRYAYQTHF---SDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTK  222 (416)
Q Consensus       158 ---~~~~~~~~~~~~--~~~~f~~~~~~~f---~~~~~~~F~~~f~~~-------~~~~g~di~~~l~isl~e~~~G~~~  222 (416)
                         +.+.+.+|.+..  ....|.++|+..+   .++|.++|+.+|++.       ...+++|++++|.|||+|+|+|+++
T Consensus        87 ~~~~~~~~~g~~~~~~~~~~d~~~~f~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~~~~g~di~~~l~ltLee~~~G~~~  166 (392)
T PRK14279         87 RFDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTM  166 (392)
T ss_pred             cccCCCCCCCccccccccCcChhhhhcccccccccchhhhhhhhhcCCCcccccCCCCCCCCeEEEEEEEHHHHhCCeEE
Confidence               000111221100  0112334443111   123667788777631       1347889999999999999999999


Q ss_pred             eeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEE
Q 014884          223 HVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKV  298 (416)
Q Consensus       223 ~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V  298 (416)
                      ++.+++.+.|+.|+|+|........+|+.|+|+|+++..    .++++|+.|+|+|++++++|..|+|.|++.+.++++|
T Consensus       167 ~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~g~v~~~~~~~V  246 (392)
T PRK14279        167 PLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIEDPCEECKGTGVTTRTRTINV  246 (392)
T ss_pred             EEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEecceEEEEecCCCCceeEEeCCcCCCCCCCeEEEEeeeeEE
Confidence            999999999999999999888888999999999997543    2478999999999999999999999999999999999


Q ss_pred             EecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeC
Q 014884          299 TIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIP  378 (416)
Q Consensus       299 ~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip  378 (416)
                      .||||+++|++|+|+|+|++.+.+..+|||+|+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+|+||++.|+||
T Consensus       247 ~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~i~v~Ip  326 (392)
T PRK14279        247 RIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPVGVKVP  326 (392)
T ss_pred             EeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCceEEEEEC
Confidence            99999999999999999999877778899999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          379 KGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       379 ~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      +++++|++++|+|+|||..+  ..+|||||+|+|.||+
T Consensus       327 ~g~~~g~~iri~g~G~p~~~--~~~GDL~I~~~v~~P~  362 (392)
T PRK14279        327 AGTADGRILRVRGRGVPKRS--GGAGDLLVTVKVAVPP  362 (392)
T ss_pred             CCCCCCCEEEECCCCCCCCC--CCCCCEEEEEEEECCC
Confidence            99999999999999999753  3479999999999995

>PRK14286 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.6e-75  Score=582.12  Aligned_cols=323  Identities=33%  Similarity=0.694  Sum_probs=280.9

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~  160 (416)
                      ..|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|++||++|+.+..... ++.
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~-~~~   81 (372)
T PRK14286          3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGA-GGF   81 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhcccc-CCC
Confidence            4699999999999999999999999999999999987788999999999999999999999999999876543110 000


Q ss_pred             CCCCCccCCCCCCceeccccccccchhhhhhhhhcCC-----------CcccCCCeEEEEEeeeeecccCcceeeeeeee
Q 014884          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-----------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAF  229 (416)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~-----------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~  229 (416)
                      ...++      ..|..+|     +.|.++|+.+|++.           ...+++|++++|.|||+|+|+|+++++.+++.
T Consensus        82 ~~~~~------~~~~~~~-----~~~~d~f~~ffgg~~~~~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~  150 (372)
T PRK14286         82 GQGAY------TDFSDIF-----GDFGDIFGDFFGGGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRL  150 (372)
T ss_pred             CCCCc------ccccccc-----cchhhHHHHhhCCCccCCCcccccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeecc
Confidence            00000      0111111     23456677666521           13468899999999999999999999999999


Q ss_pred             eecCCCCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccccc
Q 014884          230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD  305 (416)
Q Consensus       230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~  305 (416)
                      +.|+.|+|+|........+|+.|+|+|+++..    .++++|+.|+|+|++++++|..|+|.|++.+.++++|.||||++
T Consensus       151 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~  230 (372)
T PRK14286        151 ESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVE  230 (372)
T ss_pred             ccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEecccCCCCCCCcEEecceEEEEEECCCCC
Confidence            99999999999888888899999999987543    24679999999999999999999999999999999999999999


Q ss_pred             CCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCe-EEEEeCCCCCCC
Q 014884          306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPG  384 (416)
Q Consensus       306 ~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~-~~v~ip~g~~~g  384 (416)
                      +|++|+|+|+|++.+.+..+|||||+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+||||+ +.|+||+++++|
T Consensus       231 ~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i~v~ip~g~~~g  310 (372)
T PRK14286        231 TGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMKIPEGTESG  310 (372)
T ss_pred             CCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEEEEEeCCccCCC
Confidence            9999999999999876677899999999999999999999999999999999999999999999997 899999999999


Q ss_pred             cEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       385 ~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      ++++|+|+|||..+. ..+|||||+|+|.||+
T Consensus       311 ~~~ri~G~G~P~~~~-~~~GDL~V~~~V~~P~  341 (372)
T PRK14286        311 QVFRLKGHGMPYLGA-YGKGDQHVIVKIEIPK  341 (372)
T ss_pred             cEEEECCCCCCCCCC-CCCCcEEEEEEEECCC
Confidence            999999999997643 3579999999999995

>PRK14298 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=8.3e-75  Score=577.55  Aligned_cols=318  Identities=42%  Similarity=0.732  Sum_probs=278.4

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~  160 (416)
                      ..|||+||||+++||.+|||+|||+||++||||+++ +++|+++|++|++||+||+||.+|+.||++|+.+.... ++  
T Consensus         4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~-~~--   79 (377)
T PRK14298          4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNK-EPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQ-YS--   79 (377)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccC-ChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccc-cC--
Confidence            469999999999999999999999999999999997 47789999999999999999999999999987654311 00  


Q ss_pred             CCCCCccCCCCCCceeccccccccchhhhhhhhhcCC------CcccCCCeEEEEEeeeeecccCcceeeeeeeeeecCC
Q 014884          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS  234 (416)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~  234 (416)
                      ...+|.  +  ..|         ++|.++|+.+|++.      ...++.|++++|.|||+|+|+|+++++.+++.+.|+.
T Consensus        80 ~~~~~~--~--~~~---------~~~~d~f~~~Fgg~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~  146 (377)
T PRK14298         80 AEDIFR--G--ADF---------GGFGDIFEMFFGGGGRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCST  146 (377)
T ss_pred             cccccc--c--CCc---------CcchhhhHhhhcCCCccCCCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCC
Confidence            000010  0  011         12345666666531      2357889999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccC
Q 014884          235 CHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDS  306 (416)
Q Consensus       235 C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~  306 (416)
                      |+|+|........+|+.|+|+|+++..        .++.+|+.|+|+|++++++|..|+|.|++.+.++++|.||||+++
T Consensus       147 C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~  226 (377)
T PRK14298        147 CSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADS  226 (377)
T ss_pred             CCCCcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccCCCCCCCCCccEEEEEEEEEecCCCCCCC
Confidence            999999988888999999999987532        246799999999999999999999999999999999999999999


Q ss_pred             CCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCcE
Q 014884          307 GDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQL  386 (416)
Q Consensus       307 G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~~  386 (416)
                      |++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+||||++.|+||+++++|++
T Consensus       227 G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~  306 (377)
T PRK14298        227 GLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGKVKMNIPPGTQTHSV  306 (377)
T ss_pred             CCEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCCEEEEeCCCcccCCE
Confidence            99999999999977778899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          387 LVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       387 ~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      ++|+|+|||..+. ..+|||||+|+|.||+
T Consensus       307 lri~g~G~p~~~~-~~~GDL~V~~~V~~P~  335 (377)
T PRK14298        307 FRLKDKGMPRLHG-HGKGDQLVKVIVKTPT  335 (377)
T ss_pred             EEECCCCCCCCCC-CCCCCEEEEEEEECCC
Confidence            9999999997643 3579999999999995

>PRK14284 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.8e-74  Score=578.69  Aligned_cols=332  Identities=36%  Similarity=0.678  Sum_probs=280.2

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCCC
Q 014884           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD  161 (416)
Q Consensus        82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~~  161 (416)
                      .|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||++|+||.+|+.||++|..+......+. .
T Consensus         1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~-~   79 (391)
T PRK14284          1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGF-G   79 (391)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCc-C
Confidence            389999999999999999999999999999999998888999999999999999999999999999876532110000 0


Q ss_pred             CCCCcc-CCCCCCceeccccccccchhhhhhhhhcC-----------CCcccCCCeEEEEEeeeeecccCcceeeeeeee
Q 014884          162 AEGFRY-AGDAEGFRYAYQTHFSDSFHKIFSEIFED-----------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAF  229 (416)
Q Consensus       162 ~~~~~~-~~~~~~f~~~~~~~f~~~~~~~F~~~f~~-----------~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~  229 (416)
                      ..+|.. ......|..+|+..|+ .+.++|+.+|++           ....++.|+++.|.|||+|+|+|+++++.+++.
T Consensus        80 ~~g~~~~~~~~~~~~~~f~~~~~-~~~d~f~~~fgg~g~~~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~  158 (391)
T PRK14284         80 GAGMGNMEDALRTFMGAFGGEFG-GGGSFFEGLFGGLGEAFGMRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGY  158 (391)
T ss_pred             CCCcCcccchhhhcccccccccc-ccccchhhhccCccccccccccCCCcCCCCCeEEEEEEEHHHHhCCeeEEEEEeee
Confidence            011110 0011122222221111 113556555542           112468899999999999999999999999999


Q ss_pred             eecCCCCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccccc
Q 014884          230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD  305 (416)
Q Consensus       230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~  305 (416)
                      +.|+.|+|+|........+|+.|+|+|.++..    .++.+|+.|+|.|++++++|..|+|.|++.+.++++|.||||+.
T Consensus       159 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~  238 (391)
T PRK14284        159 KSCDACSGSGANSSQGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIPAGVD  238 (391)
T ss_pred             ccCCCCcccccCCCCCCeecCccCCeeEEEEEeceEEEEEECCCCCCCCcccCCcCCCCCCcceecceEEEEEEECCCCC
Confidence            99999999999888888999999999987543    24679999999999999999999999999999999999999999


Q ss_pred             CCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCC--CeEEEEeCCCCCC
Q 014884          306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLS--GKVQVKIPKGVQP  383 (416)
Q Consensus       306 ~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ld--g~~~v~ip~g~~~  383 (416)
                      +|++|+|+|+|++++.++.||||||+|+++||+.|+|+|+||+++++|+|.+|++|++++|+|+|  +.++|+||+++++
T Consensus       239 ~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i~v~Ip~g~~~  318 (391)
T PRK14284        239 SGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCRLTIPEGIQS  318 (391)
T ss_pred             CCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEEEEEECCccCC
Confidence            99999999999998878889999999999999999999999999999999999999999999999  5689999999999


Q ss_pred             CcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          384 GQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       384 g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      |++++|+|+|||..+. ..+|||||+|+|.+|+
T Consensus       319 g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~  350 (391)
T PRK14284        319 GTILKVRGQGFPNVHG-KGRGDLLVRISVETPQ  350 (391)
T ss_pred             CeEEEECCCCCCCCCC-CCCCcEEEEEEEECCC
Confidence            9999999999997643 2579999999999995

>PRK14277 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.5e-74  Score=576.76  Aligned_cols=330  Identities=41%  Similarity=0.771  Sum_probs=278.4

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~  160 (416)
                      ..|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|++||++|+.+......+.+
T Consensus         4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~   83 (386)
T PRK14277          4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQG   83 (386)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhccccccccccccC
Confidence            46999999999999999999999999999999999877889999999999999999999999999998766432111110


Q ss_pred             CC--CCCccCCCCCCceeccccccccchhhhhhhhhcCC------CcccCCCeEEEEEeeeeecccCcceeeeeeeeeec
Q 014884          161 DA--EGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC  232 (416)
Q Consensus       161 ~~--~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C  232 (416)
                      ..  .++.    ...|...+ ..|.+.|.++|+.+|++.      ...+++|+++.|.|||+|+|+|+++++.+++.+.|
T Consensus        84 ~~~~~g~~----~~~~~~~~-~~~~d~f~~~F~~~fgg~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C  158 (386)
T PRK14277         84 GFGQGGFG----GGGFDFDF-GGFGDIFEDIFGDFFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKC  158 (386)
T ss_pred             CcCCCCcc----ccCccccc-cchhHHHHHhhcccccCCCcCCCCCCCCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccC
Confidence            00  0110    00011000 011122333444333321      13478899999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccc
Q 014884          233 DSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV  304 (416)
Q Consensus       233 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~  304 (416)
                      +.|+|+|........+|+.|+|.|+++..        ...++|+.|+|+|++++++|..|+|.|++.+.++++|.||||+
T Consensus       159 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~  238 (386)
T PRK14277        159 DVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGI  238 (386)
T ss_pred             CCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeeccCCCCCCCCCcEEeeeeEEEEecCCCc
Confidence            99999999888888999999999987532        1256999999999999999999999999999999999999999


Q ss_pred             cCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCC
Q 014884          305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPG  384 (416)
Q Consensus       305 ~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g  384 (416)
                      ++|++|+|+|+|++...+..+|||+|+|+|+||+.|+|+|+||+++++|+|.||++|+++.|+||||++.|+||+++++|
T Consensus       239 ~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g  318 (386)
T PRK14277        239 DDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGKVKFTIPEGTQTG  318 (386)
T ss_pred             cCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCCEEEEECCCCCCC
Confidence            99999999999998766677899999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       385 ~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      ++++|+|+|||..+. ..+|||||+|+|.||+
T Consensus       319 ~~~ri~g~G~p~~~~-~~~GDL~v~~~V~~P~  349 (386)
T PRK14277        319 TKFRLRGKGIPHLRG-RGRGDQIVKVYIEVPK  349 (386)
T ss_pred             CEEEECCCCCCCCCC-CCCCCEEEEEEEEeCC
Confidence            999999999997643 2579999999999995

>PRK14285 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.2e-74  Score=571.49  Aligned_cols=324  Identities=35%  Similarity=0.678  Sum_probs=282.3

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~  160 (416)
                      ..|||++|||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||++++.+....    .
T Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~----~   77 (365)
T PRK14285          2 KRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGG----G   77 (365)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccC----C
Confidence            369999999999999999999999999999999998878899999999999999999999999999987654211    0


Q ss_pred             CCCCCccCCCCCCceeccccccccchhhhhhhhhcCC-------CcccCCCeEEEEEeeeeecccCcceeeeeeeeeecC
Q 014884          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD  233 (416)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~-------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~  233 (416)
                      .+.++.  ++.++|...    | ..|+++|+.+|++.       ...+++|++++|.|||+|+|+|+++++.+++.+.|.
T Consensus        78 ~~~~~~--~g~~~~~~~----~-~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~  150 (365)
T PRK14285         78 GFEGFS--GGFSGFSDI----F-EDFGDIFDSFFTGNRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCE  150 (365)
T ss_pred             CccccC--CCccccccc----c-ccHHHHHHHhhcCCcCCCCCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCC
Confidence            010110  000111111    1 23567777777631       134788999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccCCCE
Q 014884          234 SCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT  309 (416)
Q Consensus       234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~  309 (416)
                      .|+|+|.........|+.|+|+|+++..    .++++|+.|+|.|++++++|..|+|.|++.+.++++|.||||+++|++
T Consensus       151 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~  230 (365)
T PRK14285        151 SCLGKKSEKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQ  230 (365)
T ss_pred             CCCCcccCCCCCCccCCCccCceeEEecCceeEEeeecCCCCCcccccCCCCCCCCCCCEEeccEEEEEEECCCCCCCCE
Confidence            9999999888888899999999987653    247899999999999999999999999999999999999999999999


Q ss_pred             EEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCe-EEEEeCCCCCCCcEEE
Q 014884          310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLV  388 (416)
Q Consensus       310 i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~-~~v~ip~g~~~g~~~~  388 (416)
                      |+|+|+|++.+.+..+|||||+|++++|+.|+|+|+||+++++|+|.+||+|+++.|+||||+ ++|+||+++++|++++
T Consensus       231 i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~v~V~Ip~g~~~g~~ir  310 (365)
T PRK14285        231 IKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPKGTENDEQII  310 (365)
T ss_pred             EEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCEEEEEeCCCcCCCcEEE
Confidence            999999999876777899999999999999999999999999999999999999999999995 8999999999999999


Q ss_pred             EcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          389 LRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       389 l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      |+|+|||..+. ..+|||||+|+|.+|+
T Consensus       311 l~GkG~p~~~~-~~~GDL~V~~~v~~P~  337 (365)
T PRK14285        311 IKNEGMPILHT-EKFGNLILIIKIKTPK  337 (365)
T ss_pred             ECCCCccCCCC-CCCCCEEEEEEEECCC
Confidence            99999997643 2469999999999994

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=100.00  E-value=1.6e-74  Score=579.75  Aligned_cols=309  Identities=30%  Similarity=0.537  Sum_probs=269.1

Q ss_pred             CCCCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCc
Q 014884           76 SCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENE  155 (416)
Q Consensus        76 ~~~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~  155 (416)
                      +..+...|||+||||+++||.+|||+|||+||++||||++++    .++|++|++||+||+||.+|+.||++|..+....
T Consensus        22 ~~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~----~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~   97 (421)
T PTZ00037         22 KREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGG   97 (421)
T ss_pred             cccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch----HHHHHHHHHHHHHhccHHHHHHHhhhcchhcccC
Confidence            344556899999999999999999999999999999999863    4899999999999999999999999976543210


Q ss_pred             cccCCCCCCCccCCCCCCceeccccccccchhhhhhhhhcC----CCcccCCCeEEEEEeeeeecccCcceeeeeeeeee
Q 014884          156 KYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED----ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP  231 (416)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~----~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~  231 (416)
                               .   +.             ..+.++|+.+|++    ....+++|+.+.|.|||+|+|+|+++.+.+++.+.
T Consensus        98 ---------~---~~-------------~d~~d~f~~~Fggg~~~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~  152 (421)
T PTZ00037         98 ---------E---QP-------------ADASDLFDLIFGGGRKPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVI  152 (421)
T ss_pred             ---------C---CC-------------cchhhhHHHhhccccccccccCCCCEEEEeeeeHHHHhCCCceEEEeecccc
Confidence                     0   00             0122444444442    12356899999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEee--eeeeEeeCCcEEeceEEEEEEec
Q 014884          232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIK--DHCMTCKGSGVVDGVKEVKVTIP  301 (416)
Q Consensus       232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~--~~C~~C~g~G~~~~~~~l~V~Ip  301 (416)
                      |+.|+|+|.... ...+|+.|+|+|+++..        .++.+|+.|+|+|+++.  ++|..|+|.|++.+.++++|.||
T Consensus       153 C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~~~~~l~V~Ip  231 (421)
T PTZ00037        153 CANCEGHGGPKD-AFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNID  231 (421)
T ss_pred             ccccCCCCCCCC-CCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceeccccccCCcCCCcceeeeeeEEEEeeC
Confidence            999999998544 57899999999975321        23679999999999985  89999999999999999999999


Q ss_pred             ccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCe-EEEEeCCC
Q 014884          302 AGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG  380 (416)
Q Consensus       302 ~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~-~~v~ip~g  380 (416)
                      ||+.+|++|+|+|+|+..+ ++.||||||+|+++||+.|+|+|+||+++++|+|.+||+|+++.|+||||+ +.|+||++
T Consensus       232 ~G~~dG~~I~~~G~Gd~~~-~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g  310 (421)
T PTZ00037        232 KGVPNQHKITFHGEADEKP-NEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPG  310 (421)
T ss_pred             CCCCCCcEEEEecccCCCC-CCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCC
Confidence            9999999999999999865 578999999999999999999999999999999999999999999999997 89999988


Q ss_pred             --CCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcC
Q 014884          381 --VQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP  415 (416)
Q Consensus       381 --~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P  415 (416)
                        ++||++++|+|+|||..+.+..+|||||+|+|.||
T Consensus       311 ~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P  347 (421)
T PTZ00037        311 EVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFP  347 (421)
T ss_pred             cccCCCcEEEeCCCCcccCCCCCCCCCEEEEEEEEcC
Confidence              99999999999999976543468999999999999

>PRK14295 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.4e-74  Score=573.93  Aligned_cols=333  Identities=36%  Similarity=0.709  Sum_probs=282.1

Q ss_pred             CcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcc----cccCCCCCc
Q 014884           80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDR----RRSRGSENE  155 (416)
Q Consensus        80 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~----~~~~g~~~~  155 (416)
                      +..|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|++||+    +|+.|....
T Consensus         7 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~~   86 (389)
T PRK14295          7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRPG   86 (389)
T ss_pred             cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccccC
Confidence            4579999999999999999999999999999999998778899999999999999999999999999    776554311


Q ss_pred             cccCCCCCCCccCCCCCCceeccc----cccccchhhhhhhhhcC----CCcccCCCeEEEEEeeeeecccCcceeeeee
Q 014884          156 KYSAGDAEGFRYAGDAEGFRYAYQ----THFSDSFHKIFSEIFED----ETSHFAPDIQVELVLSFAEAAKGCTKHVSFD  227 (416)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~f~~~~~----~~f~~~~~~~F~~~f~~----~~~~~g~di~~~l~isl~e~~~G~~~~~~~~  227 (416)
                      . ..+...+|.+ +..+.|..+++    ..|++.|.++|+.+|++    ....+++|++++|.|||+|+|+|+++++.++
T Consensus        87 ~-~~~~~~~~~~-~~~~~f~~~~~~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~g~di~~~l~lsLee~~~G~~k~i~~~  164 (389)
T PRK14295         87 P-GGGGGGGFNF-DLGDLFGGGAQGGGGAGGGGGLGDVFGGLFNRGGRRTQPRRGADVESEVTLSFTEAIDGATVPLRLT  164 (389)
T ss_pred             C-CCCCCCCCCc-ccccccccccccccccccccchhhhhcccccCCCCCCCCCCCCCEEEEEEEEHHHHhCCceEEEEee
Confidence            0 0000011110 00111211100    01222355667766653    1235789999999999999999999999999


Q ss_pred             eeeecCCCCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccc
Q 014884          228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG  303 (416)
Q Consensus       228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G  303 (416)
                      +.+.|+.|+|+|........+|+.|+|+|++...    .++.+|+.|+|+|++++.+|..|.|.|++.+.++++|.||||
T Consensus       165 r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G  244 (389)
T PRK14295        165 SQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIPAG  244 (389)
T ss_pred             ccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceEEEEecCCCcceeEEeccCCCCCCCCceEeeeeEEEEEeCCC
Confidence            9999999999999988888999999999987543    246799999999999999999999999999999999999999


Q ss_pred             ccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCC-eEEEEeCCCCC
Q 014884          304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQ  382 (416)
Q Consensus       304 ~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg-~~~v~ip~g~~  382 (416)
                      +++|++|+|+|+|++...+..+|||+|+|+++||+.|+|+|+||+++++|+|.+|++|++++|+|+|| .+.|+||++++
T Consensus       245 ~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~~~v~ip~g~~  324 (389)
T PRK14295        245 VSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPVTVKLPPGTP  324 (389)
T ss_pred             CCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCEEEEEECCccC
Confidence            99999999999999877777899999999999999999999999999999999999999999999999 58999999999


Q ss_pred             CCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          383 PGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       383 ~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      +|++++|+|+|||..+  +.+|||||+|+|.||+
T Consensus       325 ~g~~iri~G~G~p~~~--~~~GDL~i~~~v~~P~  356 (389)
T PRK14295        325 NGRVLRVRGKGAVRKD--GTRGDLLVTVEVAVPK  356 (389)
T ss_pred             CCcEEEECCCCcCCCC--CCCCCEEEEEEEECCC
Confidence            9999999999999753  3479999999999995

>PRK14278 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=6.8e-74  Score=571.65  Aligned_cols=315  Identities=37%  Similarity=0.678  Sum_probs=275.0

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCCC
Q 014884           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD  161 (416)
Q Consensus        82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~~  161 (416)
                      .|||+||||+++||.+|||+|||+||++||||+++ +++|+++|++|++||+||+||.+|++||++|+.+...   + ..
T Consensus         3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~-~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~---~-~~   77 (378)
T PRK14278          3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESA---G-GG   77 (378)
T ss_pred             CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCC-cHHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccc---c-CC
Confidence            69999999999999999999999999999999998 5789999999999999999999999999997542110   0 00


Q ss_pred             CCCCccCCCCCCceeccccccccchhhhhhhhhcCC--------CcccCCCeEEEEEeeeeecccCcceeeeeeeeeecC
Q 014884          162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE--------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD  233 (416)
Q Consensus       162 ~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~--------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~  233 (416)
                      ..+|.     .+|         ++|+++|+.+|++.        ...++.|+++.|.|||+|+|+|+++++.+++.+.|+
T Consensus        78 ~~g~~-----~~f---------~~~~d~f~~ffgg~g~~~~~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~  143 (378)
T PRK14278         78 GGGFG-----GGF---------GGLGDVFEAFFGGGAASRGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCD  143 (378)
T ss_pred             CCCCC-----cCc---------CchhHHHHHHhCCCCCCCCCccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCC
Confidence            00110     011         12345666666521        124688999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccccc
Q 014884          234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD  305 (416)
Q Consensus       234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~  305 (416)
                      .|+|+|........+|+.|+|+|++...        ..+++|+.|+|.|++++++|..|+|.|++.+.++++|.||||++
T Consensus       144 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~  223 (378)
T PRK14278        144 RCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVG  223 (378)
T ss_pred             CCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCccceeeCCCCCCCCCceeEecceEEEEEECCCCC
Confidence            9999999888888999999999986532        12679999999999999999999999999999999999999999


Q ss_pred             CCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecC-CCeEEEEeCCCCCCC
Q 014884          306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTL-SGKVQVKIPKGVQPG  384 (416)
Q Consensus       306 ~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~l-dg~~~v~ip~g~~~g  384 (416)
                      +|++|+|+|+|++.+.+..+|||+|+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+|| ++.+.|+||+++++|
T Consensus       224 ~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld~~~i~v~ip~g~~~g  303 (378)
T PRK14278        224 DGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPGTQPG  303 (378)
T ss_pred             CCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCCCCeEEEEeCCCcCCC
Confidence            9999999999999877778899999999999999999999999999999999999999999999 556899999999999


Q ss_pred             cEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       385 ~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      ++++|+|+|||..+. ..+|||||+|+|.||+
T Consensus       304 ~~lrl~g~G~p~~~~-~~~GDL~V~~~V~~P~  334 (378)
T PRK14278        304 SVITLRGRGMPHLRS-GGRGDLHAHVEVVVPT  334 (378)
T ss_pred             cEEEECCCCCCCCCC-CCCCCEEEEEEEEcCC
Confidence            999999999997643 3579999999999995

>PRK14301 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=6e-74  Score=571.10  Aligned_cols=320  Identities=43%  Similarity=0.777  Sum_probs=280.1

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~  160 (416)
                      ..|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||++++.|..+.    +
T Consensus         3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~----~   78 (373)
T PRK14301          3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGN----G   78 (373)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccC----C
Confidence            479999999999999999999999999999999998778899999999999999999999999999987654311    1


Q ss_pred             CCCCCccCCCCCCceeccccccccchhhhhhhhhcC--------CCcccCCCeEEEEEeeeeecccCcceeeeeeeeeec
Q 014884          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC  232 (416)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~--------~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C  232 (416)
                      .+.+|.  +..+.|         +.|.++|+.+|+.        ....+++|+++.|.|||+|+|+|+++++.+++.+.|
T Consensus        79 ~~~g~~--~~~~~~---------~~f~d~f~~~fg~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C  147 (373)
T PRK14301         79 GFGGFS--SAEDIF---------SHFSDIFGDLFGFSGGGSRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTC  147 (373)
T ss_pred             CCCCcc--cccccc---------cchHHHHHHHhhccCcccccCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccC
Confidence            111111  011111         1234556555541        123478899999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccCCC
Q 014884          233 DSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD  308 (416)
Q Consensus       233 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~  308 (416)
                      +.|+|+|........+|+.|+|+|++...    .++.+|+.|+|.|++++..|..|+|.|++.+.++++|.||||+++|+
T Consensus       148 ~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~  227 (373)
T PRK14301        148 DDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGS  227 (373)
T ss_pred             CCCCCcccCCCCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeecCCCCCCCCCCceeccceEEEEEeCCCCcCCC
Confidence            99999999888778899999999987543    24789999999999999999999999999999999999999999999


Q ss_pred             EEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCcEEE
Q 014884          309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLV  388 (416)
Q Consensus       309 ~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~~~~  388 (416)
                      +|+|+|+|++...+..+|||||+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+|+||+++|+||+++++|++++
T Consensus       228 ~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~i~v~ip~g~~~g~~~r  307 (373)
T PRK14301        228 RLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPVTLDIPKGTQSGEVFR  307 (373)
T ss_pred             EEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCccEEEEECCCcCCCcEEE
Confidence            99999999987767789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          389 LRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       389 l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      |+|+|||..+. ..+|||||+|+|.||+
T Consensus       308 i~g~G~p~~~~-~~~GDL~I~~~V~~P~  334 (373)
T PRK14301        308 LRGKGLPYLGS-SQKGDLLVEVSVVTPT  334 (373)
T ss_pred             EcCCCCCCCCC-CCCCCEEEEEEEECCC
Confidence            99999997643 3579999999999994

>PRK14282 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=7.8e-74  Score=570.43  Aligned_cols=326  Identities=37%  Similarity=0.689  Sum_probs=278.2

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA  159 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~  159 (416)
                      ..|||+||||+++||.+|||+|||+||++||||+++.+ ++|+++|++|++||+||+||.+|++||+++..+......+.
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~~   82 (369)
T PRK14282          3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQET   82 (369)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccccccccccC
Confidence            47999999999999999999999999999999999754 67899999999999999999999999999876543110000


Q ss_pred             CCCCCCccCCCCCCceeccccccccch-hhhhhhhhcC--------CCcccCCCeEEEEEeeeeecccCcceeeeeeeee
Q 014884          160 GDAEGFRYAGDAEGFRYAYQTHFSDSF-HKIFSEIFED--------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFV  230 (416)
Q Consensus       160 ~~~~~~~~~~~~~~f~~~~~~~f~~~~-~~~F~~~f~~--------~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~  230 (416)
                      ...++|        |.++|. .|.+.| .++|+.+|++        ....+++|++++|.|||+|+|+|+++++.+++.+
T Consensus        83 ~~~g~~--------~~~~~~-~~~~~~~~d~f~~~fgg~~~~~~~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~r~~  153 (369)
T PRK14282         83 ESGGGF--------FEDIFK-DFENIFNRDIFDIFFGERRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYE  153 (369)
T ss_pred             CCCCcc--------cccccc-cccccccchhhhHhhcccCCcccccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEeeecc
Confidence            000010        111111 111111 2556666652        1134688999999999999999999999999999


Q ss_pred             ecCCCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecc
Q 014884          231 PCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPA  302 (416)
Q Consensus       231 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~  302 (416)
                      .|+.|+|+|........+|+.|+|+|++...        .++++|+.|+|+|+++++.|..|+|.|++.+.++++|.|||
T Consensus       154 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~  233 (369)
T PRK14282        154 TCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPA  233 (369)
T ss_pred             cCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCCCCCCCCCCceeEEEEEEEEEEeCC
Confidence            9999999999888888999999999987532        13679999999999999999999999999999999999999


Q ss_pred             cccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCe-EEEEeCCCC
Q 014884          303 GVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGV  381 (416)
Q Consensus       303 G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~-~~v~ip~g~  381 (416)
                      |+.+|++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||+++++|+|.||++|+++.|+|+||+ ++|+||+++
T Consensus       234 G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~i~v~Ip~g~  313 (369)
T PRK14282        234 GVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPGT  313 (369)
T ss_pred             CCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCCCCcEEEEEeCCCc
Confidence            9999999999999999777788999999999999999999999999999999999999999999999996 899999999


Q ss_pred             CCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          382 QPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       382 ~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      ++|++++|+|+|||..+. ..+|||||+|+|.+|+
T Consensus       314 ~~g~~iri~GkG~p~~~~-~~~GDL~V~~~v~~P~  347 (369)
T PRK14282        314 QPETVFRLKGKGLPNMRY-GRRGDLIVNVHVEIPK  347 (369)
T ss_pred             CCCCEEEECCCCCCCCCC-CCCCCEEEEEEEECCC
Confidence            999999999999997532 3479999999999994

>PRK14287 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=7e-74  Score=570.26  Aligned_cols=315  Identities=41%  Similarity=0.752  Sum_probs=276.5

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~  160 (416)
                      ..|||+||||+++||.+|||+|||+||++||||+++ +++|+++|++|++||++|+||.+|++||++|+.+..... +++
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~-~~~   80 (371)
T PRK14287          3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNK-APDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGF-GGG   80 (371)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCccccccc-CCC
Confidence            469999999999999999999999999999999997 478899999999999999999999999999876543110 000


Q ss_pred             CCCCCccCCCCCCceeccccccccchhhhhhhhhcCC-------CcccCCCeEEEEEeeeeecccCcceeeeeeeeeecC
Q 014884          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD  233 (416)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~-------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~  233 (416)
                         +      ...|.         +|.++|+.+|++.       ...+++|++++|.|||+|+|+|+++++.+.+.+.|+
T Consensus        81 ---~------~~~f~---------~~~d~f~~~fgg~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~  142 (371)
T PRK14287         81 ---G------AGDFG---------GFSDIFDMFFGGGGGRRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCG  142 (371)
T ss_pred             ---C------Ccccc---------chHHHHHhhhccccCCCCCCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCC
Confidence               0      00111         1345566666521       134789999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccccc
Q 014884          234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD  305 (416)
Q Consensus       234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~  305 (416)
                      .|+|+|........+|+.|+|+|++...        ..+.+|+.|.|+|++++..|..|.|.|++.+.++++|.||||++
T Consensus       143 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~  222 (371)
T PRK14287        143 TCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGID  222 (371)
T ss_pred             CCCCcccCCCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCccccccCCCCCCeeEEeeeEEEEEEECCcCC
Confidence            9999999887778899999999987542        13579999999999999999999999999999999999999999


Q ss_pred             CCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCc
Q 014884          306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ  385 (416)
Q Consensus       306 ~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~  385 (416)
                      +|++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||++++.|+|.+|++|++++|+|+||++.|+||+++++|+
T Consensus       223 ~G~~i~~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~  302 (371)
T PRK14287        223 HGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGKVKLKIPAGTQTGT  302 (371)
T ss_pred             CCCEEEEccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCCEEEEECCCccCCc
Confidence            99999999999997666789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       386 ~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      +++|+|+|||..+. ..+|||||+|+|.+|+
T Consensus       303 ~~ri~g~G~p~~~~-~~~GDL~V~~~v~~P~  332 (371)
T PRK14287        303 SFRLRGKGVPNVHG-RGQGDQHVQVRVVTPK  332 (371)
T ss_pred             EEEEcCCCccCCCC-CCCCCEEEEEEEEcCC
Confidence            99999999997643 2479999999999995

>PRK14276 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=6.2e-74  Score=572.80  Aligned_cols=323  Identities=41%  Similarity=0.710  Sum_probs=279.2

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~  160 (416)
                      ..|||+||||+++||.+|||+|||+||++||||+++ +++|+++|++|++||+||+||.+|++||++|+.+......+..
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~~   81 (380)
T PRK14276          3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINK-EPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGA   81 (380)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCCC
Confidence            469999999999999999999999999999999997 4778999999999999999999999999998766432100000


Q ss_pred             CCCCCccCCCCCCceeccccccccchhhhhhhhhcCC-------CcccCCCeEEEEEeeeeecccCcceeeeeeeeeecC
Q 014884          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD  233 (416)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~-------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~  233 (416)
                        .++      .+|..  .+.| +.|.++|+.+|++.       ...++.|+++.|.|||+|+|+|+++++.+.+.+.|+
T Consensus        82 --~~~------~~~~~--~~~~-~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~  150 (380)
T PRK14276         82 --GGF------GGFDG--SGGF-GGFEDIFSSFFGGGGARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCH  150 (380)
T ss_pred             --CCC------CCccc--cccc-cchhhHHHHHhCccccccCcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCC
Confidence              000      01110  0011 13556777777531       134688999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccccc
Q 014884          234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD  305 (416)
Q Consensus       234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~  305 (416)
                      .|+|+|........+|+.|+|+|.+...        ..+++|+.|+|+|++++.+|..|+|.|++.+.++++|.||||++
T Consensus       151 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~  230 (380)
T PRK14276        151 TCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVE  230 (380)
T ss_pred             CCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCccccCCCCCCCCceEEEEEEEEEEEeCCCcc
Confidence            9999999888888899999999987532        13679999999999999999999999999999999999999999


Q ss_pred             CCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCc
Q 014884          306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ  385 (416)
Q Consensus       306 ~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~  385 (416)
                      +|++|+|+|+|++...+..+|||+|+|+|+||+.|+|+|+||+++++|+|.+|++|++++|+|+||++.|+||+++++|+
T Consensus       231 ~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~i~v~ip~g~~~g~  310 (380)
T PRK14276        231 TGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGDVELKIPAGTQTGK  310 (380)
T ss_pred             CCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCcEEEEECCCCCCCC
Confidence            99999999999998766678999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       386 ~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      +++|+|+|||..+. ..+|||||+|+|.||+
T Consensus       311 ~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~  340 (380)
T PRK14276        311 KFRLRGKGAPKLRG-GGNGDQHVTVNIVTPT  340 (380)
T ss_pred             EEEECCCCcCCCCC-CCCCCEEEEEEEECCC
Confidence            99999999997643 2469999999999995

>PRK14294 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.1e-73  Score=568.66  Aligned_cols=319  Identities=41%  Similarity=0.756  Sum_probs=280.2

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~  160 (416)
                      ..|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||++|+.|....     
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~-----   77 (366)
T PRK14294          3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGT-----   77 (366)
T ss_pred             CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCC-----
Confidence            479999999999999999999999999999999998778899999999999999999999999999987654311     


Q ss_pred             CCCCCccCCCCCCceeccccccccchhhhhhhhhc-C-C-------CcccCCCeEEEEEeeeeecccCcceeeeeeeeee
Q 014884          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFE-D-E-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP  231 (416)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~-~-~-------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~  231 (416)
                      .+.++      .+|.++|     +.|.++|+++|+ + .       ...+++|++++|.|||+|+|+|+++++.+++.+.
T Consensus        78 ~~~~~------~~~~~~~-----~~~~d~f~~~fg~g~~~~~~~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~  146 (366)
T PRK14294         78 GFSGF------SGFDDIF-----SSFGDIFEDFFGFGGGRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLET  146 (366)
T ss_pred             CCCCc------Cccccch-----hhhhhhHHHhhccCCCcCCcccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeeccc
Confidence            01111      0121111     123456666665 1 1       1246889999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccCC
Q 014884          232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSG  307 (416)
Q Consensus       232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G  307 (416)
                      |+.|+|+|.........|+.|+|.|.+...    .++++|+.|+|.|+.++..|..|+|.|++.+.++++|.||||+++|
T Consensus       147 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G  226 (366)
T PRK14294        147 CEECHGSGCEPGTSPTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTG  226 (366)
T ss_pred             CCCCCCccccCCCCcccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCeecCcCCCCCCCceEeecceeEEEecCCCCcCC
Confidence            999999999887788899999999987532    2478999999999999999999999999999999999999999999


Q ss_pred             CEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCcEE
Q 014884          308 DTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLL  387 (416)
Q Consensus       308 ~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~~~  387 (416)
                      ++|+|+|+|++...+..+|||+|+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+||||++.|+||+++++|+++
T Consensus       227 ~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~i  306 (366)
T PRK14294        227 SRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIF  306 (366)
T ss_pred             cEEEEccCccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCcEEEEECCCcCCCCEE
Confidence            99999999998777778999999999999999999999999999999999999999999999999899999999999999


Q ss_pred             EEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          388 VLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       388 ~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      +|+|+|||..+. ..+|||||+|+|.+|+
T Consensus       307 ri~G~G~p~~~~-~~~GDL~V~~~v~~P~  334 (366)
T PRK14294        307 RFKGKGIPSLRG-GGRGDQIIEVEVKVPT  334 (366)
T ss_pred             EECCCCCCCCCC-CCCCCEEEEEEEECCC
Confidence            999999997643 2579999999999994

>PRK14280 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.5e-73  Score=569.30  Aligned_cols=320  Identities=43%  Similarity=0.765  Sum_probs=277.9

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~  160 (416)
                      ..|||+||||+++||.+|||+|||+||++||||+++ ++.|+++|++|++||+||+||.+|++||++|+.+..... +. 
T Consensus         3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~-~~-   79 (376)
T PRK14280          3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGF-GG-   79 (376)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCc-CC-
Confidence            369999999999999999999999999999999997 467899999999999999999999999999876543210 00 


Q ss_pred             CCCCCccCCCCCCceeccccccccchhhhhhhhhcCC-------CcccCCCeEEEEEeeeeecccCcceeeeeeeeeecC
Q 014884          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD  233 (416)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~-------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~  233 (416)
                        .++.    +.+|..    .|  +|.++|+.+|++.       ...+++|++++|.|||+|+|+|+++++.+++.+.|+
T Consensus        80 --~~~~----~~~~~~----~~--~~~d~f~~~fgg~~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~  147 (376)
T PRK14280         80 --GGFG----GGDFGG----GF--GFEDIFSSFFGGGGRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCD  147 (376)
T ss_pred             --CCCC----CCCccc----cc--cchhhHHHHhCCccccCcccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCC
Confidence              0000    001110    01  2346666666521       124788999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccccc
Q 014884          234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD  305 (416)
Q Consensus       234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~  305 (416)
                      .|+|+|........+|+.|+|+|++...        .++.+|+.|+|+|++++.+|..|+|.|++.+.++++|.||+|++
T Consensus       148 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~  227 (376)
T PRK14280        148 TCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVD  227 (376)
T ss_pred             CCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceecCCCCCCCCceEEEEEEEEEEEeCCCCc
Confidence            9999999888888999999999987532        13679999999999999999999999999999999999999999


Q ss_pred             CCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCc
Q 014884          306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ  385 (416)
Q Consensus       306 ~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~  385 (416)
                      +|++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||+++++|+|.||++|+++.|+||||++.|+||+++++|+
T Consensus       228 ~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~g~~~g~  307 (376)
T PRK14280        228 NGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGKVKLKIPAGTQTGT  307 (376)
T ss_pred             CCcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCceEEEEECCCCCCCc
Confidence            99999999999997767788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       386 ~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      +++|+|+|||..+. ..+|||||+|+|.||+
T Consensus       308 ~~~i~g~G~p~~~~-~~~GDL~v~~~v~~P~  337 (376)
T PRK14280        308 QFRLKGKGVPNVRG-YGQGDQYVVVRVVTPT  337 (376)
T ss_pred             EEEEcCCCCCCCCC-CCCCCEEEEEEEECCC
Confidence            99999999997643 2579999999999995

>PRK14297 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.3e-73  Score=570.94  Aligned_cols=323  Identities=39%  Similarity=0.753  Sum_probs=279.8

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~  160 (416)
                      ..|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|++||++|+.+.....  +.
T Consensus         3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~--~~   80 (380)
T PRK14297          3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAG--GF   80 (380)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccC--CC
Confidence            3699999999999999999999999999999999987788999999999999999999999999999876543110  00


Q ss_pred             CCCCCccCCCCCCceeccccccccchhhhhhhhhcCC---------CcccCCCeEEEEEeeeeecccCcceeeeeeeeee
Q 014884          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE---------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP  231 (416)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~---------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~  231 (416)
                      ...+|      ..|.  + ..+ .+|.++|+.+|++.         ...+++|++++|.|||+|+|+|+++++.+++.+.
T Consensus        81 ~~~~~------~~~~--~-~~~-~~~~d~f~~~fgg~~g~~~~~~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~  150 (380)
T PRK14297         81 GSGGF------GGFD--F-SDM-GGFGDIFDSFFGGGFGSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNEN  150 (380)
T ss_pred             CCCCC------CCcC--c-ccc-cchhHHHHHHhccCccccccccCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeeecc
Confidence            00011      0111  0 001 12456666666521         1246889999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccc
Q 014884          232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG  303 (416)
Q Consensus       232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G  303 (416)
                      |+.|+|+|........+|+.|+|.|+++..        .++.+|+.|+|+|.+++++|..|+|.|++.+.++++|.||||
T Consensus       151 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G  230 (380)
T PRK14297        151 CETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAG  230 (380)
T ss_pred             CCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcCCCCCCCCCCeEEEeEeEEEEEeCCC
Confidence            999999999888788899999999987532        236799999999999999999999999999999999999999


Q ss_pred             ccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCC
Q 014884          304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQP  383 (416)
Q Consensus       304 ~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~  383 (416)
                      +++|++|+|+|+|++...+..+|||||+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+|+||++.|+||+++++
T Consensus       231 ~~~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~~~v~ip~g~~~  310 (380)
T PRK14297        231 VDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGEVKYEVPAGTQP  310 (380)
T ss_pred             CCCCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCcEEEEECCCcCC
Confidence            99999999999999877677799999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          384 GQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       384 g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      |++++|+|+|||..+. ..+|||||+|+|.||+
T Consensus       311 g~~~ri~g~G~p~~~~-~~~GDL~v~~~v~~P~  342 (380)
T PRK14297        311 GTVFRLKGKGVPRVNS-TGRGNQYVTVIVDIPK  342 (380)
T ss_pred             CCEEEEcCCCcCCCCC-CCCCcEEEEEEEEcCC
Confidence            9999999999997642 3579999999999995

>PRK10767 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.1e-73  Score=568.45  Aligned_cols=320  Identities=45%  Similarity=0.838  Sum_probs=280.0

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~  160 (416)
                      ..|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||++|+||.+|+.||+++..+..... +  
T Consensus         3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~-~--   79 (371)
T PRK10767          3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGG-G--   79 (371)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCC-C--
Confidence            4699999999999999999999999999999999987788999999999999999999999999999876543210 0  


Q ss_pred             CCCCCccCCCCCCceeccccccccchhhhhhhhhcC------CCcccCCCeEEEEEeeeeecccCcceeeeeeeeeecCC
Q 014884          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS  234 (416)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~------~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~  234 (416)
                       ..++.   +..+        |.+.|.++|+.+|++      ....+++|++++|.|||+|+|+|+++++.+++.+.|+.
T Consensus        80 -~~~~~---~~~~--------~~~~f~~~f~~~fgg~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~  147 (371)
T PRK10767         80 -GGGFG---GGGG--------FGDIFGDIFGDIFGGGRGGGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDT  147 (371)
T ss_pred             -CCCCC---Cccc--------cccchhhhhhhhccCCccccCCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCC
Confidence             01110   0001        122344566666642      12357899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccCCCEE
Q 014884          235 CHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTI  310 (416)
Q Consensus       235 C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i  310 (416)
                      |+|+|.........|+.|+|+|++...    .++.+|+.|+|.|+++++.|..|+|.|++.+.++++|.||||+.+|++|
T Consensus       148 C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i  227 (371)
T PRK10767        148 CHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRI  227 (371)
T ss_pred             CCCcccCCCCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeECCCCCCCCCCCceEeeeeeEEEecCCCCCCCcEE
Confidence            999999888888899999999987543    2467999999999999999999999999999999999999999999999


Q ss_pred             EEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCcEEEEc
Q 014884          311 RVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLR  390 (416)
Q Consensus       311 ~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~~~~l~  390 (416)
                      +|+|+|++...+..+|||||+|+++||+.|+|+|+||++++.|+|.+||+|+++.|+||||.+.|+||+++++|++++|+
T Consensus       228 ~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~~~~i~  307 (371)
T PRK10767        228 RLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVKLKIPEGTQTGKLFRLR  307 (371)
T ss_pred             EEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCcEEEEeCCCCCCCCEEEEC
Confidence            99999999766778999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          391 GKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       391 g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      |+|||..+. ..+|||||+|+|.||+
T Consensus       308 g~G~p~~~~-~~~GDL~v~~~v~~P~  332 (371)
T PRK10767        308 GKGVKSVRS-GARGDLYCQVVVETPV  332 (371)
T ss_pred             CCCcCCCCC-CCCCCEEEEEEEECCC
Confidence            999997643 3579999999999995

>PRK14281 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=7.5e-73  Score=567.57  Aligned_cols=331  Identities=38%  Similarity=0.708  Sum_probs=273.8

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~  160 (416)
                      ..|||+||||+++|+.+|||+|||+||++||||+++++++|+++|++|++||++|+||.+|++||++++.+....... +
T Consensus         2 ~~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~-~   80 (397)
T PRK14281          2 KRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAAS-G   80 (397)
T ss_pred             CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhcccccc-C
Confidence            369999999999999999999999999999999998778899999999999999999999999999987654321000 0


Q ss_pred             CCCCCccCCCCCCceeccc---cccccc--hhh----hhhhhhcCC-------CcccCCCeEEEEEeeeeecccCcceee
Q 014884          161 DAEGFRYAGDAEGFRYAYQ---THFSDS--FHK----IFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHV  224 (416)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~---~~f~~~--~~~----~F~~~f~~~-------~~~~g~di~~~l~isl~e~~~G~~~~~  224 (416)
                      ...+|.  +++..|.++|.   +.|+++  +..    -|...|++.       ...+++|+++.|.|||+|+|+|+++++
T Consensus        81 ~~~~~~--~~~~~~~d~f~~f~~~Fgg~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i  158 (397)
T PRK14281         81 GGPGYG--GGGGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTL  158 (397)
T ss_pred             CCCCCC--cCCCCHHHHHHHHHHHhCCCcccccccccccccccCCCcccccccCCCCCCCEEEEEEeEHHHHhCCeEEEE
Confidence            000110  00001211111   111100  000    000011110       113688999999999999999999999


Q ss_pred             eeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEE
Q 014884          225 SFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEV  296 (416)
Q Consensus       225 ~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l  296 (416)
                      .+++.+.|+.|+|+|.... ...+|+.|+|.|+++..        ..+.+|+.|.|.|++++++|..|+|.|++...+++
T Consensus       159 ~~~r~~~C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~  237 (397)
T PRK14281        159 KIKKQVPCKECNGTGSKTG-ATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVTV  237 (397)
T ss_pred             EEEeeecCCCCCCcccCCC-CCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeCCCCCCCCCCccEecceEE
Confidence            9999999999999999775 57899999999987542        12679999999999999999999999999999999


Q ss_pred             EEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEE
Q 014884          297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVK  376 (416)
Q Consensus       297 ~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~  376 (416)
                      +|.||||+++|++|+|+|+|++.+.+..+|||||+|+++||+.|+|+|+||+++++|+|.+||+|+++.|+||||++.|+
T Consensus       238 ~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~  317 (397)
T PRK14281        238 KVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGAVKLT  317 (397)
T ss_pred             EEecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCccEEEE
Confidence            99999999999999999999998767789999999999999999999999999999999999999999999999999999


Q ss_pred             eCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          377 IPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       377 ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      ||+++++|++++|+|+|||..+. ..+|||||+|+|.||+
T Consensus       318 ip~g~~~G~~~ri~g~G~P~~~~-~~~GDL~V~~~V~~P~  356 (397)
T PRK14281        318 IPAGTQPETMLRIPGKGIGHLRG-SGRGDQYVRVNVFVPK  356 (397)
T ss_pred             eCCccCCCcEEEEcCCCCCCCCC-CCCCCEEEEEEEEcCC
Confidence            99999999999999999997542 3579999999999995

>PRK14291 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.1e-72  Score=560.01  Aligned_cols=326  Identities=39%  Similarity=0.720  Sum_probs=273.4

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~  160 (416)
                      ..|||+||||+++||.+|||+|||+||++||||++++ ++|+++|++|++||+||+||.+|++||+++..+.........
T Consensus         2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~   80 (382)
T PRK14291          2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQ   80 (382)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-ccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCccc
Confidence            4699999999999999999999999999999999975 778999999999999999999999999998765432100000


Q ss_pred             CCCCCc---cCCCCCCceeccccccccchhhhhhhhhcC-----------CCcccCCCeEEEEEeeeeecccCcceeeee
Q 014884          161 DAEGFR---YAGDAEGFRYAYQTHFSDSFHKIFSEIFED-----------ETSHFAPDIQVELVLSFAEAAKGCTKHVSF  226 (416)
Q Consensus       161 ~~~~~~---~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~-----------~~~~~g~di~~~l~isl~e~~~G~~~~~~~  226 (416)
                      ...+|.   ..+..+.|.+||+. |+      |+.+|++           ....+++|+++.|.|||+|+|+|+++++.+
T Consensus        81 ~~~~~~~~~~~~~~d~f~~~f~~-fg------~~~~fg~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~  153 (382)
T PRK14291         81 GQEGFSDFGGGNIEDILEDVFDI-FG------FGDIFGRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEV  153 (382)
T ss_pred             cccccccccCCCHHHHHHHHHHh-cc------ccccccccccccccccccccccCCCCEEEEEEEEHHHhhCCEEEEEEE
Confidence            001111   00001112222110 00      0111221           112368899999999999999999999999


Q ss_pred             eeeeecCCCCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecc
Q 014884          227 DAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPA  302 (416)
Q Consensus       227 ~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~  302 (416)
                      ++.+.|..|+|+|........+|+.|+|+|+++..    .++++|+.|+|.|. +++.|..|+|.|++.+.++++|.|||
T Consensus       154 ~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~-~~~~C~~C~G~g~v~~~~~l~V~Ip~  232 (382)
T PRK14291        154 PRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGV-LREPCSKCNGRGLVIKKETIKVRIPP  232 (382)
T ss_pred             eeeccCCCCccccCCCCCCCccCCCCCCceEEEEecceEEEEecCCCCCCceE-EccCCCCCCCCceEEeeeEEEEEeCC
Confidence            99999999999999888888999999999987543    24689999999995 78999999999999999999999999


Q ss_pred             cccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCe-EEEEeCCCC
Q 014884          303 GVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGV  381 (416)
Q Consensus       303 G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~-~~v~ip~g~  381 (416)
                      |+.+|++|+|+|+|+.+..++.+|||||+|+++||+.|+|+|+||++++.|+|.+|++|+++.|+|+||+ ++|+||+++
T Consensus       233 G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~l~V~Ip~g~  312 (382)
T PRK14291        233 GVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPGT  312 (382)
T ss_pred             CCCCCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCEEEEEECCcc
Confidence            9999999999999999877788999999999999999999999999999999999999999999999996 899999999


Q ss_pred             CCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          382 QPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       382 ~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      ++|++++|+|+|||..+. ..+|||||+|+|.||+
T Consensus       313 ~~G~~i~i~G~G~p~~~~-~~~GDL~V~~~V~~P~  346 (382)
T PRK14291        313 KEGDKIRVPGKGMPRLKG-SGYGDLVVRVHIDVPK  346 (382)
T ss_pred             CCCCEEEECCCCCCCCCC-CCCCCEEEEEEEEeCC
Confidence            999999999999997643 2579999999999994

>PRK14300 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.7e-71  Score=553.84  Aligned_cols=322  Identities=37%  Similarity=0.711  Sum_probs=276.7

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCCC
Q 014884           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD  161 (416)
Q Consensus        82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~~  161 (416)
                      .|||+||||+++||.+|||+|||+||++||||+++ ++.++++|++|++||++|+||.+|++||++|..+..... ..+.
T Consensus         3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~-~~~~   80 (372)
T PRK14300          3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTD-AKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQ-SRGG   80 (372)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhhhHhHhhHHHhcccccccccc-ccCC
Confidence            69999999999999999999999999999999987 467889999999999999999999999999876543110 0000


Q ss_pred             CCCCccCCCCCCceeccccccccchhhhhhhhhcCC-------CcccCCCeEEEEEeeeeecccCcceeeeeeeeeecCC
Q 014884          162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS  234 (416)
Q Consensus       162 ~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~-------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~  234 (416)
                      ..++      .+|.    ..|.+.|.++|+.+|++.       ...+++|+++.|.|||+|+|+|+++++.+++.+.|+.
T Consensus        81 ~g~~------~~~~----~~~~~~f~~~f~~~~gg~~~~~~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~  150 (372)
T PRK14300         81 GGNH------GGFH----PDINDIFGDFFSDFMGGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDT  150 (372)
T ss_pred             CCCC------Cccc----cchhhhHHHHHHhhcCCCCCCCCCcCCCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCC
Confidence            0000      0110    011223445555544421       1146889999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccCCCEE
Q 014884          235 CHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTI  310 (416)
Q Consensus       235 C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i  310 (416)
                      |+|+|........+|+.|+|+|.+...    .++.+|+.|.|.|++++++|..|+|.|++.+.++++|.||||+++|++|
T Consensus       151 C~G~g~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i  230 (372)
T PRK14300        151 CHGSGSEKGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRI  230 (372)
T ss_pred             CCCcccCCCCCCccCCCccCeEEEEEeeceEEEEEeCCCCCccceEeCCCCCCCCCceEEEeeEEEEEEECCCCCCCcEE
Confidence            999999888888999999999987543    2467999999999999999999999999999999999999999999999


Q ss_pred             EEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCC-eEEEEeCCCCCCCcEEEE
Q 014884          311 RVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQPGQLLVL  389 (416)
Q Consensus       311 ~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg-~~~v~ip~g~~~g~~~~l  389 (416)
                      +|+|+|++...+..+|||+|+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+|+|| .++|+||+++++|++++|
T Consensus       231 ~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri  310 (372)
T PRK14300        231 RHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRL  310 (372)
T ss_pred             EEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEEE
Confidence            9999999877777899999999999999999999999999999999999999999999998 589999999999999999


Q ss_pred             cCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          390 RGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       390 ~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      +|+|||..+. ..+|||||+|+|.||+
T Consensus       311 ~g~G~p~~~~-~~~GDL~V~~~v~~P~  336 (372)
T PRK14300        311 RSKGMSKMRS-TIRGDMLTHIHVEVPK  336 (372)
T ss_pred             CCCCCCCCCC-CCCCCEEEEEEEECCC
Confidence            9999997542 2579999999999994

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=100.00  E-value=3e-71  Score=550.35  Aligned_cols=320  Identities=44%  Similarity=0.796  Sum_probs=276.8

Q ss_pred             CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCCCC
Q 014884           83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDA  162 (416)
Q Consensus        83 ~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~~~  162 (416)
                      |||+||||+++||.+|||+|||+||++||||+++ +++|+++|++|++||++|+||.+|++||+++..+.......  ..
T Consensus         1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~--~~   77 (354)
T TIGR02349         1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGG--GG   77 (354)
T ss_pred             ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcC--CC
Confidence            7999999999999999999999999999999997 57789999999999999999999999999987654321100  00


Q ss_pred             CCCccCCCCCCceeccccccccchhhhhhhhhcC---------CCcccCCCeEEEEEeeeeecccCcceeeeeeeeeecC
Q 014884          163 EGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED---------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD  233 (416)
Q Consensus       163 ~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~---------~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~  233 (416)
                      .+|      ++|.   .+.| +.|.++|+.+|++         ....+++|++++|.|||+|+|+|+++++.+++.+.|+
T Consensus        78 ~~~------~~~~---~~~~-~~~~~~f~~~fg~~~g~~~~~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~  147 (354)
T TIGR02349        78 GGF------NGFD---IGFF-GDFGDIFGDFFGGGGGSGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCE  147 (354)
T ss_pred             CCc------CCcc---ccCc-CchhhhHHHHhccCcccCccccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCC
Confidence            011      0000   0011 1245666666652         1234788999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccccc
Q 014884          234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD  305 (416)
Q Consensus       234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~  305 (416)
                      .|+|+|.........|+.|+|.|.++..        ..+++|+.|.|+|++++.+|..|+|.|++.+.++++|.||||++
T Consensus       148 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~  227 (354)
T TIGR02349       148 TCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVD  227 (354)
T ss_pred             CCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecCCCCCCCCCCcEecccceEEEEECCCCC
Confidence            9999999887778999999999986532        13579999999999999999999999999999999999999999


Q ss_pred             CCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCc
Q 014884          306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ  385 (416)
Q Consensus       306 ~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~  385 (416)
                      +|++|+|+|+|++...+..+|||+|+|++++|+.|+|+|+||++++.|+|.|||+|+++.|+|+||.++|+||+++++|+
T Consensus       228 ~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~  307 (354)
T TIGR02349       228 TGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGDVKLKIPAGTQSGT  307 (354)
T ss_pred             CCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCceEEEEECCcccCCc
Confidence            99999999999987667789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       386 ~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      +++|+|+|||..+. ..+|||||+|+|.||+
T Consensus       308 ~~~i~g~G~p~~~~-~~~GDL~i~~~v~~P~  337 (354)
T TIGR02349       308 VFRLKGKGVPRLRG-NGRGDLLVTVKVETPK  337 (354)
T ss_pred             EEEECCCCcCCCCC-CCCCCEEEEEEEECCC
Confidence            99999999997643 2579999999999995

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14283 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.7e-71  Score=552.85  Aligned_cols=326  Identities=38%  Similarity=0.682  Sum_probs=277.7

Q ss_pred             CcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccC
Q 014884           80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA  159 (416)
Q Consensus        80 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~  159 (416)
                      ...|||++|||+++||.+|||+|||+||++||||++++ ++|+++|++|++||++|+||.+|++||++|+.|....  +.
T Consensus         3 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~--~~   79 (378)
T PRK14283          3 EKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE-EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGF--SQ   79 (378)
T ss_pred             CcCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHhchhHHHHHHhhhcccccccc--cc
Confidence            35799999999999999999999999999999999974 7899999999999999999999999999987654310  00


Q ss_pred             CCCCCCccCCCCCCceeccccccccchhhhhhhh-hcC---CCcccCCCeEEEEEeeeeecccCcceeeeeeeeeecCCC
Q 014884          160 GDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEI-FED---ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSC  235 (416)
Q Consensus       160 ~~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~-f~~---~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C  235 (416)
                      .  ..|...+..+.|..++     .+|.++|+.+ |++   ....++.|++++|.|||+|+|+|+++++.+++.+.|+.|
T Consensus        80 ~--~~~~~~~~~~~~~~~~-----~~~~~~f~~~~fgg~~~~~~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C  152 (378)
T PRK14283         80 E--DIFNNINFEDIFQGFG-----FGIGNIFDMFGFGGGSRHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVC  152 (378)
T ss_pred             c--ccccccCccccccccc-----cchhhhccccccCCCCCCCccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCC
Confidence            0  0011000011111111     1233444444 432   123578899999999999999999999999999999999


Q ss_pred             CCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccCC
Q 014884          236 HGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSG  307 (416)
Q Consensus       236 ~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G  307 (416)
                      +|+|.........|+.|+|.|.+...        ..+.+|+.|.|.|+.+++.|..|+|.|++.+.++++|.||||+++|
T Consensus       153 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G  232 (378)
T PRK14283        153 NGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETG  232 (378)
T ss_pred             CccccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceecCCCCCCCCCceeeccceeEEEEECCCCCCC
Confidence            99999888888899999999997532        1257999999999999999999999999999999999999999999


Q ss_pred             CEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCcEE
Q 014884          308 DTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLL  387 (416)
Q Consensus       308 ~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~~~  387 (416)
                      ++|+|+|+|++...+..+|||+|+|+|++|+.|+|+|+||++++.|+|.+|++|+++.|+|+||.+.|+||+++++|+++
T Consensus       233 ~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~~  312 (378)
T PRK14283        233 SRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVELKIPAGTQSGTTF  312 (378)
T ss_pred             cEEEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCceEEEEeCCCCCCCCEE
Confidence            99999999998766678999999999999999999999999999999999999999999999999899999999999999


Q ss_pred             EEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          388 VLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       388 ~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      +|+|+|||..+. ..+|||||+|+|.||+
T Consensus       313 ri~g~G~p~~~~-~~~GdL~v~~~v~~P~  340 (378)
T PRK14283        313 RLKGHGMPSLRW-SGKGNLYVKVKVVVPK  340 (378)
T ss_pred             EECCCCCCCCCC-CCCCCEEEEEEEEeCC
Confidence            999999997643 2579999999999995

>PRK14290 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.1e-70  Score=545.01  Aligned_cols=315  Identities=37%  Similarity=0.695  Sum_probs=269.1

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (416)
Q Consensus        82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~  160 (416)
                      .|||+||||+++||.+|||+|||+||++||||++++++ +|+++|++|++||++|+||.+|++||++|+.+...   +++
T Consensus         3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~---~~~   79 (365)
T PRK14290          3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGA---GGS   79 (365)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCccccc---CCC
Confidence            69999999999999999999999999999999998664 78999999999999999999999999998765421   000


Q ss_pred             CCCCCccCCCCCCceeccccccccchhhhhhhhhcC--------------CCcccCCCeEEEEEeeeeecccCcceeeee
Q 014884          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--------------ETSHFAPDIQVELVLSFAEAAKGCTKHVSF  226 (416)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~--------------~~~~~g~di~~~l~isl~e~~~G~~~~~~~  226 (416)
                         ++.+    ..|..     | +.+.++|+.+|++              ....+++|++++|.|||+|+|+|+++++.+
T Consensus        80 ---~~~~----~~~~~-----~-~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~  146 (365)
T PRK14290         80 ---NFNW----DNFTH-----F-SDINDIFNQIFGGNFGSDFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKY  146 (365)
T ss_pred             ---Cccc----ccccc-----c-cchhHHHHHHhcCccccccccccccccCCCCCCCCEEEEEEecHHHhcCCEEEEEEe
Confidence               1100    00000     0 0112233333221              011247899999999999999999999999


Q ss_pred             eeeeecCCCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEE
Q 014884          227 DAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKV  298 (416)
Q Consensus       227 ~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V  298 (416)
                      .+.+.|+.|+|+|.... ...+|+.|+|.|++++.        +...+|+.|.|.|++++.+|..|+|.|++.+.++++|
T Consensus       147 ~r~~~C~~C~G~g~~~~-~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V  225 (365)
T PRK14290        147 RRNAMCPDCSGTGAKNG-KLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISV  225 (365)
T ss_pred             eecccCCCCccccCCCC-CCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeEccCCCCCCCCceeEEEeeEEEE
Confidence            99999999999998765 67899999999986542        1257999999999999999999999999999999999


Q ss_pred             EecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeC
Q 014884          299 TIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIP  378 (416)
Q Consensus       299 ~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip  378 (416)
                      .||||+.+|++|+|+|+|+.  .++.||||||+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+|++|.++|+||
T Consensus       226 ~Ip~G~~~G~~i~~~g~G~~--~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~i~V~Ip  303 (365)
T PRK14290        226 KIPKGATDNLRLRVKGKGQS--YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKYNLKIP  303 (365)
T ss_pred             EECCCCCCCcEEEEccccCC--CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCceEEEEEC
Confidence            99999999999999999986  4678999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          379 KGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       379 ~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      +++++|++++|+|+|||..+. ..+|||||+|+|.+|+
T Consensus       304 ~g~~~g~~iri~g~G~p~~~~-~~~GDL~V~~~V~~P~  340 (365)
T PRK14290        304 EGTQPGEVLKIKGAGMPHLNG-HGSGDLLVRINVEVPK  340 (365)
T ss_pred             CccCCCcEEEECCCCCCCCCC-CCCCCEEEEEEEECCC
Confidence            999999999999999997643 2479999999999994

>PRK14289 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.4e-69  Score=543.39  Aligned_cols=332  Identities=37%  Similarity=0.647  Sum_probs=276.2

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~  160 (416)
                      ..|||++|||+++||.+|||+|||+||++||||+++++++|+++|++|++||++|+||.+|++||++++.+..... +.+
T Consensus         4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~-~~~   82 (386)
T PRK14289          4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAA-GGG   82 (386)
T ss_pred             cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCC-CCC
Confidence            5799999999999999999999999999999999988888999999999999999999999999999876543110 000


Q ss_pred             CCCCCccCCCCCCcee---ccccccccchhhh--hhhhhcCCCcccCCCeEEEEEeeeeecccCcceeeeeeeeeecCCC
Q 014884          161 DAEGFRYAGDAEGFRY---AYQTHFSDSFHKI--FSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSC  235 (416)
Q Consensus       161 ~~~~~~~~~~~~~f~~---~~~~~f~~~~~~~--F~~~f~~~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C  235 (416)
                      .+.+.. .+..+.|..   +|++.|++ +...  |..........++.|+++.|.|||+|+|+|+++++.+++.+.|+.|
T Consensus        83 ~~~~~~-~~~~~~f~~f~~~fg~~~gg-~~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C  160 (386)
T PRK14289         83 GFSGEG-MSMEDIFSMFGDIFGGHGGG-FGGFGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHC  160 (386)
T ss_pred             CCCCCC-cChhhhhHHhhhhhcccccC-cccccccccccccCCCCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCC
Confidence            110000 001111111   12111100 0000  0000000123468899999999999999999999999999999999


Q ss_pred             CCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccCC
Q 014884          236 HGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSG  307 (416)
Q Consensus       236 ~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G  307 (416)
                      +|+|.........|+.|+|.|+++..        .++.+|+.|+|.|++++..|..|.|.|++.+.++++|.||+|+++|
T Consensus       161 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G  240 (386)
T PRK14289        161 HGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEG  240 (386)
T ss_pred             CCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCC
Confidence            99999888888999999999997643        1367999999999999999999999999999999999999999999


Q ss_pred             CEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCcEE
Q 014884          308 DTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLL  387 (416)
Q Consensus       308 ~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~~~  387 (416)
                      ++|+|+|+|++...+..+|||+|+|++++|+.|+|+|+||++++.|+|.+|++|+++.|+|+||++.|+||+++++|+++
T Consensus       241 ~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~~~  320 (386)
T PRK14289        241 MQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGKAKVKIEAGTQPGKVL  320 (386)
T ss_pred             CEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCCceEEEEECCccCCCcEE
Confidence            99999999998766778999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          388 VLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       388 ~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      +|+|+|||..+. ..+|||||+|+|.||+
T Consensus       321 ri~g~G~p~~~~-~~~GDL~v~~~v~~P~  348 (386)
T PRK14289        321 RLRNKGLPSVNG-YGTGDLLVNVSVYIPE  348 (386)
T ss_pred             EECCCCcCCCCC-CCCCcEEEEEEEEeCC
Confidence            999999997543 3579999999999994

>PRK14293 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.5e-69  Score=540.47  Aligned_cols=316  Identities=39%  Similarity=0.741  Sum_probs=273.3

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~  160 (416)
                      ..|||+||||+++||.+|||+|||+||++||||+++ ++.|+++|++|++||++|+||.+|++||.++..+..+.    .
T Consensus         2 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~----~   76 (374)
T PRK14293          2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDVNK-EPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGA----A   76 (374)
T ss_pred             CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CcCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccC----C
Confidence            369999999999999999999999999999999987 46789999999999999999999999999976553210    0


Q ss_pred             CCCCCccCCCCCCceeccccccccchhhhhhhhhcC-------------CCcccCCCeEEEEEeeeeecccCcceeeeee
Q 014884          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFD  227 (416)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~-------------~~~~~g~di~~~l~isl~e~~~G~~~~~~~~  227 (416)
                      .+.++   +   .+         ++|.++|+.+|++             ....+++|++++|.|||+|+|+|+++++.++
T Consensus        77 ~~~~~---~---~~---------~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~  141 (374)
T PRK14293         77 GFPDM---G---DM---------GGFADIFETFFSGFGGAGGQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIP  141 (374)
T ss_pred             CcCCc---c---cc---------cchHHHHHHHhcccCCCCCCCccccccCccCCCCeEEEEEeeHHHHhCCceEEEEee
Confidence            00000   0   00         0122333333321             1134678999999999999999999999999


Q ss_pred             eeeecCCCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEE
Q 014884          228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVT  299 (416)
Q Consensus       228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~  299 (416)
                      +.+.|+.|+|+|.........|+.|+|.|+++..        ..+.+|+.|.|.|+.++..|..|.|.|++.+.++++|.
T Consensus       142 r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~  221 (374)
T PRK14293        142 HLETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKIN  221 (374)
T ss_pred             ccccCCCCCCcCCCCCCCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEeccCCCCCCCCcccccceEEEEE
Confidence            9999999999999888888899999999987532        12579999999999999999999999999999999999


Q ss_pred             ecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCC
Q 014884          300 IPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPK  379 (416)
Q Consensus       300 Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~  379 (416)
                      ||||+++|++|+|+|+|++...+..+|||+|+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+|+||+++|+||+
T Consensus       222 IppG~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~~~i~ip~  301 (374)
T PRK14293        222 IPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVELTIPA  301 (374)
T ss_pred             eCCCCCCCCEEEEccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCCEEEEeCC
Confidence            99999999999999999987666778999999999999999999999999999999999999999999999998999999


Q ss_pred             CCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          380 GVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       380 g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      ++++|++++|+|+|||..+..+.+|||||+|+|+||+
T Consensus       302 ~~~~g~~~ri~g~G~p~~~~~~~~GDL~v~~~v~~P~  338 (374)
T PRK14293        302 GTQPNTVLTLENKGVPRLGNPVARGDHLITVKVKIPT  338 (374)
T ss_pred             CCCCCCEEEECCCCCCCCCCCCCcCCEEEEEEEECCC
Confidence            9999999999999999765434579999999999994

>PRK14292 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=9.8e-68  Score=527.70  Aligned_cols=313  Identities=36%  Similarity=0.671  Sum_probs=269.1

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCCC
Q 014884           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD  161 (416)
Q Consensus        82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~~  161 (416)
                      .|||+||||+++||.+|||+|||+||++||||+++ +++|+++|++|++||++|+||.+|+.||++|+.+..+.  ..+ 
T Consensus         2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~-~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~--~~~-   77 (371)
T PRK14292          2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGM--PGG-   77 (371)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-ChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccc--cCC-
Confidence            59999999999999999999999999999999997 57789999999999999999999999999987652110  000 


Q ss_pred             CCCCccCCCCCCceeccccccccchhhhhhhhhcC---------CCcccCCCeEEEEEeeeeecccCcceeeeeeeeeec
Q 014884          162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED---------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC  232 (416)
Q Consensus       162 ~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~---------~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C  232 (416)
                                .+|..+   .|  ++.++|+.+|++         ....++.|+++.+.|||+|+|+|+++++.+++.+.|
T Consensus        78 ----------~~~~~~---~~--d~~d~f~~~fg~~~~~~~~~~~~~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C  142 (371)
T PRK14292         78 ----------DPFGGM---GF--DPMDIFEQLFGGAGFGGGRGRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTEC  142 (371)
T ss_pred             ----------cccCcc---CC--ChHHHHHHhhCCCCcCCCCCcccccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecC
Confidence                      011000   00  122444444442         123468899999999999999999999999999999


Q ss_pred             CCCCCCCCCCCC-cccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccc
Q 014884          233 DSCHGRGFPADA-KTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG  303 (416)
Q Consensus       233 ~~C~G~G~~~~~-~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G  303 (416)
                      +.|+|+|..... ...+|+.|+|+|++...        ..+.+|+.|+|.|..++..|..|.|.|++...++++|.||||
T Consensus       143 ~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G  222 (371)
T PRK14292        143 EHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRG  222 (371)
T ss_pred             CCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceecCCCCCCCCCceEEeecceEEEEECCC
Confidence            999999987654 37899999999987532        135799999999999999999999999999999999999999


Q ss_pred             ccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCC
Q 014884          304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQP  383 (416)
Q Consensus       304 ~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~  383 (416)
                      +.+|++|+|+|+|++.+.+ . |||||+|++++|+.|+|+|+||++++.|+|.+|++|+++.|+||||+..|+||+++++
T Consensus       223 ~~~G~~i~~~G~G~~~~~~-~-GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~~~v~ip~g~~~  300 (371)
T PRK14292        223 IDEGYRIRVAGMGNEGPGG-N-GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQVIEVKPGTQH  300 (371)
T ss_pred             CCCCcEEEEecCcCCCCCC-C-CCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCCEEEecCCCcCC
Confidence            9999999999999987544 3 9999999999999999999999999999999999999999999999888999999999


Q ss_pred             CcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          384 GQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       384 g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      |++++|+|+|||..+. ..+|||||+|+|.||+
T Consensus       301 g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~  332 (371)
T PRK14292        301 GDLHRLRGQGMPRLQG-AGTGDLIVEYEIAVPK  332 (371)
T ss_pred             CcEEEECCCCCCCCCC-CCCCCEEEEEEEECCC
Confidence            9999999999997633 2469999999999994

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=5.4e-65  Score=486.01  Aligned_cols=308  Identities=32%  Similarity=0.581  Sum_probs=268.9

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~  160 (416)
                      ...||+||||+++||.+|||+|||+||++||||||++   |.++|++|++||||||||++|++||++|+.+......+  
T Consensus         3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~---~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~--   77 (337)
T KOG0712|consen    3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD---AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGG--   77 (337)
T ss_pred             ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc---HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCC--
Confidence            4689999999999999999999999999999999986   68999999999999999999999999988776432111  


Q ss_pred             CCCCCccCCCCCCceeccccccccchhhhhhhhhcCCCcccCCCeEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCC
Q 014884          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGF  240 (416)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~  240 (416)
                        +++      ..|+.||+  |        . ..+.+...+++|+.+.+.|+|+|+|.|.++.+.++++.+|+.|+|.|.
T Consensus        78 --~g~------~~f~~~F~--~--------g-~~~~~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGg  138 (337)
T KOG0712|consen   78 --GGF------GGFSQFFG--F--------G-GNGGRGRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGG  138 (337)
T ss_pred             --CCC------ccHHHhcc--C--------C-CcCccccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCC
Confidence              010      11444443  0        0 112233456999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCCcceeEEEeC---------CCcccCCCCCCceEE--eeeeeeEeeCCcEEeceEEEEEEecccccCCCE
Q 014884          241 PADAKTKICSTCRGIGRVTIP---------PFTSTCSTCKGLGRI--IKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT  309 (416)
Q Consensus       241 ~~~~~~~~C~~C~G~G~~~~~---------~~~~~C~~C~G~G~~--~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~  309 (416)
                      ...... .|+.|.|+|..+..         .++..|..|+|.|.+  .++.|+.|.|.+++...+.++|.|++|+.++++
T Consensus       139 ksg~~~-~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~k  217 (337)
T KOG0712|consen  139 KSGSAP-KCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQK  217 (337)
T ss_pred             CCCCCC-CCCCCCCCCceeEEEeccccccccceeEeccCCCccccccccccCcccccchhhhhhheeeccccCCCcccce
Confidence            766543 89999999985421         347899999999998  579999999999999999999999999999999


Q ss_pred             EEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCe-EEEEeCCC--CCCCcE
Q 014884          310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG--VQPGQL  386 (416)
Q Consensus       310 i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~-~~v~ip~g--~~~g~~  386 (416)
                      |.+.|++++.+ +..|||++|.|..++|+.|.|.|+||++..+|+|.||++|+.+.+.|+||+ +.+.++++  +.||++
T Consensus       218 i~f~geadea~-g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~  296 (337)
T KOG0712|consen  218 ITFKGEADEAP-GTKPGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPGDT  296 (337)
T ss_pred             eeeeeeeeecC-CCcCccEEEEecccccccceecccccceeeecchhhccccceEEEEccCCceEEEecCCCceeChhHE
Confidence            99999999865 566999999999999999999999999999999999999999999999998 78888887  899999


Q ss_pred             EEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          387 LVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       387 ~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      ++|+|+|||+.+++  +|||||+|+|+||+
T Consensus       297 ~~v~~~gmp~~~~~--~g~lyi~~~v~fp~  324 (337)
T KOG0712|consen  297 KRVEGEGMPIFRNP--KGDLYIKFEVKFPK  324 (337)
T ss_pred             EeecCCCcccccCC--CCcEEEEEEEEcCC
Confidence            99999999998765  89999999999995

>PRK14299 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.5e-55  Score=425.67  Aligned_cols=253  Identities=38%  Similarity=0.664  Sum_probs=207.0

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~  160 (416)
                      ..|||+||||+++||.+|||+|||+||++||||+++ ++.++++|++|++||++|+||.+|+.||+++..+......+..
T Consensus         3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~   81 (291)
T PRK14299          3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPP   81 (291)
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCC
Confidence            479999999999999999999999999999999997 5788999999999999999999999999998764321100000


Q ss_pred             CCCCCccCCCCCCceeccccccccchhhhhhhhhcC---------------CCcccCCCeEEEEEeeeeecccCcceeee
Q 014884          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED---------------ETSHFAPDIQVELVLSFAEAAKGCTKHVS  225 (416)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~---------------~~~~~g~di~~~l~isl~e~~~G~~~~~~  225 (416)
                      ...     ++...|..+   .+ +.|+++|+.+|++               ....++.|+++++.|||+|+|.|+++.+.
T Consensus        82 ~~~-----~~~~~~~~~---~~-~~~~d~f~~~fgg~~~~~~~g~~~~~~~~~~~~g~dl~~~l~isL~ea~~G~~~~i~  152 (291)
T PRK14299         82 PGP-----PGGGDFSGF---NV-GDFSDFFQQLFGGRGGFGGFGDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVVE  152 (291)
T ss_pred             CCC-----CCCCCcccc---Cc-CCHHHHHHHHhCCCCCCCCcccccccccCCCCCCCCEEEEEEecHHHHhCCCeEEEe
Confidence            000     000011100   00 1233445444432               11346889999999999999999998875


Q ss_pred             eeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccccc
Q 014884          226 FDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD  305 (416)
Q Consensus       226 ~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~  305 (416)
                      +.                                                                 .++++|.||||++
T Consensus       153 l~-----------------------------------------------------------------g~~~~V~Ip~G~~  167 (291)
T PRK14299        153 VA-----------------------------------------------------------------GERLSVRIPPGVR  167 (291)
T ss_pred             eC-----------------------------------------------------------------CEEEEEecCCCcC
Confidence            41                                                                 1368999999999


Q ss_pred             CCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCc
Q 014884          306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ  385 (416)
Q Consensus       306 ~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~  385 (416)
                      +|++|+|+|+|++.      |||+|+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+|+||.+.|+||+++++|+
T Consensus       168 ~G~~ir~~g~G~~~------GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v~tldG~~~v~ip~~~~~g~  241 (291)
T PRK14299        168 EGQVIRLAGKGRQG------GDLYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGPVEVTIPPRTQAGR  241 (291)
T ss_pred             CCcEEEECCCCCCC------CCEEEEEEEcCCCCeEEECCEEEEEEecCHHHHhCCCEEEEECCCCCEEEEeCCCcCCCC
Confidence            99999999999863      899999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       386 ~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      +++|+|+|||..+  +.+|||||+|+|.||+
T Consensus       242 ~~rl~g~G~p~~~--~~~GDL~v~~~V~~P~  270 (291)
T PRK14299        242 KLRLKGKGWPRGP--AGRGDQYAEVRITIPT  270 (291)
T ss_pred             EEEECCCCCCCCC--CCCCCEEEEEEEECCC
Confidence            9999999999643  3579999999999995

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=100.00  E-value=4.7e-54  Score=418.41  Aligned_cols=268  Identities=32%  Similarity=0.610  Sum_probs=217.2

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~  160 (416)
                      ..|||++|||+++||.+|||+|||+||++||||+++ +++++++|++|++||++|+||.+|+.||.++..+.... +...
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~-~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~-~~~~   80 (306)
T PRK10266          3 LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQ-FNRQ   80 (306)
T ss_pred             cCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCcc-cccc
Confidence            369999999999999999999999999999999986 46799999999999999999999999999864321100 0000


Q ss_pred             CCCCCccCCCCCCceeccccccccchhhhhhhhhcC-------CCcccCCCeEEEEEeeeeecccCcceeeeeeeeeecC
Q 014884          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD  233 (416)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~-------~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~  233 (416)
                      .  .+   +.+..|.       ..+|.++|+.+|+.       ....++.|+.+++.|+|+|++.|+.+.+.+++.+   
T Consensus        81 ~--~~---~~~~~~~-------~~~~~~~f~~~~g~~~~~~~~~~~~kg~di~~~v~isLee~~~G~~k~i~~~~~~---  145 (306)
T PRK10266         81 F--QH---GDGQSFN-------AEDFDDIFSSIFGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPV---  145 (306)
T ss_pred             c--cc---CCCCCCC-------CCCHHHHHHHHhCCCCCCCCCCCCCCCCceEEEEEEEHHHhcCCceEEEEEeccc---
Confidence            0  00   0000110       01345666666653       1233678999999999999999999999886542   


Q ss_pred             CCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccCCCEEEEc
Q 014884          234 SCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVP  313 (416)
Q Consensus       234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~  313 (416)
                       |.|                 .|.+.                              ....++++|.||+|+++|++|+|+
T Consensus       146 -~~g-----------------~G~~~------------------------------~~~~~~~~V~Ip~G~~~G~~i~~~  177 (306)
T PRK10266        146 -YNA-----------------FGMIE------------------------------QEIPKTLNVKIPAGVGNGQRIRLK  177 (306)
T ss_pred             -ccC-----------------CCeEE------------------------------EeeeEEEEEEECCCCcCCcEEEEe
Confidence             212                 22110                              012358999999999999999999


Q ss_pred             CccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCcEEEEcCCC
Q 014884          314 EAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKG  393 (416)
Q Consensus       314 g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~~~~l~g~G  393 (416)
                      |+|++...+..+|||+|+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+|++|++.|+||+++++|++++|+|+|
T Consensus       178 g~G~~~~~~~~~GDl~v~i~v~ph~~f~r~g~DL~~~~~Isl~~al~G~~~~i~~~~g~v~v~ip~g~~~g~~~ri~g~G  257 (306)
T PRK10266        178 GQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKG  257 (306)
T ss_pred             cCCcCCCCCCCCccEEEEEEEcCCCCeEEeCCceEEEEecCHHHHhCCCEEEeeCCCccEEEEeCCCcCCCCEEEECCCC
Confidence            99998766778999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCcEEEEEEEEcCC
Q 014884          394 LAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       394 ~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      ||..+   .+|||||+|+|.+|+
T Consensus       258 ~p~~~---~~GdL~v~~~v~~P~  277 (306)
T PRK10266        258 LVSKK---QTGDLYAVLKIVMPP  277 (306)
T ss_pred             CCCCC---CCCCEEEEEEEECCC
Confidence            99754   369999999999995

>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=4.8e-43  Score=330.80  Aligned_cols=307  Identities=30%  Similarity=0.439  Sum_probs=232.3

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCcccc
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYS  158 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~  158 (416)
                      ...+|||+||||+++||.+|||+|||+||++||||+|+++|.|.++|++|+.||+|||||.+|+.||++|+.|.....  
T Consensus        13 ~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~--   90 (336)
T KOG0713|consen   13 LAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDEN--   90 (336)
T ss_pred             hcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhcccc--
Confidence            446899999999999999999999999999999999999999999999999999999999999999999988876421  


Q ss_pred             CCCCCCCccCCC-CCCceeccccccccchhhhhhhhhcCCCcccCCCeEEEEEeeeeecccCcceeeeeeeeeecCCCCC
Q 014884          159 AGDAEGFRYAGD-AEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHG  237 (416)
Q Consensus       159 ~~~~~~~~~~~~-~~~f~~~~~~~f~~~~~~~F~~~f~~~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G  237 (416)
                       ....+   ++. .++|..+|+.. +    --|+.....+...+|.++...+..+++++|.|...+....+.+.|. |.|
T Consensus        91 -~~~~~---g~~~~~~f~~~f~df-g----~~~~g~~~~e~~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~v~~~-~~g  160 (336)
T KOG0713|consen   91 -KDGEG---GGGGNDIFSAFFGDF-G----VTVGGNPLEEALPKGSDVSSDLEKQLEHFYMGNFVEEVREKGVYKP-APG  160 (336)
T ss_pred             -ccccc---CCcccchHHHhhccc-c----cccCCCcccCCCCCCceEEeehhhchhhhhcccHHHHHhccCceee-cCc
Confidence             01111   111 24555544321 0    0111111123467889999999999999999887665554444432 111


Q ss_pred             CCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEe-eeeeeEeeCCcEEeceEEEEEEecccccCCCEEEEcCcc
Q 014884          238 RGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRII-KDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAG  316 (416)
Q Consensus       238 ~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~-~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~g~G  316 (416)
                      +- +...+...|                .+..+.|....+ ...|.+|.+.+......++++.+..|+..+....+..+|
T Consensus       161 ~~-~~~~~~~~~----------------~~~~~~g~~~~~q~~~~~~~~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~  223 (336)
T KOG0713|consen  161 TR-KCNCRLEMF----------------TQQEGPGRFQMLQEAVCDECPNVKLVLEEDPLEVEFERGDADGPEEIFELEG  223 (336)
T ss_pred             cc-ccCChhhhe----------------eeccCCChhhhhhhhhhccCCccceeecCCceeeeeeecccCCceeeeeccC
Confidence            11 111111111                122222222222 345666666777778889999999999999999999998


Q ss_pred             CCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCe-EEEEeCCCCCCCcEEEEcCCCcC
Q 014884          317 NAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLA  395 (416)
Q Consensus       317 ~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~-~~v~ip~g~~~g~~~~l~g~G~p  395 (416)
                      .+.. -+.|||+++.+..-+|+.|.|+++|+++++.+++.+++.|+..++.++|+. +.++.-.+..|+..++.+++|||
T Consensus       224 ~~h~-~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~~~r~~~~~p~~~~~~~~~~~~  302 (336)
T KOG0713|consen  224 EPHI-DGVPGDLFFKIVSYTHPRFERKGDDLYTNVTISLEAALVGFEMEILHLDGHYVEVSRKKITWPGARTRKKGEGMP  302 (336)
T ss_pred             Ccce-ecccCCceeeeEEecccceecCccchhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhhccccchhhhhhhccch
Confidence            8764 457999999999999999999999999999999999999999999999997 45666677889999999999999


Q ss_pred             CCCCCCCCCcEEEEEEEEcC
Q 014884          396 KNGLFLDHGDQYVRFRVNFP  415 (416)
Q Consensus       396 ~~~~~~~~Gdl~v~~~v~~P  415 (416)
                      .-......|++|++|.+.+|
T Consensus       303 ~l~~~~~~~~~~~t~~~~~~  322 (336)
T KOG0713|consen  303 LLKNRNEKGNLYVTFDVEFP  322 (336)
T ss_pred             hhhccchhcceeEEecccCc
Confidence            66444467999999999998

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=100.00  E-value=7.7e-41  Score=342.97  Aligned_cols=155  Identities=17%  Similarity=0.227  Sum_probs=136.6

Q ss_pred             CeEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeE
Q 014884          204 DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMT  283 (416)
Q Consensus       204 di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~  283 (416)
                      +|.+.+.|+|+++|+||++++++.|.+.|    |.|.                                           
T Consensus       658 dI~y~l~vtLEeLY~G~tKkIKitR~V~~----g~G~-------------------------------------------  690 (871)
T TIGR03835       658 NLVYEEEVPQILFFNNQIKEIKYTRHTVD----GNTE-------------------------------------------  690 (871)
T ss_pred             ceEEecccCHHHHhCCCeEEEEEEEeecc----CCCc-------------------------------------------
Confidence            56888999999999999999999887654    2111                                           


Q ss_pred             eeCCcEEeceEEEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCe
Q 014884          284 CKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGK  363 (416)
Q Consensus       284 C~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~  363 (416)
                          ..+.+.++++|.||+|+++|++|+|+|+|+.++ ++ +|||||+|+++||+.|+|+|+||+++++|+|.+||+|++
T Consensus       691 ----ktvkE~ktLeVkIPpGVkdGqkIRf~GeGDegp-gg-~GDLyVvIkVKPHp~FrRdGdDL~~~v~ISL~EALLGgt  764 (871)
T TIGR03835       691 ----STTNEAITLEIQLPITSQLNISAIFKGFGHDFG-NG-CGDLKVVFKVIPSNFFQIKNDGLHVAALVDPLVAYNGGI  764 (871)
T ss_pred             ----ceeeeeEEEEEecCCCCCCCCEEEeccccCCCC-CC-CCCEEEEEEEcCCCCeEEECCeEEEEEecCHHHHhcCCE
Confidence                113446799999999999999999999999864 33 499999999999999999999999999999999999999


Q ss_pred             eEEecCCCeEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEE
Q 014884          364 VDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVN  413 (416)
Q Consensus       364 ~~i~~ldg~~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~  413 (416)
                      +.|+||||++.|+||+++++|+++||+|+|||..+  +.||||||+|.|.
T Consensus       765 IeIpTLDGrVkLkIPpgTqpGqvLRIkGKGMP~~~--~~RGDLyV~f~V~  812 (871)
T TIGR03835       765 IDVFGPNKLFNVRIPGGIKVNDQVIFKDLGLTKTK--YDKGSLIVHLYYS  812 (871)
T ss_pred             EEeeCCCCCEEEeeCCCCCCCcEEEECCCCCCCCC--CCCCCEEEEEEEe
Confidence            99999999999999999999999999999999643  3579999999985

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=8.3e-40  Score=313.31  Aligned_cols=241  Identities=44%  Similarity=0.788  Sum_probs=205.4

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG  160 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~  160 (416)
                      ..|||+||||+++|+..|||+||++||++||||.+.+ ++|+++|++|.+|||+|+|+++|++||.++..+.       .
T Consensus        42 ~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~-~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~-------~  113 (288)
T KOG0715|consen   42 KEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKD-KEASKKFKEISEAYEILSDEEKRQEYDVYGLEQH-------G  113 (288)
T ss_pred             CcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhcc-------c
Confidence            3499999999999999999999999999999999986 5899999999999999999999999999965430       0


Q ss_pred             CCCCCccCCCCCCceeccccccccchhhhhhhhhcC-C-CcccCCCeEEEEEeeeeecccCcceeeeeeeeeecCCCCCC
Q 014884          161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-E-TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGR  238 (416)
Q Consensus       161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~-~-~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~  238 (416)
                      ++       .++++             ++|..+|++ . ....+.++++.+.++|+++..|+.+.+.+.....|..|.|.
T Consensus       114 ~~-------~g~~~-------------~~~~~~~~~~~~~~~~~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t~~~~  173 (288)
T KOG0715|consen  114 EF-------GGNPF-------------DVFLEFFGGKMNKRVPDKDQYYDLSLDFKEAVRGSKKRISFNVLSDCETCFGS  173 (288)
T ss_pred             cc-------cCCcc-------------chHHHhhcccccccccCcccccccccCHHHHhhccccceEEEeecccccccCc
Confidence            00       11121             122222322 1 12335688888999999999999999999999999999999


Q ss_pred             CCCCCCcccccCCCcceeEEEeC---CCc-ccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccCCCEEEEcC
Q 014884          239 GFPADAKTKICSTCRGIGRVTIP---PFT-STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPE  314 (416)
Q Consensus       239 G~~~~~~~~~C~~C~G~G~~~~~---~~~-~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~g  314 (416)
                      |...+.+...|..|.|.|.+...   ++. .+|..|.|.|.+..+.|..|.|.|.+...+.+.|.+|+|+.++.+|++.+
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~~~~c~~~~g~~~v~~~k~i~i~~~~g~~~~~~l~~~~  253 (288)
T KOG0715|consen  174 GAEEGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVLRDNCQACSGAGQVRRAKDIMIVLPAGVRSADTLRFAG  253 (288)
T ss_pred             CcccccccccchhhhCcccccccccCCcceeecccccccceeccchHHHhhcchhhhhheeEEeecCcccccccEEEEec
Confidence            99999999999999999965432   332 37999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHH
Q 014884          315 AGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQ  357 (416)
Q Consensus       315 ~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~  357 (416)
                      .|..        ||+|.+.|.+++.|+|+|.|+++++.|++.+
T Consensus       254 ~~~~--------~l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~  288 (288)
T KOG0715|consen  254 HGND--------DLFVRLIVAKSPSFRREGKDILYDAIISFTQ  288 (288)
T ss_pred             CCcc--------eEEEEEEeccCcccccccCcccccccccccC
Confidence            8754        9999999999999999999999999998754

>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.88  E-value=4.7e-22  Score=192.47  Aligned_cols=264  Identities=29%  Similarity=0.476  Sum_probs=176.3

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA  159 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~  159 (416)
                      ..|||++|+|.++|+.+||++||+++|++||||+++.. ..|+++|++|++||++|+|+.+|..||.+++.+..+.....
T Consensus         2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~~~~   81 (306)
T KOG0714|consen    2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGGSFS   81 (306)
T ss_pred             cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccccCCCCC
Confidence            46999999999999999999999999999999998765 24666899999999999999999999999875443311000


Q ss_pred             CC-CCC---CccCCCCCCceeccccc--cccc------h-----hhh-------hhhhhcC-----------CCcccCCC
Q 014884          160 GD-AEG---FRYAGDAEGFRYAYQTH--FSDS------F-----HKI-------FSEIFED-----------ETSHFAPD  204 (416)
Q Consensus       160 ~~-~~~---~~~~~~~~~f~~~~~~~--f~~~------~-----~~~-------F~~~f~~-----------~~~~~g~d  204 (416)
                      .. ..+   +......+.|.++|+..  +...      +     ...       +....+.           ....+...
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (306)
T KOG0714|consen   82 SSFTSELFYFLFRKPDKDFYEFFGVSSPFSGSKKGYRDKNAAPGEEAFKSEGKAFQSLYGPKRKQYDSSGSDRSARQSPP  161 (306)
T ss_pred             CCCCCCcceeccCchhhhHHHHhCCCCCCccccccCCccccccCccccccccccccccCCCcccccccccccccccCCCC
Confidence            00 000   11111122333343311  0000      0     000       0000000           00111112


Q ss_pred             eEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEe
Q 014884          205 IQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTC  284 (416)
Q Consensus       205 i~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C  284 (416)
                      +...+.+++++.+.++.+...+.+...                                               ..... 
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~-  193 (306)
T KOG0714|consen  162 VEHPLRVSLEDLYKGESKKMKISRQSF-----------------------------------------------TSNGR-  193 (306)
T ss_pred             ccCCcceeHHHhccccceeeecccccc-----------------------------------------------cCCcc-
Confidence            333333355555555544444322110                                               00000 


Q ss_pred             eCCcEEeceEEEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEE--EecCHHHHhcCC
Q 014884          285 KGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVD--SNISFTQAILGG  362 (416)
Q Consensus       285 ~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~--~~I~l~~Al~G~  362 (416)
                         ........+.+.+.+++..|+.+....+|+... +..|-++++.+..++|+.|.+.++||...  ..|++.+|++|.
T Consensus       194 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~~~  269 (306)
T KOG0714|consen  194 ---EGSSRSRYLSISIKPGWKEGTKITFPEEGDEEP-GILPADIEFVVDEKPHPLFSRDGNDLSYSSGYEISLKEALLGV  269 (306)
T ss_pred             ---cccCccceeEEeccCCcccccceeccccccccC-CcCcceeEEEEecCCcccccCCCccceecccceeehhhhhcCc
Confidence               012345688999999999999999999998754 36788999999999999999999999999  999999999999


Q ss_pred             eeEEecCCCe-EEEEeC-CCCCCCcEEEEcCCCcCC
Q 014884          363 KVDVPTLSGK-VQVKIP-KGVQPGQLLVLRGKGLAK  396 (416)
Q Consensus       363 ~~~i~~ldg~-~~v~ip-~g~~~g~~~~l~g~G~p~  396 (416)
                      ...++++++. ..+.+. ..+.++....++++|||.
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (306)
T KOG0714|consen  270 TVFVPTLDGRSYSLSINKDLIEPGEEDVIPGEGLPC  305 (306)
T ss_pred             ceeeecccCccccCcccccccCCCceeeecCCCCCC
Confidence            9999999886 444444 567899999999999985

>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.78  E-value=1e-19  Score=167.34  Aligned_cols=72  Identities=49%  Similarity=0.808  Sum_probs=68.8

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS  152 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~  152 (416)
                      ..|+|+|||++++|+.++||||||+||++||||+++++|++.++|++||+||++|+||.+|..||.+|+.+.
T Consensus        30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l  101 (279)
T KOG0716|consen   30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGL  101 (279)
T ss_pred             hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHH
Confidence            679999999999999999999999999999999999999999999999999999999999999999976654

>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=99.76  E-value=1.4e-18  Score=136.02  Aligned_cols=71  Identities=45%  Similarity=0.823  Sum_probs=60.9

Q ss_pred             ceEEEEecCHHHHhcCCeeEEecCCC-eEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          346 DVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       346 DL~~~~~I~l~~Al~G~~~~i~~ldg-~~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      ||+++++|++++|++|++++|+|+|| .+.|+||+++++|++++|+|+|||.....+.+|||||+|+|.||+
T Consensus         1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~   72 (81)
T PF01556_consen    1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPK   72 (81)
T ss_dssp             EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--S
T ss_pred             CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCC
Confidence            89999999999999999999999999 689999999999999999999999875545789999999999995

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....

>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=99.74  E-value=1.6e-17  Score=153.86  Aligned_cols=68  Identities=56%  Similarity=0.903  Sum_probs=64.7

Q ss_pred             CcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChh-HHHHHHHHHHHHHHhhhhhhhhhhccc
Q 014884           80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS-AKRKFQEIRDAYETLRDSEKRAQYDRR  147 (416)
Q Consensus        80 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~-a~~~f~~i~~Ay~~L~d~~~r~~yd~~  147 (416)
                      ...+||+||||+++|+..||++|||++|++||||+++.++. ++++|+.|++||++|+|+.+|+.||..
T Consensus         4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~   72 (237)
T COG2214           4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKI   72 (237)
T ss_pred             hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhh
Confidence            45799999999999999999999999999999999998875 999999999999999999999999996

>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.74  E-value=2.1e-18  Score=164.30  Aligned_cols=73  Identities=52%  Similarity=0.847  Sum_probs=69.5

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE  153 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~  153 (416)
                      ..|||+||||+.+|+.+||++|||+.|++||||||+++|.|.++|+.+.+||+||+|+.+|+.||..+..+..
T Consensus         4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~   76 (296)
T KOG0691|consen    4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSS   76 (296)
T ss_pred             cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhccc
Confidence            5799999999999999999999999999999999999999999999999999999999999999999766544

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=99.74  E-value=3.4e-18  Score=127.71  Aligned_cols=63  Identities=54%  Similarity=0.979  Sum_probs=59.8

Q ss_pred             CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHHhhhhhhhhhhc
Q 014884           83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYD  145 (416)
Q Consensus        83 ~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~~L~d~~~r~~yd  145 (416)
                      |||+||||+++++.++||++|+++++++|||++..+. ++++.|+.|++||++|+||.+|+.||
T Consensus         1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD   64 (64)
T PF00226_consen    1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD   64 (64)
T ss_dssp             HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence            6899999999999999999999999999999987665 58899999999999999999999998

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.72  E-value=3.4e-18  Score=166.99  Aligned_cols=75  Identities=40%  Similarity=0.721  Sum_probs=68.7

Q ss_pred             CcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCC
Q 014884           80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN---PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSEN  154 (416)
Q Consensus        80 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~---~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~  154 (416)
                      .+.|||.+|+|+++||.+|||+|||++++.|||||..+.   ..|++.|+.|.+|||||+||.+|++||.+|++|...
T Consensus         7 ~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~t   84 (546)
T KOG0718|consen    7 DEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLKT   84 (546)
T ss_pred             chhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhccccc
Confidence            456999999999999999999999999999999998742   248999999999999999999999999999998763

>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.69  E-value=1.3e-17  Score=163.10  Aligned_cols=71  Identities=49%  Similarity=0.743  Sum_probs=66.0

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRS  149 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~  149 (416)
                      .+.+.||+||||.++|+..|||++||+||++||||+|+.. .+|.++|+.|+.||+|||||..|+-||.+.+
T Consensus         5 ~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hre   76 (508)
T KOG0717|consen    5 FKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHRE   76 (508)
T ss_pred             hhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHH
Confidence            4567999999999999999999999999999999998754 5699999999999999999999999999876

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=99.69  E-value=3.1e-17  Score=173.45  Aligned_cols=74  Identities=31%  Similarity=0.508  Sum_probs=68.2

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCC
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE  153 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~  153 (416)
                      ....+||+||||+++||..|||+|||+||++||||+++++ .|.++|++|++||+||+||.+|+.||.+|..|..
T Consensus       570 ~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~-~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~  643 (1136)
T PTZ00341        570 IPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN-EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIK  643 (1136)
T ss_pred             CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccC
Confidence            3467999999999999999999999999999999999864 6888999999999999999999999999877654

>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.66  E-value=7.4e-17  Score=144.99  Aligned_cols=70  Identities=49%  Similarity=0.797  Sum_probs=64.2

Q ss_pred             CcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CChhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 014884           80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANK--NNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS  149 (416)
Q Consensus        80 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~--~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~  149 (416)
                      ...|+|+||||.++|+.++|++||++||+++|||+++  ...+|.++|++|+.||.||+|..+|+.||..|.
T Consensus        12 ~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~   83 (264)
T KOG0719|consen   12 NKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGS   83 (264)
T ss_pred             cccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCC
Confidence            4469999999999999999999999999999999994  345699999999999999999999999999853

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=99.64  E-value=2.9e-16  Score=115.58  Aligned_cols=59  Identities=58%  Similarity=0.901  Sum_probs=54.6

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-ChhHHHHHHHHHHHHHHhhhhhh
Q 014884           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN-NPSAKRKFQEIRDAYETLRDSEK  140 (416)
Q Consensus        82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~~a~~~f~~i~~Ay~~L~d~~~  140 (416)
                      .|||+||||+++++.++||++|+++++++|||++++ .+.+++.|++|++||++|+||.+
T Consensus         1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~~   60 (60)
T smart00271        1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK   60 (60)
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCCC
Confidence            389999999999999999999999999999999986 56788999999999999999853

>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]

Probab=99.63  E-value=5e-16  Score=147.41  Aligned_cols=69  Identities=48%  Similarity=0.747  Sum_probs=64.0

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChh---HHHHHHHHHHHHHHhhhhhhhhhhccc
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYETLRDSEKRAQYDRR  147 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~---a~~~f~~i~~Ay~~L~d~~~r~~yd~~  147 (416)
                      +..+|||+||||.++|+..||-||||++|.+||||...+..+   |+++|-.|..|-|||+||++|+.+|..
T Consensus       391 s~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnG  462 (504)
T KOG0624|consen  391 SGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNG  462 (504)
T ss_pred             hccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCC
Confidence            456899999999999999999999999999999999986543   899999999999999999999999985

>cd06257 DnaJ DnaJ domain or J-domain

Probab=99.61  E-value=9.5e-16  Score=110.70  Aligned_cols=55  Identities=56%  Similarity=0.985  Sum_probs=51.7

Q ss_pred             CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhh
Q 014884           83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRD  137 (416)
Q Consensus        83 ~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d  137 (416)
                      |||+||||+++++.++||++|++|++++|||++++.+.+.+.|++|++||++|+|
T Consensus         1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d   55 (55)
T cd06257           1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD   55 (55)
T ss_pred             ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence            6899999999999999999999999999999997656788999999999999986

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>PHA03102 Small T antigen; Reviewed

Probab=99.59  E-value=1.6e-15  Score=131.26  Aligned_cols=66  Identities=24%  Similarity=0.466  Sum_probs=60.8

Q ss_pred             CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 014884           82 RDPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG  151 (416)
Q Consensus        82 ~~~y~iLgv~~~a--~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g  151 (416)
                      ..+|+||||+++|  |.+|||+|||++|+++|||++++    +++|++||+||++|+|+.+|..||.++...
T Consensus         5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~----~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~   72 (153)
T PHA03102          5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD----EEKMKELNTLYKKFRESVKSLRDLDGEEDS   72 (153)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch----hHHHHHHHHHHHHHhhHHHhccccccCCcc
Confidence            5789999999999  99999999999999999999764    479999999999999999999999987544

>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.57  E-value=2.9e-15  Score=133.75  Aligned_cols=71  Identities=37%  Similarity=0.665  Sum_probs=65.0

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS  149 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~  149 (416)
                      ....|+|+||||++++|.+|||+|||+|.+++||||++...+.++.|..|++||+.|+|+..|..|..+|.
T Consensus        96 ~~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~  166 (230)
T KOG0721|consen   96 RQKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGN  166 (230)
T ss_pred             hhcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCC
Confidence            34579999999999999999999999999999999998655678889999999999999999999999964

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=99.52  E-value=5.7e-14  Score=137.22  Aligned_cols=131  Identities=28%  Similarity=0.586  Sum_probs=103.0

Q ss_pred             EEEEeeeeecccCccee--eeeeeeeecCCCCCCCCCCCCc-------ccccCCCcceeEEEeCCCcccCCCCCCceEEe
Q 014884          207 VELVLSFAEAAKGCTKH--VSFDAFVPCDSCHGRGFPADAK-------TKICSTCRGIGRVTIPPFTSTCSTCKGLGRII  277 (416)
Q Consensus       207 ~~l~isl~e~~~G~~~~--~~~~~~~~C~~C~G~G~~~~~~-------~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~  277 (416)
                      .++.++-...+.-|...  -.-+...+|++|+|+|.....+       +.+|+.|+|+|.+    +..+|..|+|.|++.
T Consensus       135 ~~i~~~~~~~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~----i~~pC~~C~G~G~v~  210 (371)
T COG0484         135 KEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKI----IKDPCGKCKGKGRVK  210 (371)
T ss_pred             eeEecceeeECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeE----CCCCCCCCCCCCeEe
Confidence            45555555555444333  1223678999999999753322       6799999999998    578999999999998


Q ss_pred             eeeeeEeeCC-cEEeceE--------------------------------------------------------------
Q 014884          278 KDHCMTCKGS-GVVDGVK--------------------------------------------------------------  294 (416)
Q Consensus       278 ~~~C~~C~g~-G~~~~~~--------------------------------------------------------------  294 (416)
                      +..-.+++.+ |+.++++                                                              
T Consensus       211 ~~~~i~V~IPaGv~~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g  290 (371)
T COG0484         211 KKKSISVNIPAGVDDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDG  290 (371)
T ss_pred             eeeEEEEECCCCCccCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCC
Confidence            8888888886 6666655                                                              


Q ss_pred             EEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcC
Q 014884          295 EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFS  341 (416)
Q Consensus       295 ~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~  341 (416)
                      .++|.||||+++|++++|+|+|.+...+...|||||+|.|.-...+.
T Consensus       291 ~~~l~ip~Gtq~G~~~rl~gkG~p~~~~~~~GDl~v~v~v~~P~~ls  337 (371)
T COG0484         291 RVKLKIPAGTQTGEVFRLRGKGMPKLRSGGRGDLYVRVKVETPKNLS  337 (371)
T ss_pred             CEEEecCCCCccCcEEEEcCCCccccCCCCcCCEEEEEEEEcCCCCC
Confidence            77899999999999999999999987777789999999998655543

>PRK05014 hscB co-chaperone HscB; Provisional

Probab=99.50  E-value=3.2e-14  Score=126.76  Aligned_cols=66  Identities=32%  Similarity=0.539  Sum_probs=58.6

Q ss_pred             CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhhhhhhhhhhccc
Q 014884           82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRR  147 (416)
Q Consensus        82 ~~~y~iLgv~~~--a~~~eik~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~~L~d~~~r~~yd~~  147 (416)
                      .|||++|||++.  ++..+|+++||+|++++|||+..+.++     +.+.|+.||+||++|+||.+|+.|+-.
T Consensus         1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~   73 (171)
T PRK05014          1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLS   73 (171)
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHH
Confidence            389999999995  788999999999999999999765432     567899999999999999999999864

>PRK01356 hscB co-chaperone HscB; Provisional

Probab=99.48  E-value=4.3e-14  Score=125.15  Aligned_cols=67  Identities=30%  Similarity=0.510  Sum_probs=58.4

Q ss_pred             CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh---HHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 014884           82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYETLRDSEKRAQYDRRR  148 (416)
Q Consensus        82 ~~~y~iLgv~~~--a~~~eik~ayr~la~~~HPD~~~~~~~---a~~~f~~i~~Ay~~L~d~~~r~~yd~~~  148 (416)
                      .|||++|||++.  ++.++|+++||+|++++|||++.+..+   +.+.+..||+||++|+||.+|+.|+-..
T Consensus         2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l   73 (166)
T PRK01356          2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLL   73 (166)
T ss_pred             CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHc
Confidence            589999999996  789999999999999999999865332   3346789999999999999999998764

>PRK03578 hscB co-chaperone HscB; Provisional

Probab=99.47  E-value=7.2e-14  Score=124.83  Aligned_cols=67  Identities=31%  Similarity=0.513  Sum_probs=58.7

Q ss_pred             cCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChhHHH-----HHHHHHHHHHHhhhhhhhhhhccc
Q 014884           81 KRDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPSAKR-----KFQEIRDAYETLRDSEKRAQYDRR  147 (416)
Q Consensus        81 ~~~~y~iLgv~~~--a~~~eik~ayr~la~~~HPD~~~~~~~a~~-----~f~~i~~Ay~~L~d~~~r~~yd~~  147 (416)
                      ..|||++|||++.  ++..+|+++||+|++++|||++.+.+++++     .++.||+||++|+||.+|+.|+-.
T Consensus         5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~   78 (176)
T PRK03578          5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLH   78 (176)
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHH
Confidence            4799999999995  689999999999999999999876555444     458999999999999999999964

>PRK00294 hscB co-chaperone HscB; Provisional

Probab=99.47  E-value=8.2e-14  Score=123.92  Aligned_cols=69  Identities=23%  Similarity=0.435  Sum_probs=61.0

Q ss_pred             CcCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 014884           80 SKRDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRR  148 (416)
Q Consensus        80 ~~~~~y~iLgv~~~--a~~~eik~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~~L~d~~~r~~yd~~~  148 (416)
                      ...|||++||+++.  .+..+|+++||+|++++|||++.+.++     +.+.|+.||+||++|+||.+|+.|+-..
T Consensus         2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l   77 (173)
T PRK00294          2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLAL   77 (173)
T ss_pred             CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHh
Confidence            35799999999996  678999999999999999999876543     5678999999999999999999999753

>PRK14282 chaperone protein DnaJ; Provisional

Probab=99.47  E-value=1.4e-13  Score=137.79  Aligned_cols=140  Identities=25%  Similarity=0.471  Sum_probs=101.9

Q ss_pred             EEEEeeeeecccCcceee--eeeeeeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceE
Q 014884          207 VELVLSFAEAAKGCTKHV--SFDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR  275 (416)
Q Consensus       207 ~~l~isl~e~~~G~~~~~--~~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~  275 (416)
                      ..+.++-...+..|...-  .-.....|+.|+|+|....         ....+|+.|+|.|.+    +...|..|+|.|.
T Consensus       145 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~  220 (369)
T PRK14282        145 IPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKI----PGEYCHECGGSGR  220 (369)
T ss_pred             EEEEeeecccCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCccee----CCCCCCCCCCcee
Confidence            344455454444343322  1123568999999997532         235699999999987    4678999999998


Q ss_pred             EeeeeeeEeeCC-cEEeceE------------------------------------------------------------
Q 014884          276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------  294 (416)
Q Consensus       276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------  294 (416)
                      +.+..-.++..+ |+.++.+                                                            
T Consensus       221 v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~l  300 (369)
T PRK14282        221 IRRRVRTTVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLP  300 (369)
T ss_pred             EEEEEEEEEEeCCCCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCC
Confidence            765544444443 4333322                                                            


Q ss_pred             ---EEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEE
Q 014884          295 ---EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVD  350 (416)
Q Consensus       295 ---~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~  350 (416)
                         .++|.||+|+++|++|+|+|+|++...+..+|||||+|+|+.|+.|++++.+|+.+
T Consensus       301 dG~~i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~~~~ll~~  359 (369)
T PRK14282        301 EGGTTMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIVNVHVEIPKRLSREERKLLKE  359 (369)
T ss_pred             CCcEEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence               68999999999999999999999865445689999999999999999999887654

>PRK14290 chaperone protein DnaJ; Provisional

Probab=99.43  E-value=3.6e-13  Score=134.54  Aligned_cols=120  Identities=23%  Similarity=0.584  Sum_probs=95.9

Q ss_pred             eeeecCCCCCCCCCCCC---------cccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE---
Q 014884          228 AFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---  294 (416)
Q Consensus       228 ~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~---  294 (416)
                      ....|+.|+|+|.....         ...+|+.|.|.|.+    ....|..|+|.|.+.+..-.+...+ |+.++.+   
T Consensus       164 ~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~  239 (365)
T PRK14290        164 KLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRI----PEEKCPRCNGTGTVVVNEDISVKIPKGATDNLRLRV  239 (365)
T ss_pred             CCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeE----ccCCCCCCCCceeEEEeeEEEEEECCCCCCCcEEEE
Confidence            45789999999964211         24689999999997    5678999999999876555555553 4443333   


Q ss_pred             ---------------------------------------------------------EEEEEecccccCCCEEEEcCccC
Q 014884          295 ---------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAGN  317 (416)
Q Consensus       295 ---------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~G~  317 (416)
                                                                               +++|.||+|+++|++|+|+|+|.
T Consensus       240 ~g~G~~~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~i~V~Ip~g~~~g~~iri~g~G~  319 (365)
T PRK14290        240 KGKGQSYGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKYNLKIPEGTQPGEVLKIKGAGM  319 (365)
T ss_pred             ccccCCCCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCceEEEEECCccCCCcEEEECCCCC
Confidence                                                                     68999999999999999999999


Q ss_pred             CCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEE
Q 014884          318 AGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS  351 (416)
Q Consensus       318 ~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~  351 (416)
                      +...+..+|||||+|+|+.++.|++++.+|+.++
T Consensus       320 p~~~~~~~GDL~V~~~V~~P~~l~~~~~~ll~~~  353 (365)
T PRK14290        320 PHLNGHGSGDLLVRINVEVPKRLTSKQKELIREF  353 (365)
T ss_pred             CCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            8665556899999999999999999988877653

>PRK14294 chaperone protein DnaJ; Provisional

Probab=99.40  E-value=5.9e-13  Score=133.09  Aligned_cols=118  Identities=29%  Similarity=0.599  Sum_probs=92.1

Q ss_pred             eeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE--------
Q 014884          229 FVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK--------  294 (416)
Q Consensus       229 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~--------  294 (416)
                      ...|+.|+|+|....     ....+|+.|+|.|..    +...|..|.|.|.+.+..-.+...+ |+..+.+        
T Consensus       161 ~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~  236 (366)
T PRK14294        161 PTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKV----IVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEGE  236 (366)
T ss_pred             cccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCee----cCcCCCCCCCceEeecceeEEEecCCCCcCCcEEEEccCcc
Confidence            468999999997431     135699999999997    4678999999998865444444432 4333322        


Q ss_pred             ------------------------------------------------------EEEEEecccccCCCEEEEcCccCCCC
Q 014884          295 ------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAGNAGG  320 (416)
Q Consensus       295 ------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~G~~~~  320 (416)
                                                                            .++|.||+|+++|++|+|+|+|++..
T Consensus       237 ~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~iri~G~G~p~~  316 (366)
T PRK14294        237 AGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIFRFKGKGIPSL  316 (366)
T ss_pred             CCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCcEEEEECCCcCCCCEEEECCCCCCCC
Confidence                                                                  56899999999999999999999865


Q ss_pred             CCCCCccEEEEEEEEeCCCcCCCCCceEEE
Q 014884          321 RGRQHGNLFIKLKVADDPIFSRDGADVYVD  350 (416)
Q Consensus       321 ~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~  350 (416)
                      .+..+|||||+|+|..|+.|+++..+|+..
T Consensus       317 ~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~  346 (366)
T PRK14294        317 RGGGRGDQIIEVEVKVPTRLTKKQEELLTE  346 (366)
T ss_pred             CCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            555689999999999999998888776654

>PRK14298 chaperone protein DnaJ; Provisional

Probab=99.40  E-value=5.3e-13  Score=133.70  Aligned_cols=120  Identities=27%  Similarity=0.567  Sum_probs=93.1

Q ss_pred             eeeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE---
Q 014884          228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---  294 (416)
Q Consensus       228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~---  294 (416)
                      ....|+.|+|+|....         ....+|+.|+|+|.+    +...|..|.|.|.+.+..-..+..+ |+.++.+   
T Consensus       157 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~~  232 (377)
T PRK14298        157 SPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQV----IESPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKL  232 (377)
T ss_pred             CCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcc----cCCCCCCCCCccEEEEEEEEEecCCCCCCCCCEEEE
Confidence            3467999999996421         225689999999987    4578999999999876555555443 4433333   


Q ss_pred             -----------------------------------------------------------EEEEEecccccCCCEEEEcCc
Q 014884          295 -----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEA  315 (416)
Q Consensus       295 -----------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~  315 (416)
                                                                                 .++|.||+|+++|++++|+|+
T Consensus       233 ~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~lri~g~  312 (377)
T PRK14298        233 SGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGKVKMNIPPGTQTHSVFRLKDK  312 (377)
T ss_pred             ecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCCEEEEeCCCcccCCEEEECCC
Confidence                                                                       578999999999999999999


Q ss_pred             cCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEE
Q 014884          316 GNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS  351 (416)
Q Consensus       316 G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~  351 (416)
                      |.+...+...|||||+|+|..++.+++++.+|+.++
T Consensus       313 G~p~~~~~~~GDL~V~~~V~~P~~ls~~~~~ll~~l  348 (377)
T PRK14298        313 GMPRLHGHGKGDQLVKVIVKTPTKLTQEQKELLREF  348 (377)
T ss_pred             CCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            998655556799999999999888988887765543

>PRK14285 chaperone protein DnaJ; Provisional

Probab=99.39  E-value=9.3e-13  Score=131.47  Aligned_cols=138  Identities=21%  Similarity=0.458  Sum_probs=99.0

Q ss_pred             EEEEeeeeecccCcceee--eeeeeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeee
Q 014884          207 VELVLSFAEAAKGCTKHV--SFDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD  279 (416)
Q Consensus       207 ~~l~isl~e~~~G~~~~~--~~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~  279 (416)
                      .++.++....+..|...-  .-.....|+.|+|+|....     .....|+.|.|.|.+    +...|..|+|.|.+.+.
T Consensus       139 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~  214 (365)
T PRK14285        139 NNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKI----ISNPCKSCKGKGSLKKK  214 (365)
T ss_pred             EEEEeeecccCCCCCCcccCCCCCCccCCCccCceeEEecCceeEEeeecCCCCCcccc----cCCCCCCCCCCCEEecc
Confidence            344454454444333322  1223567999999996421     236799999999987    46789999999988654


Q ss_pred             eeeEeeCC-cEEeceE---------------------------------------------------------------E
Q 014884          280 HCMTCKGS-GVVDGVK---------------------------------------------------------------E  295 (416)
Q Consensus       280 ~C~~C~g~-G~~~~~~---------------------------------------------------------------~  295 (416)
                      .-..+..+ |+..+++                                                               .
T Consensus       215 ~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~  294 (365)
T PRK14285        215 ETIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKK  294 (365)
T ss_pred             EEEEEEECCCCCCCCEEEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCE
Confidence            44444443 3333322                                                               6


Q ss_pred             EEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceE
Q 014884          296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVY  348 (416)
Q Consensus       296 l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~  348 (416)
                      ++|.||+|+++|++|+|+|+|++...+...|||||+|+|+.|+.|++++..|+
T Consensus       295 v~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~~l  347 (365)
T PRK14285        295 IKIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILIIKIKTPKNLNSNAIKLL  347 (365)
T ss_pred             EEEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
Confidence            89999999999999999999998655445699999999999999888775543

>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.39  E-value=2.4e-13  Score=132.08  Aligned_cols=69  Identities=45%  Similarity=0.719  Sum_probs=65.2

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhhhhhhhhhhccc
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRR  147 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~  147 (416)
                      +..+|||.|||+.++|+..|||+|||++|+.+|||++..+ .+++.+|++|-+||.+|+||.+|..||..
T Consensus       370 SkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg  439 (486)
T KOG0550|consen  370 SKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSG  439 (486)
T ss_pred             hhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccc
Confidence            4468999999999999999999999999999999999877 68999999999999999999999999986

>PRK10767 chaperone protein DnaJ; Provisional

Probab=99.37  E-value=1.2e-12  Score=131.32  Aligned_cols=140  Identities=24%  Similarity=0.507  Sum_probs=100.8

Q ss_pred             EEEeeeeecccCcceee--eeeeeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeee
Q 014884          208 ELVLSFAEAAKGCTKHV--SFDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH  280 (416)
Q Consensus       208 ~l~isl~e~~~G~~~~~--~~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~  280 (416)
                      .+.++-...+..|...-  .-.....|+.|+|+|....     ....+|+.|.|.|..    +...|..|.|.|.+.+..
T Consensus       136 ~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~  211 (371)
T PRK10767        136 EIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKI----IKDPCKKCHGQGRVEKEK  211 (371)
T ss_pred             EEeeeecccCCCCCCcccCCCCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeE----CCCCCCCCCCCceEeeee
Confidence            44444454444343222  1123468999999996421     234689999999997    467899999999986655


Q ss_pred             eeEeeCC-cEEeceE--------------------------------------------------------------EEE
Q 014884          281 CMTCKGS-GVVDGVK--------------------------------------------------------------EVK  297 (416)
Q Consensus       281 C~~C~g~-G~~~~~~--------------------------------------------------------------~l~  297 (416)
                      ...+..+ |+..+.+                                                              .++
T Consensus       212 ~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~i~  291 (371)
T PRK10767        212 TLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVK  291 (371)
T ss_pred             eEEEecCCCCCCCcEEEEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCcEE
Confidence            5555443 3322222                                                              578


Q ss_pred             EEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEE
Q 014884          298 VTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS  351 (416)
Q Consensus       298 V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~  351 (416)
                      |.||+|+++|++++|+|+|.+...+...|||||+|+|..++.|++++.+|+.++
T Consensus       292 v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~~~~ll~~l  345 (371)
T PRK10767        292 LKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQVVVETPVNLTKRQKELLEEF  345 (371)
T ss_pred             EEeCCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            999999999999999999998655556899999999999888998888776553

>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.36  E-value=4.9e-13  Score=131.33  Aligned_cols=67  Identities=36%  Similarity=0.600  Sum_probs=64.4

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR  148 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~  148 (416)
                      ..|.|.+|||++++|.++||+.||++|...|||||. .+.|+|.|+.|+.||++|+|+.+|..||...
T Consensus       234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~-~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~  300 (490)
T KOG0720|consen  234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNM-IPRAEEAFKKLQVAFEVIGDSVKRKEYDLEL  300 (490)
T ss_pred             CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccC-ChhHHHHHHHHHHHHHHhcchhhhhHHHHHH
Confidence            579999999999999999999999999999999998 6899999999999999999999999999864

>PTZ00100 DnaJ chaperone protein; Provisional

Probab=99.36  E-value=8.4e-13  Score=108.47  Aligned_cols=54  Identities=26%  Similarity=0.433  Sum_probs=48.6

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhh
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLR  136 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~  136 (416)
                      +...++|+||||++++|.+|||++||+|++++|||+.+ +   .+.|++|++||++|.
T Consensus        62 Ms~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgG-s---~~~~~kIneAyevL~  115 (116)
T PTZ00100         62 MSKSEAYKILNISPTASKERIREAHKQLMLRNHPDNGG-S---TYIASKVNEAKDLLL  115 (116)
T ss_pred             CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHHh
Confidence            44579999999999999999999999999999999964 3   468999999999995

>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.36  E-value=2.5e-13  Score=123.57  Aligned_cols=67  Identities=43%  Similarity=0.759  Sum_probs=62.7

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR  148 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~  148 (416)
                      ..|.|+||||+++++..||.+|||+||++||||++++ +++.+.|..|.+||++|.|...|..||-..
T Consensus        32 ~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~-~e~k~~F~~iAtayeilkd~e~rt~ydyal   98 (329)
T KOG0722|consen   32 AENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRD-PESKKLFVKIATAYEILKDNETRTQYDYAL   98 (329)
T ss_pred             chhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCC-chhhhhhhhhhcccccccchhhHHhHHHHh
Confidence            4699999999999999999999999999999999985 666799999999999999999999999864

>PRK14301 chaperone protein DnaJ; Provisional

Probab=99.34  E-value=2.6e-12  Score=128.59  Aligned_cols=136  Identities=26%  Similarity=0.482  Sum_probs=95.2

Q ss_pred             EEEEeeeeecccCcceeee--eeeeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeee
Q 014884          207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD  279 (416)
Q Consensus       207 ~~l~isl~e~~~G~~~~~~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~  279 (416)
                      .++.++....+..|...-.  -.....|+.|+|+|....     .....|+.|+|.|.+    +...|..|.|.|.+.+.
T Consensus       137 k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~  212 (373)
T PRK14301        137 VTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRV----ITHPCPKCKGSGIVQQT  212 (373)
T ss_pred             EEEEeeecccCCCCCCcccCCCCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeee----cCCCCCCCCCCceeccc
Confidence            3444444444444433221  223468999999997421     235789999999998    45789999999988654


Q ss_pred             eeeEeeCC-cEEeceE--------------------------------------------------------------EE
Q 014884          280 HCMTCKGS-GVVDGVK--------------------------------------------------------------EV  296 (416)
Q Consensus       280 ~C~~C~g~-G~~~~~~--------------------------------------------------------------~l  296 (416)
                      .-.++..+ |+..+.+                                                              .+
T Consensus       213 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~i  292 (373)
T PRK14301        213 RELKVRIPAGVDTGSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPV  292 (373)
T ss_pred             eEEEEEeCCCCcCCCEEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCccE
Confidence            44444432 3332222                                                              67


Q ss_pred             EEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCc
Q 014884          297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGAD  346 (416)
Q Consensus       297 ~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~D  346 (416)
                      +|.||+|+++|++++|+|+|.+...+...|||||+|+|..++.+..+..+
T Consensus       293 ~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~I~~~V~~P~~l~~~q~~  342 (373)
T PRK14301        293 TLDIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLVEVSVVTPTKLTKRQEE  342 (373)
T ss_pred             EEEECCCcCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHH
Confidence            99999999999999999999987655568999999999988766554433

>PRK14300 chaperone protein DnaJ; Provisional

Probab=99.32  E-value=9.8e-12  Score=124.53  Aligned_cols=110  Identities=29%  Similarity=0.649  Sum_probs=84.1

Q ss_pred             eeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE-------
Q 014884          228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK-------  294 (416)
Q Consensus       228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~-------  294 (416)
                      ....|+.|+|+|....     ....+|+.|+|.|.+    ....|..|.|.|.+.+..-.++..+ |+..+.+       
T Consensus       161 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G  236 (372)
T PRK14300        161 TVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQI----IKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGEG  236 (372)
T ss_pred             CCccCCCccCeEEEEEeeceEEEEEeCCCCCccceE----eCCCCCCCCCceEEEeeEEEEEEECCCCCCCcEEEEeccc
Confidence            3468999999997521     135689999999998    3578999999999865444444433 3322222       


Q ss_pred             --------------------------------------------------------EEEEEecccccCCCEEEEcCccCC
Q 014884          295 --------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAGNA  318 (416)
Q Consensus       295 --------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~G~~  318 (416)
                                                                              .++|.||+|+++|++|+|+|+|.+
T Consensus       237 ~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri~g~G~p  316 (372)
T PRK14300        237 EAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRLRSKGMS  316 (372)
T ss_pred             cCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEEECCCCCC
Confidence                                                                    689999999999999999999998


Q ss_pred             CCCCCCCccEEEEEEEEeCCCcC
Q 014884          319 GGRGRQHGNLFIKLKVADDPIFS  341 (416)
Q Consensus       319 ~~~g~~~GDl~v~i~v~~h~~f~  341 (416)
                      ...+..+|||||+|+|+.+..+.
T Consensus       317 ~~~~~~~GDL~V~~~v~~P~~ls  339 (372)
T PRK14300        317 KMRSTIRGDMLTHIHVEVPKNLS  339 (372)
T ss_pred             CCCCCCCCCEEEEEEEECCCCCC
Confidence            65555689999999999776654

>PRK14284 chaperone protein DnaJ; Provisional

Probab=99.31  E-value=4.3e-12  Score=127.90  Aligned_cols=116  Identities=30%  Similarity=0.670  Sum_probs=88.1

Q ss_pred             eeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE-------
Q 014884          228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK-------  294 (416)
Q Consensus       228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~-------  294 (416)
                      ....|+.|+|+|....     ....+|+.|+|.|.+    +...|..|.|.|.+.+..-.++..+ |+.++++       
T Consensus       174 ~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G  249 (391)
T PRK14284        174 GIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRV----ITDPCSVCRGQGRIKDKRSVHVHIPAGVDSGMRLKMEGYG  249 (391)
T ss_pred             CCeecCccCCeeEEEEEeceEEEEEECCCCCCCCcc----cCCcCCCCCCcceecceEEEEEEECCCCCCCCEEEEeccc
Confidence            3467999999987421     134689999999987    4568999999998765555555443 4444333       


Q ss_pred             ---------------------------------------------------------EEEEEecccccCCCEEEEcCccC
Q 014884          295 ---------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAGN  317 (416)
Q Consensus       295 ---------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~G~  317 (416)
                                                                               .++|.||+|+++|++++|+|+|.
T Consensus       250 ~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i~v~Ip~g~~~g~~~~i~g~G~  329 (391)
T PRK14284        250 DAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCRLTIPEGIQSGTILKVRGQGF  329 (391)
T ss_pred             cCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEEEEEECCccCCCeEEEECCCCC
Confidence                                                                     56799999999999999999999


Q ss_pred             CCCCCCCCccEEEEEEEEeCCCcCCCCCce
Q 014884          318 AGGRGRQHGNLFIKLKVADDPIFSRDGADV  347 (416)
Q Consensus       318 ~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL  347 (416)
                      +...+..+|||||+|+|..+..++.+..+|
T Consensus       330 p~~~~~~~GDL~V~~~v~~P~~l~~~q~~l  359 (391)
T PRK14284        330 PNVHGKGRGDLLVRISVETPQNLSEEQKEL  359 (391)
T ss_pred             CCCCCCCCCcEEEEEEEECCCCCCHHHHHH
Confidence            865555689999999999877776655444

>PRK14287 chaperone protein DnaJ; Provisional

Probab=99.31  E-value=3.7e-12  Score=127.46  Aligned_cols=116  Identities=26%  Similarity=0.607  Sum_probs=88.9

Q ss_pred             eeeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE---
Q 014884          228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---  294 (416)
Q Consensus       228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~---  294 (416)
                      ....|+.|+|+|....         ....+|+.|.|.|.+    +...|..|+|.|.+.+..-..+..+ |+..+.+   
T Consensus       154 ~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~  229 (371)
T PRK14287        154 KPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKI----IKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRV  229 (371)
T ss_pred             CCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCcc----ccccCCCCCCeeEEeeeEEEEEEECCcCCCCCEEEE
Confidence            3567999999997432         125689999999987    4578999999998765555555443 4333322   


Q ss_pred             -----------------------------------------------------------EEEEEecccccCCCEEEEcCc
Q 014884          295 -----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEA  315 (416)
Q Consensus       295 -----------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~  315 (416)
                                                                                 .++|.||+|+++|++++|+|+
T Consensus       230 ~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~~~ri~g~  309 (371)
T PRK14287        230 SGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGKVKLKIPAGTQTGTSFRLRGK  309 (371)
T ss_pred             ccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCCEEEEECCCccCCcEEEEcCC
Confidence                                                                       678999999999999999999


Q ss_pred             cCCCCCCCCCccEEEEEEEEeCCCcCCCCCce
Q 014884          316 GNAGGRGRQHGNLFIKLKVADDPIFSRDGADV  347 (416)
Q Consensus       316 G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL  347 (416)
                      |.+...+...|||||+|+|..++.++++...|
T Consensus       310 G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~l  341 (371)
T PRK14287        310 GVPNVHGRGQGDQHVQVRVVTPKNLTEKEKEL  341 (371)
T ss_pred             CccCCCCCCCCCEEEEEEEEcCCCCCHHHHHH
Confidence            99865555679999999999888776655443

>PRK14288 chaperone protein DnaJ; Provisional

Probab=99.30  E-value=1.8e-11  Score=122.41  Aligned_cols=112  Identities=24%  Similarity=0.525  Sum_probs=86.6

Q ss_pred             eeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE-------
Q 014884          228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK-------  294 (416)
Q Consensus       228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~-------  294 (416)
                      ....|+.|+|+|....     ....+|+.|.|.|.+    +...|..|.|.|.+.+..-.+...+ |+.++++       
T Consensus       155 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~l~g~G  230 (369)
T PRK14288        155 ALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKI----IKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKG  230 (369)
T ss_pred             CCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceE----ccccCccCCCcceEEEEEEEEEecCCCCCCCCEEEEccCc
Confidence            4578999999996421     224589999999997    4577999999999876555555553 4433332       


Q ss_pred             -------------------------------------------------------EEEEEecccccCCCEEEEcCccCCC
Q 014884          295 -------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAGNAG  319 (416)
Q Consensus       295 -------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~G~~~  319 (416)
                                                                             .++|.||+|+++|++++|+|+|.+.
T Consensus       231 ~~~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~i~g~G~p~  310 (369)
T PRK14288        231 NEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFAFRNEGVKH  310 (369)
T ss_pred             cCCCCCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEEEcCCCCCC
Confidence                                                                   5899999999999999999999986


Q ss_pred             CCCCCCccEEEEEEEEeCCCcCCC
Q 014884          320 GRGRQHGNLFIKLKVADDPIFSRD  343 (416)
Q Consensus       320 ~~g~~~GDl~v~i~v~~h~~f~r~  343 (416)
                      ..+...|||||+|+|+.+..+..+
T Consensus       311 ~~~~~~GDL~v~~~v~~P~~ls~~  334 (369)
T PRK14288        311 PESSYRGSLIVELQVIYPKSLNKE  334 (369)
T ss_pred             CCCCCCCCEEEEEEEECCCCCCHH
Confidence            544446999999999987766543

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=99.29  E-value=6.3e-12  Score=125.36  Aligned_cols=114  Identities=34%  Similarity=0.655  Sum_probs=84.4

Q ss_pred             eeecCCCCCCCCCC---------CCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE----
Q 014884          229 FVPCDSCHGRGFPA---------DAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK----  294 (416)
Q Consensus       229 ~~~C~~C~G~G~~~---------~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~----  294 (416)
                      ...|..|+|+|...         .....+|+.|.|.|.+    +...|..|.|.|.+.+..-.....+ |+..+++    
T Consensus       160 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~  235 (354)
T TIGR02349       160 PKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKI----IKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVS  235 (354)
T ss_pred             CccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCccee----cCCCCCCCCCCcEecccceEEEEECCCCCCCCEEEEe
Confidence            56799999998632         1235699999999997    4567999999998754332222221 2221111    


Q ss_pred             ----------------------------------------------------------EEEEEecccccCCCEEEEcCcc
Q 014884          295 ----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAG  316 (416)
Q Consensus       295 ----------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~G  316 (416)
                                                                                .++|.||+|+++|++++|+|+|
T Consensus       236 g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~~~~i~g~G  315 (354)
T TIGR02349       236 GKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGDVKLKIPAGTQSGTVFRLKGKG  315 (354)
T ss_pred             cCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCceEEEEECCcccCCcEEEECCCC
Confidence                                                                      5789999999999999999999


Q ss_pred             CCCCCCCCCccEEEEEEEEeCCCcCCCCCc
Q 014884          317 NAGGRGRQHGNLFIKLKVADDPIFSRDGAD  346 (416)
Q Consensus       317 ~~~~~g~~~GDl~v~i~v~~h~~f~r~G~D  346 (416)
                      ++...+..+|||||+|+|..++.++.+..+
T Consensus       316 ~p~~~~~~~GDL~i~~~v~~P~~l~~~~~~  345 (354)
T TIGR02349       316 VPRLRGNGRGDLLVTVKVETPKNLSKEQKE  345 (354)
T ss_pred             cCCCCCCCCCCEEEEEEEECCCCCCHHHHH
Confidence            986655578999999999988777665544

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14278 chaperone protein DnaJ; Provisional

Probab=99.28  E-value=1.9e-11  Score=122.64  Aligned_cols=127  Identities=30%  Similarity=0.555  Sum_probs=89.2

Q ss_pred             EEEEeeeeecccCcceee--eeeeeeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceE
Q 014884          207 VELVLSFAEAAKGCTKHV--SFDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR  275 (416)
Q Consensus       207 ~~l~isl~e~~~G~~~~~--~~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~  275 (416)
                      .++.++-...+..|...-  .-.....|+.|+|+|....         ....+|+.|+|.|.+    +...|..|.|.|.
T Consensus       132 ~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~  207 (378)
T PRK14278        132 KQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEV----IPDPCHECAGDGR  207 (378)
T ss_pred             EEEEEEeeccCCCCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCcccee----eCCCCCCCCCcee
Confidence            344455555444333221  1223568999999997421         125689999999998    4567999999998


Q ss_pred             EeeeeeeEeeCC-cEEeceE------------------------------------------------------------
Q 014884          276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------  294 (416)
Q Consensus       276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------  294 (416)
                      +.+..-..+..+ |+..+++                                                            
T Consensus       208 v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tl  287 (378)
T PRK14278        208 VRARREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAI  287 (378)
T ss_pred             EecceEEEEEECCCCCCCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecC
Confidence            765444444432 3333222                                                            


Q ss_pred             ---EEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeC
Q 014884          295 ---EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADD  337 (416)
Q Consensus       295 ---~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h  337 (416)
                         .++|.||+|+++|++++|+|+|.+...+...|||||+|+|.-.
T Consensus       288 d~~~i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V~~~V~~P  333 (378)
T PRK14278        288 LDGPSEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHAHVEVVVP  333 (378)
T ss_pred             CCCeEEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEEcC
Confidence               6789999999999999999999986555568999999999843

>PRK14279 chaperone protein DnaJ; Provisional

Probab=99.27  E-value=2.8e-11  Score=121.96  Aligned_cols=127  Identities=28%  Similarity=0.552  Sum_probs=89.7

Q ss_pred             EEEeeeeecccCcceeee--eeeeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeee
Q 014884          208 ELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH  280 (416)
Q Consensus       208 ~l~isl~e~~~G~~~~~~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~  280 (416)
                      ++.++-...+.-|...-.  -.....|+.|+|+|....     ....+|+.|+|+|.+    +...|..|.|.|.+.+..
T Consensus       167 ~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----i~~~C~~C~G~g~v~~~~  242 (392)
T PRK14279        167 PLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSI----IEDPCEECKGTGVTTRTR  242 (392)
T ss_pred             EEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEecceEEEEecCCCCceeEE----eCCcCCCCCCCeEEEEee
Confidence            444555555443332221  124578999999997532     235799999999998    457899999999886544


Q ss_pred             eeEeeCC-cEEeceE--------------------------------------------------------------EEE
Q 014884          281 CMTCKGS-GVVDGVK--------------------------------------------------------------EVK  297 (416)
Q Consensus       281 C~~C~g~-G~~~~~~--------------------------------------------------------------~l~  297 (416)
                      -.+...+ |+..+++                                                              .++
T Consensus       243 ~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~i~  322 (392)
T PRK14279        243 TINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPVG  322 (392)
T ss_pred             eeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCceEE
Confidence            4444432 3332222                                                              678


Q ss_pred             EEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCC
Q 014884          298 VTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPI  339 (416)
Q Consensus       298 V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~  339 (416)
                      |.||+|+++|++|+|+|+|++.. +...|||||+|+|.-+..
T Consensus       323 v~Ip~g~~~g~~iri~g~G~p~~-~~~~GDL~I~~~v~~P~~  363 (392)
T PRK14279        323 VKVPAGTADGRILRVRGRGVPKR-SGGAGDLLVTVKVAVPPN  363 (392)
T ss_pred             EEECCCCCCCCEEEECCCCCCCC-CCCCCCEEEEEEEECCCC
Confidence            99999999999999999999863 456899999999995543

>PRK14281 chaperone protein DnaJ; Provisional

Probab=99.26  E-value=3.3e-11  Score=121.69  Aligned_cols=107  Identities=33%  Similarity=0.605  Sum_probs=82.3

Q ss_pred             eeeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE---
Q 014884          228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---  294 (416)
Q Consensus       228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~---  294 (416)
                      ....|+.|+|+|....         ....+|+.|+|.|.+    +...|..|+|.|.+.+..-..+..+ |+.++++   
T Consensus       178 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~  253 (397)
T PRK14281        178 ATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRV----VKDRCPACYGEGIKQGEVTVKVTVPAGVQDGNYLTL  253 (397)
T ss_pred             CCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeee----eCCCCCCCCCCccEecceEEEEecCCCCCCCCEEEE
Confidence            4568999999997421         125689999999998    4568999999999866544455443 4333332   


Q ss_pred             -----------------------------------------------------------EEEEEecccccCCCEEEEcCc
Q 014884          295 -----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEA  315 (416)
Q Consensus       295 -----------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~  315 (416)
                                                                                 .++|.||+|+++|++++|+|+
T Consensus       254 ~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~g~~~G~~~ri~g~  333 (397)
T PRK14281        254 RGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGAVKLTIPAGTQPETMLRIPGK  333 (397)
T ss_pred             ecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCccEEEEeCCccCCCcEEEEcCC
Confidence                                                                       578999999999999999999


Q ss_pred             cCCCCCCCCCccEEEEEEEEeCC
Q 014884          316 GNAGGRGRQHGNLFIKLKVADDP  338 (416)
Q Consensus       316 G~~~~~g~~~GDl~v~i~v~~h~  338 (416)
                      |.+...+...|||||+|+|.-..
T Consensus       334 G~P~~~~~~~GDL~V~~~V~~P~  356 (397)
T PRK14281        334 GIGHLRGSGRGDQYVRVNVFVPK  356 (397)
T ss_pred             CCCCCCCCCCCCEEEEEEEEcCC
Confidence            99865555679999999998443

>PRK14280 chaperone protein DnaJ; Provisional

Probab=99.26  E-value=3.5e-11  Score=120.74  Aligned_cols=108  Identities=29%  Similarity=0.613  Sum_probs=81.7

Q ss_pred             eeeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE---
Q 014884          228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---  294 (416)
Q Consensus       228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~---  294 (416)
                      ....|+.|+|+|....         ....+|+.|+|.|.+    +...|..|+|.|.+.+..-..+..+ |+..+.+   
T Consensus       159 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~i~l  234 (376)
T PRK14280        159 SKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQE----IKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRV  234 (376)
T ss_pred             CCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCce----ecCCCCCCCCceEEEEEEEEEEEeCCCCcCCcEEEE
Confidence            3567999999996421         135689999999987    4577999999998865444444332 3333222   


Q ss_pred             -----------------------------------------------------------EEEEEecccccCCCEEEEcCc
Q 014884          295 -----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEA  315 (416)
Q Consensus       295 -----------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~  315 (416)
                                                                                 .++|.||+|+++|++++|+|+
T Consensus       235 ~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~g~~~g~~~~i~g~  314 (376)
T PRK14280        235 SGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGKVKLKIPAGTQTGTQFRLKGK  314 (376)
T ss_pred             cccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCceEEEEECCCCCCCcEEEEcCC
Confidence                                                                       678999999999999999999


Q ss_pred             cCCCCCCCCCccEEEEEEEEeCCC
Q 014884          316 GNAGGRGRQHGNLFIKLKVADDPI  339 (416)
Q Consensus       316 G~~~~~g~~~GDl~v~i~v~~h~~  339 (416)
                      |.+...+...|||||+|+|.....
T Consensus       315 G~p~~~~~~~GDL~v~~~v~~P~~  338 (376)
T PRK14280        315 GVPNVRGYGQGDQYVVVRVVTPTK  338 (376)
T ss_pred             CCCCCCCCCCCCEEEEEEEECCCC
Confidence            998654556799999999995543

>PRK14276 chaperone protein DnaJ; Provisional

Probab=99.25  E-value=2.6e-11  Score=121.84  Aligned_cols=107  Identities=29%  Similarity=0.633  Sum_probs=82.9

Q ss_pred             eeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE----
Q 014884          229 FVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK----  294 (416)
Q Consensus       229 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~----  294 (416)
                      ...|+.|+|+|....         ....+|+.|+|.|.+    +...|..|.|.|.+.+..-..+..+ |+..+.+    
T Consensus       163 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~  238 (380)
T PRK14276        163 PVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKE----IKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIRLQ  238 (380)
T ss_pred             CccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCcc----ccCCCCCCCCceEEEEEEEEEEEeCCCccCCcEEEEe
Confidence            468999999997421         125689999999987    4578999999999866555555543 4433333    


Q ss_pred             ----------------------------------------------------------EEEEEecccccCCCEEEEcCcc
Q 014884          295 ----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAG  316 (416)
Q Consensus       295 ----------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~G  316 (416)
                                                                                .++|.||+|+++|++++|+|+|
T Consensus       239 G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~i~v~ip~g~~~g~~~~i~g~G  318 (380)
T PRK14276        239 GQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGDVELKIPAGTQTGKKFRLRGKG  318 (380)
T ss_pred             ccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCcEEEEECCCCCCCCEEEECCCC
Confidence                                                                      5789999999999999999999


Q ss_pred             CCCCCCCCCccEEEEEEEEeCCC
Q 014884          317 NAGGRGRQHGNLFIKLKVADDPI  339 (416)
Q Consensus       317 ~~~~~g~~~GDl~v~i~v~~h~~  339 (416)
                      .+...+..+|||||+|+|.-...
T Consensus       319 ~p~~~~~~~GDL~V~~~v~~P~~  341 (380)
T PRK14276        319 APKLRGGGNGDQHVTVNIVTPTK  341 (380)
T ss_pred             cCCCCCCCCCCEEEEEEEECCCC
Confidence            98755556799999999995443

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=99.25  E-value=7.4e-12  Score=119.50  Aligned_cols=59  Identities=39%  Similarity=0.605  Sum_probs=52.3

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---C----hhHHHHHHHHHHHHHHhhh
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN---N----PSAKRKFQEIRDAYETLRD  137 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~---~----~~a~~~f~~i~~Ay~~L~d  137 (416)
                      +...++|+||||++++|.+|||+|||+|+++||||+..+   +    +.|+++|++|++||++|+.
T Consensus       197 ~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~  262 (267)
T PRK09430        197 PTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK  262 (267)
T ss_pred             CcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence            345799999999999999999999999999999999643   1    3488999999999999986

>PRK14286 chaperone protein DnaJ; Provisional

Probab=99.25  E-value=1.7e-11  Score=122.79  Aligned_cols=130  Identities=25%  Similarity=0.457  Sum_probs=88.4

Q ss_pred             EEEeeeeecccCcceee--eeeeeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeee
Q 014884          208 ELVLSFAEAAKGCTKHV--SFDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH  280 (416)
Q Consensus       208 ~l~isl~e~~~G~~~~~--~~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~  280 (416)
                      ++.++....+..|...-  .-.....|+.|+|+|....     .....|+.|+|+|.+    +...|..|+|.|.+.+..
T Consensus       144 ~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~~~~~~  219 (372)
T PRK14286        144 KIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTV----ISNPCKTCGGQGLQEKRR  219 (372)
T ss_pred             EEEeeccccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeE----ecccCCCCCCCcEEecce
Confidence            44454444443333221  1123467999999996421     235689999999998    456899999999876543


Q ss_pred             eeEeeCC-cEEeceE---------------------------------------------------------------EE
Q 014884          281 CMTCKGS-GVVDGVK---------------------------------------------------------------EV  296 (416)
Q Consensus       281 C~~C~g~-G~~~~~~---------------------------------------------------------------~l  296 (416)
                      -..+..+ |+..+.+                                                               .+
T Consensus       220 ~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i  299 (372)
T PRK14286        220 TINIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKA  299 (372)
T ss_pred             EEEEEECCCCCCCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEE
Confidence            3333322 2221111                                                               58


Q ss_pred             EEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcC
Q 014884          297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFS  341 (416)
Q Consensus       297 ~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~  341 (416)
                      +|.||+|+++|++++|+|+|.+...+...|||||+|+|.-+..+.
T Consensus       300 ~v~ip~g~~~g~~~ri~G~G~P~~~~~~~GDL~V~~~V~~P~~Ls  344 (372)
T PRK14286        300 KMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVIVKIEIPKKIT  344 (372)
T ss_pred             EEEeCCccCCCcEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCC
Confidence            999999999999999999999865545679999999999555443

>PRK14293 chaperone protein DnaJ; Provisional

Probab=99.23  E-value=2.2e-11  Score=122.17  Aligned_cols=118  Identities=25%  Similarity=0.468  Sum_probs=87.9

Q ss_pred             eeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE----
Q 014884          229 FVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK----  294 (416)
Q Consensus       229 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~----  294 (416)
                      ...|+.|+|+|....         .....|+.|.|.|.+    +...|..|.|.|.+.+..-..+..+ |+..+++    
T Consensus       160 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~  235 (374)
T PRK14293        160 PTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQV----IEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVS  235 (374)
T ss_pred             CeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeE----eccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEc
Confidence            467999999997421         124689999999997    4568999999998754333333321 2221111    


Q ss_pred             ----------------------------------------------------------EEEEEecccccCCCEEEEcCcc
Q 014884          295 ----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAG  316 (416)
Q Consensus       295 ----------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~G  316 (416)
                                                                                .++|.||+|+++|++++|+|+|
T Consensus       236 g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~~~i~ip~~~~~g~~~ri~g~G  315 (374)
T PRK14293        236 GEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVELTIPAGTQPNTVLTLENKG  315 (374)
T ss_pred             cCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCCEEEEeCCCCCCCCEEEECCCC
Confidence                                                                      5789999999999999999999


Q ss_pred             CCCCCC-CCCccEEEEEEEEeCCCcCCCCCceEEE
Q 014884          317 NAGGRG-RQHGNLFIKLKVADDPIFSRDGADVYVD  350 (416)
Q Consensus       317 ~~~~~g-~~~GDl~v~i~v~~h~~f~r~G~DL~~~  350 (416)
                      .+...+ ...|||||+|+|..++.+++++.+|+..
T Consensus       316 ~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~  350 (374)
T PRK14293        316 VPRLGNPVARGDHLITVKVKIPTRISDEERELLEK  350 (374)
T ss_pred             CCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            986543 2479999999999888888888776544

>PRK14297 chaperone protein DnaJ; Provisional

Probab=99.23  E-value=5.8e-11  Score=119.37  Aligned_cols=106  Identities=29%  Similarity=0.564  Sum_probs=83.3

Q ss_pred             eeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE----
Q 014884          229 FVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK----  294 (416)
Q Consensus       229 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~----  294 (416)
                      ...|+.|+|+|....         ....+|+.|+|.|.+    +...|..|+|.|.+.+..-.....+ |+..+.+    
T Consensus       165 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~I~l~  240 (380)
T PRK14297        165 PKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKV----IEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPLR  240 (380)
T ss_pred             CccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceE----cCCCCCCCCCCeEEEeEeEEEEEeCCCCCCCcEEEEe
Confidence            568999999996421         235699999999987    4578999999998766555565554 4443333    


Q ss_pred             ----------------------------------------------------------EEEEEecccccCCCEEEEcCcc
Q 014884          295 ----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAG  316 (416)
Q Consensus       295 ----------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~G  316 (416)
                                                                                .++|.||+|+++|++++|+|+|
T Consensus       241 g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~~~v~ip~g~~~g~~~ri~g~G  320 (380)
T PRK14297        241 GQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGEVKYEVPAGTQPGTVFRLKGKG  320 (380)
T ss_pred             cCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCcEEEEECCCcCCCCEEEEcCCC
Confidence                                                                      6789999999999999999999


Q ss_pred             CCCCCCCCCccEEEEEEEEeCC
Q 014884          317 NAGGRGRQHGNLFIKLKVADDP  338 (416)
Q Consensus       317 ~~~~~g~~~GDl~v~i~v~~h~  338 (416)
                      .+...+...|||||+|+|.-..
T Consensus       321 ~p~~~~~~~GDL~v~~~v~~P~  342 (380)
T PRK14297        321 VPRVNSTGRGNQYVTVIVDIPK  342 (380)
T ss_pred             cCCCCCCCCCcEEEEEEEEcCC
Confidence            9865555679999999999433

>PRK14292 chaperone protein DnaJ; Provisional

Probab=99.22  E-value=5.7e-11  Score=119.13  Aligned_cols=113  Identities=27%  Similarity=0.574  Sum_probs=84.7

Q ss_pred             eeeecCCCCCCCCCCCC---------cccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE---
Q 014884          228 AFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---  294 (416)
Q Consensus       228 ~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~---  294 (416)
                      ....|..|+|+|.....         ....|+.|+|.|..    +...|..|.|.|.+.+..-..+..+ |+..+.+   
T Consensus       156 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~  231 (371)
T PRK14292        156 PPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQI----ITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRV  231 (371)
T ss_pred             CCccCCCCCCccEEEEEEeccCceEEEeeecCCCccccee----cCCCCCCCCCceEEeecceEEEEECCCCCCCcEEEE
Confidence            36789999999965311         24689999999987    5688999999998754333333332 3222221   


Q ss_pred             ---------------------------------------------------------EEEEEecccccCCCEEEEcCccC
Q 014884          295 ---------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAGN  317 (416)
Q Consensus       295 ---------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~G~  317 (416)
                                                                               .++|.||+|+++|++++|+|+|.
T Consensus       232 ~G~G~~~~~~~GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~i~g~G~  311 (371)
T PRK14292        232 AGMGNEGPGGNGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQVIEVKPGTQHGDLHRLRGQGM  311 (371)
T ss_pred             ecCcCCCCCCCCCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCCEEEecCCCcCCCcEEEECCCCC
Confidence                                                                     35799999999999999999999


Q ss_pred             CCCCCCCCccEEEEEEEEeCCCcCCCC
Q 014884          318 AGGRGRQHGNLFIKLKVADDPIFSRDG  344 (416)
Q Consensus       318 ~~~~g~~~GDl~v~i~v~~h~~f~r~G  344 (416)
                      +...+..+|||||+|+|+.++.+..+-
T Consensus       312 p~~~~~~~GDL~V~~~v~~P~~l~~~q  338 (371)
T PRK14292        312 PRLQGAGTGDLIVEYEIAVPKQLSPEA  338 (371)
T ss_pred             CCCCCCCCCCEEEEEEEECCCCCCHHH
Confidence            876566689999999999887765544

>PRK14289 chaperone protein DnaJ; Provisional

Probab=99.22  E-value=4.1e-11  Score=120.78  Aligned_cols=126  Identities=25%  Similarity=0.516  Sum_probs=89.7

Q ss_pred             EEEEeeeeecccCcceeee--eeeeeecCCCCCCCCCCCC---------cccccCCCcceeEEEeCCCcccCCCCCCceE
Q 014884          207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGR  275 (416)
Q Consensus       207 ~~l~isl~e~~~G~~~~~~--~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~  275 (416)
                      .++.++-...+..|...-.  -.....|+.|+|+|.....         ....|+.|.|.|.+    ....|..|+|.|.
T Consensus       147 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~  222 (386)
T PRK14289        147 KKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKI----IKKKCKKCGGEGI  222 (386)
T ss_pred             EEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccc----cCcCCCCCCCCcE
Confidence            3445555555544433322  2345789999999975321         25689999999987    4578999999998


Q ss_pred             EeeeeeeEeeCC-cEEeceE------------------------------------------------------------
Q 014884          276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------  294 (416)
Q Consensus       276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------  294 (416)
                      +.+..-..+..+ |+..+.+                                                            
T Consensus       223 v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~l  302 (386)
T PRK14289        223 VYGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTI  302 (386)
T ss_pred             EeeeEEEEEEeCCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecC
Confidence            765444444332 3322222                                                            


Q ss_pred             --EEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEe
Q 014884          295 --EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVAD  336 (416)
Q Consensus       295 --~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~  336 (416)
                        .++|.||+|+++|++++|+|+|.+...+...|||||+|+|+-
T Consensus       303 dg~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~  346 (386)
T PRK14289        303 DGKAKVKIEAGTQPGKVLRLRNKGLPSVNGYGTGDLLVNVSVYI  346 (386)
T ss_pred             CceEEEEECCccCCCcEEEECCCCcCCCCCCCCCcEEEEEEEEe
Confidence              689999999999999999999998655556899999999983

>PRK14295 chaperone protein DnaJ; Provisional

Probab=99.21  E-value=6.3e-11  Score=119.29  Aligned_cols=125  Identities=27%  Similarity=0.530  Sum_probs=87.9

Q ss_pred             EEEeeeeecccCcceeee--eeeeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeee
Q 014884          208 ELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH  280 (416)
Q Consensus       208 ~l~isl~e~~~G~~~~~~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~  280 (416)
                      ++.++-...+.-|...-.  -.....|+.|+|+|....     ....+|+.|+|+|.+    +...|..|.|.|.+.+..
T Consensus       160 ~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~~~~~~  235 (389)
T PRK14295        160 PLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLI----ADDPCLVCKGSGRAKSSR  235 (389)
T ss_pred             EEEeeccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceEEEEecCCCcceeEE----eccCCCCCCCCceEeeee
Confidence            444444444443332221  123478999999986421     235689999999998    457899999999886544


Q ss_pred             eeEeeCC-cEEeceE---------------------------------------------------------------EE
Q 014884          281 CMTCKGS-GVVDGVK---------------------------------------------------------------EV  296 (416)
Q Consensus       281 C~~C~g~-G~~~~~~---------------------------------------------------------------~l  296 (416)
                      -.+...+ |+..+++                                                               .+
T Consensus       236 ~l~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~~  315 (389)
T PRK14295        236 TMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPV  315 (389)
T ss_pred             EEEEEeCCCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCEE
Confidence            4444432 3333222                                                               68


Q ss_pred             EEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeC
Q 014884          297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADD  337 (416)
Q Consensus       297 ~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h  337 (416)
                      +|.||+|+++|++|+|+|+|.+.. +...|||||+|+|.-.
T Consensus       316 ~v~ip~g~~~g~~iri~G~G~p~~-~~~~GDL~i~~~v~~P  355 (389)
T PRK14295        316 TVKLPPGTPNGRVLRVRGKGAVRK-DGTRGDLLVTVEVAVP  355 (389)
T ss_pred             EEEECCccCCCcEEEECCCCcCCC-CCCCCCEEEEEEEECC
Confidence            999999999999999999999863 4568999999999843

>PRK14277 chaperone protein DnaJ; Provisional

Probab=99.21  E-value=9e-11  Score=118.16  Aligned_cols=106  Identities=32%  Similarity=0.654  Sum_probs=80.7

Q ss_pred             eeeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE---
Q 014884          228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---  294 (416)
Q Consensus       228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~---  294 (416)
                      ....|+.|+|+|....         ....+|+.|+|.|.+    +...|..|+|.|.+.+..-.++..+ |+..+.+   
T Consensus       171 ~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~  246 (386)
T PRK14277        171 KPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKI----ITDPCNKCGGTGRIRRRRKIKVNIPAGIDDGQMITL  246 (386)
T ss_pred             CCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceee----ccCCCCCCCCCcEEeeeeEEEEecCCCccCCcEEEE
Confidence            3568999999986421         124689999999998    4578999999999865544455433 3333222   


Q ss_pred             -----------------------------------------------------------EEEEEecccccCCCEEEEcCc
Q 014884          295 -----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEA  315 (416)
Q Consensus       295 -----------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~  315 (416)
                                                                                 .++|.||+|+++|++++|+|+
T Consensus       247 ~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~ri~g~  326 (386)
T PRK14277        247 RGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGKVKFTIPEGTQTGTKFRLRGK  326 (386)
T ss_pred             ccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCCEEEEECCCCCCCCEEEECCC
Confidence                                                                       468899999999999999999


Q ss_pred             cCCCCCCCCCccEEEEEEEEeC
Q 014884          316 GNAGGRGRQHGNLFIKLKVADD  337 (416)
Q Consensus       316 G~~~~~g~~~GDl~v~i~v~~h  337 (416)
                      |.+...+...|||||+|+|.-.
T Consensus       327 G~p~~~~~~~GDL~v~~~V~~P  348 (386)
T PRK14277        327 GIPHLRGRGRGDQIVKVYIEVP  348 (386)
T ss_pred             CCCCCCCCCCCCEEEEEEEEeC
Confidence            9986544567999999999843

>PRK14291 chaperone protein DnaJ; Provisional

Probab=99.20  E-value=7.5e-11  Score=118.58  Aligned_cols=126  Identities=30%  Similarity=0.545  Sum_probs=89.1

Q ss_pred             EEEEeeeeecccCcceee--eeeeeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeee
Q 014884          207 VELVLSFAEAAKGCTKHV--SFDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD  279 (416)
Q Consensus       207 ~~l~isl~e~~~G~~~~~--~~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~  279 (416)
                      .++.++-...+..|...-  .-.....|+.|+|+|....     ....+|+.|+|.|.+     ...|..|+|.|.+.+.
T Consensus       149 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~-----~~~C~~C~G~g~v~~~  223 (382)
T PRK14291        149 VSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGVL-----REPCSKCNGRGLVIKK  223 (382)
T ss_pred             EEEEEeeeccCCCCccccCCCCCCCccCCCCCCceEEEEecceEEEEecCCCCCCceEE-----ccCCCCCCCCceEEee
Confidence            344444454444333221  1233567999999996421     235689999999953     5689999999988665


Q ss_pred             eeeEeeCC-cEEeceE---------------------------------------------------------------E
Q 014884          280 HCMTCKGS-GVVDGVK---------------------------------------------------------------E  295 (416)
Q Consensus       280 ~C~~C~g~-G~~~~~~---------------------------------------------------------------~  295 (416)
                      .-.+...+ |+.++++                                                               .
T Consensus       224 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~  303 (382)
T PRK14291        224 ETIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKK  303 (382)
T ss_pred             eEEEEEeCCCCCCCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCE
Confidence            55555443 4433332                                                               6


Q ss_pred             EEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeC
Q 014884          296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADD  337 (416)
Q Consensus       296 l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h  337 (416)
                      ++|.||+|+++|++|+|+|+|++...+..+|||||+|+|.-.
T Consensus       304 l~V~Ip~g~~~G~~i~i~G~G~p~~~~~~~GDL~V~~~V~~P  345 (382)
T PRK14291        304 EKVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVVRVHIDVP  345 (382)
T ss_pred             EEEEECCccCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeC
Confidence            899999999999999999999987655568999999999843

>PRK14296 chaperone protein DnaJ; Provisional

Probab=99.20  E-value=8.3e-11  Score=117.74  Aligned_cols=128  Identities=20%  Similarity=0.481  Sum_probs=87.8

Q ss_pred             EEEEeeeeecccCcceeee--eeeeeecCCCCCCCCCCCC---------cccccCCCcceeEEEeCCCcccCCCCCCceE
Q 014884          207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGR  275 (416)
Q Consensus       207 ~~l~isl~e~~~G~~~~~~--~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~  275 (416)
                      ..+.++-...+..|...-.  -.....|+.|+|+|.....         ...+|+.|+|+|.+    +...|..|.|.|.
T Consensus       142 ~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~----~~~~C~~C~G~g~  217 (372)
T PRK14296        142 KIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKI----IKNKCKNCKGKGK  217 (372)
T ss_pred             EEEEEeeeeccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCccee----ecccccCCCCceE
Confidence            3444444444444433221  1235679999999975321         24689999999998    4678999999998


Q ss_pred             EeeeeeeEeeCC-cEEeceE------------------------------------------------------------
Q 014884          276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------  294 (416)
Q Consensus       276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------  294 (416)
                      +.+..-.++..+ |+..+.+                                                            
T Consensus       218 v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~t  297 (372)
T PRK14296        218 YLERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKT  297 (372)
T ss_pred             EEEEEEEEEEECCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeC
Confidence            755444444332 3332222                                                            


Q ss_pred             ---EEEEEecccccCCCEEEEcCccCCCC-CCCCCccEEEEEEEEeCC
Q 014884          295 ---EVKVTIPAGVDSGDTIRVPEAGNAGG-RGRQHGNLFIKLKVADDP  338 (416)
Q Consensus       295 ---~l~V~Ip~G~~~G~~i~~~g~G~~~~-~g~~~GDl~v~i~v~~h~  338 (416)
                         .++|.||+|+++|++++|+|+|.+.. .+...|||||+|+|.-..
T Consensus       298 ldG~~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~  345 (372)
T PRK14296        298 LDGDIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPK  345 (372)
T ss_pred             CCCCEEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCC
Confidence               67899999999999999999999733 233579999999999433

>PHA02624 large T antigen; Provisional

Probab=99.19  E-value=1.6e-11  Score=126.67  Aligned_cols=60  Identities=28%  Similarity=0.557  Sum_probs=56.2

Q ss_pred             cCCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhh
Q 014884           81 KRDPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY  144 (416)
Q Consensus        81 ~~~~y~iLgv~~~a--~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~y  144 (416)
                      ..++|++|||+++|  +.+|||+|||++|++||||++++    +++|++|++||++|+|+.+|..|
T Consensus        10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd----eekfk~Ln~AYevL~d~~k~~r~   71 (647)
T PHA02624         10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD----EEKMKRLNSLYKKLQEGVKSARQ   71 (647)
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc----HHHHHHHHHHHHHHhcHHHhhhc
Confidence            36899999999999  99999999999999999999753    58999999999999999999998

>PRK14283 chaperone protein DnaJ; Provisional

Probab=99.18  E-value=1.3e-10  Score=116.85  Aligned_cols=105  Identities=32%  Similarity=0.649  Sum_probs=78.6

Q ss_pred             eeeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE---
Q 014884          228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---  294 (416)
Q Consensus       228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~---  294 (416)
                      ....|+.|+|+|....         ....+|+.|.|.|..    ....|..|.|.|.+.+..-..+..+ |+..+.+   
T Consensus       162 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l  237 (378)
T PRK14283        162 EVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKI----VEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRV  237 (378)
T ss_pred             CCccCCCcCCccEEEEEEeccCceEEEEEECCCCCcccee----cCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEE
Confidence            3467999999997531         124689999999987    4578999999998765444444332 2211111   


Q ss_pred             -----------------------------------------------------------EEEEEecccccCCCEEEEcCc
Q 014884          295 -----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEA  315 (416)
Q Consensus       295 -----------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~  315 (416)
                                                                                 .++|.||+|+++|++++|+|+
T Consensus       238 ~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~~ri~g~  317 (378)
T PRK14283        238 SGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVELKIPAGTQSGTTFRLKGH  317 (378)
T ss_pred             eccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCceEEEEeCCCCCCCCEEEECCC
Confidence                                                                       578999999999999999999


Q ss_pred             cCCCCCCCCCccEEEEEEEEe
Q 014884          316 GNAGGRGRQHGNLFIKLKVAD  336 (416)
Q Consensus       316 G~~~~~g~~~GDl~v~i~v~~  336 (416)
                      |.+...+...|||||+|+|.-
T Consensus       318 G~p~~~~~~~GdL~v~~~v~~  338 (378)
T PRK14283        318 GMPSLRWSGKGNLYVKVKVVV  338 (378)
T ss_pred             CCCCCCCCCCCCEEEEEEEEe
Confidence            998654456799999999983

>PRK01773 hscB co-chaperone HscB; Provisional

Probab=99.18  E-value=4.1e-11  Score=106.65  Aligned_cols=67  Identities=27%  Similarity=0.421  Sum_probs=58.1

Q ss_pred             CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 014884           82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRR  148 (416)
Q Consensus        82 ~~~y~iLgv~~~--a~~~eik~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~~L~d~~~r~~yd~~~  148 (416)
                      .|||++||+++.  .+..+++++|++|++++|||+..+.++     +.+.-..||+||.+|+||.+|+.|=-..
T Consensus         2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L   75 (173)
T PRK01773          2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAIIAL   75 (173)
T ss_pred             CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHh
Confidence            589999999985  899999999999999999999876543     4455678999999999999999996543

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=99.15  E-value=1.8e-10  Score=116.60  Aligned_cols=108  Identities=27%  Similarity=0.565  Sum_probs=83.2

Q ss_pred             eeeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE---
Q 014884          228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---  294 (416)
Q Consensus       228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~---  294 (416)
                      ....|+.|+|+|....         ....+|+.|+|+|.+..  ....|..|+|.|.+.+..-.++..+ |+.++.+   
T Consensus       165 ~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~--~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~~  242 (421)
T PTZ00037        165 AFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIP--ESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITF  242 (421)
T ss_pred             CCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceecc--ccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEEE
Confidence            4578999999996321         23568999999998742  2468999999999876655666554 5554443   


Q ss_pred             -----------------------------------------------------------EEEEEeccc--ccCCCEEEEc
Q 014884          295 -----------------------------------------------------------EVKVTIPAG--VDSGDTIRVP  313 (416)
Q Consensus       295 -----------------------------------------------------------~l~V~Ip~G--~~~G~~i~~~  313 (416)
                                                                                 .++|.||||  +++|++++|+
T Consensus       243 ~G~Gd~~~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~I~  322 (421)
T PTZ00037        243 HGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVIN  322 (421)
T ss_pred             ecccCCCCCCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCCcccCCCcEEEeC
Confidence                                                                       689999999  9999999999


Q ss_pred             CccCCCCCC-CCCccEEEEEEEEeC
Q 014884          314 EAGNAGGRG-RQHGNLFIKLKVADD  337 (416)
Q Consensus       314 g~G~~~~~g-~~~GDl~v~i~v~~h  337 (416)
                      |+|.+...+ ...|||||+|+|.-.
T Consensus       323 geGmP~~~~~~~rGDL~V~~~V~~P  347 (421)
T PTZ00037        323 NEGMPTYKSPFKKGNLYVTFEVIFP  347 (421)
T ss_pred             CCCcccCCCCCCCCCEEEEEEEEcC
Confidence            999986443 357999999999843

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=99.09  E-value=4.1e-11  Score=89.75  Aligned_cols=57  Identities=49%  Similarity=1.036  Sum_probs=44.5

Q ss_pred             cCCCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEe-eeeeeEeeCCc
Q 014884          232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRII-KDHCMTCKGSG  288 (416)
Q Consensus       232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~-~~~C~~C~g~G  288 (416)
                      |+.|+|+|........+|+.|+|+|+++..        .++++|+.|+|+|+++ +++|+.|+|.|
T Consensus         1 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i~~~~C~~C~G~g   66 (66)
T PF00684_consen    1 CPKCNGTGAKPGKKPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKIIEKDPCKTCKGSG   66 (66)
T ss_dssp             -CCCTTTSB-STTT-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE-TSSB-SSSTTSS
T ss_pred             CCcCCCcccCCCCCCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEECCCCCCCCCCcC
Confidence            899999999888899999999999997642        2378999999999999 99999999975

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=99.08  E-value=9.3e-11  Score=114.76  Aligned_cols=70  Identities=33%  Similarity=0.640  Sum_probs=63.7

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----ChhHHHHHHHHHHHHHHhhhhhhhhhhcccccC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN-----NPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSR  150 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~-----~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~  150 (416)
                      .-|+|||||++.+++..+||++||+|..++||||.+.     ..+-+|++++|++||+.|+|...|+.|-.+|..
T Consensus        97 ~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtP  171 (610)
T COG5407          97 GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTP  171 (610)
T ss_pred             CCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCC
Confidence            3599999999999999999999999999999999775     245789999999999999999999999998643

>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB

Probab=99.04  E-value=3.1e-10  Score=99.78  Aligned_cols=57  Identities=26%  Similarity=0.435  Sum_probs=49.0

Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCCCCCh-----hHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 014884           93 NASQDEIKKAFHMLAKQYHPDANKNNP-----SAKRKFQEIRDAYETLRDSEKRAQYDRRRS  149 (416)
Q Consensus        93 ~a~~~eik~ayr~la~~~HPD~~~~~~-----~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~  149 (416)
                      +.+..+|+++||+|++++|||+..+..     .+.+.|+.||+||++|+||.+|+.|+-...
T Consensus         2 ~iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~   63 (157)
T TIGR00714         2 QLDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLH   63 (157)
T ss_pred             CCCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence            357889999999999999999965432     267889999999999999999999998643

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.

>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.87  E-value=2.2e-09  Score=94.71  Aligned_cols=66  Identities=26%  Similarity=0.540  Sum_probs=59.5

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhhhhhhhhhhcc
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDR  146 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~  146 (416)
                      .-|+|+||.|.++.+.++||+.||+|....|||+|+++ +.|...|.-|.+||..|-|+..|..-+.
T Consensus        52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~~  118 (250)
T KOG1150|consen   52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRCLD  118 (250)
T ss_pred             ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            46999999999999999999999999999999999988 5689999999999999999986654444

>PRK14299 chaperone protein DnaJ; Provisional

Probab=98.81  E-value=1.5e-08  Score=98.38  Aligned_cols=66  Identities=35%  Similarity=0.630  Sum_probs=59.8

Q ss_pred             cCCCCCceEEEEecCHHHHhcCCeeEEecCCC-eEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEE
Q 014884          340 FSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVN  413 (416)
Q Consensus       340 f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg-~~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~  413 (416)
                      +.|+|.||++++.|+|.||++|+++.| ++++ .++|+||+|+++|++++++|+|++.       |||||+|+|.
T Consensus       125 ~~~~g~dl~~~l~isL~ea~~G~~~~i-~l~g~~~~V~Ip~G~~~G~~ir~~g~G~~~-------GDL~v~i~v~  191 (291)
T PRK14299        125 RARKGRDLEAELPLTLEEAYRGGEKVV-EVAGERLSVRIPPGVREGQVIRLAGKGRQG-------GDLYLVVRLL  191 (291)
T ss_pred             CCCCCCCEEEEEEecHHHHhCCCeEEE-eeCCEEEEEecCCCcCCCcEEEECCCCCCC-------CCEEEEEEEc
Confidence            357899999999999999999999998 5667 5899999999999999999999862       9999999886

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=98.72  E-value=9.4e-09  Score=94.77  Aligned_cols=73  Identities=34%  Similarity=0.428  Sum_probs=62.7

Q ss_pred             CCCCcCCcccccCCCC---CCCHHHHHHHHHHHHHHhCCCCC--CCChhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 014884           77 CYSSKRDPYELLGVPE---NASQDEIKKAFHMLAKQYHPDAN--KNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS  149 (416)
Q Consensus        77 ~~~~~~~~y~iLgv~~---~a~~~eik~ayr~la~~~HPD~~--~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~  149 (416)
                      ..+...|+|.+|||+.   .+++.+|.+|.++.+.+||||+.  +++....+.|+.|+.||+||+|+.+|.+||....
T Consensus        38 k~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~df  115 (379)
T COG5269          38 KNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSNDF  115 (379)
T ss_pred             hhhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhcccccc
Confidence            3456689999999987   68889999999999999999996  2234457899999999999999999999999643

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=98.69  E-value=5.2e-08  Score=95.29  Aligned_cols=71  Identities=25%  Similarity=0.491  Sum_probs=59.2

Q ss_pred             CCCCceEEEEecCHHHHhcCCeeEE----ecCC--C--------eEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEE
Q 014884          342 RDGADVYVDSNISFTQAILGGKVDV----PTLS--G--------KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQY  407 (416)
Q Consensus       342 r~G~DL~~~~~I~l~~Al~G~~~~i----~~ld--g--------~~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~  407 (416)
                      ++|.||++++.|+|.||+.|+.++|    ++.+  |        .++|+||+|+++|++++++|+|+|.... ..+||||
T Consensus       115 ~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDl~  193 (306)
T PRK10266        115 ARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENG-GPNGDLW  193 (306)
T ss_pred             CCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCCC-CCCccEE
Confidence            5689999999999999999996555    4343  3        3688999999999999999999996532 3469999


Q ss_pred             EEEEEE
Q 014884          408 VRFRVN  413 (416)
Q Consensus       408 v~~~v~  413 (416)
                      |+|+|.
T Consensus       194 v~i~v~  199 (306)
T PRK10266        194 LVIHIA  199 (306)
T ss_pred             EEEEEc
Confidence            999987

>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=98.63  E-value=5.8e-08  Score=75.82  Aligned_cols=45  Identities=29%  Similarity=0.608  Sum_probs=35.3

Q ss_pred             EEEEEEecccccCCCEEEEcCccCCCCCCC-CCccEEEEEEEEeCC
Q 014884          294 KEVKVTIPAGVDSGDTIRVPEAGNAGGRGR-QHGNLFIKLKVADDP  338 (416)
Q Consensus       294 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~-~~GDl~v~i~v~~h~  338 (416)
                      +.++|.||+|+++|++++++|+|.+...+. ..|||||+++|.-..
T Consensus        27 ~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~   72 (81)
T PF01556_consen   27 KTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPK   72 (81)
T ss_dssp             -EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--S
T ss_pred             CEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCC
Confidence            478899999999999999999999765554 799999999998433

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=98.33  E-value=3.1e-07  Score=75.18  Aligned_cols=56  Identities=39%  Similarity=0.901  Sum_probs=45.9

Q ss_pred             eeeecCCCCCCCCCCCCcccccCCCcceeEEEeC--C---CcccCCCCCCceEEeeeeeeEeeCCcEEec
Q 014884          228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--P---FTSTCSTCKGLGRIIKDHCMTCKGSGVVDG  292 (416)
Q Consensus       228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--~---~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~  292 (416)
                      ..+.|..|+|+|.      ..|+.|+|+|.+...  +   ++.+|+.|+|.|+.   .|..|+|.|++..
T Consensus        40 ~~v~C~~C~GsG~------~~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk~---~C~~C~G~G~~~~  100 (111)
T PLN03165         40 NTQPCFPCSGTGA------QVCRFCVGSGNVTVELGGGEKEVSKCINCDGAGSL---TCTTCQGSGIQPR  100 (111)
T ss_pred             cCCCCCCCCCCCC------cCCCCCcCcCeEEEEeCCcEEEEEECCCCCCccee---eCCCCCCCEEEee
Confidence            4578999999997      389999999997542  2   36799999999975   4999999987653

>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]

Probab=98.31  E-value=6.9e-07  Score=95.51  Aligned_cols=58  Identities=29%  Similarity=0.477  Sum_probs=48.2

Q ss_pred             CCCCcCCcccccCCCCC----CCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhh
Q 014884           77 CYSSKRDPYELLGVPEN----ASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRD  137 (416)
Q Consensus        77 ~~~~~~~~y~iLgv~~~----a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d  137 (416)
                      ..+...+.|+||.|+-+    -..+.||++|++||.+||||||+   +-.++|..+|+|||.|+.
T Consensus      1276 ~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNP---EGRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1276 ATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNP---EGREMFERVNKAYELLSS 1337 (2235)
T ss_pred             CccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCc---hHHHHHHHHHHHHHHHHH
Confidence            34556689999998752    24478999999999999999985   458999999999999983

>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.26  E-value=9.7e-07  Score=79.84  Aligned_cols=56  Identities=38%  Similarity=0.700  Sum_probs=49.8

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHH-Hhhhh
Q 014884           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYE-TLRDS  138 (416)
Q Consensus        82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~-~L~d~  138 (416)
                      ..+|.+|||..+|+.+|++.||.+||+++|||.... ....++|.+|.+||. ||+..
T Consensus        47 ~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~-~adaa~f~qideafrkvlq~~  103 (342)
T KOG0568|consen   47 MECFRILGVEEGADADEVREAFHDLAKQVHPDSGSE-EADAARFIQIDEAFRKVLQEK  103 (342)
T ss_pred             HHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCc-cccHHHHHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999864 344578999999999 88754

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.26  E-value=1.6e-06  Score=84.16  Aligned_cols=42  Identities=33%  Similarity=0.464  Sum_probs=37.2

Q ss_pred             EEEEEeccc--ccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeC
Q 014884          295 EVKVTIPAG--VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADD  337 (416)
Q Consensus       295 ~l~V~Ip~G--~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h  337 (416)
                      .+++.++||  +.+|++.++.|+|++..... .|||||.+.|+-.
T Consensus       280 ~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~-~g~lyi~~~v~fp  323 (337)
T KOG0712|consen  280 LLKLSSKPGEVISPGDTKRVEGEGMPIFRNP-KGDLYIKFEVKFP  323 (337)
T ss_pred             eEEEecCCCceeChhHEEeecCCCcccccCC-CCcEEEEEEEEcC
Confidence            788999999  99999999999999976554 9999999999843

>TIGR02642 phage_xxxx uncharacterized phage protein

Probab=98.10  E-value=2.6e-06  Score=76.35  Aligned_cols=48  Identities=35%  Similarity=0.663  Sum_probs=39.5

Q ss_pred             ccCCCCCCceEEee--eeeeEeeCCcEEeceEEEEEEecccccCCCEEEEc
Q 014884          265 STCSTCKGLGRIIK--DHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVP  313 (416)
Q Consensus       265 ~~C~~C~G~G~~~~--~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~  313 (416)
                      .+|+.|+|+|++++  ++|+.|+|.|.+..++.+.+.+ .|+.+|++|++.
T Consensus       100 ~~C~~C~G~G~~i~~~~~C~~C~G~G~v~~~~~~~~k~-~g~~~g~~it~~  149 (186)
T TIGR02642       100 CKCPRCRGTGLIQRRQRECDTCAGTGRFRPTVEDLLKS-FGVDSGAAIVLK  149 (186)
T ss_pred             CcCCCCCCeeEEecCCCCCCCCCCccEEeeeEEEEEEe-eeccCCceeeHH
Confidence            45666777777775  6788888888888899999999 999999999875

This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.

>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.97  E-value=9.8e-06  Score=64.73  Aligned_cols=59  Identities=27%  Similarity=0.360  Sum_probs=49.3

Q ss_pred             CCCCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhh
Q 014884           76 SCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS  138 (416)
Q Consensus        76 ~~~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~  138 (416)
                      .+.+..+..-.||||+++++.+.||.|+|+.....|||+.++.--|    .+||||+++|...
T Consensus        50 ~~kMsr~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSPYlA----sKINEAKdlLe~~  108 (112)
T KOG0723|consen   50 EPKMSRREAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGSPYLA----SKINEAKDLLEGT  108 (112)
T ss_pred             ccccchHHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCCHHHH----HHHHHHHHHHhcc
Confidence            3456667888999999999999999999999999999999863233    3599999999753

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=97.94  E-value=3.7e-05  Score=81.31  Aligned_cols=70  Identities=50%  Similarity=0.816  Sum_probs=65.3

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 014884           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS  152 (416)
Q Consensus        82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~  152 (416)
                      .|||+||||+++|+.++||+|||+||++||||++++ +.+.++|++|++||++|+||.+|+.||.++..|.
T Consensus         2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~   71 (871)
T TIGR03835         2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-PDAASIFAEINEANDVLSNPKKRANYDKYGHDGV   71 (871)
T ss_pred             CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHhCCHHHHHHHhhhccccc
Confidence            599999999999999999999999999999999875 7788999999999999999999999999876553

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=97.88  E-value=1.5e-05  Score=68.15  Aligned_cols=69  Identities=26%  Similarity=0.470  Sum_probs=55.2

Q ss_pred             CCcCCcccccCCCC--CCCHHHHHHHHHHHHHHhCCCCCCCC-----hhHHHHHHHHHHHHHHhhhhhhhhhhccc
Q 014884           79 SSKRDPYELLGVPE--NASQDEIKKAFHMLAKQYHPDANKNN-----PSAKRKFQEIRDAYETLRDSEKRAQYDRR  147 (416)
Q Consensus        79 ~~~~~~y~iLgv~~--~a~~~eik~ayr~la~~~HPD~~~~~-----~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~  147 (416)
                      ....+||.+||...  ...+..++.-|....+++|||+....     ..|.+...+||+||.+|.||.+|+.|=.-
T Consensus         5 ~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilk   80 (168)
T KOG3192|consen    5 GSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLK   80 (168)
T ss_pred             chHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            34578999998654  45666677799999999999995432     13678899999999999999999999653

>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

Probab=97.38  E-value=0.00011  Score=75.15  Aligned_cols=58  Identities=31%  Similarity=0.763  Sum_probs=28.6

Q ss_pred             ecCCCCCCCCCCCCcccccCCCcceeEEEeC-----------------CCcccCCCCCCceEEe-eeeeeEeeCCcE
Q 014884          231 PCDSCHGRGFPADAKTKICSTCRGIGRVTIP-----------------PFTSTCSTCKGLGRII-KDHCMTCKGSGV  289 (416)
Q Consensus       231 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~-----------------~~~~~C~~C~G~G~~~-~~~C~~C~g~G~  289 (416)
                      .|+.|+|.|... .....|+.|+|+|.....                 .+..+|..|+|+|.+. -..|..|.|.|.
T Consensus         4 ~C~~C~g~G~i~-v~~e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~v~~~c~~c~G~gk   79 (715)
T COG1107           4 KCPECGGKGKIV-VGEEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVTVYDTCPECGGTGK   79 (715)
T ss_pred             cccccCCCceEe-eeeeecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEEEEeecccCCCcee
Confidence            466666655432 223456666666653100                 0133566666666553 355666655544

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=97.36  E-value=9.1e-05  Score=55.34  Aligned_cols=44  Identities=32%  Similarity=0.778  Sum_probs=31.5

Q ss_pred             eeeecCCCCCCCCCCCC---------cccccCCCcceeEEEeCCCcccCCCCCCce
Q 014884          228 AFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLG  274 (416)
Q Consensus       228 ~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G  274 (416)
                      ....|+.|+|+|.....         ...+|+.|+|+|.++   ...+|..|+|.|
T Consensus        14 ~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i---~~~~C~~C~G~g   66 (66)
T PF00684_consen   14 KPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKII---EKDPCKTCKGSG   66 (66)
T ss_dssp             T-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE----TSSB-SSSTTSS
T ss_pred             CCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEE---CCCCCCCCCCcC
Confidence            34689999999986322         257999999999983   278999999986

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=96.75  E-value=0.0013  Score=58.98  Aligned_cols=69  Identities=32%  Similarity=0.526  Sum_probs=54.8

Q ss_pred             CcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 014884           83 DPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRRSRG  151 (416)
Q Consensus        83 ~~y~iLgv~~~a--~~~eik~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g  151 (416)
                      +++..+|..+.+  ..+.++..|+.+++.+|||+....+.     +.+.+..+|.||.+|.||.+|+.|=..-..|
T Consensus         2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~~g   77 (174)
T COG1076           2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALADG   77 (174)
T ss_pred             CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhccc
Confidence            456667776644  45669999999999999999876543     4457889999999999999999997765444

>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]

Probab=96.56  E-value=0.0018  Score=61.69  Aligned_cols=31  Identities=39%  Similarity=0.867  Sum_probs=19.9

Q ss_pred             cCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEE
Q 014884          266 TCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVT  299 (416)
Q Consensus       266 ~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~  299 (416)
                      .|.+|.|.|.   .+|.+|.|.|.+..-..+.|.
T Consensus       247 ~C~tC~grG~---k~C~TC~gtgsll~~t~~vV~  277 (406)
T KOG2813|consen  247 ECHTCKGRGK---KPCTTCSGTGSLLNYTRIVVY  277 (406)
T ss_pred             cCCcccCCCC---cccccccCccceeeeEEEEEE
Confidence            5666666664   478888888776655444443

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=96.53  E-value=0.0016  Score=53.52  Aligned_cols=41  Identities=34%  Similarity=0.764  Sum_probs=32.6

Q ss_pred             ecCCCCCCCCCCC------CcccccCCCcceeEEEeCCCcccCCCCCCceEEee
Q 014884          231 PCDSCHGRGFPAD------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK  278 (416)
Q Consensus       231 ~C~~C~G~G~~~~------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~  278 (416)
                      .|+.|+|+|....      .....|+.|+|+|..       .|..|.|.|.+.+
T Consensus        54 ~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk~-------~C~~C~G~G~~~~  100 (111)
T PLN03165         54 VCRFCVGSGNVTVELGGGEKEVSKCINCDGAGSL-------TCTTCQGSGIQPR  100 (111)
T ss_pred             CCCCCcCcCeEEEEeCCcEEEEEECCCCCCccee-------eCCCCCCCEEEee
Confidence            8999999987531      125689999999974       4999999998764

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=96.27  E-value=0.0023  Score=57.32  Aligned_cols=54  Identities=43%  Similarity=0.632  Sum_probs=46.5

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--Ch-----hHHHHHHHHHHHHHHh
Q 014884           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN--NP-----SAKRKFQEIRDAYETL  135 (416)
Q Consensus        82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~-----~a~~~f~~i~~Ay~~L  135 (416)
                      .+.|.+|++...++..+|+++|+++...+|||+-..  .+     .+.+++++|++||+.+
T Consensus       113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~  173 (174)
T COG1076         113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI  173 (174)
T ss_pred             hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence            689999999999999999999999999999998432  12     3788899999999853

>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

Probab=96.12  E-value=0.0047  Score=63.54  Aligned_cols=46  Identities=41%  Similarity=0.928  Sum_probs=35.0

Q ss_pred             eeecCCCCCCCCCCCCc------------------ccccCCCcceeEEEeCCCcccCCCCCCceEEe
Q 014884          229 FVPCDSCHGRGFPADAK------------------TKICSTCRGIGRVTIPPFTSTCSTCKGLGRII  277 (416)
Q Consensus       229 ~~~C~~C~G~G~~~~~~------------------~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~  277 (416)
                      ...|+-|+|+|....-.                  -..|+.|+|.|.+.   ...+|+.|+|+|++.
T Consensus        18 ~e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~---v~~~c~~c~G~gkv~   81 (715)
T COG1107          18 EEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVT---VYDTCPECGGTGKVL   81 (715)
T ss_pred             eeecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEE---EEeecccCCCceeEE
Confidence            45799999999863211                  23799999999875   356899999999875

>TIGR02642 phage_xxxx uncharacterized phage protein

Probab=95.85  E-value=0.011  Score=53.30  Aligned_cols=31  Identities=35%  Similarity=0.786  Sum_probs=17.8

Q ss_pred             cccCCCcceeEEEeCCCcccCCCCCCceEEeee
Q 014884          247 KICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD  279 (416)
Q Consensus       247 ~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~  279 (416)
                      .+|+.|+|+|.+...  ..+|+.|+|+|++...
T Consensus       100 ~~C~~C~G~G~~i~~--~~~C~~C~G~G~v~~~  130 (186)
T TIGR02642       100 CKCPRCRGTGLIQRR--QRECDTCAGTGRFRPT  130 (186)
T ss_pred             CcCCCCCCeeEEecC--CCCCCCCCCccEEeee
Confidence            355666666655221  1467777777776543

This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.

>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]

Probab=95.23  E-value=0.021  Score=58.74  Aligned_cols=47  Identities=19%  Similarity=0.399  Sum_probs=36.3

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-------hHHHHHHHHHHHHHHh
Q 014884           89 GVPENASQDEIKKAFHMLAKQYHPDANKNNP-------SAKRKFQEIRDAYETL  135 (416)
Q Consensus        89 gv~~~a~~~eik~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~~L  135 (416)
                      ++..-.+.++|||+||+..+..||||.+..+       .|++.|..+++||+.-
T Consensus       395 sltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f  448 (453)
T KOG0431|consen  395 SLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKF  448 (453)
T ss_pred             chhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhh
Confidence            3444568999999999999999999987652       2667777777777654

>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []

Probab=93.66  E-value=0.18  Score=42.59  Aligned_cols=60  Identities=23%  Similarity=0.276  Sum_probs=41.3

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhh
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRA  142 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~  142 (416)
                      +.-..-..||+|++..+.++|.+.|.+|-...+|++.++-    =.=.+|..|.+.|....+..
T Consensus        55 Mtl~EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGSf----YLQSKV~rAKErl~~El~~~  114 (127)
T PF03656_consen   55 MTLDEARQILNVKEELSREEIQKRYKHLFKANDPSKGGSF----YLQSKVFRAKERLEQELKEE  114 (127)
T ss_dssp             --HHHHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-H----HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCCH----HHHHHHHHHHHHHHHHHHHH
Confidence            4445778999999999999999999999999999988641    11136888999988665443

In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.

>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]

Probab=93.01  E-value=0.044  Score=52.50  Aligned_cols=57  Identities=33%  Similarity=0.726  Sum_probs=41.4

Q ss_pred             eeecCCCCCCCCC--CCCcccccCCCcceeEEEeC--CCcccCCCCCCceEEeeeeeeEeeCCcEEe
Q 014884          229 FVPCDSCHGRGFP--ADAKTKICSTCRGIGRVTIP--PFTSTCSTCKGLGRIIKDHCMTCKGSGVVD  291 (416)
Q Consensus       229 ~~~C~~C~G~G~~--~~~~~~~C~~C~G~G~~~~~--~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~  291 (416)
                      ...|+.|+|.|..  ...++..|+.|-|   +..+  .....|..|+|+|+   ..|.+|+|.|...
T Consensus       198 ~~vc~gc~g~G~~~y~~~~~m~c~sc~G---~~~~k~gt~~~C~~C~G~G~---~~C~tC~grG~k~  258 (406)
T KOG2813|consen  198 AMVCHGCSGSGSNSYGIGTPMHCMSCTG---VPPPKIGTHDLCYMCHGRGI---KECHTCKGRGKKP  258 (406)
T ss_pred             ceeccCcCCCCccccccCcceecccccC---CCCCCCCccchhhhccCCCc---ccCCcccCCCCcc
Confidence            5689999999863  2345778999988   1111  12468999999996   4799999988654

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=89.99  E-value=0.58  Score=45.41  Aligned_cols=78  Identities=21%  Similarity=0.382  Sum_probs=50.5

Q ss_pred             eeeeeeeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEE
Q 014884          223 HVSFDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVK  297 (416)
Q Consensus       223 ~~~~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~  297 (416)
                      .........|..|.|.|....     -...+|..|+|.|.+.    ...|..|.|.|.+...+=.....+..+....+|+
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~----~~~c~~~~g~~~v~~~k~i~i~~~~g~~~~~~l~  250 (288)
T KOG0715|consen  175 AEEGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVL----RDNCQACSGAGQVRRAKDIMIVLPAGVRSADTLR  250 (288)
T ss_pred             cccccccccchhhhCcccccccccCCcceeecccccccceec----cchHHHhhcchhhhhheeEEeecCcccccccEEE
Confidence            445567789999999993221     1123799999999984    3449999999976544444444444444444555


Q ss_pred             EEecccc
Q 014884          298 VTIPAGV  304 (416)
Q Consensus       298 V~Ip~G~  304 (416)
                      +..+...
T Consensus       251 ~~~~~~~  257 (288)
T KOG0715|consen  251 FAGHGND  257 (288)
T ss_pred             EecCCcc
Confidence            5555443

>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=86.58  E-value=0.58  Score=44.35  Aligned_cols=22  Identities=45%  Similarity=1.017  Sum_probs=10.3

Q ss_pred             ecCCCCCCCCCCCCcccccCCCcceeEE
Q 014884          231 PCDSCHGRGFPADAKTKICSTCRGIGRV  258 (416)
Q Consensus       231 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~  258 (416)
                      .|..|.|.++      ..|..|+|+-++
T Consensus       231 ~C~~CGg~rF------lpC~~C~GS~kv  252 (281)
T KOG2824|consen  231 VCESCGGARF------LPCSNCHGSCKV  252 (281)
T ss_pred             cCCCcCCcce------EecCCCCCceee
Confidence            4555554443      245555554444

>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised

Probab=82.69  E-value=3.4  Score=37.67  Aligned_cols=38  Identities=32%  Similarity=0.472  Sum_probs=30.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhh
Q 014884           91 PENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLR  136 (416)
Q Consensus        91 ~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~  136 (416)
                      +++||.+||++|+.++..+|-     +|   ++.-.+|-.||+.+.
T Consensus         1 S~~ASfeEIq~Arn~ll~~y~-----gd---~~~~~~IEaAYD~IL   38 (194)
T PF11833_consen    1 SEDASFEEIQAARNRLLAQYA-----GD---EKSREAIEAAYDAIL   38 (194)
T ss_pred             CCCCCHHHHHHHHHHHHHHhc-----CC---HHHHHHHHHHHHHHH
Confidence            478999999999999999983     23   345567999999654

This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.

>PF14687 DUF4460: Domain of unknown function (DUF4460)

Probab=81.28  E-value=3.7  Score=33.94  Aligned_cols=46  Identities=17%  Similarity=0.351  Sum_probs=34.3

Q ss_pred             CCCCHHHHHHHHHHHHHHhCCCCCCCChh----HHHHHHHHHHHHHHhhh
Q 014884           92 ENASQDEIKKAFHMLAKQYHPDANKNNPS----AKRKFQEIRDAYETLRD  137 (416)
Q Consensus        92 ~~a~~~eik~ayr~la~~~HPD~~~~~~~----a~~~f~~i~~Ay~~L~d  137 (416)
                      +..+..+++.|.|.+-++.|||.....|+    .++-++.++.-.+.|..
T Consensus         4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~   53 (112)
T PF14687_consen    4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKK   53 (112)
T ss_pred             hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhc
Confidence            34567889999999999999999877765    34456666666665553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	416
3lz8_A	329	Structure Of A Putative Chaperone Dnaj From Klebsie		3e-19
2dn9_A	79	Solution Structure Of J-Domain From The Dnaj Homolo		1e-17
2ctr_A	88	Solution Structure Of J-Domain From Human Dnaj Subf		9e-15
1xbl_A	107	Nmr Structure Of The J-Domain (Residues 2-76) In Th		2e-14
1bq0_A	103	J-Domain (Residues 1-77) Of The Escherichia Coli N-		2e-14
1bqz_A	77	J-Domain (Residues 1-77) Of The Escherichia Coli N-		4e-14
1nlt_A	248	The Crystal Structure Of Hsp40 Ydj1 Length = 248		4e-13
3apo_A	780	Crystal Structure Of Full-Length Erdj5 Length = 780		3e-12
2cug_A	88	Solution Structure Of The J Domain Of The Pseudo Dn		3e-12
3apq_A	210	Crystal Structure Of J-Trx1 Fragment Of Erdj5 Lengt		6e-12
2ctw_A	109	Solution Structure Of J-Domain From Mouse Dnaj Subf		8e-12
2lgw_A	99	Solution Structure Of The J Domain Of Hsj1a Length		2e-11
2lo1_A	71	Nmr Structure Of The Protein Bc008182, A Dnaj-Like		3e-11
2dmx_A	92	Solution Structure Of The J Domain Of Dnaj Homolog		3e-11
2ej7_A	82	Solution Structure Of The Dnaj Domain Of The Human		4e-11
2kqx_A	73	Nmr Structure Of The J-Domain (Residues 2-72) In Th		1e-09
1hdj_A	77	Human Hsp40 (Hdj-1), Nmr Length = 77		1e-09
2ctp_A	78	Solution Structure Of J-Domain From Human Dnaj Subf		3e-09
2och_A	73	J-domain Of Dnj-12 From Caenorhabditis Elegans Leng		8e-09
2yua_A	99	Solution Structure Of The Dnaj Domain From Human Wi		1e-08
2ctq_A	112	Solution Structure Of J-Domain From Human Dnaj Subf		1e-07
2o37_A	92	J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From S		3e-07
3agz_A	190	Crystal Structure Of Human Hsp40 Hdj1 Peptide-Bindi		3e-07
2qld_A	183	Human Hsp40 Hdj1 Length = 183		3e-07
2ctt_A	104	Solution Structure Of Zinc Finger Domain From Human		4e-07
3agx_A	181	Crystal Structure Of Human Hsp40 Hdj1 Peptide-Bindi		4e-07
2y4u_A	450	Crystal Structure Of Human P58(Ipk) In Space Group		1e-06
2y4t_A	450	Crystal Structure Of The Human Co-Chaperone P58(Ipk		1e-06
1exk_A	79	Solution Structure Of The Cysteine-Rich Domain Of T		6e-06
2qsa_A	109	Crystal Structure Of J-Domain Of Dnaj Homolog Dnj-2		2e-05
3i38_A	109	Structure Of A Putative Chaperone Protein Dnaj From		6e-05
1wjz_A	94	Soluiotn Structure Of J-Domain Of Mouse Dnaj Like P		1e-04
2l6l_A	155	Solution Structure Of Human J-Protein Co-Chaperone,		4e-04

>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 149/359 (41%), Gaps = 70/359 (19%)
Query: 58  DFGTTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN 117
           D GT  ++     +          +D Y +LGV        IK A+  LA++YHPD +K 
Sbjct: 12  DLGTENLYFQSNAMEL--------KDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE 63
Query: 118 NPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYA 177
           N  A+ KF+++ +A+E L+D       ++RR+      +Y     + +++  D  GF   
Sbjct: 64  N-DAEAKFKDLAEAWEVLKD-------EQRRA------EYD----QLWQHRNDP-GFGRQ 104
Query: 178 YQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHG 237
            QTH      + F +IF   +S F    Q         AA+G    +    F+       
Sbjct: 105 RQTHEQSYSQQDFDDIF---SSMFG---QQAHQRRRQHAARGHDLEIEVAVFL------- 151
Query: 238 RGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVK 297
                  +  +    R I    +P +                      G    +  K + 
Sbjct: 152 -------EETLAEQTRTIS-YNLPVYN-------------------VFGMIESETPKTLN 184
Query: 298 VTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQ 357
           V IPAGV  G  IR+   G  G  G  +G+L++ + +A  P+F   G ++ +   ++  +
Sbjct: 185 VKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWE 244
Query: 358 AILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
           A LG KV VPTL   + + +P G Q GQ L ++GKGL         GD +   ++  PT
Sbjct: 245 AALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSK---THTGDLFAVIKIVMPT 300

>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 39/63 (61%), Positives = 49/63 (77%)
Query: 83  DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRA 142
           D Y++LGVP NASQ EIKKA++ LAK+YHPD NK++P AK KF ++ +AYE L D  KR 
Sbjct: 8   DYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRK 67
Query: 143 QYD 145
           QYD
Sbjct: 68  QYD 70

>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88

Iteration: 1
 Score = 77.8 bits (190), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 36/61 (59%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY 144
           Y++LGVP++AS+ +IKKAFH LA +YHPD NK +P A+ KF+EI +AYETL D+ +R +Y
Sbjct: 10  YDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEY 68
Query: 145 D 145
           D
Sbjct: 69  D 69

>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 51/67 (76%)
Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +K+D YE+LGV + A + EI+KA+  LA +YHPD N+ +  A+ KF+EI++AYE L DS+
Sbjct: 1   AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60
Query: 140 KRAQYDR 146
           KRA YD+
Sbjct: 61  KRAAYDQ 67

>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 51/67 (76%)
Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +K+D YE+LGV + A + EI+KA+  LA +YHPD N+ +  A+ KF+EI++AYE L DS+
Sbjct: 1   AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60
Query: 140 KRAQYDR 146
           KRA YD+
Sbjct: 61  KRAAYDQ 67

>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 51/67 (76%)
Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +K+D YE+LGV + A + EI+KA+  LA +YHPD N+ +  A+ KF+EI++AYE L DS+
Sbjct: 1   AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60
Query: 140 KRAQYDR 146
           KRA YD+
Sbjct: 61  KRAAYDQ 67

>pdb|1NLT|A Chain A, The Crystal Structure Of Hsp40 Ydj1 Length = 248

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 20/227 (8%)
Query: 204 DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTC--RGIGRVT-- 259
           DI+ E+  S  E  KG T  ++ +  + C  C GRG    A  K C++C  +GI  VT  
Sbjct: 13  DIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQ 71
Query: 260 ----IPPFTSTCSTCKGLGRII--KDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVP 313
               I  F + C  C G G II  KD C +C G  V +  K ++V +  G+  G  I   
Sbjct: 72  MGPMIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFK 131
Query: 314 EAGNAGGRGRQHGNLFIKLKVADDP--IFSRDGADVYVDSNISFTQAILGGKVDVPTLSG 371
              +          +FI   V++ P   F RDG D+  ++ I    AI GG+  +  +SG
Sbjct: 132 GEADQAPDVIPGDVVFI---VSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSG 188
Query: 372 ---KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP 415
              KV +   + + PG   V+ GKG+     +  +G+  ++F +  P
Sbjct: 189 DWLKVGIVPGEVIAPGMRKVIEGKGMPIPK-YGGYGNLIIKFTIKDP 234

>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5 Length = 780

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY 144
           Y LLGV + AS  EI++AF  LA + HPD N NNP+A   F +I  AYE L+D + R +Y
Sbjct: 24  YSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKY 83
Query: 145 DRRRSRGSENEKYSAGDAEGFRY 167
           D+   +G E+ +   G  E + Y
Sbjct: 84  DKYGEKGLEDNQ--GGQYESWSY 104

>pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj Protein, Mouse Hypothetical Mkiaa0962 Length = 88

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 83  DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRA 142
           DPY +LGV   ASQ +IKKA+  LA+++HPD NK +P A+ +F +I  AYE L + EKR 
Sbjct: 18  DPYRVLGVSRTASQADIKKAYKKLAREWHPDKNK-DPGAEDRFIQISKAYEILSNEEKRT 76
Query: 143 QYD 145
            YD
Sbjct: 77  NYD 79

>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5 Length = 210

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY 144
           Y LLGV + AS  EI++AF  LA + HPD N NNP+A   F +I  AYE L+D + R +Y
Sbjct: 5   YSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKY 64
Query: 145 DRRRSRGSENEKYSAGDAEGFRY 167
           D+   +G E+ +   G  E + Y
Sbjct: 65  DKYGEKGLEDNQ--GGQYESWSY 85

>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 49/76 (64%)
Query: 76  SCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETL 135
           S  +S    Y +LG+ +NA+ D+IKK++  LA +YHPD N +NP A  KF+EI +A+  L
Sbjct: 11  SLSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAIL 70
Query: 136 RDSEKRAQYDRRRSRG 151
            D+ KR  YD+  S G
Sbjct: 71  TDATKRNIYDKYGSLG 86

>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS-AKRKFQEIRDAYETLRDSEKRAQ 143
           YE+L VP +AS D+IKKA+   A Q+HPD N +N   A++KF+E+ +AYE L D  KR  
Sbjct: 5   YEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREI 64
Query: 144 YDR 146
           YDR
Sbjct: 65  YDR 67

>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY 144
           Y++LGV  NA+Q+E+KKA+  LA +YHPD    NP+   KF++I  AYE L D++KR  Y
Sbjct: 9   YDVLGVKPNATQEELKKAYRKLALKYHPD---KNPNEGEKFKQISQAYEVLSDAKKRELY 65
Query: 145 DR 146
           D+
Sbjct: 66  DK 67

>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/63 (50%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQ 143
           YE+LGV  +AS ++IKKA+  LA ++HPD N +N   A++KF+ + +AYE L DS+KR+ 
Sbjct: 12  YEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSL 71
Query: 144 YDR 146
           YDR
Sbjct: 72  YDR 74

>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 83  DPYELLGVPENASQDEIKKAFHMLAKQYHPDAN-KNNPSAKRKFQEIRDAYETLRDSEKR 141
           D YE+L VP  AS + IKKA+  LA ++HPD N +N   A+R+F+++ +AYE L D++KR
Sbjct: 10  DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKR 69
Query: 142 AQYDR 146
             YDR
Sbjct: 70  DIYDR 74

>pdb|2KQX|A Chain A, Nmr Structure Of The J-Domain (Residues 2-72) In The Escherichia Coli Cbpa Length = 73

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138
           S  +D Y ++GV        IK A+  LA++YHPD +K  P A+ +F+E+ +A+E L D 
Sbjct: 2   SELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDE 60
Query: 139 EKRAQYDR 146
           ++RA+YD+
Sbjct: 61  QRRAEYDQ 68

>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 82  RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR 141
           +D Y+ LG+   AS +EIK+A+   A +YHPD NK  P A+ KF+EI +AY+ L D  KR
Sbjct: 3   KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKR 61
Query: 142 AQYDR 146
             +DR
Sbjct: 62  EIFDR 66

>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           S  D YE+LGV   AS +++KKA+  LA ++HPD N + P A   F+ I  AY  L + E
Sbjct: 5   SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKN-HAPGATEAFKAIGTAYAVLSNPE 63
Query: 140 KRAQYDR 146
           KR QYD+
Sbjct: 64  KRKQYDQ 70

>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY 144
           Y++LGV  +AS +E+KKA+  +A ++HPD    NP    +F++I  AYE L D +KR  Y
Sbjct: 11  YDVLGVKPDASDNELKKAYRKMALKFHPD---KNPDGAEQFKQISQAYEVLSDEKKRQIY 67
Query: 145 DR 146
           D+
Sbjct: 68  DQ 69

>pdb|2YUA|A Chain A, Solution Structure Of The Dnaj Domain From Human Williams- Beuren Syndrome Chromosome Region 18 Protein Length = 99

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 39/72 (54%)
Query: 75  GSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYET 134
           G C  S+   Y+LLGVP  A+Q +IK A++     YHPD N  +  A  +F  I  AY  
Sbjct: 10  GDCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVV 69
Query: 135 LRDSEKRAQYDR 146
           L  +  R +YDR
Sbjct: 70  LGSATLRRKYDR 81

>pdb|2CTQ|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily C Menber 12 Length = 112

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 83  DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRA 142
           D Y LLG  E +S ++I   F + A + HPD +  NP A   FQ+++ A E L + E RA
Sbjct: 21  DYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRA 80
Query: 143 QYDR-RRSRGS 152
           +YD  RRS+ S
Sbjct: 81  RYDHWRRSQMS 91

>pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From Saccharomyces Cerevisiae Length = 92

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY 144
           Y+LLGV  +A++ E+KK +   A +YHPD    +     KF+EI +A+E L D +KR  Y
Sbjct: 11  YDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIY 67
Query: 145 DR 146
           D+
Sbjct: 68  DQ 69

>pdb|3AGZ|A Chain A, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding Domain Complexed With A C-Terminal Peptide Of Hsp70 Length = 190

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Query: 286 GSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGA 345
           G  + +  K + + +  G   G  I  P+ G+          +F+ LK     IF RDG+
Sbjct: 44  GKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFV-LKDKPHNIFKRDGS 102
Query: 346 DVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHG 404
           DV   + IS  +A+ G  V+VPTL G+ + V     ++PG    + G+GL         G
Sbjct: 103 DVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRG 162
Query: 405 DQYVRFRVNFP 415
           D  + F V FP
Sbjct: 163 DLIIEFEVIFP 173

>pdb|2QLD|A Chain A, Human Hsp40 Hdj1 Length = 183

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Query: 286 GSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGA 345
           G  + +  K + + +  G   G  I  P+ G+          +F+ LK     IF RDG+
Sbjct: 37  GKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFV-LKDKPHNIFKRDGS 95
Query: 346 DVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHG 404
           DV   + IS  +A+ G  V+VPTL G+ + V     ++PG    + G+GL         G
Sbjct: 96  DVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRG 155
Query: 405 DQYVRFRVNFP 415
           D  + F V FP
Sbjct: 156 DLIIEFEVIFP 166

>pdb|2CTT|A Chain A, Solution Structure Of Zinc Finger Domain From Human Dnaj Subfamily A Menber 3 Length = 104

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 209 LVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--PFT-- 264
           + L+F +AAKG  K  + +    C+ C+G+G     K + C  C G G  TI   PF   
Sbjct: 8   MELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINTGPFVMR 67
Query: 265 STCSTCKGLGRIIKDHCMTCKGSG 288
           STC  C G G II   C+ C+G+G
Sbjct: 68  STCRRCGGRGSIIISPCVVCRGAG 91

>pdb|3AGX|A Chain A, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding Domain Length = 181

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Query: 286 GSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGA 345
           G  + +  K + + +  G   G  I  P+ G+          +F+ LK     IF RDG+
Sbjct: 35  GKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFV-LKDKPHNIFKRDGS 93
Query: 346 DVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHG 404
           DV   + IS  +A+ G  V+VPTL G+ + V     ++PG    + G+GL         G
Sbjct: 94  DVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRG 153
Query: 405 DQYVRFRVNFP 415
           D  + F V FP
Sbjct: 154 DLIIEFEVIFP 164

>pdb|2Y4U|A Chain A, Crystal Structure Of Human P58(Ipk) In Space Group P312 Length = 450

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN---NPSAKRKFQEIRDAYETL 135
           S KRD Y++LGV  NA + EI KA+  LA Q+HPD  +N      A++KF +I  A E L
Sbjct: 379 SQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVL 438
Query: 136 RDSEKRAQYD 145
            D E R ++D
Sbjct: 439 SDPEXRKKFD 448

>pdb|2Y4T|A Chain A, Crystal Structure Of The Human Co-Chaperone P58(Ipk) Length = 450

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN---NPSAKRKFQEIRDAYETL 135
           S KRD Y++LGV  NA + EI KA+  LA Q+HPD  +N      A++KF +I  A E L
Sbjct: 379 SQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVL 438
Query: 136 RDSEKRAQYD 145
            D E R ++D
Sbjct: 439 SDPEMRKKFD 448

>pdb|1EXK|A Chain A, Solution Structure Of The Cysteine-Rich Domain Of The Escherichia Coli Chaperone Protein Dnaj Length = 79

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 221 TKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRI 276
           TK +       CD CHG G     + + C TC G G+V +         TC  C+G G +
Sbjct: 3   TKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTL 62
Query: 277 IKDHCMTCKGSGVVD 291
           IKD C  C G G V+
Sbjct: 63  IKDPCNKCHGHGRVE 77

>pdb|2QSA|A Chain A, Crystal Structure Of J-Domain Of Dnaj Homolog Dnj-2 Precursor From C.Elegans Length = 109

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 78  YSSKRDPYELLGVP-ENASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYE 133
           Y    + Y++L V  E   + ++ KA+  LA+++HPD  KN      A+ +F+ I  AYE
Sbjct: 11  YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYE 70
Query: 134 TLRDSEKRAQYD 145
           TL+D E +  YD
Sbjct: 71  TLKDDEAKTNYD 82

>pdb|3I38|A Chain A, Structure Of A Putative Chaperone Protein Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 Length = 109

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 338 PIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKN 397
           P+F   G ++ +   ++  +A LG KV VPTL   + + +P G Q GQ L ++GKGL   
Sbjct: 5   PLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSK 64
Query: 398 GLFLDHGDQYVRFRVNFPT 416
                 GD +   ++  PT
Sbjct: 65  ---THTGDLFAVIKIVXPT 80

>pdb|1WJZ|A Chain A, Soluiotn Structure Of J-Domain Of Mouse Dnaj Like Protein Length = 94

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 16/96 (16%)
Query: 60  GTTGMFLARRCIHATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP 119
           G++GM L +          + K+D Y +LG   +A+  ++K+ +  L   YHPD    + 
Sbjct: 4   GSSGMALEQ----------TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADV 53
Query: 120 SA------KRKFQEIRDAYETLRDSEKRAQYDRRRS 149
            A       +KF EI  A++ L + E + +YD +RS
Sbjct: 54  PAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89

>pdb|2L6L|A Chain A, Solution Structure Of Human J-Protein Co-Chaperone, Dph4 Length = 155

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSA------KRKFQEIRDAYET 134
           K+D Y +LG   +A+  ++K+ +  L   YHPD    +  A       +KF EI  A++ 
Sbjct: 9   KKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKI 68
Query: 135 LRDSEKRAQYDRRR 148
           L + E + +YD +R
Sbjct: 69  LGNEETKREYDLQR 82

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	416
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	2e-90
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	6e-65
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	7e-39
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	1e-38
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	7e-33
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	8e-33
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	1e-32
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	3e-32
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	5e-32
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	2e-31
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	6e-31
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	2e-30
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	2e-30
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	6e-30
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	8e-30
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	1e-29
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	3e-29
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	4e-29
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	5e-29
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	1e-28
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	2e-28
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	5e-28
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	1e-27
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	4e-27
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	2e-26
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	3e-24
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	7e-24
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	7e-24
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	1e-23
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	4e-22
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	2e-19
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	2e-18
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	2e-18
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	2e-17
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	3e-17
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	1e-16
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	1e-13
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	1e-13
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	3e-13
2guz_A	71	Mitochondrial import inner membrane translocase su	2e-10
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	2e-09
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	2e-08

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329

 Score =  275 bits (705), Expect = 2e-90
 Identities = 84/348 (24%), Positives = 140/348 (40%), Gaps = 84/348 (24%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
             +D Y +LGV        IK A+  LA++YHPD +K    A+ KF+++ +A+E L+D +
Sbjct: 26  ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSK-ENDAEAKFKDLAEAWEVLKDEQ 84

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--- 196
           +RA+YD+                       +  GF    QTH      + F +IF     
Sbjct: 85  RRAEYDQ------------------LWQHRNDPGFGRQRQTHEQSYSQQDFDDIFSSMFG 126

Query: 197 --------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKI 248
                   + +    D+++E+ +   E     T+ +S++  +P  +  G       KT  
Sbjct: 127 QQAHQRRRQHAARGHDLEIEVAVFLEETLAEQTRTISYN--LPVYNVFGMIESETPKT-- 182

Query: 249 CSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD 308
                                                          + V IPAGV  G 
Sbjct: 183 -----------------------------------------------LNVKIPAGVVDGQ 195

Query: 309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPT 368
            IR+   G  G  G  +G+L++ + +A  P+F   G ++ +   ++  +A LG KV VPT
Sbjct: 196 RIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPT 255

Query: 369 LSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
           L   + + +P G Q GQ L ++GKGL         GD +   ++  PT
Sbjct: 256 LKESILLTVPPGSQAGQRLRIKGKGLVSKT---HTGDLFAVIKIVMPT 300

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1 Length = 248

 Score =  207 bits (529), Expect = 6e-65
 Identities = 65/229 (28%), Positives = 101/229 (44%), Gaps = 20/229 (8%)

Query: 203 PDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVT--- 259
            DI+ E+  S  E  KG T  ++ +  + C  C GRG    A  K C++C G G      
Sbjct: 12  KDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKK-CTSCNGQGIKFVTR 70

Query: 260 -IPP----FTSTCSTCKGLGRII--KDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRV 312
            + P    F + C  C G G II  KD C +C G  V +  K ++V +  G+  G  I  
Sbjct: 71  QMGPMIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVF 130

Query: 313 PEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK 372
               +        G++   +       F RDG D+  ++ I    AI GG+  +  +SG 
Sbjct: 131 KGEADQA-PDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGD 189

Query: 373 -VQVKIPKG--VQPGQLLVLRGKGL--AKNGLFLDHGDQYVRFRVNFPT 416
            ++V I  G  + PG   V+ GKG+   K G    +G+  ++F +  P 
Sbjct: 190 WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG---GYGNLIIKFTIKDPE 235

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A Length = 170

 Score =  136 bits (345), Expect = 7e-39
 Identities = 33/150 (22%), Positives = 63/150 (42%), Gaps = 8/150 (5%)

Query: 270 CKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLF 329
             G  +  K   +  KG        ++ + +  G  +G  I     G+   +  +   L 
Sbjct: 15  FVGKKKSFK---IGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQ 71

Query: 330 IKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQPGQLLV 388
             ++    P F RDG D+     +SF +++LG    + T+ G  + +   + VQP Q   
Sbjct: 72  FVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTST 131

Query: 389 LRGKGL--AKNGLFLDHGDQYVRFRVNFPT 416
             G+G+   KN      G+  V+++V++P 
Sbjct: 132 YPGQGMPTPKNP--SQRGNLIVKYKVDYPI 159

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II} Length = 180

 Score =  136 bits (345), Expect = 1e-38
 Identities = 33/148 (22%), Positives = 56/148 (37%), Gaps = 1/148 (0%)

Query: 270 CKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLF 329
             G  + IK          V +    V+V I  G   G  +     G+    G   G+L 
Sbjct: 18  YLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLV 77

Query: 330 IKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQPGQLLV 388
           + ++    P F+RD   + +   I   +A+ G    V TL    +Q+ I + V P    +
Sbjct: 78  LIIQTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKI 137

Query: 389 LRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
           +  +G+         GD  + F + FP 
Sbjct: 138 VPNEGMPIKNQPGQKGDLILEFDICFPK 165

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103

 Score =  118 bits (298), Expect = 7e-33
 Identities = 46/115 (40%), Positives = 64/115 (55%), Gaps = 14/115 (12%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           +K+D YE+LGV + A + EI+KA+  LA +YHPD N+ +  A+ KF+EI++AYE L DS+
Sbjct: 1   AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIF 194
           KRA YD+      E          GF    D           FSD F  +F +IF
Sbjct: 61  KRAAYDQYGHAAFEQ---GGMGGGGFGGGAD-----------FSDIFGDVFGDIF 101

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score =  117 bits (295), Expect = 8e-33
 Identities = 40/67 (59%), Positives = 50/67 (74%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           S  D Y++LGVP NASQ EIKKA++ LAK+YHPD NK++P AK KF ++ +AYE L D  
Sbjct: 5   SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEV 64

Query: 140 KRAQYDR 146
           KR QYD 
Sbjct: 65  KRKQYDA 71

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112

 Score =  117 bits (296), Expect = 1e-32
 Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 1/96 (1%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138
               D Y LLG  E +S ++I   F + A + HPD +  NP A   FQ+++ A E L + 
Sbjct: 17  EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNE 76

Query: 139 EKRAQYDR-RRSRGSENEKYSAGDAEGFRYAGDAEG 173
           E RA+YD  RRS+ S   +      +  + +G + G
Sbjct: 77  ESRARYDHWRRSQMSMPFQQWEALNDSVKTSGPSSG 112

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score =  116 bits (293), Expect = 3e-32
 Identities = 31/92 (33%), Positives = 45/92 (48%)

Query: 73  ATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAY 132
           + G C  S+   Y+LLGVP  A+Q +IK A++     YHPD N  +  A  +F  I  AY
Sbjct: 8   SQGDCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAY 67

Query: 133 ETLRDSEKRAQYDRRRSRGSENEKYSAGDAEG 164
             L  +  R +YDR      +     +G + G
Sbjct: 68  VVLGSATLRRKYDRGLLSDEDLRGPGSGPSSG 99

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A Length = 181

 Score =  118 bits (299), Expect = 5e-32
 Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 4/150 (2%)

Query: 270 CKGLGRIIK--DHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGN 327
             G  + +K     +   G  + +  K + + +  G   G  I  P+ G+         +
Sbjct: 17  YSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQT-SNNIPAD 75

Query: 328 LFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQPGQL 386
           +   LK     IF RDG+DV   + IS  +A+ G  V+VPTL G  + V     ++PG  
Sbjct: 76  IVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMR 135

Query: 387 LVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416
             + G+GL         GD  + F V FP 
Sbjct: 136 RKVPGEGLPLPKTPEKRGDLIIEFEVIFPE 165

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210

 Score =  118 bits (296), Expect = 2e-31
 Identities = 43/156 (27%), Positives = 64/156 (41%), Gaps = 19/156 (12%)

Query: 82  RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR 141
           ++ Y LLGV + AS  EI++AF  LA + HPD N NNP+A   F +I  AYE L+D + R
Sbjct: 2   QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLR 61

Query: 142 AQYDR--------RRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEI 193
            +YD+         +    E+  Y   D   +    +             +S    F   
Sbjct: 62  KKYDKYGEKGLEDNQGGQYESWSYYRYDFGIYDDDPEIITLERREFDAAVNSGELWFVNF 121

Query: 194 FEDETSH---FAPDIQVELVLSFAEAAKGCTKHVSF 226
           +    SH    AP        ++ E AK     +  
Sbjct: 122 YSPGCSHCHDLAP--------TWREFAKEVDGLLRI 149

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155

 Score =  114 bits (288), Expect = 6e-31
 Identities = 27/164 (16%), Positives = 52/164 (31%), Gaps = 38/164 (23%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS------AKRKFQEIRDAY 132
             K+D Y +LG   +A+  ++K+ +  L   YHPD    +          +KF EI  A+
Sbjct: 7   MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAW 66

Query: 133 ETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFR-YAGDAEGFRYAYQTHFSDSFHKIFS 191
           + L + E + +YD +R                    + +     +         +     
Sbjct: 67  KILGNEETKREYDLQRCEDDLRNVGPVDAQVYLEEMSWNEGDHSFYLSCRCGGKY----- 121

Query: 192 EIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSC 235
            + +DE                              + + CD+C
Sbjct: 122 SVSKDE--------------------------AEEVSLISCDTC 139

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88

 Score =  111 bits (280), Expect = 2e-30
 Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 1/68 (1%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138
           +   DPY +LGV   ASQ +IKKA+  LA+++HPD NK +P A+ +F +I  AYE L + 
Sbjct: 14  ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNK-DPGAEDRFIQISKAYEILSNE 72

Query: 139 EKRAQYDR 146
           EKR  YD 
Sbjct: 73  EKRTNYDH 80

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109

 Score =  111 bits (280), Expect = 2e-30
 Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 1/95 (1%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           S    Y +LG+ +NA+ D+IKK++  LA +YHPD N +NP A  KF+EI +A+  L D+ 
Sbjct: 15  SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDAT 74

Query: 140 KRAQYDRRRSRG-SENEKYSAGDAEGFRYAGDAEG 173
           KR  YD+  S G    E++   +   +  +G + G
Sbjct: 75  KRNIYDKYGSLGLYVAEQFGEENVNTYFVSGPSSG 109

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score =  110 bits (276), Expect = 6e-30
 Identities = 40/85 (47%), Positives = 57/85 (67%), Gaps = 1/85 (1%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           S    Y++LGVP++AS+ +IKKAFH LA +YHPD NK +P A+ KF+EI +AYETL D+ 
Sbjct: 5   SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDAN 63

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEG 164
           +R +YD        + K  +G + G
Sbjct: 64  RRKEYDTLGHSAFTSGKGQSGPSSG 88

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score =  109 bits (275), Expect = 8e-30
 Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           S  D YE+LGV   AS +++KKA+  LA ++HPD N   P A   F+ I  AY  L + E
Sbjct: 5   SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNH-APGATEAFKAIGTAYAVLSNPE 63

Query: 140 KRAQYDR 146
           KR QYD+
Sbjct: 64  KRKQYDQ 70

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780

 Score =  120 bits (302), Expect = 1e-29
 Identities = 44/175 (25%), Positives = 68/175 (38%), Gaps = 17/175 (9%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
             ++ Y LLGV + AS  EI++AF  LA + HPD N NNP+A   F +I  AYE L+D +
Sbjct: 19  HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDED 78

Query: 140 KRAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETS 199
            R +YD+    G +  + + G           +   Y           + F         
Sbjct: 79  LRKKYDK---YGEKGLEDNQGGQYESWSYYRYDFGIYDDDPEIITLERREFDAAVNSGEL 135

Query: 200 H----FAP--DIQVELVLSFAEAAKGCTKHVSFDAFVPCDS----CHG---RGFP 241
                ++P      +L  ++ E AK     +     V C      C       +P
Sbjct: 136 WFVNFYSPGSSHSHDLAPTWREFAKEVDGLLRI-GAVNCGDDRMLCRMKGVNSYP 189

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82

 Score =  108 bits (271), Expect = 3e-29
 Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 1/69 (1%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS-AKRKFQEIRDAYETLRD 137
           S   D YE+L VP  AS + IKKA+  LA ++HPD N  N   A+R+F+++ +AYE L D
Sbjct: 6   SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSD 65

Query: 138 SEKRAQYDR 146
           ++KR  YDR
Sbjct: 66  AKKRDIYDR 74

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99

 Score =  108 bits (271), Expect = 4e-29
 Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 4/101 (3%)

Query: 82  RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEK 140
              YE+L VP +AS D+IKKA+   A Q+HPD N +N   A++KF+E+ +AYE L D  K
Sbjct: 2   ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHK 61

Query: 141 RAQYDRRRSRGSENEKYSAGDAEGFRYAGDAEGFRYAYQTH 181
           R  YDR    G E    +              G  + +  H
Sbjct: 62  REIYDR---YGREGLTGTGTGPSRAEAGSGGPGLEHHHHHH 99

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp} Length = 109

 Score =  108 bits (272), Expect = 5e-29
 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%)

Query: 338 PIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKN 397
           P+F   G ++ +   ++  +A LG KV VPTL   + + +P G Q GQ L ++GKGL   
Sbjct: 5   PLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSK 64

Query: 398 GLFLDHGDQYVRFRVNFPT 416
                 GD +   ++  PT
Sbjct: 65  T---HTGDLFAVIKIVMPT 80

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92

 Score =  106 bits (267), Expect = 1e-28
 Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 1/87 (1%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS-AKRKFQEIRDAYETLRD 137
           S   + YE+LGV  +AS ++IKKA+  LA ++HPD N +N   A++KF+ + +AYE L D
Sbjct: 6   SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSD 65

Query: 138 SEKRAQYDRRRSRGSENEKYSAGDAEG 164
           S+KR+ YDR           ++G + G
Sbjct: 66  SKKRSLYDRAGCDSWRAGGGASGPSSG 92

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109

 Score =  106 bits (267), Expect = 2e-28
 Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 7/94 (7%)

Query: 78  YSSKRDPYELLGVPENA-SQDEIKKAFHMLAKQYHPDANKNNP---SAKRKFQEIRDAYE 133
           Y    + Y++L V      + ++ KA+  LA+++HPD  KN      A+ +F+ I  AYE
Sbjct: 11  YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYE 70

Query: 134 TLRDSEKRAQYDRRRSRGSENEKYSAGDAEGFRY 167
           TL+D E +  YD         ++      + +R 
Sbjct: 71  TLKDDEAKTNYDY---YLDHPDQRFYNYYQYYRL 101

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94

 Score =  105 bits (263), Expect = 5e-28
 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 6/81 (7%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS------AKRKFQEIRDAY 132
           + K+D Y +LG   +A+  ++K+ +  L   YHPD    +          +KF EI  A+
Sbjct: 13  TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAW 72

Query: 133 ETLRDSEKRAQYDRRRSRGSE 153
           + L + E + +YD +RS  S 
Sbjct: 73  KILGNEETKKKYDLQRSGPSS 93

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77

 Score =  103 bits (260), Expect = 1e-27
 Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 1/66 (1%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEK 140
            +D Y+ LG+   AS +EIK+A+   A +YHPD NK  P A+ KF+EI +AY+ L D  K
Sbjct: 2   GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRK 60

Query: 141 RAQYDR 146
           R  +DR
Sbjct: 61  REIFDR 66

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73

 Score =  102 bits (256), Expect = 4e-27
 Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 3/67 (4%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
            +   Y++LGV  +AS +E+KKA+  +A ++HPD    NP    +F++I  AYE L D +
Sbjct: 6   KETGYYDVLGVKPDASDNELKKAYRKMALKFHPD---KNPDGAEQFKQISQAYEVLSDEK 62

Query: 140 KRAQYDR 146
           KR  YD+
Sbjct: 63  KRQIYDQ 69

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92

 Score =  100 bits (252), Expect = 2e-26
 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 3/67 (4%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
            +   Y+LLGV  +A++ E+KK +   A +YHPD          KF+EI +A+E L D +
Sbjct: 6   KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDK---PTGDTEKFKEISEAFEILNDPQ 62

Query: 140 KRAQYDR 146
           KR  YD+
Sbjct: 63  KREIYDQ 69

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 104

 Score = 95.3 bits (238), Expect = 3e-24
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 204 DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP-- 261
                + L+F +AAKG  K  + +    C+ C+G+G     K + C  C G G  TI   
Sbjct: 3   SGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINTG 62

Query: 262 PFT--STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVT 299
           PF   STC  C G G II   C+ C+G+G     K    +
Sbjct: 63  PFVMRSTCRRCGGRGSIIISPCVVCRGAGQAKQKKRSGPS 102

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174

 Score = 96.5 bits (240), Expect = 7e-24
 Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 6/89 (6%)

Query: 79  SSKRDPYELLGVPENASQD--EIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLR 136
                  +LLG+  +A  +   ++KA+    K++HPD   +    + K +++   Y+ + 
Sbjct: 8   EESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKME 63

Query: 137 DSEKRAQYDRRRSRGSENEKYSAGDAEGF 165
           D  K A            E +++    G 
Sbjct: 64  DGVKYAHQPDFGGFWDATEVFASSLNPGV 92

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88

 Score = 93.6 bits (233), Expect = 7e-24
 Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 4/76 (5%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS-AKRKFQEIRDAYETLRD 137
           S  ++   ++       + E KK    L  ++HPD N  N   A   F+ +++    L  
Sbjct: 13  SILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRL-- 70

Query: 138 SEKRAQYDRRRSRGSE 153
            EK+A  D+   R S 
Sbjct: 71  -EKQAFLDQNADRASR 85

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score = 93.2 bits (232), Expect = 1e-23
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139
           + +D +++LGV   AS+DE+ KA+  LA   HPD     P ++  F+ + +A   L  + 
Sbjct: 25  NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCV-APGSEDAFKAVVNARTALLKNI 83

Query: 140 KRAQYD 145
           K     
Sbjct: 84  KSGPSS 89

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114

 Score = 89.9 bits (223), Expect = 4e-22
 Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 6/95 (6%)

Query: 79  SSKRDPYELLGVPENASQD--EIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLR 136
                  +LLG+  +A  +   ++KA+    K++HPD   +    + K +++   Y+ + 
Sbjct: 5   EESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKME 60

Query: 137 DSEKRAQYDRRRSRGSENEKYSAGDAEGFRYAGDA 171
           D  K A            E  + G  E  ++    
Sbjct: 61  DGVKYAHQPDFGGFWDATEIPTYGTDEWEQWWNAF 95

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae} Length = 121

 Score = 79.6 bits (197), Expect = 2e-18
 Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 8/82 (9%)

Query: 340 FSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG--VQPGQLLVLRGKG--L 394
           F RDG D+  ++ I    AI GG+  +  +SG  ++V I  G  + PG   V+ GKG  +
Sbjct: 2   FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI 61

Query: 395 AKNGLFLDHGDQYVRFRVNFPT 416
            K G    +G+  ++F + FP 
Sbjct: 62  PKYG---GYGNLIIKFTIKFPE 80

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171

 Score = 81.2 bits (200), Expect = 2e-18
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 7/72 (9%)

Query: 83  DPYELLGVPENASQD--EIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETL 135
           D + L G+P     D   +   F  L +QYHPD   +        A ++   I  A++TL
Sbjct: 2   DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61

Query: 136 RDSEKRAQYDRR 147
           R    RA+Y   
Sbjct: 62  RHPLMRAEYLLS 73

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450

 Score = 82.4 bits (204), Expect = 2e-17
 Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 3/71 (4%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYETL 135
           S KRD Y++LGV  NA + EI KA+  LA Q+HPD  +N      A++KF +I  A E L
Sbjct: 379 SQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVL 438

Query: 136 RDSEKRAQYDR 146
            D E R ++D 
Sbjct: 439 SDPEMRKKFDD 449

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1 Length = 79

 Score = 75.0 bits (185), Expect = 3e-17
 Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 4/76 (5%)

Query: 219 GCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLG 274
           G TK +       CD CHG G     + + C TC G G+V +         TC  C+G G
Sbjct: 1   GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRG 60

Query: 275 RIIKDHCMTCKGSGVV 290
            +IKD C  C G G V
Sbjct: 61  TLIKDPCNKCHGHGRV 76

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181

 Score = 76.6 bits (188), Expect = 1e-16
 Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 10/82 (12%)

Query: 79  SSKRDPYELLGVPE-------NASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDA 131
                 YEL               Q  ++K +  L  Q+HPD  +       +   +  A
Sbjct: 8   RFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQA 64

Query: 132 YETLRDSEKRAQYDRRRSRGSE 153
           Y TL+D  +R+QY  +  R  +
Sbjct: 65  YHTLKDPLRRSQYMLKLLRNID 86

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182

 Score = 68.0 bits (165), Expect = 1e-13
 Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYETLRDSEKR 141
           ++ +G+ +  + +++KK +       HPD     P    AK  F E+ DA+    +  ++
Sbjct: 120 WKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQK 179

Query: 142 AQY 144
             Y
Sbjct: 180 PLY 182

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207

 Score = 68.6 bits (167), Expect = 1e-13
 Identities = 16/94 (17%), Positives = 29/94 (30%), Gaps = 7/94 (7%)

Query: 79  SSKRDPYELLGVPE--NASQDEIKKAFHMLAKQYHPDANKNNPSAKR-----KFQEIRDA 131
              RD + L+           +++  +  L +  HPD        ++         + DA
Sbjct: 40  DPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDA 99

Query: 132 YETLRDSEKRAQYDRRRSRGSENEKYSAGDAEGF 165
           Y+TL     R  Y  +       E+        F
Sbjct: 100 YKTLLAPLSRGLYLLKLHGIEIPERTDYEMDRQF 133

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79

 Score = 63.8 bits (155), Expect = 3e-13
 Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 6/73 (8%)

Query: 79  SSKRDPYELLGVPENASQD--EIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLR 136
           + K    ELL +P     D   +++A+   +   HPD   ++       QE+   + T +
Sbjct: 8   ADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSH----ALMQELNSLWGTFK 63

Query: 137 DSEKRAQYDRRRS 149
                 + +   +
Sbjct: 64  TEVYNLRMNLGGT 76

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71

 Score = 55.4 bits (134), Expect = 2e-10
 Identities = 10/63 (15%), Positives = 26/63 (41%), Gaps = 5/63 (7%)

Query: 80  SKRDPYELLGVPENA-SQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138
           + ++  ++L + EN  ++ ++K+    +    HPD   +         +I +A + L   
Sbjct: 12  NSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSP----FLATKINEAKDFLEKR 67

Query: 139 EKR 141
              
Sbjct: 68  GIS 70

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92

 Score = 53.5 bits (128), Expect = 2e-09
 Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYETLRD 137
           ++ +G+ +  + +++KK +       HP      P    AK  F E+ DA+    +
Sbjct: 36  WKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106

 Score = 50.8 bits (121), Expect = 2e-08
 Identities = 7/61 (11%), Positives = 27/61 (44%), Gaps = 7/61 (11%)

Query: 85  YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS-------AKRKFQEIRDAYETLRD 137
           ++ + + +    + ++K++       HPD  +   +       A++ F+ +++A++    
Sbjct: 43  WKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNT 102

Query: 138 S 138
            
Sbjct: 103 L 103

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	416
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	100.0
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	100.0
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	100.0
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	100.0
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	100.0
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	99.88
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	99.86
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	99.86
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	99.84
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	99.84
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	99.84
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	99.83
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	99.83
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	99.83
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	99.83
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	99.82
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	99.82
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	99.82
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	99.81
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	99.81
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	99.81
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	99.8
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	99.77
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	99.76
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	99.74
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	99.74
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	99.73
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	99.73
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	99.73
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	99.7
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	99.69
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	99.69
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	99.68
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	99.66
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	99.66
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	99.64
2guz_A	71	Mitochondrial import inner membrane translocase su	99.63
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	99.6
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	99.59
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	99.55
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	99.31
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	99.27
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	98.92
2guz_B	65	Mitochondrial import inner membrane translocase su	98.85
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	98.8
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	98.74
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	98.72
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	98.72
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	98.71
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	98.68
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	97.46
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	97.4
3pmq_A	669	Decaheme cytochrome C MTRF; greek KEY, C type cyto	97.4
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	97.36
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	96.67
2bx9_A	53	Anti-trap, AT, tryptophan RNA-binding attenuator p	96.61
2bx9_A	53	Anti-trap, AT, tryptophan RNA-binding attenuator p	96.58
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	88.02

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=100.00  E-value=9.9e-62  Score=473.60  Aligned_cols=269  Identities=30%  Similarity=0.553  Sum_probs=144.9

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCcccc
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYS  158 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~  158 (416)
                      +...|||+||||+++||.+|||+|||+||++||||++++ ++|+++|++|++||++|+||.+|+.||+++..+... .++
T Consensus        25 m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~-~~~  102 (329)
T 3lz8_A           25 MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE-NDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDP-GFG  102 (329)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC-hHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCC-Ccc
Confidence            455799999999999999999999999999999999974 578999999999999999999999999984322110 000


Q ss_pred             CCCCCCCccCCCCCCceeccccccccchhhhhhhhhcC-------CCcccCCCeEEEEEeeeeecccCcceeeeeeeeee
Q 014884          159 AGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP  231 (416)
Q Consensus       159 ~~~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~-------~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~  231 (416)
                          .++.+  .+.+|.       +.+|.++|+.+|++       ....++.|++++|.|+|+|+|+|+++.+.+++.+.
T Consensus       103 ----~~~~~--~~~~f~-------~~~f~diF~~~Fg~~g~~~~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~  169 (329)
T 3lz8_A          103 ----RQRQT--HEQSYS-------QQDFDDIFSSMFGQQAHQRRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVY  169 (329)
T ss_dssp             -----------------------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEEC
T ss_pred             ----ccccc--ccCCcC-------CCchhhhhHhhhcCcCCCCCCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEee
Confidence                00100  001110       01344556666643       12457899999999999999999999999987763


Q ss_pred             cCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccCCCEEE
Q 014884          232 CDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR  311 (416)
Q Consensus       232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~  311 (416)
                      |    +.                 |.+                              .+...++++|+||||+++|++|+
T Consensus       170 ~----g~-----------------G~v------------------------------~~~~~~~l~V~IP~Gv~~G~~Ir  198 (329)
T 3lz8_A          170 N----VF-----------------GMI------------------------------ESETPKTLNVKIPAGVVDGQRIR  198 (329)
T ss_dssp             C----SC-----------------C-C------------------------------CEEEEEEEEEEECTTCCTTCEEE
T ss_pred             c----CC-----------------eEE------------------------------EEecceEEEEeCCCCCCCCCEEE
Confidence            2    11                 111                              12335689999999999999999


Q ss_pred             EcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCcEEEEcC
Q 014884          312 VPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRG  391 (416)
Q Consensus       312 ~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~~~~l~g  391 (416)
                      |+|+|+++..++.+|||||+|+|+||+.|+|+|+||+++++|+|+||++|++++|+||||++.|+||++++||+++||+|
T Consensus       199 l~G~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~v~l~ip~gt~~g~~~rl~G  278 (329)
T 3lz8_A          199 LKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKG  278 (329)
T ss_dssp             ESSCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEEEETT
T ss_pred             EcccccCCCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCCEEEEECCCCCCCCEEEEcC
Confidence            99999998777889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          392 KGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       392 ~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      +|||..+   .+|||||+|+|+||+
T Consensus       279 ~GmP~~~---~rGDL~v~~~V~~P~  300 (329)
T 3lz8_A          279 KGLVSKT---HTGDLFAVIKIVMPT  300 (329)
T ss_dssp             CSCBCSS---CBCCEEEEEEECCCS
T ss_pred             CCCCCCC---CCCCEEEEEEEECCC
Confidence            9999763   479999999999995

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=100.00  E-value=1.8e-54  Score=407.66  Aligned_cols=215  Identities=29%  Similarity=0.557  Sum_probs=200.2

Q ss_pred             cccCCCeEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCC
Q 014884          199 SHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTC  270 (416)
Q Consensus       199 ~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C  270 (416)
                      ..+++|++++|.|||+|||+|+++++.+++.+.|+.|+|+|+..+. ..+|+.|+|+|++...        .++++|+.|
T Consensus         8 ~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~-~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C   86 (248)
T 1nlt_A            8 PQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVC   86 (248)
T ss_dssp             CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTT-CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTC
T ss_pred             CCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCC-CccCCCCCCCcEEEEEEecCceEEEEEEcCCCC
Confidence            3578999999999999999999999999999999999999998877 4899999999986421        246799999


Q ss_pred             CCceEEe--eeeeeEeeCCcEEeceEEEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceE
Q 014884          271 KGLGRII--KDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVY  348 (416)
Q Consensus       271 ~G~G~~~--~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~  348 (416)
                      +|+|+++  +++|..|+|.|++.+.++++|+||||+++|++|+|+|+|++++ ++.+|||||+|+++||+.|+|+|+||+
T Consensus        87 ~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~-~g~~GDl~v~i~v~~h~~F~R~G~DL~  165 (248)
T 1nlt_A           87 HGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAP-DVIPGDVVFIVSERPHKSFKRDGDDLV  165 (248)
T ss_dssp             SSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCT-TCBCCCEEEEEEECCCSSCEEETTEEE
T ss_pred             CCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCC-CCCcceEEEEEEEecCccceeeCCEEE
Confidence            9999999  8999999999999999999999999999999999999999975 568999999999999999999999999


Q ss_pred             EEEecCHHHHhcCCeeEEecCCCe-EEEEeCCC--CCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          349 VDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG--VQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       349 ~~~~I~l~~Al~G~~~~i~~ldg~-~~v~ip~g--~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      ++++|+|.||++|++++|+||||+ +.|+||++  ++||++++|+|+|||..+.. .+|||||+|+|+||+
T Consensus       166 ~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~  235 (248)
T 1nlt_A          166 YEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPE  235 (248)
T ss_dssp             EEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC
T ss_pred             EEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCC
Confidence            999999999999999999999995 89999998  99999999999999986443 579999999999995

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=100.00  E-value=5.3e-42  Score=307.80  Aligned_cols=163  Identities=28%  Similarity=0.484  Sum_probs=142.6

Q ss_pred             CCCeEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeee
Q 014884          202 APDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHC  281 (416)
Q Consensus       202 g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C  281 (416)
                      ++|++++|.|||+|||+|+++++.+++.  |                                                 
T Consensus         2 ~~d~~~~l~islee~~~G~~k~i~i~~~--c-------------------------------------------------   30 (181)
T 3agx_A            2 DPPVTHDLRVSLEEIYSGCTKKMKISHK--R-------------------------------------------------   30 (181)
T ss_dssp             ----CEEEEECHHHHHHCEEEEEEEEEE--E-------------------------------------------------
T ss_pred             CCCEEEEEEEEHHHhcCCcEEEEEEecc--c-------------------------------------------------
Confidence            4789999999999999999999987532  2                                                 


Q ss_pred             eEeeCCcEEeceEEEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcC
Q 014884          282 MTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILG  361 (416)
Q Consensus       282 ~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G  361 (416)
                      ..|+|.|++.+.++++|+||||+++|++|+|+|+|++++ ++.+|||||+|+++||+.|+|+|+||+++++|+|.||++|
T Consensus        31 ~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~-~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAllG  109 (181)
T 3agx_A           31 LNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTS-NNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCG  109 (181)
T ss_dssp             ECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCS-SSCCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHC
T ss_pred             CCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCC-CCCcccEEEEEEEeccccceeeCCcEEEEEEcCHHHHhCC
Confidence            233333445667899999999999999999999999976 6789999999999999999999999999999999999999


Q ss_pred             CeeEEecCCCe-EEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          362 GKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       362 ~~~~i~~ldg~-~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      ++++|+|+||+ +.|+||+++++|++++|+|+|||..+.++.+|||||+|+|+||+
T Consensus       110 ~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~  165 (181)
T 3agx_A          110 CTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPE  165 (181)
T ss_dssp             EEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCS
T ss_pred             CEEEeECCCCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCC
Confidence            99999999995 89999999999999999999999865444679999999999995

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=7.6e-41  Score=300.18  Aligned_cols=163  Identities=21%  Similarity=0.351  Sum_probs=148.6

Q ss_pred             cCCCeEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeee
Q 014884          201 FAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH  280 (416)
Q Consensus       201 ~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~  280 (416)
                      +++|++++|.|||+|||+|+++++.+++.+.|+.                                              
T Consensus         2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~----------------------------------------------   35 (180)
T 2q2g_A            2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH----------------------------------------------   35 (180)
T ss_dssp             --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT----------------------------------------------
T ss_pred             CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC----------------------------------------------
Confidence            4789999999999999999999999999888741                                              


Q ss_pred             eeEeeCCcEEeceEEEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhc
Q 014884          281 CMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAIL  360 (416)
Q Consensus       281 C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~  360 (416)
                             |++.+.++++|.||||+++|++|+|+|+|+++.+|+.+|||||+|+++||+.|+|+|+||+++++|+|.||++
T Consensus        36 -------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAll  108 (180)
T 2q2g_A           36 -------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVTIPLVRALT  108 (180)
T ss_dssp             -------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHH
T ss_pred             -------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEEEEcCHHHHhC
Confidence                   2345678999999999999999999999999666889999999999999999999999999999999999999


Q ss_pred             CCeeEEecCCCe-EEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          361 GGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       361 G~~~~i~~ldg~-~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      |++++|+||||+ +.|++|++++||++++|+|+|||..+.++.+|||||+|+|+||+
T Consensus       109 G~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~  165 (180)
T 2q2g_A          109 GFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPK  165 (180)
T ss_dssp             CEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCS
T ss_pred             CCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCC
Confidence            999999999995 89999999999999999999999865445689999999999995

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=100.00  E-value=2.9e-39  Score=287.31  Aligned_cols=158  Identities=22%  Similarity=0.380  Sum_probs=143.2

Q ss_pred             CCeEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeee
Q 014884          203 PDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCM  282 (416)
Q Consensus       203 ~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~  282 (416)
                      +|++++|.|||+|||+|+++++.+++..    +                                               
T Consensus         1 ~d~~~~l~islee~~~G~~k~i~~~~~~----~-----------------------------------------------   29 (170)
T 1c3g_A            1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG----P-----------------------------------------------   29 (170)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEE----T-----------------------------------------------
T ss_pred             CCEEEEEEeEHHHhhCCcEEEEEEEEec----C-----------------------------------------------
Confidence            4789999999999999999999997651    0                                               


Q ss_pred             EeeCCcEEeceEEEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCC
Q 014884          283 TCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGG  362 (416)
Q Consensus       283 ~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~  362 (416)
                          .|.+ +.++++|.||||+++|++|+|+|+|+++.+|+.+|||||+|+++||+.|+|+|+||+++++|++.+|++|+
T Consensus        30 ----~G~~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~  104 (170)
T 1c3g_A           30 ----HGAS-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGF  104 (170)
T ss_dssp             ----TTEE-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEECCBHHHHHHCE
T ss_pred             ----CCcE-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEEcCHHHHhCCC
Confidence                0122 45789999999999999999999999777788999999999999999999999999999999999999999


Q ss_pred             eeEEecCCCe-EEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          363 KVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       363 ~~~i~~ldg~-~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      +++|+|+||+ +.|++|+++++|++++|+|+|||..+.++.+|||||+|+|.||+
T Consensus       105 ~~~v~tldG~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~  159 (170)
T 1c3g_A          105 SKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPI  159 (170)
T ss_dssp             EEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCS
T ss_pred             eEEeeCCCCCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCC
Confidence            9999999996 89999999999999999999999864444679999999999995

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}

Probab=99.88  E-value=3.6e-23  Score=169.67  Aligned_cols=79  Identities=33%  Similarity=0.581  Sum_probs=74.0

Q ss_pred             EeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEc
Q 014884          335 ADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNF  414 (416)
Q Consensus       335 ~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~  414 (416)
                      +||+.|+|+|+||+++++|+|.||++|++++|+|+||.+.|+||+++++|++++|+|+|||..+   .+|||||+|+|+|
T Consensus         2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~~~v~ip~g~~~G~~~rl~G~G~p~~~---~~GDL~v~~~V~~   78 (109)
T 3i38_A            2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSKT---HTGDLFAVIKIVM   78 (109)
T ss_dssp             --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEEEETTCSCBCSS---CBCCEEEEEEECC
T ss_pred             CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCCEEEeeCCCcCcCeEEEECCccCCCCC---CCcCEEEEEEEEC
Confidence            6899999999999999999999999999999999999999999999999999999999999843   5799999999999


Q ss_pred             CC
Q 014884          415 PT  416 (416)
Q Consensus       415 P~  416 (416)
                      |+
T Consensus        79 P~   80 (109)
T 3i38_A           79 PT   80 (109)
T ss_dssp             CS
T ss_pred             CC
Confidence            95

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=99.86  E-value=1.4e-22  Score=165.00  Aligned_cols=73  Identities=49%  Similarity=0.802  Sum_probs=68.4

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE  153 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~  153 (416)
                      ..|||+||||+++|+.+|||+|||+|++++|||+++++++++++|++|++||++|+||.+|+.||.++..+..
T Consensus         2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~   74 (103)
T 1bq0_A            2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFE   74 (103)
T ss_dssp             CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSC
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhc
Confidence            4699999999999999999999999999999999987788999999999999999999999999999876654

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.86  E-value=6.6e-22  Score=153.15  Aligned_cols=73  Identities=56%  Similarity=0.853  Sum_probs=68.2

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG  151 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g  151 (416)
                      ....|||+||||+++|+.++||+|||+|++++|||+++++++++++|++|++||++|+||.+|+.||.++..+
T Consensus         4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~   76 (79)
T 2dn9_A            4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP   76 (79)
T ss_dssp             SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred             CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence            4467999999999999999999999999999999999887889999999999999999999999999997654

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}

Probab=99.84  E-value=3.8e-21  Score=160.76  Aligned_cols=77  Identities=32%  Similarity=0.626  Sum_probs=68.6

Q ss_pred             CcCCCCCceEEEEecCHHHHhcCCeeEEecCCCe-EEEEeCCC--CCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcC
Q 014884          339 IFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG--VQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP  415 (416)
Q Consensus       339 ~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~-~~v~ip~g--~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P  415 (416)
                      .|+|+|+||+++++|+|.+|++|++++|+|+||+ +.|+||+|  +++|++++|+|+|||..+.+ .+|||||+|+|.||
T Consensus         1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P   79 (121)
T 1xao_A            1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP   79 (121)
T ss_dssp             CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred             CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence            4899999999999999999999999999999996 89999999  99999999999999986543 57999999999999


Q ss_pred             C
Q 014884          416 T  416 (416)
Q Consensus       416 ~  416 (416)
                      +
T Consensus        80 ~   80 (121)
T 1xao_A           80 E   80 (121)
T ss_dssp             C
T ss_pred             C
Confidence            5

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.84  E-value=2.8e-21  Score=148.85  Aligned_cols=71  Identities=45%  Similarity=0.776  Sum_probs=65.9

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS  152 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~  152 (416)
                      ..|||+||||+++||.++||+||++|++++|||++++ +.++++|++|++||++|+||.+|+.||.++..|.
T Consensus         2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   72 (77)
T 1hdj_A            2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGL   72 (77)
T ss_dssp             CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGC
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccc
Confidence            4699999999999999999999999999999999974 6788999999999999999999999999976554

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.84  E-value=3.3e-21  Score=150.27  Aligned_cols=73  Identities=47%  Similarity=0.734  Sum_probs=66.8

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG  151 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g  151 (416)
                      +...|||+||||+++++.+|||+|||+|++++|||+++... .++++|++|++||++|+||.+|+.||.++..+
T Consensus         6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~   79 (82)
T 2ej7_A            6 SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGP   79 (82)
T ss_dssp             SSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCS
T ss_pred             CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence            44579999999999999999999999999999999998653 68889999999999999999999999987654

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=3.9e-21  Score=151.88  Aligned_cols=72  Identities=51%  Similarity=0.858  Sum_probs=66.5

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG  151 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g  151 (416)
                      ....|||+||||+++|+.+|||+|||+|++++|||+++ +++++++|++|++||++|+||.+|+.||.++..+
T Consensus         4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~   75 (88)
T 2ctr_A            4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDTLGHSA   75 (88)
T ss_dssp             CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHH
T ss_pred             CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence            34579999999999999999999999999999999998 5788999999999999999999999999986543

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=5.1e-21  Score=147.76  Aligned_cols=72  Identities=44%  Similarity=0.713  Sum_probs=66.5

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG  151 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g  151 (416)
                      ....|||+||||+++|+.+|||+|||+|++++|||+++ .+.+.++|++|++||++|+||.+|+.||.++..+
T Consensus         4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~   75 (78)
T 2ctp_A            4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNH-APGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP   75 (78)
T ss_dssp             SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCS-SHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred             CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence            34579999999999999999999999999999999997 4788999999999999999999999999987654

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=3.5e-21  Score=155.49  Aligned_cols=72  Identities=39%  Similarity=0.638  Sum_probs=67.4

Q ss_pred             CCCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 014884           77 CYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR  148 (416)
Q Consensus        77 ~~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~  148 (416)
                      ..++..|||+||||+++|+.+|||+|||+|+++||||+++++++++++|++|++||++|+||.+|+.||...
T Consensus        12 ~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l   83 (99)
T 2yua_A           12 CSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGL   83 (99)
T ss_dssp             CSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTC
T ss_pred             CCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhc
Confidence            346678999999999999999999999999999999999878889999999999999999999999999863

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=8.1e-21  Score=151.34  Aligned_cols=74  Identities=45%  Similarity=0.710  Sum_probs=67.2

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS  152 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~  152 (416)
                      ....|||+||||+++++.+|||+|||+|+++||||+++.. +.++++|++|++||++|+||.+|+.||..+..+.
T Consensus         6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (92)
T 2dmx_A            6 SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSW   80 (92)
T ss_dssp             CCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSS
T ss_pred             CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence            3457999999999999999999999999999999999865 4688999999999999999999999999976553

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.82  E-value=6.9e-21  Score=157.26  Aligned_cols=74  Identities=36%  Similarity=0.560  Sum_probs=69.0

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS  152 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~  152 (416)
                      ....|||+||||+++|+.+|||+|||+|++++|||+++++++++++|++|++||++|+||.+|+.||.++..+.
T Consensus        17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~   90 (112)
T 2ctq_A           17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQM   90 (112)
T ss_dssp             CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTC
T ss_pred             cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhcc
Confidence            45689999999999999999999999999999999998778899999999999999999999999999976553

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}

Probab=99.82  E-value=1.2e-20  Score=148.97  Aligned_cols=71  Identities=48%  Similarity=0.792  Sum_probs=65.9

Q ss_pred             CcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 014884           80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG  151 (416)
Q Consensus        80 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g  151 (416)
                      ...|||+||||+++|+.+|||+|||+|++++|||++++ +.++++|++|++||++|+||.+|..||.++..+
T Consensus        15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~   85 (88)
T 2cug_A           15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD-PGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP   85 (88)
T ss_dssp             SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS-TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred             CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence            45799999999999999999999999999999999974 678999999999999999999999999997543

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A

Probab=99.82  E-value=1.4e-20  Score=143.30  Aligned_cols=68  Identities=38%  Similarity=0.702  Sum_probs=61.9

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS  149 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~  149 (416)
                      ....+||+||||+++|+.++||+||++|++++|||++++.   .++|++|++||++|+||.+|+.||.+|.
T Consensus         5 ~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~   72 (73)
T 2och_A            5 VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGE   72 (73)
T ss_dssp             -CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred             cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence            3457999999999999999999999999999999998754   5899999999999999999999999864

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.81  E-value=1.1e-20  Score=155.09  Aligned_cols=73  Identities=45%  Similarity=0.735  Sum_probs=68.2

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG  151 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g  151 (416)
                      ....+||+||||+++|+.+|||+|||+|++++|||+++++++++++|++|++||++|+||.+|+.||.++..|
T Consensus        14 ~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~   86 (109)
T 2ctw_A           14 TSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLG   86 (109)
T ss_dssp             SCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHH
T ss_pred             CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccc
Confidence            4567999999999999999999999999999999999888889999999999999999999999999986544

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}

Probab=99.81  E-value=2.4e-20  Score=150.31  Aligned_cols=72  Identities=47%  Similarity=0.738  Sum_probs=64.7

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCC
Q 014884           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE  153 (416)
Q Consensus        82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~  153 (416)
                      .|||+||||+++|+.+|||+|||+|++++|||++++. +.++++|++|++||++|+||.+|+.||.++..+..
T Consensus         2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~   74 (99)
T 2lgw_A            2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLT   74 (99)
T ss_dssp             CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC---
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence            5899999999999999999999999999999999865 45889999999999999999999999999766543

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}

Probab=99.81  E-value=1.5e-20  Score=149.71  Aligned_cols=70  Identities=37%  Similarity=0.663  Sum_probs=64.2

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG  151 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g  151 (416)
                      ....|||+||||+++|+.+|||+|||+|++++|||+++.+   .++|++|++||++|+||.+|+.||.++..+
T Consensus         5 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~   74 (92)
T 2o37_A            5 VKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGLEA   74 (92)
T ss_dssp             CSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCHHH
T ss_pred             ccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCHHH
Confidence            4567999999999999999999999999999999999765   579999999999999999999999987544

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1

Probab=99.80  E-value=2.9e-20  Score=148.73  Aligned_cols=71  Identities=32%  Similarity=0.597  Sum_probs=65.0

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------hhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN------PSAKRKFQEIRDAYETLRDSEKRAQYDRRRS  149 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~  149 (416)
                      +...|||+||||+++|+.+|||+|||+|+++||||+++.+      +.++++|++|++||++|+||.+|+.||....
T Consensus        13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~   89 (94)
T 1wjz_A           13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS   89 (94)
T ss_dssp             SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred             CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence            4568999999999999999999999999999999998743      4588999999999999999999999999753

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.77  E-value=2e-20  Score=152.40  Aligned_cols=99  Identities=32%  Similarity=0.658  Sum_probs=89.3

Q ss_pred             CCCeEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeC--C--CcccCCCCCCceEEe
Q 014884          202 APDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--P--FTSTCSTCKGLGRII  277 (416)
Q Consensus       202 g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--~--~~~~C~~C~G~G~~~  277 (416)
                      |.|+.++|.|+|+|||+|.++++.+.+.+.|+.|+|+|...+....+|+.|+|+|++...  +  ++++|+.|+|.|+++
T Consensus         1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i   80 (104)
T 2ctt_A            1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSII   80 (104)
T ss_dssp             CCCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEEC
T ss_pred             CCceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceEC
Confidence            467889999999999999999999999999999999999888888999999999987532  2  367999999999999


Q ss_pred             eeeeeEeeCCcEEeceEEEEEEe
Q 014884          278 KDHCMTCKGSGVVDGVKEVKVTI  300 (416)
Q Consensus       278 ~~~C~~C~g~G~~~~~~~l~V~I  300 (416)
                      +++|..|+|.|++.+.++|+|++
T Consensus        81 ~~~C~~C~G~G~v~~~k~l~V~~  103 (104)
T 2ctt_A           81 ISPCVVCRGAGQAKQKKRSGPSS  103 (104)
T ss_dssp             SSCCSSSSSCSEECCCCSSCCSC
T ss_pred             CCcCCCCCCeeEEEEEEEEEEEc
Confidence            99999999999999988887764

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}

Probab=99.76  E-value=2.8e-19  Score=146.90  Aligned_cols=70  Identities=34%  Similarity=0.576  Sum_probs=64.6

Q ss_pred             CcCCcccccCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC---ChhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 014884           80 SKRDPYELLGVPENA-SQDEIKKAFHMLAKQYHPDANKN---NPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS  149 (416)
Q Consensus        80 ~~~~~y~iLgv~~~a-~~~eik~ayr~la~~~HPD~~~~---~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~  149 (416)
                      ...|||+||||+++| +.+|||+|||+|++++|||++++   .+.++++|++|++||++|+||.+|+.||.++.
T Consensus        13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~   86 (109)
T 2qsa_A           13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD   86 (109)
T ss_dssp             TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence            457999999999999 99999999999999999999975   35688999999999999999999999999853

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}

Probab=99.74  E-value=2.3e-18  Score=156.76  Aligned_cols=100  Identities=18%  Similarity=0.329  Sum_probs=74.3

Q ss_pred             ccccccccccccccccccCCCchhhhhhcccccCCCCCCcCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCh
Q 014884           42 HKRGLYYCSSVTGTLADFGTTGMFLARRCIHATGSCYSSKRDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNP  119 (416)
Q Consensus        42 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~iLgv~~~--a~~~eik~ayr~la~~~HPD~~~~~~  119 (416)
                      ....||+|+.....   . ....+++..|...  +++....|||+||||+++  ++.++||+|||+|+++||||++++.+
T Consensus         9 ~~~~Cw~C~~~~~~---~-~~~~~fC~~c~~~--q~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~   82 (207)
T 3bvo_A            9 NYPRCWNCGGPWGP---G-REDRFFCPQCRAL--QAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRS   82 (207)
T ss_dssp             --CBCSSSCCBCCS---S-CSCCCBCTTTCCB--CCCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSC
T ss_pred             CCCCCCCCCCCccc---c-ccccccccccccc--CCCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            45679999864210   0 1122334334332  223346799999999986  79999999999999999999988654


Q ss_pred             h-----HHHHHHHHHHHHHHhhhhhhhhhhccc
Q 014884          120 S-----AKRKFQEIRDAYETLRDSEKRAQYDRR  147 (416)
Q Consensus       120 ~-----a~~~f~~i~~Ay~~L~d~~~r~~yd~~  147 (416)
                      +     |.++|++||+||+||+||.+|+.||..
T Consensus        83 ~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~  115 (207)
T 3bvo_A           83 QTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLK  115 (207)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence            2     567899999999999999999999975

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=99.74  E-value=1.3e-18  Score=159.31  Aligned_cols=72  Identities=46%  Similarity=0.760  Sum_probs=67.8

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCC
Q 014884           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE  153 (416)
Q Consensus        82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~  153 (416)
                      .|||+||||+++|+.+|||+|||+|++++|||+++++++++++|++|++||++|+||.+|+.||+++..+..
T Consensus         2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~   73 (210)
T 3apq_A            2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE   73 (210)
T ss_dssp             CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCC
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccc
Confidence            589999999999999999999999999999999988888999999999999999999999999999876543

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.73  E-value=2.3e-18  Score=136.39  Aligned_cols=62  Identities=32%  Similarity=0.552  Sum_probs=58.1

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhh
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQ  143 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~  143 (416)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++. +.++++|++|++||++|+||.+|+.
T Consensus        26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~   87 (90)
T 2ys8_A           26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA-PGSEDAFKAVVNARTALLKNIKSGP   87 (90)
T ss_dssp             CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC-TTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCcccccC
Confidence            4799999999999999999999999999999999974 6788999999999999999999874

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}

Probab=99.73  E-value=2.3e-18  Score=150.50  Aligned_cols=70  Identities=31%  Similarity=0.588  Sum_probs=64.1

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh------hHHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP------SAKRKFQEIRDAYETLRDSEKRAQYDRRR  148 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~------~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~  148 (416)
                      +...|||+||||+++|+.++||+|||+|++++|||++++.+      .|.++|++|++||++|+||.+|+.||..+
T Consensus         7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~   82 (155)
T 2l6l_A            7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQR   82 (155)
T ss_dssp             CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHH
T ss_pred             CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence            45679999999999999999999999999999999987653      36789999999999999999999999864

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.73  E-value=1.7e-18  Score=136.09  Aligned_cols=68  Identities=21%  Similarity=0.238  Sum_probs=60.8

Q ss_pred             CCCCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHHhhhhhhhhh
Q 014884           76 SCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQ  143 (416)
Q Consensus        76 ~~~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~~L~d~~~r~~  143 (416)
                      ...+...++|+||||+++||.+|||+|||+|+++||||++++++ +|+++|++|++||++|+|...|..
T Consensus        10 ~~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~   78 (88)
T 1iur_A           10 PRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQ   78 (88)
T ss_dssp             CSSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred             CCCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccccc
Confidence            34456689999999999999999999999999999999998763 588999999999999999988743

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1

Probab=99.70  E-value=1.1e-17  Score=129.07  Aligned_cols=60  Identities=18%  Similarity=0.344  Sum_probs=55.7

Q ss_pred             CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhc
Q 014884           82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYD  145 (416)
Q Consensus        82 ~~~y~iLgv~~~--a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd  145 (416)
                      .++|+||||+++  ++.++||+|||+||+++|||++++    .++|++|++||++|+|+.+|..++
T Consensus        11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~~~   72 (79)
T 1faf_A           11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRMN   72 (79)
T ss_dssp             HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHHHh
Confidence            589999999999  999999999999999999999864    589999999999999999998844

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1

Probab=99.69  E-value=2.5e-18  Score=141.60  Aligned_cols=65  Identities=23%  Similarity=0.390  Sum_probs=60.3

Q ss_pred             cCCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 014884           81 KRDPYELLGVPENASQ--DEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS  149 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~--~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~  149 (416)
                      ..+||+||||+++|+.  ++||+|||+||+++|||++++    +++|++|++||++|+||.+|+.||.++.
T Consensus         7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~   73 (114)
T 1gh6_A            7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG   73 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred             hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence            3689999999999999  999999999999999999875    4799999999999999999999998753

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C

Probab=99.68  E-value=6.5e-18  Score=148.56  Aligned_cols=65  Identities=23%  Similarity=0.386  Sum_probs=57.7

Q ss_pred             cCCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 014884           81 KRDPYELLGVPENAS--QDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS  149 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~--~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~  149 (416)
                      ..|||+||||+++|+  .+|||+|||+||+++|||++++    +++|++|++||++|+||.+|+.||++|.
T Consensus        10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~   76 (174)
T 2pf4_E           10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG   76 (174)
T ss_dssp             HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred             cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence            368999999999998  6999999999999999999875    3789999999999999999999999874

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J

Probab=99.66  E-value=3.8e-17  Score=144.52  Aligned_cols=65  Identities=22%  Similarity=0.471  Sum_probs=60.1

Q ss_pred             CcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChh---HHHHHHHHHHHHHHhhhhhhhhhh
Q 014884           80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYETLRDSEKRAQY  144 (416)
Q Consensus        80 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~---a~~~f~~i~~Ay~~L~d~~~r~~y  144 (416)
                      ...|||+||||+++|+.+|||+|||+|++++|||++++.+.   |+++|++|++||++|+||.+|+.|
T Consensus       115 ~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y  182 (182)
T 1n4c_A          115 AGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY  182 (182)
T ss_dssp             TTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             CccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence            34699999999999999999999999999999999876553   889999999999999999999987

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1

Probab=99.66  E-value=3.7e-17  Score=144.66  Aligned_cols=67  Identities=30%  Similarity=0.480  Sum_probs=61.5

Q ss_pred             CcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 014884           83 DPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRRS  149 (416)
Q Consensus        83 ~~y~iLgv~~~a--~~~eik~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~  149 (416)
                      |||+||||++++  |.++||++||+|+++||||++++.++     |.++|+.||+||+||+||.+|+.||....
T Consensus         2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~   75 (171)
T 1fpo_A            2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH   75 (171)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred             CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence            799999999999  99999999999999999999986543     56799999999999999999999999743

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A

Probab=99.64  E-value=7.1e-17  Score=127.17  Aligned_cols=56  Identities=21%  Similarity=0.440  Sum_probs=52.0

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---hHHHHHHHHHHHHHHhhh
Q 014884           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP---SAKRKFQEIRDAYETLRD  137 (416)
Q Consensus        82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~---~a~~~f~~i~~Ay~~L~d  137 (416)
                      .++|++|||+++||.+|||+|||++|++||||++++++   .|+++|++|++||+||.+
T Consensus        33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~   91 (92)
T 2qwo_B           33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN   91 (92)
T ss_dssp             CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence            58999999999999999999999999999999998654   388999999999999986

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=99.63  E-value=1.4e-16  Score=120.33  Aligned_cols=59  Identities=15%  Similarity=0.278  Sum_probs=53.1

Q ss_pred             CCcCCcccccCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhh
Q 014884           79 SSKRDPYELLGVPE-NASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR  141 (416)
Q Consensus        79 ~~~~~~y~iLgv~~-~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r  141 (416)
                      +...++|+||||++ +++.+|||+|||+|++++|||++++    .++|++|++||++|+|+..|
T Consensus        11 m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~----~~~f~~i~~Aye~L~~~~~r   70 (71)
T 2guz_A           11 MNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS----PFLATKINEAKDFLEKRGIS   70 (71)
T ss_dssp             CCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC----HHHHHHHHHHHHHHHHHCCC
T ss_pred             CCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC----HHHHHHHHHHHHHHhhhhhc
Confidence            44569999999999 7999999999999999999999753    46999999999999998766

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A

Probab=99.60  E-value=2.7e-16  Score=140.11  Aligned_cols=67  Identities=28%  Similarity=0.483  Sum_probs=60.3

Q ss_pred             CCcCCccccc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 014884           79 SSKRDPYELL------GVPE-NASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR  148 (416)
Q Consensus        79 ~~~~~~y~iL------gv~~-~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~  148 (416)
                      ....|||+||      |+++ +||.++||+|||+|++++|||++++   +.++|++|++||+||+||.+|+.||...
T Consensus         8 ~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~l   81 (181)
T 3uo3_A            8 RFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLKL   81 (181)
T ss_dssp             CCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred             CCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence            3457999999      4665 8999999999999999999999975   5689999999999999999999999965

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}

Probab=99.59  E-value=3.1e-16  Score=127.44  Aligned_cols=59  Identities=14%  Similarity=0.222  Sum_probs=52.2

Q ss_pred             CcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---Ch----hHHHHHHHHHHHHHHhhhhh
Q 014884           80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN---NP----SAKRKFQEIRDAYETLRDSE  139 (416)
Q Consensus        80 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~---~~----~a~~~f~~i~~Ay~~L~d~~  139 (416)
                      ...|||+||+++. ||.+|||+|||+||+++|||++++   ++    .|+++|++|++||++|+|+.
T Consensus        39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~  104 (106)
T 3ag7_A           39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG  104 (106)
T ss_dssp             TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence            4579999999996 999999999999999999999763   22    47899999999999999975

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}

Probab=99.55  E-value=4.8e-16  Score=168.79  Aligned_cols=75  Identities=44%  Similarity=0.730  Sum_probs=40.9

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCC
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE  153 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~  153 (416)
                      ....|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||++|+||.+|+.||++|..|..
T Consensus        18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~   92 (780)
T 3apo_A           18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE   92 (780)
T ss_dssp             -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC------
T ss_pred             CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccc
Confidence            456799999999999999999999999999999999987788999999999999999999999999999876654

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=99.31  E-value=2.3e-12  Score=120.69  Aligned_cols=130  Identities=25%  Similarity=0.402  Sum_probs=93.1

Q ss_pred             EEEEeeeeecccCcceeeee-eeeeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceEE
Q 014884          207 VELVLSFAEAAKGCTKHVSF-DAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRI  276 (416)
Q Consensus       207 ~~l~isl~e~~~G~~~~~~~-~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~  276 (416)
                      .++.++-...+..|...-.- .....|+.|+|+|....         ....+|+.|+|.|.+.  ....+|..|+|.|.+
T Consensus        31 k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i--~~~~~C~~C~G~g~~  108 (248)
T 1nlt_A           31 AKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDII--DPKDRCKSCNGKKVE  108 (248)
T ss_dssp             EEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCC--CTTSBCSSSTTSCEE
T ss_pred             EEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEEe--ccCCCCcccCCCceE
Confidence            34555555554433322110 11378999999997421         2356899999999862  126799999999998


Q ss_pred             eeeeeeEeeCC-cEEeceE-------------------------------------------------------------
Q 014884          277 IKDHCMTCKGS-GVVDGVK-------------------------------------------------------------  294 (416)
Q Consensus       277 ~~~~C~~C~g~-G~~~~~~-------------------------------------------------------------  294 (416)
                      .+.+-.+...+ |+.++++                                                             
T Consensus       109 ~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG  188 (248)
T 1nlt_A          109 NERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSG  188 (248)
T ss_dssp             EEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCBCCEEECSSS
T ss_pred             eeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEEEEEeCHHHHhcCCEEEEeCCCC
Confidence            77666666664 5555544                                                             


Q ss_pred             -EEEEEeccc--ccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCC
Q 014884          295 -EVKVTIPAG--VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDP  338 (416)
Q Consensus       295 -~l~V~Ip~G--~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~  338 (416)
                       .++|.||||  +++|++++|+|+|.+...+...|||||+|+|.-..
T Consensus       189 ~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~  235 (248)
T 1nlt_A          189 DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPE  235 (248)
T ss_dssp             CEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC
T ss_pred             CEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCC
Confidence             689999999  99999999999999865443579999999999443

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=99.27  E-value=1.3e-12  Score=100.65  Aligned_cols=74  Identities=38%  Similarity=0.885  Sum_probs=64.1

Q ss_pred             CcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEec
Q 014884          219 GCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDG  292 (416)
Q Consensus       219 G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~  292 (416)
                      |.+++|.+.+.+.|+.|+|+|........+|+.|+|+|++...    .++.+|+.|+|.|++++++|..|+|.|++.+
T Consensus         1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~G~~~~   78 (79)
T 1exk_A            1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVER   78 (79)
T ss_dssp             CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECSSBCGGGTTSSEEEC
T ss_pred             CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEECCCcCCCCCCeEEEee
Confidence            5678899999999999999998776667899999999987532    1356899999999999999999999998754

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A

Probab=98.92  E-value=5.7e-10  Score=110.95  Aligned_cols=65  Identities=46%  Similarity=0.710  Sum_probs=55.8

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---hhHHHHHHHHHHHHHHhhhhhhhhhhcc
Q 014884           82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN---PSAKRKFQEIRDAYETLRDSEKRAQYDR  146 (416)
Q Consensus        82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~---~~a~~~f~~i~~Ay~~L~d~~~r~~yd~  146 (416)
                      .++|++||+.+.++.++|+++|+++++++|||+.+..   .+++++|++|++||++|+||.+|..||+
T Consensus       382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~  449 (450)
T 2y4t_A          382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD  449 (450)
T ss_dssp             CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred             hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence            4899999999999999999999999999999998754   3488999999999999999999999997

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=98.85  E-value=2e-09  Score=78.90  Aligned_cols=53  Identities=17%  Similarity=0.226  Sum_probs=46.5

Q ss_pred             CCcccccCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhh
Q 014884           82 RDPYELLGVPEN---ASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS  138 (416)
Q Consensus        82 ~~~y~iLgv~~~---a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~  138 (416)
                      .+.|.||||+++   ++.++|+++||+|....|||+.++    .-...+|++|++.|...
T Consensus         4 ~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS----~yl~~ki~~Ake~l~~~   59 (65)
T 2guz_B            4 DESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS----FYLQSKVYRAAERLKWE   59 (65)
T ss_dssp             HHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC----HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHHHHH
Confidence            356899999999   999999999999999999999864    35667899999999754

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}

Probab=98.80  E-value=4.7e-09  Score=85.54  Aligned_cols=74  Identities=23%  Similarity=0.351  Sum_probs=60.8

Q ss_pred             ccCCCeEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeee
Q 014884          200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD  279 (416)
Q Consensus       200 ~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~  279 (416)
                      +.|.|+.+++.|+|.||+.|+++.+..-                                                    
T Consensus         9 R~G~DL~~~~~Isl~eAl~G~~i~v~tl----------------------------------------------------   36 (109)
T 3i38_A            9 IVGHNLEIVLPLAPWEAALGAKVTVPTL----------------------------------------------------   36 (109)
T ss_dssp             EETTEEEEEEEECHHHHHHCEEEEECCS----------------------------------------------------
T ss_pred             EECCEEEEEEEcCHHHHhCCCEEEEEcC----------------------------------------------------
Confidence            4588999999999999999987665420                                                    


Q ss_pred             eeeEeeCCcEEeceEEEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCc
Q 014884          280 HCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIF  340 (416)
Q Consensus       280 ~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f  340 (416)
                                 ++  .++|.||+|+++|++++++|+|.+. .+ ..|||||+|+|.-....
T Consensus        37 -----------dG--~~~v~ip~g~~~G~~~rl~G~G~p~-~~-~~GDL~v~~~V~~P~~L   82 (109)
T 3i38_A           37 -----------KE--SILLTVPPGSQAGQRLRIKGKGLVS-KT-HTGDLFAVIKIVMPTKP   82 (109)
T ss_dssp             -----------SS--CEEEEECTTCCTTCEEEETTCSCBC-SS-CBCCEEEEEEECCCSSC
T ss_pred             -----------CC--CEEEeeCCCcCcCeEEEECCccCCC-CC-CCcCEEEEEEEECCCCC
Confidence                       11  3689999999999999999999987 34 78999999999854443

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=98.74  E-value=1.7e-08  Score=89.80  Aligned_cols=69  Identities=20%  Similarity=0.284  Sum_probs=57.7

Q ss_pred             CCCceEEEEecCHHHHhcCCeeEEecCC------------CeEEEEeCCCCCCCcEEEEcCCCcC-CCCCCCCCCcEEEE
Q 014884          343 DGADVYVDSNISFTQAILGGKVDVPTLS------------GKVQVKIPKGVQPGQLLVLRGKGLA-KNGLFLDHGDQYVR  409 (416)
Q Consensus       343 ~G~DL~~~~~I~l~~Al~G~~~~i~~ld------------g~~~v~ip~g~~~g~~~~l~g~G~p-~~~~~~~~Gdl~v~  409 (416)
                      +|.|+.+++.|||.||+.|++++|....            ..++|+||+|+.+|++|+++|+|-+ ..+.  ..|||||+
T Consensus         2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg--~~GDl~v~   79 (180)
T 2q2g_A            2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGT--SPGDLVLI   79 (180)
T ss_dssp             --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTEEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTS--CCCEEEEE
T ss_pred             CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCC--ccccEEEE
Confidence            3789999999999999999998887532            3478999999999999999999987 4442  46999999


Q ss_pred             EEEE
Q 014884          410 FRVN  413 (416)
Q Consensus       410 ~~v~  413 (416)
                      +++.
T Consensus        80 i~~~   83 (180)
T 2q2g_A           80 IQTK   83 (180)
T ss_dssp             EEEC
T ss_pred             EEEE
Confidence            9885

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}

Probab=98.72  E-value=1.8e-08  Score=83.61  Aligned_cols=76  Identities=20%  Similarity=0.140  Sum_probs=58.4

Q ss_pred             ccCCCeEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeee
Q 014884          200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD  279 (416)
Q Consensus       200 ~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~  279 (416)
                      +.|.|+.+++.|+|.+|+.|++..+..-                                                    
T Consensus         4 R~G~DL~~~~~Isl~eAllG~~i~v~tl----------------------------------------------------   31 (121)
T 1xao_A            4 RDGDDLVYEAEIDLLTAIAGGEFALEHV----------------------------------------------------   31 (121)
T ss_dssp             EETTEEEEEEEEEHHHHHHCEEEEEECT----------------------------------------------------
T ss_pred             EECCeEEEEEEcCHHHHhCCCEEEEecC----------------------------------------------------
Confidence            4589999999999999999987665410                                                    


Q ss_pred             eeeEeeCCcEEeceEEEEEEeccc--ccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCC
Q 014884          280 HCMTCKGSGVVDGVKEVKVTIPAG--VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPI  339 (416)
Q Consensus       280 ~C~~C~g~G~~~~~~~l~V~Ip~G--~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~  339 (416)
                                  ..+.++|.||+|  +++|++++++|+|.+...+...|||||+++|.-...
T Consensus        32 ------------dG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~   81 (121)
T 1xao_A           32 ------------SGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPEN   81 (121)
T ss_dssp             ------------TSCEEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCT
T ss_pred             ------------CCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCC
Confidence                        012578999999  999999999999998654436799999999995443

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=98.72  E-value=2.3e-08  Score=88.13  Aligned_cols=68  Identities=13%  Similarity=0.202  Sum_probs=56.9

Q ss_pred             CceEEEEecCHHHHhcCCeeEEecC----CC-----eEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEE
Q 014884          345 ADVYVDSNISFTQAILGGKVDVPTL----SG-----KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVN  413 (416)
Q Consensus       345 ~DL~~~~~I~l~~Al~G~~~~i~~l----dg-----~~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~  413 (416)
                      .|+.+++.|||.||+.|++++|...    .|     .++|+||+|+.+|++|+++|+|-+.... +..|||||++++.
T Consensus         1 ~d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g-g~~GDl~v~i~v~   77 (170)
T 1c3g_A            1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQT-GRRKTLQFVIQEK   77 (170)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSSS-SCBCEEEEEEEEC
T ss_pred             CCEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCCccCCCEEEEeccccCCCCC-CccccEEEEEEEc
Confidence            3899999999999999999988754    12     3799999999999999999999864321 2469999999985

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=98.71  E-value=1.4e-08  Score=98.75  Aligned_cols=72  Identities=22%  Similarity=0.397  Sum_probs=57.6

Q ss_pred             CCCCCceEEEEecCHHHHhcCCeeEEecC------CC--------eEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcE
Q 014884          341 SRDGADVYVDSNISFTQAILGGKVDVPTL------SG--------KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQ  406 (416)
Q Consensus       341 ~r~G~DL~~~~~I~l~~Al~G~~~~i~~l------dg--------~~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl  406 (416)
                      .+.|.||.+++.|+|.||+.|+++.|...      .|        .++|+||+|+++|++||++|+|.|..+. +..|||
T Consensus       137 ~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~g-g~~GDL  215 (329)
T 3lz8_A          137 AARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENG-GPNGDL  215 (329)
T ss_dssp             CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC----CCCCCE
T ss_pred             cCCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCC-CCCCcE
Confidence            35788999999999999999987766543      22        3689999999999999999999986522 246999


Q ss_pred             EEEEEEE
Q 014884          407 YVRFRVN  413 (416)
Q Consensus       407 ~v~~~v~  413 (416)
                      ||+|+|.
T Consensus       216 ~v~I~v~  222 (329)
T 3lz8_A          216 WLVIHIA  222 (329)
T ss_dssp             EEEECCC
T ss_pred             EEEEEEe
Confidence            9998775

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=98.68  E-value=2.9e-08  Score=88.34  Aligned_cols=68  Identities=15%  Similarity=0.190  Sum_probs=54.9

Q ss_pred             CCceEEEEecCHHHHhcCCeeEEecC------CC--------eEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEE
Q 014884          344 GADVYVDSNISFTQAILGGKVDVPTL------SG--------KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVR  409 (416)
Q Consensus       344 G~DL~~~~~I~l~~Al~G~~~~i~~l------dg--------~~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~  409 (416)
                      |.|+.+++.|||.||+.|++++|...      .|        .++|+||+|+.+|++|+++|+|-+..+  +..|||||+
T Consensus         2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~--g~~GDl~v~   79 (181)
T 3agx_A            2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSN--NIPADIVFV   79 (181)
T ss_dssp             ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSS--SCCCCEEEE
T ss_pred             CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCC--CCcccEEEE
Confidence            57999999999999999999887642      23        268999999999999999999988654  346999999


Q ss_pred             EEEE
Q 014884          410 FRVN  413 (416)
Q Consensus       410 ~~v~  413 (416)
                      +++.
T Consensus        80 i~~~   83 (181)
T 3agx_A           80 LKDK   83 (181)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            9885

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.46  E-value=6.4e-05  Score=60.31  Aligned_cols=49  Identities=27%  Similarity=0.694  Sum_probs=38.9

Q ss_pred             eeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeee
Q 014884          228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH  280 (416)
Q Consensus       228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~  280 (416)
                      ....|+.|+|+|....     ....+|+.|+|.|.+    +..+|..|+|.|++.+.+
T Consensus        44 ~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~----i~~~C~~C~G~G~v~~~k   97 (104)
T 2ctt_A           44 KVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSI----IISPCVVCRGAGQAKQKK   97 (104)
T ss_dssp             CCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEE----CSSCCSSSSSCSEECCCC
T ss_pred             CCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceE----CCCcCCCCCCeeEEEEEE
Confidence            3578999999996421     234689999999998    567999999999987543

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=97.40  E-value=5.9e-05  Score=57.26  Aligned_cols=47  Identities=32%  Similarity=0.807  Sum_probs=36.3

Q ss_pred             eeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEee
Q 014884          228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK  278 (416)
Q Consensus       228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~  278 (416)
                      ....|+.|+|+|....     .....|+.|+|.|.+    +..+|+.|+|.|.+.+
T Consensus        27 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~G~~~~   78 (79)
T 1exk_A           27 QPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTL----IKDPCNKCHGHGRVER   78 (79)
T ss_dssp             CCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEE----CSSBCGGGTTSSEEEC
T ss_pred             cCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEE----CCCcCCCCCCeEEEee
Confidence            3568999999996532     123589999999987    4678999999998753

>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}

Probab=97.40  E-value=7.4e-06  Score=85.85  Aligned_cols=70  Identities=17%  Similarity=0.320  Sum_probs=56.1

Q ss_pred             EEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCC---cccccCCCcceeEEEeC-----------------CCcc
Q 014884          206 QVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADA---KTKICSTCRGIGRVTIP-----------------PFTS  265 (416)
Q Consensus       206 ~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~---~~~~C~~C~G~G~~~~~-----------------~~~~  265 (416)
                      .+++.|+|+|++.|.++++.+.+...|..|+|+|...+.   ...+|+.|+|.....-+                 ....
T Consensus       168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~  247 (669)
T 3pmq_A          168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSIS  247 (669)
T ss_dssp             SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTT
T ss_pred             eEEEEEEhHHhhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccC
Confidence            357889999999999999999999999999999998776   57899999998311100                 0135


Q ss_pred             cCCCCCCceE
Q 014884          266 TCSTCKGLGR  275 (416)
Q Consensus       266 ~C~~C~G~G~  275 (416)
                      .|..|+..+.
T Consensus       248 ~C~~CH~~~~  257 (669)
T 3pmq_A          248 NCQTCHADNP  257 (669)
T ss_dssp             CCTTTSCCCT
T ss_pred             cchhhcCCcc
Confidence            7999988764

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=97.36  E-value=3.4e-05  Score=53.79  Aligned_cols=30  Identities=37%  Similarity=0.836  Sum_probs=21.1

Q ss_pred             CcccCCCCCCceEEeeeeeeEeeCCcEEec
Q 014884          263 FTSTCSTCKGLGRIIKDHCMTCKGSGVVDG  292 (416)
Q Consensus       263 ~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~  292 (416)
                      ++++|+.|+|+|.++.++|+.|+|.|++..
T Consensus         8 ~~~~C~~C~GsG~~i~~~C~~C~G~G~v~~   37 (53)
T 3lcz_A            8 LETTCPNCNGSGREEPEPCPKCLGKGVILT   37 (53)
T ss_dssp             HEEECTTTTTSCEETTEECTTTTTSSEEEC
T ss_pred             eeccCcCCcccccCCCCcCCCCCCcEEEEE
Confidence            355677777777777777777777776654

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=96.67  E-value=0.00088  Score=46.58  Aligned_cols=26  Identities=38%  Similarity=0.917  Sum_probs=13.7

Q ss_pred             ccCCCcceeEEEeCCCcccCCCCCCceEEe
Q 014884          248 ICSTCRGIGRVTIPPFTSTCSTCKGLGRII  277 (416)
Q Consensus       248 ~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~  277 (416)
                      +|+.|+|+|.+    +..+|+.|+|.|.+.
T Consensus        11 ~C~~C~GsG~~----i~~~C~~C~G~G~v~   36 (53)
T 3lcz_A           11 TCPNCNGSGRE----EPEPCPKCLGKGVIL   36 (53)
T ss_dssp             ECTTTTTSCEE----TTEECTTTTTSSEEE
T ss_pred             cCcCCcccccC----CCCcCCCCCCcEEEE
Confidence            45555555544    334566666666554

>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*

Probab=96.61  E-value=0.00099  Score=46.31  Aligned_cols=10  Identities=30%  Similarity=0.806  Sum_probs=4.7

Q ss_pred             ecCCCCCCCC
Q 014884          231 PCDSCHGRGF  240 (416)
Q Consensus       231 ~C~~C~G~G~  240 (416)
                      .|+.|+|+|.
T Consensus        11 ~C~~C~GsG~   20 (53)
T 2bx9_A           11 ACPKCERAGE   20 (53)
T ss_dssp             ECTTTTTSSE
T ss_pred             cCCCCcceec
Confidence            4444444443

>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*

Probab=96.58  E-value=0.00051  Score=47.77  Aligned_cols=27  Identities=30%  Similarity=0.818  Sum_probs=14.7

Q ss_pred             cccCCCcceeEEEeCCCcccCCCCCCceEEe
Q 014884          247 KICSTCRGIGRVTIPPFTSTCSTCKGLGRII  277 (416)
Q Consensus       247 ~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~  277 (416)
                      .+|+.|+|+|.+    ...+|+.|+|.|+++
T Consensus        10 ~~C~~C~GsG~~----~~~~C~~C~G~G~v~   36 (53)
T 2bx9_A           10 VACPKCERAGEI----EGTPCPACSGKGVIL   36 (53)
T ss_dssp             EECTTTTTSSEE----TTEECTTTTTSSEEE
T ss_pred             ccCCCCcceecc----CCCCCccCCCCccEE
Confidence            356666666655    234555555555544

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=88.02  E-value=0.3  Score=51.48  Aligned_cols=48  Identities=15%  Similarity=0.267  Sum_probs=37.9

Q ss_pred             CCcCCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHH
Q 014884           79 SSKRDPYELLGVPENASQ--DEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYET  134 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~--~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~  134 (416)
                      ....+||.+||++.++..  .+|++|||+||+..+++        ++++..|..|+.|
T Consensus       626 ~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v  675 (681)
T 2pzi_A          626 DNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV  675 (681)
T ss_dssp             SCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred             ccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence            334569999999776655  67999999999975433        5789999999876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	416
d1wjza_	94	a.2.3.1 (A:) CSL-type zinc finger-containing prote	2e-22
d1xbla_	75	a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain	7e-22
d1fpoa1	76	a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma	1e-18
d1nz6a_	98	a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T	3e-18
d1iura_	88	a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human	8e-18
d1hdja_	77	a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9	2e-17
d1fafa_	79	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	2e-17
d1exka_	79	g.54.1.1 (A:) Cysteine-rich domain of the chaperon	1e-14
d1nlta2	80	b.4.1.1 (A:258-337) Mitochondrial protein import p	1e-14
d1gh6a_	114	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	8e-14
d1c3ga2	90	b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Ba	5e-13
d1c3ga1	80	b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Ba	4e-11
d1nlta3	74	g.54.1.1 (A:139-212) Mitochondrial protein import	2e-10
d1m1qa_	90	a.138.1.3 (A:) Flavocytochrome c3 (respiratory fum	4e-09
d1nlta1	74	b.4.1.1 (A:110-138,A:213-257) Mitochondrial protei	2e-07

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 89.0 bits (220), Expect = 2e-22
 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 6/80 (7%)

Query: 79  SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRK------FQEIRDAY 132
           + K+D Y +LG   +A+  ++K+ +  L   YHPD    +  A         F EI  A+
Sbjct: 13  TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAW 72

Query: 133 ETLRDSEKRAQYDRRRSRGS 152
           + L + E + +YD +RS  S
Sbjct: 73  KILGNEETKKKYDLQRSGPS 92

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 86.6 bits (214), Expect = 7e-22
 Identities = 35/66 (53%), Positives = 50/66 (75%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEK 140
           K+D YE+LGV + A + EI+KA+  LA +YHPD N+ +  A+ KF+EI++AYE L DS+K
Sbjct: 2   KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQK 61

Query: 141 RAQYDR 146
           RA YD+
Sbjct: 62  RAAYDQ 67

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 77.8 bits (191), Expect = 1e-18
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 7/70 (10%)

Query: 83  DPYELLGVPENASQD--EIKKAFHMLAKQYHPDANKNNPSAKR-----KFQEIRDAYETL 135
           D + L G+P     D   +   F  L +QYHPD   +   A++     +   I  A++TL
Sbjct: 2   DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61

Query: 136 RDSEKRAQYD 145
           R    RA+Y 
Sbjct: 62  RHPLMRAEYL 71

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 77.3 bits (190), Expect = 3e-18
 Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 80  SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAK---RKFQEIRDAYETLR 136
           +    ++ +G+ +  + +++KK +       HPD     P  +     F E+ DA+    
Sbjct: 31  AGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFE 90

Query: 137 DSEKRAQY 144
           +  ++  Y
Sbjct: 91  NQGQKPLY 98

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.9 bits (186), Expect = 8e-18
 Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 4/82 (4%)

Query: 72  HATGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSA-KRKFQEIRD 130
           H      S  ++   ++       + E KK    L  ++HPD N  N       F+ +++
Sbjct: 6   HHLVPRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQN 65

Query: 131 AYETLRDSEKRAQYDRRRSRGS 152
               L   EK+A  D+   R S
Sbjct: 66  EINRL---EKQAFLDQNADRAS 84

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.4 bits (182), Expect = 2e-17
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 1/75 (1%)

Query: 81  KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEK 140
            +D Y+ LG+   AS +EIK+A+   A +YHPD N   P A+ KF+EI +AY+ L D  K
Sbjct: 2   GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKN-KEPGAEEKFKEIAEAYDVLSDPRK 60

Query: 141 RAQYDRRRSRGSENE 155
           R  +DR    G +  
Sbjct: 61  REIFDRYGEEGLKGS 75

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

 Score = 74.3 bits (182), Expect = 2e-17
 Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 6/73 (8%)

Query: 79  SSKRDPYELLGVPENASQD--EIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLR 136
           + K    ELL +P     D   +++A+   +   HPD   ++       QE+   + T +
Sbjct: 8   ADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHA----LMQELNSLWGTFK 63

Query: 137 DSEKRAQYDRRRS 149
                 + +   +
Sbjct: 64  TEVYNLRMNLGGT 76

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]} Length = 79

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

 Score = 66.7 bits (162), Expect = 1e-14
 Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 4/76 (5%)

Query: 219 GCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPP----FTSTCSTCKGLG 274
           G TK +       CD CHG G     + + C TC G G+V +         TC  C+G G
Sbjct: 1   GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRG 60

Query: 275 RIIKDHCMTCKGSGVV 290
            +IKD C  C G G V
Sbjct: 61  TLIKDPCNKCHGHGRV 76

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 66.5 bits (162), Expect = 1e-14
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 8/81 (9%)

Query: 340 FSRDGADVYVDSNISFTQAILGGKVDVPTLSG---KVQVKIPKGVQPGQLLVLRGKGL-- 394
           F RDG D+  ++ I    AI GG+  +  +SG   KV +   + + PG   V+ GKG+  
Sbjct: 2   FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI 61

Query: 395 AKNGLFLDHGDQYVRFRVNFP 415
            K G    +G+  ++F +  P
Sbjct: 62  PKYG---GYGNLIIKFTIKDP 79

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

 Score = 65.6 bits (159), Expect = 8e-14
 Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 6/89 (6%)

Query: 81  KRDPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138
                +LLG+  +A  +   ++KA+    K++HPD   +      K +++   Y+ + D 
Sbjct: 7   SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEE----KMKKMNTLYKKMEDG 62

Query: 139 EKRAQYDRRRSRGSENEKYSAGDAEGFRY 167
            K A            E  + G  E  ++
Sbjct: 63  VKYAHQPDFGGFWDATEIPTYGTDEWEQW 91

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 90

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.3 bits (151), Expect = 5e-13
 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 340 FSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQ-VKIPKGVQPGQLLVLRGKGLAKNG 398
           F RDG D+     +SF +++LG    + T+ G+   +   + VQP Q     G+G+    
Sbjct: 2   FKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPK 61

Query: 399 LFLDHGDQYVRFRVNFPT 416
                G+  V+++V++P 
Sbjct: 62  NPSQRGNLIVKYKVDYPI 79

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.5 bits (136), Expect = 4e-11
 Identities = 9/70 (12%), Positives = 21/70 (30%), Gaps = 3/70 (4%)

Query: 269 TCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNL 328
              G  +  K       G+       ++ + +  G  +G  I     G+   +  +   L
Sbjct: 14  LFVGKKKSFKIGRKGPHGAS---EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTL 70

Query: 329 FIKLKVADDP 338
              ++    P
Sbjct: 71  QFVIQEKSHP 80

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.7 bits (131), Expect = 2e-10
 Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 11/71 (15%)

Query: 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRII--KD 279
           + C  C GRG       K C++C G G   +          F + C  C G G II  KD
Sbjct: 3   ILCKECEGRGG-KKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPKD 61

Query: 280 HCMTCKGSGVV 290
            C +C G  V 
Sbjct: 62  RCKSCNGKKVE 72

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]} Length = 90

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

 Score = 51.3 bits (122), Expect = 4e-09
 Identities = 14/74 (18%), Positives = 20/74 (27%), Gaps = 11/74 (14%)

Query: 228 AFVPCDSCHGRGFPADAKT---KICSTCRGIGRVTIPPFT--------STCSTCKGLGRI 276
               C+SCH  G P+         C +C G                  + C     +   
Sbjct: 10  ESGGCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVG 69

Query: 277 IKDHCMTCKGSGVV 290
            K  C +C   G  
Sbjct: 70  QKPTCESCHDDGRT 83

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.9 bits (108), Expect = 2e-07
 Identities = 12/71 (16%), Positives = 27/71 (38%), Gaps = 2/71 (2%)

Query: 342 RDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFL 401
           + G D+  + + S  +   G    +      ++V +  G++ GQ +V +G+        +
Sbjct: 2   QRGKDIKHEISASLEELYKGRTAKLALNRKILEVHVEPGMKDGQRIVFKGEADQ--APDV 59

Query: 402 DHGDQYVRFRV 412
             GD       
Sbjct: 60  IPGDVVFIVSE 70

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	416
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	99.89
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	99.85
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.85
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	99.83
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	99.81
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	99.78
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	99.73
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	99.7
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.68
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	99.66
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	99.64
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	99.62
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	99.47
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	99.46
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	99.07
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	98.93
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	98.71
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	98.65
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	97.6
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	96.94
d1m1qa_	90	Flavocytochrome c3 (respiratory fumarate reductase	95.5

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=6.5e-24  Score=160.47  Aligned_cols=72  Identities=49%  Similarity=0.797  Sum_probs=67.7

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS  152 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~  152 (416)
                      .+|||+||||+++||.+|||+|||+|++++|||+++++++++++|++|++||+||+||.+|+.||++|..+.
T Consensus         2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~   73 (75)
T d1xbla_           2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAF   73 (75)
T ss_dssp             CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHTTSSC
T ss_pred             CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhCcccc
Confidence            479999999999999999999999999999999998888899999999999999999999999999976553

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=3e-22  Score=152.10  Aligned_cols=72  Identities=44%  Similarity=0.758  Sum_probs=66.7

Q ss_pred             CcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 014884           80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS  152 (416)
Q Consensus        80 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~  152 (416)
                      +.+|||+||||+++||.+||++||+++++++|||++. ++++.++|+.|++||+||+||.+|+.||++|..|.
T Consensus         1 m~kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~-~~~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g~~~~   72 (77)
T d1hdja_           1 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGL   72 (77)
T ss_dssp             CCCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCC-CTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGC
T ss_pred             CCCChHHHcCCCCCcCHHHHHHHHHHHHHHhcccccc-chhHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhh
Confidence            3579999999999999999999999999999999987 46788999999999999999999999999977654

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.85  E-value=4.1e-22  Score=156.06  Aligned_cols=78  Identities=27%  Similarity=0.511  Sum_probs=73.1

Q ss_pred             CcCCCCCceEEEEecCHHHHhcCCeeEEecCCCe-EEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884          339 IFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT  416 (416)
Q Consensus       339 ~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~-~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~  416 (416)
                      .|+|+|+||+++++|++.||++|++++|+|+||+ +.|++|+++++|++++|+|+|||..+.++.+|||||+|+|.+|+
T Consensus         1 ~F~R~G~DL~~~~~I~~~eal~G~~~~i~~~dG~~i~i~ip~~~~~g~~~~i~g~G~p~~~~~~~rGdL~V~~~v~~P~   79 (90)
T d1c3ga2           1 NFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPI   79 (90)
T ss_dssp             SEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCS
T ss_pred             CCeEeCCeEEEEEEeCHHHHhcCCeEEEecccccceecccccccccccccccCCCCCCcCCCCCCcCCEEEEEEEEcCC
Confidence            4899999999999999999999999999999995 79999999999999999999999875556789999999999995

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.83  E-value=3.4e-21  Score=147.46  Aligned_cols=77  Identities=31%  Similarity=0.580  Sum_probs=70.9

Q ss_pred             CcCCCCCceEEEEecCHHHHhcCCeeEEecCCCe-EEEEeCCC--CCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcC
Q 014884          339 IFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG--VQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP  415 (416)
Q Consensus       339 ~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~-~~v~ip~g--~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P  415 (416)
                      .|+|+|+||+++++|++.||++|++++|+|+||. ++++||++  +++|++++|+|+|||..+. +.+|||||+|+|++|
T Consensus         1 tF~R~G~dL~~~~~I~~~eal~G~~~~i~~~dg~~~~i~i~~~~~~~~g~~~~i~g~G~p~~~~-~~~GDL~v~~~V~~P   79 (80)
T d1nlta2           1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKY-GGYGNLIIKFTIKDP   79 (80)
T ss_dssp             SCEEETTEEEEEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSS-CSBCCEEEEEEEECC
T ss_pred             CcEEeCCEEEEEEEeCHHHHhCCCEEEEEecCcceEEEEeCCCCCcCCCCEEEecCCCCCCCCc-CCcCcEEEEEEEEcC
Confidence            4899999999999999999999999999999996 67888876  8999999999999998854 468999999999999


Q ss_pred             C
Q 014884          416 T  416 (416)
Q Consensus       416 ~  416 (416)
                      +
T Consensus        80 k   80 (80)
T d1nlta2          80 E   80 (80)
T ss_dssp             C
T ss_pred             C
Confidence            6

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=7.3e-21  Score=149.74  Aligned_cols=70  Identities=31%  Similarity=0.595  Sum_probs=63.8

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------hhHHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN------PSAKRKFQEIRDAYETLRDSEKRAQYDRRR  148 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~  148 (416)
                      .+..|||+||||+++|+.+|||+||++|+++||||+++..      ++++++|+.|++||+||+||.+|+.||...
T Consensus        13 ~~~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~~YD~~~   88 (94)
T d1wjza_          13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR   88 (94)
T ss_dssp             SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred             hhccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHcc
Confidence            3457999999999999999999999999999999998754      347889999999999999999999999873

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=99.78  E-value=1.7e-20  Score=153.35  Aligned_cols=66  Identities=23%  Similarity=0.385  Sum_probs=60.1

Q ss_pred             cCCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccC
Q 014884           81 KRDPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSR  150 (416)
Q Consensus        81 ~~~~y~iLgv~~~a--~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~  150 (416)
                      ..+||+||||+++|  +.++||+|||+||+++|||++++    .++|++|++||+||+||.+|+.||..+..
T Consensus         7 ~~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~----~e~F~~I~~AY~vLsd~~kR~~YD~~~~~   74 (114)
T d1gh6a_           7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGGF   74 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSCC
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhh----HHHHHHHHHHHHHhCCHHHHHHHhccCCC
Confidence            36899999999999  78899999999999999999985    36899999999999999999999987543

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=99.73  E-value=1.1e-18  Score=131.93  Aligned_cols=64  Identities=19%  Similarity=0.309  Sum_probs=59.0

Q ss_pred             cCCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 014884           81 KRDPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR  148 (416)
Q Consensus        81 ~~~~y~iLgv~~~a--~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~  148 (416)
                      ..+||+||||++++  +.++||+|||++++++|||++++    +++|++||+||++|+|+.+|..||..+
T Consensus        10 ~~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g~----~e~~~~in~Ay~~L~d~~~r~~~~~~~   75 (79)
T d1fafa_          10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRMNLGG   75 (79)
T ss_dssp             HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTTCCSS
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCCC----HHHHHHHHHHHHHHCCHHHHHHHccCC
Confidence            46899999999987  99999999999999999999864    478999999999999999999999863

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=3.9e-18  Score=128.85  Aligned_cols=66  Identities=30%  Similarity=0.501  Sum_probs=58.1

Q ss_pred             CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCh-----hHHHHHHHHHHHHHHhhhhhhhhhhccc
Q 014884           82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNP-----SAKRKFQEIRDAYETLRDSEKRAQYDRR  147 (416)
Q Consensus        82 ~~~y~iLgv~~~--a~~~eik~ayr~la~~~HPD~~~~~~-----~a~~~f~~i~~Ay~~L~d~~~r~~yd~~  147 (416)
                      .|||++|||+++  ++.+|||+||+++++++|||+..+.+     .+++.|+.|++||+||+||.+|+.|+..
T Consensus         1 lnyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~~Yll~   73 (76)
T d1fpoa1           1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLS   73 (76)
T ss_dssp             CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred             CChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            389999999985  45899999999999999999976543     2678899999999999999999999864

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.68  E-value=5.1e-17  Score=123.84  Aligned_cols=80  Identities=18%  Similarity=0.279  Sum_probs=68.2

Q ss_pred             CCeEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeee
Q 014884          203 PDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCM  282 (416)
Q Consensus       203 ~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~  282 (416)
                      ++++++|.|||||+|+|+++.+++.+..    |+                 |.+                          
T Consensus         1 e~v~~~l~vtLee~~~G~~k~i~~~r~~----~~-----------------g~~--------------------------   33 (80)
T d1c3ga1           1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG----PH-----------------GAS--------------------------   33 (80)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEE----TT-----------------TEE--------------------------
T ss_pred             CCEEEEeEEEHHHHhCCCceEeecceec----cc-----------------CCC--------------------------
Confidence            4789999999999999999999886532    22                 211                          


Q ss_pred             EeeCCcEEeceEEEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCC
Q 014884          283 TCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDP  338 (416)
Q Consensus       283 ~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~  338 (416)
                               +.++++|.||||+++|++|+|+|+|++.+.++.+|||+|+|+++|||
T Consensus        34 ---------~~~~~~v~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~~~i~~~~HP   80 (80)
T d1c3ga1          34 ---------EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHP   80 (80)
T ss_dssp             ---------EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCS
T ss_pred             ---------ceEEEEEEECCCCCCCcEEEECCccccCcCCCCCCCEEEEEEeCCCC
Confidence                     24689999999999999999999999987777899999999999998

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.8e-17  Score=126.76  Aligned_cols=68  Identities=22%  Similarity=0.318  Sum_probs=59.4

Q ss_pred             CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 014884           79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYDRRRS  149 (416)
Q Consensus        79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~  149 (416)
                      ..-.++|+||+|+.+||.+|||+|||+|+++||||++++++ .|+++|+.|++||++|++   +..||+...
T Consensus        13 ~~~~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~~---~~~~d~~~~   81 (88)
T d1iura_          13 SILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEK---QAFLDQNAD   81 (88)
T ss_dssp             SCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHH---HTTCSSSSS
T ss_pred             hHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHH---HHHhhccch
Confidence            33479999999999999999999999999999999998765 488999999999999974   667776543

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.64  E-value=3.3e-17  Score=129.28  Aligned_cols=64  Identities=22%  Similarity=0.473  Sum_probs=58.6

Q ss_pred             cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---hHHHHHHHHHHHHHHhhhhhhhhhh
Q 014884           81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP---SAKRKFQEIRDAYETLRDSEKRAQY  144 (416)
Q Consensus        81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~---~a~~~f~~i~~Ay~~L~d~~~r~~y  144 (416)
                      ..++|++||+...+|.++||+|||++++++|||++++.+   .|++.|+.|++||++|+||.+|+.|
T Consensus        32 ~~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~~R~~Y   98 (98)
T d1nz6a_          32 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY   98 (98)
T ss_dssp             TCCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred             cccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCHHHHhcC
Confidence            457899999999999999999999999999999987553   3788999999999999999999988

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.62  E-value=6.2e-16  Score=115.81  Aligned_cols=73  Identities=19%  Similarity=0.282  Sum_probs=65.5

Q ss_pred             ccCCCeEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeee
Q 014884          200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD  279 (416)
Q Consensus       200 ~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~  279 (416)
                      ++++|++++|.|||+|||.|+++.+.+.                                                    
T Consensus         2 rkg~di~~~l~isleea~~G~~~~~~~~----------------------------------------------------   29 (74)
T d1nlta1           2 QRGKDIKHEISASLEELYKGRTAKLALN----------------------------------------------------   29 (74)
T ss_dssp             CBCCCEEEEEEECTTHHHHCEEEEEEEE----------------------------------------------------
T ss_pred             CCCCCEEEEEEecHHHHHhhcccceeec----------------------------------------------------
Confidence            5789999999999999999999887652                                                    


Q ss_pred             eeeEeeCCcEEeceEEEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCC
Q 014884          280 HCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDP  338 (416)
Q Consensus       280 ~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~  338 (416)
                                   .+.++|.||||+++|++|+|+|+|++.+ ++.+|||+|+|+++||.
T Consensus        30 -------------~~~~~i~Ip~G~~~G~~ir~~g~G~~~~-~~~~GDl~v~i~~~pHk   74 (74)
T d1nlta1          30 -------------RKILEVHVEPGMKDGQRIVFKGEADQAP-DVIPGDVVFIVSERPHK   74 (74)
T ss_dssp             -------------EEEEEEEECTTCCTTCEEEETTCSCCCT-TCBCCCEEEEEEECCCS
T ss_pred             -------------CccEEEEecccccCCeEEEecCCcCCCC-CCCCCCEEEEEEecCCC
Confidence                         2478999999999999999999999975 67899999999999994

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=99.47  E-value=6e-15  Score=111.70  Aligned_cols=74  Identities=38%  Similarity=0.885  Sum_probs=66.8

Q ss_pred             CcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEec
Q 014884          219 GCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDG  292 (416)
Q Consensus       219 G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~  292 (416)
                      |++++|.|++.+.|+.|+|+|+.......+|+.|+|+|++.+.    .++++|+.|+|+|++++++|..|+|.|++.+
T Consensus         1 G~~k~i~i~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~v~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~k   78 (79)
T d1exka_           1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVER   78 (79)
T ss_dssp             CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECSSBCGGGTTSSEEEC
T ss_pred             CceEEEEeeeeccCCCCcCcccCCCccceeCCCccceeEEEEecccceeeEECcccCcceeECCCCCCCCCCceEeec
Confidence            6789999999999999999999888888999999999987654    2367899999999999999999999998875

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.46  E-value=5e-14  Score=105.21  Aligned_cols=70  Identities=17%  Similarity=0.266  Sum_probs=64.1

Q ss_pred             CCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEE
Q 014884          342 RDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVN  413 (416)
Q Consensus       342 r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~  413 (416)
                      |+|.|++++++|||.||++|+++.|.+..+.+.|+||+|+++|++++++|+|.+..+.  .+|||+|++++.
T Consensus         2 rkg~di~~~l~isleea~~G~~~~~~~~~~~~~i~Ip~G~~~G~~ir~~g~G~~~~~~--~~GDl~v~i~~~   71 (74)
T d1nlta1           2 QRGKDIKHEISASLEELYKGRTAKLALNRKILEVHVEPGMKDGQRIVFKGEADQAPDV--IPGDVVFIVSER   71 (74)
T ss_dssp             CBCCCEEEEEEECTTHHHHCEEEEEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTC--BCCCEEEEEEEC
T ss_pred             CCCCCEEEEEEecHHHHHhhcccceeecCccEEEEecccccCCeEEEecCCcCCCCCC--CCCCEEEEEEec
Confidence            6899999999999999999999999987777999999999999999999999987653  469999999874

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.07  E-value=1.5e-11  Score=91.37  Aligned_cols=64  Identities=38%  Similarity=0.853  Sum_probs=52.7

Q ss_pred             eeeecCCCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEe--eeeeeEeeCCcEEec
Q 014884          228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRII--KDHCMTCKGSGVVDG  292 (416)
Q Consensus       228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~--~~~C~~C~g~G~~~~  292 (416)
                      |.++|+.|+|+|+.... ..+|+.|+|+|+++..        .+..+|+.|+|+|+++  +++|..|+|.|++++
T Consensus         1 r~v~C~~C~G~G~~~~~-~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~E   74 (74)
T d1nlta3           1 KQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENE   74 (74)
T ss_dssp             EEEECTTTTTCSBSTTT-CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCTTSBCSSSTTSCEEEE
T ss_pred             CccCCcCCcccccCCCC-CCCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEeCCCCCCCCCCCeeEeCC
Confidence            56899999999987654 5789999999986532        2367899999999987  468999999998763

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.93  E-value=1.1e-09  Score=82.37  Aligned_cols=68  Identities=13%  Similarity=0.212  Sum_probs=56.5

Q ss_pred             CceEEEEecCHHHHhcCCeeEEec----CCC-----eEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEE
Q 014884          345 ADVYVDSNISFTQAILGGKVDVPT----LSG-----KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVN  413 (416)
Q Consensus       345 ~DL~~~~~I~l~~Al~G~~~~i~~----ldg-----~~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~  413 (416)
                      +||.+.+.|||.||+.|+++.|..    .+|     .+.|.||+|+.+|++++++|+|....+. +..|||+|.+++.
T Consensus         1 e~v~~~l~vtLee~~~G~~k~i~~~r~~~~g~~~~~~~~v~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDl~~~i~~~   77 (80)
T d1c3ga1           1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQT-GRRKTLQFVIQEK   77 (80)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSSS-SCBCEEEEEEEEC
T ss_pred             CCEEEEeEEEHHHHhCCCceEeecceecccCCCceEEEEEEECCCCCCCcEEEECCccccCcCC-CCCCCEEEEEEeC
Confidence            478999999999999999877753    444     3689999999999999999999876532 2469999999875

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.71  E-value=7.1e-09  Score=77.81  Aligned_cols=72  Identities=21%  Similarity=0.187  Sum_probs=59.9

Q ss_pred             ccCCCeEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeee
Q 014884          200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD  279 (416)
Q Consensus       200 ~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~  279 (416)
                      +.|.|+.+++.|+|.||+.|+++.+..-                                                    
T Consensus         4 R~G~dL~~~~~I~~~eal~G~~~~i~~~----------------------------------------------------   31 (80)
T d1nlta2           4 RDGDDLVYEAEIDLLTAIAGGEFALEHV----------------------------------------------------   31 (80)
T ss_dssp             EETTEEEEEEEEEHHHHHHCBCCEEECS----------------------------------------------------
T ss_pred             EeCCEEEEEEEeCHHHHhCCCEEEEEec----------------------------------------------------
Confidence            4589999999999999999998776521                                                    


Q ss_pred             eeeEeeCCcEEeceEEEEEEeccc--ccCCCEEEEcCccCCCCCCCCCccEEEEEEEE
Q 014884          280 HCMTCKGSGVVDGVKEVKVTIPAG--VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVA  335 (416)
Q Consensus       280 ~C~~C~g~G~~~~~~~l~V~Ip~G--~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~  335 (416)
                                  ....++|.||++  +++|++++++|+|.+...+...|||+|+++|+
T Consensus        32 ------------dg~~~~i~i~~~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~V~   77 (80)
T d1nlta2          32 ------------SGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIK   77 (80)
T ss_dssp             ------------SSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEE
T ss_pred             ------------CcceEEEEeCCCCCcCCCCEEEecCCCCCCCCcCCcCcEEEEEEEE
Confidence                        012567777777  99999999999999877666789999999997

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.65  E-value=1.1e-08  Score=78.53  Aligned_cols=73  Identities=26%  Similarity=0.301  Sum_probs=60.5

Q ss_pred             ccCCCeEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeee
Q 014884          200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD  279 (416)
Q Consensus       200 ~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~  279 (416)
                      ++|.|+.+++.|+|.||+.|+++.+..-                                                    
T Consensus         4 R~G~DL~~~~~I~~~eal~G~~~~i~~~----------------------------------------------------   31 (90)
T d1c3ga2           4 RDGDDLIYTLPLSFKESLLGFSKTIQTI----------------------------------------------------   31 (90)
T ss_dssp             EETTEEEEEECCBHHHHHHCEEEEEECS----------------------------------------------------
T ss_pred             EeCCeEEEEEEeCHHHHhcCCeEEEecc----------------------------------------------------
Confidence            4689999999999999999998776520                                                    


Q ss_pred             eeeEeeCCcEEeceEEEEEEecccccCCCEEEEcCccCCCCC-CCCCccEEEEEEEEe
Q 014884          280 HCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGR-GRQHGNLFIKLKVAD  336 (416)
Q Consensus       280 ~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-g~~~GDl~v~i~v~~  336 (416)
                                  ..+.++|+||+|+++|++++++|+|.+... .+..|||+|+++|.-
T Consensus        32 ------------dG~~i~i~ip~~~~~g~~~~i~g~G~p~~~~~~~rGdL~V~~~v~~   77 (90)
T d1c3ga2          32 ------------DGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDY   77 (90)
T ss_dssp             ------------SSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBC
T ss_pred             ------------cccceecccccccccccccccCCCCCCcCCCCCCcCCEEEEEEEEc
Confidence                        113688999999999999999999997543 345799999999984

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=97.60  E-value=1.1e-05  Score=59.67  Aligned_cols=47  Identities=32%  Similarity=0.807  Sum_probs=37.4

Q ss_pred             eeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEee
Q 014884          228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK  278 (416)
Q Consensus       228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~  278 (416)
                      ....|+.|+|+|....     ....+|+.|+|+|.+    +..+|..|+|.|++.+
T Consensus        27 ~~~~C~~C~G~G~v~~~~g~~~~~~~C~~C~G~G~~----i~~~C~~C~G~G~v~k   78 (79)
T d1exka_          27 QPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTL----IKDPCNKCHGHGRVER   78 (79)
T ss_dssp             CCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEE----CSSBCGGGTTSSEEEC
T ss_pred             cceeCCCccceeEEEEecccceeeEECcccCcceeE----CCCCCCCCCCceEeec
Confidence            3467999999996421     124589999999998    4678999999999864

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.94  E-value=0.00011  Score=53.23  Aligned_cols=46  Identities=26%  Similarity=0.593  Sum_probs=34.5

Q ss_pred             eecCCCCCCCCCCCC---------cccccCCCcceeEEEeCCCcccCCCCCCceEEe
Q 014884          230 VPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRII  277 (416)
Q Consensus       230 ~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~  277 (416)
                      ..|+.|+|+|.....         ....|+.|+|.|.+..  ...+|..|+|.|.+.
T Consensus        19 ~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~--~~~~C~~C~G~g~v~   73 (74)
T d1nlta3          19 KKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIID--PKDRCKSCNGKKVEN   73 (74)
T ss_dssp             CCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCC--TTSBCSSSTTSCEEE
T ss_pred             CCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEeC--CCCCCCCCCCeeEeC
Confidence            469999999975321         2458999999997632  245899999999764

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]}

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

Probab=95.50  E-value=0.00023  Score=53.40  Aligned_cols=60  Identities=23%  Similarity=0.522  Sum_probs=46.0

Q ss_pred             ecCCCCCCCCCCCCc---ccccCCCcceeEEEeCC--------CcccCCCCCCceEEeeeeeeEeeCCcEE
Q 014884          231 PCDSCHGRGFPADAK---TKICSTCRGIGRVTIPP--------FTSTCSTCKGLGRIIKDHCMTCKGSGVV  290 (416)
Q Consensus       231 ~C~~C~G~G~~~~~~---~~~C~~C~G~G~~~~~~--------~~~~C~~C~G~G~~~~~~C~~C~g~G~~  290 (416)
                      .|..|+|.|......   ...|..|+|.|......        .-..|..|+|.|..+.+.|..|++.|..
T Consensus        13 ~C~~CH~~~~~~~~~~~~~~~C~~CHg~~~~~~~~~~~h~~~~~c~~CH~~H~~~~~~~~~C~~CH~~gr~   83 (90)
T d1m1qa_          13 GCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQKPTCESCHDDGRT   83 (90)
T ss_dssp             CGGGTSGGGCCCSSSHHHHHHHHHHHCCGGGSCTTTGGGTTTCCGGGTCCTTTSBTTCCCCSTTTCSSCCC
T ss_pred             CCCCcCCCCccccCCCCCCCcCcccCCCceeEeeccccccCccccccCccccCCCCcCCCccccccCCCcc
Confidence            699999998754332   46899999998753321        2467888899998889999999998754