Citrus Sinensis ID: 014931


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-----
MAAKRQLIVPAATWAIRSIFQSLVALLIALLFFAAVYVTQNNVQLVEDRLITSKRSRDLLLSSPPRCNLFSGKWVFDNKSYPLYKEKECTFMSDQLACEKFGRKDLNYQFWRWQPHHCDLPRFNGTKLLEKLRNKRLVFVGDSLNRGQWVSMVCLVDSLIPPKLKSMHYKQNGSLIIFKATEYNATIEFYWTPLLVESNSDDPVNHRLPDRIVRVQAIEKHARYWTDADILVFNSYLWWKRSQMEVLWGSFGSPDGIHKDVLMPRVYEMALRTWSEWLEVNINRNKTQLFFVSMSPTHQRSEEWGGAKNGNCYGETEQIVQEGYWGRDTDLKMMGIVESVLAELITRGLNVQIINITQLSEYRKEGHPSIYRKQWEALTEDQISNPSSYADCIHWCLPGVPDVWNELVYAYILQH
ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccHHHHcccccccccccEEEccccccccccHHHHHHHHccccEEEEEccccccHHHHHHHHHHHcccccccccEEEEcccEEEEEEEccccEEEEEEccccccccccccccccccccEEEccHHHHHHHccccccEEEEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcc
ccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccHHccccccHccEEEEcccccccccccHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHcccccccEEEEEcccEEEEEEEEccEEEEEEEccEEEEEccccccccccccEEEEHHHHHHHHHHcccccEEEEEcEEEEcccccEEccccccccccEcccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHcccccccccccccccHHHccccccccccccccccccccHHHHHHHHHHHcc
MAAKRQLIVPAATWAIRSIFQSLVALLIALLFFAAVYVTQNNVQLVEDRLITskrsrdlllsspprcnlfsgkwvfdnksyplykekectfmsDQLACEKFgrkdlnyqfwrwqphhcdlprfngTKLLEKLRNKRLVFVgdslnrgqWVSMVCLVdslippklksmhykqngSLIIFKATEYNATIEFywtpllvesnsddpvnhrlpdrIVRVQAIEKHARYWTDADILVFNSYLWWKRSQMEVlwgsfgspdgihkdvlMPRVYEMALRTWSEWLEVNINRNKTQLFFvsmspthqrseewggakngncygeteqivqegywgrdtdlKMMGIVESVLAELITRGLNVQIINITQLseyrkeghpsiYRKQWEALtedqisnpssyadcihwclpgvpdvWNELVYAYILQH
maakrqlivpaATWAIRSIFQSLVALLIALLFFAAVYVTQNNVQLVEDRLITSkrsrdlllsspprcnlfsgkwVFDNKSYPLYKEKECTFMSDQLACEKFGRKDLNYQFWRWQPHHCDLPRFNGTKLLEKLRNKRLVFVgdslnrgqWVSMVCLVDSLIPPKLKSMHYKQNGSLIIFKATEYNATIEFYWTPLLVESNSDDPVNHRLPDRIVRVQAIEKharywtdadILVFNSYLWWKRSQMEVLWGSFGSPDGIHKDVLMPRVYEMALRTWSEWLEVNINRNKTQLFFVSMSPTHQrseewggakngncYGETEQIVQEGYWGRDTDLKMMGIVESVLAELITRGLNVQIINITqlseyrkeghPSIYRKQWEALTEDQISNPSSYADCIHWCLPGVPDVWNELVYAYILQH
MAAKRQLIVPAATWAIRSIFQSlvalliallffaavYVTQNNVQLVEDRLITSKRSRDLLLSSPPRCNLFSGKWVFDNKSYPLYKEKECTFMSDQLACEKFGRKDLNYQFWRWQPHHCDLPRFNGTKLLEKLRNKRLVFVGDSLNRGQWVSMVCLVDSLIPPKLKSMHYKQNGSLIIFKATEYNATIEFYWTPLLVESNSDDPVNHRLPDRIVRVQAIEKHARYWTDADILVFNSYLWWKRSQMEVLWGSFGSPDGIHKDVLMPRVYEMALRTWSEWLEVNINRNKTQLFFVSMSPTHQRSEEWGGAKNGNCYGETEQIVQEGYWGRDTDLKMMGIVESVLAELITRGLNVQIINITQLSEYRKEGHPSIYRKQWEALTEDQISNPSSYADCIHWCLPGVPDVWNELVYAYILQH
******LIVPAATWAIRSIFQSLVALLIALLFFAAVYVTQNNVQLVEDRLITSKRSRDLLLSSPPRCNLFSGKWVFDNKSYPLYKEKECTFMSDQLACEKFGRKDLNYQFWRWQPHHCDLPRFNGTKLLEKLRNKRLVFVGDSLNRGQWVSMVCLVDSLIPPKLKSMHYKQNGSLIIFKATEYNATIEFYWTPLLVESNSDDPVNHRLPDRIVRVQAIEKHARYWTDADILVFNSYLWWKRSQMEVLWGSFGSPDGIHKDVLMPRVYEMALRTWSEWLEVNINRNKTQLFFVSMS*******EWGGAKNGNCYGETEQIVQEGYWGRDTDLKMMGIVESVLAELITRGLNVQIINITQLSEYRKEGHPSIYRKQWEALTEDQISNPSSYADCIHWCLPGVPDVWNELVYAYIL**
**********AATWAIRSIFQSLVALLIALLFFAAVYV*****************************NLFSGKWVFDNKSYPLYKEKECTFMSDQLACEKFGRKDLNYQFWRWQPHHCDLPRFNGTKLLEKLRNKRLVFVGDSLNRGQWVSMVCLVDSLIPPKLKSMHYKQNGSLIIFKATEYNATIEFYWTPLLVESNSDDPVNHRLPDRIVRVQAIEKHARYWTDADILVFNSYLWWKRSQMEVLWGSFGSPDGIHKDVLMPRVYEMALRTWSEWLEVNINRNKTQLFFVSMSPTHQRSEEWGGAKNGNCYGETEQIVQEGYWGRDTDLKMMGIVESVLAELITRGLNVQIINITQLSEYRKEGHPSIYRKQ*************SYADCIHWCLPGVPDVWNELVYAYILQ*
MAAKRQLIVPAATWAIRSIFQSLVALLIALLFFAAVYVTQNNVQLVEDRLITSKRSRDLLLSSPPRCNLFSGKWVFDNKSYPLYKEKECTFMSDQLACEKFGRKDLNYQFWRWQPHHCDLPRFNGTKLLEKLRNKRLVFVGDSLNRGQWVSMVCLVDSLIPPKLKSMHYKQNGSLIIFKATEYNATIEFYWTPLLVESNSDDPVNHRLPDRIVRVQAIEKHARYWTDADILVFNSYLWWKRSQMEVLWGSFGSPDGIHKDVLMPRVYEMALRTWSEWLEVNINRNKTQLFFVSM**********GGAKNGNCYGETEQIVQEGYWGRDTDLKMMGIVESVLAELITRGLNVQIINITQLSEYRKEGHPSIYRKQWEALTEDQISNPSSYADCIHWCLPGVPDVWNELVYAYILQH
****RQLIVPAATWAIRSIFQSLVALLIALLFFAAVYVTQNN***********************RCNLFSGKWVFDNKSYPLYKEKECTFMSDQLACEKFGRKDLNYQFWRWQPHHCDLPRFNGTKLLEKLRNKRLVFVGDSLNRGQWVSMVCLVDSLIPPKLKSMHYKQNGSLIIFKATEYNATIEFYWTPLLVESNSDDPVNHRLPDRIVRVQAIEKHARYWTDADILVFNSYLWWKRSQMEVLWGSFGSPDGIHKDVLMPRVYEMALRTWSEWLEVNINRNKTQLFFVSMSPTHQRSEEWGGAKNGNCYGETEQIVQEGYWGRDTDLKMMGIVESVLAELITRGLNVQIINITQLSEYRKEGHPSIYRKQWEALTEDQISNPSSYADCIHWCLPGVPDVWNELVYAYILQH
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooo
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAAKRQLIVPAATWAIRSIFQSLVALLIALLFFAAVYVTQNNVQLVEDRLITSKRSRDLLLSSPPRCNLFSGKWVFDNKSYPLYKEKECTFMSDQLACEKFGRKDLNYQFWRWQPHHCDLPRFNGTKLLEKLRNKRLVFVGDSLNRGQWVSMVCLVDSLIPPKLKSMHYKQNGSLIIFKATEYNATIEFYWTPLLVESNSDDPVNHRLPDRIVRVQAIEKHARYWTDADILVFNSYLWWKRSQMEVLWGSFGSPDGIHKDVLMPRVYEMALRTWSEWLEVNINRNKTQLFFVSMSPTHQRSEEWGGAKNGNCYGETEQIVQEGYWGRDTDLKMMGIVESVLAELITRGLNVQIINITQLSEYRKEGHPSIYRKQWEALTEDQISNPSSYADCIHWCLPGVPDVWNELVYAYILQH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query415
297735617431 unnamed protein product [Vitis vinifera] 0.983 0.946 0.730 0.0
225439532408 PREDICTED: uncharacterized protein LOC10 0.983 1.0 0.730 0.0
357468537408 hypothetical protein MTR_4g014440 [Medic 0.978 0.995 0.713 1e-175
224139260402 predicted protein [Populus trichocarpa] 0.963 0.995 0.751 1e-175
147771889387 hypothetical protein VITISV_026158 [Viti 0.932 1.0 0.744 1e-174
356506561411 PREDICTED: uncharacterized protein LOC10 0.968 0.978 0.713 1e-174
357506157412 hypothetical protein MTR_7g070060 [Medic 0.987 0.995 0.681 1e-173
363807192415 uncharacterized protein LOC100792755 [Gl 0.992 0.992 0.705 1e-172
356568144410 PREDICTED: uncharacterized protein LOC10 0.985 0.997 0.698 1e-171
357506159403 hypothetical protein MTR_7g070060 [Medic 0.966 0.995 0.667 1e-167
>gi|297735617|emb|CBI18111.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  640 bits (1652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/415 (73%), Positives = 347/415 (83%), Gaps = 7/415 (1%)

Query: 1   MAAKRQLIVPAATWAIRSIFQSLVALLIALLFFAAVYVTQNNVQLVEDRLITSKRSRDLL 60
           MA K  ++  A TW +R  F SL+ LL+A L  AAVY+T    + +EDR    +   +  
Sbjct: 24  MAQKLHMV--AGTWGVRCSFHSLMGLLVATLVVAAVYLTGEGGRWLEDRKSICQNCGE-- 79

Query: 61  LSSPPRCNLFSGKWVFDNKSYPLYKEKECTFMSDQLACEKFGRKDLNYQFWRWQPHHCDL 120
            SS   CNLFSGKWVFDN+S+PLYKEK+CTFMSDQLACEKFGR+DL+YQ WRWQPH CDL
Sbjct: 80  -SSCSGCNLFSGKWVFDNRSHPLYKEKQCTFMSDQLACEKFGRQDLSYQNWRWQPHQCDL 138

Query: 121 PRFNGTKLLEKLRNKRLVFVGDSLNRGQWVSMVCLVDSLIPPKLKSMHYKQNGSLIIFKA 180
           PRFN T LLE+LR KRLVFVGDSLNRGQWVSMVCLVDS IPP LKSMH   NGSL  FKA
Sbjct: 139 PRFNATALLERLRGKRLVFVGDSLNRGQWVSMVCLVDSSIPPNLKSMH--TNGSLTTFKA 196

Query: 181 TEYNATIEFYWTPLLVESNSDDPVNHRLPDRIVRVQAIEKHARYWTDADILVFNSYLWWK 240
           TEYNATIEFYW P+LVESNSDDPV HRLP+R+VRVQAIEKHAR+WTDADILVFN+YLWW+
Sbjct: 197 TEYNATIEFYWAPMLVESNSDDPVMHRLPERVVRVQAIEKHARHWTDADILVFNTYLWWR 256

Query: 241 RSQMEVLWGSFGSPDGIHKDVLMPRVYEMALRTWSEWLEVNINRNKTQLFFVSMSPTHQR 300
           RS+M+VLWGSF SPDGI+KDV M RVYEMAL+TWS+WLEV++NR+KTQLFFVSMSPTHQR
Sbjct: 257 RSKMKVLWGSFESPDGIYKDVEMVRVYEMALKTWSDWLEVHVNRSKTQLFFVSMSPTHQR 316

Query: 301 SEEWGGAKNGNCYGETEQIVQEGYWGRDTDLKMMGIVESVLAELITRGLNVQIINITQLS 360
           +EEWG A+  NCY ETE I QEGYWG  +  KMMG+V+  +  L  RG+NV+++NITQLS
Sbjct: 317 AEEWGAAEGQNCYSETELISQEGYWGNGSCRKMMGVVDDTIDRLKKRGVNVKVLNITQLS 376

Query: 361 EYRKEGHPSIYRKQWEALTEDQISNPSSYADCIHWCLPGVPDVWNELVYAYILQH 415
           EYRKEGHPSIYRKQWE LTEDQ+S+P SYADCIHWCLPGVPDVWNEL+YAYIL +
Sbjct: 377 EYRKEGHPSIYRKQWEPLTEDQLSDPKSYADCIHWCLPGVPDVWNELLYAYILHY 431




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439532|ref|XP_002264195.1| PREDICTED: uncharacterized protein LOC100261884 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357468537|ref|XP_003604553.1| hypothetical protein MTR_4g014440 [Medicago truncatula] gi|355505608|gb|AES86750.1| hypothetical protein MTR_4g014440 [Medicago truncatula] Back     alignment and taxonomy information
>gi|224139260|ref|XP_002323025.1| predicted protein [Populus trichocarpa] gi|222867655|gb|EEF04786.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147771889|emb|CAN60253.1| hypothetical protein VITISV_026158 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356506561|ref|XP_003522048.1| PREDICTED: uncharacterized protein LOC100789678 [Glycine max] Back     alignment and taxonomy information
>gi|357506157|ref|XP_003623367.1| hypothetical protein MTR_7g070060 [Medicago truncatula] gi|355498382|gb|AES79585.1| hypothetical protein MTR_7g070060 [Medicago truncatula] Back     alignment and taxonomy information
>gi|363807192|ref|NP_001242606.1| uncharacterized protein LOC100792755 [Glycine max] gi|255642447|gb|ACU21487.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356568144|ref|XP_003552273.1| PREDICTED: uncharacterized protein LOC100785941 [Glycine max] Back     alignment and taxonomy information
>gi|357506159|ref|XP_003623368.1| hypothetical protein MTR_7g070060 [Medicago truncatula] gi|355498383|gb|AES79586.1| hypothetical protein MTR_7g070060 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query415
TAIR|locus:2057145410 TBL34 "AT2G38320" [Arabidopsis 0.968 0.980 0.652 9e-148
TAIR|locus:2063125425 TBL33 "AT2G40320" [Arabidopsis 0.816 0.797 0.513 2.6e-102
TAIR|locus:2065069424 TBL28 "TRICHOME BIREFRINGENCE- 0.831 0.813 0.504 1.3e-98
TAIR|locus:2082078487 ESK1 "ESKIMO 1" [Arabidopsis t 0.826 0.704 0.487 4.2e-95
TAIR|locus:2179172434 TBL3 "TRICHOME BIREFRINGENCE-L 0.826 0.790 0.457 5.1e-90
TAIR|locus:2182157464 TBL11 "TRICHOME BIREFRINGENCE- 0.802 0.717 0.389 1.2e-65
TAIR|locus:2080389469 TBL10 "TRICHOME BIREFRINGENCE- 0.836 0.739 0.376 8.5e-65
TAIR|locus:2178813402 PMR5 "AT5G58600" [Arabidopsis 0.792 0.818 0.378 1.8e-64
TAIR|locus:2088659556 TBL1 "AT3G12060" [Arabidopsis 0.831 0.620 0.384 8.8e-63
TAIR|locus:2055878364 AT2G31110 "AT2G31110" [Arabido 0.710 0.810 0.356 1.1e-62
TAIR|locus:2057145 TBL34 "AT2G38320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1443 (513.0 bits), Expect = 9.0e-148, P = 9.0e-148
 Identities = 272/417 (65%), Positives = 326/417 (78%)

Query:     3 AKRQLIVPAATWAIRSIFQSXXXXXXXXXXXXXXYVTQNNV--QLVEDRLITSKRSRDLL 60
             AKRQL++      IR+ F +              ++++N++  +  +   +T  R  D  
Sbjct:     2 AKRQLLM----LGIRTSFHTIAAVLVAGLIFTAVFLSRNSLPKENPQSHGVTD-RGGD-- 54

Query:    61 LSSPPRCNLFSGKWVFDNKSYPLYKEKECTFMSDQLACEKFGRKDLNYQFWRWQPHHCDL 120
               S   CNLF GKWVFDN SYPLYKE++C FMSDQLACEKFGRKDL+Y+FWRWQPH CDL
Sbjct:    55 --SGRECNLFEGKWVFDNVSYPLYKEEDCKFMSDQLACEKFGRKDLSYKFWRWQPHTCDL 112

Query:   121 PRFNGTKLLEKLRNKRLVFVGDSLNRGQWVSMVCLVDSLIP-PKLKSMHYKQNGS-LIIF 178
             PRFNGTKLLE+LRNKR+V+VGDSLNRGQWVSMVC+V S+I  PK   MH   NGS LI F
Sbjct:   113 PRFNGTKLLERLRNKRMVYVGDSLNRGQWVSMVCMVSSVITNPKAMYMH--NNGSNLITF 170

Query:   179 KATEYNATIEFYWTPLLVESNSDDPVNHRLPDRIVRVQAIEKHARYWTDADILVFNSYLW 238
             KA EYNATI++YW PLLVESNSDDP NHR PDRIVR+Q+IEKHAR+WT++DI+VFNSYLW
Sbjct:   171 KALEYNATIDYYWAPLLVESNSDDPTNHRFPDRIVRIQSIEKHARHWTNSDIIVFNSYLW 230

Query:   239 WKRSQMEVLWGSFGSPDGIHKDVLMPRVYEMALRTWSEWLEVNINRNKTQLFFVSMSPTH 298
             W+   ++ LWGSF   DGI+K+V M RVYEMAL+T S+WLEV++N N T+LFF+SMSPTH
Sbjct:   231 WRMPHIKSLWGSFEKLDGIYKEVEMVRVYEMALQTLSQWLEVHVNPNITKLFFMSMSPTH 290

Query:   299 QRSEEWGGAKNGNCYGETEQIVQEGYWGRDTDLKMMGIVESVLAELITRGLNVQIINITQ 358
             +R+EEWGG  N NCYGE   I +EGY GR +D KMM ++E+VL  L  RGLN+Q+INITQ
Sbjct:   291 ERAEEWGGILNQNCYGEASLIDKEGYTGRGSDPKMMRVLENVLDGLKNRGLNMQMINITQ 350

Query:   359 LSEYRKEGHPSIYRKQWEALTEDQISNPSSYADCIHWCLPGVPDVWNELVYAYILQH 415
             LSEYRKEGHPSIYRKQW  + E++ISNPSS ADCIHWCLPGVPDVWNEL+YAYIL H
Sbjct:   351 LSEYRKEGHPSIYRKQWGTVKENEISNPSSNADCIHWCLPGVPDVWNELLYAYILDH 407




GO:0008150 "biological_process" evidence=ND
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0010413 "glucuronoxylan metabolic process" evidence=RCA
GO:0042546 "cell wall biogenesis" evidence=RCA
GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA
GO:0045492 "xylan biosynthetic process" evidence=RCA
TAIR|locus:2063125 TBL33 "AT2G40320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065069 TBL28 "TRICHOME BIREFRINGENCE-LIKE 28" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082078 ESK1 "ESKIMO 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2179172 TBL3 "TRICHOME BIREFRINGENCE-LIKE 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182157 TBL11 "TRICHOME BIREFRINGENCE-LIKE 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080389 TBL10 "TRICHOME BIREFRINGENCE-LIKE 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088659 TBL1 "AT3G12060" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00037392001
SubName- Full=Chromosome chr8 scaffold_88, whole genome shotgun sequence; (431 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query415
pfam13839270 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera 2e-99
PLN02629387 PLN02629, PLN02629, powdery mildew resistance 5 5e-91
pfam1441655 pfam14416, PMR5N, PMR5 N terminal Domain 1e-26
>gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
 Score =  297 bits (761), Expect = 2e-99
 Identities = 122/294 (41%), Positives = 176/294 (59%), Gaps = 25/294 (8%)

Query: 120 LPRFNGTKLLEKLRNKRLVFVGDSLNRGQWVSMVCLVDSLIPPKLKSMHYKQNGSLIIFK 179
           LPRF+  + LE+LR KR+VFVGDSL+R QW S+VCL+  + PPK K++    +G L  F+
Sbjct: 1   LPRFDAQQFLERLRGKRVVFVGDSLSRNQWESLVCLLSQVEPPKGKTLER--DGRLFRFR 58

Query: 180 ATEYNATIEFYWTPLLVESNSDDPVNHRLPDRIVRVQAI-EKHARYWTDADILVFNSYLW 238
             +YN TIEFYW+P LVES+     N     R++++ +I EK ++ W  AD+LVFNS  W
Sbjct: 59  FKDYNVTIEFYWSPFLVESD-----NAEEGKRVLKLDSIDEKWSKLWPGADVLVFNSGHW 113

Query: 239 WKRSQMEVLWGSFGSPDGIHKDVLMPRVYEMALRTWSEWLEVNINRNKTQLFFVSMSPTH 298
           W   ++ + W         +K++     Y  AL TW++W++VN+  +KT++FF + SP H
Sbjct: 114 WLHRKVYIGWDYC--QKSNYKEMGFLDAYRKALETWAKWVDVNLPPSKTRVFFRTFSPVH 171

Query: 299 QRSEEWGGAKNGNCYGETEQIVQEGYWGRDTDLKMMGIVESVLAELITRGLNVQIINITQ 358
               EW     G+CY ETE +   G   +    +M+ IV  VL+        V++++IT 
Sbjct: 172 FEGGEWN--TGGSCY-ETEPL--LGSEYKGLTPEMIDIVNEVLSR-AAMKTPVKLLDITL 225

Query: 359 LSEYRKEGHPSIYRKQWEALTEDQISNPSSYADCIHWCLPGVPDVWNELVYAYI 412
           LS+YRK+GHPS+YRK            P    DC+HWCLPGVPD WNEL+ A +
Sbjct: 226 LSQYRKDGHPSVYRKPGP---------PKKEQDCLHWCLPGVPDTWNELLLALL 270


The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270

>gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 Back     alignment and domain information
>gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 415
PLN02629387 powdery mildew resistance 5 100.0
PF13839263 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f 100.0
PF1441655 PMR5N: PMR5 N terminal Domain 99.92
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 98.21
cd01829200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 95.85
cd01838199 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd 95.56
cd01834191 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG 94.66
cd01839208 SGNH_arylesterase_like SGNH_hydrolase subfamily, s 93.35
cd01827188 sialate_O-acetylesterase_like1 sialate O-acetylest 88.9
cd01833157 XynB_like SGNH_hydrolase subfamily, similar to Rum 87.52
>PLN02629 powdery mildew resistance 5 Back     alignment and domain information
Probab=100.00  E-value=2.1e-114  Score=867.52  Aligned_cols=338  Identities=40%  Similarity=0.826  Sum_probs=306.5

Q ss_pred             cCCCCCCCCCcccceeeCCCCCCCCCCCCCC-CccCccccccCCCCCCccceeeeecCCCCCCCCChHHHHHHHcCCcEE
Q 014931           60 LLSSPPRCNLFSGKWVFDNKSYPLYKEKECT-FMSDQLACEKFGRKDLNYQFWRWQPHHCDLPRFNGTKLLEKLRNKRLV  138 (415)
Q Consensus        60 ~~~~~~~Cd~~~G~WV~d~~~~PlY~~~~Cp-~i~~~~~C~~nGRpD~~y~~wrWqP~~C~LprFd~~~fle~LrgK~i~  138 (415)
                      .....+.||+|+|+||+|+ ++|+|++.+|| ||++++||++|||||++|++|||||++|+||||||.+||++||||+||
T Consensus        46 ~~~~~~~CD~f~G~WV~D~-s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~  124 (387)
T PLN02629         46 LQANQSTCALFVGTWVRDD-SYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVM  124 (387)
T ss_pred             CCCCccccCCCCCeEecCC-CCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEE
Confidence            4456778999999999995 78999999999 999999999999999999999999999999999999999999999999


Q ss_pred             EEecchhHHHHHHHHHhhcccCCCCcccceeecCCcEEEEEEeccCeeEEEEEcccccccCCCCCCCCCCCcceeeehhh
Q 014931          139 FVGDSLNRGQWVSMVCLVDSLIPPKLKSMHYKQNGSLIIFKATEYNATIEFYWTPLLVESNSDDPVNHRLPDRIVRVQAI  218 (415)
Q Consensus       139 FVGDSl~Rnq~eSLlClL~~~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~f~wsPfLv~~~~~~~~~~~~~~~~l~lD~i  218 (415)
                      ||||||+|||||||+|||+++++...+.+.+  ++++.+|+|++||+||+||||||||+.+..+      ..++++||++
T Consensus       125 FVGDSL~RNQ~eSLvClL~~~~p~~~~~~~~--~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~------~~~~l~LD~i  196 (387)
T PLN02629        125 FVGDSLGRNQWESLICLISSSVPSTRTQMSR--GDPLSTFKFLDYGVSISFYKAPYLVDIDAVQ------GKRVLKLEEI  196 (387)
T ss_pred             EeccccchhHHHHHHHHhhccCCCCceeeec--CCceEEEEeccCCEEEEEEecceEEeeecCC------CceeEEecCc
Confidence            9999999999999999999998876555555  6788999999999999999999999986542      1347999999


Q ss_pred             hhhhccCCCCcEEEEeecccccccccccccccccCCCCcccccchHHHHHHHHHHHHHHHHhhcCCCCceEEEeeCCCCC
Q 014931          219 EKHARYWTDADILVFNSYLWWKRSQMEVLWGSFGSPDGIHKDVLMPRVYEMALRTWSEWLEVNINRNKTQLFFVSMSPTH  298 (415)
Q Consensus       219 ~~~~~~w~~~DVlV~ntG~Ww~~~~~~~~~g~~~~~~~~~~~~~~~~ayr~al~t~~~~v~~~~~~~~t~VffRt~SP~H  298 (415)
                      ++++..|.++|||||||||||.++.....++++++|+.++++|++..|||+||+||++||++++++.+|+|||||+||+|
T Consensus       197 d~~a~~w~~~DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~H  276 (387)
T PLN02629        197 SGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTH  276 (387)
T ss_pred             chhhhhhccCCEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCccc
Confidence            99999999999999999999999988888899999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCC---CCCCCCCCccccccCcccCCCCchHHHHHHHHHHHHHhhcCCcEEEeecccccccccCCCCccccccc
Q 014931          299 QRSEEWGGA---KNGNCYGETEQIVQEGYWGRDTDLKMMGIVESVLAELITRGLNVQIINITQLSEYRKEGHPSIYRKQW  375 (415)
Q Consensus       299 f~~g~W~~~---~gg~C~~~T~P~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~lLDIt~mS~~R~DgHps~y~~~~  375 (415)
                      |+||+||+.   .+|+|+++|+|+.++++.+  ....+++++++++++++   .+|+|||||+||++|+|||||+|+.  
T Consensus       277 fe~g~Wn~gg~~~~~~C~~et~P~~~~~~~~--~~~~~~~~ve~v~~~~~---~~v~lLDIT~ls~lR~DgHPs~Y~~--  349 (387)
T PLN02629        277 YNPSEWSAGASTTTKNCYGETTPMSGMTYPG--AYPDQMRVVDEVIRGMH---NPAYLLDITLLSELRKDGHPSIYSG--  349 (387)
T ss_pred             ccCCCcCCCCCCCCCCCccCCccCcCccccC--cchHHHHHHHHHHHhcC---CceEEEechhhhhcCCCCCcccccC--
Confidence            999999972   2367999999998776654  35556778899988774   8999999999999999999999974  


Q ss_pred             ccccccccCCCCCCCCccccccCCcchhHHHHHHHHHhc
Q 014931          376 EALTEDQISNPSSYADCIHWCLPGVPDVWNELVYAYILQ  414 (415)
Q Consensus       376 ~~~~~~~~~~~~~~~DC~HWCLPGv~D~WNelL~~~l~~  414 (415)
                       +++++++.+|..++||+||||||||||||||||++|+.
T Consensus       350 -~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~~  387 (387)
T PLN02629        350 -DLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF  387 (387)
T ss_pred             -CCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHhC
Confidence             34567778888899999999999999999999999973



>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>PF14416 PMR5N: PMR5 N terminal Domain Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins Back     alignment and domain information
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A Back     alignment and domain information
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query415
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-10
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 60.6 bits (146), Expect = 5e-10
 Identities = 71/507 (14%), Positives = 137/507 (27%), Gaps = 169/507 (33%)

Query: 30  LLFFAAVYVTQNNVQLVED--RLITSKRSRDLLLSSPPRCN----LFSGKWVFDNKSYPL 83
           L  F   +V   + + V+D  + I SK   D ++ S    +    LF   W   +K   +
Sbjct: 22  LSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLF---WTLLSKQEEM 78

Query: 84  YKEKECTFMSDQLACEKFGRKDLNYQF----WRWQPHHCDLPRFNGTKLLEKLRNKRLVF 139
            ++    F+ + L         +NY+F     + +     +      +  ++L N   VF
Sbjct: 79  VQK----FVEEVL--------RINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVF 126

Query: 140 VGDSLNRGQWVSMVCLVDSLIPPKLKSMHY----------KQNGSLIIFKATEYNATIEF 189
              +++R Q      L  +L+  +L+              K    + +     Y    + 
Sbjct: 127 AKYNVSRLQPYLK--LRQALL--ELRPAKNVLIDGVLGSGKT--WVALDVCLSYKVQCKM 180

Query: 190 ----YW-------TPLLV---------------ESNSDDPVNHRLP-----DRIVRVQAI 218
               +W       +P  V                S SD   N +L        + R+   
Sbjct: 181 DFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240

Query: 219 EKHARY-------WTDADIL-VFN------------------SYLWWKRSQMEVLWGSFG 252
           + +            +A     FN                  S        ++    +  
Sbjct: 241 KPYENCLLVLLNVQ-NAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLT 299

Query: 253 SPD---------GIHKDVL-------MPRVYEM---ALR----TWSEWLEVNINRNKT-- 287
             +               L        PR   +   ++R    TW  W  VN ++  T  
Sbjct: 300 PDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTII 359

Query: 288 QLFFVSMSPTHQRSEEWGGAKNGNCYGE----------TEQIVQEGYWGRDTDLKMMGIV 337
           +     + P   R            +                +    W           V
Sbjct: 360 ESSLNVLEPAEYR----------KMFDRLSVFPPSAHIPTI-LLSLIWFDVIK----SDV 404

Query: 338 ESVLAELITRGLNVQIINITQLSEYRKEGHPSIY------RKQWEALTE--DQISNPSSY 389
             V+ +L    L         + +  KE   SI       + + E        I +   Y
Sbjct: 405 MVVVNKLHKYSL---------VEKQPKESTISIPSIYLELKVKLENEYALHRSIVD--HY 453

Query: 390 ADCIHWCLPG-VPDVWNELVYAYILQH 415
                +     +P   ++  Y++I  H
Sbjct: 454 NIPKTFDSDDLIPPYLDQYFYSHIGHH 480


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query415
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 97.6
3dci_A232 Arylesterase; SGNH_hydrolase SUBF structural genom 95.51
2o14_A375 Hypothetical protein YXIM; NESG, X-RAY, SR595, str 81.79
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
Probab=97.60  E-value=0.00044  Score=61.79  Aligned_cols=51  Identities=18%  Similarity=0.269  Sum_probs=37.9

Q ss_pred             CCCcEEEEeecccccccccccccccccCCCCcccccchHHHHHHHHHHHHHHHHhhcCCCCceEEEeeCCCCC
Q 014931          226 TDADILVFNSYLWWKRSQMEVLWGSFGSPDGIHKDVLMPRVYEMALRTWSEWLEVNINRNKTQLFFVSMSPTH  298 (415)
Q Consensus       226 ~~~DVlV~ntG~Ww~~~~~~~~~g~~~~~~~~~~~~~~~~ayr~al~t~~~~v~~~~~~~~t~VffRt~SP~H  298 (415)
                      ..+|+|||+.|..=..                    ...+.|++.|+++++.+.+.  .++++|+|-+..|..
T Consensus        73 ~~pd~Vvi~~G~ND~~--------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~  123 (200)
T 4h08_A           73 TKFDVIHFNNGLHGFD--------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVR  123 (200)
T ss_dssp             SCCSEEEECCCSSCTT--------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCE
T ss_pred             CCCCeEEEEeeeCCCC--------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCc
Confidence            5789999999875210                    12567888999998887653  457889999998874



>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} Back     alignment and structure
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query415
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 96.94
d2o14a2208 Hypothetical protein YxiM {Bacillus subtilis [TaxI 96.85
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 81.2
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: BT2961-like
domain: Uncharacterized protein Lp3323
species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.94  E-value=0.0062  Score=51.52  Aligned_cols=60  Identities=18%  Similarity=0.082  Sum_probs=30.8

Q ss_pred             CCCcEEEEeecccccccccccccccccCCCCcccccchHHHHHHHHHHHHHHHHhhcCCCCceEEEeeCCCC
Q 014931          226 TDADILVFNSYLWWKRSQMEVLWGSFGSPDGIHKDVLMPRVYEMALRTWSEWLEVNINRNKTQLFFVSMSPT  297 (415)
Q Consensus       226 ~~~DVlV~ntG~Ww~~~~~~~~~g~~~~~~~~~~~~~~~~ayr~al~t~~~~v~~~~~~~~t~VffRt~SP~  297 (415)
                      ..+|+||+..|.-=.....  ..+..    ...    ....|+.+++.+++.+.+.  .+++.+++-+.-|.
T Consensus        64 ~~~d~Vii~~G~ND~~~~~--~~~~~----~~~----~~~~~~~~~~~~i~~i~~~--~~~~~ii~~~~~~~  123 (207)
T d3dc7a1          64 EDADFIAVFGGVNDYGRDQ--PLGQY----GDC----DMTTFYGALMMLLTGLQTN--WPTVPKLFISAIHI  123 (207)
T ss_dssp             TTCSEEEEECCHHHHHTTC--CCCCT----TCC----STTSHHHHHHHHHHHHHHH--CTTSCEEEEECCCC
T ss_pred             CCCCEEEEccCchhhhccc--Ccccc----ccc----cHHHHHHHHHHHHHHHHHh--CCceEEEEecCCCC
Confidence            4689999998865211100  00000    001    1234555555666665443  35677777776655



>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure