Citrus Sinensis ID: 014931
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 415 | ||||||
| 297735617 | 431 | unnamed protein product [Vitis vinifera] | 0.983 | 0.946 | 0.730 | 0.0 | |
| 225439532 | 408 | PREDICTED: uncharacterized protein LOC10 | 0.983 | 1.0 | 0.730 | 0.0 | |
| 357468537 | 408 | hypothetical protein MTR_4g014440 [Medic | 0.978 | 0.995 | 0.713 | 1e-175 | |
| 224139260 | 402 | predicted protein [Populus trichocarpa] | 0.963 | 0.995 | 0.751 | 1e-175 | |
| 147771889 | 387 | hypothetical protein VITISV_026158 [Viti | 0.932 | 1.0 | 0.744 | 1e-174 | |
| 356506561 | 411 | PREDICTED: uncharacterized protein LOC10 | 0.968 | 0.978 | 0.713 | 1e-174 | |
| 357506157 | 412 | hypothetical protein MTR_7g070060 [Medic | 0.987 | 0.995 | 0.681 | 1e-173 | |
| 363807192 | 415 | uncharacterized protein LOC100792755 [Gl | 0.992 | 0.992 | 0.705 | 1e-172 | |
| 356568144 | 410 | PREDICTED: uncharacterized protein LOC10 | 0.985 | 0.997 | 0.698 | 1e-171 | |
| 357506159 | 403 | hypothetical protein MTR_7g070060 [Medic | 0.966 | 0.995 | 0.667 | 1e-167 |
| >gi|297735617|emb|CBI18111.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/415 (73%), Positives = 347/415 (83%), Gaps = 7/415 (1%)
Query: 1 MAAKRQLIVPAATWAIRSIFQSLVALLIALLFFAAVYVTQNNVQLVEDRLITSKRSRDLL 60
MA K ++ A TW +R F SL+ LL+A L AAVY+T + +EDR + +
Sbjct: 24 MAQKLHMV--AGTWGVRCSFHSLMGLLVATLVVAAVYLTGEGGRWLEDRKSICQNCGE-- 79
Query: 61 LSSPPRCNLFSGKWVFDNKSYPLYKEKECTFMSDQLACEKFGRKDLNYQFWRWQPHHCDL 120
SS CNLFSGKWVFDN+S+PLYKEK+CTFMSDQLACEKFGR+DL+YQ WRWQPH CDL
Sbjct: 80 -SSCSGCNLFSGKWVFDNRSHPLYKEKQCTFMSDQLACEKFGRQDLSYQNWRWQPHQCDL 138
Query: 121 PRFNGTKLLEKLRNKRLVFVGDSLNRGQWVSMVCLVDSLIPPKLKSMHYKQNGSLIIFKA 180
PRFN T LLE+LR KRLVFVGDSLNRGQWVSMVCLVDS IPP LKSMH NGSL FKA
Sbjct: 139 PRFNATALLERLRGKRLVFVGDSLNRGQWVSMVCLVDSSIPPNLKSMH--TNGSLTTFKA 196
Query: 181 TEYNATIEFYWTPLLVESNSDDPVNHRLPDRIVRVQAIEKHARYWTDADILVFNSYLWWK 240
TEYNATIEFYW P+LVESNSDDPV HRLP+R+VRVQAIEKHAR+WTDADILVFN+YLWW+
Sbjct: 197 TEYNATIEFYWAPMLVESNSDDPVMHRLPERVVRVQAIEKHARHWTDADILVFNTYLWWR 256
Query: 241 RSQMEVLWGSFGSPDGIHKDVLMPRVYEMALRTWSEWLEVNINRNKTQLFFVSMSPTHQR 300
RS+M+VLWGSF SPDGI+KDV M RVYEMAL+TWS+WLEV++NR+KTQLFFVSMSPTHQR
Sbjct: 257 RSKMKVLWGSFESPDGIYKDVEMVRVYEMALKTWSDWLEVHVNRSKTQLFFVSMSPTHQR 316
Query: 301 SEEWGGAKNGNCYGETEQIVQEGYWGRDTDLKMMGIVESVLAELITRGLNVQIINITQLS 360
+EEWG A+ NCY ETE I QEGYWG + KMMG+V+ + L RG+NV+++NITQLS
Sbjct: 317 AEEWGAAEGQNCYSETELISQEGYWGNGSCRKMMGVVDDTIDRLKKRGVNVKVLNITQLS 376
Query: 361 EYRKEGHPSIYRKQWEALTEDQISNPSSYADCIHWCLPGVPDVWNELVYAYILQH 415
EYRKEGHPSIYRKQWE LTEDQ+S+P SYADCIHWCLPGVPDVWNEL+YAYIL +
Sbjct: 377 EYRKEGHPSIYRKQWEPLTEDQLSDPKSYADCIHWCLPGVPDVWNELLYAYILHY 431
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225439532|ref|XP_002264195.1| PREDICTED: uncharacterized protein LOC100261884 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|357468537|ref|XP_003604553.1| hypothetical protein MTR_4g014440 [Medicago truncatula] gi|355505608|gb|AES86750.1| hypothetical protein MTR_4g014440 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|224139260|ref|XP_002323025.1| predicted protein [Populus trichocarpa] gi|222867655|gb|EEF04786.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|147771889|emb|CAN60253.1| hypothetical protein VITISV_026158 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356506561|ref|XP_003522048.1| PREDICTED: uncharacterized protein LOC100789678 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357506157|ref|XP_003623367.1| hypothetical protein MTR_7g070060 [Medicago truncatula] gi|355498382|gb|AES79585.1| hypothetical protein MTR_7g070060 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|363807192|ref|NP_001242606.1| uncharacterized protein LOC100792755 [Glycine max] gi|255642447|gb|ACU21487.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356568144|ref|XP_003552273.1| PREDICTED: uncharacterized protein LOC100785941 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357506159|ref|XP_003623368.1| hypothetical protein MTR_7g070060 [Medicago truncatula] gi|355498383|gb|AES79586.1| hypothetical protein MTR_7g070060 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 415 | ||||||
| TAIR|locus:2057145 | 410 | TBL34 "AT2G38320" [Arabidopsis | 0.968 | 0.980 | 0.652 | 9e-148 | |
| TAIR|locus:2063125 | 425 | TBL33 "AT2G40320" [Arabidopsis | 0.816 | 0.797 | 0.513 | 2.6e-102 | |
| TAIR|locus:2065069 | 424 | TBL28 "TRICHOME BIREFRINGENCE- | 0.831 | 0.813 | 0.504 | 1.3e-98 | |
| TAIR|locus:2082078 | 487 | ESK1 "ESKIMO 1" [Arabidopsis t | 0.826 | 0.704 | 0.487 | 4.2e-95 | |
| TAIR|locus:2179172 | 434 | TBL3 "TRICHOME BIREFRINGENCE-L | 0.826 | 0.790 | 0.457 | 5.1e-90 | |
| TAIR|locus:2182157 | 464 | TBL11 "TRICHOME BIREFRINGENCE- | 0.802 | 0.717 | 0.389 | 1.2e-65 | |
| TAIR|locus:2080389 | 469 | TBL10 "TRICHOME BIREFRINGENCE- | 0.836 | 0.739 | 0.376 | 8.5e-65 | |
| TAIR|locus:2178813 | 402 | PMR5 "AT5G58600" [Arabidopsis | 0.792 | 0.818 | 0.378 | 1.8e-64 | |
| TAIR|locus:2088659 | 556 | TBL1 "AT3G12060" [Arabidopsis | 0.831 | 0.620 | 0.384 | 8.8e-63 | |
| TAIR|locus:2055878 | 364 | AT2G31110 "AT2G31110" [Arabido | 0.710 | 0.810 | 0.356 | 1.1e-62 |
| TAIR|locus:2057145 TBL34 "AT2G38320" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1443 (513.0 bits), Expect = 9.0e-148, P = 9.0e-148
Identities = 272/417 (65%), Positives = 326/417 (78%)
Query: 3 AKRQLIVPAATWAIRSIFQSXXXXXXXXXXXXXXYVTQNNV--QLVEDRLITSKRSRDLL 60
AKRQL++ IR+ F + ++++N++ + + +T R D
Sbjct: 2 AKRQLLM----LGIRTSFHTIAAVLVAGLIFTAVFLSRNSLPKENPQSHGVTD-RGGD-- 54
Query: 61 LSSPPRCNLFSGKWVFDNKSYPLYKEKECTFMSDQLACEKFGRKDLNYQFWRWQPHHCDL 120
S CNLF GKWVFDN SYPLYKE++C FMSDQLACEKFGRKDL+Y+FWRWQPH CDL
Sbjct: 55 --SGRECNLFEGKWVFDNVSYPLYKEEDCKFMSDQLACEKFGRKDLSYKFWRWQPHTCDL 112
Query: 121 PRFNGTKLLEKLRNKRLVFVGDSLNRGQWVSMVCLVDSLIP-PKLKSMHYKQNGS-LIIF 178
PRFNGTKLLE+LRNKR+V+VGDSLNRGQWVSMVC+V S+I PK MH NGS LI F
Sbjct: 113 PRFNGTKLLERLRNKRMVYVGDSLNRGQWVSMVCMVSSVITNPKAMYMH--NNGSNLITF 170
Query: 179 KATEYNATIEFYWTPLLVESNSDDPVNHRLPDRIVRVQAIEKHARYWTDADILVFNSYLW 238
KA EYNATI++YW PLLVESNSDDP NHR PDRIVR+Q+IEKHAR+WT++DI+VFNSYLW
Sbjct: 171 KALEYNATIDYYWAPLLVESNSDDPTNHRFPDRIVRIQSIEKHARHWTNSDIIVFNSYLW 230
Query: 239 WKRSQMEVLWGSFGSPDGIHKDVLMPRVYEMALRTWSEWLEVNINRNKTQLFFVSMSPTH 298
W+ ++ LWGSF DGI+K+V M RVYEMAL+T S+WLEV++N N T+LFF+SMSPTH
Sbjct: 231 WRMPHIKSLWGSFEKLDGIYKEVEMVRVYEMALQTLSQWLEVHVNPNITKLFFMSMSPTH 290
Query: 299 QRSEEWGGAKNGNCYGETEQIVQEGYWGRDTDLKMMGIVESVLAELITRGLNVQIINITQ 358
+R+EEWGG N NCYGE I +EGY GR +D KMM ++E+VL L RGLN+Q+INITQ
Sbjct: 291 ERAEEWGGILNQNCYGEASLIDKEGYTGRGSDPKMMRVLENVLDGLKNRGLNMQMINITQ 350
Query: 359 LSEYRKEGHPSIYRKQWEALTEDQISNPSSYADCIHWCLPGVPDVWNELVYAYILQH 415
LSEYRKEGHPSIYRKQW + E++ISNPSS ADCIHWCLPGVPDVWNEL+YAYIL H
Sbjct: 351 LSEYRKEGHPSIYRKQWGTVKENEISNPSSNADCIHWCLPGVPDVWNELLYAYILDH 407
|
|
| TAIR|locus:2063125 TBL33 "AT2G40320" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2065069 TBL28 "TRICHOME BIREFRINGENCE-LIKE 28" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2082078 ESK1 "ESKIMO 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2179172 TBL3 "TRICHOME BIREFRINGENCE-LIKE 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2182157 TBL11 "TRICHOME BIREFRINGENCE-LIKE 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2080389 TBL10 "TRICHOME BIREFRINGENCE-LIKE 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2088659 TBL1 "AT3G12060" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00037392001 | SubName- Full=Chromosome chr8 scaffold_88, whole genome shotgun sequence; (431 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 415 | |||
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 2e-99 | |
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 5e-91 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 1e-26 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
Score = 297 bits (761), Expect = 2e-99
Identities = 122/294 (41%), Positives = 176/294 (59%), Gaps = 25/294 (8%)
Query: 120 LPRFNGTKLLEKLRNKRLVFVGDSLNRGQWVSMVCLVDSLIPPKLKSMHYKQNGSLIIFK 179
LPRF+ + LE+LR KR+VFVGDSL+R QW S+VCL+ + PPK K++ +G L F+
Sbjct: 1 LPRFDAQQFLERLRGKRVVFVGDSLSRNQWESLVCLLSQVEPPKGKTLER--DGRLFRFR 58
Query: 180 ATEYNATIEFYWTPLLVESNSDDPVNHRLPDRIVRVQAI-EKHARYWTDADILVFNSYLW 238
+YN TIEFYW+P LVES+ N R++++ +I EK ++ W AD+LVFNS W
Sbjct: 59 FKDYNVTIEFYWSPFLVESD-----NAEEGKRVLKLDSIDEKWSKLWPGADVLVFNSGHW 113
Query: 239 WKRSQMEVLWGSFGSPDGIHKDVLMPRVYEMALRTWSEWLEVNINRNKTQLFFVSMSPTH 298
W ++ + W +K++ Y AL TW++W++VN+ +KT++FF + SP H
Sbjct: 114 WLHRKVYIGWDYC--QKSNYKEMGFLDAYRKALETWAKWVDVNLPPSKTRVFFRTFSPVH 171
Query: 299 QRSEEWGGAKNGNCYGETEQIVQEGYWGRDTDLKMMGIVESVLAELITRGLNVQIINITQ 358
EW G+CY ETE + G + +M+ IV VL+ V++++IT
Sbjct: 172 FEGGEWN--TGGSCY-ETEPL--LGSEYKGLTPEMIDIVNEVLSR-AAMKTPVKLLDITL 225
Query: 359 LSEYRKEGHPSIYRKQWEALTEDQISNPSSYADCIHWCLPGVPDVWNELVYAYI 412
LS+YRK+GHPS+YRK P DC+HWCLPGVPD WNEL+ A +
Sbjct: 226 LSQYRKDGHPSVYRKPGP---------PKKEQDCLHWCLPGVPDTWNELLLALL 270
|
The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 415 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.92 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 98.21 | |
| cd01829 | 200 | SGNH_hydrolase_peri2 SGNH_peri2; putative periplas | 95.85 | |
| cd01838 | 199 | Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd | 95.56 | |
| cd01834 | 191 | SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG | 94.66 | |
| cd01839 | 208 | SGNH_arylesterase_like SGNH_hydrolase subfamily, s | 93.35 | |
| cd01827 | 188 | sialate_O-acetylesterase_like1 sialate O-acetylest | 88.9 | |
| cd01833 | 157 | XynB_like SGNH_hydrolase subfamily, similar to Rum | 87.52 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-114 Score=867.52 Aligned_cols=338 Identities=40% Similarity=0.826 Sum_probs=306.5
Q ss_pred cCCCCCCCCCcccceeeCCCCCCCCCCCCCC-CccCccccccCCCCCCccceeeeecCCCCCCCCChHHHHHHHcCCcEE
Q 014931 60 LLSSPPRCNLFSGKWVFDNKSYPLYKEKECT-FMSDQLACEKFGRKDLNYQFWRWQPHHCDLPRFNGTKLLEKLRNKRLV 138 (415)
Q Consensus 60 ~~~~~~~Cd~~~G~WV~d~~~~PlY~~~~Cp-~i~~~~~C~~nGRpD~~y~~wrWqP~~C~LprFd~~~fle~LrgK~i~ 138 (415)
.....+.||+|+|+||+|+ ++|+|++.+|| ||++++||++|||||++|++|||||++|+||||||.+||++||||+||
T Consensus 46 ~~~~~~~CD~f~G~WV~D~-s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~ 124 (387)
T PLN02629 46 LQANQSTCALFVGTWVRDD-SYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVM 124 (387)
T ss_pred CCCCccccCCCCCeEecCC-CCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEE
Confidence 4456778999999999995 78999999999 999999999999999999999999999999999999999999999999
Q ss_pred EEecchhHHHHHHHHHhhcccCCCCcccceeecCCcEEEEEEeccCeeEEEEEcccccccCCCCCCCCCCCcceeeehhh
Q 014931 139 FVGDSLNRGQWVSMVCLVDSLIPPKLKSMHYKQNGSLIIFKATEYNATIEFYWTPLLVESNSDDPVNHRLPDRIVRVQAI 218 (415)
Q Consensus 139 FVGDSl~Rnq~eSLlClL~~~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~f~wsPfLv~~~~~~~~~~~~~~~~l~lD~i 218 (415)
||||||+|||||||+|||+++++...+.+.+ ++++.+|+|++||+||+||||||||+.+..+ ..++++||++
T Consensus 125 FVGDSL~RNQ~eSLvClL~~~~p~~~~~~~~--~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~------~~~~l~LD~i 196 (387)
T PLN02629 125 FVGDSLGRNQWESLICLISSSVPSTRTQMSR--GDPLSTFKFLDYGVSISFYKAPYLVDIDAVQ------GKRVLKLEEI 196 (387)
T ss_pred EeccccchhHHHHHHHHhhccCCCCceeeec--CCceEEEEeccCCEEEEEEecceEEeeecCC------CceeEEecCc
Confidence 9999999999999999999998876555555 6788999999999999999999999986542 1347999999
Q ss_pred hhhhccCCCCcEEEEeecccccccccccccccccCCCCcccccchHHHHHHHHHHHHHHHHhhcCCCCceEEEeeCCCCC
Q 014931 219 EKHARYWTDADILVFNSYLWWKRSQMEVLWGSFGSPDGIHKDVLMPRVYEMALRTWSEWLEVNINRNKTQLFFVSMSPTH 298 (415)
Q Consensus 219 ~~~~~~w~~~DVlV~ntG~Ww~~~~~~~~~g~~~~~~~~~~~~~~~~ayr~al~t~~~~v~~~~~~~~t~VffRt~SP~H 298 (415)
++++..|.++|||||||||||.++.....++++++|+.++++|++..|||+||+||++||++++++.+|+|||||+||+|
T Consensus 197 d~~a~~w~~~DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~H 276 (387)
T PLN02629 197 SGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTH 276 (387)
T ss_pred chhhhhhccCCEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCccc
Confidence 99999999999999999999999988888899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCC---CCCCCCCCccccccCcccCCCCchHHHHHHHHHHHHHhhcCCcEEEeecccccccccCCCCccccccc
Q 014931 299 QRSEEWGGA---KNGNCYGETEQIVQEGYWGRDTDLKMMGIVESVLAELITRGLNVQIINITQLSEYRKEGHPSIYRKQW 375 (415)
Q Consensus 299 f~~g~W~~~---~gg~C~~~T~P~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~lLDIt~mS~~R~DgHps~y~~~~ 375 (415)
|+||+||+. .+|+|+++|+|+.++++.+ ....+++++++++++++ .+|+|||||+||++|+|||||+|+.
T Consensus 277 fe~g~Wn~gg~~~~~~C~~et~P~~~~~~~~--~~~~~~~~ve~v~~~~~---~~v~lLDIT~ls~lR~DgHPs~Y~~-- 349 (387)
T PLN02629 277 YNPSEWSAGASTTTKNCYGETTPMSGMTYPG--AYPDQMRVVDEVIRGMH---NPAYLLDITLLSELRKDGHPSIYSG-- 349 (387)
T ss_pred ccCCCcCCCCCCCCCCCccCCccCcCccccC--cchHHHHHHHHHHHhcC---CceEEEechhhhhcCCCCCcccccC--
Confidence 999999972 2367999999998776654 35556778899988774 8999999999999999999999974
Q ss_pred ccccccccCCCCCCCCccccccCCcchhHHHHHHHHHhc
Q 014931 376 EALTEDQISNPSSYADCIHWCLPGVPDVWNELVYAYILQ 414 (415)
Q Consensus 376 ~~~~~~~~~~~~~~~DC~HWCLPGv~D~WNelL~~~l~~ 414 (415)
+++++++.+|..++||+||||||||||||||||++|+.
T Consensus 350 -~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~~ 387 (387)
T PLN02629 350 -DLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF 387 (387)
T ss_pred -CCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHhC
Confidence 34567778888899999999999999999999999973
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins | Back alignment and domain information |
|---|
| >cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A | Back alignment and domain information |
|---|
| >cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 415 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-10 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 60.6 bits (146), Expect = 5e-10
Identities = 71/507 (14%), Positives = 137/507 (27%), Gaps = 169/507 (33%)
Query: 30 LLFFAAVYVTQNNVQLVED--RLITSKRSRDLLLSSPPRCN----LFSGKWVFDNKSYPL 83
L F +V + + V+D + I SK D ++ S + LF W +K +
Sbjct: 22 LSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLF---WTLLSKQEEM 78
Query: 84 YKEKECTFMSDQLACEKFGRKDLNYQF----WRWQPHHCDLPRFNGTKLLEKLRNKRLVF 139
++ F+ + L +NY+F + + + + ++L N VF
Sbjct: 79 VQK----FVEEVL--------RINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVF 126
Query: 140 VGDSLNRGQWVSMVCLVDSLIPPKLKSMHY----------KQNGSLIIFKATEYNATIEF 189
+++R Q L +L+ +L+ K + + Y +
Sbjct: 127 AKYNVSRLQPYLK--LRQALL--ELRPAKNVLIDGVLGSGKT--WVALDVCLSYKVQCKM 180
Query: 190 ----YW-------TPLLV---------------ESNSDDPVNHRLP-----DRIVRVQAI 218
+W +P V S SD N +L + R+
Sbjct: 181 DFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240
Query: 219 EKHARY-------WTDADIL-VFN------------------SYLWWKRSQMEVLWGSFG 252
+ + +A FN S ++ +
Sbjct: 241 KPYENCLLVLLNVQ-NAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLT 299
Query: 253 SPD---------GIHKDVL-------MPRVYEM---ALR----TWSEWLEVNINRNKT-- 287
+ L PR + ++R TW W VN ++ T
Sbjct: 300 PDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTII 359
Query: 288 QLFFVSMSPTHQRSEEWGGAKNGNCYGE----------TEQIVQEGYWGRDTDLKMMGIV 337
+ + P R + + W V
Sbjct: 360 ESSLNVLEPAEYR----------KMFDRLSVFPPSAHIPTI-LLSLIWFDVIK----SDV 404
Query: 338 ESVLAELITRGLNVQIINITQLSEYRKEGHPSIY------RKQWEALTE--DQISNPSSY 389
V+ +L L + + KE SI + + E I + Y
Sbjct: 405 MVVVNKLHKYSL---------VEKQPKESTISIPSIYLELKVKLENEYALHRSIVD--HY 453
Query: 390 ADCIHWCLPG-VPDVWNELVYAYILQH 415
+ +P ++ Y++I H
Sbjct: 454 NIPKTFDSDDLIPPYLDQYFYSHIGHH 480
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 415 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 97.6 | |
| 3dci_A | 232 | Arylesterase; SGNH_hydrolase SUBF structural genom | 95.51 | |
| 2o14_A | 375 | Hypothetical protein YXIM; NESG, X-RAY, SR595, str | 81.79 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00044 Score=61.79 Aligned_cols=51 Identities=18% Similarity=0.269 Sum_probs=37.9
Q ss_pred CCCcEEEEeecccccccccccccccccCCCCcccccchHHHHHHHHHHHHHHHHhhcCCCCceEEEeeCCCCC
Q 014931 226 TDADILVFNSYLWWKRSQMEVLWGSFGSPDGIHKDVLMPRVYEMALRTWSEWLEVNINRNKTQLFFVSMSPTH 298 (415)
Q Consensus 226 ~~~DVlV~ntG~Ww~~~~~~~~~g~~~~~~~~~~~~~~~~ayr~al~t~~~~v~~~~~~~~t~VffRt~SP~H 298 (415)
..+|+|||+.|..=.. ...+.|++.|+++++.+.+. .++++|+|-+..|..
T Consensus 73 ~~pd~Vvi~~G~ND~~--------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~ 123 (200)
T 4h08_A 73 TKFDVIHFNNGLHGFD--------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVR 123 (200)
T ss_dssp SCCSEEEECCCSSCTT--------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCE
T ss_pred CCCCeEEEEeeeCCCC--------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCc
Confidence 5789999999875210 12567888999998887653 457889999998874
|
| >3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
| >2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 415 | |||
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 96.94 | |
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 96.85 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 81.2 |
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: BT2961-like domain: Uncharacterized protein Lp3323 species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.94 E-value=0.0062 Score=51.52 Aligned_cols=60 Identities=18% Similarity=0.082 Sum_probs=30.8
Q ss_pred CCCcEEEEeecccccccccccccccccCCCCcccccchHHHHHHHHHHHHHHHHhhcCCCCceEEEeeCCCC
Q 014931 226 TDADILVFNSYLWWKRSQMEVLWGSFGSPDGIHKDVLMPRVYEMALRTWSEWLEVNINRNKTQLFFVSMSPT 297 (415)
Q Consensus 226 ~~~DVlV~ntG~Ww~~~~~~~~~g~~~~~~~~~~~~~~~~ayr~al~t~~~~v~~~~~~~~t~VffRt~SP~ 297 (415)
..+|+||+..|.-=..... ..+.. ... ....|+.+++.+++.+.+. .+++.+++-+.-|.
T Consensus 64 ~~~d~Vii~~G~ND~~~~~--~~~~~----~~~----~~~~~~~~~~~~i~~i~~~--~~~~~ii~~~~~~~ 123 (207)
T d3dc7a1 64 EDADFIAVFGGVNDYGRDQ--PLGQY----GDC----DMTTFYGALMMLLTGLQTN--WPTVPKLFISAIHI 123 (207)
T ss_dssp TTCSEEEEECCHHHHHTTC--CCCCT----TCC----STTSHHHHHHHHHHHHHHH--CTTSCEEEEECCCC
T ss_pred CCCCEEEEccCchhhhccc--Ccccc----ccc----cHHHHHHHHHHHHHHHHHh--CCceEEEEecCCCC
Confidence 4689999998865211100 00000 001 1234555555666665443 35677777776655
|
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|