Citrus Sinensis ID: 014963

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-----
MGTRTEGLLGKLICVLLSCLMVMAAASSRATIMGKVSNTKFHHHSERLRRNLLANGLGKSPPMGWNSWNHFWCDINEDIVKAAADALVSSGLSKLGYEYVNIDDCWGEQVRDENGNLQAKNATFPSGIKALADYVHSKGLKLGMYSSAGYYTCSKQMPGSLGYEEQDAKTFALWGVDYLKYDNCYTDGSKPMDRYPIMTRALMKAGRPIYYSLCEWGDMHPALWGFQVGNSWRTTGDITDTFESVMSRADANEVYADYARPGGWNDPDMLEVGNGGMTKDEYIIHFSLWAISKAPLLLGCDVRNLTKDTMDIIGNKEVIAINQDPLGVQAKKVRTDVEIWTAPLSGYRFAVLIVNRDQWPANVTTHLEDFGIPPKTSVTARDLWEHKTLETPLAGNLSANLDPHTCKMYLLQPIS
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccEEEEccccccccccccccEEEccccccccHHHHHHHHHHcccEEEEEEccccccccccccccccHHHHHHHHHHHccccEEEEccccccccccccHHHHHHHHHHHHccccEEcccccccccccccccccccEEEEcccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHccccHHHHHcccccccccEEEEEccEEEEEEEcccccEEEEEEEcccccEEEEEEcccccccccccEEEEEcccccccccccccEEEEEEccccEEEEEEEEcc
ccccHHHccHcHEHEEHEEEEEEEccccHHHHHHHHHHHHHcccccHHHHHHHcccccccccEEEEcHHHHcccccHHHHHHHHHHHHHccHHHHcccEEEcccccEcccccccccccEccccccccHHHHHHHHHHcccEEEEEEEcccEccccccEcccccHHHHHHHHHHHcccEEEEEccccccccHHHHHHHHHHHHHHHccccEEEEEccccccHHHcHHHcccEEEccccccccHHHHHHHHHHHHccHHHcEccEEEEccccccccccccHHHHHHHHHHHHHccccEEEccccccccHHHHHHHccHHHHHHHccccccccEEEEEEEEEEEEEcccccEEEEEEEcccccEEEEEEHHHcccccccEEEEEEccccEEcccccccEEEEEEccccEEEEEEEccc
MGTRTEGLLGKLICVLLSCLMVMAAASSRAtimgkvsntkfhhhsERLRRNLLanglgksppmgwnswnhfwcDINEDIVKAAADALVSSglsklgyeyvniddcwgeqvrdengnlqaknatfpSGIKALADYVHskglklgmyssagyytcskqmpgslgyeeqdAKTFALWGVdylkydncytdgskpmdrypIMTRALMKAgrpiyyslcewgdmhpalwgfqvgnswrttgditdtfESVMSRADANevyadyarpggwndpdmlevgnggmtkdeYIIHFSLWAIskaplllgcdvrnltkdtmdiignkeviainqdplgvqakkvrtdveiwtaplsgYRFAVLIVnrdqwpanvtthledfgippktsvtardlwehktletplagnlsanldphtckmyllqpis
mgtrtegllGKLICVLLSCLMVMAAASSRATIMGKVSNTKFHHHSERLRRNLLANGLGKSPPMGWNSWNHFWCDINEDIVKAAADALVSSGLSKLGYEYVNIDDCWGEQVRDENGNLQAKNATFPSGIKALADYVHSKGLKLGMYSSAGYYTCSKQMPGSLGYEEQDAKTFALWGVDYLKYDNCytdgskpmdryPIMTRALMKAGRPIYYSLCEWGDMHPALWGFQVGNSWRTTGDITDTFESVMSRADANEVYADyarpggwndPDMLEVGNGGMTKDEYIIHFSLWAISKAPLLLGCDVRNLTKDTMDIIGNKeviainqdplgvqaKKVRTDVEIWTAPLSGYRFAVLIVNRDQWPANVTThledfgippkTSVTARDLWEHKTLETplagnlsanldphTCKMYLLQPIS
MGTRTEGLLGKLICVLLSCLMVMAAASSRATIMGKVSNTKFHHHSErlrrnllanglgKSPPMGWNSWNHFWCDINEDIVKAAADALVSSGLSKLGYEYVNIDDCWGEQVRDENGNLQAKNATFPSGIKALADYVHSKGLKLGMYSSAGYYTCSKQMPGSLGYEEQDAKTFALWGVDYLKYDNCYTDGSKPMDRYPIMTRALMKAGRPIYYSLCEWGDMHPALWGFQVGNSWRTTGDITDTFESVMSRADANEVYADYARPGGWNDPDMLEVGNGGMTKDEYIIHFSLWAISKAPLLLGCDVRNLTKDTMDIIGNKEVIAINQDPLGVQAKKVRTDVEIWTAPLSGYRFAVLIVNRDQWPANVTTHLEDFGIPPKTSVTARDLWEHKTLETPLAGNLSANLDPHTCKMYLLQPIS
******GLLGKLICVLLSCLMVMAAASSRATIMGKVSNTKFHHHSERLRRNLLANGLGKSPPMGWNSWNHFWCDINEDIVKAAADALVSSGLSKLGYEYVNIDDCWGEQVRDENGNLQAKNATFPSGIKALADYVHSKGLKLGMYSSAGYYTCSKQMPGSLGYEEQDAKTFALWGVDYLKYDNCYTDGSKPMDRYPIMTRALMKAGRPIYYSLCEWGDMHPALWGFQVGNSWRTTGDITDTFESVMSRADANEVYADYARPGGWNDPDMLEVGNGGMTKDEYIIHFSLWAISKAPLLLGCDVRNLTKDTMDIIGNKEVIAINQDPLGVQAKKVRTDVEIWTAPLSGYRFAVLIVNRDQWPANVTTHLEDFGIPPKTSVTARDLWEHKTLETPLAGNLSANLDPHTCKMYLL****
************ICVLLSCLMVMAAASSRATIMGKVSNTKF**********LLANGLGKSPPMGWNSWNHFWCDINEDIVKAAADALVSSGLSKLGYEYVNIDDCWGEQVRDENGNLQAKNATFPSGIKALADYVHSKGLKLGMYSSAGYYTCSKQMPGSLGYEEQDAKTFALWGVDYLKYDNCYTDGSKPMDRYPIMTRALMKAGRPIYYSLCEWGDMHPALWGFQVGNSWRTTGDITDTFESVMSRADANEVYADYARPGGWNDPDMLEVGNGGMTKDEYIIHFSLWAISKAPLLLGCDVRNLTKDTMDIIGNKEVIAINQDPLGVQAKKVRTDVEIWTAPLSGYRFAVLIVNRDQWPANVTTHLEDFGIPPKTSVTARDLWEHKTLETPLAGNLSANLDPHTCKMYLLQPIS
MGTRTEGLLGKLICVLLSCLMVMAAASSRATIMGKVSNTKFHHHSERLRRNLLANGLGKSPPMGWNSWNHFWCDINEDIVKAAADALVSSGLSKLGYEYVNIDDCWGEQVRDENGNLQAKNATFPSGIKALADYVHSKGLKLGMYSSAGYYTCSKQMPGSLGYEEQDAKTFALWGVDYLKYDNCYTDGSKPMDRYPIMTRALMKAGRPIYYSLCEWGDMHPALWGFQVGNSWRTTGDITDTFESVMSRADANEVYADYARPGGWNDPDMLEVGNGGMTKDEYIIHFSLWAISKAPLLLGCDVRNLTKDTMDIIGNKEVIAINQDPLGVQAKKVRTDVEIWTAPLSGYRFAVLIVNRDQWPANVTTHLEDFGIPPKTSVTARDLWEHKTLETPLAGNLSANLDPHTCKMYLLQPIS
*GTRTEGLLGKLICVLLSCLMVMAAASSRATIMGKVSNTKFHHHSERLRRNLLANGLGKSPPMGWNSWNHFWCDINEDIVKAAADALVSSGLSKLGYEYVNIDDCWGEQVRDENGNLQAKNATFPSGIKALADYVHSKGLKLGMYSSAGYYTCSKQMPGSLGYEEQDAKTFALWGVDYLKYDNCYTDGSKPMDRYPIMTRALMKAGRPIYYSLCEWGDMHPALWGFQVGNSWRTTGDITDTFESVMSRADANEVYADYARPGGWNDPDMLEVGNGGMTKDEYIIHFSLWAISKAPLLLGCDVRNLTKDTMDIIGNKEVIAINQDPLGVQAKKVRTDVEIWTAPLSGYRFAVLIVNRDQWPANVTTHLEDFGIPPKTSVTARDLWEHKTLETPLAGNLSANLDPHTCKMYLLQPIS
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGTRTEGLLGKLICVLLSCLMVMAAASSRATIMGKVSNTKFHHHSERLRRNLLANGLGKSPPMGWNSWNHFWCDINEDIVKAAADALVSSGLSKLGYEYVNIDDCWGEQVRDENGNLQAKNATFPSGIKALADYVHSKGLKLGMYSSAGYYTCSKQMPGSLGYEEQDAKTFALWGVDYLKYDNCYTDGSKPMDRYPIMTRALMKAGRPIYYSLCEWGDMHPALWGFQVGNSWRTTGDITDTFESVMSRADANEVYADYARPGGWNDPDMLEVGNGGMTKDEYIIHFSLWAISKAPLLLGCDVRNLTKDTMDIIGNKEVIAINQDPLGVQAKKVRTDVEIWTAPLSGYRFAVLIVNRDQWPANVTTHLEDFGIPPKTSVTARDLWEHKTLETPLAGNLSANLDPHTCKMYLLQPIS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query415 2.2.26 [Sep-21-2011]
P14749411 Alpha-galactosidase OS=Cy N/A no 0.971 0.980 0.570 1e-137
Q42656378 Alpha-galactosidase OS=Co N/A no 0.877 0.962 0.618 1e-137
Q9FXT4417 Alpha-galactosidase OS=Or yes no 0.865 0.860 0.595 1e-131
Q55B10385 Probable alpha-galactosid yes no 0.869 0.937 0.461 4e-91
B3PGJ1404 Alpha-galactosidase A OS= yes no 0.715 0.735 0.517 1e-83
Q9URZ0436 Alpha-galactosidase mel1 yes no 0.855 0.814 0.411 4e-75
A4DA70 648 Probable alpha-galactosid yes no 0.855 0.547 0.4 2e-72
B0YEK2 648 Probable alpha-galactosid N/A no 0.855 0.547 0.4 2e-72
Q9P4V4470 Alpha-galactosidase OS=Zy N/A no 0.828 0.731 0.409 2e-71
Q99172469 Alpha-galactosidase OS=Zy N/A no 0.720 0.637 0.417 2e-71
>sp|P14749|AGAL_CYATE Alpha-galactosidase OS=Cyamopsis tetragonoloba PE=1 SV=1 Back     alignment and function desciption
 Score =  489 bits (1259), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 234/410 (57%), Positives = 300/410 (73%), Gaps = 7/410 (1%)

Query: 8   LLGKLICVLLSCLMVMAAASSRATIMGKVSNTKFHHHSERLRRNLLANGLGKSPPMGWNS 67
           ++G +I V+L  LM++ +   R  ++ K + T        +RR L  NGLG++PPMGWNS
Sbjct: 7   IIGGMIIVVL--LMIIGSEGGR--LLEKKNRTSAEAEHYNVRRYLAENGLGQTPPMGWNS 62

Query: 68  WNHFWCDINEDIVKAAADALVSSGLSKLGYEYVNIDDCWGEQVRDENGNLQAKNATFPSG 127
           WNHF CDINE++V+  ADA+VS+GL+ LGY+Y+N+DDCW E  RD  GN+    A FPSG
Sbjct: 63  WNHFGCDINENVVRETADAMVSTGLAALGYQYINLDDCWAELNRDSEGNMVPNAAAFPSG 122

Query: 128 IKALADYVHSKGLKLGMYSSAGYYTCSKQMPGSLGYEEQDAKTFALWGVDYLKYDNCYTD 187
           IKALADYVHSKGLKLG+YS AG  TCSK+MPGSLG+EEQDAKTFA WGVDYLKYDNC   
Sbjct: 123 IKALADYVHSKGLKLGVYSDAGNQTCSKRMPGSLGHEEQDAKTFASWGVDYLKYDNCENL 182

Query: 188 GSKPMDRYPIMTRALMKAGRPIYYSLCEWGDMHPALWGFQVGNSWRTTGDITDTFESVMS 247
           G    +RYP M +AL+ +GRPI++S+CEWG   P +W   +GNSWRTTGDI D + S+ S
Sbjct: 183 GISVKERYPPMGKALLSSGRPIFFSMCEWGWEDPQIWAKSIGNSWRTTGDIEDNWNSMTS 242

Query: 248 RADANEVYADYARPGGWNDPDMLEVGNGGMTKDEYIIHFSLWAISKAPLLLGCDVRNLTK 307
            AD+N+ +A YA PGGWNDPDMLEVGNGGMT +EY  HFS+WA++KAPLL+GCD+R +  
Sbjct: 243 IADSNDKWASYAGPGGWNDPDMLEVGNGGMTTEEYRSHFSIWALAKAPLLVGCDIRAMDD 302

Query: 308 DTMDIIGNKEVIAINQDPLGVQAKKVRT--DVEIWTAPLSGYRFAVLIVNRDQWPANVTT 365
            T ++I N EVIA+NQD LGVQ KKV++  D+E+W  PLS  + AV++ NR    A VT 
Sbjct: 303 TTHELISNAEVIAVNQDKLGVQGKKVKSTNDLEVWAGPLSDNKVAVILWNRSSSRATVTA 362

Query: 366 HLEDFGIPPKTSVTARDLWEHKTLETPLAGNLSANLDPHTCKMYLLQPIS 415
              D G+   T+V ARDLWEH T ++ ++G +SA +D H CKMY+L P S
Sbjct: 363 SWSDIGLQQGTTVDARDLWEHST-QSLVSGEISAEIDSHACKMYVLTPRS 411
Involved in the hydrolysis of the galactomannan, it splits alpha-linked galactose moieties. It is particularly suitable for the hydrolysis of guar gum to a gum with improved gelling properties. Preferentially cleaves alpha-1,6 glycoside linkages.
Cyamopsis tetragonoloba (taxid: 3832)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 2
>sp|Q42656|AGAL_COFAR Alpha-galactosidase OS=Coffea arabica PE=1 SV=1 Back     alignment and function description
>sp|Q9FXT4|AGAL_ORYSJ Alpha-galactosidase OS=Oryza sativa subsp. japonica GN=Os10g0493600 PE=1 SV=1 Back     alignment and function description
>sp|Q55B10|AGAL_DICDI Probable alpha-galactosidase OS=Dictyostelium discoideum GN=melA PE=3 SV=1 Back     alignment and function description
>sp|B3PGJ1|AGAL_CELJU Alpha-galactosidase A OS=Cellvibrio japonicus (strain Ueda107) GN=agaA PE=1 SV=1 Back     alignment and function description
>sp|Q9URZ0|AGAL_SCHPO Alpha-galactosidase mel1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mel1 PE=3 SV=1 Back     alignment and function description
>sp|A4DA70|AGALD_ASPFU Probable alpha-galactosidase D OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=aglD PE=3 SV=2 Back     alignment and function description
>sp|B0YEK2|AGALD_ASPFC Probable alpha-galactosidase D OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=aglD PE=3 SV=2 Back     alignment and function description
>sp|Q9P4V4|MEL_ZYGMR Alpha-galactosidase OS=Zygosaccharomyces mrakii GN=MEL PE=3 SV=1 Back     alignment and function description
>sp|Q99172|MEL_ZYGCI Alpha-galactosidase OS=Zygosaccharomyces cidri GN=MEL PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query415
356568242410 PREDICTED: alpha-galactosidase-like [Gly 0.908 0.919 0.736 1e-171
356532145410 PREDICTED: alpha-galactosidase-like [Gly 0.908 0.919 0.733 1e-170
255544191412 alpha-galactosidase/alpha-n-acetylgalact 0.949 0.956 0.707 1e-170
53747927405 alpha-galactosidase 1 [Pisum sativum] 0.968 0.992 0.681 1e-169
30016922410 alpha-galactosidase [Carica papaya] 0.959 0.970 0.696 1e-167
225463807408 PREDICTED: alpha-galactosidase [Vitis vi 0.891 0.906 0.744 1e-167
449458720413 PREDICTED: alpha-galactosidase-like [Cuc 0.963 0.968 0.677 1e-166
224113219369 predicted protein [Populus trichocarpa] 0.884 0.994 0.742 1e-166
15241601410 alpha-galactosidase 1 [Arabidopsis thali 0.983 0.995 0.659 1e-164
20260602410 alpha-galactosidase-like protein [Arabid 0.983 0.995 0.657 1e-164
>gi|356568242|ref|XP_003552322.1| PREDICTED: alpha-galactosidase-like [Glycine max] Back     alignment and taxonomy information
 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 279/379 (73%), Positives = 324/379 (85%), Gaps = 2/379 (0%)

Query: 39  TKFHHHSERLRRNLLANGLGKSPPMGWNSWNHFWCDINEDIVKAAADALVSSGLSKLGYE 98
           TK HH  E+ RRNLLANGLG++PPMGWNSWNHF C INE +++  ADALVS+GLSKLGY 
Sbjct: 32  TKLHHRVEQFRRNLLANGLGRTPPMGWNSWNHFSCQINEKMIRETADALVSTGLSKLGYT 91

Query: 99  YVNIDDCWGEQVRDENGNLQAKNATFPSGIKALADYVHSKGLKLGMYSSAGYYTCSKQMP 158
           YVNIDDCW E  RD  GNL AKN+TFPSGIKALADYVH KGLKLG+YS AGY+TCSKQMP
Sbjct: 92  YVNIDDCWAELNRDAKGNLVAKNSTFPSGIKALADYVHGKGLKLGIYSDAGYFTCSKQMP 151

Query: 159 GSLGYEEQDAKTFALWGVDYLKYDNCYTDGSKPMDRYPIMTRALMKAGRPIYYSLCEWGD 218
           GSLG+E QDAKTFA WG+DYLKYDNC  DGSKP DRYPIMTRALM AGRPI++SLCEWGD
Sbjct: 152 GSLGHEFQDAKTFASWGIDYLKYDNCNNDGSKPTDRYPIMTRALMMAGRPIFFSLCEWGD 211

Query: 219 MHPALWGFQVGNSWRTTGDITDTFESVMSRADANEVYADYARPGGWNDPDMLEVGNGGMT 278
           +HPALWG +VGNSWRTT DI D++ES++SRAD NEVYA+YARPGGWNDPDMLEVGNGGMT
Sbjct: 212 LHPALWGAKVGNSWRTTNDINDSWESMVSRADMNEVYAEYARPGGWNDPDMLEVGNGGMT 271

Query: 279 KDEYIIHFSLWAISKAPLLLGCDVRNLTKDTMDIIGNKEVIAINQDPLGVQAKKVRT--D 336
           K+EYI+HFSLWA+SKAPLLLGCDVRN+TK+TM+I+ NKEVI++NQDPLGVQ KKVR   D
Sbjct: 272 KNEYIVHFSLWALSKAPLLLGCDVRNMTKETMEIVANKEVISVNQDPLGVQGKKVRMEGD 331

Query: 337 VEIWTAPLSGYRFAVLIVNRDQWPANVTTHLEDFGIPPKTSVTARDLWEHKTLETPLAGN 396
            EIW  PLSGYR AV+++NR     ++T + +D  IPPK++V ARDLWEHKTL  P    
Sbjct: 332 QEIWAGPLSGYRVAVVLLNRGPSKISITANWDDIDIPPKSAVEARDLWEHKTLMRPFVDK 391

Query: 397 LSANLDPHTCKMYLLQPIS 415
           L+A +DPH CKMY+L+P++
Sbjct: 392 LTATVDPHGCKMYVLKPVA 410

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356532145|ref|XP_003534634.1| PREDICTED: alpha-galactosidase-like [Glycine max] Back     alignment and taxonomy information
>gi|255544191|ref|XP_002513158.1| alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] gi|223548169|gb|EEF49661.1| alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|53747927|emb|CAF34023.1| alpha-galactosidase 1 [Pisum sativum] Back     alignment and taxonomy information
>gi|30016922|gb|AAP04002.1| alpha-galactosidase [Carica papaya] Back     alignment and taxonomy information
>gi|225463807|ref|XP_002270791.1| PREDICTED: alpha-galactosidase [Vitis vinifera] gi|297742709|emb|CBI35343.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449458720|ref|XP_004147095.1| PREDICTED: alpha-galactosidase-like [Cucumis sativus] gi|449503497|ref|XP_004162032.1| PREDICTED: alpha-galactosidase-like [Cucumis sativus] gi|84310212|gb|ABC55266.1| acid alpha galactosidase 1 [Cucumis sativus] Back     alignment and taxonomy information
>gi|224113219|ref|XP_002316426.1| predicted protein [Populus trichocarpa] gi|222865466|gb|EEF02597.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15241601|ref|NP_196455.1| alpha-galactosidase 1 [Arabidopsis thaliana] gi|10178280|emb|CAC08338.1| alpha-galactosidase-like protein [Arabidopsis thaliana] gi|332003909|gb|AED91292.1| alpha-galactosidase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|20260602|gb|AAM13199.1| alpha-galactosidase-like protein [Arabidopsis thaliana] gi|30725668|gb|AAP37856.1| At5g08380 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query415
TAIR|locus:2150778410 AGAL1 "alpha-galactosidase 1" 0.956 0.968 0.652 1.3e-148
TAIR|locus:2150763396 AGAL2 "alpha-galactosidase 2" 0.845 0.886 0.615 1.1e-124
UNIPROTKB|Q9FXT4417 LOC_Os10g35110 "Alpha-galactos 0.850 0.846 0.593 9.5e-121
TAIR|locus:2078416437 AT3G56310 [Arabidopsis thalian 0.853 0.810 0.577 8.2e-115
UNIPROTKB|Q7XIV4425 OJ1409_C08.26 "Os07g0679300 pr 0.850 0.830 0.579 3.5e-114
UNIPROTKB|Q23YJ0382 TTHERM_01181990 "Melibiase fam 0.840 0.913 0.529 2.6e-102
UNIPROTKB|Q23DW6381 TTHERM_00043770 "Alpha-galacto 0.840 0.916 0.512 1.9e-99
UNIPROTKB|Q9S2C9 680 Q9S2C9 "Probable secreted alph 0.824 0.502 0.490 8.6e-88
DICTYBASE|DDB_G0271490385 melA "putative alpha-galactosi 0.848 0.914 0.459 8.9e-86
UNIPROTKB|B3PGJ1404 agaA "Alpha-galactosidase A" [ 0.708 0.727 0.522 6.6e-81
TAIR|locus:2150778 AGAL1 "alpha-galactosidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1451 (515.8 bits), Expect = 1.3e-148, P = 1.3e-148
 Identities = 265/406 (65%), Positives = 321/406 (79%)

Query:    12 LICVLLSCLMVMAAASSRATIMGKVSNTKFHHHSEXXXXXXXXXXXXKSPPMGWNSWNHF 71
             ++ +L+S +++    SSR+     V+N   H  SE             +PPMGWNSWNHF
Sbjct:    12 ILMILISSMVMTMVESSRS-----VNNG--HDDSEILRRHLLTNGLGVTPPMGWNSWNHF 64

Query:    72 WCDINEDIVKAAADALVSSGLSKLGYEYVNIDDCWGEQVRDENGNLQAKNATFPSGIKAL 131
              C+I+E ++K  ADALV++GLSKLGY YVNIDDCW E  RD  G+L  K +TFPSGIKA+
Sbjct:    65 SCNIDEKMIKETADALVTTGLSKLGYNYVNIDDCWAEISRDSKGSLVPKKSTFPSGIKAV 124

Query:   132 ADYVHSKGLKLGMYSSAGYYTCSKQMPGSLGYEEQDAKTFALWGVDYLKYDNCYTDGSKP 191
             ADYVHSKGLKLG+YS AGY+TCSK MPGSLGYEE DAKTFA WG+DYLKYDNC +DGSKP
Sbjct:   125 ADYVHSKGLKLGIYSDAGYFTCSKTMPGSLGYEEHDAKTFAEWGIDYLKYDNCNSDGSKP 184

Query:   192 MDRYPIMTRALMKAGRPIYYSLCEWGDMHPALWGFQVGNSWRTTGDITDTFESVMSRADA 251
               RYP+MTRALMK+GRPI++SLCEWGDMHPALWG  VGNSWRTT DI DT+ S++S AD 
Sbjct:   185 TVRYPVMTRALMKSGRPIFHSLCEWGDMHPALWGSPVGNSWRTTNDIKDTWLSMISIADM 244

Query:   252 NEVYADYARPGGWNDPDMLEVGNGGMTKDEYIIHFSLWAISKAPLLLGCDVRNLTKDTMD 311
             NEVYA++ARPGGWNDPDMLEVGNGGMTKDEYI+HFS+WAISKAPLLLGCD+RN+TK+TM+
Sbjct:   245 NEVYAEHARPGGWNDPDMLEVGNGGMTKDEYIVHFSIWAISKAPLLLGCDIRNMTKETME 304

Query:   312 IIGNKEVIAINQDPLGVQAKKVRT--DVEIWTAPLSGYRFAVLIVNRDQWPANVTTHLED 369
             I+ NKEVIAINQDP GVQAKKVR   D+E+W  PLSGYR A+L++NR     ++T   ED
Sbjct:   305 IVANKEVIAINQDPHGVQAKKVRMEGDLEVWAGPLSGYRVALLLLNRGPSRTSITALWED 364

Query:   370 FGIPPKTSVTARDLWEHKTLETPLAGNLSANLDPHTCKMYLLQPIS 415
               IP  + V ARDLWEH+TL+    GNL+A +D H CK+Y+L+P++
Sbjct:   365 IEIPANSIVEARDLWEHQTLKQKFVGNLTATVDSHACKLYVLKPVA 410
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0004557 "alpha-galactosidase activity" evidence=ISS;IBA
GO:0005576 "extracellular region" evidence=ISM
GO:0005737 "cytoplasm" evidence=IBA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0009311 "oligosaccharide metabolic process" evidence=IBA
GO:0016139 "glycoside catabolic process" evidence=IBA
GO:0046477 "glycosylceramide catabolic process" evidence=IBA
GO:0005618 "cell wall" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
TAIR|locus:2150763 AGAL2 "alpha-galactosidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9FXT4 LOC_Os10g35110 "Alpha-galactosidase" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2078416 AT3G56310 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q7XIV4 OJ1409_C08.26 "Os07g0679300 protein" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q23YJ0 TTHERM_01181990 "Melibiase family protein" [Tetrahymena thermophila SB210 (taxid:312017)] Back     alignment and assigned GO terms
UNIPROTKB|Q23DW6 TTHERM_00043770 "Alpha-galactosidase, putative" [Tetrahymena thermophila SB210 (taxid:312017)] Back     alignment and assigned GO terms
UNIPROTKB|Q9S2C9 Q9S2C9 "Probable secreted alpha-galactosidase" [Streptomyces coelicolor A3(2) (taxid:100226)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0271490 melA "putative alpha-galactosidase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|B3PGJ1 agaA "Alpha-galactosidase A" [Cellvibrio japonicus Ueda107 (taxid:498211)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
B3PGJ1AGAL_CELJU3, ., 2, ., 1, ., 2, 20.51750.71560.7351yesno
Q42656AGAL_COFAR3, ., 2, ., 1, ., 2, 20.61850.87710.9629N/Ano
Q55B10AGAL_DICDI3, ., 2, ., 1, ., 2, 20.46190.86980.9376yesno
Q90744NAGAB_CHICK3, ., 2, ., 1, ., 4, 90.39170.86500.8864yesno
Q66H12NAGAB_RAT3, ., 2, ., 1, ., 4, 90.35980.86980.8698yesno
Q9URZ0AGAL_SCHPO3, ., 2, ., 1, ., 2, 20.41160.85540.8142yesno
Q9FXT4AGAL_ORYSJ3, ., 2, ., 1, ., 2, 20.59500.86500.8609yesno
P14749AGAL_CYATE3, ., 2, ., 1, ., 2, 20.57070.97100.9805N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.220.946
3rd Layer3.2.10.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00002617001
SubName- Full=Chromosome undetermined scaffold_133, whole genome shotgun sequence; (408 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00034182001
RecName- Full=Beta-galactosidase; EC=3.2.1.23; (641 aa)
     •  0.912
GSVIVG00029420001
SubName- Full=Chromosome chr13 scaffold_48, whole genome shotgun sequence; (427 aa)
  •  • •0.902
GSVIVG00002619001
SubName- Full=Chromosome undetermined scaffold_133, whole genome shotgun sequence; (405 aa)
  •  • •0.902
GSVIVG00011770001
SubName- Full=Chromosome undetermined scaffold_337, whole genome shotgun sequence; (405 aa)
  •  • •0.902
GSVIVG00002618001
SubName- Full=Chromosome undetermined scaffold_133, whole genome shotgun sequence; (410 aa)
  •  • •0.902
CWINV
SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (575 aa)
     •  0.899
GSVIVG00033170001
SubName- Full=Chromosome chr5 scaffold_64, whole genome shotgun sequence; (426 aa)
     •  0.899
GSVIVG00032804001
SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (525 aa)
     •  0.899
GSVIVG00032196001
SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (563 aa)
     •  0.899
GSVIVG00030925001
SubName- Full=Chromosome undetermined scaffold_53, whole genome shotgun sequence; (133 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query415
PLN02692412 PLN02692, PLN02692, alpha-galactosidase 0.0
PLN02808386 PLN02808, PLN02808, alpha-galactosidase 0.0
PLN02229427 PLN02229, PLN02229, alpha-galactosidase 1e-172
pfam02065395 pfam02065, Melibiase, Melibiase 1e-27
PLN03231357 PLN03231, PLN03231, putative alpha-galactosidase; 1e-25
PLN02899 633 PLN02899, PLN02899, alpha-galactosidase 2e-24
COG3345687 COG3345, GalA, Alpha-galactosidase [Carbohydrate t 8e-09
>gnl|CDD|178295 PLN02692, PLN02692, alpha-galactosidase Back     alignment and domain information 
 Score =  656 bits (1694), Expect = 0.0
 Identities = 291/414 (70%), Positives = 340/414 (82%), Gaps = 6/414 (1%)

Query: 4   RTEGLLGKLICVLLSCLMVMAAASSRATIMGKVSNTKFHHHSERLRRNLLANGLGKSPPM 63
           R   ++   + ++L  +MVM    S  +    V+N +F   SE LRRNLLANGLG +PPM
Sbjct: 3   RRAMVIKMALLLILISVMVMVMVESSRS----VNNKEFDDDSEILRRNLLANGLGITPPM 58

Query: 64  GWNSWNHFWCDINEDIVKAAADALVSSGLSKLGYEYVNIDDCWGEQVRDENGNLQAKNAT 123
           GWNSWNHF C I+E ++K  ADALVS+GLSKLGY YVNIDDCW E  RDE GNL  K +T
Sbjct: 59  GWNSWNHFSCKIDEKMIKETADALVSTGLSKLGYTYVNIDDCWAEIARDEKGNLVPKKST 118

Query: 124 FPSGIKALADYVHSKGLKLGMYSSAGYYTCSKQMPGSLGYEEQDAKTFALWGVDYLKYDN 183
           FPSGIKALADYVHSKGLKLG+YS AGY+TCSK MPGSLG+EEQDAKTFA WG+DYLKYDN
Sbjct: 119 FPSGIKALADYVHSKGLKLGIYSDAGYFTCSKTMPGSLGHEEQDAKTFASWGIDYLKYDN 178

Query: 184 CYTDGSKPMDRYPIMTRALMKAGRPIYYSLCEWGDMHPALWGFQVGNSWRTTGDITDTFE 243
           C  DGSKP  RYP+MTRALMKAGRPI++SLCEWGDMHPALWG +VGNSWRTT DI+DT++
Sbjct: 179 CNNDGSKPTVRYPVMTRALMKAGRPIFFSLCEWGDMHPALWGSKVGNSWRTTNDISDTWD 238

Query: 244 SVMSRADANEVYADYARPGGWNDPDMLEVGNGGMTKDEYIIHFSLWAISKAPLLLGCDVR 303
           S++SRAD NEVYA+ ARPGGWNDPDMLEVGNGGMTKDEYI+HFS+WAISKAPLLLGCDVR
Sbjct: 239 SMISRADMNEVYAELARPGGWNDPDMLEVGNGGMTKDEYIVHFSIWAISKAPLLLGCDVR 298

Query: 304 NLTKDTMDIIGNKEVIAINQDPLGVQAKKVRT--DVEIWTAPLSGYRFAVLIVNRDQWPA 361
           N+TK+TMDI+ NKEVIA+NQDPLGVQAKKVR   D+EIW  PLSGYR A+L++NR  W  
Sbjct: 299 NMTKETMDIVANKEVIAVNQDPLGVQAKKVRMEGDLEIWAGPLSGYRVALLLLNRGPWRN 358

Query: 362 NVTTHLEDFGIPPKTSVTARDLWEHKTLETPLAGNLSANLDPHTCKMYLLQPIS 415
           ++T + +D GIP  + V ARDLWEHKTL+    GNL+A +D H CKMY+L+PIS
Sbjct: 359 SITANWDDIGIPANSIVEARDLWEHKTLKQHFVGNLTATVDSHACKMYILKPIS 412

Length = 412
>gnl|CDD|166449 PLN02808, PLN02808, alpha-galactosidase Back     alignment and domain information
>gnl|CDD|177874 PLN02229, PLN02229, alpha-galactosidase Back     alignment and domain information
>gnl|CDD|216861 pfam02065, Melibiase, Melibiase Back     alignment and domain information
>gnl|CDD|178770 PLN03231, PLN03231, putative alpha-galactosidase; Provisional Back     alignment and domain information
>gnl|CDD|178487 PLN02899, PLN02899, alpha-galactosidase Back     alignment and domain information
>gnl|CDD|225882 COG3345, GalA, Alpha-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 415
PLN02692412 alpha-galactosidase 100.0
PLN02229427 alpha-galactosidase 100.0
PLN02808386 alpha-galactosidase 100.0
KOG2366414 consensus Alpha-D-galactosidase (melibiase) [Carbo 100.0
PLN02899633 alpha-galactosidase 100.0
PLN03231357 putative alpha-galactosidase; Provisional 100.0
PF02065394 Melibiase: Melibiase; InterPro: IPR000111 O-Glycos 100.0
PLN02219 775 probable galactinol--sucrose galactosyltransferase 100.0
PLN02355758 probable galactinol--sucrose galactosyltransferase 99.97
PLN02711777 Probable galactinol--sucrose galactosyltransferase 99.97
PLN02684750 Probable galactinol--sucrose galactosyltransferase 99.97
PF05691747 Raffinose_syn: Raffinose synthase or seed imbibiti 99.96
COG3345687 GalA Alpha-galactosidase [Carbohydrate transport a 99.93
PLN02982865 galactinol-raffinose galactosyltransferase/ghydrol 99.93
cd06592303 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact 99.75
PF10566273 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: 99.58
cd06593308 GH31_xylosidase_YicI YicI alpha-xylosidase is a gl 99.45
cd06589265 GH31 The enzymes of glycosyl hydrolase family 31 ( 99.32
cd06599317 GH31_glycosidase_Aec37 Glycosyl hydrolase family 3 99.16
PRK10658665 putative alpha-glucosidase; Provisional 99.1
cd06598317 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide 99.09
PF01055441 Glyco_hydro_31: Glycosyl hydrolases family 31 ; In 99.09
cd06604339 GH31_glucosidase_II_MalA Alpha-glucosidase II (alp 99.08
cd06595292 GH31_xylosidase_XylS-like This family represents a 99.08
cd06601332 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) 99.04
cd06600317 GH31_MGAM-like This family includes the following 99.0
cd06591319 GH31_xylosidase_XylS XylS is a glycosyl hydrolase 98.99
cd06602339 GH31_MGAM_SI_GAA This family includes the followin 98.97
cd06597340 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide 98.97
cd06594317 GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl 98.97
COG1501 772 Alpha-glucosidases, family 31 of glycosyl hydrolas 98.8
cd06603339 GH31_GANC_GANAB_alpha This family includes the clo 98.79
PRK10426635 alpha-glucosidase; Provisional 98.66
PLN02763 978 hydrolase, hydrolyzing O-glycosyl compounds 98.55
KOG1065 805 consensus Maltase glucoamylase and related hydrola 97.79
TIGR02456539 treS_nterm trehalose synthase. Trehalose synthase 97.09
cd06596261 GH31_CPE1046 CPE1046 is an uncharacterized Clostri 96.9
PRK10785598 maltodextrin glucosidase; Provisional 96.23
PRK09441479 cytoplasmic alpha-amylase; Reviewed 96.12
PF14509103 GH97_C: Glycosyl-hydrolase 97 C-terminal, oligomer 96.1
TIGR01515613 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 95.04
PF0853358 Glyco_hydro_42C: Beta-galactosidase C-terminal dom 94.49
PF01120346 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00 93.52
PF0280695 Alpha-amylase_C: Alpha amylase, C-terminal all-bet 93.18
PF13200316 DUF4015: Putative glycosyl hydrolase domain 93.18
TIGR02402542 trehalose_TreZ malto-oligosyltrehalose trehalohydr 91.3
PF1043878 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal 90.9
PRK12313633 glycogen branching enzyme; Provisional 90.59
smart00812384 Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydro 90.42
PRK147051224 glycogen branching enzyme; Provisional 86.86
PRK05402726 glycogen branching enzyme; Provisional 86.62
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 86.57
KOG1066 915 consensus Glucosidase II catalytic (alpha) subunit 86.55
PRK14706639 glycogen branching enzyme; Provisional 85.46
COG0296628 GlgB 1,4-alpha-glucan branching enzyme [Carbohydra 84.89
TIGR02104605 pulA_typeI pullulanase, type I. Pullulan is an unu 84.24
TIGR02455688 TreS_stutzeri trehalose synthase, Pseudomonas stut 83.83
PLN02960 897 alpha-amylase 83.72
PRK12568730 glycogen branching enzyme; Provisional 82.24
cd00598210 GH18_chitinase-like The GH18 (glycosyl hydrolase, 81.2
PLN02361401 alpha-amylase 80.76
PF14488166 DUF4434: Domain of unknown function (DUF4434) 80.62
PRK10933 551 trehalose-6-phosphate hydrolase; Provisional 80.37
>PLN02692 alpha-galactosidase Back     alignment and domain information 
Probab=100.00  E-value=8.4e-101  Score=764.20  Aligned_cols=398  Identities=73%  Similarity=1.277  Sum_probs=366.6

Q ss_pred             HHHHHHHHHHhhccccccccCccccccccccchhhhhhhccCCCCCCCceEEecccccCCCCCHHHHHHHHHHHHHcCCc
Q 014963           14 CVLLSCLMVMAAASSRATIMGKVSNTKFHHHSERLRRNLLANGLGKSPPMGWNSWNHFWCDINEDIVKAAADALVSSGLS   93 (415)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~GWnsW~~~~~~i~e~~i~~~ad~l~~~gl~   93 (415)
                      .++|+.+||+.+.-+.    -++.+-..-..+++.+..+++|+++++||||||||+.|+|+|||+.++++||++++.||+
T Consensus        13 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ngla~tPpmGWnSW~~~~~~i~E~~i~~~ad~~~~~gl~   88 (412)
T PLN02692         13 LLILISVMVMVMVESS----RSVNNKEFDDDSEILRRNLLANGLGITPPMGWNSWNHFSCKIDEKMIKETADALVSTGLS   88 (412)
T ss_pred             HHHHHHHHHhhccccc----cccccccccchhhhhhhhcccCcCcCCCcceEEchhhhCcccCHHHHHHHHHHHHhccch
Confidence            3444555555433221    223333344455788899999999999999999999999999999999999999999999


Q ss_pred             ccCceEEEeCCCccccCCCCCCCeeecCCCCCCcHHHHHHHHHHcCCeEEEEeeCCcccccCCCCChhHHHHHHHHHHHH
Q 014963           94 KLGYEYVNIDDCWGEQVRDENGNLQAKNATFPSGIKALADYVHSKGLKLGMYSSAGYYTCSKQMPGSLGYEEQDAKTFAL  173 (415)
Q Consensus        94 ~~G~~~~~IDdGW~~~~~d~~G~~~~~~~~FP~Gl~~l~~~i~~~Glk~Giw~~pg~~~c~~~~pg~~~~~~~~~~~~~~  173 (415)
                      ++||+||+|||||+...||+.|+|++|++|||+|||+|+||||+||||||||.++|..+|....||+++|++.++++|++
T Consensus        89 ~~Gy~yv~iDDgW~~~~rd~~G~~~~d~~kFP~G~k~ladyiH~~GLKfGIy~d~G~~tC~~~~pGS~g~e~~DA~~fA~  168 (412)
T PLN02692         89 KLGYTYVNIDDCWAEIARDEKGNLVPKKSTFPSGIKALADYVHSKGLKLGIYSDAGYFTCSKTMPGSLGHEEQDAKTFAS  168 (412)
T ss_pred             hcCcEEEEEcCCcCCCCCCCCCCeeeChhhcCCcHHHHHHHHHHCCCceEEEecCCccccCCCCCCchHHHHHHHHHHHh
Confidence            99999999999999998999999999999999999999999999999999999999999988779999999999999999


Q ss_pred             cCCcEEEeecCCCCCCCccchHHHHHHHHHHcCCCEEEEecCCCCCCcCcccccccceEeecCCCCCchhhHHHHHHHhh
Q 014963          174 WGVDYLKYDNCYTDGSKPMDRYPIMTRALMKAGRPIYYSLCEWGDMHPALWGFQVGNSWRTTGDITDTFESVMSRADANE  253 (415)
Q Consensus       174 wGvdyiK~D~~~~~~~~~~~~y~~~~~al~~~g~~i~~~~c~~g~~~p~~~~~~~~~~~R~s~D~~~~w~~~~~~~~~~~  253 (415)
                      |||||||+|+|+.....+.++|..|.+||+++||+|+|++|+||...|+.|..+++|+||++.|+.+.|.++.++++.+.
T Consensus       169 WGvDylK~D~C~~~~~~~~~~y~~m~~AL~~tGRpI~~SlC~wg~~~p~~w~~~~~n~WR~s~DI~d~W~sv~~~~~~~~  248 (412)
T PLN02692        169 WGIDYLKYDNCNNDGSKPTVRYPVMTRALMKAGRPIFFSLCEWGDMHPALWGSKVGNSWRTTNDISDTWDSMISRADMNE  248 (412)
T ss_pred             cCCCEEeccccCCCCcchhHHHHHHHHHHHHhCCCeEEEecCCCcCChhhhhhhcCCccccccccccchHhHHHHHHHHH
Confidence            99999999999876666678999999999999999999999999888999999999999999999999999999999888


Q ss_pred             hhhhccCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHcCccccccCCCCCChhhhhhccChhhhhhccCCCccccEEe
Q 014963          254 VYADYARPGGWNDPDMLEVGNGGMTKDEYIIHFSLWAISKAPLLLGCDVRNLTKDTMDIIGNKEVIAINQDPLGVQAKKV  333 (415)
Q Consensus       254 ~~~~~~~~~~~~DpD~l~vg~~~lt~~E~r~~~~~~a~~gspL~is~Dl~~l~~~~~~ll~N~~~lai~qd~lG~~~~~~  333 (415)
                      .++.+++|++|||||||+||+.++|.+|+|+||++|||++|||++|+||++++++.+++|+|+|+||||||++|++++++
T Consensus       249 ~~~~~agPG~wnDpDML~VGn~glT~~E~rThfsLWai~~SPLiiG~DL~~~~~~~l~iLtN~evIAiNQD~lG~q~~~v  328 (412)
T PLN02692        249 VYAELARPGGWNDPDMLEVGNGGMTKDEYIVHFSIWAISKAPLLLGCDVRNMTKETMDIVANKEVIAVNQDPLGVQAKKV  328 (412)
T ss_pred             HHhhccCCCCCCCCCeEeECCCCCCHHHHHHHHHHHHHHhCcceecCCcccCCHHHHHHhcCHHHhhhccCccccCcEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ec--CceEEEEEcCCCcEEEEEEecCCCCeeEEeeccccCCCCCCeEEEEEecCCcccccccCceEEEEECCCcEEEEEE
Q 014963          334 RT--DVEIWTAPLSGYRFAVLIVNRDQWPANVTTHLEDFGIPPKTSVTARDLWEHKTLETPLAGNLSANLDPHTCKMYLL  411 (415)
Q Consensus       334 ~~--d~~vw~~~l~~g~~~Va~fN~~~~~~~~~i~l~~lGL~~~~~~~v~Dlw~g~~l~~~~~~~l~~~l~ph~~~ll~l  411 (415)
                      ..  +.++|.+++++|+++|++||+++.++++++++++||+.....++|||||++++++..+++.++++|+||||+||||
T Consensus       329 ~~~~~~~vW~k~l~~g~~aVal~N~~~~~~~i~~~~~~lgl~~~~~~~vrDLW~~~~~g~~~~~~~~~~v~~Hg~~l~rl  408 (412)
T PLN02692        329 RMEGDLEIWAGPLSGYRVALLLLNRGPWRNSITANWDDIGIPANSIVEARDLWEHKTLKQHFVGNLTATVDSHACKMYIL  408 (412)
T ss_pred             EecCCeEEEEEECCCCCEEEEEEECCCCCEEEEEeHHHhCCCCCCceEEEECCCCCccCccccceEEEEECCceEEEEEE
Confidence            77  6899999999999999999999999999999999999876679999999999984357889999999999999999


Q ss_pred             EeCC
Q 014963          412 QPIS  415 (415)
Q Consensus       412 ~p~~  415 (415)
                      +|++
T Consensus       409 ~~~~  412 (412)
T PLN02692        409 KPIS  412 (412)
T ss_pred             ecCC
Confidence            9975

>PLN02229 alpha-galactosidase Back     alignment and domain information
>PLN02808 alpha-galactosidase Back     alignment and domain information
>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02899 alpha-galactosidase Back     alignment and domain information
>PLN03231 putative alpha-galactosidase; Provisional Back     alignment and domain information
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN02219 probable galactinol--sucrose galactosyltransferase 2 Back     alignment and domain information
>PLN02355 probable galactinol--sucrose galactosyltransferase 1 Back     alignment and domain information
>PLN02711 Probable galactinol--sucrose galactosyltransferase Back     alignment and domain information
>PLN02684 Probable galactinol--sucrose galactosyltransferase Back     alignment and domain information
>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins Back     alignment and domain information
>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase Back     alignment and domain information
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose Back     alignment and domain information
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase Back     alignment and domain information
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 Back     alignment and domain information
>PRK10658 putative alpha-glucosidase; Provisional Back     alignment and domain information
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY Back     alignment and domain information
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities Back     alignment and domain information
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus Back     alignment and domain information
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end Back     alignment and domain information
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II Back     alignment and domain information
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate Back     alignment and domain information
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase Back     alignment and domain information
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ Back     alignment and domain information
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride Back     alignment and domain information
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) Back     alignment and domain information
>PRK10426 alpha-glucosidase; Provisional Back     alignment and domain information
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02456 treS_nterm trehalose synthase Back     alignment and domain information
>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain Back     alignment and domain information
>PRK10785 maltodextrin glucosidase; Provisional Back     alignment and domain information
>PRK09441 cytoplasmic alpha-amylase; Reviewed Back     alignment and domain information
>PF14509 GH97_C: Glycosyl-hydrolase 97 C-terminal, oligomerisation; PDB: 3A24_A 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A Back     alignment and domain information
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>PF08533 Glyco_hydro_42C: Beta-galactosidase C-terminal domain; InterPro: IPR013739 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF02806 Alpha-amylase_C: Alpha amylase, C-terminal all-beta domain; InterPro: IPR006048 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF13200 DUF4015: Putative glycosyl hydrolase domain Back     alignment and domain information
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>PF10438 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal domain; InterPro: IPR019492 This domain is at the very C terminus of cyclo-malto-dextrinase proteins and consists of 8 beta strands, is largely globular and appears to help stabilise the active sites created by upstream domains, IPR015171 from INTERPRO, and IPR006047 from INTERPRO Back     alignment and domain information
>PRK12313 glycogen branching enzyme; Provisional Back     alignment and domain information
>smart00812 Alpha_L_fucos Alpha-L-fucosidase Back     alignment and domain information
>PRK14705 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>KOG1066 consensus Glucosidase II catalytic (alpha) subunit and related enzymes, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14706 glycogen branching enzyme; Provisional Back     alignment and domain information
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02104 pulA_typeI pullulanase, type I Back     alignment and domain information
>TIGR02455 TreS_stutzeri trehalose synthase, Pseudomonas stutzeri type Back     alignment and domain information
>PLN02960 alpha-amylase Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods Back     alignment and domain information
>PLN02361 alpha-amylase Back     alignment and domain information
>PF14488 DUF4434: Domain of unknown function (DUF4434) Back     alignment and domain information
>PRK10933 trehalose-6-phosphate hydrolase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query415
1uas_A362 Crystal Structure Of Rice Alpha-Galactosidase Lengt 1e-129
3a5v_A397 Crystal Structure Of Alpha-Galactosidase I From Mor 4e-79
1ktb_A405 The Structure Of Alpha-N-Acetylgalactosaminidase Le 4e-70
3lx9_A404 Interconversion Of Human Lysosomal Enzyme Specifici 1e-67
1r46_A398 Structure Of Human Alpha-galactosidase Length = 398 1e-67
3hg3_A404 Human Alpha-Galactosidase Catalytic Mechanism 2. Su 9e-67
3lrk_A479 Structure Of Alfa-Galactosidase (Mel1) From Sacchar 1e-65
3lrm_A479 Structure Of Alfa-Galactosidase From Saccharomyces 7e-65
3h53_A400 Crystal Structure Of Human Alpha-N-Acetylgalactosam 7e-58
3a21_A 614 Crystal Structure Of Streptomyces Avermitilis Beta- 1e-57
1szn_A417 The Structure Of Alpha-Galactosidase Length = 417 1e-57
3cc1_A433 Crystal Structure Of A Putative Alpha-N-Acetylgalac 5e-22
2xn2_A732 Structure Of Alpha-Galactosidase From Lactobacillus 7e-08
2xn0_A732 Structure Of Alpha-Galactosidase From Lactobacillus 7e-08
>pdb|1UAS|A Chain A, Crystal Structure Of Rice Alpha-Galactosidase Length = 362 Back     alignment and structure 
Iteration: 1

 Score =  458 bits (1179), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 212/357 (59%), Positives = 267/357 (74%), Gaps = 4/357 (1%)
Query: 59  KSPPMGWNSWNHFWCDINEDIVKAAADALVSSGLSKLGYEYVNIDDCWGEQVRDENGNLQ 118
           ++P MGWNSWNHF+C INE I++  ADALV++GL+KLGY+YVNIDDCW E  RD  GN  
Sbjct: 7   RTPQMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFV 66
Query: 119 AKNATFPSGIKALADYVHSKGLKLGMYSSAGYYTCSKQMPGSLGYEEQDAKTFALWGVDY 178
               TFPSGIKALADYVH+KGLKLG+YS AG  TCS +MPGSL +EEQD KTFA WGVDY
Sbjct: 67  PNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFASWGVDY 126
Query: 179 LKYDNCYTDGSKPMDRYPIMTRALMKAGRPIYYSLCEWGDMHPALWGFQVGNSWRTTGDI 238
           LKYDNC   G   M+RY  M+ A+   G+ I++SLCEWG  +PA W  ++GNSWRTTGDI
Sbjct: 127 LKYDNCNDAGRSVMERYTRMSNAMKTYGKNIFFSLCEWGKENPATWAGRMGNSWRTTGDI 186
Query: 239 TDTFESVMSRADANEVYADYARPGGWNDPDMLEVGNGGMTKDEYIIHFSLWAISKAPLLL 298
            D + S+ SRAD N+ +A YA PGGWNDPDMLEVGNGGM++ EY  HFS+WA++KAPLL+
Sbjct: 187 ADNWGSMTSRADENDQWAAYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAKAPLLI 246
Query: 299 GCDVRNLTKDTMDIIGNKEVIAINQDPLGVQAKKVRTD--VEIWTAPLSGYRFAVLIVNR 356
           GCDVR++++ T +I+ N EVIA+NQD LGVQ KKV++D  +E+W  PLS  R AV++ NR
Sbjct: 247 GCDVRSMSQQTKNILSNSEVIAVNQDSLGVQGKKVQSDNGLEVWAGPLSNNRKAVVLWNR 306
Query: 357 DQWPANVTTHLEDFGIPPKTSVTARDLWEHKTLETPLAGNLSANLDPHTCKMYLLQP 413
             + A +T H  + G+    +VTARDLW H +      G +SA++ PH CKMY+L P
Sbjct: 307 QSYQATITAHWSNIGLAGSVAVTARDLWAHSSFAAQ--GQISASVAPHDCKMYVLTP 361
>pdb|3A5V|A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea Length = 397 Back     alignment and structure
>pdb|1KTB|A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase Length = 405 Back     alignment and structure
>pdb|3LX9|A Chain A, Interconversion Of Human Lysosomal Enzyme Specificities Length = 404 Back     alignment and structure
>pdb|1R46|A Chain A, Structure Of Human Alpha-galactosidase Length = 398 Back     alignment and structure
>pdb|3HG3|A Chain A, Human Alpha-Galactosidase Catalytic Mechanism 2. Substrate Bound Length = 404 Back     alignment and structure
>pdb|3LRK|A Chain A, Structure Of Alfa-Galactosidase (Mel1) From Saccharomyces Cerevisiae Length = 479 Back     alignment and structure
>pdb|3LRM|A Chain A, Structure Of Alfa-Galactosidase From Saccharomyces Cerevisiae With Raffinose Length = 479 Back     alignment and structure
>pdb|3H53|A Chain A, Crystal Structure Of Human Alpha-N-Acetylgalactosaminidase Length = 400 Back     alignment and structure
>pdb|3A21|A Chain A, Crystal Structure Of Streptomyces Avermitilis Beta-L- Arabinopyranosidase Length = 614 Back     alignment and structure
>pdb|1SZN|A Chain A, The Structure Of Alpha-Galactosidase Length = 417 Back     alignment and structure
>pdb|3CC1|A Chain A, Crystal Structure Of A Putative Alpha-N-Acetylgalactosaminidase (Bh1870) From Bacillus Halodurans C-125 At 2.00 A Resolution Length = 433 Back     alignment and structure
>pdb|2XN2|A Chain A, Structure Of Alpha-Galactosidase From Lactobacillus Acidophilus Ncfm With Galactose Length = 732 Back     alignment and structure
>pdb|2XN0|A Chain A, Structure Of Alpha-Galactosidase From Lactobacillus Acidophilus Ncfm, Ptcl4 Derivative Length = 732 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query415
3a21_A 614 Putative secreted alpha-galactosidase; beta-alpha- 1e-143
1uas_A362 Alpha-galactosidase; TIM-barrel, beta-alpha-barrel 1e-142
3lrk_A479 Alpha-galactosidase 1; tetramer, GH27, glycoprotei 1e-137
1szn_A417 Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma 1e-135
3a5v_A397 Alpha-galactosidase; beta/alpha barrel, N-glycosyl 1e-134
1ktb_A405 Alpha-N-acetylgalactosaminidase; glycoprotein, (be 1e-128
3hg3_A404 Alpha-galactosidase A; glycoprotein, carbohydrate- 1e-126
3cc1_A433 BH1870 protein, putative alpha-N-acetylgalactosami 1e-117
2xn2_A732 Alpha-galactosidase; hydrolase, glycosidase; HET: 2e-30
3mi6_A745 Alpha-galactosidase; NESG, structural genomics, PS 2e-21
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 2e-18
1zy9_A564 Alpha-galactosidase; TM1192, struc genomics, joint 4e-18
3a24_A641 Alpha-galactosidase; glycoside hydrolase family 97 5e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* Length = 614 Back     alignment and structure
 Score =  419 bits (1078), Expect = e-143
 Identities = 123/348 (35%), Positives = 174/348 (50%), Gaps = 25/348 (7%)

Query: 53  LANGLGKSPPMGWNSWNHFWCDINEDIVKAAADALVSSGLSKLGYEYVNIDDCWGEQVRD 112
                  S PMGW SWN F   I+  ++K   DA V++GL   GY Y+NID+ W +  RD
Sbjct: 4   TRQITVPSAPMGWASWNSFAAKIDYSVIKKQVDAFVAAGLPAAGYTYINIDEGWWQGTRD 63

Query: 113 ENGNLQAKNATFPSGIKALADYVHSKGLKLGMYSSAGYYTCS---------KQMPGSLGY 163
             GN+    A +P G+ A+  Y+HSKGLK G+Y+ AG   C              GS G+
Sbjct: 64  SAGNITVDTAEWPGGMSAITAYIHSKGLKAGIYTDAGKDGCGYYYPTGRPAAPGSGSEGH 123

Query: 164 EEQDAKTFALWGVDYLKYDNCYTDG--SKPMDRYPIMT----RALMKAGRPIYYSLCEWG 217
            +QD   F+ WG D++K D C  D         Y  ++    RA    GRP+  S+C WG
Sbjct: 124 YDQDMLQFSTWGFDFVKVDWCGGDAEGLDAATTYKSISDAVGRAAATTGRPLTLSICNWG 183

Query: 218 DMHPALWGFQVGNSWRTTGDI-----TDTFESVMSRADANEVYADYARPGGWNDPDMLEV 272
             +P  W       WRT+ DI       +  S++S  D   ++      G +NDPDML V
Sbjct: 184 YQNPWNWAAGQAPLWRTSTDIIYYGNQPSMTSLLSNFDQT-LHPTAQHTGYYNDPDMLMV 242

Query: 273 GNGGMTKDEYIIHFSLWAISKAPLLLGCDVRNLTKDTMDIIGNKEVIAINQDPLGVQAKK 332
           G  G T  +   H +LWAIS APLL G D+  +T +T  I+ N EVIA++QD  G+Q  K
Sbjct: 243 GMDGFTAAQNRTHMNLWAISGAPLLAGNDLTTMTSETAGILKNPEVIAVDQDSRGLQGVK 302

Query: 333 VRT---DVEIWTAPLSGY-RFAVLIVNRDQWPANVTTHLEDFGIPPKT 376
           V      ++ +   LSG    AV+++NR     ++T    D G+   +
Sbjct: 303 VAEDTTGLQAYGKVLSGTGNRAVVLLNRTSAAHDITVRWSDLGLTNAS 350
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Length = 362 Back     alignment and structure
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A* Length = 479 Back     alignment and structure
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Length = 417 Back     alignment and structure
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} Length = 397 Back     alignment and structure
>1ktb_A Alpha-N-acetylgalactosaminidase; glycoprotein, (beta/alpha)8 barrel, hydrolase; HET: NAG; 1.90A {Gallus gallus} SCOP: b.71.1.1 c.1.8.1 PDB: 1ktc_A* 3h55_A* 3h54_A* 3h53_A* 3igu_A* Length = 405 Back     alignment and structure
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A* Length = 404 Back     alignment and structure
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Length = 433 Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Length = 732 Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Length = 745 Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Length = 720 Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Length = 564 Back     alignment and structure
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} Length = 641 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query415
3hg3_A404 Alpha-galactosidase A; glycoprotein, carbohydrate- 100.0
3lrk_A479 Alpha-galactosidase 1; tetramer, GH27, glycoprotei 100.0
1uas_A362 Alpha-galactosidase; TIM-barrel, beta-alpha-barrel 100.0
3a5v_A397 Alpha-galactosidase; beta/alpha barrel, N-glycosyl 100.0
1szn_A417 Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma 100.0
4do4_A400 Alpha-N-acetylgalactosaminidase; pharmacological c 100.0
3cc1_A433 BH1870 protein, putative alpha-N-acetylgalactosami 100.0
3a21_A 614 Putative secreted alpha-galactosidase; beta-alpha- 100.0
1zy9_A564 Alpha-galactosidase; TM1192, struc genomics, joint 100.0
4fnq_A729 Alpha-galactosidase AGAB; glycoside hydrolase, hyd 100.0
2xn2_A732 Alpha-galactosidase; hydrolase, glycosidase; HET: 100.0
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 100.0
3mi6_A745 Alpha-galactosidase; NESG, structural genomics, PS 100.0
3a24_A641 Alpha-galactosidase; glycoside hydrolase family 97 99.93
2d73_A738 Alpha-glucosidase SUSB; glycoside hydrolase family 99.82
2f2h_A 773 Putative family 31 glucosidase YICI; BETA8alpha8 b 99.45
2g3m_A 693 Maltase, alpha-glucosidase; hydrolase, glycoside h 99.39
4ba0_A 817 Alpha-glucosidase, putative, ADG31B; hydrolase; HE 99.21
3nsx_A 666 Alpha-glucosidase; structural genomics, PSI-2, pro 99.1
2xvl_A 1020 Alpha-xylosidase, putative, XYL31A; hydrolase, gly 99.1
3l4y_A 875 Maltase-glucoamylase, intestinal; glycoside hydrol 98.94
3lpp_A 898 Sucrase-isomaltase; glycoside hydrolase family 31, 98.87
3zss_A695 Putative glucanohydrolase PEP1A; alpha-glucan bios 98.41
3top_A 908 Maltase-glucoamylase, intestinal; membrane, hydrol 98.34
3edf_A601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 97.74
2x2h_A 1027 Alpha-1,4-glucan lyase isozyme 1; anhydrofructose 97.53
1ji1_A637 Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 97.41
2guy_A478 Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; 97.37
2aaa_A484 Alpha-amylase; glycosidase; 2.10A {Aspergillus nig 97.21
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 97.2
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 96.98
1ua7_A422 Alpha-amylase; beta-alpha-barrels, acarbose, greek 96.97
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 96.93
2wc7_A488 Alpha amylase, catalytic region; CD/PUL-hydrolyzin 96.86
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 96.72
3dhu_A449 Alpha-amylase; structural genomics, hydrolase, gly 96.53
4aee_A696 Alpha amylase, catalytic region; hydrolase, hypert 96.45
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 96.4
1wpc_A485 Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr 96.15
1hvx_A515 Alpha-amylase; hydrolase, glycosyltransferase, the 96.07
3bh4_A483 Alpha-amylase; calcium, carbohydrate metabolism, g 95.75
1ud2_A480 Amylase, alpha-amylase; calcium-free, alkaline, hy 95.66
1d3c_A 686 Cyclodextrin glycosyltransferase; alpha-amylase, p 94.18
3ues_A478 Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr 93.86
2bhu_A602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 92.55
1m7x_A617 1,4-alpha-glucan branching enzyme; alpha/beta barr 92.48
3m07_A618 Putative alpha amylase; IDP00968, csgid, structura 92.24
3eyp_A469 Putative alpha-L-fucosidase; structural genomics, 92.11
4aie_A549 Glucan 1,6-alpha-glucosidase; hydrolase, glycoside 90.79
3vgf_A558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 89.56
2zxd_A455 Alpha-L-fucosidase, putative; TIM barrel, hydrolas 89.5
4gqr_A496 Pancreatic alpha-amylase; glycosyl hydrolase, diab 89.42
3gza_A443 Putative alpha-L-fucosidase; NP_812709.1, structur 89.2
2wvv_A450 Alpha-L-fucosidase; alpha-L-fucose, hydrolase, gly 88.4
4axn_A328 Chitinase C1; hydrolase; 1.68A {Serratia marcescen 88.05
1g5a_A628 Amylosucrase; glycosyltransferase, glycoside hydro 87.89
2dh2_A424 4F2 cell-surface antigen heavy chain; TIM-barrel, 87.64
1qho_A 686 Alpha-amylase; glycoside hydrolase, starch degrada 85.5
3faw_A 877 Reticulocyte binding protein; TIM barrel, beta bar 85.18
2ya0_A 714 Putative alkaline amylopullulanase; hydrolase, gly 84.73
1cyg_A 680 Cyclodextrin glucanotransferase; glycosyltransfera 84.22
3czg_A 644 Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 84.14
2ze0_A 555 Alpha-glucosidase; TIM barrel, glucoside hydrolase 83.52
3poh_A451 Endo-beta-N-acetylglucosaminidase F1; TIM barrel, 83.39
1m53_A570 Isomaltulose synthase; klebsiella SP. LX3, sucrose 83.35
2c7f_A513 Alpha-L-arabinofuranosidase; glycosidase, xylan, a 83.23
1qw9_A502 Arabinosidase, alpha-L-arabinofuranosidase; hydrol 82.9
1zja_A 557 Trehalulose synthase; sucrose isomerase, alpha-amy 82.78
1edt_A271 Endo-beta-N-acetylglucosaminidase H, endo H; hydro 82.78
2yih_A524 CEL44C, xyloglucanase; hydrolase, GH44, endo-gluca 82.67
1ht6_A405 AMY1, alpha-amylase isozyme 1; barley, beta-alpha- 82.2
2vrq_A496 Alpha-L-arabinofuranosidase; hydrolase, glycosidas 81.25
3n12_A333 Chitinase A, chinctu2; zinc atoms, complex, hydrol 80.77
1uok_A558 Oligo-1,6-glucosidase; sugar degradation, hydrolas 80.63
1gcy_A 527 Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b 80.49
3bmv_A 683 Cyclomaltodextrin glucanotransferase; glycosidase, 80.24
1gjw_A637 Maltodextrin glycosyltransferase; alpha-amylase, m 80.21
1x7f_A385 Outer surface protein; structural genomics, unknow 80.02
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A* Back     alignment and structure
Probab=100.00  E-value=8.9e-94  Score=720.06  Aligned_cols=359  Identities=42%  Similarity=0.771  Sum_probs=331.6

Q ss_pred             ccCCCCCCCceEEecccccCCC----------CCHHHHHHHHHHHHHcCCcccCceEEEeCCCccccCCCCCCCeeecCC
Q 014963           53 LANGLGKSPPMGWNSWNHFWCD----------INEDIVKAAADALVSSGLSKLGYEYVNIDDCWGEQVRDENGNLQAKNA  122 (415)
Q Consensus        53 ~~~~~~~~pp~GWnsW~~~~~~----------i~e~~i~~~ad~l~~~gl~~~G~~~~~IDdGW~~~~~d~~G~~~~~~~  122 (415)
                      ++||++++||||||||+.|+|+          |||+.|+++||+|++.||+++||+||+||||||...||..|+|++|++
T Consensus         1 l~ngla~tppmGWnsW~~~~~~~d~~~~~~~~i~e~~i~~~ad~~~~~Gl~~~G~~~~~iDDgW~~~~rd~~G~~~~~~~   80 (404)
T 3hg3_A            1 LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQ   80 (404)
T ss_dssp             CCSSCCSSCCEEEESHHHHTTCCCTTTCTTTSSSHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTT
T ss_pred             CCCCCCCCCceEEEcHhhhccCccccccccCCcCHHHHHHHHHHHHHCCcHhhCCeEEEECCCcCCCCCCCCCCeeeChh
Confidence            4789999999999999999999          799999999999999999999999999999999988999999999999


Q ss_pred             CCCCcHHHHHHHHHHcCCeEEEEeeCCcccccCCCCChhHHHHHHHHHHHHcCCcEEEeecCCCCCCC-ccchHHHHHHH
Q 014963          123 TFPSGIKALADYVHSKGLKLGMYSSAGYYTCSKQMPGSLGYEEQDAKTFALWGVDYLKYDNCYTDGSK-PMDRYPIMTRA  201 (415)
Q Consensus       123 ~FP~Gl~~l~~~i~~~Glk~Giw~~pg~~~c~~~~pg~~~~~~~~~~~~~~wGvdyiK~D~~~~~~~~-~~~~y~~~~~a  201 (415)
                      |||+||++|+++||++|||||||+++|..+|.++ ||+++|++.++++|++|||||||+|+|+..... ..++|.+|.+|
T Consensus        81 kFP~Gl~~l~~~ih~~Glk~Giw~~~g~~tC~~~-pGs~~~~~~da~~fa~WGvDylK~D~C~~~~~~~~~~~y~~m~~A  159 (404)
T 3hg3_A           81 RFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGF-PGSFGYYDIDAQTFADWGVDLLKFAGCYCDSLENLADGYKHMSLA  159 (404)
T ss_dssp             TSTTHHHHHHHHHHHTTCEEEEEEESSSBCTTSS-BCCTTCHHHHHHHHHHHTCCEEEEECCSCSCHHHHHHHHHHHHHH
T ss_pred             hcCCCHHHHHHHHHHCCCeeEEEecCCccccCCC-CccHHHHHHHHHHHHHhCCcEEEecCcCCCcchhHHHHHHHHHHH
Confidence            9999999999999999999999999999999876 999999999999999999999999999875443 46799999999


Q ss_pred             HHHcCCCEEEEecCCCCCC----cCcc--cccccceEeecCCCCCchhhHHHHHHH----hhhhhhccCCCCCCCCCccc
Q 014963          202 LMKAGRPIYYSLCEWGDMH----PALW--GFQVGNSWRTTGDITDTFESVMSRADA----NEVYADYARPGGWNDPDMLE  271 (415)
Q Consensus       202 l~~~g~~i~~~~c~~g~~~----p~~~--~~~~~~~~R~s~D~~~~w~~~~~~~~~----~~~~~~~~~~~~~~DpD~l~  271 (415)
                      |+++||+|+|+ |+|+...    ...|  ..+++|+||++.|+.+.|.++.++++.    +..++.+++|++|||||||+
T Consensus       160 L~~tGRpi~~s-c~w~~~~~~~~~~~~~~~~~~~n~WR~~~Di~d~W~sv~~i~~~~~~~~~~~~~~agpG~wnDpDML~  238 (404)
T 3hg3_A          160 LNRTGRSIVYS-CEWPLYMWPFQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLV  238 (404)
T ss_dssp             HHHTTCCCEEE-ECTGGGGTTTSCCCHHHHHHHCSEEECSCCCCSSHHHHHHHHHHHHHTHHHHTTTCBTTBEEECCCBC
T ss_pred             HHhcCCCEEEE-eCCCcccccccccchHHHhhhCcEEEecCCcCcchHHHHHHHHHHhhhhhhhHhhcCCCCcCCCccee
Confidence            99999999999 9986321    0112  247899999999999999999888774    34678899999999999999


Q ss_pred             cCCCCCCHHHHHHHHHHHHHHcCccccccCCCCCChhhhhhccChhhhhhccCCCccccEEeec--CceEEEEEcCCCcE
Q 014963          272 VGNGGMTKDEYIIHFSLWAISKAPLLLGCDVRNLTKDTMDIIGNKEVIAINQDPLGVQAKKVRT--DVEIWTAPLSGYRF  349 (415)
Q Consensus       272 vg~~~lt~~E~r~~~~~~a~~gspL~is~Dl~~l~~~~~~ll~N~~~lai~qd~lG~~~~~~~~--d~~vw~~~l~~g~~  349 (415)
                      ||+.+||.+|+|+||++|||++|||++|+||++|+++.+++|+|+|||+||||++|++++++..  +.+||++++++|++
T Consensus       239 vGn~glT~~E~rthfslWai~~sPLiiG~Dl~~~~~~tl~iLtN~evIAinQD~lG~q~~~v~~~~~~~VW~~~l~~g~~  318 (404)
T 3hg3_A          239 IGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGYQLRQGDNFEVWERPLSGLAW  318 (404)
T ss_dssp             TTSSSCCHHHHHHHHHHHHHTTCCEEECSCTTSCCHHHHHHHTCHHHHHHHTCTTCCCCEEEEEETTEEEEEEECSTTCE
T ss_pred             cCCCCCCHHHHHHHHHHHHHhcCceEecCCcccCCHHHHHHhcCHHHHhhhccccCCcceEEEecCCeEEEEEECCCCCE
Confidence            9999999999999999999999999999999999999999999999999999999999999987  78999999999999


Q ss_pred             EEEEEecCC--CCeeEEeeccccCC---CCCCeEEEEEecCCccccccc--CceEEEEECCCcEEEEEEEeC
Q 014963          350 AVLIVNRDQ--WPANVTTHLEDFGI---PPKTSVTARDLWEHKTLETPL--AGNLSANLDPHTCKMYLLQPI  414 (415)
Q Consensus       350 ~Va~fN~~~--~~~~~~i~l~~lGL---~~~~~~~v~Dlw~g~~l~~~~--~~~l~~~l~ph~~~ll~l~p~  414 (415)
                      ||++||+++  ++++++++|++|||   .+...|+|||||+++++ +.+  +++|+++|+||||+||||+|.
T Consensus       319 aValfN~~~~~~~~~vtv~~~~lGl~~~~~~~~~~vrDLW~~~~l-g~~~~~~~~~~~V~pHg~~llrlt~~  389 (404)
T 3hg3_A          319 AVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLLPVKRKL-GFYEWTSRLRSHINPTGTVLLQLENT  389 (404)
T ss_dssp             EEEEEECCCSSSCEEEEEEGGGSGGGTTTSSEEEEEEEESSCEEE-EEEETTCEEEEEECTTCEEEEEEEEH
T ss_pred             EEEEEEcCCCCCceEEEEEHHHcCCcccCCCCceEEEECCCCccc-ccccccceEEEEECCCeEEEEEEEcC
Confidence            999999999  89999999999999   55578999999999998 543  578999999999999999985
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A* Back     alignment and structure
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} Back     alignment and structure
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Back     alignment and structure
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A* Back     alignment and structure
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Back     alignment and structure
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Back     alignment and structure
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Back     alignment and structure
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A* Back     alignment and structure
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* Back     alignment and structure
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* Back     alignment and structure
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A* Back     alignment and structure
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* Back     alignment and structure
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* Back     alignment and structure
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* Back     alignment and structure
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Back     alignment and structure
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Back     alignment and structure
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* Back     alignment and structure
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A Back     alignment and structure
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A Back     alignment and structure
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Back     alignment and structure
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Back     alignment and structure
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* Back     alignment and structure
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A Back     alignment and structure
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A Back     alignment and structure
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... Back     alignment and structure
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A* Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Back     alignment and structure
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron} Back     alignment and structure
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Back     alignment and structure
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A* Back     alignment and structure
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... Back     alignment and structure
>3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomic center for structural genomics, JCSG; HET: MSE EPE; 1.60A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A* Back     alignment and structure
>4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens} Back     alignment and structure
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* Back     alignment and structure
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A Back     alignment and structure
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* Back     alignment and structure
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* Back     alignment and structure
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* Back     alignment and structure
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 Back     alignment and structure
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A Back     alignment and structure
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP} Back     alignment and structure
>3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A Back     alignment and structure
>1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A Back     alignment and structure
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* Back     alignment and structure
>1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A Back     alignment and structure
>2yih_A CEL44C, xyloglucanase; hydrolase, GH44, endo-glucanase, carbohydrate-binding protei; HET: BGC; 1.70A {Paenibacillus polymyxa} PDB: 2yjq_A* 2ykk_A* 3zq9_A* Back     alignment and structure
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* Back     alignment and structure
>2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A Back     alignment and structure
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Back     alignment and structure
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* Back     alignment and structure
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A Back     alignment and structure
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* Back     alignment and structure
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 415
d1uasa2273 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [ 1e-102
d1r46a2292 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) 3e-96
d1ktba2293 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallu 2e-95
d1szna2314 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [T 3e-87
d1zy9a2348 c.1.8.13 (A:178-525) Alpha-galactosidase GalA cata 3e-58
d1uasa189 b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa 5e-25
d1ktba195 b.71.1.1 (A:294-388) Melibiase {Chicken (Gallus ga 2e-20
d1r46a198 b.71.1.1 (A:324-421) Melibiase {Human (Homo sapien 8e-17
d1szna1103 b.71.1.1 (A:315-417) Melibiase {Trichoderma reesei 5e-16
>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Length = 273 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Rice (Oryza sativa) [TaxId: 4530]

 Score =  303 bits (776), Expect = e-102
 Identities = 175/270 (64%), Positives = 214/270 (79%)

Query: 55  NGLGKSPPMGWNSWNHFWCDINEDIVKAAADALVSSGLSKLGYEYVNIDDCWGEQVRDEN 114
           NGLG++P MGWNSWNHF+C INE I++  ADALV++GL+KLGY+YVNIDDCW E  RD  
Sbjct: 3   NGLGRTPQMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQ 62

Query: 115 GNLQAKNATFPSGIKALADYVHSKGLKLGMYSSAGYYTCSKQMPGSLGYEEQDAKTFALW 174
           GN      TFPSGIKALADYVH+KGLKLG+YS AG  TCS +MPGSL +EEQD KTFA W
Sbjct: 63  GNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFASW 122

Query: 175 GVDYLKYDNCYTDGSKPMDRYPIMTRALMKAGRPIYYSLCEWGDMHPALWGFQVGNSWRT 234
           GVDYLKYDNC   G   M+RY  M+ A+   G+ I++SLCEWG  +PA W  ++GNSWRT
Sbjct: 123 GVDYLKYDNCNDAGRSVMERYTRMSNAMKTYGKNIFFSLCEWGKENPATWAGRMGNSWRT 182

Query: 235 TGDITDTFESVMSRADANEVYADYARPGGWNDPDMLEVGNGGMTKDEYIIHFSLWAISKA 294
           TGDI D + S+ SRAD N+ +A YA PGGWNDPDMLEVGNGGM++ EY  HFS+WA++KA
Sbjct: 183 TGDIADNWGSMTSRADENDQWAAYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAKA 242

Query: 295 PLLLGCDVRNLTKDTMDIIGNKEVIAINQD 324
           PLL+GCDVR++++ T +I+ N EVIA+NQD
Sbjct: 243 PLLIGCDVRSMSQQTKNILSNSEVIAVNQD 272
>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Length = 292 Back     information, alignment and structure
>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Length = 293 Back     information, alignment and structure
>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Length = 314 Back     information, alignment and structure
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 348 Back     information, alignment and structure
>d1uasa1 b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Length = 89 Back     information, alignment and structure
>d1ktba1 b.71.1.1 (A:294-388) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Length = 95 Back     information, alignment and structure
>d1r46a1 b.71.1.1 (A:324-421) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Length = 98 Back     information, alignment and structure
>d1szna1 b.71.1.1 (A:315-417) Melibiase {Trichoderma reesei [TaxId: 51453]} Length = 103 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query415
d1uasa2273 Melibiase {Rice (Oryza sativa) [TaxId: 4530]} 100.0
d1r46a2292 Melibiase {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1ktba2293 Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} 100.0
d1szna2314 Melibiase {Trichoderma reesei [TaxId: 51453]} 100.0
d1zy9a2348 Alpha-galactosidase GalA catalytic domain {Thermot 100.0
d1uasa189 Melibiase {Rice (Oryza sativa) [TaxId: 4530]} 99.83
d1ktba195 Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} 99.78
d1r46a198 Melibiase {Human (Homo sapiens) [TaxId: 9606]} 99.71
d1szna1103 Melibiase {Trichoderma reesei [TaxId: 51453]} 99.68
d2f2ha4338 Putative glucosidase YicI, domain 2 {Escherichia c 99.36
d1ji1a283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 98.25
d1wzla283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 97.66
d1j0ha283 Neopullulanase {Bacillus stearothermophilus [TaxId 97.62
d1ea9c280 Maltogenic amylase {Bacillus sp., cyclomaltodextri 97.56
d2bhua3420 Glycosyltrehalose trehalohydrolase, central domain 94.93
d1eh9a3400 Glycosyltrehalose trehalohydrolase, central domain 94.2
d1m53a178 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 93.81
d1qw9a1130 Alpha-l-arabinofuranosidase {Bacillus stearothermo 93.54
d1hl9a2350 Putative alpha-L-fucosidase, catalytic domain {The 93.39
d1j0ha3382 Neopullulanase, central domain {Bacillus stearothe 93.27
d2c7fa1131 Alpha-l-arabinofuranosidase {Clostridium thermocel 92.37
d1wzla3382 Maltogenic amylase, central domain {Thermoactinomy 92.05
d1uoka179 Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 139 92.0
d1wzaa2409 Bacterial alpha-amylase {Halothermothrix orenii [T 91.87
d1ua7a2344 Bacterial alpha-amylase {Bacillus subtilis [TaxId: 91.04
d2d3na2394 Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 90.95
d1ea9c3382 Maltogenic amylase, central domain {Bacillus sp., 90.9
d1ht6a2347 Plant alpha-amylase {Barley (Hordeum vulgare), AMY 90.41
d3bmva4406 Cyclodextrin glycosyltransferase {Thermoanaerobact 90.03
d1e43a2393 Bacterial alpha-amylase {Chimera (Bacillus amyloli 89.98
d1g5aa2554 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 89.67
d2guya2381 Fungal alpha-amylases {Aspergillus oryzae, Taka-am 89.5
d1edta_265 Endo-beta-N-acetylglucosaminidase {Streptomyces pl 89.3
d1h3ga3422 Cyclomaltodextrinase, central domain {Flavobacteri 88.74
d1lwha2391 4-alpha-glucanotransferase {Thermotoga maritima [T 88.25
d1qhoa4407 Cyclodextrin glycosyltransferase {Bacillus stearot 88.01
d1m53a2 478 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 87.99
d1hvxa2393 Bacterial alpha-amylase {Bacillus stearothermophil 87.57
d1uoka2 479 Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 87.49
d2ebna_285 Endo-beta-N-acetylglucosaminidase {Flavobacterium 87.32
d1m7xa3396 1,4-alpha-glucan branching enzyme, central domain 86.96
d1g5aa174 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 86.83
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 86.8
d1h3ga283 Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId 86.37
d1hx0a2403 Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 85.6
d1jaea2378 Animal alpha-amylase {Yellow mealworm (Tenebrio mo 85.18
d2aaaa2381 Fungal alpha-amylases {Aspergillus niger, acid amy 84.71
d1g94a2354 Bacterial alpha-amylase {Pseudoalteromonas halopla 83.4
d1x7fa2244 Outer surface protein, N-terminal domain {Bacillus 81.75
d1bf2a3475 Isoamylase, central domain {Pseudomonas amyloderam 80.4
>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=100.00  E-value=7.1e-68  Score=509.49  Aligned_cols=272  Identities=64%  Similarity=1.202  Sum_probs=261.4

Q ss_pred             ccCCCCCCCceEEecccccCCCCCHHHHHHHHHHHHHcCCcccCceEEEeCCCccccCCCCCCCeeecCCCCCCcHHHHH
Q 014963           53 LANGLGKSPPMGWNSWNHFWCDINEDIVKAAADALVSSGLSKLGYEYVNIDDCWGEQVRDENGNLQAKNATFPSGIKALA  132 (415)
Q Consensus        53 ~~~~~~~~pp~GWnsW~~~~~~i~e~~i~~~ad~l~~~gl~~~G~~~~~IDdGW~~~~~d~~G~~~~~~~~FP~Gl~~l~  132 (415)
                      .+||++++||||||||++|+++|||+.+++.+++++++||+++||+||+||||||..++|..|+|+++++|||+|||+++
T Consensus         1 ~~ngla~tPp~GwnsW~~~~~~i~e~~~~~~~~~~~~~gl~~~G~~~~~iDdGW~~~~~d~~g~~~~~~~~fP~Gl~~~~   80 (273)
T d1uasa2           1 FENGLGRTPQMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALA   80 (273)
T ss_dssp             CCSSCCSSCCEEEESHHHHTTCCCHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHH
T ss_pred             CCCccCCCCCCccCcHHhhCcCCCHHHHHHHHHHHHHcCchhhCCeEEEEcCCcCCCCCCCCCCcccCccccCCChHHHH
Confidence            37999999999999999999999999999999999999999999999999999999888999999999999999999999


Q ss_pred             HHHHHcCCeEEEEeeCCcccccCCCCChhHHHHHHHHHHHHcCCcEEEeecCCCCCCCccchHHHHHHHHHHcCCCEEEE
Q 014963          133 DYVHSKGLKLGMYSSAGYYTCSKQMPGSLGYEEQDAKTFALWGVDYLKYDNCYTDGSKPMDRYPIMTRALMKAGRPIYYS  212 (415)
Q Consensus       133 ~~i~~~Glk~Giw~~pg~~~c~~~~pg~~~~~~~~~~~~~~wGvdyiK~D~~~~~~~~~~~~y~~~~~al~~~g~~i~~~  212 (415)
                      +++|++|||||||++|+...|...+|+++.|++.++++|++|||||||+|||........++|..+.++|++++++++++
T Consensus        81 ~~~~~~G~~~Glw~~~~~~~~~~~~~~~~~~~~~d~~~~~~wGvd~vK~D~~~~~~~~~~~~~~~~~~~l~~~~r~~~~~  160 (273)
T d1uasa2          81 DYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDNCNDAGRSVMERYTRMSNAMKTYGKNIFFS  160 (273)
T ss_dssp             HHHHHTTCEEEEEEESSSBCTTSSSBCCTTCHHHHHHHHHHHTCCEEEEECCCCTTCCHHHHHHHHHHHHHHHCTTSEEE
T ss_pred             HHHHhCCCeEEEecCCcccccCCCCCcchhhHHHHHHHHHhCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcEEe
Confidence            99999999999999999999999999999999999999999999999999999887778889999999999999999999


Q ss_pred             ecCCCCCCcCcccccccceEeecCCCCCchhhHHHHHHHhhhhhhccCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHH
Q 014963          213 LCEWGDMHPALWGFQVGNSWRTTGDITDTFESVMSRADANEVYADYARPGGWNDPDMLEVGNGGMTKDEYIIHFSLWAIS  292 (415)
Q Consensus       213 ~c~~g~~~p~~~~~~~~~~~R~s~D~~~~w~~~~~~~~~~~~~~~~~~~~~~~DpD~l~vg~~~lt~~E~r~~~~~~a~~  292 (415)
                      .|.++...+..+..+|+|+||+++|+.+.|+++.++++.+..++.+.+++.|+||||+.+++.++|.+|.|+||++|||+
T Consensus       161 ~~~~g~~~~~~~~~~~~~~~R~s~D~~~~w~~~~~~~~~~~~~~~~~g~~~~~D~D~~~~~~~~~t~~E~rt~~al~~i~  240 (273)
T d1uasa2         161 LCEWGKENPATWAGRMGNSWRTTGDIADNWGSMTSRADENDQWAAYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALA  240 (273)
T ss_dssp             EESTTTTCGGGTGGGTCSEEECSSCCCSSHHHHHHHHHHHHTTGGGCBTTBEEECCCCCTTSSSSCHHHHHHHHHHHHHT
T ss_pred             ecccCCCcchhhhhhhhhhhcccCCcCcchhhHHHHHHHHHHHHHHhCCCcccCccccccCCCCCCHHHHHHHHHHHHHH
Confidence            99988777777778999999999999999999998888888888889999999999999999999999999999999999


Q ss_pred             cCccccccCCCCCChhhhhhccChhhhhhccC
Q 014963          293 KAPLLLGCDVRNLTKDTMDIIGNKEVIAINQD  324 (415)
Q Consensus       293 gspL~is~Dl~~l~~~~~~ll~N~~~lai~qd  324 (415)
                      +|||++|+|+++++++.+++|+|+|+||||||
T Consensus       241 ~~pL~i~~Dl~~l~~~~l~ll~N~e~IAinqd  272 (273)
T d1uasa2         241 KAPLLIGCDVRSMSQQTKNILSNSEVIAVNQD  272 (273)
T ss_dssp             TCCEEECSCTTSCCHHHHHHHTCHHHHHHHTC
T ss_pred             hchhhhcCCcccCCHHHHHHhcCHHHHhhccC
Confidence            99999999999999999999999999999998
>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1uasa1 b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
>d1ktba1 b.71.1.1 (A:294-388) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1r46a1 b.71.1.1 (A:324-421) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1szna1 b.71.1.1 (A:315-417) Melibiase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ji1a2 b.71.1.1 (A:555-637) Maltogenic amylase {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d1wzla2 b.71.1.1 (A:503-585) Maltogenic amylase {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1j0ha2 b.71.1.1 (A:506-588) Neopullulanase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1ea9c2 b.71.1.1 (C:504-583) Maltogenic amylase {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d1m53a1 b.71.1.1 (A:521-598) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1qw9a1 b.71.1.2 (A:5-17,A:385-501) Alpha-l-arabinofuranosidase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2c7fa1 b.71.1.2 (A:2-16,A:387-502) Alpha-l-arabinofuranosidase {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1uoka1 b.71.1.1 (A:480-558) Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Back     information, alignment and structure
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Back     information, alignment and structure
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Back     information, alignment and structure
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1g5aa1 b.71.1.1 (A:555-628) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure
>d1h3ga2 b.71.1.1 (A:518-600) Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Back     information, alignment and structure
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Back     information, alignment and structure
>d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure