Citrus Sinensis ID: 015020
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 414 | 2.2.26 [Sep-21-2011] | |||||||
| Q56YU0 | 501 | Aldehyde dehydrogenase fa | yes | no | 0.985 | 0.814 | 0.734 | 1e-179 | |
| Q9SU63 | 538 | Aldehyde dehydrogenase fa | no | no | 0.951 | 0.732 | 0.563 | 1e-132 | |
| P27463 | 509 | Retinal dehydrogenase 1 O | yes | no | 0.954 | 0.776 | 0.565 | 1e-130 | |
| P00352 | 501 | Retinal dehydrogenase 1 O | yes | no | 0.954 | 0.788 | 0.553 | 1e-130 | |
| Q8MI17 | 496 | Retinal dehydrogenase 1 O | yes | no | 0.954 | 0.796 | 0.565 | 1e-129 | |
| P51977 | 501 | Retinal dehydrogenase 1 O | N/A | no | 0.954 | 0.788 | 0.558 | 1e-129 | |
| P48644 | 501 | Retinal dehydrogenase 1 O | yes | no | 0.954 | 0.788 | 0.558 | 1e-129 | |
| P86886 | 500 | Retinal dehydrogenase 1 O | N/A | no | 0.954 | 0.79 | 0.558 | 1e-128 | |
| Q8HYE4 | 501 | Retinal dehydrogenase 1 O | N/A | no | 0.954 | 0.788 | 0.547 | 1e-128 | |
| Q8S528 | 534 | Aldehyde dehydrogenase fa | no | no | 0.954 | 0.739 | 0.549 | 1e-127 |
| >sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2 | Back alignment and function desciption |
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Score = 626 bits (1615), Expect = e-179, Method: Compositional matrix adjust.
Identities = 302/411 (73%), Positives = 347/411 (84%), Gaps = 3/411 (0%)
Query: 5 LSNGSCK--SLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVD 62
+ NG C + K+PEIKFTKLFING+F+D+ SGKTFETIDPR GE IA IAEGDKEDVD
Sbjct: 1 MENGKCNGATTVKLPEIKFTKLFINGQFIDAASGKTFETIDPRNGEVIATIAEGDKEDVD 60
Query: 63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGD 122
LAV AAR AFDHGPWPR +G ER ++ KFADLIEE+ E LA L+A+D GKL K D
Sbjct: 61 LAVNAARYAFDHGPWPRMTGFERAKLINKFADLIEENIEELAKLDAVDGGKLFQLGKYAD 120
Query: 123 IPGAANTLRYYAGAADKIHGEVLKMSR-ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181
IP A RY AGAADKIHGE LKM+R +L GYTL+EPIGVVG+IIPWNFP+ MF KV+
Sbjct: 121 IPATAGHFRYNAGAADKIHGETLKMTRQSLFGYTLKEPIGVVGNIIPWNFPSIMFATKVA 180
Query: 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDK 241
PA+AAGCTM+VKPAEQT L AL++AHL+K AG+PDGVLN+V GFG TAGAAIASHMD+DK
Sbjct: 181 PAMAAGCTMVVKPAEQTSLSALFYAHLSKEAGIPDGVLNIVTGFGSTAGAAIASHMDVDK 240
Query: 242 VSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGE 301
VSFTGSTDVGR++MQAAA SNLK VSLELGGKSPLLIF+D D++ AAD+ALLG +NKGE
Sbjct: 241 VSFTGSTDVGRKIMQAAAASNLKKVSLELGGKSPLLIFNDADIDKAADLALLGCFYNKGE 300
Query: 302 ICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHG 361
ICVASSRV+VQEGIYD+ +KLVEKAK W VGDPFD RQGPQVDK+QF++ILSYIEHG
Sbjct: 301 ICVASSRVFVQEGIYDKVVEKLVEKAKDWTVGDPFDSTARQGPQVDKRQFEKILSYIEHG 360
Query: 362 KREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
K EGATLLTGGK IG KGY+I+PTIF +VTEDM I ++EIFGPVM+LMKFK
Sbjct: 361 KNEGATLLTGGKAIGDKGYFIQPTIFADVTEDMKIYQDEIFGPVMSLMKFK 411
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Involved in ferulic acid and sinapic acid biosynthesis by oxidation of conyferylaldehyde and sinapaldehyde, respectively. Can oxidize L-lactaldehyde. Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 471 bits (1211), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/394 (56%), Positives = 285/394 (72%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW 77
++ T+L ING FVDS SGKTF T+DPRTGE IA +AEGD ED++ AVKAAR AFD GPW
Sbjct: 54 QVSHTQLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEGPW 113
Query: 78 PRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 137
P+ S ER ++L+FADL+E+H+E LA LE D GK + + +IP A RYYAG A
Sbjct: 114 PKMSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWA 173
Query: 138 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
DKIHG + Q +TL EPIGV G IIPWNFP MF KV PALA G T+++K AEQ
Sbjct: 174 DKIHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 233
Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
TPL A Y L AG+P GVLN+V GFG TAGAA+ASHMD+DK++FTGSTD G+ ++
Sbjct: 234 TPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVILGL 293
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
AA SNLKPV+LELGGKSP ++F+D D++ A ++A + FN+G+ C A SR +V E +YD
Sbjct: 294 AANSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYD 353
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 377
EF +K +A VVGDPF + QGPQ+D KQF++++ YI+ G ATL GG IG
Sbjct: 354 EFVEKSKARALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQIGD 413
Query: 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
KGY+I+PT+F+NV +DMLIA++EIFGPV +++KF
Sbjct: 414 KGYFIQPTVFSNVKDDMLIAQDEIFGPVQSILKF 447
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Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P27463|AL1A1_CHICK Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 465 bits (1197), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/396 (56%), Positives = 289/396 (72%), Gaps = 1/396 (0%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+IK+TK+FIN E+ DSVSGK FE +P E I +AEGDK D+D AVKAAR+AF+ G P
Sbjct: 25 KIKYTKIFINNEWHDSVSGKKFEVFNPANEEKICEVAEGDKADIDKAVKAARKAFELGSP 84
Query: 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K ADL+E LA +EA+D GKL S A + D+ T+RY AG
Sbjct: 85 WRTMDASERGRLLNKLADLVERDRLTLATMEAIDGGKLFSTAYLMDLGACIKTIRYCAGW 144
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKIHG + M +T EP+GV G IIPWNFP MF K++PAL G T++VKPAE
Sbjct: 145 ADKIHGRTVPMDGNFFTFTRHEPVGVCGQIIPWNFPLVMFIWKIAPALCCGNTVVVKPAE 204
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL ALY L K AG P GV+N+VPGFGPTAGAAI+ HMDIDKVSFTGST+VG+ + +
Sbjct: 205 QTPLSALYMGSLIKEAGFPPGVVNIVPGFGPTAGAAISHHMDIDKVSFTGSTEVGKLIKE 264
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA +NLK V+LELGGKSP +IF D D++ AA+ A +G+ +++G+ C+A SR++V+E IY
Sbjct: 265 AAGKTNLKRVTLELGGKSPNIIFADADLDEAAEFAHIGLFYHQGQCCIAGSRIFVEEPIY 324
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376
DEF ++ +E+AK + +GDP P V+QGPQ+DK+QF +IL IE GK+EGA L GG P G
Sbjct: 325 DEFVRRSIERAKKYTLGDPLLPGVQQGPQIDKEQFQKILDLIESGKKEGAKLECGGGPWG 384
Query: 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
KGY+I+PT+F+NVT+DM IAK EIFGPV +MKFK
Sbjct: 385 NKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFK 420
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Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Gallus gallus (taxid: 9031) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P00352|AL1A1_HUMAN Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 463 bits (1192), Expect = e-130, Method: Compositional matrix adjust.
Identities = 219/396 (55%), Positives = 291/396 (73%), Gaps = 1/396 (0%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+I++TK+FIN E+ DSVSGK F +P T E + ++ EGDKEDVD AVKAARQAF G P
Sbjct: 17 KIQYTKIFINNEWHDSVSGKKFPVFNPATEEELCQVEEGDKEDVDKAVKAARQAFQIGSP 76
Query: 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K ADLIE +LA +E+++ GKL+S A + D+ G TLRY AG
Sbjct: 77 WRTMDASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGW 136
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKI G + + YT EPIGV G IIPWNFP M K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIQGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAE 196
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +
Sbjct: 197 QTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKE 256
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK V+LELGGKSP ++ D D++ A + A G+ +++G+ C+A+SR++V+E IY
Sbjct: 257 AAGKSNLKRVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIY 316
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376
DEF ++ VE+AK +++G+P P V QGPQ+DK+Q+D+IL IE GK+EGA L GG P G
Sbjct: 317 DEFVRRSVERAKKYILGNPLTPGVTQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWG 376
Query: 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
KGY+++PT+F+NVT++M IAK EIFGPV +MKFK
Sbjct: 377 NKGYFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFK 412
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Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|Q8MI17|AL1A1_RABIT Retinal dehydrogenase 1 OS=Oryctolagus cuniculus GN=ALDH1A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 462 bits (1189), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/396 (56%), Positives = 290/396 (73%), Gaps = 1/396 (0%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+I++TK+FIN E+ DSVSGK F ++P T E I I EGDK DVD AVKAARQAF G P
Sbjct: 12 KIQYTKIFINNEWHDSVSGKKFPVLNPATEEQICLIEEGDKADVDKAVKAARQAFQIGSP 71
Query: 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K ADLIE +LA +E+L+AGKL A + D+ G TLRY AG
Sbjct: 72 WRTMDASERGRLLYKLADLIERDRLLLATMESLNAGKLFPNAYLMDLGGCIKTLRYCAGW 131
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKI G + M YT EP+GV G IIPWNFP M K+ PAL+ G T+IVKPAE
Sbjct: 132 ADKIQGRTMPMDGDFFCYTRHEPVGVCGQIIPWNFPLVMLIWKIGPALSCGNTVIVKPAE 191
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +
Sbjct: 192 QTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKE 251
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK V+LELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IY
Sbjct: 252 AAGKSNLKRVTLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIY 311
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376
DEF ++ VE+AK +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L GG P G
Sbjct: 312 DEFVRRSVERAKKYVLGNPLAPEVNQGPQIDKEQYNKILDLIESGKKEGAKLECGGGPWG 371
Query: 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
KGY+I+PT+F+NVT++M IAK EIFGPV +MKFK
Sbjct: 372 NKGYFIQPTVFSNVTDEMRIAKEEIFGPVQQIMKFK 407
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Can convert/oxidize retinaldehyde to retinoic acid. Oryctolagus cuniculus (taxid: 9986) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P51977|AL1A1_SHEEP Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 461 bits (1187), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/396 (55%), Positives = 288/396 (72%), Gaps = 1/396 (0%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+ K+TK+FIN E+ SVSGK F +P T E + + EGDKEDVD AVKAARQAF G P
Sbjct: 17 QFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSP 76
Query: 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K ADLIE +LA +EA++ GKL S A + D+ G TLRY AG
Sbjct: 77 WRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGW 136
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKI G + M YT EP+GV G IIPWNFP MF K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAE 196
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL AL+ L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +
Sbjct: 197 QTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKE 256
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK VSLELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IY
Sbjct: 257 AAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIY 316
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376
DEF ++ VE+AK +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L GG P G
Sbjct: 317 DEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWG 376
Query: 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
KGY+I+PT+F++VT+DM IAK EIFGPV +MKFK
Sbjct: 377 NKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFK 412
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Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Ovis aries (taxid: 9940) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P48644|AL1A1_BOVIN Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 461 bits (1186), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/396 (55%), Positives = 288/396 (72%), Gaps = 1/396 (0%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+ K+TK+FIN E+ SVSGK F +P T E + + EGDKEDVD AVKAARQAF G P
Sbjct: 17 QFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSP 76
Query: 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K ADLIE +LA +EA++ GKL S A + D+ G TLRY AG
Sbjct: 77 WRTMDASERGRLLNKLADLIERDHLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGW 136
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKI G + M YT EP+GV G IIPWNFP MF K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAE 196
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL AL+ L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +
Sbjct: 197 QTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKE 256
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK VSLELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IY
Sbjct: 257 AAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIY 316
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376
DEF ++ VE+AK +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L GG P G
Sbjct: 317 DEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWG 376
Query: 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
KGY+I+PT+F++VT+DM IAK EIFGPV +MKFK
Sbjct: 377 NKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFK 412
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Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P86886|AL1A1_MESAU Retinal dehydrogenase 1 OS=Mesocricetus auratus GN=ALDH1A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 459 bits (1182), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/396 (55%), Positives = 289/396 (72%), Gaps = 1/396 (0%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+I++TK+FIN E+ DSVSGK F I+P T E I + EGDK D+D AVKAARQAF G P
Sbjct: 16 KIQYTKIFINNEWHDSVSGKKFPVINPATEEVICHVEEGDKADIDKAVKAARQAFQIGSP 75
Query: 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K ADL+E +LA LEA + GK+ + + + D+ G L+Y AG
Sbjct: 76 WRTMDASERGRLLYKLADLMERDRLLLATLEATNGGKVFASSYLFDLGGCIKALKYCAGW 135
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADK+HG+ + + YT REPIGV G IIPWNFP MF K+ PAL G T+IVKPAE
Sbjct: 136 ADKVHGQTIPSDGDIFTYTRREPIGVCGQIIPWNFPLLMFIWKIGPALGCGNTVIVKPAE 195
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL ALY A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST VG+ + +
Sbjct: 196 QTPLTALYMASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTQVGKLIKE 255
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK V+LELGGKSP ++F D D++TA + A G+ +++G+ CVA+SR++V+E IY
Sbjct: 256 AAGKSNLKRVTLELGGKSPCIVFADADLDTAVEFAHYGVFYHQGQCCVAASRLFVEESIY 315
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376
DEF ++ VE+AK +V+G+P + + QGPQ+DK+Q D+IL IE GK+EGA L GG G
Sbjct: 316 DEFVRRSVERAKKYVLGNPLNSGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWG 375
Query: 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
KGY+++PT+F+NVT+DM IAK EIFGPV +MKFK
Sbjct: 376 NKGYFVQPTVFSNVTDDMRIAKEEIFGPVQQIMKFK 411
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Mesocricetus auratus (taxid: 10036) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|Q8HYE4|AL1A1_MACFA Retinal dehydrogenase 1 OS=Macaca fascicularis GN=ALDH1A1 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 459 bits (1182), Expect = e-128, Method: Compositional matrix adjust.
Identities = 217/396 (54%), Positives = 289/396 (72%), Gaps = 1/396 (0%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+I++TK+FIN E+ DSVSGK F +P T E + ++ EGDK DVD AVKAARQAF G P
Sbjct: 17 KIQYTKIFINNEWHDSVSGKKFPVFNPATEEELCQVEEGDKADVDKAVKAARQAFQIGSP 76
Query: 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K ADLIE +LA +E+++ GKL+S A + D+ G TLRY AG
Sbjct: 77 WRTMDASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGW 136
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKI G + + YT EPIGV G IIPWNFP M K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIQGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAE 196
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +
Sbjct: 197 QTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKE 256
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK V+LELGGKSP ++ D D++ A + A G+ +++G+ C+A+SR++V+E IY
Sbjct: 257 AAGKSNLKRVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIY 316
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376
DEF ++ VE+AK +++G+P P QGPQ+DK+Q+D+IL IE GK+EGA L GG P G
Sbjct: 317 DEFVRRSVERAKKYILGNPLTPGATQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWG 376
Query: 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
KGY+++PT+F+NVT++M IAK EIFGPV +MKFK
Sbjct: 377 NKGYFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFK 412
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Macaca fascicularis (taxid: 9541) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|Q8S528|AL2B7_ARATH Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 217/395 (54%), Positives = 282/395 (71%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW 77
+++ T+L I G FVD+VSGKTF T+DPR GE IA+++EGD EDV+ AV AAR+AFD GPW
Sbjct: 50 KVEHTQLLIGGRFVDAVSGKTFPTLDPRNGEVIAQVSEGDAEDVNRAVAAARKAFDEGPW 109
Query: 78 PRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 137
P+ + ER I+ +FADLIE+H + +A LE D GK + + ++P A RYYAG A
Sbjct: 110 PKMTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYEQSAQIEVPMLARVFRYYAGWA 169
Query: 138 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
DKIHG + TL EPIGV G IIPWNFP M K+ PALA G T+++K AEQ
Sbjct: 170 DKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLSWKLGPALACGNTVVLKTAEQ 229
Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
TPL AL L AG+PDGV+N+V GFG TAGAAIASHMD+DKV+FTGSTDVG+ +++
Sbjct: 230 TPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHMDVDKVAFTGSTDVGKIILEL 289
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
A+ SNLK V+LELGGKSP ++ +D DV+ A ++A + FN+G+ C A SR +V E +YD
Sbjct: 290 ASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERVYD 349
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 377
EF +K +A VGDPF + QGPQVD +QF++IL YI+HG GATL GG +G
Sbjct: 350 EFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFNKILKYIKHGVEAGATLQAGGDRLGS 409
Query: 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
KGYYI+PT+F++V +DMLIA +EIFGPV ++KFK
Sbjct: 410 KGYYIQPTVFSDVKDDMLIATDEIFGPVQTILKFK 444
|
Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 414 | ||||||
| 255546541 | 501 | aldehyde dehydrogenase, putative [Ricinu | 0.983 | 0.812 | 0.815 | 0.0 | |
| 356520525 | 501 | PREDICTED: aldehyde dehydrogenase family | 0.987 | 0.816 | 0.794 | 0.0 | |
| 255546535 | 501 | aldehyde dehydrogenase, putative [Ricinu | 0.983 | 0.812 | 0.783 | 0.0 | |
| 356531249 | 501 | PREDICTED: aldehyde dehydrogenase family | 0.987 | 0.816 | 0.784 | 0.0 | |
| 197312909 | 500 | alcohol dehydrogenase [Rheum australe] | 0.983 | 0.814 | 0.783 | 0.0 | |
| 356513129 | 502 | PREDICTED: aldehyde dehydrogenase family | 0.987 | 0.814 | 0.754 | 0.0 | |
| 356523743 | 501 | PREDICTED: aldehyde dehydrogenase family | 0.992 | 0.820 | 0.761 | 0.0 | |
| 357518719 | 503 | Aldehyde dehydrogenase [Medicago truncat | 0.983 | 0.809 | 0.759 | 0.0 | |
| 388495142 | 497 | unknown [Lotus japonicus] | 0.951 | 0.792 | 0.786 | 0.0 | |
| 356531251 | 499 | PREDICTED: aldehyde dehydrogenase family | 0.983 | 0.815 | 0.756 | 0.0 |
| >gi|255546541|ref|XP_002514330.1| aldehyde dehydrogenase, putative [Ricinus communis] gi|223546786|gb|EEF48284.1| aldehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/407 (81%), Positives = 368/407 (90%)
Query: 6 SNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAV 65
SNGS +S K+P IKFTKLFINGEFVDS SGKTFETIDPRTGEAIARIAEGDKED++LAV
Sbjct: 5 SNGSSESFIKIPTIKFTKLFINGEFVDSFSGKTFETIDPRTGEAIARIAEGDKEDIELAV 64
Query: 66 KAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPG 125
KA+R+AFDHGPWPR SG+ R IM++FADLI+E+ E LA L+ +D GKL S K DIP
Sbjct: 65 KASREAFDHGPWPRLSGSARARIMMRFADLIDENKEELAALDTIDGGKLFSGGKTVDIPS 124
Query: 126 AANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALA 185
AANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFP+ MFFMKV+PALA
Sbjct: 125 AANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPSLMFFMKVAPALA 184
Query: 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 245
AGCT IVKPAEQTPL AL++AHLAKLAG+PDGVLNVV G+GPTAGAAIASHMDID VSFT
Sbjct: 185 AGCTTIVKPAEQTPLSALFYAHLAKLAGLPDGVLNVVTGYGPTAGAAIASHMDIDMVSFT 244
Query: 246 GSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA 305
GST+VGR+VMQAAATSNLK VSLELGGKSPLLIFDD D+NTA+D+AL GIL+NKGE+CVA
Sbjct: 245 GSTEVGRKVMQAAATSNLKQVSLELGGKSPLLIFDDADINTASDLALFGILYNKGEVCVA 304
Query: 306 SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG 365
SSRVYVQEGIYDE KKLVEKAKAWVVGDPFDP V QGPQVDK+Q+++ILSYIEH K EG
Sbjct: 305 SSRVYVQEGIYDEIVKKLVEKAKAWVVGDPFDPKVHQGPQVDKQQYEKILSYIEHAKGEG 364
Query: 366 ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
ATLLTGGK + +KGYYIEPTIF ++ EDMLI K+EIFGPVM+LMKFK
Sbjct: 365 ATLLTGGKSLFEKGYYIEPTIFADLQEDMLIVKDEIFGPVMSLMKFK 411
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356520525|ref|XP_003528912.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/409 (79%), Positives = 365/409 (89%)
Query: 4 SLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDL 63
+LSNG S FKMP IKFTKLFINGEFVDS+SGK FETIDPRTGE I RIAEG KED+D+
Sbjct: 3 ALSNGHDASFFKMPSIKFTKLFINGEFVDSLSGKEFETIDPRTGEVITRIAEGAKEDIDV 62
Query: 64 AVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDI 123
AVKAAR AFD+GPWPR GAER IM+K+ADLI+++ E +A L+A+DAGKL+ W K DI
Sbjct: 63 AVKAARDAFDYGPWPRMPGAERAKIMMKWADLIDQNIEEIAALDAIDAGKLYHWCKAVDI 122
Query: 124 PGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183
P AANT+RYYAGAADKIHGEVLK SR YTL EPIGVVGHIIPWNFP+TMF KVSP+
Sbjct: 123 PAAANTIRYYAGAADKIHGEVLKASREFHAYTLLEPIGVVGHIIPWNFPSTMFVAKVSPS 182
Query: 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 243
LAAGCTM++KPAEQTPL AL++AHLAKLAG+PDGVLNVVPGFG TAGAAI+SHMDIDKVS
Sbjct: 183 LAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGQTAGAAISSHMDIDKVS 242
Query: 244 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEIC 303
FTGST+VGR+VM+AAA SNLKPVSLELGGKSP+++FDD DV+ AA +AL+GILFNKGEIC
Sbjct: 243 FTGSTEVGREVMRAAANSNLKPVSLELGGKSPVIVFDDADVDKAAGLALMGILFNKGEIC 302
Query: 304 VASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR 363
VA SRV VQEGIYDEFEKKLVEKA AWVVGDPFDP V+QGPQVDKKQF++ILSYIEHGK+
Sbjct: 303 VAGSRVLVQEGIYDEFEKKLVEKANAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKK 362
Query: 364 EGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
EGATLLTGGK +G KGYYIEPTIF+NV EDMLI ++EIFGPVMALMKFK
Sbjct: 363 EGATLLTGGKRVGNKGYYIEPTIFSNVKEDMLIVQDEIFGPVMALMKFK 411
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255546535|ref|XP_002514327.1| aldehyde dehydrogenase, putative [Ricinus communis] gi|223546783|gb|EEF48281.1| aldehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/407 (78%), Positives = 360/407 (88%)
Query: 6 SNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAV 65
SN S FK+P+IKFTKLFINGEFVDS+SGKTFET+DPR+GE I R+A+GDK DVDLAV
Sbjct: 5 SNERSDSFFKIPKIKFTKLFINGEFVDSISGKTFETVDPRSGEVITRVAQGDKGDVDLAV 64
Query: 66 KAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPG 125
KAAR AFD+GPWPR SG R I+++FAD+IEEH E LA ++ +DAGKL + K DIP
Sbjct: 65 KAARHAFDNGPWPRMSGFARGRILMEFADIIEEHIEELAAIDTIDAGKLFTMGKAADIPM 124
Query: 126 AANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALA 185
A N LRYYAGAADKIHG+VLKMSR LQGYTL EP+GVVGHIIPWNFPT MFFMKV+PALA
Sbjct: 125 AINLLRYYAGAADKIHGQVLKMSRELQGYTLHEPVGVVGHIIPWNFPTNMFFMKVAPALA 184
Query: 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 245
AGCTM+VKPAEQTPL ALY+AHLAK AG+PDGV+NV+ GFGPTAGAAIASHMDIDKVSFT
Sbjct: 185 AGCTMVVKPAEQTPLSALYYAHLAKQAGIPDGVINVITGFGPTAGAAIASHMDIDKVSFT 244
Query: 246 GSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA 305
GST+VGR++MQAAATSNLK VSLELGGKSPLLIFDD D++TA D+ALLGIL+NKGE+CVA
Sbjct: 245 GSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADIDTAVDLALLGILYNKGEVCVA 304
Query: 306 SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG 365
SSRVYVQEGIYDE KKL +KAK WVVGDPFDP R GPQVDK+QFD+IL YIEHGK+EG
Sbjct: 305 SSRVYVQEGIYDELVKKLEKKAKDWVVGDPFDPISRLGPQVDKQQFDKILYYIEHGKKEG 364
Query: 366 ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
ATLLTGGKP G KGYY+ PTIFT+V EDM+IAK+EIFGPVM+LMKFK
Sbjct: 365 ATLLTGGKPSGNKGYYLHPTIFTDVKEDMMIAKDEIFGPVMSLMKFK 411
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356531249|ref|XP_003534190.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/409 (78%), Positives = 363/409 (88%)
Query: 4 SLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDL 63
+LSNG S FKMP IKFTKLFINGEFVDS+SG+ FET DPRTGE I RIAEG KEDVD+
Sbjct: 3 ALSNGHGSSFFKMPPIKFTKLFINGEFVDSLSGREFETRDPRTGEVITRIAEGAKEDVDV 62
Query: 64 AVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDI 123
AVKAAR AFD+GPWPR GAER IM+K+ADL++++ E +A L+A+DAGKL+ W K DI
Sbjct: 63 AVKAARAAFDYGPWPRMPGAERAKIMMKWADLVDQNIEEIAALDAIDAGKLYHWCKAVDI 122
Query: 124 PGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183
P AA+T+RYYAGAADKIHGEVLK SR YTL EPIGVVGHIIPWNFP+TMF KVSP+
Sbjct: 123 PAAASTIRYYAGAADKIHGEVLKASREFHAYTLLEPIGVVGHIIPWNFPSTMFVAKVSPS 182
Query: 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 243
LAAGCTM++KPAEQTPL AL++AHLAKLAG+PDGVLNVVPGFG TAG AI+ HMDIDKVS
Sbjct: 183 LAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGQTAGVAISLHMDIDKVS 242
Query: 244 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEIC 303
FTGST+VGR+VM+AAA SNLKPVSLELGGKSP+++FDD DV+ AA++ALLGILFNKGEIC
Sbjct: 243 FTGSTEVGREVMRAAANSNLKPVSLELGGKSPVIVFDDADVDKAAELALLGILFNKGEIC 302
Query: 304 VASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR 363
VA SRV VQEGIYDEFEKKLVEKAKAWVVGDPFDP V+QGPQVDKKQF++ILSYIE GK+
Sbjct: 303 VAGSRVLVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEQGKK 362
Query: 364 EGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
EGATLLTGGK +G KGYYIEPTIF+NV EDMLI ++EIFGPVMALMKFK
Sbjct: 363 EGATLLTGGKRVGNKGYYIEPTIFSNVKEDMLIVQDEIFGPVMALMKFK 411
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|197312909|gb|ACH63235.1| alcohol dehydrogenase [Rheum australe] | Back alignment and taxonomy information |
|---|
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/407 (78%), Positives = 360/407 (88%)
Query: 6 SNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAV 65
SNG + F++PEIKFTKLFINGEFVDSVSGKTFET DPR GE IA +AEGDKEDVDLAV
Sbjct: 4 SNGKTEIKFQLPEIKFTKLFINGEFVDSVSGKTFETRDPRNGEVIAEVAEGDKEDVDLAV 63
Query: 66 KAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPG 125
KAAR+AFDHGPWPR SG +R IM+K ADLIE+H E LA ++++DAGKL K+ DIPG
Sbjct: 64 KAAREAFDHGPWPRMSGYQRGRIMMKLADLIEQHLEELAAIDSMDAGKLFHIGKIIDIPG 123
Query: 126 AANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALA 185
AA+TLRYYAGAADKIHGE LKMSR QGYTLREP GVVGHIIPWNFPTTMFF KV+PALA
Sbjct: 124 AAHTLRYYAGAADKIHGETLKMSREFQGYTLREPAGVVGHIIPWNFPTTMFFAKVAPALA 183
Query: 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 245
AGCTM+VKPAEQTPL ALY+AHLA LAG+P+GVLNVV GFGPTAGAA+ SHMD+DKVSFT
Sbjct: 184 AGCTMVVKPAEQTPLSALYYAHLANLAGIPEGVLNVVSGFGPTAGAALTSHMDVDKVSFT 243
Query: 246 GSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA 305
GS +VGR VMQAAATSNLK VSLELGGKSPL+IFDD DV+ AA++AL+GILFNKGE+CVA
Sbjct: 244 GSPEVGRLVMQAAATSNLKQVSLELGGKSPLIIFDDADVDKAAELALVGILFNKGEVCVA 303
Query: 306 SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG 365
SSRV+VQ GIYD +KLVE AK W VGDPFDP+V+QGPQVDK QFDRILSYIEHGKREG
Sbjct: 304 SSRVFVQGGIYDAVVEKLVEMAKNWPVGDPFDPSVQQGPQVDKVQFDRILSYIEHGKREG 363
Query: 366 ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
ATLLTGG P+G KGYYI+PTIF +V ++M+IAK+EIFGPV++LMKFK
Sbjct: 364 ATLLTGGNPLGDKGYYIQPTIFADVMDNMMIAKDEIFGPVLSLMKFK 410
|
Source: Rheum australe Species: Rheum australe Genus: Rheum Family: Polygonaceae Order: Caryophyllales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356513129|ref|XP_003525266.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/411 (75%), Positives = 366/411 (89%), Gaps = 2/411 (0%)
Query: 4 SLSNG--SCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDV 61
+ +NG + SL K+P + FTKLFI+G FV SVSGKTFETIDPRTG+ IARI+EGDKED+
Sbjct: 2 TFNNGDAAAASLNKVPTVNFTKLFIDGHFVHSVSGKTFETIDPRTGDVIARISEGDKEDI 61
Query: 62 DLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG 121
D+AVKAAR AFD+GPWPR G+ER I+LK+A+LIEE+AE LA L+A+DAGKL+ +
Sbjct: 62 DIAVKAARHAFDNGPWPRLPGSERGRILLKWAELIEENAEELAALDAIDAGKLYHMCRNL 121
Query: 122 DIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181
++P AANTLRYYAGAADKIHGEVLKMSR YTL EP+GVVGHI PWNFP TMF++KV+
Sbjct: 122 EVPAAANTLRYYAGAADKIHGEVLKMSRDFHAYTLLEPLGVVGHITPWNFPNTMFYIKVA 181
Query: 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDK 241
P+LAAGCTM++KPAEQTPL AL+ AHLAKLAG+PDGV+NVVPGFGPTAGAA++SHMD+DK
Sbjct: 182 PSLAAGCTMVLKPAEQTPLSALFNAHLAKLAGIPDGVINVVPGFGPTAGAALSSHMDVDK 241
Query: 242 VSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGE 301
VSFTGST GR++MQAAA SNLK VSLELGGKSPL+IFDD D++ AA++ALLGIL+NKGE
Sbjct: 242 VSFTGSTQTGREIMQAAAKSNLKQVSLELGGKSPLIIFDDADIDKAAELALLGILYNKGE 301
Query: 302 ICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHG 361
+CVASSRV VQEGIYDEFEKKLVEKAKAWVVGDPFDP V+QGPQVDK+QF+++LSYIEHG
Sbjct: 302 VCVASSRVLVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKEQFEKVLSYIEHG 361
Query: 362 KREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
K+EGATLLTGGK +G KGY+IEPTIF+N+ EDMLIA++EIFGPVMAL KFK
Sbjct: 362 KKEGATLLTGGKTVGNKGYFIEPTIFSNIREDMLIAQDEIFGPVMALKKFK 412
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356523743|ref|XP_003530494.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/411 (76%), Positives = 369/411 (89%)
Query: 4 SLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDL 63
SL+NG SL K+P IKFTKLFING+FVDS+SGKTFETIDPRTG+ IARI+EGDKED+D+
Sbjct: 3 SLTNGDAGSLNKVPTIKFTKLFINGDFVDSLSGKTFETIDPRTGDVIARISEGDKEDIDI 62
Query: 64 AVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDI 123
AVKAAR AFD+GPWPR G+ER I+LK+A++IEE+AE LA L+A+DAGKL+ + ++
Sbjct: 63 AVKAARHAFDNGPWPRLPGSERARILLKWAEIIEENAEELAALDAIDAGKLYHMCRNVEV 122
Query: 124 PGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183
P AANTLRYYAGAADKIHGEVLKMSR YTL EP+GVVGHI PWNFP TMF++KV+P+
Sbjct: 123 PAAANTLRYYAGAADKIHGEVLKMSREFHAYTLLEPLGVVGHITPWNFPNTMFYIKVAPS 182
Query: 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 243
LAAGCTM++KPAEQTPL AL+ AHLAKLAG+PDGV+NVVPGFGPTAGAA++SHMD+DKVS
Sbjct: 183 LAAGCTMVLKPAEQTPLSALFSAHLAKLAGIPDGVINVVPGFGPTAGAALSSHMDVDKVS 242
Query: 244 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEIC 303
FTGST GR +MQAAA SNLK VSLELGGKSPL+IFDD D++ A ++ALLGIL+NKGE+C
Sbjct: 243 FTGSTQTGRVIMQAAAKSNLKQVSLELGGKSPLIIFDDADIDKATELALLGILYNKGEVC 302
Query: 304 VASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR 363
VASSRV+VQEGIYDEFEKKLVEKAKAWVVGDPFDP V+QGPQVDK+QF+++LSYIEHGK+
Sbjct: 303 VASSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKEQFEKVLSYIEHGKK 362
Query: 364 EGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKIS 414
EGATLLTGGK +G KGY+IEPTIF+N+ EDMLIA++EIFGPVMAL KFK +
Sbjct: 363 EGATLLTGGKTVGNKGYFIEPTIFSNIREDMLIAQDEIFGPVMALKKFKTT 413
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357518719|ref|XP_003629648.1| Aldehyde dehydrogenase [Medicago truncatula] gi|357521043|ref|XP_003630810.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355523670|gb|AET04124.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355524832|gb|AET05286.1| Aldehyde dehydrogenase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/407 (75%), Positives = 357/407 (87%)
Query: 6 SNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAV 65
SNG SLFKMP IK+ KLFING+FVDSVSG TFETIDPRTG+ IARI+EG KED+++AV
Sbjct: 7 SNGDNSSLFKMPTIKYNKLFINGDFVDSVSGSTFETIDPRTGDVIARISEGAKEDIEIAV 66
Query: 66 KAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPG 125
KAAR+AFD GPWPR SG ER IM+KFA+LI+E+ E LA L+A+DAGK++ K +IP
Sbjct: 67 KAAREAFDSGPWPRMSGVERAKIMMKFAELIDENIEELATLDAIDAGKVYFINKAFEIPS 126
Query: 126 AANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALA 185
AANTLRYYAGAADKIHGEVLK S YTL EPIGVVGHIIPWN PT +FF KVSP+LA
Sbjct: 127 AANTLRYYAGAADKIHGEVLKSSGQFHAYTLMEPIGVVGHIIPWNAPTMVFFTKVSPSLA 186
Query: 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 245
AGCTM++KPAEQTPL AL++AHLAKLAG+P+GVLNVVPGFGPTAGAAI+SHMDID VSFT
Sbjct: 187 AGCTMVLKPAEQTPLSALFYAHLAKLAGIPNGVLNVVPGFGPTAGAAISSHMDIDVVSFT 246
Query: 246 GSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA 305
GS +VGR++MQAAA SNLK VSLELGGKSPL+IFDD D++ A ++ALLGIL NKGEICVA
Sbjct: 247 GSVEVGREIMQAAAKSNLKHVSLELGGKSPLIIFDDADIDKAVELALLGILANKGEICVA 306
Query: 306 SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG 365
SRV+VQEGIYD+ EKKLVEKAKAWV+GDPFDP +QGPQ D+ QF++I+SYIEHGKREG
Sbjct: 307 CSRVFVQEGIYDQVEKKLVEKAKAWVIGDPFDPKTQQGPQADRNQFEKIISYIEHGKREG 366
Query: 366 ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
ATLLTGG+ +G +GYYIEPTIF+NV EDMLIA++EIFGPVMALMKFK
Sbjct: 367 ATLLTGGRRVGSQGYYIEPTIFSNVKEDMLIAQDEIFGPVMALMKFK 413
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388495142|gb|AFK35637.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/394 (78%), Positives = 351/394 (89%)
Query: 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP 78
+KFTKLFING+FVDSVSG+TF TIDPRTG+ IA I+EG KED+D+AVKAARQAFD GPWP
Sbjct: 14 VKFTKLFINGDFVDSVSGRTFVTIDPRTGDVIASISEGTKEDIDIAVKAARQAFDSGPWP 73
Query: 79 RFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD 138
R GAER IM+K ADLI+E+ E LA L+A+DAGKL+ K DIPGAA TLRY+AGAAD
Sbjct: 74 RLPGAERAKIMMKLADLIDENTEELAALDAIDAGKLYHMCKAMDIPGAAKTLRYFAGAAD 133
Query: 139 KIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 198
KIHGEVLK+SR L YTL EP+GVVGHIIPWNFP + FF KVSPALAAGCTM++KPAEQT
Sbjct: 134 KIHGEVLKVSRELHAYTLMEPVGVVGHIIPWNFPASFFFTKVSPALAAGCTMVLKPAEQT 193
Query: 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
PL AL+ AHLAKLAG+PDGVLNVVPGFG TAGAA++SHMDID VSFTGST GR+VM+AA
Sbjct: 194 PLSALFCAHLAKLAGIPDGVLNVVPGFGSTAGAAVSSHMDIDAVSFTGSTQTGREVMKAA 253
Query: 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318
A+SNLK VSLELGGKSPL+IF+D D++ AA++AL GIL NKGE+CVASSRV+VQEGIYDE
Sbjct: 254 ASSNLKRVSLELGGKSPLIIFNDADIDKAAELALYGILLNKGEVCVASSRVFVQEGIYDE 313
Query: 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK 378
FEKKLVEKAKAWVVGDPFDP V+QGPQVDKKQF++ILSYIEHGKREGATLLTGGK +G K
Sbjct: 314 FEKKLVEKAKAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKREGATLLTGGKSVGNK 373
Query: 379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
GYYIEPTIF+NV EDMLI ++EIFGPVMAL KFK
Sbjct: 374 GYYIEPTIFSNVKEDMLIVQDEIFGPVMALKKFK 407
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356531251|ref|XP_003534191.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/407 (75%), Positives = 354/407 (86%)
Query: 6 SNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAV 65
SNG S FK+P +KFTKLFING FVDS+SG FETIDPRTGE IARIAEG KED+DLAV
Sbjct: 3 SNGYPASSFKIPTVKFTKLFINGHFVDSLSGGEFETIDPRTGEVIARIAEGTKEDIDLAV 62
Query: 66 KAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPG 125
KA+R AFDHGPWPR ER IM+K+ADLI++H E +A L+A+DAGKL+ K +IP
Sbjct: 63 KASRLAFDHGPWPRMPAVERARIMMKWADLIDQHVEEIAALDAIDAGKLYHMLKAIEIPA 122
Query: 126 AANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALA 185
ANT+RYYAGAADKIHGEVLK +R YTL EP+GVVGHIIPWNFP+ MF KVSP LA
Sbjct: 123 TANTIRYYAGAADKIHGEVLKPAREFHAYTLLEPVGVVGHIIPWNFPSIMFVSKVSPCLA 182
Query: 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 245
AGCTM++KPAEQTPL AL++AHLAKLAG+PDGVLNVVPGFG TAGAAI S MDIDKVSFT
Sbjct: 183 AGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGATAGAAICSDMDIDKVSFT 242
Query: 246 GSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA 305
GST+VGR+VM+AAA SNLKPVSLELGGKSP +IFDD D++ A ++AL+ +++NKGE+C A
Sbjct: 243 GSTEVGREVMRAAANSNLKPVSLELGGKSPFIIFDDADLDKAVELALMAVVYNKGEVCAA 302
Query: 306 SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG 365
SRV+VQEGIYDEFEK+LVEKAKAWVVGDPFDP V+QGPQVDKKQF++ILSYIEHGKREG
Sbjct: 303 GSRVFVQEGIYDEFEKRLVEKAKAWVVGDPFDPNVQQGPQVDKKQFEKILSYIEHGKREG 362
Query: 366 ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
ATLLTGGK +G KGYYIEPTIF+NV EDMLIA++EIFGPV+ALMKFK
Sbjct: 363 ATLLTGGKRVGNKGYYIEPTIFSNVKEDMLIAQDEIFGPVIALMKFK 409
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 414 | ||||||
| TAIR|locus:505006369 | 501 | ALDH2C4 "AT3G24503" [Arabidops | 0.985 | 0.814 | 0.688 | 7.9e-149 | |
| UNIPROTKB|P27463 | 509 | ALDH1A1 "Retinal dehydrogenase | 0.954 | 0.776 | 0.527 | 1.5e-108 | |
| TAIR|locus:2097845 | 538 | ALDH2B4 "AT3G48000" [Arabidops | 0.951 | 0.732 | 0.520 | 3e-108 | |
| UNIPROTKB|P00352 | 501 | ALDH1A1 "Retinal dehydrogenase | 0.954 | 0.788 | 0.520 | 1.3e-107 | |
| UNIPROTKB|J9P9J4 | 484 | ALDH1A1 "Uncharacterized prote | 0.949 | 0.811 | 0.525 | 3.5e-107 | |
| MGI|MGI:1353450 | 501 | Aldh1a1 "aldehyde dehydrogenas | 0.954 | 0.788 | 0.517 | 7.2e-107 | |
| UNIPROTKB|P48644 | 501 | ALDH1A1 "Retinal dehydrogenase | 0.954 | 0.788 | 0.520 | 9.2e-107 | |
| RGD|2087 | 501 | Aldh1a1 "aldehyde dehydrogenas | 0.954 | 0.788 | 0.515 | 3.1e-106 | |
| UNIPROTKB|J9NS92 | 501 | ALDH1A1 "Uncharacterized prote | 0.954 | 0.788 | 0.521 | 6.5e-106 | |
| UNIPROTKB|E2RMX7 | 496 | ALDH1A1 "Uncharacterized prote | 0.944 | 0.788 | 0.520 | 1.7e-105 |
| TAIR|locus:505006369 ALDH2C4 "AT3G24503" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1453 (516.5 bits), Expect = 7.9e-149, P = 7.9e-149
Identities = 283/411 (68%), Positives = 324/411 (78%)
Query: 5 LSNGSCK--SLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVD 62
+ NG C + K+PEIKFTKLFING+F+D+ SGKTFETIDPR GE IA IAEGDKEDVD
Sbjct: 1 MENGKCNGATTVKLPEIKFTKLFINGQFIDAASGKTFETIDPRNGEVIATIAEGDKEDVD 60
Query: 63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGD 122
LAV AAR AFDHGPWPR +G ER ++ KFAD GKL K D
Sbjct: 61 LAVNAARYAFDHGPWPRMTGFERAKLINKFADLIEENIEELAKLDAVDGGKLFQLGKYAD 120
Query: 123 IPGAANTLRYYAGAADKIHGEVLKMSR-ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181
IP A RY AGAADKIHGE LKM+R +L GYTL+EPIGVVG+IIPWNFP+ MF KV+
Sbjct: 121 IPATAGHFRYNAGAADKIHGETLKMTRQSLFGYTLKEPIGVVGNIIPWNFPSIMFATKVA 180
Query: 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDK 241
PA+AAGCTM+VKPAEQT L AL++AHL+K AG+PDGVLN+V GFG TAGAAIASHMD+DK
Sbjct: 181 PAMAAGCTMVVKPAEQTSLSALFYAHLSKEAGIPDGVLNIVTGFGSTAGAAIASHMDVDK 240
Query: 242 VSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGE 301
VSFTGSTDVGR++MQAAA SNLK VSLELGGKSPLLIF+D D++ AAD+ALLG +NKGE
Sbjct: 241 VSFTGSTDVGRKIMQAAAASNLKKVSLELGGKSPLLIFNDADIDKAADLALLGCFYNKGE 300
Query: 302 ICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHG 361
ICVASSRV+VQEGIYD+ +KLVEKAK W VGDPFD RQGPQVDK+QF++ILSYIEHG
Sbjct: 301 ICVASSRVFVQEGIYDKVVEKLVEKAKDWTVGDPFDSTARQGPQVDKRQFEKILSYIEHG 360
Query: 362 KREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
K EGATLLT +PTIF +VTEDM I ++EIFGPVM+LMKFK
Sbjct: 361 KNEGATLLTGGKAIGDKGYFIQPTIFADVTEDMKIYQDEIFGPVMSLMKFK 411
|
|
| UNIPROTKB|P27463 ALDH1A1 "Retinal dehydrogenase 1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 209/396 (52%), Positives = 270/396 (68%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+IK+TK+FIN E+ DSVSGK FE +P E I +AEGDK D+D AVKAAR+AF+ G P
Sbjct: 25 KIKYTKIFINNEWHDSVSGKKFEVFNPANEEKICEVAEGDKADIDKAVKAARKAFELGSP 84
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K AD GKL S A + D+ T+RY AG
Sbjct: 85 WRTMDASERGRLLNKLADLVERDRLTLATMEAIDGGKLFSTAYLMDLGACIKTIRYCAGW 144
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKIHG + M +T EP+GV G IIPWNFP MF K++PAL G T++VKPAE
Sbjct: 145 ADKIHGRTVPMDGNFFTFTRHEPVGVCGQIIPWNFPLVMFIWKIAPALCCGNTVVVKPAE 204
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL ALY L K AG P GV+N+VPGFGPTAGAAI+ HMDIDKVSFTGST+VG+ + +
Sbjct: 205 QTPLSALYMGSLIKEAGFPPGVVNIVPGFGPTAGAAISHHMDIDKVSFTGSTEVGKLIKE 264
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA +NLK V+LELGGKSP +IF D D++ AA+ A +G+ +++G+ C+A SR++V+E IY
Sbjct: 265 AAGKTNLKRVTLELGGKSPNIIFADADLDEAAEFAHIGLFYHQGQCCIAGSRIFVEEPIY 324
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXX 376
DEF ++ +E+AK + +GDP P V+QGPQ+DK+QF +IL IE GK+EGA L
Sbjct: 325 DEFVRRSIERAKKYTLGDPLLPGVQQGPQIDKEQFQKILDLIESGKKEGAKLECGGGPWG 384
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+PT+F+NVT+DM IAK EIFGPV +MKFK
Sbjct: 385 NKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFK 420
|
|
| TAIR|locus:2097845 ALDH2B4 "AT3G48000" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1070 (381.7 bits), Expect = 3.0e-108, P = 3.0e-108
Identities = 205/394 (52%), Positives = 264/394 (67%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW 77
++ T+L ING FVDS SGKTF T+DPRTGE IA +AEGD ED++ AVKAAR AFD GPW
Sbjct: 54 QVSHTQLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEGPW 113
Query: 78 PRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAA 137
P+ S ER ++L+FAD GK + + +IP A RYYAG A
Sbjct: 114 PKMSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWA 173
Query: 138 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
DKIHG + Q +TL EPIGV G IIPWNFP MF KV PALA G T+++K AEQ
Sbjct: 174 DKIHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 233
Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
TPL A Y L AG+P GVLN+V GFG TAGAA+ASHMD+DK++FTGSTD G+ ++
Sbjct: 234 TPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVILGL 293
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
AA SNLKPV+LELGGKSP ++F+D D++ A ++A + FN+G+ C A SR +V E +YD
Sbjct: 294 AANSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYD 353
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXX 377
EF +K +A VVGDPF + QGPQ+D KQF++++ YI+ G ATL
Sbjct: 354 EFVEKSKARALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQIGD 413
Query: 378 XXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
+PT+F+NV +DMLIA++EIFGPV +++KF
Sbjct: 414 KGYFIQPTVFSNVKDDMLIAQDEIFGPVQSILKF 447
|
|
| UNIPROTKB|P00352 ALDH1A1 "Retinal dehydrogenase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 206/396 (52%), Positives = 271/396 (68%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+I++TK+FIN E+ DSVSGK F +P T E + ++ EGDKEDVD AVKAARQAF G P
Sbjct: 17 KIQYTKIFINNEWHDSVSGKKFPVFNPATEEELCQVEEGDKEDVDKAVKAARQAFQIGSP 76
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K AD GKL+S A + D+ G TLRY AG
Sbjct: 77 WRTMDASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGW 136
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKI G + + YT EPIGV G IIPWNFP M K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIQGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAE 196
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +
Sbjct: 197 QTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKE 256
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK V+LELGGKSP ++ D D++ A + A G+ +++G+ C+A+SR++V+E IY
Sbjct: 257 AAGKSNLKRVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIY 316
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXX 376
DEF ++ VE+AK +++G+P P V QGPQ+DK+Q+D+IL IE GK+EGA L
Sbjct: 317 DEFVRRSVERAKKYILGNPLTPGVTQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWG 376
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+PT+F+NVT++M IAK EIFGPV +MKFK
Sbjct: 377 NKGYFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFK 412
|
|
| UNIPROTKB|J9P9J4 ALDH1A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1060 (378.2 bits), Expect = 3.5e-107, P = 3.5e-107
Identities = 207/394 (52%), Positives = 271/394 (68%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWP 78
K+TK+FIN E+ +SVSGK F +P T E I + EGDKED+D AVKAARQAF G PW
Sbjct: 19 KYTKIFINNEWHNSVSGKKFPVFNPATEEKICEVEEGDKEDIDKAVKAARQAFQIGSPWR 78
Query: 79 RFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAAD 138
+ +ER ++ K AD GKL S + D+ G TLRY AG AD
Sbjct: 79 TMNASERGRLIYKLADLIERDRLLLATMESINGGKLFSNSYTLDLGGCVATLRYCAGWAD 138
Query: 139 KIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 198
KIHG + + GYT EPIGV G IIPWNFP MF K+ PAL G T++VKPAEQT
Sbjct: 139 KIHGRTIPVDGNFFGYTRHEPIGVCGQIIPWNFPLFMFIWKIGPALCCGNTVVVKPAEQT 198
Query: 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
PL AL+ A L + AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +AA
Sbjct: 199 PLTALHVASLIQEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKMIKEAA 258
Query: 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318
SNLK V+LELGGKSP ++F D D+++A ++A + +++G+ C+A+SR++V+E IYDE
Sbjct: 259 GKSNLKRVTLELGGKSPFIVFADSDLDSAVEVAHQALFYHQGQCCIAASRLFVEESIYDE 318
Query: 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXX 378
F ++ VE+AK +V+G+P P V QGPQ+DKKQ+++IL IE GK+EGA L
Sbjct: 319 FVRRSVERAKKYVLGNPLTPGVSQGPQIDKKQYEKILDLIESGKKEGAKLECGGGPWGNK 378
Query: 379 XXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+PT+F+NVT++M IAK EIFGPV +MKFK
Sbjct: 379 GFFIQPTVFSNVTDEMRIAKEEIFGPVQQIMKFK 412
|
|
| MGI|MGI:1353450 Aldh1a1 "aldehyde dehydrogenase family 1, subfamily A1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1057 (377.1 bits), Expect = 7.2e-107, P = 7.2e-107
Identities = 205/396 (51%), Positives = 270/396 (68%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+I+ TK+FIN E+ +SVSGK F ++P T E I + EGDK DVD AVKAARQAF G P
Sbjct: 17 KIQHTKIFINNEWHNSVSGKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSP 76
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K AD GK+ + A + D+ G L+Y AG
Sbjct: 77 WRTMDASERGRLLNKLADLMERDRLLLATMEALNGGKVFANAYLSDLGGCIKALKYCAGW 136
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKIHG+ + + YT REPIGV G IIPWNFP MF K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIHGQTIPSDGDIFTYTRREPIGVCGQIIPWNFPMLMFIWKIGPALSCGNTVVVKPAE 196
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST VG+ + +
Sbjct: 197 QTPLTALHLASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKE 256
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK V+LELGGKSP ++F D D++ A + A G+ +++G+ CVA+SR++V+E +Y
Sbjct: 257 AAGKSNLKRVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVY 316
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXX 376
DEF K+ VE+AK +V+G+P P + QGPQ+DK+Q D+IL IE GK+EGA L
Sbjct: 317 DEFVKRSVERAKKYVLGNPLTPGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWG 376
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+PT+F+NVT++M IAK EIFGPV +MKFK
Sbjct: 377 NKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFK 412
|
|
| UNIPROTKB|P48644 ALDH1A1 "Retinal dehydrogenase 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1056 (376.8 bits), Expect = 9.2e-107, P = 9.2e-107
Identities = 206/396 (52%), Positives = 268/396 (67%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+ K+TK+FIN E+ SVSGK F +P T E + + EGDKEDVD AVKAARQAF G P
Sbjct: 17 QFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSP 76
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K AD GKL S A + D+ G TLRY AG
Sbjct: 77 WRTMDASERGRLLNKLADLIERDHLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGW 136
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKI G + M YT EP+GV G IIPWNFP MF K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAE 196
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL AL+ L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +
Sbjct: 197 QTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKE 256
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK VSLELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IY
Sbjct: 257 AAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIY 316
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXX 376
DEF ++ VE+AK +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L
Sbjct: 317 DEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWG 376
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+PT+F++VT+DM IAK EIFGPV +MKFK
Sbjct: 377 NKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFK 412
|
|
| RGD|2087 Aldh1a1 "aldehyde dehydrogenase 1 family, member A1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
Identities = 204/396 (51%), Positives = 270/396 (68%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+I+ TK+FIN E+ DSVSGK F ++P T E I + EGDK DVD AVKAARQAF G P
Sbjct: 17 KIQHTKIFINNEWHDSVSGKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSP 76
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K AD GK+ + A + D+ G+ L+Y AG
Sbjct: 77 WRTMDASERGRLLNKLADLMERDRLLLATIEAINGGKVFANAYLSDLGGSIKALKYCAGW 136
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKIHG+ + + +T REPIGV G IIPWNFP MF K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIHGQTIPSDGDIFTFTRREPIGVCGQIIPWNFPLLMFIWKIGPALSCGNTVVVKPAE 196
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST VG+ + +
Sbjct: 197 QTPLTALHMASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKE 256
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK V+LELGGKSP ++F D D++ A + A G+ +++G+ CVA+SR++V+E +Y
Sbjct: 257 AAGKSNLKRVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVY 316
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXX 376
DEF +K VE+AK +V+G+P + QGPQ+DK+Q D+IL IE GK+EGA L
Sbjct: 317 DEFVRKSVERAKKYVLGNPLTQGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWG 376
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+PT+F+NVT++M IAK EIFGPV +MKFK
Sbjct: 377 NKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFK 412
|
|
| UNIPROTKB|J9NS92 ALDH1A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
Identities = 207/397 (52%), Positives = 272/397 (68%)
Query: 18 EIK-FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG- 75
+IK F+ +FIN E+ +SVSGK F +P T E I + EGDKED+D AVKAARQAF G
Sbjct: 16 KIKLFSLIFINNEWHNSVSGKKFPVFNPATEEKICEVEEGDKEDIDKAVKAARQAFQIGS 75
Query: 76 PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAG 135
PW + +ER ++ K AD GKL S + D+ G TLRY AG
Sbjct: 76 PWRTMNASERGRLIYKLADLIERDRLLLATMESINGGKLFSNSYTLDLGGCVATLRYCAG 135
Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
ADKIHG + + GYT EPIGV G IIPWNFP MF K+ PAL G T++VKPA
Sbjct: 136 WADKIHGRTIPVDGNFFGYTRHEPIGVCGQIIPWNFPLFMFIWKIGPALCCGNTVVVKPA 195
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
EQTPL AL+ A L + AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ +
Sbjct: 196 EQTPLTALHVASLIQEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKMIK 255
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
+AA SNLK V+LELGGKSP ++F D D+++A ++A + +++G+ C+A+SR++V+E I
Sbjct: 256 EAAGKSNLKRVTLELGGKSPFIVFADSDLDSAVEVAHQALFYHQGQCCIAASRLFVEESI 315
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXX 375
YDEF ++ VE+AK +V+G+P P V QGPQ+DKKQ+++IL IE GK+EGA L
Sbjct: 316 YDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKKQYEKILDLIESGKKEGAKLECGGGPW 375
Query: 376 XXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+PT+F+NVT++M IAK EIFGPV +MKFK
Sbjct: 376 GNKGFFIQPTVFSNVTDEMRIAKEEIFGPVQQIMKFK 412
|
|
| UNIPROTKB|E2RMX7 ALDH1A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
Identities = 204/392 (52%), Positives = 269/392 (68%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRF 80
+++FIN E+ +SVSGK F +P T E I + EGDKED+D AVKAARQAF G PW
Sbjct: 16 SQIFINNEWHNSVSGKKFPVFNPATEEKICEVEEGDKEDIDKAVKAARQAFQIGSPWRTM 75
Query: 81 SGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
+ +ER ++ K AD GKL S + D+ G TLRY AG ADKI
Sbjct: 76 NASERGRLIYKLADLIERDRLLLATMESINGGKLFSNSYTLDLGGCVATLRYCAGWADKI 135
Query: 141 HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
HG + + GYT EPIGV G IIPWNFP MF K+ PAL G T++VKPAEQTPL
Sbjct: 136 HGRTIPVDGNFFGYTRHEPIGVCGQIIPWNFPLFMFIWKIGPALCCGNTVVVKPAEQTPL 195
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
AL+ A L + AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +AA
Sbjct: 196 TALHVASLIQEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKMIKEAAGK 255
Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
SNLK V+LELGGKSP ++F D D+++A ++A + +++G+ C+A+SR++V+E IYDEF
Sbjct: 256 SNLKRVTLELGGKSPFIVFADSDLDSAVEVAHQALFYHQGQCCIAASRLFVEESIYDEFV 315
Query: 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXX 380
++ VE+AK +V+G+P P V QGPQ+DKKQ+++IL IE GK+EGA L
Sbjct: 316 RRSVERAKKYVLGNPLTPGVSQGPQIDKKQYEKILDLIESGKKEGAKLECGGGPWGNKGF 375
Query: 381 XXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+PT+F+NVT++M IAK EIFGPV +MKFK
Sbjct: 376 FIQPTVFSNVTDEMRIAKEEIFGPVQQIMKFK 407
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P51647 | AL1A1_RAT | 1, ., 2, ., 1, ., 3, 6 | 0.5429 | 0.9541 | 0.7884 | yes | no |
| P41751 | ALDH_ASPNG | 1, ., 2, ., 1, ., 3 | 0.5475 | 0.9347 | 0.7786 | yes | no |
| P00352 | AL1A1_HUMAN | 1, ., 2, ., 1, ., 3, 6 | 0.5530 | 0.9541 | 0.7884 | yes | no |
| P15437 | AL1A1_HORSE | 1, ., 2, ., 1, ., 3, 6 | 0.5454 | 0.9541 | 0.79 | yes | no |
| Q56YU0 | AL2C4_ARATH | 1, ., 2, ., 1, ., 3 | 0.7347 | 0.9855 | 0.8143 | yes | no |
| P48644 | AL1A1_BOVIN | 1, ., 2, ., 1, ., 3, 6 | 0.5580 | 0.9541 | 0.7884 | yes | no |
| P08157 | ALDH_EMENI | 1, ., 2, ., 1, ., 3 | 0.5396 | 0.9637 | 0.8028 | yes | no |
| O14293 | YF19_SCHPO | 1, ., 2, ., 1, ., - | 0.5307 | 0.9371 | 0.7713 | yes | no |
| P24549 | AL1A1_MOUSE | 1, ., 2, ., 1, ., 3, 6 | 0.5479 | 0.9541 | 0.7884 | yes | no |
| Q27640 | ALDH_ENCBU | 1, ., 2, ., 1, ., 3 | 0.5382 | 0.9613 | 0.8008 | N/A | no |
| Q2XQV4 | ALDH2_PIG | 1, ., 2, ., 1, ., 3 | 0.5288 | 0.9613 | 0.7639 | yes | no |
| Q8MI17 | AL1A1_RABIT | 1, ., 2, ., 1, ., 3, 6 | 0.5656 | 0.9541 | 0.7963 | yes | no |
| P27463 | AL1A1_CHICK | 1, ., 2, ., 1, ., 3, 6 | 0.5656 | 0.9541 | 0.7760 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.2.1 | 0.963 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 414 | |||
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 0.0 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 0.0 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 0.0 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 0.0 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 0.0 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 0.0 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 0.0 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 1e-180 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-165 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 1e-164 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 1e-164 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 1e-162 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 1e-162 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 1e-162 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 1e-154 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-150 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 1e-150 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 1e-146 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 1e-146 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 1e-145 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 1e-144 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 1e-144 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-143 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-138 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 1e-138 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-137 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 1e-137 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 1e-135 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 1e-135 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 1e-134 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-131 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-130 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 1e-129 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 1e-126 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-121 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 1e-121 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-120 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-119 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 1e-118 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 1e-117 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 1e-116 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 1e-115 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-114 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 1e-111 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 1e-111 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 1e-109 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 1e-108 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 1e-108 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 1e-107 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 1e-106 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 1e-106 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 1e-102 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 1e-100 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 6e-99 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 1e-95 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 9e-95 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 1e-94 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 2e-91 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 3e-90 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 1e-89 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 2e-89 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 3e-89 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 3e-88 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 5e-87 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 1e-85 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 8e-85 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 9e-84 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 4e-82 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 8e-82 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 1e-80 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 3e-77 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 3e-77 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 4e-69 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 1e-67 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 4e-67 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 2e-65 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 1e-63 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 1e-61 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 1e-60 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 2e-57 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 1e-56 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 1e-55 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 1e-55 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 4e-55 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 1e-52 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 2e-52 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 3e-52 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 8e-51 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 7e-50 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 5e-49 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 2e-48 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 3e-45 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 5e-45 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 2e-44 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 2e-44 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 3e-42 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 4e-41 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 1e-38 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 1e-38 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 5e-36 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 8e-35 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 5e-30 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 2e-29 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 8e-24 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 1e-23 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 6e-21 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 1e-20 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 6e-18 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 3e-16 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 2e-09 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 4e-08 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 6e-07 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 2e-06 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 1e-05 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 8e-05 | |
| PRK15398 | 465 | PRK15398, PRK15398, aldehyde dehydrogenase EutE; P | 4e-04 | |
| TIGR02518 | 488 | TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase ( | 0.002 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 798 bits (2062), Expect = 0.0
Identities = 339/410 (82%), Positives = 367/410 (89%)
Query: 3 GSLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVD 62
GS N S K+PEIKFTKLFINGEFVD+ SGKTFET DPRTGE IARIAEGDKEDVD
Sbjct: 2 GSNGNCGGASGVKVPEIKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVD 61
Query: 63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGD 122
LAVKAAR+AFDHGPWPR SG ER IM+KFADLIEEH E LA L+ +DAGKL + K D
Sbjct: 62 LAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVD 121
Query: 123 IPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182
IP AA LRYYAGAADKIHGE LKMSR LQGYTL+EPIGVVGHIIPWNFP+TMFFMKV+P
Sbjct: 122 IPAAAGLLRYYAGAADKIHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAP 181
Query: 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKV 242
ALAAGCTM+VKPAEQTPL AL++AHLAKLAGVPDGV+NVV GFGPTAGAAIASHMD+DKV
Sbjct: 182 ALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKV 241
Query: 243 SFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEI 302
SFTGST+VGR++MQAAATSNLK VSLELGGKSPLLIFDD DV+ A D+ALLGI +NKGEI
Sbjct: 242 SFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEI 301
Query: 303 CVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGK 362
CVASSRVYVQEGIYDEF KKLVEKAK WVVGDPFDP RQGPQVDK+QF++ILSYIEHGK
Sbjct: 302 CVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGK 361
Query: 363 REGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
REGATLLTGGKP G KGYYIEPTIFT+VTEDM IA++EIFGPVM+LMKFK
Sbjct: 362 REGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFK 411
|
Length = 501 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 645 bits (1666), Expect = 0.0
Identities = 253/394 (64%), Positives = 304/394 (77%)
Query: 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP 78
+K TKLFING+FVD+ SGKTF TIDPR GE IA +AEGD EDVD AVKAAR+AFD GPWP
Sbjct: 1 VKHTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWP 60
Query: 79 RFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD 138
R +G ER I+L+FADL+E+HA+ LA LE D GK + A+ ++P AA RYYAG AD
Sbjct: 61 RMTGYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWAD 120
Query: 139 KIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 198
KIHG L YTL EPIGVVG IIPWNFP MF KV PALA G T+++KPAEQT
Sbjct: 121 KIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQT 180
Query: 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
PL AL A LA AG+PDGVLN+V GFGPTAGAAIASHMD+DKV+FTGST+VG+ +MQ A
Sbjct: 181 PLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLA 240
Query: 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318
A SNLKPV+LELGGKSP ++ +D DV+ A ++A + FN+G+ C A SR +V E IYDE
Sbjct: 241 AKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDE 300
Query: 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK 378
F +K +A VVGDPF V QGPQVDK+QF++ILSYIEHGK EGATL+TGG IG K
Sbjct: 301 FVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSK 360
Query: 379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
GYYI+PTIF++V +DM IA++EIFGPV +++KFK
Sbjct: 361 GYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFK 394
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 638 bits (1647), Expect = 0.0
Identities = 239/391 (61%), Positives = 292/391 (74%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
T LFIN EFVDSVSGKTF TI+P T E I ++AE D+EDVD AVKAAR AF+ G W +
Sbjct: 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMD 63
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
ER ++ K ADLIE + LA LE+LD GK + GD+ + LRYYAG ADKI
Sbjct: 64 PRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQ 123
Query: 142 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
G+ + + YT REPIGV G IIPWNFP M K++PALAAG T+++KPAEQTPL
Sbjct: 124 GKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLS 183
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
ALY A L K AG P GV+N+VPGFGPTAGAAI+SHMD+DK++FTGST VGR +M+AAA S
Sbjct: 184 ALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKS 243
Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
NLK V+LELGGKSP ++FDD D++ A + A GI FN+G+ C A SR++VQE IYDEF +
Sbjct: 244 NLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVE 303
Query: 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYY 381
K +A+ VVGDPFDP QGPQV K QFD+ILSYIE GK+EGATLLTGG+ G KGY+
Sbjct: 304 KFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYF 363
Query: 382 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
I+PT+FT+V +DM IAK EIFGPV+ ++KFK
Sbjct: 364 IQPTVFTDVKDDMKIAKEEIFGPVVTILKFK 394
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 599 bits (1547), Expect = 0.0
Identities = 237/397 (59%), Positives = 287/397 (72%), Gaps = 1/397 (0%)
Query: 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG- 75
PEIK+TK+FIN E+ DSVSGKTF TI+P TGE I + EGDK DVD AVKAAR AF G
Sbjct: 2 PEIKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGS 61
Query: 76 PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
PW +ER ++ K ADLIE LA LE LD GK S + + D+PGA LRYYAG
Sbjct: 62 PWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAG 121
Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
ADKIHG+ + M YT EP+GV G IIPWNFP M K++PALA G T+++KPA
Sbjct: 122 WADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPA 181
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
EQTPL ALY A L K AG P GV+NVVPG+GPTAGAAI+SH DIDKV+FTGST+VG+ +
Sbjct: 182 EQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQ 241
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
QAA SNLK V+LELGGKSP ++F D D++ A + A + FN G+ C A SR +VQE I
Sbjct: 242 QAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESI 301
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375
YDEF K+ VE+AK VVG+PFDP QGPQ+D++QF +IL IE GK+EGA L GGK
Sbjct: 302 YDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRH 361
Query: 376 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
G KGY+I+PT+F++VT+DM IAK EIFGPV + KFK
Sbjct: 362 GDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFK 398
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 545 bits (1406), Expect = 0.0
Identities = 231/399 (57%), Positives = 290/399 (72%), Gaps = 8/399 (2%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW 77
++ +T+L ING+FVD+ SGKTF T+DPRTGE IA +AEGD EDV+ AV AAR+AFD GPW
Sbjct: 54 QVSYTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPW 113
Query: 78 PRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 137
P+ + ER I+L+FADL+E+H + LA LE D GK + + ++P A RYYAG A
Sbjct: 114 PKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWA 173
Query: 138 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
DKIHG + TL EPIGV G IIPWNFP MF KV PALA G T+++K AEQ
Sbjct: 174 DKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 233
Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
TPL ALY A L AG+P GVLNVV GFGPTAGAA+ASHMD+DK++FTGSTD G+ V++
Sbjct: 234 TPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLEL 293
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
AA SNLKPV+LELGGKSP ++ +D DV+ A ++A + FN+G+ C A SR +V E +YD
Sbjct: 294 AAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYD 353
Query: 318 EFEKKLVEKAKA----WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 373
EF VEKAKA VVGDPF V QGPQ+D +QF++IL YI+ G GATL GG
Sbjct: 354 EF----VEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGD 409
Query: 374 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
G KGYYI+PT+F+NV +DMLIA++EIFGPV +++KFK
Sbjct: 410 RFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFK 448
|
Length = 538 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 533 bits (1376), Expect = 0.0
Identities = 203/383 (53%), Positives = 264/383 (68%), Gaps = 5/383 (1%)
Query: 30 FVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIM 89
+VDS S +T E I+P TGE IA + EDVD AV AAR AF W + +ER I+
Sbjct: 1 WVDS-SSETIEVINPATGEVIATVPAATAEDVDAAVAAARAAFK--AWAKTPPSERAAIL 57
Query: 90 LKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR 149
LK ADL+EE + LA LE L+ GK + A+ G++P A +TLRYYAG A K+ GE L
Sbjct: 58 LKAADLLEERRDELAELETLETGKPLAEAR-GEVPRAIDTLRYYAGLARKLEGETLPSDP 116
Query: 150 ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA 209
+ YT REP+GVVG I PWNFP + K++PALAAG T+++KP+E TPL AL A L
Sbjct: 117 GVLAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELF 176
Query: 210 KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE 269
+ AG+P GVLNVV G G G A+ H D+DKVSFTGST+VGR++ +AAA NLK V+LE
Sbjct: 177 EEAGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAA-KNLKRVTLE 235
Query: 270 LGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA 329
LGGK+PL++FDD D++ A + A+ G N G++C A SR+ V E IYDEF ++LVE AK+
Sbjct: 236 LGGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKS 295
Query: 330 WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTN 389
VGDP DP GP + KKQ +R+LSYIE K EGA LL GG+ +KGY++EPT+ +
Sbjct: 296 LKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVLAD 355
Query: 390 VTEDMLIAKNEIFGPVMALMKFK 412
VT DM IA+ EIFGPV++++ FK
Sbjct: 356 VTPDMRIAQEEIFGPVLSVIPFK 378
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 527 bits (1360), Expect = 0.0
Identities = 200/380 (52%), Positives = 262/380 (68%), Gaps = 3/380 (0%)
Query: 36 GKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL 95
G+TF TI+P TG +A +A D DVD AV AAR+AF+ G W R S AER+ ++L+ ADL
Sbjct: 1 GETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADL 60
Query: 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYT 155
IE H + LA+LE LD GK S A D+P AANT R+YA A DK++GEV
Sbjct: 61 IEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALI 120
Query: 156 LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 215
REP+GVVG ++PWNFP M K++PALAAG ++++KPAEQ+PL AL A LA AG+P
Sbjct: 121 TREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGLP 180
Query: 216 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP 275
GVLNVVPGFG TAG A+ HMD+D ++FTGST+VGR+ ++ + SNLK V LE GGKSP
Sbjct: 181 AGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSP 240
Query: 276 LLIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334
++F D D++ AA+ A GI +N+GE+C A SR+ V E I DEF +K+V A+ W GD
Sbjct: 241 NIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGD 300
Query: 335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK--KGYYIEPTIFTNVTE 392
P DPA R G V + FD++L YIE GK EGA L+ GGK + G+++EPT+F VT
Sbjct: 301 PLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTP 360
Query: 393 DMLIAKNEIFGPVMALMKFK 412
DM IA+ EIFGPV++++ F
Sbjct: 361 DMRIAREEIFGPVLSVITFD 380
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 516 bits (1330), Expect = 0.0
Identities = 226/392 (57%), Positives = 280/392 (71%), Gaps = 2/392 (0%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR-F 80
T LFINGEFVDSV G T + +P TG+ I +IAE + DVD+AV+ A AF+ W
Sbjct: 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFE-TDWGLKV 65
Query: 81 SGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
SG++R + K ADL+E + + LA +EALD GK AK D+ +A+T RYY G ADKI
Sbjct: 66 SGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKI 125
Query: 141 HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
HG+V++ YT EPIGV G IIPWNFP M K++PALAAG T+++KP+E TPL
Sbjct: 126 HGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPL 185
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
ALY L AG P GV+NVV G+G T G AI+SHMDIDKV+FTGST VGR+VM+AAA
Sbjct: 186 SALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK 245
Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
SNLK V+LELGGKSP ++FDD D+ +A GI FN G++C A SR+YVQEGIYD+F
Sbjct: 246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFV 305
Query: 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY 380
K+ EKAK VGDPF QGPQV + Q++RI+SYIE GK EGAT+ TGGK G +GY
Sbjct: 306 KRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGY 365
Query: 381 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+IEPTIFT+VTEDM I K EIFGPV+A++KFK
Sbjct: 366 FIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFK 397
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 511 bits (1318), Expect = e-180
Identities = 211/395 (53%), Positives = 275/395 (69%), Gaps = 6/395 (1%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
T LFIN EFV S G+T +T++P TGE IA + +EDVD AVKAAR+AF+ W + +
Sbjct: 8 TGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFE-SWWSKVT 66
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
G ER ++ K ADL+E++ ++LA +EALD+GK + +GD+ +RYYAG ADKI
Sbjct: 67 GEERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQ 126
Query: 142 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
G+ + S YTL EP GV G IIPWN+P M K++PALAAG T+++KPAE TPL
Sbjct: 127 GKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLS 186
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
LYFA+L K AG P GV+N++PG+G AG+A+A H D+DK++FTGST GR VM+AAA
Sbjct: 187 LLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAA-Q 245
Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
NLK V+LE GGKSP L+F+D D++ A A GI++N G+ C A+SR+YVQE IYD+F +
Sbjct: 246 NLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVE 305
Query: 322 KLVEKAK-AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG---KPIGK 377
K VE K + VG PFD GPQV K Q+DR+LSYIE GK+EGA L+ GG
Sbjct: 306 KFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLG 365
Query: 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
KGY+I PTIFT+V +DM I K EIFGPV+ + KFK
Sbjct: 366 KGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFK 400
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 470 bits (1212), Expect = e-165
Identities = 198/391 (50%), Positives = 258/391 (65%), Gaps = 8/391 (2%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
KL I+GE+VD S T E I+P TGE IA + EDVD AV AAR AF+ W R S
Sbjct: 1 YKLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE--AWSRLS 56
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
ER I+ + ADL+E AE LA L L+ GK S A+ G+I AA+ +RYYA A ++
Sbjct: 57 AEERAAILRRIADLLEARAEELAALITLETGKPISEAR-GEIARAADFIRYYAEEARRLE 115
Query: 142 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
GE + + + REP+GVVG I PWNFP + K++PALAAG T+++KP+EQTPL
Sbjct: 116 GETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLS 175
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
AL A LA AG+P GVLNVV G G G A+ +H D+D +SFTGST VGR + AAA +
Sbjct: 176 ALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAA-A 234
Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
NLKPV+LELGGKSP ++ +D D++ A D A+ G FN G+ C A+SR+ V E +YDEF +
Sbjct: 235 NLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVE 294
Query: 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYY 381
+LV +A + VGDP DP+ GP + ++Q DR+ YIE EGA LL GGK G GY+
Sbjct: 295 RLVARAASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPG--GYF 352
Query: 382 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+EPTI VT DM IA+ EIFGPV+ +++FK
Sbjct: 353 VEPTILEGVTPDMRIAREEIFGPVLPVIRFK 383
|
Length = 472 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 468 bits (1207), Expect = e-164
Identities = 174/378 (46%), Positives = 238/378 (62%), Gaps = 9/378 (2%)
Query: 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
+I+P TGE AR+ E DVD AV AAR AF+ G W + + ER ++ + ADLIE +A
Sbjct: 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANA 60
Query: 101 EVLAVLEALDAGKLHSWAKM-GDIPGAANTLRYYAGAADKIHGEVLKMSRA-LQGYTLRE 158
E LA LE D GKL + + A RYYAG ADKI G V+ + + +T RE
Sbjct: 61 EELAELETRDNGKL--IRETRAQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRRE 118
Query: 159 PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV 218
P+GVV I PWN P + K++PALAAG T+++KP+E TP L A LA+ AG P GV
Sbjct: 119 PLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGV 178
Query: 219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278
+NVV GFGP G A+ H + K++FTG T+ GR + +AAA NL PV+LELGGKSP ++
Sbjct: 179 VNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAA-ENLAPVTLELGGKSPNIV 237
Query: 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338
FDD D++ A + + GI G+ CVA SR+ VQ IYDEF ++LV +A+A VGDP DP
Sbjct: 238 FDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDP 297
Query: 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDM 394
+ GP ++Q +++ Y+ + EGA +LTGG+ GY+ EPTI +VT DM
Sbjct: 298 ETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDM 357
Query: 395 LIAKNEIFGPVMALMKFK 412
IA+ E+FGPV++++ F
Sbjct: 358 RIAQEEVFGPVLSVIPFD 375
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 468 bits (1206), Expect = e-164
Identities = 179/376 (47%), Positives = 243/376 (64%), Gaps = 7/376 (1%)
Query: 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
+P TGE +A++ EG +VD AV AA++AF W R S AER I+ K ADLIE A
Sbjct: 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPG--WSRMSPAERARILHKVADLIEARA 58
Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPI 160
+ LA+LE+LD GK + A+ DIP AA R++A ++ GE Y LR+P+
Sbjct: 59 DELALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPV 118
Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 220
GV G I PWN P + K++PALA G T+++KP+E TPL A A LA AG+P GV+N
Sbjct: 119 GVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVN 178
Query: 221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280
VV GFGP AGAA+ +H D+D +SFTG T GR +M+AAA NLKPVSLELGGK+P ++F
Sbjct: 179 VVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAA-PNLKPVSLELGGKNPNIVFA 237
Query: 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340
D D++ A D A+ N GE+C+A SR+ VQ IYDEF ++ VE+AKA VGDP DP
Sbjct: 238 DADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDT 297
Query: 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLI 396
GP + K+ +++L Y+E + EGAT+LTGG + GY++EPT+ T + D +
Sbjct: 298 EVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRV 357
Query: 397 AKNEIFGPVMALMKFK 412
A+ EIFGPV+ ++ F
Sbjct: 358 AQEEIFGPVVTVIPFD 373
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 463 bits (1193), Expect = e-162
Identities = 198/372 (53%), Positives = 257/372 (69%), Gaps = 3/372 (0%)
Query: 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
T++P TGE IAR+A+ EDVD AV AAR AF+ W AER I+ + A+LI +A
Sbjct: 1 TLNPATGELIARVAQASAEDVDAAVAAARAAFE--AWSAMDPAERGRILWRLAELILANA 58
Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPI 160
+ LA LE+LD GK A+ D+P AA+T RYYAG ADKI GEV+ + YT+REP+
Sbjct: 59 DELARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPV 118
Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 220
GVVG I+PWNFP KV+PALAAG T+++KPAE TPL AL A L AG P GVLN
Sbjct: 119 GVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLN 178
Query: 221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280
VV GFG AGAA+ H D+DK++FTGST VGR++MQ AA NLK VSLELGGKS ++F
Sbjct: 179 VVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAA-GNLKRVSLELGGKSANIVFA 237
Query: 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340
D D++ A A GI +N+G++C A SR+ V E IYDEF ++ A++ GDP DP
Sbjct: 238 DADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKT 297
Query: 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNE 400
+ GP V + QFDR+L Y++ G+ EGA LLTGGK G +G+++EPTIF V +M IA+ E
Sbjct: 298 QMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEE 357
Query: 401 IFGPVMALMKFK 412
IFGPV+++M+F+
Sbjct: 358 IFGPVVSVMRFR 369
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 464 bits (1196), Expect = e-162
Identities = 184/392 (46%), Positives = 248/392 (63%), Gaps = 6/392 (1%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
+I+GE+V++ SGKT + I+P GE IA + EG ED A+ AAR+AFD G WP E
Sbjct: 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQE 60
Query: 85 RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
R ++ + AD I E AE LA LE L+ GK ++ DI AN RYYAG A K GEV
Sbjct: 61 RAALLFRIADKIREDAEELARLETLNTGKTLRESE-IDIDDVANCFRYYAGLATKETGEV 119
Query: 145 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 204
+ + T+REP+GV G I PWN+P K++PALAAG T+++KP+E TPL +
Sbjct: 120 YDVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIA 179
Query: 205 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 264
L + AG+P GV+N+V G G T GA +A D+D VSFTG T GR +M+AAA N+K
Sbjct: 180 LFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAA-GNVK 238
Query: 265 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 324
V+LELGGK+P ++F D D TA D AL G+ FN G++C A SR+ V+E I+D+F L
Sbjct: 239 KVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALA 298
Query: 325 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIGK---KGY 380
E+AK +G+ D GP V + +++LSYI+ GK EGA L+ GGK P G KGY
Sbjct: 299 ERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGY 358
Query: 381 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
++EPTIF +V M I + EIFGPV+ + +F
Sbjct: 359 FVEPTIFDDVDRTMRIVQEEIFGPVLTVERFD 390
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 462 bits (1191), Expect = e-162
Identities = 185/353 (52%), Positives = 235/353 (66%), Gaps = 6/353 (1%)
Query: 62 DLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG 121
D AV AAR AF W AER I+ K ADL+EE E LA LE L+ GK A G
Sbjct: 1 DAAVAAARAAFKA--WAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEAL-G 57
Query: 122 DIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180
++ AA+T RYYAG A ++HGEV+ REP+GVVG I PWNFP + K+
Sbjct: 58 EVARAADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKL 117
Query: 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDID 240
+PALAAG T+++KP+E TPL AL A L AG+P GVLNVV G G GAA+ASH +D
Sbjct: 118 APALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVD 177
Query: 241 KVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 300
K+SFTGST VG+ +M+AAA NLK V+LELGGKSPL++FDD D++ A A+ G N G
Sbjct: 178 KISFTGSTAVGKAIMRAAA-ENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAG 236
Query: 301 EICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH 360
++C A+SR+ V E IYDEF ++LVE+ KA VG+P DP GP + Q DR+L+YIE
Sbjct: 237 QVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIED 296
Query: 361 GKREGATLLTGGKPI-GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
K EGA LL GGK + G KGY++ PT+ T+V DM IA+ EIFGPV+ ++ FK
Sbjct: 297 AKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFK 349
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 444 bits (1144), Expect = e-154
Identities = 186/402 (46%), Positives = 268/402 (66%), Gaps = 8/402 (1%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
KMP +LFINGEFVD+ GKT+ TI+P G I +++ EDVD AV AA++AF++
Sbjct: 3 KMP----HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFEN 58
Query: 75 GPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 134
G W + + +R +M + ADL+EEH E LA +E+LD+G +++ A + + T RY+A
Sbjct: 59 GEWGKMNARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFA 118
Query: 135 GAADKIHGEVLKMSRALQG----YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTM 190
G DKI G+ + +++A T REPIGV G +IPWN+P M K++ LAAG T+
Sbjct: 119 GWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTV 178
Query: 191 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 250
++KPA+ TPL AL FA L AG P GV+N++PG G G ++ H D+ K+ FTGST +
Sbjct: 179 VLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPI 238
Query: 251 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 310
G+ +M++ A SNLK VSLELGGKSPL+IF D D++ A M + + FNKGE C+A+ R++
Sbjct: 239 GKHIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLF 298
Query: 311 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 370
V+E I+DEF +++VE+ K +GDP D + GPQ K D+++ Y E G +EGATL+
Sbjct: 299 VEESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVY 358
Query: 371 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
GGK + + G++ EPT+FT+V + M IAK E FGP+M + KF
Sbjct: 359 GGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFD 400
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 433 bits (1116), Expect = e-150
Identities = 176/400 (44%), Positives = 242/400 (60%), Gaps = 8/400 (2%)
Query: 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
M L+I+G +V++ SG+TFE I+P TGE +A + DV+ AV +A+Q
Sbjct: 1 MSRQPLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQ--K 58
Query: 76 PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
W + ER I+ + D++ E + LA LE LD GK + DI A+ L YYAG
Sbjct: 59 IWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAG 118
Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
A + GE + + YT REP+GV I WN+P + K +PALAAG MI KP+
Sbjct: 119 LAPALEGEQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPS 178
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
E TPL AL A + AG+PDGV NVV G G GA + H DI KVSFTG G++VM
Sbjct: 179 EVTPLTALKLAEIYTEAGLPDGVFNVVQGDGRV-GAWLTEHPDIAKVSFTGGVPTGKKVM 237
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
AAA S LK V++ELGGKSPL++FDD D++ AAD+A+L ++ G++C +RV+VQ+ I
Sbjct: 238 AAAAAS-LKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSI 296
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375
FE +L+E+ + +GDP DPA GP V D++L YIE GK EGA LL GG+ +
Sbjct: 297 KAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERL 356
Query: 376 ----GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
G ++ PT+FT+ T+DM I + EIFGPVM+++ F
Sbjct: 357 TEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTF 396
|
Length = 488 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 433 bits (1115), Expect = e-150
Identities = 192/401 (47%), Positives = 244/401 (60%), Gaps = 17/401 (4%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
FINGE+V G+ F+ +P G+ + I EDVDLAV AA +AF W + S
Sbjct: 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFK--TWGKTSV 59
Query: 83 AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
AER I+ K AD IEE+ E+LAV E LD GK DIP A + RY+AG G
Sbjct: 60 AERANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEG 119
Query: 143 EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
+ ++ Y EP+GVVG IIPWNFP M K++PALAAG T+++KPA QTPL
Sbjct: 120 SLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSI 179
Query: 203 LYFAHLAKLAG--VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
L L +L G +P GV+NVV GFG AG +ASH I K++FTGST VGR +MQ AA
Sbjct: 180 LV---LMELIGDLLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAA- 235
Query: 261 SNLKPVSLELGGKSPLLIFDDV-----DVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
NL PV+LELGGKSP + FDD D + A+ LG FN+GE+C SR VQE I
Sbjct: 236 ENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESI 295
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-- 373
YDEF ++ VE+ +A VG+P DP G QV K Q ++ILSY++ GK EGA +LTGG+
Sbjct: 296 YDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERL 355
Query: 374 --PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
KGY+ EPT+ DM I + EIFGPV+A++ FK
Sbjct: 356 TLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFK 396
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 423 bits (1090), Expect = e-146
Identities = 177/374 (47%), Positives = 236/374 (63%), Gaps = 9/374 (2%)
Query: 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
DP TGE ARIA G DVD AV+AAR+AF+ W R S AER ++L+ A LI EHA+
Sbjct: 2 FDPSTGEVFARIARGGAADVDRAVQAARRAFE-SGWLRLSPAERGRLLLRIARLIREHAD 60
Query: 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIG 161
LA LE+LD GK + A+ D+ AA YY GAADK+HGE + + YT+REP G
Sbjct: 61 ELARLESLDTGKPLTQAR-ADVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHG 119
Query: 162 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNV 221
V GHIIPWN+P + V+PALAAG ++VKPAE PL AL A LA+ AG+P G LNV
Sbjct: 120 VTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNV 179
Query: 222 VPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDD 281
V G G AGAA+ +H +D +SFTGS + G VM+AAA N+ PV+LELGGKSP ++F D
Sbjct: 180 VTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAA-ENVVPVTLELGGKSPQIVFAD 238
Query: 282 VDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF-DPAV 340
D+ A + + I+ N G+ C A SR+ V IYDE ++LVE+ +A VG DP +
Sbjct: 239 ADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLEDPDL 298
Query: 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI---GKKGYYIEPTIFTNVTEDMLIA 397
GP + KQ DR+ ++ + GA ++ GG+ GY++ PT+ +V D +A
Sbjct: 299 --GPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLA 356
Query: 398 KNEIFGPVMALMKF 411
+ EIFGPV+A+M F
Sbjct: 357 QEEIFGPVLAVMPF 370
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 423 bits (1090), Expect = e-146
Identities = 166/391 (42%), Positives = 230/391 (58%), Gaps = 5/391 (1%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
LFI G +V +T + + P T E + R+ E DVD AV AAR+AFD+GPWPR S A
Sbjct: 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPA 60
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
ER ++ + AD +E A+ LA L + G SW++ PG A LRYYA A E
Sbjct: 61 ERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFE 120
Query: 144 VLKMSRAL-QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
+ REP+GVV I+PWN P + +K++PALAAGCT+++KP+ +TPL A
Sbjct: 121 ERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDA 180
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
A A+ AG+P GV+NVVP G + H +DKVSFTGST GR++
Sbjct: 181 YLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCG-ER 238
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
L V+LELGGKS ++ DD D++ A + L N G++CVA +R+ V YDE +
Sbjct: 239 LARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEA 298
Query: 323 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIG-KKGY 380
L A VGDP DPA + GP +Q +R+ YI G+ EGA L+TGG P G +G+
Sbjct: 299 LAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGW 358
Query: 381 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
++EPT+F +V DM IA+ EIFGPV++++ +
Sbjct: 359 FVEPTLFADVDNDMRIAQEEIFGPVLSVIPY 389
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 421 bits (1084), Expect = e-145
Identities = 178/378 (47%), Positives = 234/378 (61%), Gaps = 10/378 (2%)
Query: 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
I+P T I I EDVD AV+AAR+AF W + +GAER + A+ + E
Sbjct: 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPR--WKKTTGAERAKYLRAIAEGVRERR 58
Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH---GEVLKM-SRALQGYTL 156
E LA LEA D GK A D+ A YYA A+++ + + S +
Sbjct: 59 EELAELEARDNGKPLDEA-AWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVR 117
Query: 157 REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 216
REP+GVVG I PWNFP M KV+PALAAGCT+++KP+E T L L A +A AG+P
Sbjct: 118 REPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPP 177
Query: 217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL 276
GVLNVV G G AGA +A+H IDK+SFTGST G QVMQAAA ++KPVSLELGGKSP+
Sbjct: 178 GVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAA-QDIKPVSLELGGKSPI 236
Query: 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336
++FDD D+ A + A+ G +N G+IC A+SR+ V E I D F ++L A+A VGDP
Sbjct: 237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPL 296
Query: 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK--PIGKKGYYIEPTIFTNVTEDM 394
+ VR GP V + Q++++LS+I GK EGA LL GG+ +KGY+I PT+F +V D
Sbjct: 297 EEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDS 356
Query: 395 LIAKNEIFGPVMALMKFK 412
I + EIFGPV+ + F
Sbjct: 357 RIWREEIFGPVLCVRSFA 374
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 417 bits (1076), Expect = e-144
Identities = 161/372 (43%), Positives = 232/372 (62%), Gaps = 5/372 (1%)
Query: 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
I+P TGE I + + D D A+ AA AF W + + ER I+ ++ADLI E AE
Sbjct: 2 INPATGEVIGEVPDAGAADADAAIDAAAAAFK--TWRKTTARERAAILRRWADLIRERAE 59
Query: 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA-LQGYTLREPI 160
LA L L+ GK + A+ G++ AA+ L ++A A +I+G + + +++P+
Sbjct: 60 DLARLLTLEQGKPLAEAR-GEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPV 118
Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 220
GVV I PWNFP M K++PALAAGCT+++KPAE+TPL AL A LA+ AG+P GVLN
Sbjct: 119 GVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLN 178
Query: 221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280
VV G G A+ + + K+SFTGST VG+ +M AA +K VSLELGG +P ++FD
Sbjct: 179 VVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAA-DTVKRVSLELGGNAPFIVFD 237
Query: 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340
D D++ A D A+ N G+ CV ++R+YV E IYDEF +KLVE+ K VG+ D
Sbjct: 238 DADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGT 297
Query: 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNE 400
GP ++++ +++ + +E +GA +LTGGK +G GY+ EPT+ T+VT+DMLI E
Sbjct: 298 DMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEE 357
Query: 401 IFGPVMALMKFK 412
FGPV ++ F
Sbjct: 358 TFGPVAPIIPFD 369
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 417 bits (1074), Expect = e-144
Identities = 159/392 (40%), Positives = 225/392 (57%), Gaps = 12/392 (3%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
+I+G +V +T + I+P T E I + G DVD AV AAR+AF W S
Sbjct: 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP--AWSATSVE 58
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
ER ++ + A+ E A+ LA L+ G + A+ + LR A A
Sbjct: 59 ERAALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDF--- 115
Query: 144 VLKMSRALQGYTL-REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
+ + REPIGV G I PWN+P +KV+PALAAGCT+++KP+E PL A
Sbjct: 116 --EFEERRGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSA 173
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
+ A + AG+P GV N+V G GP G A+++H D+D VSFTGST G++V +AAA +
Sbjct: 174 IILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADT- 232
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
+K V+LELGGKS +I DD D+ A + N G+ C A +R+ V Y E E+
Sbjct: 233 VKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEI 292
Query: 323 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG--KPIG-KKG 379
A+A+VVGDP DPA GP QFDR+ YI+ G EGA L+ GG +P G ++G
Sbjct: 293 AAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERG 352
Query: 380 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
Y+++PT+F +VT DM IA+ EIFGPV++++ +
Sbjct: 353 YFVKPTVFADVTPDMTIAREEIFGPVLSIIPY 384
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 415 bits (1069), Expect = e-143
Identities = 184/371 (49%), Positives = 242/371 (65%), Gaps = 4/371 (1%)
Query: 44 PRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL 103
P G +AR AEG EDVD AV AAR+AFD GPWPR SGAER ++LK ADLI E L
Sbjct: 4 PAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERL 63
Query: 104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGV 162
A++E L++GK S A G+I GAA+ RY A A +HG+ + + G LREPIGV
Sbjct: 64 ALIETLESGKPISQA-RGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGV 122
Query: 163 VGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVV 222
VG I PWNFP + K+ ALAAGCT++VKP+E T L A L AG+P GV+N+V
Sbjct: 123 VGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIV 182
Query: 223 PGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV 282
G+G T G A+ H D+D VSFTGST VG+ + AAA NLK VSLELGGK+P ++F D
Sbjct: 183 TGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAA-RNLKKVSLELGGKNPQIVFADA 241
Query: 283 DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQ 342
D++ AAD + G+ FN GE C + SR+ V E I D F +V +++ VGDP DP +
Sbjct: 242 DLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKV 301
Query: 343 GPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPTIFTNVTEDMLIAKNEI 401
G +++ Q +I Y++ G+ EGATLL GG+ + G + +PTIFT+VT DM IA+ EI
Sbjct: 302 GAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEI 361
Query: 402 FGPVMALMKFK 412
FGPV++++ F
Sbjct: 362 FGPVLSVLTFD 372
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 403 bits (1038), Expect = e-138
Identities = 189/394 (47%), Positives = 257/394 (65%), Gaps = 8/394 (2%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
LFINGE+V SG+T ++ +P GE ++ I + DVD AVKAA++AF W + +
Sbjct: 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFK--TWRKTTV 59
Query: 83 AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
AER I+ K AD+I+E+ E+LA++E LD GK + DIP AA+ RY+AG G
Sbjct: 60 AERANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEG 119
Query: 143 EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
+ LREPIGVVG IIPWNFP M K++PALAAG T+++KP+ T L
Sbjct: 120 SANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSL 179
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
L A + + +P GV+N+V G G +G + +H +DK++FTGST+VGR V AAA
Sbjct: 180 LELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAA-KK 237
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
L P +LELGGKS +IFDD + + A + A LGILFN+G++C A SR++VQEGIYDEF K
Sbjct: 238 LIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAK 297
Query: 323 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK----K 378
L EK + VG+P DP + G QV+K Q D+ILSY++ K EGA +LTGG + + K
Sbjct: 298 LKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDK 357
Query: 379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
G++IEPT+ NVT DM +A+ EIFGPV ++KFK
Sbjct: 358 GFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFK 391
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 403 bits (1037), Expect = e-138
Identities = 163/398 (40%), Positives = 222/398 (55%), Gaps = 17/398 (4%)
Query: 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRF 80
TKL INGE V G+ +P TGE +A IAE VD AV AA AF W +
Sbjct: 2 QTKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPE--WSQT 58
Query: 81 SGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
+ ER +LK AD IEE+A+ A LE+L+ GK A +IP + R++AGAA +
Sbjct: 59 TPKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCL 118
Query: 141 HGEVLKMSRA---LQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194
G A L+G+T R+P+GVV I PWN+P M K++PALAAG T+++KP
Sbjct: 119 EG-----KAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKP 173
Query: 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254
+E TPL AL A LA +P GVLNVV G G T G A+ H + VS TGS G+ V
Sbjct: 174 SEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHV 232
Query: 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
+ AAA ++K LELGGK+P+++FDD D++ + +N G+ C A+ R+Y Q G
Sbjct: 233 LSAAA-DSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRG 291
Query: 315 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGK 373
IYD+ KL VGDP D GP + DR+ ++E K G ++TGG+
Sbjct: 292 IYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGE 351
Query: 374 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
KGYY EPT+ +D I + E+FGPV+++ F
Sbjct: 352 APDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPF 389
|
Length = 475 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 402 bits (1034), Expect = e-137
Identities = 181/400 (45%), Positives = 242/400 (60%), Gaps = 13/400 (3%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH---GPWPR 79
+LFI GE+ + V GK ++P T E I I EDVD AV+AAR+AF W R
Sbjct: 9 QLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWAR 68
Query: 80 FSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK 139
+GA R + A I E LA LE LD GK A D+ A YYA A+
Sbjct: 69 TTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAA-WDMDDVAGCFEYYADLAEA 127
Query: 140 IHGEV-----LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194
+ + L M +GY L+EP+GVVG I PWN+P M KV+PALAAGCT ++KP
Sbjct: 128 LDAKQKAPVSLPME-TFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKP 186
Query: 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254
+E + L A + + G+P GVLNVV G G AGA +ASH +DK++FTGST GR++
Sbjct: 187 SELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKI 246
Query: 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
M AAA +KPVSLELGGKSP+++FDDVD++ A + A+ G + G+IC A+SR+ V E
Sbjct: 247 MTAAA-QMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHER 305
Query: 315 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK- 373
I EF +KLV+ AK + DP + R GP V + Q++++L +I K EGAT+L GGK
Sbjct: 306 IASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKR 365
Query: 374 -PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
KKG++IEPTI T+VT M I + E+FGPV+ + F
Sbjct: 366 PEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFS 405
|
Length = 503 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 400 bits (1030), Expect = e-137
Identities = 173/391 (44%), Positives = 243/391 (62%), Gaps = 7/391 (1%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
FI+GE+V+ +G T E I+P GE IA + EDV+ A+ AAR+A G W S E
Sbjct: 1 FIDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQ--GEWAAMSPME 58
Query: 85 RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
R I+ + ADLI E E LA LE LD GK + D+ A+ ++AG A ++GE+
Sbjct: 59 RGRILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEI 118
Query: 145 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 204
+ + YT+REP+GV I WN+P + K++PALAAG M+ KP+E TPL AL
Sbjct: 119 IPLGGPSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALK 178
Query: 205 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 264
A + + AG+P GV NVV G G G + +H D+ KVSFTG G+++M AAA +LK
Sbjct: 179 VAEIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAA-GHLK 237
Query: 265 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 324
V++ELGGKSPL++FDD D+ +A D A+LG F+ G++C +RV+V + I + F +LV
Sbjct: 238 HVTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLV 297
Query: 325 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGKKGY 380
E+ + +GDPFD A GP + D++LSYIE GK EGATL TGG + G+
Sbjct: 298 ERTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGF 357
Query: 381 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
++EPT+F + T+DM I + EIFGPVM ++ F
Sbjct: 358 FVEPTVFADCTDDMTIVREEIFGPVMTVLTF 388
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 395 bits (1017), Expect = e-135
Identities = 163/377 (43%), Positives = 230/377 (61%), Gaps = 10/377 (2%)
Query: 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
I+P TGE +A + EDVDLAVK+A+ A W SG ER I+ K ADL+ E
Sbjct: 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKE--WSATSGMERGRILRKAADLLRERN 58
Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPI 160
+ +A LE +D GK A++ DI +A+ L YYAG A + GE + + YT REP+
Sbjct: 59 DEIARLETIDNGKPIEEARV-DIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPL 117
Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 220
GV I WN+P + K +PALA G M+ KP+ TPL AL A + AG+PDGV N
Sbjct: 118 GVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFN 177
Query: 221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280
VV G G T G + H D+ KVSFTGS G++VM AAA +K V+LELGGKSPL+IFD
Sbjct: 178 VVQGGGET-GQLLCEHPDVAKVSFTGSVPTGKKVMSAAA-KGIKHVTLELGGKSPLIIFD 235
Query: 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340
D D+ A + A++ ++G++C +RV+VQ I DEF ++LVE+ K +GDP D
Sbjct: 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDT 295
Query: 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-----KKGYYIEPTIFTNVTEDML 395
+ G + ++ +++L YIE K+EGA +L GG+ + + G+Y+ P + T+ T+DM
Sbjct: 296 QMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMT 355
Query: 396 IAKNEIFGPVMALMKFK 412
I + EIFGPVM+++ F
Sbjct: 356 IVREEIFGPVMSILPFD 372
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 395 bits (1016), Expect = e-135
Identities = 178/392 (45%), Positives = 250/392 (63%), Gaps = 3/392 (0%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
+LFINGE+ + +TFET+DP T +A+IA G D+D AV AAR F+ G W S
Sbjct: 20 NRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSS 79
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
A+R+ ++ K ADL+E HAE LA+LE LD GK + DIPGAA +R+YA A DK++
Sbjct: 80 PAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVY 139
Query: 142 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
GEV S +REP+GV+ I+PWNFP + K+ PALAAG ++I+KP+E++PL
Sbjct: 140 GEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLS 199
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
A+ A LAK AG+PDGVLNVV GFG AG A++ H DID ++FTGST G+Q+++ A S
Sbjct: 200 AIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDS 259
Query: 262 NLKPVSLELGGKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
N+K V LE GGKS ++F D D+ AA GI +N+G++C+A +R+ ++E I DEF
Sbjct: 260 NMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFL 319
Query: 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY 380
L ++A+ W G P DPA G +D D + S+I G+ +G LL G+ G
Sbjct: 320 ALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNAGLAA- 377
Query: 381 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
I PTIF +V + +++ EIFGPV+ + +F
Sbjct: 378 AIGPTIFVDVDPNASLSREEIFGPVLVVTRFT 409
|
Length = 494 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 393 bits (1012), Expect = e-134
Identities = 176/390 (45%), Positives = 244/390 (62%), Gaps = 6/390 (1%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
+INGEFV S SG+T + ++P TGE +A + ED D AV AA A W R E
Sbjct: 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKA--WERLPAIE 58
Query: 85 RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
R + K ADLI E+A+ LA L + GK S A++ ++ A+ + Y A A +I GE+
Sbjct: 59 RAAYLRKLADLIRENADELAKLIVEEQGKTLSLARV-EVEFTADYIDYMAEWARRIEGEI 117
Query: 145 LKMSRALQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
+ R + + + PIGVV I+PWNFP + K++PAL G T+++KP+E+TPL AL
Sbjct: 118 IPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNAL 177
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
FA L AG+P GVLN+V G G G A+ +H + +S TGST+ G+++M+AAA N+
Sbjct: 178 EFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAA-ENI 236
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
VSLELGGK+P ++ D D++ A + + N G++C + RVYV E IYDEF +KL
Sbjct: 237 TKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKL 296
Query: 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIGKKGYYI 382
VEK KA VGDPFD A GP V++ D++ +E GATLLTGGK P G+KGY+
Sbjct: 297 VEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFY 356
Query: 383 EPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
EPT+ TNV +DM I + EIFGPV+ ++KF
Sbjct: 357 EPTVLTNVRQDMEIVQEEIFGPVLPVVKFS 386
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 385 bits (990), Expect = e-131
Identities = 168/390 (43%), Positives = 231/390 (59%), Gaps = 10/390 (2%)
Query: 25 FINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
+I+GE+V G+ E +P T + + + A ED D A+ AA AF W R S
Sbjct: 4 YIDGEWVAGGDGE--ENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPA--WRRTSPE 59
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
R I+ K D +E E LA L + GK A G++ A RYYAG A ++ GE
Sbjct: 60 ARADILDKAGDELEARKEELARLLTREEGKTLPEA-RGEVTRAGQIFRYYAGEALRLSGE 118
Query: 144 VLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
L +R ++ T REP+GVVG I PWNFP + K++PALA G T++ KPAE TP A
Sbjct: 119 TLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASA 178
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
+ + AG+P GV N+V G G G A+ H D+D VSFTGST VGR++ AAA +
Sbjct: 179 WALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRI-AAAAAAR 237
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
V LE+GGK+PL++ DD D++ A + A+ G F+ G+ C ASSR+ V EGI+D F +
Sbjct: 238 GARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEA 297
Query: 323 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI--GKKGY 380
LVE+ KA VGD D V GP V ++Q ++ L YIE + EGA L+ GG+ + +GY
Sbjct: 298 LVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGY 357
Query: 381 YIEPTIFTNVTEDMLIAKNEIFGPVMALMK 410
Y+ P +F VT DM IA+ EIFGPV A+++
Sbjct: 358 YLAPALFAGVTNDMRIAREEIFGPVAAVIR 387
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 382 bits (982), Expect = e-130
Identities = 163/374 (43%), Positives = 217/374 (58%), Gaps = 10/374 (2%)
Query: 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
+DP TGE IA + + DVD AV AA AF W R + AER +LK AD IEE+AE
Sbjct: 2 VDPATGEEIATVPDASAADVDAAVAAAHAAFPS--WRRTTPAERSKALLKLADAIEENAE 59
Query: 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYT---LRE 158
LA LE+ + GK + ++PGA + R++AGAA + G L G+T RE
Sbjct: 60 ELAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPA--AGEYLPGHTSMIRRE 117
Query: 159 PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV 218
PIGVV I PWN+P M K++PALAAG T+++KP+E TPL L A LA +P GV
Sbjct: 118 PIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAA-EVLPPGV 176
Query: 219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278
+NVV G G +AG A+ +H + VS TGS G++V +AAA LK V LELGGK+P+++
Sbjct: 177 VNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAA-DTLKRVHLELGGKAPVIV 235
Query: 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338
FDD D++ A +N G+ C A+ RVYV E +YDEF LVE A VGDP D
Sbjct: 236 FDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDE 295
Query: 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAK 398
GP Q +R+ ++E A +LTGG+ GY+ EPT+ V +D I +
Sbjct: 296 DTEMGPLNSAAQRERVAGFVE-RAPAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQ 354
Query: 399 NEIFGPVMALMKFK 412
EIFGPV+ + F
Sbjct: 355 EEIFGPVVTVQPFD 368
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 380 bits (977), Expect = e-129
Identities = 175/398 (43%), Positives = 241/398 (60%), Gaps = 13/398 (3%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
FI+GEFV S SG+TFET+ P T E + +A G DVD A KAA++AF W
Sbjct: 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKR--WAELKA 59
Query: 83 AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG-AADKIH 141
AER+ + K ADLIE+HA+ +AVLE LD G+ + + AA R++A + +
Sbjct: 60 AERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQQ-VIRAAENFRFFADKCEEAMD 118
Query: 142 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
G + L YT+R P+G VG I PWN P + K++PALA G T+++KPAE +PL
Sbjct: 119 GRTYPVDTHLN-YTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLT 177
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
A A +AK AG+PDGV N+V GFG AG A+ +H D+ VSFTG T G +M+ A +
Sbjct: 178 AARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADT 237
Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
LK S+ELGGKSP+++FDD D+ A D + I GE C ASSR+ VQE I ++F +
Sbjct: 238 -LKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVE 296
Query: 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGK 377
KLVE+ +A VG P DP GP + + ++L Y+E ++EGAT+L GG+ G+
Sbjct: 297 KLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGE 356
Query: 378 K---GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
G Y+ PT+FT M IA+ EIFGPV+ ++ FK
Sbjct: 357 DLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFK 394
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 373 bits (960), Expect = e-126
Identities = 153/378 (40%), Positives = 207/378 (54%), Gaps = 9/378 (2%)
Query: 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
I+P T E I + DVD A+ AAR+AFD G W ER + + + +E E
Sbjct: 2 INPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWST-DAEERARCLRQLHEALEARKE 60
Query: 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV---LKMSRALQGYTL-- 156
L L + G A+ + G LRY+A AD E + R G +
Sbjct: 61 ELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVR 120
Query: 157 REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 216
REP+GVV I PWNFP + K++PALAAG T+++KPA TPL AL + +P
Sbjct: 121 REPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLPA 180
Query: 217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL 276
GV+NVV G G A+ + +D VSFTGST VGR++M AA + LK V LELGGKS
Sbjct: 181 GVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAA-ATLKRVLLELGGKSAN 239
Query: 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336
++ DD D+ AA A+ + N G+ C ++R+ V YDE + L +A VGDP
Sbjct: 240 IVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPA 299
Query: 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIG-KKGYYIEPTIFTNVTEDM 394
DP GP + Q DR+ YI G+ EGA L+TGG P G KG+Y+EPT+F +V DM
Sbjct: 300 DPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDM 359
Query: 395 LIAKNEIFGPVMALMKFK 412
IA+ EIFGPV+ ++ +
Sbjct: 360 RIAQEEIFGPVLVVIPYD 377
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 360 bits (926), Expect = e-121
Identities = 169/389 (43%), Positives = 240/389 (61%), Gaps = 14/389 (3%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
FING++V + K+F TI+P TGE +A + + ++EDVD AV AAR AF+ W G
Sbjct: 24 HFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFES--WSALPGH 81
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
R + + A I++H + AVLE+LD GK ++ DIP A ++AG A
Sbjct: 82 VRARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQL---- 137
Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
+ L G+ +P+GVVG I+PWNFP M K+ PALA G T+++KPAE TPL AL
Sbjct: 138 ---LDTELAGW---KPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTAL 191
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
FA + AG+P GVLN+V G + G+A+A+H +DKV+FTGST+VGR + +A A +
Sbjct: 192 LFAEICAEAGLPPGVLNIVTG-NGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGTG- 249
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
K +SLELGGKSP ++FDD D+++A + + I FN+G++C A SR+ VQE + +E +KL
Sbjct: 250 KKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKL 309
Query: 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE 383
E+ VGDP D A+ G VD Q RI +E G+ EGA + G + KG +
Sbjct: 310 KERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYP 369
Query: 384 PTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
PT+FTNV IA+ EIFGPV+ ++ F+
Sbjct: 370 PTLFTNVPPASRIAQEEIFGPVLVVLTFR 398
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 358 bits (921), Expect = e-121
Identities = 169/378 (44%), Positives = 240/378 (63%), Gaps = 12/378 (3%)
Query: 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
I+P TG+ +AR+ DVD AV AAR AF W + ER ++ + A + EHA
Sbjct: 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPE--WRATTPLERARMLRELATRLREHA 58
Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPI 160
E LA+++ALD G S A +GD+ AA L Y+AG ++ GE + + YTLREP
Sbjct: 59 EELALIDALDCGNPVS-AMLGDVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPY 117
Query: 161 GVVGHIIPWNFPTTMFFM-KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVL 219
GVV I+ +N P MF K++ LAAG T++VKP EQ PL AL A LA+ +P GV
Sbjct: 118 GVVARIVAFNHP-LMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAR-EVLPPGVF 175
Query: 220 NVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF 279
N++PG G TAGAA+ H D+ +++ GS GR +M+AAA +K V+LELGGK+ L++F
Sbjct: 176 NILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEG-IKHVTLELGGKNALIVF 234
Query: 280 DDVDVNTAADMALLGILFN-KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338
D D AAD A+ G+ F G+ C ++SR++V E IYDE ++VE+ A VGDP DP
Sbjct: 235 PDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDP 294
Query: 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGKKGYYIEPTIFTNVTEDM 394
A GP V ++Q+DR++ YI+ KREGA L+TGG P + G+Y+EPT+F +VT M
Sbjct: 295 ATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGM 354
Query: 395 LIAKNEIFGPVMALMKFK 412
IA+ EIFGPV+++++++
Sbjct: 355 RIAREEIFGPVLSVLRWR 372
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 357 bits (917), Expect = e-120
Identities = 167/399 (41%), Positives = 239/399 (59%), Gaps = 20/399 (5%)
Query: 25 FINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
+I GE+VDS SG+TF++ +P E + DVD AV+AAR+AF W +
Sbjct: 2 YIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPE--WRKVPAP 59
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
R + + A+L+++ E LA L + GK + + GD+ A + +Y AG ++ GE
Sbjct: 60 RRAEYLFRAAELLKKRKEELARLVTREMGKPLAEGR-GDVQEAIDMAQYAAGEGRRLFGE 118
Query: 144 VL------KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
+ K + T R+PIGVV I PWNFP + K+ PAL G T++ KPAE
Sbjct: 119 TVPSELPNKDA-----MTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAED 173
Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
TP AL L AG+P GV+NVV G G G A+ H D+D VSFTGST+VG ++ +
Sbjct: 174 TPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGET 233
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
A N K V+LE+GGK+P+++ DD D++ A + AL G+ C A+SR+ V E +YD
Sbjct: 234 CARPN-KRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYD 292
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI-- 375
EF K+ VE+AK VGD D GP +++ Q +++L+Y E GK EGATLL GG+ +
Sbjct: 293 EFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTG 352
Query: 376 --GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+KGY++EPT+FT+VT DM IA+ EIFGPV+AL++
Sbjct: 353 GGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVS 391
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 353 bits (908), Expect = e-119
Identities = 156/378 (41%), Positives = 223/378 (58%), Gaps = 10/378 (2%)
Query: 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
I+P TG+ I + DVD AV AA+ AF W ER ++ + AD +E +
Sbjct: 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAF--PEWAATPARERGKLLARIADALEARS 58
Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPI 160
E LA L AL+ G + A+ RY+ G A ++ GE L + YT+REP+
Sbjct: 59 EELARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVREPL 118
Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 220
GVVG I+PWN P + +K++PAL AG T+++K AE PL L A + +P GVLN
Sbjct: 119 GVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILA-QVLPAGVLN 177
Query: 221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280
V+ G+G GAA+ H D+DKV+FTGST+VG+ + +AAA L PVSLELGGKSP+++F
Sbjct: 178 VITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAA-DRLIPVSLELGGKSPMIVFP 236
Query: 281 DVDVNTAADMALLGILFNK-GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339
D D++ A D A+ G+ F + G+ C A SR++V E IYD F +KLV K +GDP D A
Sbjct: 237 DADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEA 296
Query: 340 VRQGPQVDKKQFDRILSYIEHGKRE-GATLLTGGKP----IGKKGYYIEPTIFTNVTEDM 394
G + +KQF ++ YI+ G GAT+L GG G++++PTIF+ V +
Sbjct: 297 TDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEW 356
Query: 395 LIAKNEIFGPVMALMKFK 412
+A+ EIFGPV+ + +K
Sbjct: 357 RLAREEIFGPVLCAIPWK 374
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 351 bits (902), Expect = e-118
Identities = 156/371 (42%), Positives = 210/371 (56%), Gaps = 8/371 (2%)
Query: 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
I+P TGE A + +D AV AA+ AF W ERR +L AD IE +AE
Sbjct: 2 INPATGEVFASAPVASEAQLDQAVAAAKAAFPG--WSATPLEERRAALLAIADAIEANAE 59
Query: 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIG 161
LA L L+ GK + A ++ GA LRY A EV++ + R+P+G
Sbjct: 60 ELARLLTLEQGKPLAEA-QFEVGGAVAWLRYTASLDLPD--EVIEDDDTRRVELRRKPLG 116
Query: 162 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNV 221
VV I+PWNFP + K++PAL AG T+++KP+ TPL L LA+ +P GVLNV
Sbjct: 117 VVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLNV 175
Query: 222 VPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDD 281
V G G G A+ SH DI K+SFTGST G++VM +AA LK V+LELGG ++ D
Sbjct: 176 VSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAA-KTLKRVTLELGGNDAAIVLPD 233
Query: 282 VDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR 341
VD++ A G N G++C A R+YV E IYDEF + LV AKA VVGD DP
Sbjct: 234 VDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTT 293
Query: 342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEI 401
GP +K Q+D++ +E K +GA +L GG+P+ GY+I PTI + E I E
Sbjct: 294 LGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQ 353
Query: 402 FGPVMALMKFK 412
FGPV+ ++K+
Sbjct: 354 FGPVLPVLKYS 364
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 350 bits (901), Expect = e-117
Identities = 174/399 (43%), Positives = 227/399 (56%), Gaps = 18/399 (4%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
FI GE+V V G+ F+ I P TG+ + ED++LA+ AA A + W + S AE
Sbjct: 4 FIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEA--WGKTSVAE 61
Query: 85 RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
R I+ K AD +E + E+LAV E D GK DIP A + RY+AG G +
Sbjct: 62 RANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSI 121
Query: 145 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 204
++ Y EP+GVVG IIPWNFP M K++PALAAG +++KPAEQTP L
Sbjct: 122 SEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILV 181
Query: 205 FAHLAKLAG--VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
L +L G +P GV+NVV GFG AG +AS I KV+FTG T GR +MQ A + N
Sbjct: 182 ---LMELIGDLLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYA-SEN 237
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAA--DMALLGIL---FNKGEICVASSRVYVQEGIYD 317
+ PV+LELGGKSP + F DV A D AL G + N+GE+C SR +QE IYD
Sbjct: 238 IIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFALNQGEVCTCPSRALIQESIYD 297
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK---- 373
F ++ +E+ KA G+P D G Q +Q ++ILSYI+ GK EGA +LTGG+
Sbjct: 298 RFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNEL 357
Query: 374 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
G Y PT F M I + EIFGPV+A+ FK
Sbjct: 358 GGLLGGGYYVPTTFKG-GNKMRIFQEEIFGPVLAVTTFK 395
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 348 bits (894), Expect = e-116
Identities = 162/393 (41%), Positives = 241/393 (61%), Gaps = 7/393 (1%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
T+ I G++ D+ GKTF +P TGE IA + + + + A+ +A AF W + +
Sbjct: 25 TQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP--SWSKLT 82
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKI 140
+ER I+ ++ DLI + E LA L L+ GK + +G++ A+ L Y+A A ++
Sbjct: 83 ASERSKILRRWYDLIIANKEDLAQLMTLEQGK--PLKEAIGEVAYGASFLEYFAEEAKRV 140
Query: 141 HGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
+G+++ + L++P+GVVG I PWNFP M KV PALAAGCT++VKP+E TP
Sbjct: 141 YGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTP 200
Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
L AL A LA AG+P GVLNVV G P G A+ + + K++FTGST VG+++M A A
Sbjct: 201 LTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLM-AGA 259
Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
+ +K VSLELGG +P ++FDD D++ A AL N G+ CV ++R+ VQEGIYD+F
Sbjct: 260 AATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKF 319
Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG 379
+ + + VVGD F+ V QGP +++ ++ S+++ +GA +L GGK G
Sbjct: 320 AEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGG 379
Query: 380 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+ EPT+ +VTEDMLI + E+FGPV L +FK
Sbjct: 380 TFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFK 412
|
Length = 498 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 345 bits (886), Expect = e-115
Identities = 156/394 (39%), Positives = 230/394 (58%), Gaps = 9/394 (2%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
FI+G V S K + +P T + IA +A + DVD AV +A +AF W + + A
Sbjct: 2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAF-VSAWAKTTPA 60
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
ER I+L+ ADLIE+H E LA LE L +GK ++ ++ +AN LRY+AG A KI+GE
Sbjct: 61 ERGRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGE 120
Query: 144 VLKMSRAL------QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
L S +T REP+GVV I+PWNF + K+ ALA GCT+++KP+E
Sbjct: 121 TLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEF 180
Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
TPL L A LAK AG+PDGVLNVV G G GA + SH D+ KVSFTGS G+++
Sbjct: 181 TPLTLLRVAELAKEAGIPDGVLNVVNGKGAV-GAQLISHPDVAKVSFTGSVATGKKI-GR 238
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
A S+L V+LELGGK+ D D++ + L ++G++C A R YV +D
Sbjct: 239 QAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFD 298
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 377
E KL + ++ VG P D +V GP ++ FD++ SY++ + EG ++ GG+ +
Sbjct: 299 ELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAG 358
Query: 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
+GY+++PT+ + D + + E FGPV++ + +
Sbjct: 359 EGYFVQPTLVLARSADSRLMREETFGPVVSFVPY 392
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 341 bits (876), Expect = e-114
Identities = 144/360 (40%), Positives = 204/360 (56%), Gaps = 19/360 (5%)
Query: 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK 119
DVD A AA A W ER I+ K A+++EE + +A ++G A
Sbjct: 1 DVDRAYAAAAAAQ--KAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKA- 57
Query: 120 MGDIPGAANTLRYYAGAADKIHGEVL------KMSRALQGYTLREPIGVVGHIIPWNFPT 173
++ A LR AG + GE+L K S R P+GVVG I P+NFP
Sbjct: 58 AFEVGAAIAILREAAGLPRRPEGEILPSDVPGKESMVR-----RVPLGVVGVISPFNFPL 112
Query: 174 TMFFMKVSPALAAGCTMIVKPAEQTPL-IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAA 232
+ V+PALA G +++KP +TP+ L A + + AG+P GVLNVVPG G G A
Sbjct: 113 ILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDA 172
Query: 233 IASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMAL 292
+ H + +SFTGST VGR + + A +LK V+LELGG +PL++ DD D++ A A
Sbjct: 173 LVEHPRVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAA 231
Query: 293 LGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFD 352
G ++G+IC+A+ R+ V E +YDEF +KLV KAKA VGDP DP GP ++++Q D
Sbjct: 232 FGAFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVD 291
Query: 353 RILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
R+ + +E GA LLTGG +G + +PT+ ++VT DM I + EIFGPV ++ F
Sbjct: 292 RVHAIVEDAVAAGARLLTGGTY---EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFD 348
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 333 bits (855), Expect = e-111
Identities = 150/372 (40%), Positives = 230/372 (61%), Gaps = 6/372 (1%)
Query: 43 DPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102
+P TGE I + + ++ + A++AA +AF W + ER ++ K+ +L+ E+ +
Sbjct: 3 NPATGEIIGSVPDQGVDETEAAIRAAYEAFK--TWRATTAKERSSLLRKWYNLMMENKDD 60
Query: 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQ-GYTLREPIG 161
LA L L+ GK AK G+I AA+ L ++A A +++G+ + ++ + +++P+G
Sbjct: 61 LARLITLENGKPLKEAK-GEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLIVIKQPVG 119
Query: 162 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNV 221
V I PWNFP M K ALAAGCT++VKPAEQTPL AL A LA+ AG+P GVLNV
Sbjct: 120 VCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNV 179
Query: 222 VPG-FGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280
+ G G + + + K+SFTGST+VG+ +M+ +A S +K VS+ELGG +P ++FD
Sbjct: 180 ITGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSA-STVKKVSMELGGNAPFIVFD 238
Query: 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340
D D++ A + A+ N G+ CV ++R+YV +GIYDEF KKL E K VG+ D V
Sbjct: 239 DADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGV 298
Query: 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNE 400
QGP +++K +++ +I +GA ++TGGK G + EPT+ +NVT DML++K E
Sbjct: 299 TQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVSKEE 358
Query: 401 IFGPVMALMKFK 412
FGP+ + KF
Sbjct: 359 TFGPLAPVFKFD 370
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 332 bits (854), Expect = e-111
Identities = 147/380 (38%), Positives = 208/380 (54%), Gaps = 16/380 (4%)
Query: 39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLIE 97
E I P GE I R+ +EDV+ A+ AA++ P + ER I+ + A L+E
Sbjct: 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAY---ERAEILERAAQLLE 57
Query: 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQ 152
E E A AL+AGK A+ ++ A TLR A A ++ GE +
Sbjct: 58 ERREEFARTIALEAGKPIKDAR-KEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRI 116
Query: 153 GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA 212
G+T+REPIGVV I P+NFP + KV PA+AAG +++KPA QTPL AL A L A
Sbjct: 117 GFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEA 176
Query: 213 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272
G+P G LNVV G G T G A+ + + +SFTGS VG + + A LK V+LELG
Sbjct: 177 GLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG---LKKVTLELGS 233
Query: 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332
+ +++ D D+ A + + G N G++C++ R++V E IYDEF ++ V K VV
Sbjct: 234 NAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVV 293
Query: 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTE 392
GDP D GP + + + +RI ++E GA LLTGGK G +EPT+ T+V
Sbjct: 294 GDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGA---ILEPTVLTDVPP 350
Query: 393 DMLIAKNEIFGPVMALMKFK 412
DM + E+F PV++L F
Sbjct: 351 DMKVVCEEVFAPVVSLNPFD 370
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 329 bits (846), Expect = e-109
Identities = 144/375 (38%), Positives = 217/375 (57%), Gaps = 8/375 (2%)
Query: 39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98
F+ ++P G AR+A G ++D + A+ AA AF W + +ER I+LK A+++E
Sbjct: 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAF--PAWAATTPSERERILLKAAEIMER 58
Query: 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA-LQGYTLR 157
A+ L L + G + A + LR AG ++ GE L ++R
Sbjct: 59 RADDLIDLLIDEGGSTYGKA-WFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVR 117
Query: 158 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 217
P+GVV I P+N+P + KV+ ALAAG T+++KP+E+TP+I L A + + AG+P G
Sbjct: 118 RPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKG 177
Query: 218 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277
V NVV G G G + + V+FTGST VGR++ + A +LK ++LELGGK+PL+
Sbjct: 178 VFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAG-RHLKKITLELGGKNPLI 236
Query: 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337
+ D D++ A A G ++G+IC+++SR+ V+E +YDEF KK V +A VGDP D
Sbjct: 237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRD 296
Query: 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIA 397
P GP + +Q +RI +E +GA LLTGGK G + +PT+ T+VT DM I
Sbjct: 297 PDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGK---YDGNFYQPTVLTDVTPDMRIF 353
Query: 398 KNEIFGPVMALMKFK 412
+ E FGPV +++ K
Sbjct: 354 REETFGPVTSVIPAK 368
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 326 bits (839), Expect = e-108
Identities = 138/395 (34%), Positives = 211/395 (53%), Gaps = 13/395 (3%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
I GE+V S G+TF + +P GE IAR+ EDV+ AV AAR+AF W +
Sbjct: 2 VIGGEWVGS-GGETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKE--WRKVPAPR 58
Query: 85 RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
R I+ + + + + E L L +L+ GK+ G++ + Y G + ++G
Sbjct: 59 RGEIVRQIGEALRKKKEALGRLVSLEMGKILPEGL-GEVQEMIDICDYAVGLSRMLYGLT 117
Query: 145 LKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
+ R + P+GVVG I +NFP + + AL G T++ KP+E TPL A+
Sbjct: 118 IPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAI 177
Query: 204 ----YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
A + + G+P GV+N+V G G G + + VSFTGST+VGR+V + A
Sbjct: 178 AVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETVA 236
Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
V LELGG + +++ DD D++ A L + G+ C + R+ V E +YDEF
Sbjct: 237 RRF-GRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEF 295
Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI--GK 377
++LV+ K +GDP D GP +++ ++ L+ IE K +G T+LTGGK I G+
Sbjct: 296 LERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGE 355
Query: 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
G Y+EPTI T VT+D I + E F P++ ++KF
Sbjct: 356 PGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFD 390
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 326 bits (837), Expect = e-108
Identities = 159/398 (39%), Positives = 215/398 (54%), Gaps = 16/398 (4%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
FING FV+S GKTF I+P G IAR+ E +VD AV AAR A GPW + + AE
Sbjct: 4 FINGAFVES--GKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAAL-KGPWGKMTVAE 60
Query: 85 RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
R ++ AD IE + E D GK S A DIP A R +A E
Sbjct: 61 RADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTEC 120
Query: 145 LKM-----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
+M AL Y +R+P+GVVG I PWN P + KV PALA G T++VKP+E+TP
Sbjct: 121 FEMATPDGKGALN-YAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETP 179
Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
A + GVP GV NVV GFGP +AG + H +D ++FTG T G +M+AA
Sbjct: 180 GTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAA 239
Query: 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318
A +KPVS ELGGK+ ++F D D + A L N G++C+ + RVYV+ I+D
Sbjct: 240 ADG-VKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDR 298
Query: 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG-----K 373
F L +A++ +G P DPA GP + + D++LSY EGAT++TGG
Sbjct: 299 FVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFG 358
Query: 374 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
G +++PTI+T + + + EIFGP + F
Sbjct: 359 DALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPF 396
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 321 bits (824), Expect = e-107
Identities = 135/260 (51%), Positives = 173/260 (66%), Gaps = 5/260 (1%)
Query: 66 KAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPG 125
AAR AF W AER I+ K ADL+EE E LA LE L+ GK A G++
Sbjct: 1 AAARAAFKA--WAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEAL-GEVAR 57
Query: 126 AANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPAL 184
A +T RY AG ADK+ G L + Y REP+GVVG I PWNFP + K++PAL
Sbjct: 58 AIDTFRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPAL 117
Query: 185 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 244
AAG T+++KP+E TPL AL A L + AG+P GV+NVVPG G GAA+ SH +DK+SF
Sbjct: 118 AAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISF 177
Query: 245 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICV 304
TGST VG+ +M+AAA NLKPV+LELGGKSP+++ +D D++ A + A+ G FN G+IC
Sbjct: 178 TGSTAVGKAIMKAAA-ENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICT 236
Query: 305 ASSRVYVQEGIYDEFEKKLV 324
A+SR+ V E IYDEF +KLV
Sbjct: 237 AASRLLVHESIYDEFVEKLV 256
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 321 bits (825), Expect = e-106
Identities = 150/375 (40%), Positives = 205/375 (54%), Gaps = 7/375 (1%)
Query: 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
+IDP TGE I A+G + + A+ AAR+AFD W R ++L+ AD E +A
Sbjct: 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDW-AHDPRLRARVLLELADAFEANA 59
Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPI 160
E LA L AL+ GK+ A +I GA + LRYYAG A G +++ LREP+
Sbjct: 60 ERLARLLALENGKILGEA-RFEISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLREPM 118
Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI-ALYFAHLAKLAGVPDGVL 219
GV G I+PWN P + ++PALAAGCT++VKPA QT I A LA++ +P GV+
Sbjct: 119 GVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVV 178
Query: 220 NVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF 279
N+ G A + + D+D +SFTGST GR +M AAA LK + LELGGK+P ++F
Sbjct: 179 NLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAA-PTLKRLGLELGGKTPCIVF 237
Query: 280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339
DD D++ A + G+ C+A SRV VQ I DE +L + A VG DPA
Sbjct: 238 DDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPA 297
Query: 340 VRQGPQVDKKQFDRILSYIEHGKREGAT-LLTGGKPIGK--KGYYIEPTIFTNVTEDMLI 396
GP +D+ DR+ +E GA +L GG KG ++ PT+ D I
Sbjct: 298 SDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADI 357
Query: 397 AKNEIFGPVMALMKF 411
+ EIFGPV+ L F
Sbjct: 358 VQEEIFGPVLTLETF 372
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 322 bits (828), Expect = e-106
Identities = 153/402 (38%), Positives = 225/402 (55%), Gaps = 24/402 (5%)
Query: 24 LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
L I G+ V + + E+ +P E + + + KE+ + AV+AAR AF W R
Sbjct: 35 LVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPT--WRRTPP 90
Query: 83 AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKIH 141
ER ++L+ A L+ LA L+ GK +WA+ D+ A + L YYA ++
Sbjct: 91 EERARLLLRAAALLRRRRFELAAWMVLEVGK--NWAEADADVAEAIDFLEYYAREMLRLR 148
Query: 142 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
G ++M + P+GV I PWNFP + + AL G T+++KPAE TP+I
Sbjct: 149 GFPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVI 208
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT- 260
A + + AG+P GV+N +PG G G + H D+ ++FTGS +VG ++ + AA
Sbjct: 209 AAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKV 268
Query: 261 ----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL---FN-KGEICVASSRVYVQ 312
LK V E+GGK+ +++ +D D+ D A GI+ F +G+ C A SRV V
Sbjct: 269 QPGQKWLKRVIAEMGGKNAIIVDEDADL----DEAAEGIVRSAFGFQGQKCSACSRVIVH 324
Query: 313 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 372
E +YDEF ++LVE+ KA VGDP DP V GP +DK DRI YIE GK EG LL GG
Sbjct: 325 ESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEG-RLLLGG 383
Query: 373 KPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+ + +GY+++PTIF +V D +A+ EIFGPV+A++K K
Sbjct: 384 EVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAK 425
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 311 bits (799), Expect = e-102
Identities = 154/392 (39%), Positives = 218/392 (55%), Gaps = 19/392 (4%)
Query: 28 GEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRG 87
GE+ D S +T + ++P TGE +A I KEDVD A +AA A W ER
Sbjct: 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAA--QKEWAATLPQERAE 58
Query: 88 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-- 145
I+ K A ++EE + + ++G A + A R A ++ G +L
Sbjct: 59 ILEKAAQILEERRDEIVEWLIRESGSTRIKA-NIEWGAAMAITREAATFPLRMEGRILPS 117
Query: 146 ----KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
K +R REP+GVVG I PWNFP + V+PALA G +++KPA TP+
Sbjct: 118 DVPGKENR-----VYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPIT 172
Query: 202 A-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
L A + + AG+P GVLNVV G G G A H +SFTGST VGR + + A
Sbjct: 173 GGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR 232
Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
+LK V+LELGG +P ++ +D D++ A + A+ G ++G+IC+A +R+ V E +YDEF
Sbjct: 233 -HLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFV 291
Query: 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY 380
+K VE+ KA GDP DP GP +++ Q D +L IE EGATLL GG+ +G
Sbjct: 292 EKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEA---EGN 348
Query: 381 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+EPT+ ++VT DM IA+ EIFGPV ++K
Sbjct: 349 VLEPTVLSDVTNDMEIAREEIFGPVAPIIKAD 380
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 306 bits (787), Expect = e-100
Identities = 152/395 (38%), Positives = 216/395 (54%), Gaps = 12/395 (3%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
KLFINGE+V+S + + + +P TGE IAR+ E+VD AV AA+ AF W
Sbjct: 1 LKLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFP--AWSATP 58
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
+R+ +M KF L+EE+ + LA L L+ GK + A+ GD+ + + +
Sbjct: 59 VLKRQQVMFKFRQLLEENLDELARLITLEHGKTLADAR-GDVLRGLEVVEFACSIPHLLK 117
Query: 142 GEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
GE L+ ++R + Y+ R+P+GVV I P+NFP + A+A G T ++KP+E+ P
Sbjct: 118 GEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPG 177
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
A+ A L + AG+PDGVLNVV G G A A+ H DI VSF GST VG + A
Sbjct: 178 AAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYI-YERAA 235
Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF-NKGEICVASSRVYVQEGIYDEF 319
+N K V G K+ ++ D D+ A+ AL+G F G+ C+A S DE+
Sbjct: 236 ANGKRVQALGGAKNHAVVMPDADLEQTAN-ALVGAAFGAAGQRCMALSVAVAVGDEADEW 294
Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PI 375
KLVE+AK VG DP GP + +RI IE G EGA L+ G+ P
Sbjct: 295 IPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPG 354
Query: 376 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMK 410
+ G ++ PTI NVT DM I K EIFGPV+++++
Sbjct: 355 YENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVR 389
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 302 bits (775), Expect = 6e-99
Identities = 137/378 (36%), Positives = 193/378 (51%), Gaps = 18/378 (4%)
Query: 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
+P TGE + + D +V AV AR A W R +L++ + +HA+
Sbjct: 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQ--RAWAALGVEGRAQRLLRWKRALADHAD 58
Query: 102 VLAVLEALDAGKLHSWAKMG-DIPGAANTLRYYAGAADKI-------HGEVLKMSRALQG 153
LA L + GK A G ++ A + + A A ++ G ++ +A
Sbjct: 59 ELAELLHAETGK--PRADAGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVE 116
Query: 154 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
Y P GVVG I PWN+P + PALAAG +++KP+E TPL+ A AG
Sbjct: 117 Y---RPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAG 173
Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
P GVL VV G G T A I + +DKV+FTGS GR+VM AAA L PV LELGGK
Sbjct: 174 PPQGVLQVVTGDGATGAALIDA--GVDKVAFTGSVATGRKVMAAAA-ERLIPVVLELGGK 230
Query: 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333
P+++ D D+ AA A+ G + N G+ C++ RVYV E +YDEF +LV KA+A G
Sbjct: 231 DPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPG 290
Query: 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTED 393
GP +Q D + +++ +GA LTGG G + EPT+ T+V D
Sbjct: 291 ADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHD 350
Query: 394 MLIAKNEIFGPVMALMKF 411
M + + E FGPV+ +M
Sbjct: 351 MDVMREETFGPVLPVMPV 368
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 293 bits (753), Expect = 1e-95
Identities = 134/379 (35%), Positives = 209/379 (55%), Gaps = 11/379 (2%)
Query: 39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98
E +P GE I + +E+V A++ A +A D +R I++K A+LIE
Sbjct: 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDV--MSNLPAYKRYKILMKVAELIER 58
Query: 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQG----- 153
E LA L ++ GK ++ ++ + A A + GE + +
Sbjct: 59 RKEELAKLLTIEVGKPIKQSR-VEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIA 117
Query: 154 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
+T+REPIGVVG I P+NFP +F K++PA+A G +++VKP+ TPL A+ A + + AG
Sbjct: 118 FTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAG 177
Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
+P GV+NVV G+G G I ++ ++ +SFTGST VG + A + K V+LELGG
Sbjct: 178 LPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGT-GKKVALELGGS 236
Query: 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333
P+++ D D+ A +A+ G N G++C A R+ V+E +YD+F K LVEK K VG
Sbjct: 237 DPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVG 296
Query: 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTED 393
DP D + GP + + +R+ + + +G +L GGK +G + PT+ N T D
Sbjct: 297 DPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGK--RDEGSFFPPTVLENDTPD 354
Query: 394 MLIAKNEIFGPVMALMKFK 412
M++ K E+FGPV+ + K K
Sbjct: 355 MIVMKEEVFGPVLPIAKVK 373
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 293 bits (753), Expect = 9e-95
Identities = 146/394 (37%), Positives = 210/394 (53%), Gaps = 26/394 (6%)
Query: 31 VDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIML 90
VD +G T E P TGE +A + DV+ A AR A W ER ++L
Sbjct: 26 VDGAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAA--QRAWAATPVRERAAVLL 83
Query: 91 KFADLIEEHAEVLAVLEALDAGK--LHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 148
+F DL+ E+ E L L L+ GK H++ ++ D+ A T RYYA A K+ L
Sbjct: 84 RFHDLVLENREELLDLVQLETGKARRHAFEEVLDV---ALTARYYARRAPKL----LAPR 136
Query: 149 R---ALQGYT----LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
R AL T LR+P GVVG I PWN+P T+ PAL AG +++KP QTPL
Sbjct: 137 RRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLT 196
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
AL L AG+P + VV G GP G A+ + D + FTGST GR + + A
Sbjct: 197 ALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAG-R 253
Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
L SLELGGK+P+++ DD D++ AA A+ N G++C++ R+YV E IYDEF +
Sbjct: 254 RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVR 313
Query: 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP---IGKK 378
V +A +G +D + G + + Q + + ++++ +GAT+L GGK +G
Sbjct: 314 AFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGP- 372
Query: 379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+ EPT+ T VT DM +A+ E FGPV+++
Sbjct: 373 -LFYEPTVLTGVTPDMELAREETFGPVVSVYPVA 405
|
Length = 524 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 291 bits (747), Expect = 1e-94
Identities = 147/389 (37%), Positives = 229/389 (58%), Gaps = 5/389 (1%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
INGE++D+ +G+ + +P G+ + + + ++ A+ AA +A W + E
Sbjct: 14 LINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKE 71
Query: 85 RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
R I+ ++ +L+ EH + LA L L+ GK + AK G+I AA+ + ++A +I+G+
Sbjct: 72 RANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDT 130
Query: 145 LKMSRALQGY-TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
+ +A + +++PIGV I PWNFP M K PALAAGCTM++KPA QTP AL
Sbjct: 131 IPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSAL 190
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
A LA AG+P GV NVV G G + S+ + K+SFTGST++GRQ+M+ A ++
Sbjct: 191 ALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCA-KDI 249
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
K VSLELGG +P ++FDD D++ A + AL N G+ CV ++R+YVQ+G+YD F +KL
Sbjct: 250 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKL 309
Query: 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE 383
+ +GD + V GP +D+K ++ +I +GA ++ GGK G + +
Sbjct: 310 QQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQ 369
Query: 384 PTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
PTI +V + +AK E FGP+ L +FK
Sbjct: 370 PTILVDVPANAKVAKEETFGPLAPLFRFK 398
|
Length = 482 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 283 bits (725), Expect = 2e-91
Identities = 139/381 (36%), Positives = 201/381 (52%), Gaps = 22/381 (5%)
Query: 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
P TGE + + + DV+ A AR A W AER + L+F DL+ E +
Sbjct: 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQR--AWAARPFAERAAVFLRFHDLVLERRD 58
Query: 102 VLAVLEALDAGK--LHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR---ALQGYT- 155
L L L+ GK H++ ++ D A RYYA A++ +LK R A+ T
Sbjct: 59 ELLDLIQLETGKARRHAFEEVLD---VAIVARYYARRAER----LLKPRRRRGAIPVLTR 111
Query: 156 ---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA 212
R P GVVG I PWN+P T+ PAL AG +++KP QT L AL+ L A
Sbjct: 112 TTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEA 171
Query: 213 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272
G+P + VV G G G AI + D V FTGST GR V + A L SLELGG
Sbjct: 172 GLPRDLWQVVTGPGSEVGGAIVDNADY--VMFTGSTATGRVVAERAG-RRLIGCSLELGG 228
Query: 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332
K+P+++ +D D++ AA A+ N G++CV+ R+YV E +YDEF ++ V + +A +
Sbjct: 229 KNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRL 288
Query: 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG-YYIEPTIFTNVT 391
G D G + + Q DR+ ++++ +GAT+L GG+ G Y+ EPT+ T VT
Sbjct: 289 GAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVT 348
Query: 392 EDMLIAKNEIFGPVMALMKFK 412
EDM + E FGPV+++ +
Sbjct: 349 EDMELFAEETFGPVVSIYRVA 369
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 280 bits (717), Expect = 3e-90
Identities = 149/393 (37%), Positives = 212/393 (53%), Gaps = 11/393 (2%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
KL INGE V G+ +P TGE I IAE E VD AV+AA AF W + +
Sbjct: 3 KLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAE--WGQTTP 59
Query: 83 AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
R +LK AD+IEE+A+V A LE+ + GK +IP + R++AGAA + G
Sbjct: 60 KARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSG 119
Query: 143 EVLKMSRALQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
L L+G+T R+P+GVV I PWN+P M K++PALAAG +++KP+E TP
Sbjct: 120 --LAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITP 177
Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
L AL A LAK P GV+N++ G G T G + H + VS TGS G ++ A
Sbjct: 178 LTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTA 236
Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
S +K +ELGGK+P+++FDD D++ + +N G+ C A+ R+Y Q GIYD
Sbjct: 237 PS-IKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTL 295
Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGKPIGKK 378
+KL G P D + GP +R++ +E K G ++TGG+
Sbjct: 296 VEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGN 355
Query: 379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
GYY PT+ +D I + E+FGPV+++ F
Sbjct: 356 GYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSF 388
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 277 bits (711), Expect = 1e-89
Identities = 131/358 (36%), Positives = 189/358 (52%), Gaps = 14/358 (3%)
Query: 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK 119
D D AV+AA AF W + +ERR I+LK ADL+E + + G +WA
Sbjct: 1 DADQAVEAAAAAF--PAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAG 58
Query: 120 MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQ-GYTLREPIGVVGHIIPWNFPTTMFFM 178
++ AA LR A +I G + + ++EP+GVV I PWN P +
Sbjct: 59 F-NVDLAAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTR 117
Query: 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVV---PGFGPTAGAAIAS 235
++ LAAG T+++K +E +P + AG+P GVLNVV P P A+ +
Sbjct: 118 AIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIA 177
Query: 236 HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 295
H + KV+FTGST VGR + + AA +LKPV LELGGK+P ++ +D D++ AA+ AL G
Sbjct: 178 HPAVRKVNFTGSTRVGRIIAETAA-KHLKPVLLELGGKAPAIVLEDADLDAAANAALFGA 236
Query: 296 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIL 355
N G+IC+++ R+ V E I DEF +KL A+ G V G V DR+
Sbjct: 237 FLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAGP-----VVLGSLVSAAAADRVK 291
Query: 356 SYIEHGKREGATLLTGGKP-IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
++ +GA L+ GG G + PTI NVT DM I E FGPV+++++ K
Sbjct: 292 ELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVK 349
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 277 bits (710), Expect = 2e-89
Identities = 134/371 (36%), Positives = 192/371 (51%), Gaps = 17/371 (4%)
Query: 47 GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVL 106
G + + D DVD A A A W ER ++ + ADL+EEHA+ +A
Sbjct: 1 GAVLGEVGVADAADVDRAAARAAAA--QRAWAATPPRERAAVLRRAADLLEEHADEIADW 58
Query: 107 EALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHI 166
++G + A ++ A L AG + GE+L + R P+GVVG I
Sbjct: 59 IVRESGSIRPKAG-FEVGAAIGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVI 117
Query: 167 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP-----LIALYFAHLAKLAGVPDGVLNV 221
P+NFP + V+PALA G +++KP +TP +IA F AG+P GVL+V
Sbjct: 118 SPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFE----EAGLPAGVLHV 173
Query: 222 VPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDD 281
+PG G AG A+ ++ +SFTGST VGR+V +AA +LK VSLELGGK+ L++ DD
Sbjct: 174 LPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAG-RHLKKVSLELGGKNALIVLDD 231
Query: 282 VDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR 341
D++ AA G ++G+IC+A+ R V E + D + KL KAK VGDP V
Sbjct: 232 ADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVA 291
Query: 342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEI 401
GP ++ +Q DR+ + ++ GA L GG G + PT+ + V M EI
Sbjct: 292 LGPLINARQLDRVHAIVDDSVAAGARLEAGGT---YDGLFYRPTVLSGVKPGMPAFDEEI 348
Query: 402 FGPVMALMKFK 412
FGPV + F
Sbjct: 349 FGPVAPVTVFD 359
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 277 bits (710), Expect = 3e-89
Identities = 136/380 (35%), Positives = 199/380 (52%), Gaps = 17/380 (4%)
Query: 39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98
E +P TGE +AR+A +D++ A+ AA +AF P R I+L +EE
Sbjct: 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR--PMRALPAHRRAAILLHCVARLEE 58
Query: 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQG 153
E LA L+AGK A+ G++ A +T R A A +I+GEVL + QG
Sbjct: 59 RFEELAETIVLEAGKPIKDAR-GEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQG 117
Query: 154 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
R PIG V I P+NFP + KV+PA+AAGC ++KPA +TPL AL + G
Sbjct: 118 LVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETG 177
Query: 214 VPDGVLNVVPGFGPTAGAAI-ASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272
+P G +V+P A + + I +SFTGS VG + A K V LELGG
Sbjct: 178 LPKGAFSVLPC--SRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGG 232
Query: 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332
+ +++ D D++ AA + G + G+ C++ RV V +YDEF+ +LV + KA
Sbjct: 233 NAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKT 292
Query: 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTE 392
GDP D A GP + + + +R+ ++ GA LLTGGK + G +EPTI +V
Sbjct: 293 GDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGK---RDGALLEPTILEDVPP 349
Query: 393 DMLIAKNEIFGPVMALMKFK 412
DM + E+FGPV+ + +
Sbjct: 350 DMEVNCEEVFGPVVTVEPYD 369
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 275 bits (705), Expect = 3e-88
Identities = 138/397 (34%), Positives = 201/397 (50%), Gaps = 17/397 (4%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP--WPRF 80
K INGE+ +S SGKT E P GE I + ++ +AA A+D G WP
Sbjct: 3 KYLINGEWKES-SGKTIEVYSPIDGEVIGSVPALSALEIL---EAAETAYDAGRGWWPTM 58
Query: 81 SGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
ER + KFADL++E+ E +A L + GK A + ++ + +R ++
Sbjct: 59 PLEERIDCLHKFADLLKENKEEVANLLMWEIGKTLKDA-LKEVDRTIDYIRDTIEELKRL 117
Query: 141 HGEVLKM-----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
G+ L ++ REP+GVV I P+N+P + K+ PAL G T++ KPA
Sbjct: 118 DGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPA 177
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
Q L+ + A AG P GV+NVV G G G + +H ID +SFTGST+VG ++
Sbjct: 178 TQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLK 237
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
+ +K + LELGGK P ++ D D+ AA + G L G+ C A RV V E +
Sbjct: 238 KQHP---MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESV 294
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375
DE + L E+ VG P+D V P +D K D + I+ +GAT+L GG
Sbjct: 295 ADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGG-- 352
Query: 376 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+ G I PT+ VT DM +A E FGPV+ +++
Sbjct: 353 REGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVN 389
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 270 bits (694), Expect = 5e-87
Identities = 133/353 (37%), Positives = 180/353 (50%), Gaps = 7/353 (1%)
Query: 61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120
++ A+ A AF W + S AER ++ K ADL+ E + LA L L+ GK + A+
Sbjct: 1 IEAALDRAHAAFLA--WRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEAR- 57
Query: 121 GDIPGAANTLRYYA-GAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179
++ A RYYA A + E ++ + A + Y EP+GVV I+PWNFP F
Sbjct: 58 AEVEKCAWICRYYAENAEAFLADEPIE-TDAGKAYVRYEPLGVVLGIMPWNFPFWQVFRF 116
Query: 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDI 239
+P L AG T+++K A P AL L + AG P+GV + A IA +
Sbjct: 117 AAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVEAIIADPR-V 175
Query: 240 DKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK 299
V+ TGS GR V A NLK LELGG P ++ DD D++ A A+ G L N
Sbjct: 176 RGVTLTGSERAGRAVAAEAG-KNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNA 234
Query: 300 GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE 359
G+ C+A+ R V E +YDEF +K VE A VGDP D GP K D + +E
Sbjct: 235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVE 294
Query: 360 HGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
GATLL GGK G + PT+ T+VT M E+FGPV A++K K
Sbjct: 295 EAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVK 347
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 269 bits (690), Expect = 1e-85
Identities = 143/398 (35%), Positives = 213/398 (53%), Gaps = 18/398 (4%)
Query: 24 LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
L I GE + + +I+P E + R+++ KE + A++AA +AF+ W ++S
Sbjct: 39 LIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFE--TWKKWSP 94
Query: 83 AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM-GDIPGAANTLRYYAGAADKI- 140
+R I+L+ A +I + +AGK WA+ D A + L YYA K+
Sbjct: 95 EDRARILLRAAAIIRRRKHEFSAWLVKEAGK--PWAEADADTAEAIDFLEYYARQMLKLA 152
Query: 141 HGE-VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
G+ V Y P+GV I PWNFP + A+ AG T+++KPA TP
Sbjct: 153 DGKPVESRPGEHNRY-FYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTP 211
Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
+IA F + + AG+P GV+N VPG G G + H ++FTGS +VG ++ + AA
Sbjct: 212 VIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAA 271
Query: 260 TSN-----LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
LK V E+GGK +++ +D D++ AA+ + G+ C A SR V E
Sbjct: 272 KVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHED 331
Query: 315 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 374
+YDE +K+VE K VG+P D A GP +++ FD+I+SYIE GK EG L+ GG+
Sbjct: 332 VYDEVLEKVVELTKELTVGNPEDNAY-MGPVINQASFDKIMSYIEIGKEEG-RLVLGGEG 389
Query: 375 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
KGY+I+PTIF +V I + EIFGPV+A +K K
Sbjct: 390 DDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAK 427
|
Length = 514 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 265 bits (680), Expect = 8e-85
Identities = 136/382 (35%), Positives = 186/382 (48%), Gaps = 23/382 (6%)
Query: 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
I P G IA E V A++ AR A W ER+ I+ + +L+ + +
Sbjct: 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKG--WRAVPLEERKAIVTRAVELLAANTD 58
Query: 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA-----LQGYTL 156
+A G+ + A G+I G RY A+ E L R + Y
Sbjct: 59 EIAEELTWQMGRPIAQAG-GEIRGMLERARYMISIAE----EALADIRVPEKDGFERYIR 113
Query: 157 REPIGVVGHIIPWNFPTTMFFMKVS---PALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
REP+GVV I PWN+P + V+ PAL AG +I+K + QTPL FA AG
Sbjct: 114 REPLGVVLIIAPWNYP---YLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAG 170
Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
+P+GV V+ T+ A IA ID VSFTGS GR + +AAA V LELGGK
Sbjct: 171 LPEGVFQVLHLSHETSAALIADP-RIDHVSFTGSVAGGRAIQRAAA-GRFIKVGLELGGK 228
Query: 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333
P + D D++ AA+ + G FN G+ C + R+YV E IYD F + V K + +G
Sbjct: 229 DPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLG 288
Query: 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK--PIGK-KGYYIEPTIFTNV 390
DP DP+ GP V + D + + I +GA L G P K G Y+ PT+ TNV
Sbjct: 289 DPLDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNV 348
Query: 391 TEDMLIAKNEIFGPVMALMKFK 412
M + + E FGPV+ +MK K
Sbjct: 349 DHSMRVMREETFGPVVGIMKVK 370
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 263 bits (673), Expect = 9e-84
Identities = 128/378 (33%), Positives = 206/378 (54%), Gaps = 14/378 (3%)
Query: 40 ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99
+ +P GE I ++ D+ D + A+ AR ++ ER I+ + ADL+++
Sbjct: 2 DVHNPYDGEVIGKVPADDRADAEEALATARAGAEN--RRALPPHERMAILERAADLLKKR 59
Query: 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQGY 154
AE A + A + GK A+ ++ A +TLR A A++I GE + + S +
Sbjct: 60 AEEFAKIIACEGGKPIKDAR-VEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAW 118
Query: 155 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 214
T+REP+GVV I P+NFP + K++PA+A GC +++KPA +TPL AL A + AGV
Sbjct: 119 TIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGV 178
Query: 215 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 274
P+GVL VV G G A A+ + +SFTGS VG + A K ++LELGG +
Sbjct: 179 PEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANAG---GKRIALELGGNA 235
Query: 275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334
P+++ D D++ A + G ++ G++C++ R+YV E +YDEF + V K VGD
Sbjct: 236 PVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGD 295
Query: 335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDM 394
P D GP + ++ +R+ ++E GA LL GG+ G +PT+ +V D
Sbjct: 296 PLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGER---DGALFKPTVLEDVPRDT 352
Query: 395 LIAKNEIFGPVMALMKFK 412
++ E FGPV+ ++++
Sbjct: 353 KLSTEETFGPVVPIIRYD 370
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 258 bits (662), Expect = 4e-82
Identities = 133/378 (35%), Positives = 199/378 (52%), Gaps = 17/378 (4%)
Query: 40 ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99
E +P TGE + + G +E + A+ A + +R I+ K A L+E
Sbjct: 2 EVRNPYTGEVVGTVPAGTEEALREALALAA-----SYRSTLTRYQRSAILNKAAALLEAR 56
Query: 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQGY 154
E A L L++G ++ AA+ LR+ A A + GE +A + +
Sbjct: 57 REEFARLITLESGLCLKDT-RYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIF 115
Query: 155 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 214
TLREP+GVV I P+N P K++PA+AA +++KP+E+TPL A+Y A L AG+
Sbjct: 116 TLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGL 175
Query: 215 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 274
P +L+VV G G + +H D+D V+FTG VG+ + AAT+ K LELGG
Sbjct: 176 PPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAI---AATAGYKRQLLELGGND 232
Query: 275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334
PL++ DD D+ AA +A+ G N G+ C A R+ V E + DEF LVEK+ A VVGD
Sbjct: 233 PLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGD 292
Query: 335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDM 394
P DPA G +D++ +I + +E +GA +L G ++G PT+ +V D
Sbjct: 293 PMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGN---QRQGALYAPTVLDHVPPDA 349
Query: 395 LIAKNEIFGPVMALMKFK 412
+ E FGPV +++ K
Sbjct: 350 ELVTEETFGPVAPVIRVK 367
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 258 bits (662), Expect = 8e-82
Identities = 138/399 (34%), Positives = 201/399 (50%), Gaps = 17/399 (4%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
++L I+G+ V +G TF T++P T E + A+ D+D A+ AAR+AFD W R +
Sbjct: 1 SRLLIDGKLVAGSAG-TFPTVNPATEEVLGVAADATAADMDAAIAAARRAFDETDWSRDT 59
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
R + + D + H E L L + G + G + L + A A+
Sbjct: 60 ALRVRCLR-QLRDALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDDLGFAADLAESYA 118
Query: 142 -----GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
G M + RE +GVVG I PWNFP + K+ PALAAG T+++KPA
Sbjct: 119 WTTDLGVASPMGIPTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPAP 178
Query: 197 QTPLIALYFAHLAKLAG----VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252
TP A A L +L P GV+N+V GA +A +D VSFTGST GR
Sbjct: 179 DTPWCA---AVLGELIAEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGR 235
Query: 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 312
VM AA + LK V LELGGKS ++ DD D+ A MA + + G+ C ++R+ V
Sbjct: 236 AVMADAAAT-LKKVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVP 294
Query: 313 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 372
YDE + GDP DP GP + +Q DR+ SY++ EG GG
Sbjct: 295 RARYDEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGG 354
Query: 373 -KPIGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM 409
+P + +G+++EPT+ + + +A+ EIFGPV+ ++
Sbjct: 355 GRPADRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVI 393
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 253 bits (649), Expect = 1e-80
Identities = 114/325 (35%), Positives = 181/325 (55%), Gaps = 4/325 (1%)
Query: 89 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 148
+ K A I E A ++ L + GK+ A++ ++ A+ + Y A A + GE+++
Sbjct: 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGEIIQSD 59
Query: 149 RALQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 207
R + + +GV I+PWNFP + K++PAL G T+++KP+E TP A+ FA
Sbjct: 60 RPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAK 119
Query: 208 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 267
+ G+P GV N+V G G T G +A + + VS TGS G ++M AAA N+ V
Sbjct: 120 IVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAA-KNITKVC 178
Query: 268 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 327
LELGGK+P ++ DD D++ A + + N G++C + RVYVQ+GIYD+F +L E
Sbjct: 179 LELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM 238
Query: 328 KAWVVGDPFD-PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTI 386
+A G+P + + GP ++ +R+ + EGA + GGK + KGYY PT+
Sbjct: 239 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTL 298
Query: 387 FTNVTEDMLIAKNEIFGPVMALMKF 411
+V ++M I E FGPV+ ++ F
Sbjct: 299 LLDVRQEMSIMHEETFGPVLPVVAF 323
|
Length = 409 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 248 bits (634), Expect = 3e-77
Identities = 130/397 (32%), Positives = 202/397 (50%), Gaps = 15/397 (3%)
Query: 24 LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
L INGE V++ K +I+P E + +++ +E + A++AA +AF+ W +
Sbjct: 35 LVINGERVET-ENK-IVSINPCDKSEVVGTVSKASQEHAEHALQAAAKAFE--AWKKTDP 90
Query: 83 AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI-- 140
ER I+ K A ++ + L + GK + A ++ A + + YYA ++
Sbjct: 91 EERAAILFKAAAIVRRRRHEFSALLVKEVGKPWNEADA-EVAEAIDFMEYYARQMIELAK 149
Query: 141 HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
V Y + P GV I PWNFP + + G +++KPAE P+
Sbjct: 150 GKPVNSREGETNQY-VYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPV 208
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA- 259
IA F + + AG+P GV+ VPG G G + H ++FTGS +VG ++ + AA
Sbjct: 209 IAAKFVEILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAK 268
Query: 260 ----TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
+LK V E+GGK +++ +D D+ AA A G+ C A SR V E +
Sbjct: 269 VQPGQKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKV 328
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375
YDE ++ VE ++ VG P V GP +D+K F++I+ YIE GK EG L++GG
Sbjct: 329 YDEVVERFVEITESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIGKAEG-RLVSGGCGD 387
Query: 376 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
KGY+I PTIF +V +A+ EIFGPV+A ++
Sbjct: 388 DSKGYFIGPTIFADVDRKARLAQEEIFGPVVAFIRAS 424
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 246 bits (630), Expect = 3e-77
Identities = 132/392 (33%), Positives = 193/392 (49%), Gaps = 36/392 (9%)
Query: 43 DPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102
DP TG+ + + EDVD A+ AAR A W + S AERR ++ I E+ E
Sbjct: 2 DPATGQHLGSVPADTPEDVDEAIAAARAAQRE--WAKTSFAERRKVLRSLLKYILENQEE 59
Query: 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQ---------- 152
+ + D GK A +G+I +R+ HGE +AL+
Sbjct: 60 ICRVACRDTGKTMVDASLGEILVTCEKIRWTLK-----HGE-----KALRPESRPGGLLM 109
Query: 153 ----GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 208
EP+GVVG I+ WN+P + AL AG ++VK +EQ + +F +
Sbjct: 110 FYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSI 169
Query: 209 AKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 264
+ G ++ +V T A+ SH ID ++F GS VG++VM AAA S L
Sbjct: 170 IRECLAACGHDPDLVQLVTCLPET-AEALTSHPVIDHITFIGSPPVGKKVMAAAAES-LT 227
Query: 265 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 324
PV LELGGK P ++ DD D++ A + + G + G+ C+ RV V E IYD+ + L
Sbjct: 228 PVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILT 287
Query: 325 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGKKGY 380
++ +A G P D V G + +FDR+ + +GA LL GGK P +G+
Sbjct: 288 DRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGH 347
Query: 381 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
Y PT+ +VT DM IA+ E+FGPVM +MK
Sbjct: 348 YFPPTLLVDVTPDMKIAQEEVFGPVMVVMKAS 379
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 225 bits (577), Expect = 4e-69
Identities = 134/403 (33%), Positives = 201/403 (49%), Gaps = 37/403 (9%)
Query: 27 NGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERR 86
+GE+ G +I P GE IAR+ + ED + +KAA++AF W R A +R
Sbjct: 4 DGEWG--GGGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKE--W-RDVPAPKR 58
Query: 87 G-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAK-----MGDIPGAANTLRYYAGAADKI 140
G I+ + D + + E L L +L+ GK+ M DI + G + ++
Sbjct: 59 GEIVRQIGDALRKKKEALGKLVSLEMGKILPEGLGEVQEMIDI------CDFAVGLSRQL 112
Query: 141 HGEVLKMSRALQGYTLRE---PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
+G + R G+ + E P+GVVG I +NFP ++ + AL G ++ KP+
Sbjct: 113 YGLTIPSERP--GHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPT 170
Query: 198 TPLIAL----YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
TPL A+ A + + G+P + ++V G G G A+ + VSFTGST VGRQ
Sbjct: 171 TPLTAIAVTKIVARVLEKNGLPGAIASLVCG-GADVGEALVKDPRVPLVSFTGSTAVGRQ 229
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF----NKGEICVASSRV 309
V QA A + LELGG + +++ +D D+ D+A+ +LF G+ C + R+
Sbjct: 230 VGQAVA-ARFGRSLLELGGNNAIIVMEDADL----DLAVRAVLFAAVGTAGQRCTTTRRL 284
Query: 310 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 369
V E IYDE ++L + K +GDP D GP K D L+ IE K +G T+L
Sbjct: 285 IVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVL 344
Query: 370 TGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
GGK I G Y+EPTI D I K E F P++ ++KF
Sbjct: 345 FGGKVIDGPGNYVEPTIVE-GLSDAPIVKEETFAPILYVLKFD 386
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 221 bits (565), Expect = 1e-67
Identities = 125/393 (31%), Positives = 200/393 (50%), Gaps = 11/393 (2%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
+I G+F + SG +P T E ++A ++VD AV +AR+ F W + S
Sbjct: 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETF--LTWGQTSL 59
Query: 83 AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
A+R ++L++ L++EH + +A L + GK HS A GD+ + + G + G
Sbjct: 60 AQRTSVLLRYQALLKEHRDEIAELITAEHGKTHSDAL-GDVARGLEVVEHACGVNSLLKG 118
Query: 143 EVL-KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
E +++ + Y++R+P+GV I P+NFP + A+A G T ++KP+E+ P
Sbjct: 119 ETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSA 178
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
A+ A L AG PDGVLNVV G A + H D+ VSF GST +GR + ++
Sbjct: 179 AVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHT-TGSA 236
Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
+ K V G K+ +++ D D + AAD + G+ C+A S V G DE+
Sbjct: 237 HGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAA-VLVGAADEWVP 295
Query: 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY- 380
++ E+A+ +G DP GP + + DR+ S I G EGA +L G+ GY
Sbjct: 296 EIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYE 355
Query: 381 ---YIEPTIFTNVTEDMLIAKNEIFGPVMALMK 410
++ PT+ V M + EIFGPV+ +++
Sbjct: 356 EGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLE 388
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 221 bits (564), Expect = 4e-67
Identities = 121/400 (30%), Positives = 207/400 (51%), Gaps = 16/400 (4%)
Query: 24 LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
L I GE+VD+ ++ P E + A+ DK + + A++AA AF W +
Sbjct: 21 LVIGGEWVDTKERMV--SVSPFAPSEVVGTTAKADKAEAEAALEAAWAAF--KTWKDWPQ 76
Query: 83 AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKIH 141
+R ++LK ADL+ L + GK +W + + D+ A + +RYYA AA ++
Sbjct: 77 EDRARLLLKAADLLRRRRRELIATLTYEVGK--NWVEAIDDVAEAIDFIRYYARAALRLR 134
Query: 142 G--EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
+ + +G I PWNFP +F + +A G T+I KPAE
Sbjct: 135 YPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAV 194
Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
++ + AG P GV+ +PG G GA + H I ++FTGS + G+++ +AAA
Sbjct: 195 VVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAA 254
Query: 260 -----TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
+ K + +E GGK+ +++ + D + ++ +G+ C A+SR+ + +G
Sbjct: 255 RLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQG 314
Query: 315 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 374
Y+ ++L+++A+ VG P + GP +D +Q ++LSYIEHGK EG L+ GGK
Sbjct: 315 AYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKR 373
Query: 375 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKIS 414
+ +GY++ PT+ V IA+ EIFGPV++++++K
Sbjct: 374 LEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDD 413
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 216 bits (551), Expect = 2e-65
Identities = 125/397 (31%), Positives = 195/397 (49%), Gaps = 24/397 (6%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFD--HGPWPRFS 81
L I GE V + E P G + + + +DV R+AF P +
Sbjct: 6 LRIAGEKVSR--DRVIEVRYPYNGTVVGTVPKASVDDV-------RRAFAIAAAYRPTLT 56
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
ER I+ + A L+ E ++ L L++G L + ++ A+ L + A A +
Sbjct: 57 RYERSAILDRAAALLAARKEEISDLITLESG-LSKKDSLYEVGRVADVLTFAAAEALRDD 115
Query: 142 GEVLKMSRALQG-----YTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
G++ G +T REP+ GV+ I P+N P K++PA+A M+VKP+
Sbjct: 116 GQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPS 175
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
E+TPL ALY A + AG+P +L VV G + ++ +D V+FTG +G+ +
Sbjct: 176 EKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYI- 234
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
AA + + LELGG PL++ +D D++ AAD+A+ G N G+ C A R+ VQE +
Sbjct: 235 --AARAGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESV 292
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375
D F + LVEK +AW GDP DP+V G +D+ + + +GA LL G
Sbjct: 293 ADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGN--- 349
Query: 376 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+ G PT+ V M + + E FGPV +++F
Sbjct: 350 VRDGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFC 386
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 212 bits (542), Expect = 1e-63
Identities = 132/393 (33%), Positives = 191/393 (48%), Gaps = 14/393 (3%)
Query: 25 FINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
INGE ++ G+ IDP I ++ D EDVD A+ A AF W
Sbjct: 36 IINGEETET--GEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAF--AGWSATPVE 91
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
ER I+ K ADL+E + L L A +AGK + A ++ A + RYYA A ++ +
Sbjct: 92 ERAEILEKAADLLEANRGELIALAAAEAGKTLADA-DAEVREAIDFCRYYAAQARELFSD 150
Query: 144 VLKMSR--ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
L G L GV I PWNFP +F +++ ALAAG T+I KPAEQTPLI
Sbjct: 151 PELPGPTGELNGLEL-HGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLI 209
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ--AAA 259
A L AGVP VL +VPG G G A+ +H ID V FTGST+ + + + A
Sbjct: 210 AARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAER 269
Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
+ P+ E GGK+ +++ A + + G+ C A +Y+QE I + F
Sbjct: 270 DGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERF 329
Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG 379
+ L + VGDP+D + GP +DK + ++ E + E A L+ G
Sbjct: 330 IEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGE-AWLIAPAPLDDGNG 388
Query: 380 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
Y++ P I V L E+FGP++ +++FK
Sbjct: 389 YFVAPGIIEIVGIFDL--TTEVFGPILHVIRFK 419
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 205 bits (523), Expect = 1e-61
Identities = 117/370 (31%), Positives = 177/370 (47%), Gaps = 59/370 (15%)
Query: 69 RQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA---GKLHSWAKMGDIPG 125
+ AF P P S ERR + + L+ ++ + LA EA+ A + + +I
Sbjct: 8 KAAFLANPPP--SLEERRDRLDRLKALLLDNQDALA--EAISADFGHRSRHETLLAEILP 63
Query: 126 AANTLRYYAGAADKIHG-------EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178
+ +++ A + V + + +P+GVVG I+PWN+P ++
Sbjct: 64 SIAGIKH---ARKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYP---LYL 117
Query: 179 KVSP---ALAAGCTMIVKPAEQTP--------LIALYFA--HLAKLAGVPDGVLNVVPGF 225
+ P ALAAG +++KP+E TP L+A YF +A VV G
Sbjct: 118 ALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEYFDEDEVA-----------VVTG- 165
Query: 226 GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVN 285
G AA S + D + FTGST VGR VM+AAA NL PV+LELGGKSP +I D D+
Sbjct: 166 GADVAAAF-SSLPFDHLLFTGSTAVGRHVMRAAA-ENLTPVTLELGGKSPAIIAPDADLA 223
Query: 286 TAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ 345
AA+ G L N G+ CVA V V E +EF V AKA V P + P
Sbjct: 224 KAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEF----VAAAKAAVAK--MYPTLADNPD 277
Query: 346 ----VDKKQFDRILSYIEHGKREGATL--LTGGKPIGKKGYYIEPTIFTNVTEDMLIAKN 399
++++ + R+ +E + +GA + L + PT+ NVT+DM + +
Sbjct: 278 YTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRKLPPTLVLNVTDDMRVMQE 337
Query: 400 EIFGPVMALM 409
EIFGP++ ++
Sbjct: 338 EIFGPILPIL 347
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 203 bits (518), Expect = 1e-60
Identities = 125/376 (33%), Positives = 179/376 (47%), Gaps = 18/376 (4%)
Query: 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
TI+P TGE + ++VD A+ A F + + A+R ADL+E A
Sbjct: 5 TINPATGETVKTFTALTDDEVDAAIARAHARFRD--YRTTTFAQRARWANAAADLLEAEA 62
Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL--------KMSRALQ 152
+ +A L L+ GK + AK + A RYYA H E L A +
Sbjct: 63 DQVAALMTLEMGKTLASAK-AEALKCAKGFRYYAE-----HAEALLADEPADAAAVGASR 116
Query: 153 GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA 212
Y +P+GVV ++PWNFP +PAL AG ++K A P ALY A L + A
Sbjct: 117 AYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRA 176
Query: 213 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272
G PDG + G A AI + + TGS GR V A +K LELGG
Sbjct: 177 GFPDGCFQTLL-VGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAG-DEIKKTVLELGG 234
Query: 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332
P ++ D++ AA+ A+ + N G+ C+A+ R V +YD F +K V + A V
Sbjct: 235 SDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRV 294
Query: 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTE 392
GDP DP GP ++ D + ++ GAT+L GGK G++ PT+ T++T
Sbjct: 295 GDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITP 354
Query: 393 DMLIAKNEIFGPVMAL 408
DM + E+FGPV +L
Sbjct: 355 DMRLYTEEVFGPVASL 370
|
Length = 457 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 202 bits (516), Expect = 2e-57
Identities = 134/402 (33%), Positives = 196/402 (48%), Gaps = 39/402 (9%)
Query: 31 VDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIM 89
+ + G+ + P + +A D E V+ A+ AAR AF W R ER I+
Sbjct: 556 IINGEGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAF--PAWSRTPVEERAAIL 613
Query: 90 LKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR 149
+ ADL+E + L L +AGK A + ++ A + RYYA A ++ G
Sbjct: 614 ERAADLLEANRAELIALCVREAGKTLQDA-IAEVREAVDFCRYYAAQARRLFGA----PE 668
Query: 150 ALQGYT-----LR-EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
L G T LR GV I PWNFP +F +V+ ALAAG T+I KPAEQTPLIA
Sbjct: 669 KLPGPTGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAA 728
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
L AG+P VL ++PG G T GAA+ + I V+FTGST+ R + + A +
Sbjct: 729 EAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDG 788
Query: 264 KPVSL--ELGGKSPLL---------IFDDVDVNTAADMALLGILFNKGEICVASSRV-YV 311
V L E GG++ ++ + DDV V +A A G+ C A RV +V
Sbjct: 789 PIVPLIAETGGQNAMIVDSTALPEQVVDDV-VTSAFRSA--------GQRCSA-LRVLFV 838
Query: 312 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 371
QE I D + L VGDP + GP +D + + ++IE KRE L
Sbjct: 839 QEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKREARLLAQL 898
Query: 372 GKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
P G + G+++ PT F + + + E+FGP++ ++++K
Sbjct: 899 PLPAGTENGHFVAPTAFE--IDSISQLEREVFGPILHVIRYK 938
|
Length = 1038 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 192 bits (490), Expect = 1e-56
Identities = 125/382 (32%), Positives = 188/382 (49%), Gaps = 28/382 (7%)
Query: 40 ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAF-DHGPWPRFSGAERRGIMLKFADLIEE 98
E ++P + I + D +D A+ A F D W ER I+ + ADL+EE
Sbjct: 2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNW--LPAHERIAILERLADLMEE 59
Query: 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQG 153
A+ LA+L A + GK AK+ ++ A + + A ++ G + M S
Sbjct: 60 RADELALLIAREGGKPLVDAKV-EVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIA 118
Query: 154 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
+T REPIGVV I +N P + +V+PA+AAGC +IVKPA TPL L F L AG
Sbjct: 119 FTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEAG 178
Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDK----VSFTGSTDVGRQVMQAAATSNLKP---V 266
+P+G VP A+A + D SF GS VG + S L P
Sbjct: 179 LPEGWCQAVP-----CENAVAEKLVTDPRVAFFSFIGSARVGWML-----RSKLAPGTRC 228
Query: 267 SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 326
+LE GG +P+++ D++ + G ++ G++CV+ RV+V I D+F ++L
Sbjct: 229 ALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAA 288
Query: 327 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTI 386
A+ VVGDP DP GP + ++ DR+ ++ GA LL GGK + Y PT+
Sbjct: 289 AEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTTY--APTV 346
Query: 387 FTNVTEDMLIAKNEIFGPVMAL 408
+ D ++ EIFGPV+ +
Sbjct: 347 LLDPPRDAKVSTQEIFGPVVCV 368
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 189 bits (482), Expect = 1e-55
Identities = 113/369 (30%), Positives = 159/369 (43%), Gaps = 66/369 (17%)
Query: 77 WPRFSGAERRGIMLKFADLIEEH---------------------AEVLAVLEALD--AGK 113
+ AER + + I E+L VL ++
Sbjct: 14 LRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKH 73
Query: 114 LHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPT 173
L W K P T G KI EP GV I PWN+P
Sbjct: 74 LKKWMK----PKRVRTPLLLFGTKSKIR---------------YEPKGVCLIISPWNYPF 114
Query: 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAI 233
+ F + A+AAG T I+KP+E TP + A + + A D V V G A +
Sbjct: 115 NLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDEV-AVFEG-----DAEV 168
Query: 234 ASH---MDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 290
A + D + FTGS VG+ VM AAA +L V+LELGGKSP ++ + D+ AA
Sbjct: 169 AQALLELPFDHIFFTGSPAVGKIVMAAAA-KHLASVTLELGGKSPTIVDETADLKKAAKK 227
Query: 291 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVRQGPQ-- 345
G N G+ C+A V+V E + D F VE KA + G D A + P
Sbjct: 228 IAWGKFLNAGQTCIAPDYVFVHESVKDAF----VEHLKAEIEKFYGK--DAARKASPDLA 281
Query: 346 --VDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFG 403
V+ + FDR+ ++ +GA + GG+ YI PT+ TNVT DM I + EIFG
Sbjct: 282 RIVNDRHFDRLKGLLDDAVAKGAKVEFGGQ-FDAAQRYIAPTVLTNVTPDMKIMQEEIFG 340
Query: 404 PVMALMKFK 412
PV+ ++ ++
Sbjct: 341 PVLPIITYE 349
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 193 bits (491), Expect = 1e-55
Identities = 138/391 (35%), Positives = 197/391 (50%), Gaps = 11/391 (2%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
I G FV+S S + I+P T E ++++ E+ AV AA+QAF W
Sbjct: 117 LIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPL--WRNTPITT 174
Query: 85 RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
R+ +MLKF +LI ++ + LA+ + GK GDI + + G A GE
Sbjct: 175 RQRVMLKFQELIRKNMDKLAMNITTEQGKTLK-DSHGDIFRGLEVVEHACGMATLQMGEY 233
Query: 145 L-KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
L +S + Y++REP+GV I P+NFP + A+ G T I+KP+E+ P ++
Sbjct: 234 LPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASV 293
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
A LA AG+PDGVLN+V G T AI DI VSF GS G + AA
Sbjct: 294 ILAELAMEAGLPDGVLNIVHGTNDTVN-AICDDEDIRAVSFVGSNTAGMHIYARAAAKG- 351
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
K + +G K+ L+ D +++ + L G+ C+A S V V G +E KL
Sbjct: 352 KRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTV-VFVGDAKSWEDKL 410
Query: 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGKKG 379
VE+AKA V +P GP + K+ +RI I+ G +GA LL G+ P +KG
Sbjct: 411 VERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKG 470
Query: 380 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMK 410
+I PTI + VT DM K EIFGPV+ M+
Sbjct: 471 NFIGPTILSGVTPDMECYKEEIFGPVLVCMQ 501
|
Length = 604 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 187 bits (478), Expect = 4e-55
Identities = 110/355 (30%), Positives = 173/355 (48%), Gaps = 33/355 (9%)
Query: 64 AVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEAL--DAGKLHSWAKMG 121
V R+ F G S R+ + ++ E+ E + AL D GK + A +
Sbjct: 3 LVARLRETFLTGK--TRSLEWRKAQLKALKRMLTENEE--EIAAALYADLGKPPAEAYLT 58
Query: 122 DIPGAANTLRYY----AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177
+I + + V + + + Y + EP+GVV I PWN+P +
Sbjct: 59 EIAVVLGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLAL 118
Query: 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG--VPDGVLNVVPGFGPTAGAAIAS 235
+ A+AAG T+++KP+E P + A LAKL + VV G A A +A
Sbjct: 119 APLIGAIAAGNTVVLKPSELAPATS---ALLAKLIPKYFDPEAVAVVEGGVEVATALLAE 175
Query: 236 HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 295
D + FTGS VG+ VM+AAA +L PV+LELGGKSP ++ D ++ AA G
Sbjct: 176 PF--DHIFFTGSPAVGKIVMEAAA-KHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGK 232
Query: 296 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ----VDKKQF 351
N G+ C+A V V E I DE ++L + K + DP ++ P ++++ F
Sbjct: 233 FLNAGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-----KESPDYGRIINERHF 287
Query: 352 DRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 406
DR+ S ++ GK ++ GG+ + K+ YI PTI +V+ D + + EIFGP++
Sbjct: 288 DRLASLLDDGK-----VVIGGQ-VDKEERYIAPTILDDVSPDSPLMQEEIFGPIL 336
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 188 bits (481), Expect = 1e-52
Identities = 128/396 (32%), Positives = 192/396 (48%), Gaps = 42/396 (10%)
Query: 32 DSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIML 90
V G T ++P + + + E EDV+ A+ AA+ AF W AER I+
Sbjct: 562 GDVDGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPE--WSATPAAERAAILE 619
Query: 91 KFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKIHGEVLKMSR 149
+ ADL+E H L L +AGK + A + ++ A + LRYYA A R
Sbjct: 620 RAADLMEAHMPELFALAVREAGK--TLANAIAEVREAVDFLRYYAAQA-----------R 666
Query: 150 ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA 209
L +P+G V I PWNFP +F +++ AL AG T++ KPAEQTPLIA L
Sbjct: 667 RLLNGPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLL 726
Query: 210 KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL- 268
AGVP L ++PG G T GAA+ + I V FTGST+V R + + A + PV L
Sbjct: 727 HEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLI 786
Query: 269 -ELGGKSPLLI---------FDDVDVNTAADMALLGILFNKGEICVASSRV-YVQEGIYD 317
E GG++ +++ DV + +A D A G+ C A RV +QE + D
Sbjct: 787 AETGGQNAMIVDSSALPEQVVADV-IASAFDSA--------GQRCSA-LRVLCLQEDVAD 836
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG- 376
L +GDP+ + GP +D + I ++IE + G + P
Sbjct: 837 RVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAET 896
Query: 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+KG ++ PT+ + + + E+FGPV+ +++FK
Sbjct: 897 EKGTFVAPTLIE--IDSISDLEREVFGPVLHVVRFK 930
|
Length = 1208 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 180 bits (459), Expect = 2e-52
Identities = 110/349 (31%), Positives = 168/349 (48%), Gaps = 6/349 (1%)
Query: 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK 119
VD AV AAR AF W S ER I+ +FA+L++ + E LA L + + GK W
Sbjct: 1 QVDAAVAAARAAFPG--WAALSLEERAAILRRFAELLKANKEELARLISRETGK-PLWEA 57
Query: 120 MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179
++ A + A + GE + P GV+ P+NFP +
Sbjct: 58 QTEVAAMAGKIDISIKAYHERTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGH 117
Query: 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDI 239
+ PAL AG T++ KP+E TP +A L + AG+P GVLN+V G G G A+A+H I
Sbjct: 118 IVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQG-GRETGEALAAHEGI 176
Query: 240 DKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK 299
D + FTGS G + + A K ++LE+GG +PL+++D D++ AA + +
Sbjct: 177 DGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTA 236
Query: 300 GEICVASSRVYVQEGIY-DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYI 358
G+ C + R+ V +G D F ++LVE AK +G P GP + R L
Sbjct: 237 GQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQ 296
Query: 359 EHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA 407
+ G L + + ++ P I +VT+ + EIFGP++
Sbjct: 297 QDLLALGGEPLLAMERLVAGTAFLSPGII-DVTDAADVPDEEIFGPLLQ 344
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 181 bits (462), Expect = 3e-52
Identities = 125/390 (32%), Positives = 193/390 (49%), Gaps = 20/390 (5%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
L+ING+++ G+ FE+ +P +GE + + + VD AV+AAR AF W R S
Sbjct: 3 LWINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPA--WARLSFE 59
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
ER+ I+ +FA L+EE+ E LA + A + GK W ++ N + A + GE
Sbjct: 60 ERQAIVERFAALLEENKEELAEVIARETGKPL-WEAATEVTAMINKIAISIQAYHERTGE 118
Query: 144 VLKMSRALQGYT--LR-EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
+ LR P GVV P+NFP + + PAL AG T++ KP+E TP
Sbjct: 119 K---RSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPW 175
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
+A L + AG+P GVLN+V G G G A+A+H DID + FTGS + G + + A
Sbjct: 176 VAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAG 234
Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEF 319
K ++LE+GG +PL+I + D++ A + + + G+ C + R+ V +G D F
Sbjct: 235 QPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAF 294
Query: 320 EKKLVEKAKAWVVGDPF-DPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTGGKPIGK 377
+LV AK VG +P G + ++ +++ G +LL +
Sbjct: 295 LARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAG 354
Query: 378 KGYYIEPTIF--TNVTEDMLIAKNEIFGPV 405
G + P I T V E + E FGP+
Sbjct: 355 TG-LLTPGIIDVTGVAE---LPDEEYFGPL 380
|
Length = 487 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 176 bits (450), Expect = 8e-51
Identities = 94/275 (34%), Positives = 143/275 (52%), Gaps = 41/275 (14%)
Query: 153 GYTLREPIGVVGHIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPAEQTP--------LI 201
Y EP GVV I PWN+P F + ++P A+AAG T ++KP+E TP +I
Sbjct: 94 SYIYYEPYGVVLIIAPWNYP---FQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKII 150
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
F + + VV G + D + FTGS VG+ VM+AAA
Sbjct: 151 EETF---------DEEYVAVVEGGVEENQELLDQKFD--YIFFTGSVRVGKIVMEAAAK- 198
Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
+L PV+LELGGKSP ++ +D ++ AA + G N G+ CVA V V E + ++F K
Sbjct: 199 HLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIK 258
Query: 322 KLVEKAKAWVVGDPFDPAVRQGPQ----VDKKQFDRILSYIEHGKREGATLLTGGKPIGK 377
+L E+ K + DP + P +++K FDR+ +++GK ++ GG +
Sbjct: 259 ELKEEIKKFYGEDP-----LESPDYGRIINEKHFDRLAGLLDNGK-----IVFGGN-TDR 307
Query: 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+ YIEPTI NVT D + + EIFGP++ ++ +
Sbjct: 308 ETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYD 342
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 179 bits (456), Expect = 7e-50
Identities = 121/370 (32%), Positives = 181/370 (48%), Gaps = 37/370 (10%)
Query: 55 EGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKL 114
E + DV+ A++AA A W AER I+ + ADL+E L L +AGK
Sbjct: 146 EATEADVEQALEAAVAAAPI--WSATPPAERAAILERAADLMEAQMPQLMGLLVREAGKT 203
Query: 115 HSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTT 174
S A + ++ A + LRYYAG A R G P+G V I PWNFP
Sbjct: 204 LSNA-IAEVREAVDFLRYYAGQA-----------RDTFGNLTHRPLGPVVCISPWNFPLA 251
Query: 175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA 234
+F +++ ALAAG +++ KPAEQTPLIA L AGVP GVL ++PG G T GAA+
Sbjct: 252 IFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALT 311
Query: 235 SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL--ELGGKSPLLI---------FDDVD 283
+ + V FTGST+V R + + A +P+ L E GG++ +++ DV
Sbjct: 312 ADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADV- 370
Query: 284 VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQG 343
+ +A D A G+ C A + +QE + D L VG+P G
Sbjct: 371 LASAFDSA--------GQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVG 422
Query: 344 PQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIF 402
P +D + I +I+ + +G + P +KG ++ PT+ D L + E+F
Sbjct: 423 PVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELENLDEL--QREVF 480
Query: 403 GPVMALMKFK 412
GPV+ ++++K
Sbjct: 481 GPVLHVVRYK 490
|
Length = 769 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 173 bits (439), Expect = 5e-49
Identities = 115/372 (30%), Positives = 175/372 (47%), Gaps = 29/372 (7%)
Query: 50 IARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEAL 109
+ ++ + V A+ +A+QAF W ER + + ADL+E H L L
Sbjct: 65 VGQVFHANLAHVQAAIDSAQQAF--PTWNATPAKERAAKLDRLADLLELHMPELMALCVR 122
Query: 110 DAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPW 169
+AGK A + ++ A + RYYA + GE E GV I PW
Sbjct: 123 EAGKTIHNA-IAEVREAVDFCRYYAKQVRDVLGE-----------FSVESRGVFVCISPW 170
Query: 170 NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTA 229
NFP +F ++S ALAAG T+I KPAEQT LIA L + AG P G + ++PG G
Sbjct: 171 NFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADV 230
Query: 230 GAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL--ELGGKSPLLIFDDVDVNTA 287
GAA+ S I V+FTGST+V + + Q A PV L E GG++ ++ VD
Sbjct: 231 GAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMI----VDSTAL 286
Query: 288 ADMALLGIL---FNK-GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQG 343
+ + +L F+ G+ C A + VQE + D + + VG P G
Sbjct: 287 PEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTDVG 346
Query: 344 PQVDKKQFDRILSYIEHGKREGAT---LLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNE 400
P +D + +L++IEH + L + G ++ PT+F +D+ E
Sbjct: 347 PVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFE--LDDIAELSEE 404
Query: 401 IFGPVMALMKFK 412
+FGPV+ ++++K
Sbjct: 405 VFGPVLHVVRYK 416
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 170 bits (432), Expect = 2e-48
Identities = 110/367 (29%), Positives = 175/367 (47%), Gaps = 34/367 (9%)
Query: 59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEAL--DAGKLHS 116
+++D R F G R + + ++++ E A++EAL D G+
Sbjct: 5 DEIDSIHSRLRATFRSGK--TKDLEYRLWQLKQLYWAVKDNEE--AIVEALKKDLGRPPF 60
Query: 117 WAKMGDIPGAANTLRYYAGAADK-IHGEVLKMSRALQGYTL------REPIGVVGHIIPW 169
+ ++ G N + + K E K+ + +EP+GVV I PW
Sbjct: 61 ETLLTEVSGVKNDILHMLKNLKKWAKDE--KVKDGPLAFMFGKPRIRKEPLGVVLIIGPW 118
Query: 170 NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTA 229
N+P + + A+AAGCT+++KP+E TP A A L + VV G P
Sbjct: 119 NYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVP-KYLDPDAFQVVQGGVPET 177
Query: 230 GAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAAD 289
A + D K+ +TGS VGR + +AAA +L PV+LELGGKSP+++ + D+ AA
Sbjct: 178 TALLEQKFD--KIFYTGSGRVGRIIAEAAA-KHLTPVTLELGGKSPVIVTKNADLELAAK 234
Query: 290 MALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ---- 345
L G N G+ICVA V V +YDEF VE+ K + D F P
Sbjct: 235 RILWGKFGNAGQICVAPDYVLVDPSVYDEF----VEELKKVL--DEFYPGGANASPDYTR 288
Query: 346 -VDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 404
V+ + F+R+ S ++ K + ++ GG+ +I PTI ++V+ D + E+FGP
Sbjct: 289 IVNPRHFNRLKSLLDTTKGK---VVIGGEMDEAT-RFIPPTIVSDVSWDDSLMSEELFGP 344
Query: 405 VMALMKF 411
V+ ++K
Sbjct: 345 VLPIIKV 351
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 162 bits (413), Expect = 3e-45
Identities = 121/395 (30%), Positives = 194/395 (49%), Gaps = 16/395 (4%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
LFI+G++ G++F + +P T E + + A V+ AV AAR AF W R S
Sbjct: 1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFP--AWARLSLE 57
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
ER ++ +FA L+EE E LA + A + GK W ++ + A + GE
Sbjct: 58 ERIAVVQRFAALLEERKEALARVIARETGK-PLWETRTEVASMIGKVAISIKAYHERTGE 116
Query: 144 V---LKMSRALQGYTLR-EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
+ RA+ LR P GVV P+NFP + + PAL AG T++ KP+E TP
Sbjct: 117 SENPMPDGRAV----LRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTP 172
Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
+A L + AG+P GVLN+V G G A+A+H DID + FTGS++ G + + A
Sbjct: 173 WVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFA 231
Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DE 318
K ++LE+GG +PL++ + D++ A + + + G+ C + R+ V +G D
Sbjct: 232 GRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDA 291
Query: 319 FEKKLVEKAKAWVVGD-PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 377
F +LVE A+ VG +P G + + R+L+ G L + +
Sbjct: 292 FLARLVEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDP 351
Query: 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+ P I +VT + E FGP++ ++++
Sbjct: 352 GAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYD 385
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 162 bits (413), Expect = 5e-45
Identities = 116/427 (27%), Positives = 184/427 (43%), Gaps = 81/427 (18%)
Query: 24 LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
L I G+ V + G T + + P +A D V+ A++AA +A W R
Sbjct: 35 LVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEA--RKEWARMPF 90
Query: 83 AERRGIMLKFADLIEE-------------------HAEVLAVLEALD--------AGKLH 115
+R I LK ADL+ AE+ A E +D A +L+
Sbjct: 91 EDRAAIFLKAADLLSGKYRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELY 150
Query: 116 SWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNF---- 171
+ + G N L Y R L+G+ V + P+NF
Sbjct: 151 AQQPLSSPAGVWNRLEY----------------RPLEGF--------VYAVSPFNFTAIG 186
Query: 172 ---PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPT 228
PAL G ++ KP++ L + + AG+P GV+N VPG GP
Sbjct: 187 GNLAGA-------PALM-GNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPV 238
Query: 229 AGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-----NLKPVSLELGGKSPLLIFDDVD 283
G + + + + FTGST + + + + + E GGK+ L+ D
Sbjct: 239 VGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSAD 298
Query: 284 VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQG 343
V++ + G +G+ C A+SR YV E ++ E +++L+E+ K +GDP D + G
Sbjct: 299 VDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMG 358
Query: 344 PQVDKKQFDRILSYIEHGKRE-GATLLTGGKPIGKKGYYIEPTIF--TNVTEDMLIAKNE 400
+D+K FDRI YI+H K + A ++ GGK GY++EPT+ T+ ++ E
Sbjct: 359 AVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLM--TEE 416
Query: 401 IFGPVMA 407
IFGPV+
Sbjct: 417 IFGPVLT 423
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 2e-44
Identities = 115/398 (28%), Positives = 192/398 (48%), Gaps = 19/398 (4%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
K + +GE+ S SGK+ +P T + ++ +E+V+ A+++A+ A W +
Sbjct: 17 KYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAA--QKAWAKTPL 74
Query: 83 AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
+R ++ K A +++EH +A + K A ++ + + + Y A +I G
Sbjct: 75 WKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVT-EVVRSGDLISYTAEEGVRILG 133
Query: 143 E-VLKMSRALQG-----YTL--REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194
E +S + G Y L + P+GVV I P+N+P + K++PAL AG +++KP
Sbjct: 134 EGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKP 193
Query: 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254
Q + AL+ H LAG P G+++ V G G G + H ++ +SFTG D G +
Sbjct: 194 PTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAI 252
Query: 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
+ A + P+ +ELGGK ++ +D D++ AA + G G+ C A V V E
Sbjct: 253 SKKAG---MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMES 309
Query: 315 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 374
+ D +K+ K VG P D P V + + I + K +GAT K
Sbjct: 310 VADALVEKVNAKVAKLTVGPPEDDC-DITPVVSESSANFIEGLVMDAKEKGATFCQEWK- 367
Query: 375 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
++G I P + NV DM IA E FGPV+ +++
Sbjct: 368 --REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIN 403
|
Length = 496 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 160 bits (405), Expect = 2e-44
Identities = 111/373 (29%), Positives = 169/373 (45%), Gaps = 15/373 (4%)
Query: 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
+++P TGE ++ + +D++ A++ A F W + R + + +
Sbjct: 11 SVNPATGEQLSVLPWAGADDIENALQLAAAGFRD--WRETNIDYRAQKLRDIGKALRARS 68
Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG-EVLKMSRAL----QGYT 155
E +A + + GK + A+ ++ +AN +YA HG +LK L Q
Sbjct: 69 EEMAQMITREMGKPINQAR-AEVAKSANLCDWYAE-----HGPAMLKAEPTLVENQQAVI 122
Query: 156 LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 215
P+G + I+PWNFP P L AG ++K A A A + K AG+P
Sbjct: 123 EYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIP 182
Query: 216 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP 275
GV + I + I V+ TGS G + A A + LK LELGG P
Sbjct: 183 QGVYGWLNADNDGVSQMI-NDSRIAAVTVTGSVRAGAAI-GAQAGAALKKCVLELGGSDP 240
Query: 276 LLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335
++ +D D+ A A+ G N G++C A+ R ++EGI F ++ V A A +GDP
Sbjct: 241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDP 300
Query: 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDML 395
D GP D + +E EGA LL GG+ I G Y PT+ NVT +M
Sbjct: 301 RDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMT 360
Query: 396 IAKNEIFGPVMAL 408
+ E+FGPV A+
Sbjct: 361 AFREELFGPVAAI 373
|
Length = 462 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 154 bits (392), Expect = 3e-42
Identities = 109/397 (27%), Positives = 186/397 (46%), Gaps = 21/397 (5%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
++ GE+ +G +++P + IA + E ED + ++A +A W + +
Sbjct: 24 YVGGEW--RANGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAK--IWMQVPAPK 79
Query: 85 RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
R I+ + D + + L L +L+ GK+ + +G++ + + G + +++G +
Sbjct: 80 RGEIVRQIGDALRAKLDYLGRLVSLEMGKILA-EGIGEVQEIIDMCDFAVGLSRQLNGSI 138
Query: 145 LKMSRALQGYTLRE---PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
+ R + + E P+G+VG I +NFP + AL G ++ K A TPLI
Sbjct: 139 IPSERP--NHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196
Query: 202 ALYFAHLAKLAGV------PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
+ L +A V P + G G G AIA I VSFTGS+ VG ++
Sbjct: 197 TIAMTKL--VAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVG-LMV 252
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
Q + LEL G + +++ DD D+ A L + G+ C R+ + E I
Sbjct: 253 QQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESI 312
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375
YD+ ++L+ K +GDP + GP + IE K +G +LTGG I
Sbjct: 313 YDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAI 372
Query: 376 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+G +++PTI ++ D + K E+FGPV+ +MKFK
Sbjct: 373 ESEGNFVQPTI-VEISPDADVVKEELFGPVLYVMKFK 408
|
Length = 508 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 151 bits (384), Expect = 4e-41
Identities = 83/260 (31%), Positives = 132/260 (50%), Gaps = 9/260 (3%)
Query: 153 GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA 212
Y + EP+GVV I WN+P + + ++ A+AAG T+++KP+E +P + A L
Sbjct: 103 SYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLL-TK 161
Query: 213 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272
+ + V+ G G + D + FTGS VG+ VMQAAA NL P +LELGG
Sbjct: 162 YLDPSYVRVIEG-GVEVTTELLKE-PFDHIFFTGSPRVGKLVMQAAA-ENLTPCTLELGG 218
Query: 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332
KSP+++ ++ AA G N G+ CVA V V I D+F + L E K +
Sbjct: 219 KSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEF-F 277
Query: 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTE 392
G+ + V++ R+ I K G ++ GG+ + + Y+ PTI N
Sbjct: 278 GEDPKKSEDYSRIVNEFHTKRLAELI---KDHGGKVVYGGE-VDIENKYVAPTIIVNPDL 333
Query: 393 DMLIAKNEIFGPVMALMKFK 412
D + + EIFGP++ ++ ++
Sbjct: 334 DSPLMQEEIFGPILPILTYE 353
|
Length = 493 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 144 bits (365), Expect = 1e-38
Identities = 107/364 (29%), Positives = 172/364 (47%), Gaps = 51/364 (14%)
Query: 64 AVKAARQAFDHGPWPRFSGAERRGIMLK-FADLIEEHAEVLAVLEAL--DAGKLHSWAKM 120
AV+ AR+AF G + E R L+ ++EE+ + ++EAL D K A +
Sbjct: 3 AVRRAREAFSSG---KTRPLEFRIQQLEALLRMLEENED--EIVEALAKDLRKPKFEAVL 57
Query: 121 GDIPGAANTLRYYAGAADKIH--GEVLKMSRALQG-----YTLREPIGVVGHIIPWNFPT 173
+I N ++Y A + + + + L Y +EP+GVV I WN+P
Sbjct: 58 SEILLVKNEIKY---AISNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPL 114
Query: 174 TMFFMKVSPALAAGCTMIVKPAEQTP----LIA-LYFAHLAK------LAGVPDGVLNVV 222
+ + + A+AAG +++KP+E +P L+A L +L K L GV + +
Sbjct: 115 QLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKYLDKECYPVVLGGVEETTELLK 174
Query: 223 PGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV 282
F D + +TGST VG+ VMQAAA +L PV+LELGGKSP +
Sbjct: 175 QRF--------------DYIFYTGSTSVGKIVMQAAA-KHLTPVTLELGGKSPCYVDKSC 219
Query: 283 DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQ 342
D++ AA G N G+ C+A V + ++F + L + K + DP +
Sbjct: 220 DIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDPKESP-DY 278
Query: 343 GPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIF 402
G ++ + F R+ + GK + GG+ +K YI PT+ T+V + + EIF
Sbjct: 279 GRIINDRHFQRLKKLLSGGK-----VAIGGQ-TDEKERYIAPTVLTDVKPSDPVMQEEIF 332
Query: 403 GPVM 406
GP++
Sbjct: 333 GPIL 336
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 145 bits (368), Expect = 1e-38
Identities = 117/394 (29%), Positives = 181/394 (45%), Gaps = 16/394 (4%)
Query: 24 LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
L I GE V + SG+ + P +A+ +E + AV+AA A W
Sbjct: 34 LVIGGEEVWT-SGERIYQVSPHNHQAVLAKATNATEELANKAVEAALDAKKE--WSLLPF 90
Query: 83 AERRGIMLKFADLI--EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
+R I LK ADL+ AE+LA L K A++ + + R+ A A ++
Sbjct: 91 YDRAAIFLKAADLLSGPYRAEILAAT-MLGQSKTVYQAEIDAVAELIDFFRFNAKYAREL 149
Query: 141 HGEVLKMSRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
+ + + T P+ G V I P+NF + +PAL G T+I KP++
Sbjct: 150 YEQQPISAPGEWNRTEYRPLEGFVYAISPFNFTAIAGNLAGAPALM-GNTVIWKPSDTAM 208
Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
L + + AG+P GV+N VPG GP + + D+ + FTGST + + + A
Sbjct: 209 LSNYLVMRILEEAGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVA 268
Query: 260 TS-----NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
+ N + E GGK ++ DV + G +G+ C A SR+YV
Sbjct: 269 QNLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPHS 328
Query: 315 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR--EGATLLTGG 372
++ F+ +L+ + VGDP D G +D+K F +I+ YIEH K T+L GG
Sbjct: 329 LWPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGG 388
Query: 373 KPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 406
K GY++EPT+ + + K EIFGPV+
Sbjct: 389 KYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVL 422
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 140 bits (355), Expect = 5e-36
Identities = 121/390 (31%), Positives = 190/390 (48%), Gaps = 50/390 (12%)
Query: 43 DPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-WPRFSGAERRGIMLKFADLIEEHAE 101
DPR + + + E +V+ A+++A A P W AER I+ + ADL+E +
Sbjct: 668 DPR--DIVGYVREATPAEVEQALESAVNA---APIWFATPPAERAAILERAADLMEAQMQ 722
Query: 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG-AADKIHGEVLKMSRALQGYTLREPI 160
L L +AGK S A + ++ A + LRYYAG D + T R P+
Sbjct: 723 TLMGLLVREAGKTFSNA-IAEVREAVDFLRYYAGQVRDDFDND-----------THR-PL 769
Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 220
G V I PWNFP +F +V+ ALAAG +++ KPAEQTPLIA + AGVP GV+
Sbjct: 770 GPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQ 829
Query: 221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT---SNLKPVSL--ELGGKSP 275
++PG G T GAA+ + + V FTGST+V R + + A +P+ L E GG++
Sbjct: 830 LLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIAETGGQNA 889
Query: 276 LLIFD----------DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 325
+I D DV + +A D A G+ C A + +Q+ + D K L
Sbjct: 890 -MIVDSSALTEQVVADV-LASAFDSA--------GQRCSALRVLCLQDDVADRTLKMLRG 939
Query: 326 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKGYYI 382
+G+P + GP +D + I +I+ + +G + + + G ++
Sbjct: 940 AMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFV 999
Query: 383 EPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
PT+ + D L K E+FGPV+ ++++
Sbjct: 1000 PPTLIELDSFDEL--KREVFGPVLHVVRYN 1027
|
Length = 1318 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 133 bits (336), Expect = 8e-35
Identities = 88/263 (33%), Positives = 126/263 (47%), Gaps = 22/263 (8%)
Query: 158 EPIGVVGHIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPAEQTPLIALYFAHLAKLAG- 213
EP+GVV I WNFP F + + P A+AAG +++KP+E P + A LAKL
Sbjct: 100 EPLGVVLVISAWNFP---FLLSLEPVIGAIAAGNAVVLKPSELAPATS---ALLAKLIPE 153
Query: 214 -VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272
+ + V+ G G A+ DK+ FTGS VGR +M AAA +L PV+LELGG
Sbjct: 154 YLDTKAIKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIM-AAAAKHLTPVTLELGG 210
Query: 273 KSPLLIFDDVDVNTAADMALLGIL-FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331
K P+++ VD+ A G N G+ C+A V V+E L + +
Sbjct: 211 KCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAPTLIDALKNTLEKFF 270
Query: 332 VGDPF--DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTN 389
+P R V+ F R LS + ++ GG+ +K YIEPTI +
Sbjct: 271 GENPKESKDLSR---IVNSHHFQR-LSRLLDDPSVADKIVHGGE-RDEKNLYIEPTILLD 325
Query: 390 VTEDMLIAKNEIFGPVMALMKFK 412
D I EIFGP++ ++ K
Sbjct: 326 PPLDSSIMTEEIFGPLLPIITVK 348
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 5e-30
Identities = 111/426 (26%), Positives = 178/426 (41%), Gaps = 59/426 (13%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH-----GPWPR 79
++ G + SG DP TGE + R+ +DLA AF G R
Sbjct: 8 YVAGRWQAG-SGAGTPLFDPVTGEELVRV---SATGLDLA-----AAFAFAREQGGAALR 58
Query: 80 -FSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD 138
+ A+R ++ +++ + + + ++G + + + DI G TL YYA
Sbjct: 59 ALTYAQRAALLAAIVKVLQANRDAYYDIATANSGTTRNDSAV-DIDGGIFTLGYYAKLGA 117
Query: 139 KI-------HGEVLKMSR--ALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGC 188
+ GE +++ + A QG + P GV I +NFP + K +PAL AG
Sbjct: 118 ALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGV 177
Query: 189 TMIVKPAEQTPLIALYFAHLAKLAGV-PDGVLNVVPGFGPTAGAAIASHMD-IDKVSFTG 246
+IVKPA T + AG+ P G L+VV G + A + H+ D VSFTG
Sbjct: 178 PVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCG----SSAGLLDHLQPFDVVSFTG 233
Query: 247 STDVGRQ------VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL---- 296
S + V+Q + N++ SL S LL D + A D+ + ++
Sbjct: 234 SAETAAVLRSHPAVVQRSVRVNVEADSL----NSALLGPDAAPGSEAFDLFVKEVVREMT 289
Query: 297 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILS 356
G+ C A R++V E +YD + L + VG+P + VR GP V + Q + +
Sbjct: 290 VKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRA 349
Query: 357 YIEHGKREGATLLTGG---KPIGK---KGYYIEPTIFTNVTEDMLIAK----NEIFGPVM 406
+ R A +L G + + PT+ D A E+FGPV
Sbjct: 350 GLAA-LRAQAEVLFDGGGFALVDADPAVAACVGPTLL--GASDPDAATAVHDVEVFGPVA 406
Query: 407 ALMKFK 412
L+ ++
Sbjct: 407 TLLPYR 412
|
Length = 521 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 119 bits (299), Expect = 2e-29
Identities = 89/267 (33%), Positives = 133/267 (49%), Gaps = 27/267 (10%)
Query: 158 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP-- 215
EP+GVV WNFP + + A+AAG +++KP+E P + + A A +P
Sbjct: 107 EPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLA-----ANIPKY 161
Query: 216 --DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
+ V+ G GP G + H DK+ FTGS VGR +M AAA +L PV+LELGGK
Sbjct: 162 LDSKAVKVIEG-GPAVGEQLLQH-KWDKIFFTGSPRVGRIIMTAAA-KHLTPVALELGGK 218
Query: 274 SPLLIFDDVDVNTAADMALLGILFNK-----GEICVASSRVYVQEG---IYDEFEKKLVE 325
P I D + + +A+ I+ K G+ C+A V V+E I E K ++
Sbjct: 219 CP-CIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIK 277
Query: 326 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPT 385
K + A ++KK F R+ + ++ R A+++ GG I +K +IEPT
Sbjct: 278 KFFGENPRESKSMA----RILNKKHFQRLSNLLKD-PRVAASIVHGGS-IDEKKLFIEPT 331
Query: 386 IFTNVTEDMLIAKNEIFGPVMALMKFK 412
I N D I EIFGP++ ++ K
Sbjct: 332 ILLNPPLDSDIMTEEIFGPLLPIITVK 358
|
Length = 484 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 8e-24
Identities = 111/422 (26%), Positives = 166/422 (39%), Gaps = 56/422 (13%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
++ G++ +G D TGE +AR++ + D AV AR+ GP R
Sbjct: 4 YVAGQWHAG-TGDGRTLHDAVTGEVVARVS-SEGLDFAAAVAYARE--KGGPALRALTFH 59
Query: 85 RRGIMLK-FADLIEEHAEVLAVLEALDAG-KLHSWAKMGDIPGAANTLRYYAGAADK--- 139
R MLK A + E E L L A + SW DI G TL YA +
Sbjct: 60 ERAAMLKALAKYLMERKEDLYALSAATGATRRDSWI---DIDGGIGTLFAYASLGRRELP 116
Query: 140 -----IHGEVLKMSR--ALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191
+ G+V +S+ G + P GV HI +NFP K +PAL AG +I
Sbjct: 117 NAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVI 176
Query: 192 VKPAEQTPLIALYFAHLAKLAGV-PDGVLNVVPGFGPTAGAAIASHMDI-DKVSFTGSTD 249
VKPA T + +G+ P+G L ++ G + + H+ D V+FTGS
Sbjct: 177 VKPATATAYLTEAVVKDIVESGLLPEGALQLICG----SVGDLLDHLGEQDVVAFTGSAA 232
Query: 250 VGRQV-MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK--------- 299
++ + + E + ++ D LF K
Sbjct: 233 TAAKLRAHPNIVARSIRFNAEADSLNAAILGPDA----TPGTPEFD-LFVKEVAREMTVK 287
Query: 300 -GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYI 358
G+ C A R +V E D + L + VVGDP VR GP V ++Q + + + +
Sbjct: 288 AGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAV 347
Query: 359 EHGKREGATLLTGGKPI-------GKKGYYIEPTIFTNVTEDMLIAKN----EIFGPVMA 407
A ++ GG +KG + PT+ + +D A E FGPV
Sbjct: 348 AT-LLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLL--LCDDPDAATAVHDVEAFGPVAT 404
Query: 408 LM 409
LM
Sbjct: 405 LM 406
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 1e-23
Identities = 78/361 (21%), Positives = 132/361 (36%), Gaps = 39/361 (10%)
Query: 73 DHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRY 132
R + +R + + + + +A L GK W +I G LR
Sbjct: 11 STKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGK--GWMFAENICGDQVQLRA 68
Query: 133 YA--GAADKIH---GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAG 187
A + +I G L Q + R P G V I +NFP + ++++ ALA G
Sbjct: 69 RAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMG 128
Query: 188 CTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
+IVKP ++ L AG+ + A+ H + V FTGS
Sbjct: 129 NPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGKTMQALLLHPNPKMVLFTGS 188
Query: 248 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDV------NTAADMALLGILFNKGE 301
+ V ++ A + + LEL G + ++ D DM G+
Sbjct: 189 SRVAEKLALDAKQA---RIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTA-----CSGQ 240
Query: 302 ICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHG 361
C A S ++V E + + LVEK KA + + + + Q L+ I H
Sbjct: 241 KCTAQSMLFVPE---NWSKTPLVEKLKALLARRKLEDLL-----LGPVQTFTTLAMIAHM 292
Query: 362 KREGATLLTGGKPIGKK-------GYYIEPTIFTNVTEDMLIAK---NEIFGPVMALMKF 411
+ ++L K G + +F + E + + EIFGP ++++
Sbjct: 293 ENLLGSVLLFSGKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEY 352
Query: 412 K 412
K
Sbjct: 353 K 353
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 94.3 bits (234), Expect = 6e-21
Identities = 77/257 (29%), Positives = 126/257 (49%), Gaps = 16/257 (6%)
Query: 158 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 217
EP+GVV I WN+P + V A++AG +++KP+E P + A L +
Sbjct: 111 EPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQYLDSS- 169
Query: 218 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277
+ VV G A + D K+ +TGS+ +GR +M AAA +L PV LELGGKSP++
Sbjct: 170 AVRVVEGAVTETTALLEQKWD--KIFYTGSSKIGRVIM-AAAAKHLTPVVLELGGKSPVV 226
Query: 278 IFDDVDVNTAADMALLGIL-FNKGEICVASSRVYVQEGIYDEFEKKLVEKAK----AWVV 332
+ D D+ + G N G+ C++ + + E+ K+++ K +
Sbjct: 227 VDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTK----EYAPKVIDAMKKELETFYG 282
Query: 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTE 392
+P + + V+ FDR LS + K ++ GG+ ++ I PTI +V
Sbjct: 283 KNPME-SKDMSRIVNSTHFDR-LSKLLDEKEVSDKIVYGGEK-DRENLKIAPTILLDVPL 339
Query: 393 DMLIAKNEIFGPVMALM 409
D LI EIFGP++ ++
Sbjct: 340 DSLIMSEEIFGPLLPIL 356
|
Length = 484 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 93.7 bits (233), Expect = 1e-20
Identities = 104/409 (25%), Positives = 162/409 (39%), Gaps = 34/409 (8%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
+++GE+ + G+ D TGE +AR+ + DV AV AR+ GP R
Sbjct: 4 YLSGEWR-TGQGEGVPVRDASTGEVLARVT-SEGLDVAAAVAWAREV--GGPALRALTFH 59
Query: 85 RRGIMLK-FADLIEEHAEVLAVLEA-LDAGKLHSWAKMGDIPGAANTLRYYAGAADK--- 139
R MLK A + E E L L A A + +W DI G TL Y+ +
Sbjct: 60 ERARMLKALAQYLSERKEALYALAATTGATRRDNWV---DIDGGIGTLFTYSSLGRRELP 116
Query: 140 -----IHGEVLKMSR--ALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191
E +S+ + QG + P GV I +NFP K +PA AG +
Sbjct: 117 DANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTL 176
Query: 192 VKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDI-DKVSFTGSTD 249
KPA T +A +G +P+G L ++ G +AG + H+D D V+FTGS
Sbjct: 177 AKPATPTAYVAEALVRTMVESGLLPEGSLQLICG---SAGD-LLDHLDHRDVVAFTGSAA 232
Query: 250 VGRQV-MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK-----GEIC 303
++ + E + ++ +D + + + G+ C
Sbjct: 233 TADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKC 292
Query: 304 VASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR 363
A RV V + + + K L + V+GDP + V GP V +Q + + +
Sbjct: 293 TAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLA 352
Query: 364 EGATLLTGGKPIGKKGYYIEPTIFTNVTEDM-LIAKNEIFGPVMALMKF 411
GA + GG P G + PT+ + E FGPV +
Sbjct: 353 AGAEVRLGG-PGRLDGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPY 400
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 84.9 bits (211), Expect = 6e-18
Identities = 100/378 (26%), Positives = 140/378 (37%), Gaps = 56/378 (14%)
Query: 61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL---AVLE-ALDAGKLHS 116
VD A AA AF+ + S A R + AD IE + L A E L +L
Sbjct: 1 VDAAAAAAAAAFE--SYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARL-- 56
Query: 117 WAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--RALQGYT------LRE---PIGVVGH 165
G++ LR +A + G L A LR P+G V
Sbjct: 57 ---QGELGRTTGQLRLFADLVRE--GSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAV 111
Query: 166 IIPWNFPTTMFFMKVS-----PALAAGCTMIVK--PA--EQTPLIALYFAHLAKLAGVPD 216
NFP V+ ALAAGC ++VK PA + L+A + G+P
Sbjct: 112 FGASNFP---LAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPA 168
Query: 217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL-KPVSLELGGKSP 275
GV +++ G G G A+ H I V FTGS GR + AAA P ELG +P
Sbjct: 169 GVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNP 228
Query: 276 LLIFDDVDVNTAADMA--LLG-ILFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAWV 331
+ I +A +G + G+ C V V G D F L E A
Sbjct: 229 VFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAP 288
Query: 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVT 391
P + + + + + + + G +L GG + G PT+F V
Sbjct: 289 AQTMLTPGIAEAYR---QGVEALAA------APGVRVLAGG-AAAEGGNQAAPTLFK-VD 337
Query: 392 EDMLIAK----NEIFGPV 405
+A E+FGP
Sbjct: 338 AAAFLADPALQEEVFGPA 355
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 80.3 bits (199), Expect = 3e-16
Identities = 125/451 (27%), Positives = 172/451 (38%), Gaps = 114/451 (25%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH-----GPWPR 79
++ G + G+ D TGE +AR+ E +D A A + GP R
Sbjct: 8 YVAGRWQTG-QGEGRPLHDAVTGEPVARV---SSEGLDFA-----AALAYAREVGGPALR 58
Query: 80 FSGAERRGIMLK-FADLIEEHAEVLAVLEALD-AGKLHSWAKMGDIPGAANTLRYYAGAA 137
R MLK A + E E L L A A + SW DI G TL YA
Sbjct: 59 ALTFHERAAMLKALAKYLLERKEELYALSAQTGATRRDSWI---DIEGGIGTLFTYASKG 115
Query: 138 ------DKIH--GEVLKMSRALQG-------YTLREPIGVVGHIIPWNFPTTMFFMKVSP 182
D + GEV +S+ G T E GV HI +NFP K++P
Sbjct: 116 RRELPNDTVLVEGEVEPLSK--GGTFAGRHILTPLE--GVAVHINAFNFPVWGMLEKLAP 171
Query: 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLA--------GVPDGVLNVVPGFGPTAGAAIA 234
A AG IVKPA T A+L + +P+G L ++ G +AG +
Sbjct: 172 AFLAGVPAIVKPATAT-------AYLTEAVVRLIVESGLLPEGALQLICG---SAG-DLL 220
Query: 235 SHMDI-DKVSFTGSTDVGRQVMQAAATSN-LKPVSLELGGKSPLLIFDDVDVNTAAD--- 289
H+D D V+FTGS AAT+ L+ P ++ + V AD
Sbjct: 221 DHLDGQDVVTFTGS----------AATAQKLR--------AHPNVVANSVPFTAEADSLN 262
Query: 290 MALLGI----------LFNK----------GEICVASSRVYVQEGIYDEFEKKLVEKAKA 329
A+LG LF K G+ C A R V + D + L +
Sbjct: 263 AAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEALRARLAK 322
Query: 330 WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIG---KKGYYI 382
VVGDP VR G +Q + + + A ++ GG +G +KG +
Sbjct: 323 VVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFF 381
Query: 383 EPTIFTNVTEDMLIAKN----EIFGPVMALM 409
PT+ +D L A E FGPV LM
Sbjct: 382 PPTLLYC--DDPLEAPAVHDVEAFGPVSTLM 410
|
Length = 675 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 58.8 bits (142), Expect = 2e-09
Identities = 60/289 (20%), Positives = 93/289 (32%), Gaps = 35/289 (12%)
Query: 80 FSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS------WAKMGDIPGAAN----T 129
+R I+ A+ + + + LA + G A MG T
Sbjct: 13 NHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDT 72
Query: 130 LRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT 189
R + I +L + + Y PIGV HI+P P + + +A
Sbjct: 73 ERGITASVGHIQDVLLPDN--GETYVRAFPIGVTMHILPSTNPLSGITSALR-GIATRNQ 129
Query: 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA----SHMDIDKVSFT 245
I +P P L A ++ + P +A SH ID + T
Sbjct: 130 CIFRPHPSAPFTN-RALALLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVAT 188
Query: 246 GSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA 305
G D V A S PV G SP+++ + D A+ F+ C +
Sbjct: 189 GGRDA---VDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFD-QNACAS 244
Query: 306 SSRVYVQEGIYD----EFEKKLVE---------KAKAWVVGDPFDPAVR 341
+YV + + D EF+ KLV K + FD
Sbjct: 245 EQNLYVVDDVLDPLYEEFKLKLVVEGLKVPQETKPLSKETTPSFDDEAL 293
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 4e-08
Identities = 98/416 (23%), Positives = 165/416 (39%), Gaps = 47/416 (11%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
+ G++ + +DP G+ + + D+++++ V + RQ G E
Sbjct: 2 LVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPE 59
Query: 85 RR----GIMLKFADLIE--EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD 138
R + + A + E + A L A K + A G++ L +AG
Sbjct: 60 RYLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQAL-GEVVVTRKFLENFAGDQV 118
Query: 139 KIHGEVLKMSRALQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
+ + QG R P G V I P+NFP + +++ AL G ++K
Sbjct: 119 RFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVD 178
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
+ ++ F L L G+P ++++ GPT I + FTGS+ V ++
Sbjct: 179 SKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMN-KILLEANPRMTLFTGSSKVAERL- 236
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSRVY---- 310
A + K V LE G ++ DV DV+ A G+ C A S ++
Sbjct: 237 --ALELHGK-VKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHEN 293
Query: 311 -VQEGIYDEFEKKLVEKAKA--WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 367
VQ GI D+ K L E+ K +G P + + D++L+ GA
Sbjct: 294 WVQAGILDKL-KALAEQRKLEDLTIG----PVLTWTTERILDHVDKLLAI------PGAK 342
Query: 368 LLTGGKPI---GKKGYY--IEPTIFTNVTEDMLIAKN------EIFGPVMALMKFK 412
+L GGKP+ Y EPT E++ I +N E+FGP + ++K
Sbjct: 343 VLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYK 398
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 6e-07
Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 9/176 (5%)
Query: 155 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP----AEQTPLIALYFAHLAK 210
+ EPIGVV I P PT+ K +L ++I P + T A A
Sbjct: 91 IIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAV 150
Query: 211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL 270
AG P+ ++ + + I + TG G V++AA +S KP
Sbjct: 151 AAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATG----GPAVVKAAYSSG-KPAIGVG 205
Query: 271 GGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 326
G +P++I + D+ A + F+ G IC + V V + +YDE + +
Sbjct: 206 AGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEVMRLFEGQ 261
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 74/290 (25%), Positives = 119/290 (41%), Gaps = 35/290 (12%)
Query: 59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA 118
VD AV AA+ A + + + A+R I+ + + +AE LA + + G
Sbjct: 4 ATVDDAVAAAKAAQ--KQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETG------ 55
Query: 119 KMGDIPG--AANTLRYYAGAADKIHG-EVLKMSRALQG---YTLRE--PIGVVGHIIPWN 170
MG + A N L AA+K G E L + A G TL E P GV+G I P
Sbjct: 56 -MGRVEDKIAKNHL-----AAEKTPGTEDLTTT-AWSGDNGLTLVEYAPFGVIGAITPST 108
Query: 171 FPT-TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL----AKLAGVPDGVLNVVPGF 225
PT T+ +S LAAG ++ P ++ Y L AG PD ++ V
Sbjct: 109 NPTETIINNSIS-MLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEP 167
Query: 226 GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVN 285
+ +H DI+ + TG V + + + K G P+++ + D+
Sbjct: 168 TIETTNELMAHPDINLLVVTGGPAVVKAALSSG-----KKAIGAGAGNPPVVVDETADIE 222
Query: 286 TAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335
AA + G F+ C+A V + + D + ++ A+V+ D
Sbjct: 223 KAARDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAAM-QRNGAYVLNDE 271
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 1e-05
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 385 TIFTNVTEDMLIAKNEIFGPVMALMKFK 412
T+ +V DM IA+ EIFGPV+ +++FK
Sbjct: 257 TVLVDVDPDMPIAQEEIFGPVLPVIRFK 284
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 44.4 bits (106), Expect = 8e-05
Identities = 56/207 (27%), Positives = 84/207 (40%), Gaps = 35/207 (16%)
Query: 158 EPIGVVGHIIPWNFP--TTMFFMKVSPALAAGCTMIVKP---AEQTPLIALYFAH-LAKL 211
EP+GV+ +IP P T +F K AL +I P A++ + A A
Sbjct: 94 EPVGVIAALIPSTNPTSTAIF--KALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVA 151
Query: 212 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 271
AG P+G++ + + H D+D + TG M AA S+ KP +G
Sbjct: 152 AGAPEGLIQWIEEPSIELTQELMKHPDVDLILATGG-----PGMVKAAYSSGKPA---IG 203
Query: 272 ---GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF--------- 319
G P I + D+ A +L F+ G IC + V V + IYDE
Sbjct: 204 VGPGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDEIYDEVRAELKRRGA 263
Query: 320 ------EKKLVEKAKAWVVGDPFDPAV 340
EK+ +EKA + G +P +
Sbjct: 264 YFLNEEEKEKLEKA-LFDDGGTLNPDI 289
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
| >gnl|CDD|237956 PRK15398, PRK15398, aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 4e-04
Identities = 81/289 (28%), Positives = 123/289 (42%), Gaps = 39/289 (13%)
Query: 59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA 118
VD AV AA+ A + + S A R+ I+ + + HAE LA L + G
Sbjct: 36 ASVDDAVAAAKVAQQR--YQQKSLAMRQRIIDAIREALLPHAEELAELAVEETG------ 87
Query: 119 KMGDIPG--AANTLRYYAGAADKIHG-EVLKMSRAL---QGYTLRE--PIGVVGHIIPWN 170
MG + A N AA+K G E L AL G TL E P GV+G + P
Sbjct: 88 -MGRVEDKIAKNVA-----AAEKTPGVEDLTTE-ALTGDNGLTLIEYAPFGVIGAVTPST 140
Query: 171 FPT-TMFFMKVSPALAAGCTMIVKP---AEQTPL--IALYFAHLAKLAGVPDGVLNVVPG 224
PT T+ +S LAAG +++ P A++ L I L + G P+ ++ V
Sbjct: 141 NPTETIINNAIS-MLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAAGG-PENLVVTVAE 198
Query: 225 FGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDD-VD 283
+ H I + TG V + M+ S K + G +P ++ D+ D
Sbjct: 199 PTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIG--AGAGNPPVVVDETAD 252
Query: 284 VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332
+ AA + G F+ C+A V V + + DE +L+EK A ++
Sbjct: 253 IEKAARDIVKGASFDNNLPCIAEKEVIVVDSVADEL-MRLMEKNGAVLL 300
|
Length = 465 |
| >gnl|CDD|131570 TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.002
Identities = 36/173 (20%), Positives = 64/173 (36%), Gaps = 13/173 (7%)
Query: 158 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP----AEQTPLIALYFAHLAKLAG 213
P+GVV +IP PT+ K ++ A ++ P + A+ AG
Sbjct: 103 VPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAG 162
Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
P+G + + + + D + TG + M AA S+ P G
Sbjct: 163 APEGAIGCITVPTIEGTNELMKNKDTSLILATGG-----EAMVKAAYSSGTPAIGVGPGN 217
Query: 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ----EGIYDEFEKK 322
P I +V A + F+ G IC + + V+ + + +E +K+
Sbjct: 218 GPAYIERTANVKKAVRDIIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQ 270
|
Length = 488 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 414 | |||
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 99.89 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.78 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.7 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.63 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 98.36 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 97.6 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 96.57 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 92.75 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 90.57 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 85.92 |
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-92 Score=680.90 Aligned_cols=392 Identities=61% Similarity=0.974 Sum_probs=378.7
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 015020 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (414)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (414)
.++||||+|+++.++++++++||.||+++++|+.++.+|++.||++||+||+.+.|++++..+|..+|++++++++++++
T Consensus 21 ~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~ 100 (501)
T KOG2450|consen 21 LGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDAD 100 (501)
T ss_pred hheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhH
Confidence 47999999999999999999999999999999999999999999999999985569999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHh
Q 015020 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181 (414)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~ 181 (414)
.|+.+.+.+.|||..+++..++..+++.+|||+.|++...+...+.......|++++|+|||+.|.|||||+....|+++
T Consensus 101 ~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKla 180 (501)
T KOG2450|consen 101 VLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPTDGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLA 180 (501)
T ss_pred HHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCCCCceEEEecCCcceeeeEeccCchHHHHHHHhhh
Confidence 99999999999999999955999999999999999988877766666677899999999999999999999999999999
Q ss_pred hHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhC
Q 015020 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (414)
Q Consensus 182 ~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 261 (414)
|||++||+||+||++++|+++..++++++++|+|+|++|+|+|.|...+.+|.+|++|+.|+||||+.+|+.|++.++..
T Consensus 181 PALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~~ 260 (501)
T KOG2450|consen 181 PALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAES 260 (501)
T ss_pred hHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999867
Q ss_pred CCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhc-cccCCCCCCCC
Q 015020 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPFDPAV 340 (414)
Q Consensus 262 ~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~p~~~~~ 340 (414)
++||+++|||||+|.||++|||+|.|++.+..+.|+|+||.|++.+|+|||+++||+|+++++++..+ +++|||.++.+
T Consensus 261 n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~~ 340 (501)
T KOG2450|consen 261 NLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEGT 340 (501)
T ss_pred CCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCccc
Confidence 79999999999999999999999999999999999999999999999999999999999999999966 99999999999
Q ss_pred CccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
.+||.+++.|++|+.++|+.++++||++++||.+..+.|+|+.|||+.+++++|.|++||+||||+.|++|++
T Consensus 341 ~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t 413 (501)
T KOG2450|consen 341 EQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKT 413 (501)
T ss_pred ccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCc
Confidence 9999999999999999999999999999999988667899999999999999999999999999999999986
|
|
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-92 Score=646.97 Aligned_cols=389 Identities=39% Similarity=0.681 Sum_probs=374.2
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 015020 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (414)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (414)
..+.||+|+|+.+.++++|++.||++||+|+.|+..+.++.+.||+.|.++|. +|+.++..+|.++|+++.++|.+|+
T Consensus 23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~--s~~~~takeRs~lLrkwy~Li~en~ 100 (503)
T KOG2451|consen 23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFK--SYRNLTAKERSALLRKWYELIMENK 100 (503)
T ss_pred chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhch
Confidence 56789999999988889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHhhHHh
Q 015020 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (414)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (414)
++|++++++|.|||+.++.. |+..+..++++|++.++++.++..+. .+.....+.++|+||+++|+|||||.....++
T Consensus 101 ddLa~iiTlE~GKpL~eA~g-Ev~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK 179 (503)
T KOG2451|consen 101 DDLATIITLENGKPLGEAKG-EVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRK 179 (503)
T ss_pred HHHHHHHhhhcCCchhhccc-eeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhH
Confidence 99999999999999999996 99999999999999999998887764 35667789999999999999999999999999
Q ss_pred HhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC---chhHHHHhhhCCCcCEEEEecCHHHHHHHHH
Q 015020 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF---GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (414)
Q Consensus 180 l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~---~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (414)
..+||++||+||+||++++|++++.++++..+||+|+|++|+++++ ..+.++.|+.+|.|+.|+||||+.+|+.+++
T Consensus 180 ~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~ 259 (503)
T KOG2451|consen 180 AGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMA 259 (503)
T ss_pred HHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHH
Confidence 9999999999999999999999999999999999999999999973 5578999999999999999999999999999
Q ss_pred HHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCC
Q 015020 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (414)
Q Consensus 257 ~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~ 336 (414)
+.+ ..+|++++||||+.|+||++|||+|.|++.....+|.|+||.|.+.+|+|||+++||+|+.+|.++++++++||.+
T Consensus 260 qsa-stvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~ 338 (503)
T KOG2451|consen 260 QSA-STVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGL 338 (503)
T ss_pred hhh-hhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCC
Confidence 999 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++..||||+..+.+++.+++++|+++||++++||+... ..++|++||||.+|+++|-+..||+|||+.+|++|++
T Consensus 339 ~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdt 416 (503)
T KOG2451|consen 339 DPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDT 416 (503)
T ss_pred CCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCC
Confidence 9999999999999999999999999999999999999543 3459999999999999999999999999999999986
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-89 Score=687.76 Aligned_cols=388 Identities=37% Similarity=0.673 Sum_probs=366.7
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 015020 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (414)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (414)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|+++|+ .|+++|..+|.++|+++++.|+++++
T Consensus 11 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ 88 (482)
T PRK11241 11 QQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERANILRRWFNLMMEHQD 88 (482)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 3589999999766678899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHhhHHhH
Q 015020 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (414)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 180 (414)
+|++++++|+|||+.+++. |+..+++.+++++.++++..+...+. ..+...+++++|+|||++|+|||||+.+.++++
T Consensus 89 ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (482)
T PRK11241 89 DLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKA 167 (482)
T ss_pred HHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHH
Confidence 9999999999999999986 99999999999998887655443332 123456789999999999999999999999999
Q ss_pred hhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHh
Q 015020 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (414)
Q Consensus 181 ~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~ 260 (414)
++||++||+||+|||+.+|+++.++.+++.++|+|+|++|+++|++.++++.|++||+++.|+||||+.+|+.|++.++
T Consensus 168 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa- 246 (482)
T PRK11241 168 GPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCA- 246 (482)
T ss_pred HHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-
Confidence 9999999999999999999999999999999999999999999977778999999999999999999999999999998
Q ss_pred CCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCC
Q 015020 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (414)
Q Consensus 261 ~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~ 340 (414)
.+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++
T Consensus 247 ~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~ 326 (482)
T PRK11241 247 KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGV 326 (482)
T ss_pred hcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++|||+++.+++++.++|++|+++||++++||.....+|+|++||||.+++++|++++||+||||++|++|++
T Consensus 327 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~ 399 (482)
T PRK11241 327 TIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKD 399 (482)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCC
Confidence 9999999999999999999999999999999976433689999999999999999999999999999999986
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-88 Score=686.80 Aligned_cols=407 Identities=83% Similarity=1.276 Sum_probs=379.4
Q ss_pred CcccccccCCCCccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHH
Q 015020 7 NGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERR 86 (414)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~ 86 (414)
|---.+.++++.+...++||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++||+++.|+.++.++|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~ 85 (501)
T PLN02766 6 NCGGASGVKVPEIKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERG 85 (501)
T ss_pred CCCccccccCCCcccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHH
Confidence 33346788899888889999999998766788999999999999999999999999999999999973359999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEE
Q 015020 87 GIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHI 166 (414)
Q Consensus 87 ~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i 166 (414)
++|++++++|++++++|++++++|+|||..+++..|+..+++.+++++..+.+..+...+...+...++.++|+|||++|
T Consensus 86 ~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I 165 (501)
T PLN02766 86 RIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMSRQLQGYTLKEPIGVVGHI 165 (501)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEeccceEEEEE
Confidence 99999999999999999999999999999998745999999999999988776655433322334567889999999999
Q ss_pred cCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEec
Q 015020 167 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 246 (414)
Q Consensus 167 ~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftG 246 (414)
+|||||+.+.++++++||++||+||+|||+.+|.++.++.+++.++|+|+|++|+|+|++.+.+..|+.||+++.|+|||
T Consensus 166 ~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTG 245 (501)
T PLN02766 166 IPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTG 245 (501)
T ss_pred CCCCChHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999997778899999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHH
Q 015020 247 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 326 (414)
Q Consensus 247 s~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~ 326 (414)
|+.+|+.|++.++.++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++
T Consensus 246 S~~~G~~i~~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~ 325 (501)
T PLN02766 246 STEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEK 325 (501)
T ss_pred cHHHHHHHHHHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHH
Confidence 99999999998873488999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCccccccccccee
Q 015020 327 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 406 (414)
Q Consensus 327 ~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~ 406 (414)
++++++|+|.++++++|||+++++++++.++|++++++|+++++||......|+|++||||.+++++|++++||+||||+
T Consensus 326 ~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl 405 (501)
T PLN02766 326 AKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVM 405 (501)
T ss_pred HHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceE
Confidence 99999999999999999999999999999999999999999999997644468999999999999999999999999999
Q ss_pred eEEEEec
Q 015020 407 ALMKFKI 413 (414)
Q Consensus 407 ~v~~~~~ 413 (414)
+|++|++
T Consensus 406 ~v~~~~~ 412 (501)
T PLN02766 406 SLMKFKT 412 (501)
T ss_pred EEEEeCC
Confidence 9999986
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-88 Score=679.18 Aligned_cols=382 Identities=51% Similarity=0.851 Sum_probs=364.3
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 015020 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (414)
Q Consensus 23 ~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (414)
++||||+|+...+ +++++||+||+++++++.++.+|+++|+++|+.+|. .|++++..+|.++|++++++|++++++
T Consensus 2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~--~W~~~~~~eR~~iL~~~a~~l~~~~~e 77 (472)
T COG1012 2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE--AWSRLSAEERAAILRRIADLLEARAEE 77 (472)
T ss_pred CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 5799999998654 899999999999999999999999999999999998 899999999999999999999999999
Q ss_pred HHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhh
Q 015020 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (414)
Q Consensus 103 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ 182 (414)
|++++++|+|||+.+++. |+..+++.++|+++.+++..+...+...+...++.++|+|||++|+|||||+++.+++++|
T Consensus 78 la~~~~~e~Gk~i~ea~~-ei~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~ap 156 (472)
T COG1012 78 LAALITLETGKPISEARG-EIARAADFIRYYAEEARRLEGETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAP 156 (472)
T ss_pred HHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccCCCCCcceEEEeecceEEEEECCCCCHHHHHHhhHHH
Confidence 999999999999999997 8999999999999999877666544333678899999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCC
Q 015020 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262 (414)
Q Consensus 183 ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~ 262 (414)
||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|.+.+.++.|+.||+|+.|+||||+.+|+.|++.++ ++
T Consensus 157 ALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa-~~ 235 (472)
T COG1012 157 ALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAA-AN 235 (472)
T ss_pred HHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHh-hc
Confidence 99999999999999999999999999999999999999999977779999999999999999999999999999999 89
Q ss_pred CcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhc-cccCCCCCCCCC
Q 015020 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPFDPAVR 341 (414)
Q Consensus 263 ~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~p~~~~~~ 341 (414)
+||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|.++ ++ +++||+.|+.++
T Consensus 236 ~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~ 314 (472)
T COG1012 236 LKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTD 314 (472)
T ss_pred CCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999 65 899998899999
Q ss_pred ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+||++++++++++.++|++++++|++++.||... . |+|++|||+.+++++|++++||+||||++|++|++
T Consensus 315 ~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~-~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~ 384 (472)
T COG1012 315 LGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRP-G-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKD 384 (472)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcCC-C-CeEECCEEEecCCCCChhhhccccCCceEEEEeCC
Confidence 9999999999999999999999999999999843 3 99999999999999999999999999999999986
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-88 Score=687.16 Aligned_cols=388 Identities=35% Similarity=0.510 Sum_probs=365.9
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|++++..+|.++|++++++|+++
T Consensus 112 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~k~a~~L~~~ 189 (604)
T PLN02419 112 PRVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFP--LWRNTPITTRQRVMLKFQELIRKN 189 (604)
T ss_pred cccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 457789999999876667899999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHhhHH
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (414)
+++|++++++|+|||+.+++. |+..+++.+++++.++....+...+. ..+...+++++|+|||++|+|||||+...++
T Consensus 190 ~~ela~~~~~E~GKp~~ea~~-EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~ 268 (604)
T PLN02419 190 MDKLAMNITTEQGKTLKDSHG-DIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLW 268 (604)
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECCCccHHHHHHH
Confidence 999999999999999999986 99999999999999887665544332 2344578899999999999999999999999
Q ss_pred hHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHH
Q 015020 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (414)
Q Consensus 179 ~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (414)
++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++ +.++.|+.|++|+.|+||||+.+|+.|++.+
T Consensus 269 ~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~-~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~A 347 (604)
T PLN02419 269 MFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTN-DTVNAICDDEDIRAVSFVGSNTAGMHIYARA 347 (604)
T ss_pred HHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCCh-HHHHHHHhCCCCCEEEEeCChHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999964 6789999999999999999999999999999
Q ss_pred HhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCC
Q 015020 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (414)
Q Consensus 259 ~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~ 338 (414)
+ .+++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +|+|+++|+++++++++|+|.|+
T Consensus 348 a-~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~ 425 (604)
T PLN02419 348 A-AKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEP 425 (604)
T ss_pred h-ccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCC
Confidence 8 889999999999999999999999999999999999999999999999999999 89999999999999999999999
Q ss_pred CCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc----CCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI----GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++||||+++.+++++.++|++|+++||++++||... ...|+|++||||.+++++|++++||+||||++|++|++
T Consensus 426 ~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~ 504 (604)
T PLN02419 426 DADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANS 504 (604)
T ss_pred CCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCC
Confidence 9999999999999999999999999999999999752 13589999999999999999999999999999999985
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-86 Score=670.85 Aligned_cols=392 Identities=46% Similarity=0.836 Sum_probs=366.7
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 015020 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (414)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (414)
.++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||+++.|+.+|..+|.++|++++++|+++++
T Consensus 6 ~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 85 (486)
T cd07140 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQE 85 (486)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 46899999998766788999999999999999999999999999999999973359999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc----CCccceeeecCCceEEEEcCCchhHHhhH
Q 015020 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (414)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (414)
+|++++++|+|||..++...|+..+++.+++++.++++..+...+.. .+...++.++|+|||++|+|||||+...+
T Consensus 86 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~ 165 (486)
T cd07140 86 ELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLA 165 (486)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHH
Confidence 99999999999999999645999999999999998877655443321 12246789999999999999999999999
Q ss_pred HhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHH
Q 015020 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (414)
Q Consensus 178 ~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (414)
+++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus 166 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 245 (486)
T cd07140 166 WKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKS 245 (486)
T ss_pred HHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777889999999999999999999999999999
Q ss_pred HHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCC
Q 015020 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (414)
Q Consensus 258 ~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 337 (414)
++..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+
T Consensus 246 aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~ 325 (486)
T cd07140 246 CAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLD 325 (486)
T ss_pred HHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCC
Confidence 98338999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++++|||+++++++++.++|++|+++||++++||...+.+|+|++||||.+++++|++++||+||||++|++|++
T Consensus 326 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~ 401 (486)
T cd07140 326 RSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDD 401 (486)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCC
Confidence 9999999999999999999999999999999999976445689999999999999999999999999999999973
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-86 Score=674.28 Aligned_cols=394 Identities=58% Similarity=0.963 Sum_probs=369.6
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|+++|+++.|+.++..+|.++|+++++.|+++
T Consensus 56 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 135 (538)
T PLN02466 56 SYTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKH 135 (538)
T ss_pred ccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHh
Confidence 44578999999987677899999999999999999999999999999999999733599999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHh
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (414)
+++|++++++|+|||..+++..|+..+++.+++|+.+.++..+...+...+...++.++|+|||++|+|||||+.+.+++
T Consensus 136 ~~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~ 215 (538)
T PLN02466 136 NDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWK 215 (538)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceEEEEECCCchHHHHHHHH
Confidence 99999999999999999986459999999999999988776665444323345688999999999999999999999999
Q ss_pred HhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHH
Q 015020 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (414)
Q Consensus 180 l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (414)
+++||++||+||+|||+.+|.++.+++++|.++|+|+|++|+|+|++.+++..|+.||++|.|+||||+.+|+.|++.++
T Consensus 216 i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa 295 (538)
T PLN02466 216 VGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAA 295 (538)
T ss_pred HhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999977778999999999999999999999999999988
Q ss_pred hCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCC
Q 015020 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (414)
Q Consensus 260 ~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 339 (414)
..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++.++++|+|.+++
T Consensus 296 ~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~ 375 (538)
T PLN02466 296 KSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKG 375 (538)
T ss_pred hcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCC
Confidence 34899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 376 ~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d 449 (538)
T PLN02466 376 VEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKD 449 (538)
T ss_pred CCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCC
Confidence 99999999999999999999999999999999986545689999999999999999999999999999999985
|
|
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-86 Score=673.88 Aligned_cols=407 Identities=40% Similarity=0.676 Sum_probs=380.0
Q ss_pred CCCCCcccccccCCCCccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCH
Q 015020 3 GSLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82 (414)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~ 82 (414)
++|..+++..-|+.......++||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++||+ .|+.+|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~ 83 (498)
T PLN02278 6 SSMDAQSALVKLRNAGLLRTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP--SWSKLTA 83 (498)
T ss_pred hccccHHHHHHhhcCCCCcccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCH
Confidence 35556777777777766678899999999766678999999999999999999999999999999999999 8999999
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecCCc
Q 015020 83 AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIG 161 (414)
Q Consensus 83 ~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~G 161 (414)
.+|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++..++...+...+.. .+...++.++|+|
T Consensus 84 ~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~G 162 (498)
T PLN02278 84 SERSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAIG-EVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVG 162 (498)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeeccc
Confidence 99999999999999999999999999999999999986 999999999999998876655443322 2345678899999
Q ss_pred eEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCE
Q 015020 162 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDK 241 (414)
Q Consensus 162 vv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~ 241 (414)
||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|.++|.++|+|+|++++++|++.+.++.|+.||+++.
T Consensus 163 vV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~ 242 (498)
T PLN02278 163 VVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRK 242 (498)
T ss_pred EEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCE
Confidence 99999999999999999999999999999999999999999999999999999999999999977678899999999999
Q ss_pred EEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHH
Q 015020 242 VSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321 (414)
Q Consensus 242 v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~ 321 (414)
|+||||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|++
T Consensus 243 V~fTGS~~~G~~i~~~aa-~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~ 321 (498)
T PLN02278 243 ITFTGSTAVGKKLMAGAA-ATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAE 321 (498)
T ss_pred EEEECcHHHHHHHHHHHh-hcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHH
Confidence 999999999999999998 7899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCccccccc
Q 015020 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEI 401 (414)
Q Consensus 322 ~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~ 401 (414)
+|+++++++++|+|+++++++||++++.+++++.++|++++++|+++++||.....+|+|++||||.+++++|+++++|+
T Consensus 322 ~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~ 401 (498)
T PLN02278 322 AFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEV 401 (498)
T ss_pred HHHHHHHhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCC
Confidence 99999999999999999999999999999999999999999999999999976434689999999999999999999999
Q ss_pred ccceeeEEEEec
Q 015020 402 FGPVMALMKFKI 413 (414)
Q Consensus 402 fgPv~~v~~~~~ 413 (414)
||||++|++|++
T Consensus 402 FGPVl~v~~~~~ 413 (498)
T PLN02278 402 FGPVAPLTRFKT 413 (498)
T ss_pred cCCEEEEEeeCC
Confidence 999999999986
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-85 Score=664.04 Aligned_cols=387 Identities=37% Similarity=0.633 Sum_probs=362.4
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 015020 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (414)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (414)
.++||||+|+.+ ++.+++++||.||+++++++.++.+|++++++.|+++|+ .|+++|..+|.++|++++++|+++++
T Consensus 2 ~~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 78 (472)
T TIGR03374 2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFA--EWGQTTPKARAECLLKLADVIEENAQ 78 (472)
T ss_pred CCceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 367999999975 467899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHhhHHhH
Q 015020 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (414)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 180 (414)
+|++++++|+|||..+++..|+..+++.+++++..++...+...+. ..+...++.++|+|||++|+|||||+.+.++++
T Consensus 79 ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 158 (472)
T TIGR03374 79 VFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 158 (472)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHH
Confidence 9999999999999999864499999999999998776554432221 123457889999999999999999999999999
Q ss_pred hhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHh
Q 015020 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (414)
Q Consensus 181 ~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~ 260 (414)
++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|++.++++.|+.||+++.|+||||+.+|+.|++.++
T Consensus 159 ~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa- 236 (472)
T TIGR03374 159 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTA- 236 (472)
T ss_pred HHHHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh-
Confidence 99999999999999999999999999999885 9999999999977788999999999999999999999999999998
Q ss_pred CCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCC
Q 015020 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (414)
Q Consensus 261 ~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~ 340 (414)
++++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++
T Consensus 237 ~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~ 316 (472)
T TIGR03374 237 PSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDEST 316 (472)
T ss_pred hcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCHHHHHHHHHHHHHHHHcC-CEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 341 RQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~G-a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++|||+++.+++++.++|++++++| +++++||......|+|+.|||+.+++++|++++||+||||++|++|++
T Consensus 317 ~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~ 390 (472)
T TIGR03374 317 ELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDD 390 (472)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECC
Confidence 9999999999999999999999999 799999976444689999999999999999999999999999999986
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-85 Score=665.31 Aligned_cols=393 Identities=64% Similarity=1.041 Sum_probs=367.7
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 015020 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (414)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (414)
..++||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++||+.+.|+++|..+|.++|++++++|++++
T Consensus 3 ~~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (476)
T cd07142 3 HTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHA 82 (476)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhH
Confidence 34679999999766678899999999999999999999999999999999997334999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhH
Q 015020 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (414)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 180 (414)
++|++++++|+|||..+++..|+..+++.+++++.++++..+...+.......++.++|+|||++|+|||||+.+.++++
T Consensus 83 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i 162 (476)
T cd07142 83 DELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKV 162 (476)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeceeeEEEECCCccHHHHHHHHH
Confidence 99999999999999999864599999999999999887765554442223456789999999999999999999999999
Q ss_pred hhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHh
Q 015020 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (414)
Q Consensus 181 ~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~ 260 (414)
++||++||+||+|||+.+|+++..+++++.++|+|+|++++++|++.+.+..|+.||+++.|+||||+.+|+.|++.++.
T Consensus 163 ~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa~ 242 (476)
T cd07142 163 GPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAK 242 (476)
T ss_pred HHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999777789999999999999999999999999999882
Q ss_pred CCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCC
Q 015020 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (414)
Q Consensus 261 ~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~ 340 (414)
.+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.+++.++++|+|.++++
T Consensus 243 ~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 322 (476)
T cd07142 243 SNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGV 322 (476)
T ss_pred cCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 28999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++||++++.+++++.++|++++++|+++++||.....+|+|++||||.+++++|++++||+||||++|++|++
T Consensus 323 ~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~ 395 (476)
T cd07142 323 EQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKT 395 (476)
T ss_pred cCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCC
Confidence 9999999999999999999999999999999986545689999999999999999999999999999999986
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-85 Score=663.30 Aligned_cols=387 Identities=41% Similarity=0.701 Sum_probs=363.2
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCC-CCCCCHHHHHHHHHHHHHHHHHhHH
Q 015020 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-WPRFSGAERRGIMLKFADLIEEHAE 101 (414)
Q Consensus 23 ~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~-w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (414)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ . |+++|..+|.++|+++++.|+++++
T Consensus 1 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~~w~~~~~~~R~~~L~~~a~~l~~~~~ 78 (477)
T cd07113 1 GHFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFV--SAWAKTTPAERGRILLRLADLIEQHGE 78 (477)
T ss_pred CCeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhH--hhhccCCHHHHHHHHHHHHHHHHHCHH
Confidence 468999999876667899999999999999999999999999999999997 5 9999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc------CCccceeeecCCceEEEEcCCchhHHh
Q 015020 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS------RALQGYTLREPIGVVGHIIPWNFPTTM 175 (414)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (414)
+|++++++|+|||..+++..|+..+++.+++++.++....+...+.. .+...++.++|+|||++|+|||||+.+
T Consensus 79 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~ 158 (477)
T cd07113 79 ELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMI 158 (477)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHH
Confidence 99999999999999998744999999999999988876554433211 123567899999999999999999999
Q ss_pred hHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHH
Q 015020 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (414)
Q Consensus 176 ~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (414)
.++++++||++||+||+|||+.+|.++.++.+++.++|+|+|++|+++|++. .+..|+.||+++.|+||||+.+|+.|+
T Consensus 159 ~~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V~fTGS~~~G~~i~ 237 (477)
T cd07113 159 AVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKVSFTGSVATGKKIG 237 (477)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999775 899999999999999999999999999
Q ss_pred HHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCC
Q 015020 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (414)
Q Consensus 256 ~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 335 (414)
+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 238 ~~aa-~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 316 (477)
T cd07113 238 RQAA-SDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSP 316 (477)
T ss_pred HHHH-hhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9998 789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
.+++++||||+++.+++++.++|++|+++|+++++||....+.|+|++|||+.+++++|+++++|+||||++|++|++
T Consensus 317 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~ 394 (477)
T cd07113 317 MDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYED 394 (477)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCC
Confidence 999999999999999999999999999999999999976434689999999999999999999999999999999985
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-85 Score=664.14 Aligned_cols=391 Identities=45% Similarity=0.762 Sum_probs=367.7
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015020 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (414)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (414)
++..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|+++++ .|+.+|..+|.++|++++++|++
T Consensus 4 ~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~ 81 (488)
T PRK13252 4 QPLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQK--IWAAMTAMERSRILRRAVDILRE 81 (488)
T ss_pred CccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence 4567889999999776678999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHH
Q 015020 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (414)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (414)
++++|++++++|+|||..+++..|+..+++.+++++++++...+...+...+...+++++|+|||++|+|||||+.+.++
T Consensus 82 ~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~ 161 (488)
T PRK13252 82 RNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACW 161 (488)
T ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEEeeeeEEEEECCCchHHHHHHH
Confidence 99999999999999999999745999999999999998876655443322344568899999999999999999999999
Q ss_pred hHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHH
Q 015020 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (414)
Q Consensus 179 ~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (414)
++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++. .++.|+.||++|.|+||||+.+|+.|.+.+
T Consensus 162 ~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a 240 (488)
T PRK13252 162 KSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGVPTGKKVMAAA 240 (488)
T ss_pred HHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999765 899999999999999999999999999998
Q ss_pred HhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCC
Q 015020 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (414)
Q Consensus 259 ~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~ 338 (414)
+ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.++
T Consensus 241 a-~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 319 (488)
T PRK13252 241 A-ASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDP 319 (488)
T ss_pred h-hcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 8 789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++|||+++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 320 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~ 398 (488)
T PRK13252 320 ATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDD 398 (488)
T ss_pred CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCC
Confidence 99999999999999999999999999999999996432 3589999999999999999999999999999999985
|
|
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-85 Score=662.26 Aligned_cols=386 Identities=27% Similarity=0.486 Sum_probs=361.6
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
+..++||||+|+.+ +.+++++||.||+++++++.++.+|+++|+++|++||+ .|++++..+|.++|++++++|+++
T Consensus 19 ~~~~~~I~G~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~ 94 (508)
T PLN02315 19 RNLGCYVGGEWRAN--GPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAK--IWMQVPAPKRGEIVRQIGDALRAK 94 (508)
T ss_pred cccCceECCEEecC--CCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhH
Confidence 45788999999863 57899999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecCCceEEEEcCCchhHHhhHH
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (414)
+++|++++++|+|||+.+++. |+..+++.++|++..++...+...+.. .+...+..++|+|||++|+|||||+.++++
T Consensus 95 ~~~la~~~~~e~GK~~~~a~~-ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 173 (508)
T PLN02315 95 LDYLGRLVSLEMGKILAEGIG-EVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGW 173 (508)
T ss_pred HHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHHHH
Confidence 999999999999999999986 999999999999988876655433322 234457789999999999999999999999
Q ss_pred hHhhHhhcCCEEEEecCCCChHHHHH----HHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHH
Q 015020 179 KVSPALAAGCTMIVKPAEQTPLIALY----FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (414)
Q Consensus 179 ~l~~ALaaGN~vvlkps~~~~~~~~~----l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i 254 (414)
++++||++||+||+|||+.+|.++.. +.+++.++|+|+|++|+++| +.+.+..|+.||+++.|+||||+.+|+.|
T Consensus 174 ~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~fTGS~~~G~~v 252 (508)
T PLN02315 174 NACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLMV 252 (508)
T ss_pred HHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHH
Confidence 99999999999999999999999887 67888999999999999998 66789999999999999999999999999
Q ss_pred HHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCC
Q 015020 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334 (414)
Q Consensus 255 ~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~ 334 (414)
++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 253 ~~~aa-~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~ 331 (508)
T PLN02315 253 QQTVN-ARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGD 331 (508)
T ss_pred HHHHH-hcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCC
Confidence 99988 78899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 335 p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
|.++++++|||++..+++++.+++++++++||++++||...+..|+|++|||+ +++++|++++||+||||++|++|++
T Consensus 332 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~ 409 (508)
T PLN02315 332 PLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKT 409 (508)
T ss_pred CCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCC
Confidence 99999999999999999999999999999999999999864446899999999 6999999999999999999999985
|
|
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-84 Score=658.87 Aligned_cols=388 Identities=46% Similarity=0.784 Sum_probs=365.8
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhc-----ccCCCCCCCHHHHHHHHHHHHHHH
Q 015020 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAF-----DHGPWPRFSGAERRGIMLKFADLI 96 (414)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~-----~~~~w~~~~~~~R~~~L~~~a~~l 96 (414)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++|++.|++|| + .|+++|..+|.++|++++++|
T Consensus 8 ~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~--~W~~~~~~~R~~~L~~~a~~l 85 (503)
T PLN02467 8 RQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGK--DWARTTGAVRAKYLRAIAAKI 85 (503)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccc--hhhcCCHHHHHHHHHHHHHHH
Confidence 478999999987667889999999999999999999999999999999999 7 899999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCcee-ec--c-CCccceeeecCCceEEEEcCCchh
Q 015020 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KM--S-RALQGYTLREPIGVVGHIIPWNFP 172 (414)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~--~-~~~~~~~~~~P~Gvv~~i~p~n~P 172 (414)
++++++|++++++|+|||+.+++. |+..+++.+++++.+++++.+... +. . .+...+++++|+|||++|+|||||
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 164 (503)
T PLN02467 86 TERKSELAKLETLDCGKPLDEAAW-DMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYP 164 (503)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChH
Confidence 999999999999999999999986 999999999999998877654431 11 1 133568899999999999999999
Q ss_pred HHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHH
Q 015020 173 TTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252 (414)
Q Consensus 173 ~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~ 252 (414)
+.+.++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.++.|+.|++++.|+||||+.+|+
T Consensus 165 ~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~ 244 (503)
T PLN02467 165 LLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGR 244 (503)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999999999999999999997777899999999999999999999999
Q ss_pred HHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhcccc
Q 015020 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (414)
Q Consensus 253 ~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (414)
.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 245 ~v~~~aa-~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~ 323 (503)
T PLN02467 245 KIMTAAA-QMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKI 323 (503)
T ss_pred HHHHHHh-ccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCC
Confidence 9999998 889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCCeEeeEEEeeCCCCCcccccccccceeeEEE
Q 015020 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMK 410 (414)
Q Consensus 333 g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~ 410 (414)
|||.++++++|||+++.+++++.++|++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 324 g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~ 403 (503)
T PLN02467 324 SDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKT 403 (503)
T ss_pred CCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEe
Confidence 99999999999999999999999999999999999999997532 3589999999999999999999999999999999
Q ss_pred Eec
Q 015020 411 FKI 413 (414)
Q Consensus 411 ~~~ 413 (414)
|++
T Consensus 404 ~~~ 406 (503)
T PLN02467 404 FST 406 (503)
T ss_pred eCC
Confidence 985
|
|
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-84 Score=656.95 Aligned_cols=387 Identities=49% Similarity=0.812 Sum_probs=364.2
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 015020 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (414)
Q Consensus 23 ~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (414)
++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|+++|+ .|+.+|..+|.++|+++++.|++++++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (475)
T cd07117 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFK--TWRKTTVAERANILNKIADIIDENKEL 79 (475)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHH
Confidence 579999999876678899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhh
Q 015020 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (414)
Q Consensus 103 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ 182 (414)
|++++++|+|||+.+++..|+..+++.+++++.++....++..+...+...+++++|+|||++|+|||||+.+.++++++
T Consensus 80 la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~ 159 (475)
T cd07117 80 LAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAP 159 (475)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceeEEEEeecceEEEECCCccHHHHHHHHHHH
Confidence 99999999999999997459999999999999887665544333223345688999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCC
Q 015020 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262 (414)
Q Consensus 183 ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~ 262 (414)
||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|++.+.+..|+.|++++.|+||||+.+|+.|++.++ ++
T Consensus 160 AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa-~~ 237 (475)
T cd07117 160 ALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAA-KK 237 (475)
T ss_pred HHHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-cc
Confidence 999999999999999999999999999885 9999999999977788999999999999999999999999999998 89
Q ss_pred CcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCc
Q 015020 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQ 342 (414)
Q Consensus 263 ~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~ 342 (414)
++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++.++++|+|.++++++
T Consensus 238 ~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~ 317 (475)
T cd07117 238 LIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQM 317 (475)
T ss_pred CCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 343 GPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 343 gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
||++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 318 gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~ 392 (475)
T cd07117 318 GAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKT 392 (475)
T ss_pred cCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECC
Confidence 9999999999999999999999999999997642 3589999999999999999999999999999999986
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-84 Score=657.13 Aligned_cols=396 Identities=60% Similarity=0.956 Sum_probs=369.3
Q ss_pred CccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccC-CCCCCCHHHHHHHHHHHHHHH
Q 015020 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLI 96 (414)
Q Consensus 18 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~~L~~~a~~l 96 (414)
++...++||||+|+.+.++.+++++||+||+++++++.++.++++++++.|++||+.+ .|+++|..+|.++|+++++.|
T Consensus 3 ~~~~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l 82 (481)
T cd07141 3 EIKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLI 82 (481)
T ss_pred ccccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHH
Confidence 4556678999999987667899999999999999999999999999999999999731 599999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhh
Q 015020 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMF 176 (414)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 176 (414)
++++++|++++++|+|||..++...|+..+++.+++++.++++..+...+...+...+..++|+|||++|+|||||+...
T Consensus 83 ~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 162 (481)
T cd07141 83 ERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMA 162 (481)
T ss_pred HHhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEeceeEEEEEccChhHHHHH
Confidence 99999999999999999997664449999999999999988777665443223345678999999999999999999999
Q ss_pred HHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHH
Q 015020 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (414)
Q Consensus 177 ~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (414)
++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.+..|+.|+++|.|+||||+.+|+.|++
T Consensus 163 ~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~ 242 (481)
T cd07141 163 AWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQ 242 (481)
T ss_pred HHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977778899999999999999999999999999
Q ss_pred HHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCC
Q 015020 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (414)
Q Consensus 257 ~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~ 336 (414)
.++..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+
T Consensus 243 ~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~ 322 (481)
T cd07141 243 AAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPF 322 (481)
T ss_pred HhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 88823899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++++|||+++.+++++.++|++|+++|+++++||......|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 323 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 399 (481)
T cd07141 323 DPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKT 399 (481)
T ss_pred CCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCC
Confidence 99999999999999999999999999999999999987545689999999999999999999999999999999986
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-84 Score=656.32 Aligned_cols=387 Identities=49% Similarity=0.798 Sum_probs=365.6
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 015020 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (414)
Q Consensus 23 ~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (414)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++|+++
T Consensus 2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (480)
T cd07559 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFK--TWGKTSVAERANILNKIADRIEENLEL 79 (480)
T ss_pred CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999876778999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhh
Q 015020 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (414)
Q Consensus 103 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ 182 (414)
|++++++|+|||+.+++..|+..+++.+++++.++....+...+...+...++.++|+|||++|+|||||+.+.++++++
T Consensus 80 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ 159 (480)
T cd07559 80 LAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAP 159 (480)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 99999999999999997559999999999999888765544333233456788999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCC
Q 015020 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262 (414)
Q Consensus 183 ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~ 262 (414)
||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|++.++++.|+.||+++.|+||||+.+|+.|++.++ ++
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa-~~ 237 (480)
T cd07559 160 ALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAA-EN 237 (480)
T ss_pred HHHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-cc
Confidence 999999999999999999999999999996 9999999999977788999999999999999999999999999998 88
Q ss_pred CcceeeecCCCCceEEcCCC-----CHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCC
Q 015020 263 LKPVSLELGGKSPLLIFDDV-----DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (414)
Q Consensus 263 ~~~~~~elgG~~~~iV~~da-----dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 337 (414)
++|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|++
T Consensus 238 ~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~ 317 (480)
T cd07559 238 LIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLD 317 (480)
T ss_pred CCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++++|||+++.+++++.++|++|+++||++++||.... ..|+|++|||+.+++++|+++++|+||||++|++|++
T Consensus 318 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 397 (480)
T cd07559 318 PETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKD 397 (480)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCC
Confidence 999999999999999999999999999999999997642 3589999999999999999999999999999999986
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-84 Score=655.21 Aligned_cols=386 Identities=40% Similarity=0.699 Sum_probs=360.7
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCC-CCCCCHHHHHHHHHHHHHHHHHhHH
Q 015020 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-WPRFSGAERRGIMLKFADLIEEHAE 101 (414)
Q Consensus 23 ~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~-w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (414)
++||||+|+. ++.+++++||+||+++++++.++.++++++++.|++||+ . |+++|..+|.++|++++++|+++++
T Consensus 2 ~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~~w~~~~~~~R~~~L~~~a~~l~~~~~ 77 (481)
T TIGR03216 2 RNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALK--GPWGKMTVAERADLLYAVADEIERRFD 77 (481)
T ss_pred CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH--hhHhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 5799999986 457899999999999999999999999999999999998 7 9999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec----cCCccceeeecCCceEEEEcCCchhHHhhH
Q 015020 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM----SRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (414)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (414)
+|++++++|+|||..+++..|+..+++.+++++..++...+...+. ..+...++.++|+|||++|+|||||+.+.+
T Consensus 78 ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~ 157 (481)
T TIGR03216 78 DFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMT 157 (481)
T ss_pred HHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHH
Confidence 9999999999999999864589999999999998876654433221 112346788999999999999999999999
Q ss_pred HhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCch-hHHHHhhhCCCcCEEEEecCHHHHHHHHH
Q 015020 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (414)
Q Consensus 178 ~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~-~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (414)
+++++||++||+||+|||+.+|.++.++.++|.++|+|+|++|+++|.+. +.++.|..||++|.|+||||+.+|+.|++
T Consensus 158 ~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~ 237 (481)
T TIGR03216 158 WKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMK 237 (481)
T ss_pred HHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998654 47889999999999999999999999999
Q ss_pred HHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCC
Q 015020 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (414)
Q Consensus 257 ~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~ 336 (414)
.++ ++++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.
T Consensus 238 ~aa-~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~ 316 (481)
T TIGR03216 238 AAA-DGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPD 316 (481)
T ss_pred HHh-cCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 998 7899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-----CCCCeEeeEEEeeCCCCCcccccccccceeeEEEE
Q 015020 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411 (414)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~ 411 (414)
+++++|||++++.+++++.++|++|+++|+++++||.... .+|+|++||||.+++++|++++||+||||++|++|
T Consensus 317 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~ 396 (481)
T TIGR03216 317 DPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPF 396 (481)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEe
Confidence 9999999999999999999999999999999999997531 36899999999999999999999999999999999
Q ss_pred ec
Q 015020 412 KI 413 (414)
Q Consensus 412 ~~ 413 (414)
++
T Consensus 397 ~~ 398 (481)
T TIGR03216 397 DS 398 (481)
T ss_pred CC
Confidence 85
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-84 Score=658.93 Aligned_cols=387 Identities=29% Similarity=0.446 Sum_probs=360.7
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH-
Q 015020 21 FTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE- 98 (414)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~- 98 (414)
..++||||+|+.+ +.+++++||+| |+++++++.++.+|+++||+.|++||+ .|+++|..+|.++|++++++|++
T Consensus 32 ~~~~~i~G~~~~~--~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~ 107 (522)
T cd07123 32 EIPLVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARK--EWARMPFEDRAAIFLKAADLLSGK 107 (522)
T ss_pred ccCeeECCEEcCC--CCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhh
Confidence 4678999999863 56899999995 999999999999999999999999999 89999999999999999999996
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCC-ceEEEEcCCchhHHhh
Q 015020 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPI-GVVGHIIPWNFPTTMF 176 (414)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~-Gvv~~i~p~n~P~~~~ 176 (414)
++++|++++++|+|||+.++...|+...++.+++++.++.+..+...+. ..+...++.++|+ |||++|+|||||+...
T Consensus 108 ~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~ 187 (522)
T cd07123 108 YRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGG 187 (522)
T ss_pred CHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHHH
Confidence 8999999999999999999864478899999999998887665433222 2245578899998 9999999999999999
Q ss_pred HHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHH
Q 015020 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (414)
Q Consensus 177 ~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (414)
.+++++|| +||+||+|||+.+|+++..|+++|.++|+|+|++|+++|++.+++..|+.|++++.|+||||+.+|+.|++
T Consensus 188 ~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~ 266 (522)
T cd07123 188 NLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWK 266 (522)
T ss_pred HHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 69999999999999999999999999999999999999977778999999999999999999999999999
Q ss_pred HHHhCCCc------ceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhcc
Q 015020 257 AAATSNLK------PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 330 (414)
Q Consensus 257 ~~~~~~~~------~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~ 330 (414)
.++ .+++ ++++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++
T Consensus 267 ~aa-~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l 345 (522)
T cd07123 267 QIG-ENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEI 345 (522)
T ss_pred HHH-hhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhC
Confidence 998 6776 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHc-CCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEE
Q 015020 331 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE-GATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM 409 (414)
Q Consensus 331 ~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~ 409 (414)
++|+|.|+++++|||+++++++++.++|++++++ ||++++||......|+|++||||.+++++|++++||+||||++|+
T Consensus 346 ~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~ 425 (522)
T cd07123 346 KMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVY 425 (522)
T ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEE
Confidence 9999999999999999999999999999999999 999999997643458999999999999999999999999999999
Q ss_pred EEec
Q 015020 410 KFKI 413 (414)
Q Consensus 410 ~~~~ 413 (414)
+|++
T Consensus 426 ~~~~ 429 (522)
T cd07123 426 VYPD 429 (522)
T ss_pred EeCC
Confidence 9985
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-84 Score=658.47 Aligned_cols=390 Identities=28% Similarity=0.415 Sum_probs=362.9
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 015020 19 IKFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (414)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (414)
...+++||||+|+.+ ++.+++++||.| |+++++++.++.+|+++|+++|+++|+ .|+.+|..+|.++|++++++|+
T Consensus 29 ~~~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~--~W~~~~~~~R~~~L~k~a~~l~ 105 (533)
T TIGR01236 29 PIEIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKK--DWSALPFYDRAAIFLKAADLLS 105 (533)
T ss_pred CeeeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHH
Confidence 366789999999974 456899999997 899999999999999999999999999 9999999999999999999999
Q ss_pred -HhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCcee-eccCCccceeeecCC-ceEEEEcCCchhHH
Q 015020 98 -EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KMSRALQGYTLREPI-GVVGHIIPWNFPTT 174 (414)
Q Consensus 98 -~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~-Gvv~~i~p~n~P~~ 174 (414)
+++++|++++++|+||++.+++..++..+++.+++++.++++..+... ....+..+++.++|+ |||++|+|||||+.
T Consensus 106 ~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~ 185 (533)
T TIGR01236 106 GPYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAI 185 (533)
T ss_pred hhcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHH
Confidence 599999999999999999999862399999999999998876654432 122345678899999 99999999999999
Q ss_pred hhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHH
Q 015020 175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (414)
Q Consensus 175 ~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i 254 (414)
...+++++|| +||+||+|||+.+|+++..|.++|.++|+|+|++|+++|++.++++.|+.||+++.|+||||+.+|+.|
T Consensus 186 ~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i 264 (533)
T TIGR01236 186 AGNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHL 264 (533)
T ss_pred HHHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 9999999999 799999999999999999999999999999999999999777889999999999999999999999999
Q ss_pred HHHHHhCCCc------ceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHh
Q 015020 255 MQAAATSNLK------PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 328 (414)
Q Consensus 255 ~~~~~~~~~~------~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~ 328 (414)
++.++ ++++ ++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++
T Consensus 265 ~~~aa-~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 343 (533)
T TIGR01236 265 WKWVA-SNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELA 343 (533)
T ss_pred HHHHH-hhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHh
Confidence 99998 6776 4999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcC--CEEEeCCcccCCCCCeEeeEEEeeCCCCCccccccccccee
Q 015020 329 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG--ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 406 (414)
Q Consensus 329 ~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~G--a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~ 406 (414)
++++|+|.++++++||++++.+++++.++|++++++| +++++||......|+|++||||.+++++|++++||+||||+
T Consensus 344 ~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl 423 (533)
T TIGR01236 344 EVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVL 423 (533)
T ss_pred cCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeE
Confidence 9999999999999999999999999999999999987 79999997643468999999999999999999999999999
Q ss_pred eEEEEec
Q 015020 407 ALMKFKI 413 (414)
Q Consensus 407 ~v~~~~~ 413 (414)
+|++|++
T Consensus 424 ~v~~~~~ 430 (533)
T TIGR01236 424 TVYVYPD 430 (533)
T ss_pred EEEEeCC
Confidence 9999986
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-83 Score=652.12 Aligned_cols=391 Identities=58% Similarity=0.924 Sum_probs=365.3
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCC-CCCHHHHHHHHHHHHHHHHHhH
Q 015020 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP-RFSGAERRGIMLKFADLIEEHA 100 (414)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~-~~~~~~R~~~L~~~a~~l~~~~ 100 (414)
.++||||+|+.+.++..++++||+||+++++++.++.+|+++|+++|++||++ .|+ .+|..+|.++|+++++.|++++
T Consensus 7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~-~W~~~~~~~~R~~~L~~~a~~l~~~~ 85 (481)
T cd07143 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFET-DWGLKVSGSKRGRCLSKLADLMERNL 85 (481)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhh-hhcccCCHHHHHHHHHHHHHHHHHhH
Confidence 46899999998766778999999999999999999999999999999999971 399 9999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhH
Q 015020 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (414)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 180 (414)
++|++++++|+|||..++...|+..+++.+++++.++++..+...+...+...++.++|+|||++|+|||||+.+.++++
T Consensus 86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~ 165 (481)
T cd07143 86 DYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKI 165 (481)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEecceeEEEECCCcChHHHHHHHH
Confidence 99999999999999976543499999999999999987665543332234456789999999999999999999999999
Q ss_pred hhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHh
Q 015020 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (414)
Q Consensus 181 ~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~ 260 (414)
++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++|++.+.+..|+.||++|.|+||||+.+|+.|++.++.
T Consensus 166 ~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~ 245 (481)
T cd07143 166 APALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK 245 (481)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999777789999999999999999999999999998873
Q ss_pred CCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCC
Q 015020 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (414)
Q Consensus 261 ~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~ 340 (414)
.+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++
T Consensus 246 ~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 325 (481)
T cd07143 246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDT 325 (481)
T ss_pred hcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++||++++.+++++.++|++++.+|+++++||......|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 326 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 398 (481)
T cd07143 326 FQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKT 398 (481)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCC
Confidence 9999999999999999999999999999999987544689999999999999999999999999999999986
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-83 Score=654.18 Aligned_cols=386 Identities=45% Similarity=0.768 Sum_probs=363.0
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 015020 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (414)
Q Consensus 23 ~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (414)
++||||+|+.+.++.+++++||+||+++++++.++.++++++++.|++|++ .|+++|..+|.++|++++++|++++++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~ 79 (488)
T TIGR02299 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFK--RWAELKAAERKRYLHKIADLIEQHADE 79 (488)
T ss_pred CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999876678899999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhh-hcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHh
Q 015020 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK-IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181 (414)
Q Consensus 103 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~ 181 (414)
|++++++|+|||..+++. |+..+++.++++++.+++ ..+...+.. ....++.++|+|||++|+|||||+.+.+++++
T Consensus 80 l~~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 157 (488)
T TIGR02299 80 IAVLECLDCGQPLRQTRQ-QVIRAAENFRFFADKCEEAMDGRTYPVD-THLNYTVRVPVGPVGLITPWNAPFMLSTWKIA 157 (488)
T ss_pred HHHHHHHHcCCcHHHHHH-HHHHHHHHHHHHHHhHHHhcCCccccCC-CceEEEEEEecceEEEECCCccHHHHHHHHHH
Confidence 999999999999999985 999999999999987763 333333322 34567889999999999999999999999999
Q ss_pred hHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhC
Q 015020 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (414)
Q Consensus 182 ~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 261 (414)
+||++||+||+|||+.+|.++.++.++|.++|+|+|++|+++|++.+.++.|+.|+.++.|+||||+.+|+.|++.++ +
T Consensus 158 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa-~ 236 (488)
T TIGR02299 158 PALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGA-D 236 (488)
T ss_pred HHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHH-h
Confidence 999999999999999999999999999999999999999999977778899999999999999999999999999998 8
Q ss_pred CCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCC
Q 015020 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR 341 (414)
Q Consensus 262 ~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~ 341 (414)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++++
T Consensus 237 ~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~ 316 (488)
T TIGR02299 237 TLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETE 316 (488)
T ss_pred cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-------CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-------KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-------~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+||++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 317 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~ 395 (488)
T TIGR02299 317 VGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKD 395 (488)
T ss_pred CCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCC
Confidence 99999999999999999999999999999997532 2489999999999999999999999999999999986
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-83 Score=650.79 Aligned_cols=386 Identities=38% Similarity=0.576 Sum_probs=362.9
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 015020 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (414)
Q Consensus 23 ~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (414)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++ .|+.+|..+|.++|++++++|++++++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 79 (478)
T cd07085 2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFP--AWSATPVLKRQQVMFKFRQLLEENLDE 79 (478)
T ss_pred CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999876667899999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHhhHHhHh
Q 015020 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181 (414)
Q Consensus 103 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~ 181 (414)
|++++++|+|||..+++. |+..+++.+++++...+...++..+. ..+...+..++|+|||++|+|||||+.+.+++++
T Consensus 80 l~~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~ 158 (478)
T cd07085 80 LARLITLEHGKTLADARG-DVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFP 158 (478)
T ss_pred HHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHH
Confidence 999999999999999986 99999999999988766555544332 2344578999999999999999999999999999
Q ss_pred hHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhC
Q 015020 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (414)
Q Consensus 182 ~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 261 (414)
+||++||+||+|||+.+|+++..+.++|.++|+|+|++++++|+ .+.+..|++||+++.|+||||+.+|+.|++.++ +
T Consensus 159 ~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa-~ 236 (478)
T cd07085 159 MAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHGG-KEAVNALLDHPDIKAVSFVGSTPVGEYIYERAA-A 236 (478)
T ss_pred HHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEecC-HHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh-h
Confidence 99999999999999999999999999999999999999999984 568899999999999999999999999999988 7
Q ss_pred CCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCC
Q 015020 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR 341 (414)
Q Consensus 262 ~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~ 341 (414)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++++
T Consensus 237 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~ 316 (478)
T cd07085 237 NGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGAD 316 (478)
T ss_pred cCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+||++++.+++++.++|++++++||++++||.... .+|+|++|||+.+++++|+++++|+||||++|++|++
T Consensus 317 ~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 392 (478)
T cd07085 317 MGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDT 392 (478)
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCC
Confidence 99999999999999999999999999999997521 3589999999999999999999999999999999986
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-83 Score=649.19 Aligned_cols=390 Identities=61% Similarity=0.987 Sum_probs=366.0
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCC--CCCCCHHHHHHHHHHHHHHHHHh
Q 015020 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP--WPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~--w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
.++||||+|+.+.++..++++||+||+++++++.++.++++++++.|++||+ . |+.+|..+|.++|+++++.|.++
T Consensus 4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~~~w~~~~~~~R~~~L~~~a~~l~~~ 81 (476)
T cd07091 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFE--TGWWRKMDPRERGRLLNKLADLIERD 81 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcc--cCccccCCHHHHHHHHHHHHHHHHHh
Confidence 4689999999766678899999999999999999999999999999999998 6 55999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHh
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (414)
+++|++++++|+|||..++...|+..+++.+++++.++++..+...+...+...++.++|+|||++|+|||||+...+++
T Consensus 82 ~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 161 (476)
T cd07091 82 RDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWK 161 (476)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeceeEEEEECCCcCHHHHHHHH
Confidence 99999999999999997665459999999999999888766555444334556788999999999999999999999999
Q ss_pred HhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHH
Q 015020 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (414)
Q Consensus 180 l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (414)
+++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++|++.+.++.|..|+++|.|+||||+.+|+.|++.++
T Consensus 162 ~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa 241 (476)
T cd07091 162 LAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAA 241 (476)
T ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999977778999999999999999999999999999988
Q ss_pred hCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCC
Q 015020 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (414)
Q Consensus 260 ~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 339 (414)
..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.+++
T Consensus 242 ~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~ 321 (476)
T cd07091 242 KSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPD 321 (476)
T ss_pred hcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCC
Confidence 33899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++||++++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 322 ~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~ 395 (476)
T cd07091 322 TFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKT 395 (476)
T ss_pred CcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCC
Confidence 99999999999999999999999999999999987545789999999999999999999999999999999986
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-83 Score=650.35 Aligned_cols=387 Identities=47% Similarity=0.796 Sum_probs=364.3
Q ss_pred eEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 015020 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLA 104 (414)
Q Consensus 25 ~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 104 (414)
||||+|+.+.++.+++++||+||+++++++.++.++++++++.|+++|+++.|+++|..+|.++|+++++.|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 80 (482)
T cd07119 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA 80 (482)
T ss_pred CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 68999987656788999999999999999999999999999999999973359999999999999999999999999999
Q ss_pred HHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHh
Q 015020 105 VLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPAL 184 (414)
Q Consensus 105 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL 184 (414)
+++++|+|||..+++. |+..+++.+++++.+.++..+...+...+...+++++|+|||++|+|||||+.+.++++++||
T Consensus 81 ~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL 159 (482)
T cd07119 81 RLETLNTGKTLRESEI-DIDDVANCFRYYAGLATKETGEVYDVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL 159 (482)
T ss_pred HHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHH
Confidence 9999999999999986 999999999999998876554443333445678999999999999999999999999999999
Q ss_pred hcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCc
Q 015020 185 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 264 (414)
Q Consensus 185 aaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~ 264 (414)
++||+||+|||+.+|.++.++.++|.++|+|+|++++++|++.+.+..|+.||+++.|+||||+.+|+.|++.++ .+++
T Consensus 160 aaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa-~~~~ 238 (482)
T cd07119 160 AAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAA-GNVK 238 (482)
T ss_pred hcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcCC
Confidence 999999999999999999999999999999999999999977678999999999999999999999999999998 7899
Q ss_pred ceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccc
Q 015020 265 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGP 344 (414)
Q Consensus 265 ~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gp 344 (414)
|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.++++++||
T Consensus 239 ~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gp 318 (482)
T cd07119 239 KVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGP 318 (482)
T ss_pred cEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 345 QVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 345 l~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|+++++|+||||++|++|++
T Consensus 319 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~ 391 (482)
T cd07119 319 LVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDT 391 (482)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCC
Confidence 99999999999999999999999999997532 2589999999999999999999999999999999985
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-83 Score=648.32 Aligned_cols=386 Identities=43% Similarity=0.695 Sum_probs=362.7
Q ss_pred cceeEcCeEeeCCCCCeEEeecCC-CCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 015020 22 TKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (414)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (414)
+++||||+|+.+. ..++++||+ ||+++++++.++.+|++++++.|++||+ .|++++..+|.++|+++++.|++++
T Consensus 1 ~~~~i~g~~~~~~--~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~ 76 (473)
T cd07097 1 YRNYIDGEWVAGG--DGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFP--AWRRTSPEARADILDKAGDELEARK 76 (473)
T ss_pred CCceECCEEecCC--CCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 3579999998753 347999999 5999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHhhHHh
Q 015020 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (414)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (414)
++|++++++|+|||+.+++. |+..+++.+++|+....+..+...+. ..+...++.++|+|||++|+|||||+.+.+++
T Consensus 77 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~ 155 (473)
T cd07097 77 EELARLLTREEGKTLPEARG-EVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWK 155 (473)
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHH
Confidence 99999999999999999986 99999999999998877665443322 23455789999999999999999999999999
Q ss_pred HhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHH
Q 015020 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (414)
Q Consensus 180 l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (414)
+++||++||+||+|||+.+|.++.++.+++.++|+|+|++|+++|++.+++..|+.|++++.|+||||+.+|+.|++.++
T Consensus 156 i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa 235 (473)
T cd07097 156 IAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAA 235 (473)
T ss_pred HHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999977778999999999999999999999999999998
Q ss_pred hCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCC
Q 015020 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (414)
Q Consensus 260 ~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 339 (414)
++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++
T Consensus 236 -~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 314 (473)
T cd07097 236 -ARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEG 314 (473)
T ss_pred -ccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++|||+++.+++++.++|++|+++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 315 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 390 (473)
T cd07097 315 VDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRD 390 (473)
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCC
Confidence 9999999999999999999999999999999997542 3589999999999999999999999999999999986
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-82 Score=646.05 Aligned_cols=385 Identities=31% Similarity=0.470 Sum_probs=357.7
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 015020 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (414)
Q Consensus 23 ~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (414)
++||||+|+.+ ++.+++++||+||+++++++.++.++++++++.|++||+ .|+++|..+|.++|++++++|++++++
T Consensus 2 ~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 78 (487)
T PRK09457 2 TLWINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFP--AWARLSFEERQAIVERFAALLEENKEE 78 (487)
T ss_pred CceECCEEecC-CCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHhHHHH
Confidence 37999999875 356899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhh
Q 015020 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (414)
Q Consensus 103 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ 182 (414)
|++++++|+|||..+++. |+..+++.+++++.+.....+.......+...+++++|+|||++|+|||||+...++++++
T Consensus 79 la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 157 (487)
T PRK09457 79 LAEVIARETGKPLWEAAT-EVTAMINKIAISIQAYHERTGEKRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVP 157 (487)
T ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHH
Confidence 999999999999999986 9999999999988876554443332223445688999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCC
Q 015020 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262 (414)
Q Consensus 183 ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~ 262 (414)
||++||+||+|||+.+|.++.++++++.++|+|+|++++++| +.+.+..|+.||+++.|+||||+.+|+.|++.++...
T Consensus 158 ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 236 (487)
T PRK09457 158 ALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQP 236 (487)
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999999 5678999999999999999999999999999877344
Q ss_pred CcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchH-HHHHHHHHHHHhccccCCCC-CCCC
Q 015020 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFEKKLVEKAKAWVVGDPF-DPAV 340 (414)
Q Consensus 263 ~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p~-~~~~ 340 (414)
.+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++ |+|+++|+++++++++|+|+ ++.+
T Consensus 237 ~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~ 316 (487)
T PRK09457 237 EKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQP 316 (487)
T ss_pred CCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCC
Confidence 678999999999999999999999999999999999999999999999999998 99999999999999999996 7889
Q ss_pred CccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++|||+++.+++++.++|++++++|+++++||...+.+|+|++|||+ +++++|++++||+||||++|++|++
T Consensus 317 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~ 388 (487)
T PRK09457 317 FMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDD 388 (487)
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCC
Confidence 99999999999999999999999999999998654446899999999 7999999999999999999999985
|
|
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-83 Score=650.45 Aligned_cols=389 Identities=38% Similarity=0.609 Sum_probs=366.0
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 015020 19 IKFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (414)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (414)
.+.+++||||+|+.+ +.+++++||+| |+++++++.++.++++++++.|++||+ .|+.+|..+|.++|+++++.|+
T Consensus 30 ~~~~~~~i~g~~~~~--~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~ 105 (512)
T cd07124 30 GREYPLVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFP--TWRRTPPEERARLLLRAAALLR 105 (512)
T ss_pred ccccceeECCEEecC--CCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence 355789999999963 56899999998 999999999999999999999999999 9999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhH
Q 015020 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (414)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (414)
+++++|++++++|+|||..+++. |+..+++.+++++..+++..+...+...+...+++++|+|||++|+|||||+.+.+
T Consensus 106 ~~~~~la~~~~~e~Gk~~~ea~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~ 184 (512)
T cd07124 106 RRRFELAAWMVLEVGKNWAEADA-DVAEAIDFLEYYAREMLRLRGFPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILA 184 (512)
T ss_pred HCHHHHHHHHHHHcCcCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecceEEEEECCCChHHHHHH
Confidence 99999999999999999999986 99999999999999887765544433344567899999999999999999999999
Q ss_pred HhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHH
Q 015020 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (414)
Q Consensus 178 ~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (414)
+++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.+.+..|+.||+++.|+||||+.+|+.|++.
T Consensus 185 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~ 264 (512)
T cd07124 185 GMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYER 264 (512)
T ss_pred HHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877889999999999999999999999999999
Q ss_pred HHhC-----CCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhcccc
Q 015020 258 AATS-----NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (414)
Q Consensus 258 ~~~~-----~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (414)
++.. +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++
T Consensus 265 aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~ 344 (512)
T cd07124 265 AAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKV 344 (512)
T ss_pred HhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCC
Confidence 8832 68999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC--CCCeEeeEEEeeCCCCCcccccccccceeeEEE
Q 015020 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK--KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMK 410 (414)
Q Consensus 333 g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~ 410 (414)
|+|.|+++++||++++.+++++.++|+++++ |+++++||..... +|+|++|||+.+++++|++++||+||||++|++
T Consensus 345 g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~ 423 (512)
T cd07124 345 GDPEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIK 423 (512)
T ss_pred CCCCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEe
Confidence 9999999999999999999999999999988 8999999986532 689999999999999999999999999999999
Q ss_pred Eec
Q 015020 411 FKI 413 (414)
Q Consensus 411 ~~~ 413 (414)
|++
T Consensus 424 ~~~ 426 (512)
T cd07124 424 AKD 426 (512)
T ss_pred cCC
Confidence 986
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-82 Score=645.79 Aligned_cols=384 Identities=35% Similarity=0.583 Sum_probs=362.0
Q ss_pred eeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 015020 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL 103 (414)
Q Consensus 24 ~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 103 (414)
+||||+|+.+. +..++++||+||+++++++.++.+++++++++|++|++ .|+++|..+|.++|++++++|++++++|
T Consensus 1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 77 (478)
T cd07086 1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFK--EWRKVPAPRRGEIVRQIGEALRKKKEAL 77 (478)
T ss_pred CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 48999999765 67899999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecCCceEEEEcCCchhHHhhHHhHhh
Q 015020 104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (414)
Q Consensus 104 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ 182 (414)
++++++|+|||..+++. |+..+++.+++++..++...+...+.. .+...++.++|+|||++|+|||||+...++++++
T Consensus 78 a~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ 156 (478)
T cd07086 78 GRLVSLEMGKILPEGLG-EVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAI 156 (478)
T ss_pred HHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHH
Confidence 99999999999999986 999999999999988877655433321 2345678999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHH
Q 015020 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (414)
Q Consensus 183 ALaaGN~vvlkps~~~~~~~~~l~~~l~~a----glP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (414)
||++||+||+|||+.+|.++..++++|.++ |+|+|++++++|++. ++..|..||++|.|+||||+.+|+.|++.+
T Consensus 157 ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~fTGs~~~g~~i~~~a 235 (478)
T cd07086 157 ALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETV 235 (478)
T ss_pred HHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 999999999999999999999999999999 999999999999664 889999999999999999999999999999
Q ss_pred HhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCC
Q 015020 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (414)
Q Consensus 259 ~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~ 338 (414)
+ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++
T Consensus 236 a-~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 314 (478)
T cd07086 236 A-RRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDE 314 (478)
T ss_pred h-ccCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCC
Confidence 8 789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC--CCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK--KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++||++++.+++++.++|++|+++|+++++||..... +|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 315 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~ 391 (478)
T cd07086 315 GTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDS 391 (478)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCC
Confidence 999999999999999999999999999999999976432 589999999999999999999999999999999985
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-82 Score=645.46 Aligned_cols=387 Identities=41% Similarity=0.674 Sum_probs=363.3
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 015020 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (414)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (414)
.++||||+|+.+ ++++++++||+||+++++++.++.++++++++.|+++|+ .|++++..+|.++|+++++.|+++++
T Consensus 3 ~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 79 (475)
T PRK13473 3 TKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFP--EWSQTTPKERAEALLKLADAIEENAD 79 (475)
T ss_pred ccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 357999999875 567899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHhhHHhH
Q 015020 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (414)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 180 (414)
+|++++++|+|||..+++..|+..+++.+++++..++.+.+...+. ..+...+++++|+|||++|+|||||+...++++
T Consensus 80 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i 159 (475)
T PRK13473 80 EFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKL 159 (475)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHH
Confidence 9999999999999998864489999999999998877665432221 123356789999999999999999999999999
Q ss_pred hhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHh
Q 015020 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (414)
Q Consensus 181 ~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~ 260 (414)
++||++||+||+|||+.+|+++..+.+++.++ +|+|++|+++|++.+.+..|+.|+++|.|+||||+++|+.|++.++
T Consensus 160 ~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa- 237 (475)
T PRK13473 160 APALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAA- 237 (475)
T ss_pred HHHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-
Confidence 99999999999999999999999999999999 9999999999977788999999999999999999999999999998
Q ss_pred CCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCC
Q 015020 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (414)
Q Consensus 261 ~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~ 340 (414)
.+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++
T Consensus 238 ~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~ 317 (475)
T PRK13473 238 DSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDT 317 (475)
T ss_pred hcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCHHHHHHHHHHHHHHHHcC-CEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 341 RQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~G-a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++|||+++.+++++.++|++++++| +++++||......|+|++|||+.++++++++++||+||||++|++|++
T Consensus 318 ~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 391 (475)
T PRK13473 318 ELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDD 391 (475)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCC
Confidence 9999999999999999999999999 999999986534689999999999999999999999999999999975
|
|
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-82 Score=646.04 Aligned_cols=390 Identities=54% Similarity=0.908 Sum_probs=364.6
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCC-CCCCCHHHHHHHHHHHHHHHHHh
Q 015020 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-WPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~-w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
..++||||+|+.+.++.+++++||+||+++++++.++.++++++++.|++|++ . |+.+|..+|.++|+++++.|+++
T Consensus 7 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~--~~w~~~~~~~R~~iL~~~a~~l~~~ 84 (484)
T cd07144 7 PTGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFE--SWWSKVTGEERGELLDKLADLVEKN 84 (484)
T ss_pred CcCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hhHhcCCHHHHHHHHHHHHHHHHHh
Confidence 35689999999865667899999999999999999999999999999999998 6 88999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHh
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (414)
+++|++++++|+|||..++...|+..+++.+++++.++++..+...+...+...+..++|+|||++|+|||||+.+.+++
T Consensus 85 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~ 164 (484)
T cd07144 85 RDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWK 164 (484)
T ss_pred HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEecceEEEEECcCCCHHHHHHHH
Confidence 99999999999999987753349999999999999988777554443333445688999999999999999999999999
Q ss_pred HhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHH
Q 015020 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (414)
Q Consensus 180 l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (414)
+++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++|++.+.++.|+.||+++.|+||||+.+|+.|++.++
T Consensus 165 ~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~ 244 (484)
T cd07144 165 LAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAA 244 (484)
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999977778999999999999999999999999999988
Q ss_pred hCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhc-cccCCCCCC
Q 015020 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPFDP 338 (414)
Q Consensus 260 ~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~p~~~ 338 (414)
.+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +++|+|.++
T Consensus 245 -~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~ 323 (484)
T cd07144 245 -QNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDD 323 (484)
T ss_pred -hcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCC
Confidence 789999999999999999999999999999999999999999999999999999999999999999985 899999999
Q ss_pred CCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 324 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~ 401 (484)
T cd07144 324 DTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKT 401 (484)
T ss_pred CCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCC
Confidence 99999999999999999999999999999999997642 3589999999999999999999999999999999985
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-82 Score=643.33 Aligned_cols=381 Identities=31% Similarity=0.536 Sum_probs=354.9
Q ss_pred eEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 015020 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLA 104 (414)
Q Consensus 25 ~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 104 (414)
||||+|+.+ +.+++++||+||+++++++.++.++++++++.|++||+ .|+++|..+|.++|+++++.|++++++|+
T Consensus 2 ~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la 77 (474)
T cd07130 2 VYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFK--EWRDVPAPKRGEIVRQIGDALRKKKEALG 77 (474)
T ss_pred eECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999974 47899999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhH
Q 015020 105 VLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183 (414)
Q Consensus 105 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~A 183 (414)
+++++|+|||..+++. |+..+++.+++++...+.+.+...+. ..+...++.++|+|||++|+|||||+.+.++++++|
T Consensus 78 ~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 156 (474)
T cd07130 78 KLVSLEMGKILPEGLG-EVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIA 156 (474)
T ss_pred HHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHH
Confidence 9999999999999986 99999999999988776554443332 134456788999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCChHHHHHHHHH----HHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHH
Q 015020 184 LAAGCTMIVKPAEQTPLIALYFAHL----AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (414)
Q Consensus 184 LaaGN~vvlkps~~~~~~~~~l~~~----l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (414)
|++||+||+|||+.+|.++.+++++ |.++|+|+|++|+++|+ .+.+..|++|+++|.|+||||+.+|+.|++.++
T Consensus 157 LaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~-~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa 235 (474)
T cd07130 157 LVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGG-ADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVA 235 (474)
T ss_pred HHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhHHHHHhcCCCCCEEEEECchHHHHHHHHHHH
Confidence 9999999999999999999887766 46999999999999995 457999999999999999999999999999988
Q ss_pred hCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCC
Q 015020 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (414)
Q Consensus 260 ~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 339 (414)
++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.+++
T Consensus 236 -~~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~ 314 (474)
T cd07130 236 -ARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDG 314 (474)
T ss_pred -hcCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCC
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++|||+++.+++++.++|++|+++|+++++||......|+|++||||.++++ |++++||+||||++|++|++
T Consensus 315 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~ 387 (474)
T cd07130 315 TLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDT 387 (474)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCC
Confidence 99999999999999999999999999999999986444689999999988766 99999999999999999985
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-82 Score=643.85 Aligned_cols=386 Identities=46% Similarity=0.775 Sum_probs=363.2
Q ss_pred eEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 015020 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLA 104 (414)
Q Consensus 25 ~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 104 (414)
||||+|+.+.++++++++||+||+++++++.++.+++++++++|++|++ .|+.+|..+|.++|+++++.|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la 78 (467)
T TIGR01804 1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQG--EWASMTPEERGRILRRIAELIRERNEELA 78 (467)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6999999766678999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHh
Q 015020 105 VLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPAL 184 (414)
Q Consensus 105 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL 184 (414)
+++++|+|||..++...|+..+++.+++++..+++..+...+.......+..++|+|||++|+|||||+...++++++||
T Consensus 79 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL 158 (467)
T TIGR01804 79 KLETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPAL 158 (467)
T ss_pred HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHH
Confidence 99999999999999434999999999999998877655433322224567899999999999999999999999999999
Q ss_pred hcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCc
Q 015020 185 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 264 (414)
Q Consensus 185 aaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~ 264 (414)
++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++.+.++.|+.|++++.|+||||+.+|+.|++.++ .++|
T Consensus 159 aaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~-~~l~ 237 (467)
T TIGR01804 159 AAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAA-DHLK 237 (467)
T ss_pred hcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcCC
Confidence 999999999999999999999999999999999999999976788999999999999999999999999999998 7899
Q ss_pred ceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccc
Q 015020 265 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGP 344 (414)
Q Consensus 265 ~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gp 344 (414)
|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||
T Consensus 238 ~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp 317 (467)
T TIGR01804 238 HVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGP 317 (467)
T ss_pred cEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 345 QVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 345 l~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++.+++++.++|++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 318 li~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 390 (467)
T TIGR01804 318 LISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSS 390 (467)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCC
Confidence 99999999999999999999999999997532 2589999999999999999999999999999999986
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-82 Score=644.33 Aligned_cols=385 Identities=43% Similarity=0.693 Sum_probs=358.9
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 015020 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (414)
Q Consensus 23 ~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (414)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++++++
T Consensus 2 ~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (479)
T cd07116 2 DNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKE--AWGKTSVAERANILNKIADRMEANLEM 79 (479)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999876778999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhh
Q 015020 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (414)
Q Consensus 103 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ 182 (414)
|++++++|+|||+.+++..|+..+++.+++++.......+...+...+...++.++|+|||++|+|||||+.+.++++++
T Consensus 80 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (479)
T cd07116 80 LAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAP 159 (479)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecCCCCceEEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 99999999999999987449999999999999887665444333223345678999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCC
Q 015020 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262 (414)
Q Consensus 183 ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~ 262 (414)
||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|.+.+.+..|+.||+++.|+||||+.+|+.|++.++ .+
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa-~~ 237 (479)
T cd07116 160 ALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYAS-EN 237 (479)
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHH-cC
Confidence 999999999999999999999999999998 9999999999977778999999999999999999999999999998 78
Q ss_pred CcceeeecCCCCceEEcCC------CCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCC
Q 015020 263 LKPVSLELGGKSPLLIFDD------VDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (414)
Q Consensus 263 ~~~~~~elgG~~~~iV~~d------adl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~ 336 (414)
++|+++|+|||||+||++| ||++.|++.++++. +|+||.|++++|||||++++|+|+++|.++++++++|+|.
T Consensus 238 ~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~ 316 (479)
T cd07116 238 IIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPL 316 (479)
T ss_pred CCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999988 79999999999865 5899999999999999999999999999999999999999
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEe
Q 015020 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (414)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (414)
++++++||++++++++++.++|++++++||++++||.... ..|+|+.|||+.+++ +|++++||+||||++|++|+
T Consensus 317 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~ 395 (479)
T cd07116 317 DTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFK 395 (479)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeC
Confidence 9999999999999999999999999999999999997532 258999999999874 99999999999999999998
Q ss_pred c
Q 015020 413 I 413 (414)
Q Consensus 413 ~ 413 (414)
+
T Consensus 396 ~ 396 (479)
T cd07116 396 D 396 (479)
T ss_pred C
Confidence 6
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-82 Score=642.10 Aligned_cols=390 Identities=45% Similarity=0.773 Sum_probs=364.6
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 015020 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (414)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (414)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+++.|+.+|..+|.++|+++++.|+++++
T Consensus 20 ~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 99 (494)
T PRK09847 20 NRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAE 99 (494)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 46899999998766788999999999999999999999999999999999973359999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHh
Q 015020 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181 (414)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~ 181 (414)
+|++++++|+|||+.++...|+..+++.+++++..+++..++..+...+...++.++|+|||++|+|||||+..++++++
T Consensus 100 ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 179 (494)
T PRK09847 100 ELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLG 179 (494)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEecceeEEEEECCCccHHHHHHHHHH
Confidence 99999999999999887544999999999999998877655544433344568899999999999999999999999999
Q ss_pred hHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhC
Q 015020 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (414)
Q Consensus 182 ~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 261 (414)
+||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.+..|+.|+++|.|+||||+.+|+.|++.++..
T Consensus 180 ~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa~~ 259 (494)
T PRK09847 180 PALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDS 259 (494)
T ss_pred HHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999997778899999999999999999999999999988744
Q ss_pred CCcceeeecCCCCceEEcCCC-CHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCC
Q 015020 262 NLKPVSLELGGKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (414)
Q Consensus 262 ~~~~~~~elgG~~~~iV~~da-dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~ 340 (414)
+++|+++|+|||||+||++|+ |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++
T Consensus 260 ~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 339 (494)
T PRK09847 260 NMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPAT 339 (494)
T ss_pred CCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 789999999999999999997 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++||++++.+++++.++|++++++| ++++||... ..|.|++|||+.+++++|++++||+||||++|++|++
T Consensus 340 ~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~ 410 (494)
T PRK09847 340 TMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNA-GLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTS 410 (494)
T ss_pred cCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccC-CCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCC
Confidence 9999999999999999999999999 999999764 3578999999999999999999999999999999985
|
|
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-82 Score=638.97 Aligned_cols=372 Identities=28% Similarity=0.438 Sum_probs=349.0
Q ss_pred CeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchh
Q 015020 37 KTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS 116 (414)
Q Consensus 37 ~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 116 (414)
++++++||+||+++++++.++.++++++++.|+++|+ .|++++..+|.++|++++++|++|+++|++++++|+|||..
T Consensus 7 ~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 84 (462)
T PRK13968 7 THAISVNPATGEQLSVLPWAGADDIENALQLAAAGFR--DWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPIN 84 (462)
T ss_pred CceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHH
Confidence 5788999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred hhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCC
Q 015020 117 WAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196 (414)
Q Consensus 117 ~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~ 196 (414)
+++. |+..+++.+++|+...............+...++.++|+|||++|+|||||+++.++++++||++||+||+|||+
T Consensus 85 ~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~ 163 (462)
T PRK13968 85 QARA-EVAKSANLCDWYAEHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAP 163 (462)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHhhCCccccCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 9986 999999999999987765533221112344568899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCce
Q 015020 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL 276 (414)
Q Consensus 197 ~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~ 276 (414)
.+|.++.++.+++.++|+|+|++|+++|++.. ...|+.||+++.|+||||+.+|+.|++.++ .+++|+++|+|||||+
T Consensus 164 ~tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~-~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa-~~l~~~~lElGGk~p~ 241 (462)
T PRK13968 164 NVMGCAQLIAQVFKDAGIPQGVYGWLNADNDG-VSQMINDSRIAAVTVTGSVRAGAAIGAQAG-AALKKCVLELGGSDPF 241 (462)
T ss_pred cChHHHHHHHHHHHHcCcCcCcEEEEecCchh-hHHHhcCCCCCEEEEECCHHHHHHHHHHHh-hcCCcEEEecCCCCce
Confidence 99999999999999999999999999986543 456889999999999999999999999998 7899999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHH
Q 015020 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILS 356 (414)
Q Consensus 277 iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~ 356 (414)
||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.+
T Consensus 242 iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~ 321 (462)
T PRK13968 242 IVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHH 321 (462)
T ss_pred EECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 357 YIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 357 ~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++++.+|+++++||.....+|+|++||||.+++++|++++||+||||++|++|++
T Consensus 322 ~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d 378 (462)
T PRK13968 322 QVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKD 378 (462)
T ss_pred HHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECC
Confidence 999999999999999976434589999999999999999999999999999999986
|
|
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-82 Score=641.33 Aligned_cols=383 Identities=41% Similarity=0.689 Sum_probs=360.8
Q ss_pred eeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 015020 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL 103 (414)
Q Consensus 24 ~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 103 (414)
+||||+|+.+.++++++++||.||+++++++.++.++++++++.|++||+ .|+++|..+|.++|++++++|++++++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l 78 (466)
T cd07138 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP--AWSATSVEERAALLERIAEAYEARADEL 78 (466)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 58999999876678899999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhH
Q 015020 104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183 (414)
Q Consensus 104 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~A 183 (414)
++++++|+|||..++...|+...++.++++++.++....... ....++.++|+|||++|+|||||+..+++++++|
T Consensus 79 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~A 154 (466)
T cd07138 79 AQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPA 154 (466)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc----CceEEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 999999999999988644899999999999988766543221 2345778999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCC
Q 015020 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263 (414)
Q Consensus 184 LaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~ 263 (414)
|++||+||+|||+.+|.++.++.++|.++|+|+|++++++|++.++++.|+.||+++.|+||||+.+|+.|++.++ .++
T Consensus 155 LaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa-~~~ 233 (466)
T cd07138 155 LAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAA-DTV 233 (466)
T ss_pred HhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-ccC
Confidence 9999999999999999999999999999999999999999977778999999999999999999999999999998 789
Q ss_pred cceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCcc
Q 015020 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQG 343 (414)
Q Consensus 264 ~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~g 343 (414)
+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|||.++++++|
T Consensus 234 ~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 313 (466)
T cd07138 234 KRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLG 313 (466)
T ss_pred CeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 344 PQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 344 pl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
|++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 314 pli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~ 386 (466)
T cd07138 314 PLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDD 386 (466)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCC
Confidence 999999999999999999999999999996432 3589999999999999999999999999999999986
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-82 Score=641.64 Aligned_cols=385 Identities=45% Similarity=0.752 Sum_probs=364.7
Q ss_pred eEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 015020 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLA 104 (414)
Q Consensus 25 ~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 104 (414)
||||+|+.+.++..++++||+||+++++++.++.++++++++.|++|++ .|+.+|..+|.++|+++++.|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 78 (468)
T cd07088 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQK--AWERLPAIERAAYLRKLADLIRENADELA 78 (468)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6999999766678899999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred HHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecCCceEEEEcCCchhHHhhHHhHhhH
Q 015020 105 VLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183 (414)
Q Consensus 105 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~A 183 (414)
+++++|+|||..+++. |+..+++.+++++.++.+..+...+.. .+...+.+++|+|||++|+|||||+...++++++|
T Consensus 79 ~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 157 (468)
T cd07088 79 KLIVEEQGKTLSLARV-EVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPA 157 (468)
T ss_pred HHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHH
Confidence 9999999999999986 999999999999998876655443322 24567889999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCC
Q 015020 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263 (414)
Q Consensus 184 LaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~ 263 (414)
|++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|++.+.+..|+.|++++.|.||||+.+|+.|++.++ +++
T Consensus 158 L~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa-~~~ 236 (468)
T cd07088 158 LVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAA-ENI 236 (468)
T ss_pred HHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcC
Confidence 9999999999999999999999999999999999999999977678899999999999999999999999999998 899
Q ss_pred cceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCcc
Q 015020 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQG 343 (414)
Q Consensus 264 ~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~g 343 (414)
+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|
T Consensus 237 ~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 316 (468)
T cd07088 237 TKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMG 316 (468)
T ss_pred CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 344 PQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 344 pl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
|++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|+++++|+||||++|++|++
T Consensus 317 pli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 387 (468)
T cd07088 317 PLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSS 387 (468)
T ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCC
Confidence 999999999999999999999999999997643 3689999999999999999999999999999999986
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-82 Score=635.56 Aligned_cols=370 Identities=33% Similarity=0.539 Sum_probs=348.4
Q ss_pred EEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhh
Q 015020 39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA 118 (414)
Q Consensus 39 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 118 (414)
++++||+||+++++++.++.+|++++++.|++||+ .|+.+|..+|.++|++++++|++++++|++++++|+|||+.++
T Consensus 3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 80 (457)
T PRK09406 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFR--DYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASA 80 (457)
T ss_pred eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHH
Confidence 68899999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred hhCcHHHHHHHHHHHHHHhhhhcCceeec---cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecC
Q 015020 119 KMGDIPGAANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195 (414)
Q Consensus 119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps 195 (414)
.. |+..+++.++++++.+++..+..... ..+...+++++|+|||++|+|||||+++.++++++||++||+||+|||
T Consensus 81 ~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps 159 (457)
T PRK09406 81 KA-EALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHA 159 (457)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECC
Confidence 86 99999999999999887654332111 122456889999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCc
Q 015020 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP 275 (414)
Q Consensus 196 ~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~ 275 (414)
+.+|.++.++.+++.++|+|+|++|++++ +.+.+..|+.|++++.|+||||+.+|+.|++.++ ++++|+++|+|||||
T Consensus 160 ~~~p~~~~~l~~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~-~~~~~~~lElGG~~~ 237 (457)
T PRK09406 160 SNVPQTALYLADLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAG-DEIKKTVLELGGSDP 237 (457)
T ss_pred CcCcHHHHHHHHHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHH-hcCCceeeecCCCCe
Confidence 99999999999999999999999999986 3356788999999999999999999999999988 789999999999999
Q ss_pred eEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHH
Q 015020 276 LLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIL 355 (414)
Q Consensus 276 ~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~ 355 (414)
+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.
T Consensus 238 ~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~ 317 (457)
T PRK09406 238 FIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVE 317 (457)
T ss_pred eEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 356 SYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 356 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 318 ~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 375 (457)
T PRK09406 318 KQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVAD 375 (457)
T ss_pred HHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCC
Confidence 9999999999999999987545699999999999999999999999999999999985
|
|
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-82 Score=641.33 Aligned_cols=391 Identities=31% Similarity=0.543 Sum_probs=365.4
Q ss_pred CCCCccccceeEcCeEeeCCCCCeEEeecCC-CCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHH
Q 015020 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFA 93 (414)
Q Consensus 15 ~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a 93 (414)
+...++..++||||+|+.+ +..++++||+ ||+++++++.++.+|++++++.|++||+ .|+.+|..+|.++|++++
T Consensus 12 ~~~~~~~~~~~i~g~~~~~--~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a 87 (500)
T cd07083 12 KEEFGRAYPLVIGGEWVDT--KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFK--TWKDWPQEDRARLLLKAA 87 (500)
T ss_pred HhhccccccceECCEEecC--CCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHH
Confidence 3445677889999999874 4679999998 6999999999999999999999999999 999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCcee--eccCCccceeeecCCceEEEEcCCch
Q 015020 94 DLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL--KMSRALQGYTLREPIGVVGHIIPWNF 171 (414)
Q Consensus 94 ~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~Gvv~~i~p~n~ 171 (414)
+.|++++++|++++++|+|||+.++.. |+..+++.++++++.+.+..+... +...+...++.++|+|||++|+||||
T Consensus 88 ~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~ 166 (500)
T cd07083 88 DLLRRRRRELIATLTYEVGKNWVEAID-DVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNF 166 (500)
T ss_pred HHHHhCHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCcc
Confidence 999999999999999999999999886 999999999999998876654322 12234567888999999999999999
Q ss_pred hHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHH
Q 015020 172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG 251 (414)
Q Consensus 172 P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g 251 (414)
|+.+.++++++||++||+||+|||+.+|.++..++++|.++|+|+|++++++|++.+.+..|+.|++++.|+||||+.+|
T Consensus 167 P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g 246 (500)
T cd07083 167 PVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETG 246 (500)
T ss_pred HHHHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHH
Confidence 99999999999999999999999999999999999999999999999999999777889999999999999999999999
Q ss_pred HHHHHHHHhCCC------cceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHH
Q 015020 252 RQVMQAAATSNL------KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 325 (414)
Q Consensus 252 ~~i~~~~~~~~~------~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~ 325 (414)
+.|++.++ +++ +|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++
T Consensus 247 ~~v~~~aa-~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~ 325 (500)
T cd07083 247 KKIYEAAA-RLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLK 325 (500)
T ss_pred HHHHHHHh-hccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHH
Confidence 99999988 665 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccce
Q 015020 326 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPV 405 (414)
Q Consensus 326 ~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv 405 (414)
+++++++|+|.++++++||++++.+++++.++|++++++| ++++||......|+|++||||.+++++|++++||+||||
T Consensus 326 ~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPv 404 (500)
T cd07083 326 RAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPV 404 (500)
T ss_pred HHHcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCce
Confidence 9999999999999999999999999999999999999988 999999865456899999999999999999999999999
Q ss_pred eeEEEEe
Q 015020 406 MALMKFK 412 (414)
Q Consensus 406 ~~v~~~~ 412 (414)
++|++|+
T Consensus 405 l~v~~~~ 411 (500)
T cd07083 405 LSVIRYK 411 (500)
T ss_pred EEEEEeC
Confidence 9999998
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-81 Score=641.95 Aligned_cols=388 Identities=32% Similarity=0.573 Sum_probs=362.8
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCC-CCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (414)
...++||||+|+.+ +.++.++||+ ||+++++++.++.+|++++++.|++|++ .|+++|..+|.++|++++++|++
T Consensus 31 ~~~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~ 106 (511)
T TIGR01237 31 KTYPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFE--AWKKTPVRERAGILRKAAAIMER 106 (511)
T ss_pred cccceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence 45678999999964 4579999999 5999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceee-ccCCccceeeecCCceEEEEcCCchhHHhhH
Q 015020 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (414)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (414)
++++|++++++|+|||+.++.. |+..+++.+++++..++...+...+ ...+...+++++|+|||++|+|||||+..++
T Consensus 107 ~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~ 185 (511)
T TIGR01237 107 RRHELNALICLEVGKIIPEADA-EVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAV 185 (511)
T ss_pred CHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHH
Confidence 9999999999999999999986 9999999999999988766543322 2234567889999999999999999999999
Q ss_pred HhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHH
Q 015020 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (414)
Q Consensus 178 ~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (414)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.+..|+.||+++.|+||||+.+|+.|++.
T Consensus 186 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~ 265 (511)
T TIGR01237 186 GMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYED 265 (511)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777789999999999999999999999999998
Q ss_pred HHh-----CCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhcccc
Q 015020 258 AAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (414)
Q Consensus 258 ~~~-----~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (414)
++. ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 266 aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~ 345 (511)
T TIGR01237 266 AAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNV 345 (511)
T ss_pred HhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCC
Confidence 773 378999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEe
Q 015020 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (414)
Q Consensus 333 g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (414)
|+|.++++++||++++.+++++.++|++++++| ++++||......|+|++||||.+++++|++++||+||||++|++|+
T Consensus 346 g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~ 424 (511)
T TIGR01237 346 GPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAA 424 (511)
T ss_pred CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeC
Confidence 999999999999999999999999999999999 8999987544468999999999999999999999999999999997
Q ss_pred c
Q 015020 413 I 413 (414)
Q Consensus 413 ~ 413 (414)
+
T Consensus 425 ~ 425 (511)
T TIGR01237 425 D 425 (511)
T ss_pred C
Confidence 5
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-81 Score=638.01 Aligned_cols=381 Identities=26% Similarity=0.351 Sum_probs=345.6
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhh-cccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 015020 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA-FDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (414)
Q Consensus 23 ~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (414)
++||||+|+.+. +.+++++||+||+++++++.++ +|+++||++|++| |+ .|+++|..+|+++|++++++|+++++
T Consensus 2 ~~~I~g~~~~~~-~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~--~W~~~~~~~Ra~~L~~~a~~l~~~~~ 77 (513)
T cd07128 2 QSYVAGQWHAGT-GDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGP--ALRALTFHERAAMLKALAKYLMERKE 77 (513)
T ss_pred ceeECCEEEcCC-CCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhc--hhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 579999999763 5789999999999999999876 8999999999997 67 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcC--------ceeeccC-C-ccceeeecC-CceEEEEcCCc
Q 015020 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG--------EVLKMSR-A-LQGYTLREP-IGVVGHIIPWN 170 (414)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~--------~~~~~~~-~-~~~~~~~~P-~Gvv~~i~p~n 170 (414)
+|+++ ++|+|||+.+++. |+..+++.++||++++++... +..+... + ...++.++| +|||++|+|||
T Consensus 78 ~la~l-~~e~Gkp~~ea~~-Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN 155 (513)
T cd07128 78 DLYAL-SAATGATRRDSWI-DIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFN 155 (513)
T ss_pred HHHHH-HHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcc
Confidence 99996 9999999999986 999999999999998766532 2222111 1 135678999 59999999999
Q ss_pred hhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHH
Q 015020 171 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD 249 (414)
Q Consensus 171 ~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~ag-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~ 249 (414)
||+++.++++++||++||+||+|||+.+|+++.+|++++.++| +|+|++|+++|++.+++..| +.++.|+||||++
T Consensus 156 ~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~ 232 (513)
T cd07128 156 FPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAA 232 (513)
T ss_pred cHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHH
Confidence 9999999999999999999999999999999999999999999 99999999998654444433 5789999999999
Q ss_pred HHHHHHHHHH-hCCCcceeeecCCCCceEEcCCCC-----HHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHH
Q 015020 250 VGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323 (414)
Q Consensus 250 ~g~~i~~~~~-~~~~~~~~~elgG~~~~iV~~dad-----l~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l 323 (414)
+|+.|++.++ ..+++|+++|||||||+||++||| +|.+++.+++++|.|+||.|++++|+|||+++||+|+++|
T Consensus 233 ~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l 312 (513)
T cd07128 233 TAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEAL 312 (513)
T ss_pred HHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHH
Confidence 9999999852 268899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-------CCCCCeEeeEEEeeCCCC--C
Q 015020 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI-------GKKGYYIEPTIFTNVTED--M 394 (414)
Q Consensus 324 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-------~~~g~~~~Ptvl~~~~~~--~ 394 (414)
+++++++++|+|.++++++|||+++.+++++.++|++|+++ |++++||... ..+|+|++||||.+++++ |
T Consensus 313 ~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 391 (513)
T cd07128 313 KARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAAT 391 (513)
T ss_pred HHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccc
Confidence 99999999999999999999999999999999999999988 9999999652 135899999999999874 8
Q ss_pred cccccccccceeeEEEEec
Q 015020 395 LIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 395 ~i~~~E~fgPv~~v~~~~~ 413 (414)
++++||+||||++|++|++
T Consensus 392 ~i~~eE~FGPVl~V~~~~~ 410 (513)
T cd07128 392 AVHDVEAFGPVATLMPYDS 410 (513)
T ss_pred hHHhCCCcCCeEEEEeeCC
Confidence 9999999999999999985
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-81 Score=641.75 Aligned_cols=386 Identities=36% Similarity=0.585 Sum_probs=361.6
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCC-CCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (414)
...++||||+|+.+ +.+++++||+ ||+++++++.++.++++++++.|++||+ .|++++..+|.++|++++++|++
T Consensus 35 ~~~~~~i~g~~~~~--~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~ 110 (514)
T PRK03137 35 QDYPLIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFE--TWKKWSPEDRARILLRAAAIIRR 110 (514)
T ss_pred cccceeECCEEecC--CCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence 45678999999964 4679999999 6999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhc-CceeeccCCccceeeecCCceEEEEcCCchhHHhhH
Q 015020 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH-GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (414)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (414)
++++|++++++|+|||+.+++. |+..+++.+++|++.+.+.. +.......+...+++++|+|||++|+|||||+.+.+
T Consensus 111 ~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~ 189 (514)
T PRK03137 111 RKHEFSAWLVKEAGKPWAEADA-DTAEAIDFLEYYARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPFAIMA 189 (514)
T ss_pred CHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEecCcEEEEECCCccHHHHHH
Confidence 9999999999999999999986 99999999999998886653 222222244567899999999999999999999999
Q ss_pred HhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHH
Q 015020 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (414)
Q Consensus 178 ~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (414)
+++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|++.+.+..|+.|++++.|+||||+.+|+.|++.
T Consensus 190 ~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~ 269 (514)
T PRK03137 190 GMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYER 269 (514)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777789999999999999999999999999999
Q ss_pred HHhC------CCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccc
Q 015020 258 AATS------NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (414)
Q Consensus 258 ~~~~------~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~ 331 (414)
++ . ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 270 aa-~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~ 348 (514)
T PRK03137 270 AA-KVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELT 348 (514)
T ss_pred Hh-cccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCC
Confidence 87 4 6899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEE
Q 015020 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411 (414)
Q Consensus 332 ~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~ 411 (414)
+|+|.++. ++||++++.+++++.++|++++++ +++++||......|+|++||||.+++++|++++||+||||++|++|
T Consensus 349 ~g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~ 426 (514)
T PRK03137 349 VGNPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKA 426 (514)
T ss_pred CCCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEec
Confidence 99999998 999999999999999999999887 5999999765446899999999999999999999999999999999
Q ss_pred ec
Q 015020 412 KI 413 (414)
Q Consensus 412 ~~ 413 (414)
++
T Consensus 427 ~~ 428 (514)
T PRK03137 427 KD 428 (514)
T ss_pred CC
Confidence 85
|
|
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-81 Score=636.34 Aligned_cols=388 Identities=43% Similarity=0.730 Sum_probs=361.2
Q ss_pred eeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 015020 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL 103 (414)
Q Consensus 24 ~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 103 (414)
+||||+|+.+.++++++++||+||+++++++.++.+++++++++|++||+.+.|+.+|..+|.++|++++++|++++++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 80 (471)
T cd07139 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL 80 (471)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 48999999765567899999999999999999999999999999999998334999999999999999999999999999
Q ss_pred HHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCce-eeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhh
Q 015020 104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (414)
Q Consensus 104 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ 182 (414)
++++++|+|||..++...|+..+++.+++++..++...... .+...+...++.++|+|||++|+|||||+.+.++++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ 160 (471)
T cd07139 81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAP 160 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHH
Confidence 99999999999987754589999999999998876554322 22223445688999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCC
Q 015020 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262 (414)
Q Consensus 183 ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~ 262 (414)
||++||+||+|||+.+|+++..+.++|.++|+|+|++++++| +.+.+..|+.|++++.|+||||+.+|+.|++.++ ++
T Consensus 161 ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~-~~ 238 (471)
T cd07139 161 ALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCG-ER 238 (471)
T ss_pred HHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hc
Confidence 999999999999999999999999999999999999999998 5568899999999999999999999999999998 88
Q ss_pred CcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCc
Q 015020 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQ 342 (414)
Q Consensus 263 ~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~ 342 (414)
++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++
T Consensus 239 ~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 318 (471)
T cd07139 239 LARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQI 318 (471)
T ss_pred CCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 343 GPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 343 gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
||++++.+++++.++|++++.+|+++++||.... ..|+|++||||.+++++|++++||+||||++|++|++
T Consensus 319 gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~ 391 (471)
T cd07139 319 GPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDD 391 (471)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCC
Confidence 9999999999999999999999999999997543 3589999999999999999999999999999999985
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-81 Score=638.03 Aligned_cols=386 Identities=42% Similarity=0.709 Sum_probs=363.2
Q ss_pred eeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 015020 24 LFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (414)
Q Consensus 24 ~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (414)
+||||+|+.+.++++++++||+| ++++++++.++.+|++++++.|++|++ .|++++..+|.++|+++++.|.+++++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~e 78 (478)
T cd07131 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFP--EWRKVPAPRRAEYLFRAAELLKKRKEE 78 (478)
T ss_pred CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999766678899999999 689999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecCCceEEEEcCCchhHHhhHHhHh
Q 015020 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181 (414)
Q Consensus 103 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~ 181 (414)
|++++++|+|||..+++. |+..+++.+++++..++...+...+.. .+...+.+++|+|||++|+|||||+.+.+++++
T Consensus 79 la~~~~~e~Gk~~~~~~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 157 (478)
T cd07131 79 LARLVTREMGKPLAEGRG-DVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIF 157 (478)
T ss_pred HHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHH
Confidence 999999999999999986 999999999999988776554433321 234568999999999999999999999999999
Q ss_pred hHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhC
Q 015020 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (414)
Q Consensus 182 ~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 261 (414)
+||++||+||+|||+.+|+++..+.++|.++|+|+|++++++|++.+.+..|+.||+++.|+||||+.+|+.|++.++ +
T Consensus 158 ~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa-~ 236 (478)
T cd07131 158 PALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCA-R 236 (478)
T ss_pred HHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-h
Confidence 999999999999999999999999999999999999999999977678999999999999999999999999999998 7
Q ss_pred CCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCC
Q 015020 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR 341 (414)
Q Consensus 262 ~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~ 341 (414)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++++|+++|+++++++++|+|.+++++
T Consensus 237 ~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~ 316 (478)
T cd07131 237 PNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETD 316 (478)
T ss_pred cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+||++++.+++++.++|++|+++|+++++||.... ..|+|++||||.+++++|+++++|+||||++|++|++
T Consensus 317 ~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~ 392 (478)
T cd07131 317 MGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSS 392 (478)
T ss_pred CCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCC
Confidence 99999999999999999999999999999997532 3589999999999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-81 Score=635.14 Aligned_cols=379 Identities=40% Similarity=0.663 Sum_probs=357.7
Q ss_pred CeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 015020 28 GEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLE 107 (414)
Q Consensus 28 g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~ 107 (414)
|+|+.+.++..++++||+||+++++++.++.+|++++++.|++|++ .|+++|..+|.++|++++++|++++++|++++
T Consensus 1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~ 78 (465)
T cd07151 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQK--EWAATLPQERAEILEKAAQILEERRDEIVEWL 78 (465)
T ss_pred CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 6788765567899999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhc
Q 015020 108 ALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAA 186 (414)
Q Consensus 108 ~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaa 186 (414)
++|+|||+.++.. |+..+++.+++++.+.++..+...+.. .+...++.++|+|||++|+|||||+.+.++++++||++
T Consensus 79 ~~e~Gk~~~~a~~-Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaa 157 (465)
T cd07151 79 IRESGSTRIKANI-EWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALAL 157 (465)
T ss_pred HHHcCCCHHHHHH-HHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHc
Confidence 9999999999986 999999999999988766654443321 34557889999999999999999999999999999999
Q ss_pred CCEEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcc
Q 015020 187 GCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKP 265 (414)
Q Consensus 187 GN~vvlkps~~~~~~~-~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~ 265 (414)
||+||+|||+.+|.++ .++.+++.++|+|+|++|+++|++.+++..|+.||.++.|+||||+.+|+.|++.++ ++++|
T Consensus 158 GN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa-~~~~~ 236 (465)
T cd07151 158 GNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAG-RHLKK 236 (465)
T ss_pred CCEEEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCc
Confidence 9999999999999996 689999999999999999999977778999999999999999999999999999998 78999
Q ss_pred eeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCcccc
Q 015020 266 VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ 345 (414)
Q Consensus 266 ~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl 345 (414)
+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+
T Consensus 237 ~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl 316 (465)
T cd07151 237 VALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPL 316 (465)
T ss_pred EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 346 VDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 346 ~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 317 i~~~~~~~v~~~v~~a~~~ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 381 (465)
T cd07151 317 INESQVDGLLDKIEQAVEEGATLLVGGEA---EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADD 381 (465)
T ss_pred cCHHHHHHHHHHHHHHHhCCCEEEecCCc---CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCC
Confidence 99999999999999999999999999964 589999999999999999999999999999999986
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-82 Score=634.33 Aligned_cols=369 Identities=41% Similarity=0.705 Sum_probs=349.5
Q ss_pred eecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhh
Q 015020 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120 (414)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 120 (414)
++||+||+++++++.++.++++.+++.|++|++ .|+.+|..+|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 78 (448)
T TIGR01780 1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFK--TWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKG 78 (448)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999999986
Q ss_pred CcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCCh
Q 015020 121 GDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199 (414)
Q Consensus 121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~ 199 (414)
|+..+++.+++++...++..+...+. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 79 -ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p 157 (448)
T TIGR01780 79 -EILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTP 157 (448)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccch
Confidence 99999999999998777665544332 2334557789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCC-chhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEE
Q 015020 200 LIALYFAHLAKLAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278 (414)
Q Consensus 200 ~~~~~l~~~l~~aglP~g~~~~v~g~-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV 278 (414)
+++..++++|.++|+|+|++|+++|+ +.+.++.|+.||+++.|+||||+.+|+.|++.++ .+++|+++|+|||||+||
T Consensus 158 ~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa-~~~~~~~lElGGk~~~iV 236 (448)
T TIGR01780 158 LSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSA-STVKKVSMELGGNAPFIV 236 (448)
T ss_pred HHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hcCCceEeecCCCCeeEE
Confidence 99999999999999999999999997 6678899999999999999999999999999998 789999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHH
Q 015020 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYI 358 (414)
Q Consensus 279 ~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i 358 (414)
++|||++.+++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|
T Consensus 237 ~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i 316 (448)
T TIGR01780 237 FDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHI 316 (448)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 359 EHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 359 ~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 317 ~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~ 371 (448)
T TIGR01780 317 ADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDD 371 (448)
T ss_pred HHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECC
Confidence 9999999999999976444689999999999999999999999999999999986
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-81 Score=634.27 Aligned_cols=387 Identities=43% Similarity=0.719 Sum_probs=361.8
Q ss_pred cccCCCCccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHH
Q 015020 12 SLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLK 91 (414)
Q Consensus 12 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~ 91 (414)
.|+..-. +..++||||+|+.+.++++++++||+||+++++++.++.++++++++.|+++|+ .|+++|..+|.++|++
T Consensus 13 ~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~--~w~~~~~~~R~~~L~~ 89 (480)
T cd07111 13 AWLDAHD-RSFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFE--SWSALPGHVRARHLYR 89 (480)
T ss_pred HHhhhcc-ccccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHH
Confidence 3444322 457889999999865567899999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCch
Q 015020 92 FADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNF 171 (414)
Q Consensus 92 ~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~ 171 (414)
++++|++++++|++++++|+|||+.+++..|+..+++.+++++.+++...+ .+..++|+|||++|+||||
T Consensus 90 ~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~----------~~~~~~P~GVV~~I~PwN~ 159 (480)
T cd07111 90 IARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT----------ELAGWKPVGVVGQIVPWNF 159 (480)
T ss_pred HHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------CcccceecceEEEECCCcc
Confidence 999999999999999999999999999745899999999999887765421 2456899999999999999
Q ss_pred hHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHH
Q 015020 172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG 251 (414)
Q Consensus 172 P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g 251 (414)
|+...++++++||++||+||+|||+.+|.++..|++++.++|+|+|++++++|++ +.+..|+.|++++.|+||||+.+|
T Consensus 160 P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~~~g 238 (480)
T cd07111 160 PLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVG 238 (480)
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCcCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999999999999999999965 678999999999999999999999
Q ss_pred HHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccc
Q 015020 252 RQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (414)
Q Consensus 252 ~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~ 331 (414)
+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++++++
T Consensus 239 ~~v~~~aa-~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~ 317 (480)
T cd07111 239 RALRRATA-GTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLR 317 (480)
T ss_pred HHHHHHHh-ccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcC
Confidence 99999998 78999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEE
Q 015020 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411 (414)
Q Consensus 332 ~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~ 411 (414)
+|+|.++++++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 318 vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~ 397 (480)
T cd07111 318 VGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTF 397 (480)
T ss_pred CCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecC
Confidence 99999999999999999999999999999999999999998754346899999999999999999999999999999999
Q ss_pred ec
Q 015020 412 KI 413 (414)
Q Consensus 412 ~~ 413 (414)
++
T Consensus 398 ~~ 399 (480)
T cd07111 398 RT 399 (480)
T ss_pred CC
Confidence 75
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-81 Score=633.93 Aligned_cols=385 Identities=31% Similarity=0.518 Sum_probs=361.2
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 015020 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (414)
Q Consensus 23 ~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (414)
++||||+|+.+.+++.++++||+||+++++++.++.++++++++.|++|++ .|+++|..+|.++|++++++|++++++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (477)
T TIGR01722 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFL--TWGQTSLAQRTSVLLRYQALLKEHRDE 79 (477)
T ss_pred ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999766678899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHhhHHhHh
Q 015020 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181 (414)
Q Consensus 103 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~ 181 (414)
|++++++|+|||+.+++. |+..+++.+++++.......+...+. ..+...+..++|+|||++|+|||||+.+.+++++
T Consensus 80 l~~~~~~e~Gk~~~~a~~-ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 158 (477)
T TIGR01722 80 IAELITAEHGKTHSDALG-DVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFP 158 (477)
T ss_pred HHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHH
Confidence 999999999999999986 99999999999988777655544332 1334567889999999999999999999999999
Q ss_pred hHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhC
Q 015020 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (414)
Q Consensus 182 ~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 261 (414)
+||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++| +.+.+..|+.||+++.|+||||+.+|+.|++.++ .
T Consensus 159 ~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g-~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~-~ 236 (477)
T TIGR01722 159 IAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGS-A 236 (477)
T ss_pred HHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeC-CHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHH-h
Confidence 9999999999999999999999999999999999999999998 4467889999999999999999999999999988 7
Q ss_pred CCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCC
Q 015020 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR 341 (414)
Q Consensus 262 ~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~ 341 (414)
.+||+++|+||+||+||++|||+|.|++.+++++|.|+||.|++++|||||+++ ++|+++|+++++++++|+|.+++++
T Consensus 237 ~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~ 315 (477)
T TIGR01722 237 HGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAE 315 (477)
T ss_pred cCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCC
Confidence 899999999999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc--C--CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI--G--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~--~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
||||+++++++++.++|++|+++|+++++||... . .+|+|++|||+.+++++|+++++|+||||++|++|++
T Consensus 316 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~ 391 (477)
T TIGR01722 316 MGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADT 391 (477)
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCC
Confidence 9999999999999999999999999999999752 1 3589999999999999999999999999999999985
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-81 Score=633.81 Aligned_cols=384 Identities=30% Similarity=0.465 Sum_probs=354.9
Q ss_pred eeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 015020 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL 103 (414)
Q Consensus 24 ~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 103 (414)
+||||+|+.+ ++++++++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|++++++|++++++|
T Consensus 1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 77 (484)
T TIGR03240 1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFP--AWARLSLEERIAVVQRFAALLEERKEAL 77 (484)
T ss_pred CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 5899999875 467899999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhH
Q 015020 104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183 (414)
Q Consensus 104 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~A 183 (414)
++++++|+|||..+++. |+..+++.+++++.......+.......+...++.++|+|||++|+|||||+...++++++|
T Consensus 78 a~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~A 156 (484)
T TIGR03240 78 ARVIARETGKPLWETRT-EVASMIGKVAISIKAYHERTGESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPA 156 (484)
T ss_pred HHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHH
Confidence 99999999999999986 99999999998887765544433222233456788999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCC
Q 015020 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263 (414)
Q Consensus 184 LaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~ 263 (414)
|++||+||+|||+.+|+++..+.+++.++|+|+|++|+++| +.+.++.|+.||++|.|+||||+.+|+.|++.++....
T Consensus 157 LaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~ 235 (484)
T TIGR03240 157 LLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPE 235 (484)
T ss_pred HHcCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCC
Confidence 99999999999999999999999999999999999999999 55789999999999999999999999999998773446
Q ss_pred cceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchH-HHHHHHHHHHHhccccCCC-CCCCCC
Q 015020 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFEKKLVEKAKAWVVGDP-FDPAVR 341 (414)
Q Consensus 264 ~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p-~~~~~~ 341 (414)
+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++ |+|+++|.++++++++|+| .+++++
T Consensus 236 ~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~ 315 (484)
T TIGR03240 236 KILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPF 315 (484)
T ss_pred CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCc
Confidence 88999999999999999999999999999999999999999999999999985 9999999999999999997 577889
Q ss_pred ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+||++++++++++.++|++++++|+++++||...+..|+|++|||+ +++++|+++++|+||||++|++|++
T Consensus 316 ~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~ 386 (484)
T TIGR03240 316 MGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDD 386 (484)
T ss_pred ccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCC
Confidence 9999999999999999999999999999988754446789999999 6999999999999999999999985
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-81 Score=629.60 Aligned_cols=380 Identities=32% Similarity=0.526 Sum_probs=354.6
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
+..++||||+|+. ++.+++++||+||+++++++.++.+|+++|++.|++++. .++..+|.++|++++++|+++
T Consensus 2 ~~~~~~i~g~~~~--~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~-----~~~~~~R~~~l~~~a~~l~~~ 74 (472)
T TIGR03250 2 RAEALRIAGEKVS--RDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYRP-----TLTRYERSAILDRAAALLAAR 74 (472)
T ss_pred CCCCceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHHHHHHHh
Confidence 3457899999986 357899999999999999999999999999999988764 678999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceee-----ccCCccceeeecCC-ceEEEEcCCchhH
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-----MSRALQGYTLREPI-GVVGHIIPWNFPT 173 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~P~-Gvv~~i~p~n~P~ 173 (414)
+++|++++++|+|||..+++. |+..+++.+++++..+.+..+...+ ...+...++.++|+ |||++|+|||||+
T Consensus 75 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~ 153 (472)
T TIGR03250 75 KEEISDLITLESGLSKKDSLY-EVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPM 153 (472)
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHH
Confidence 999999999999999999986 9999999999999887665443321 11234567899998 9999999999999
Q ss_pred HhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHH
Q 015020 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (414)
Q Consensus 174 ~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~ 253 (414)
.+.++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|++.+.+..|+.||+++.|+||||+.+|+.
T Consensus 154 ~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~ 233 (472)
T TIGR03250 154 NQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKY 233 (472)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999977778999999999999999999999999
Q ss_pred HHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccC
Q 015020 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (414)
Q Consensus 254 i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g 333 (414)
|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 234 i~~~a~---~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G 310 (472)
T TIGR03250 234 IAARAG---YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYG 310 (472)
T ss_pred HHHHhc---CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCC
Confidence 998875 68999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 334 ~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+|.++++++||++++.+++++.++|++++++|+++++||.. .|+|++||||.+++++|++++||+||||++|++|++
T Consensus 311 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~ 387 (472)
T TIGR03250 311 DPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR---DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCD 387 (472)
T ss_pred CCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc---CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCC
Confidence 99999999999999999999999999999999999999964 589999999999999999999999999999999986
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-80 Score=646.88 Aligned_cols=381 Identities=25% Similarity=0.344 Sum_probs=347.9
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhh-cccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 015020 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA-FDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (414)
Q Consensus 23 ~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (414)
++||||+|+.+. +++++++||+||+++++++.++ .|+++|+++|+++ |+ .|+++|..+|.++|++++++|+++++
T Consensus 2 ~~~i~g~~~~~~-~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~--~W~~~~~~eR~~~L~~~a~~l~~~~~ 77 (663)
T TIGR02278 2 QSYLSGEWRTGQ-GEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGP--ALRALTFHERARMLKALAQYLSERKE 77 (663)
T ss_pred ceeECCEEEcCC-CCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcch--hhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 579999999753 5689999999999999999999 6999999999996 88 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhc--------CceeeccC--CccceeeecCC-ceEEEEcCCc
Q 015020 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH--------GEVLKMSR--ALQGYTLREPI-GVVGHIIPWN 170 (414)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~~~--~~~~~~~~~P~-Gvv~~i~p~n 170 (414)
+|++ +++|+|||+.+++. |+..+++.+++|+..+++.. ++..+... +...++.++|+ |||++|+|||
T Consensus 78 ela~-~~~e~GK~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN 155 (663)
T TIGR02278 78 ALYA-LAATTGATRRDNWV-DIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFN 155 (663)
T ss_pred HHHH-HHHHcCCCHHHHHH-HHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCc
Confidence 9999 59999999999986 99999999999999876532 23233211 22468899998 9999999999
Q ss_pred hhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHH
Q 015020 171 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD 249 (414)
Q Consensus 171 ~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~ag-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~ 249 (414)
||+.+.++++++||++||+||+|||+.+|+++.++.++|.++| +|+|++|+++|+. +..+..++.++.|+||||+.
T Consensus 156 ~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~---~~~~~~~~~~~~V~FTGS~~ 232 (663)
T TIGR02278 156 FPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSA---GDLLDHLDHRDVVAFTGSAA 232 (663)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh---HHHHhcCCCCCEEEEECCHH
Confidence 9999999999999999999999999999999999999999999 9999999999853 23333347789999999999
Q ss_pred HHHHHHHHHH-hCCCcceeeecCCCCceEEcCCCC-----HHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHH
Q 015020 250 VGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323 (414)
Q Consensus 250 ~g~~i~~~~~-~~~~~~~~~elgG~~~~iV~~dad-----l~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l 323 (414)
+|+.|++.++ .++++|+++|||||||+||++||| ++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus 233 ~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l 312 (663)
T TIGR02278 233 TADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKAL 312 (663)
T ss_pred HHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHH
Confidence 9999998742 268899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCC-cccccccc
Q 015020 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDM-LIAKNEIF 402 (414)
Q Consensus 324 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~-~i~~~E~f 402 (414)
+++++++++|+|.++++++|||+++.+++++.++|++|+++|+++++||... .+|+|++||||.+++++| ++++||+|
T Consensus 313 ~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-~~g~~~~PTvl~~~~~~~~~i~~eE~F 391 (663)
T TIGR02278 313 QARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGR-LDGAFFPPTLLLAEDPWAGAVHATEAF 391 (663)
T ss_pred HHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC-CCCeeEccEEEeeCCcchhhHHhcccc
Confidence 9999999999999999999999999999999999999999999999999764 358999999999999886 79999999
Q ss_pred cceeeEEEEec
Q 015020 403 GPVMALMKFKI 413 (414)
Q Consensus 403 gPv~~v~~~~~ 413 (414)
|||++|++|++
T Consensus 392 GPVl~V~~~~~ 402 (663)
T TIGR02278 392 GPVATFFPYGD 402 (663)
T ss_pred CCeEEEEeeCC
Confidence 99999999986
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-80 Score=622.06 Aligned_cols=370 Identities=39% Similarity=0.654 Sum_probs=348.2
Q ss_pred eecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhh
Q 015020 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120 (414)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 120 (414)
++||+||+++++++.++.+|+++|++.|+++|+.+.|+. +..+|.++|++++++|++|+++|++++++|+|||..+++.
T Consensus 1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 79 (455)
T cd07120 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEARF 79 (455)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999997223998 9999999999999999999999999999999999999986
Q ss_pred CcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChH
Q 015020 121 GDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200 (414)
Q Consensus 121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~ 200 (414)
|+..+++.+++|+..+++..+...+...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.
T Consensus 80 -Ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~ 158 (455)
T cd07120 80 -EISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQ 158 (455)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChH
Confidence 9999999999999988776554433233456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-cCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEc
Q 015020 201 IALYFAHLAKL-AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF 279 (414)
Q Consensus 201 ~~~~l~~~l~~-aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~ 279 (414)
++..++++|.+ +|+|+|++|+++|++.+++..|+.||+++.|+||||+.+|+.|++.++ ++++|+++|+|||||+||+
T Consensus 159 ~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa-~~~~~~~lElGG~~~~IV~ 237 (455)
T cd07120 159 INAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAA-PTLKRLGLELGGKTPCIVF 237 (455)
T ss_pred HHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCeEEEECCCCCeeEEC
Confidence 99999999999 799999999999977778999999999999999999999999999998 7899999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHH
Q 015020 280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE 359 (414)
Q Consensus 280 ~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~ 359 (414)
+|+|+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+
T Consensus 238 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~ 317 (455)
T cd07120 238 DDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVE 317 (455)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEeCCcccC---CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 360 HGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 360 ~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++++|+++++||.... .+|+|++|||+.+++++|+++++|+||||++|++|++
T Consensus 318 ~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~ 374 (455)
T cd07120 318 RAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDD 374 (455)
T ss_pred HHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCC
Confidence 99999999999886432 2589999999999999999999999999999999986
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-80 Score=626.58 Aligned_cols=383 Identities=30% Similarity=0.462 Sum_probs=356.5
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
...++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|+++|+ .|+.++..+|.++|+++++.|+++
T Consensus 14 ~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~ 91 (496)
T PLN00412 14 DVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQK--AWAKTPLWKRAELLHKAAAILKEH 91 (496)
T ss_pred cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHh
Confidence 567899999999766678899999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcC--ceee-----c-cCCccceeeecCCceEEEEcCCch
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG--EVLK-----M-SRALQGYTLREPIGVVGHIIPWNF 171 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~--~~~~-----~-~~~~~~~~~~~P~Gvv~~i~p~n~ 171 (414)
+++|++++++|+|||+.+++. |+..+++.+++++..+.+... ...+ . ..+...+++++|+|||++|+||||
T Consensus 92 ~~el~~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~ 170 (496)
T PLN00412 92 KAPIAECLVKEIAKPAKDAVT-EVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNY 170 (496)
T ss_pred HHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCc
Confidence 999999999999999999986 999999999999877655432 1111 1 112245788999999999999999
Q ss_pred hHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHH
Q 015020 172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG 251 (414)
Q Consensus 172 P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g 251 (414)
|+.+.++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.+..|..||+++.|.|||| .+|
T Consensus 171 P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g 249 (496)
T PLN00412 171 PVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTG 249 (496)
T ss_pred hHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHH
Confidence 9999999999999999999999999999999999999999999999999999977778999999999999999999 999
Q ss_pred HHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccc
Q 015020 252 RQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (414)
Q Consensus 252 ~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~ 331 (414)
+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 250 ~~v~~~a~---~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 326 (496)
T PLN00412 250 IAISKKAG---MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLT 326 (496)
T ss_pred HHHHHHhC---CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCc
Confidence 99998875 789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEE
Q 015020 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411 (414)
Q Consensus 332 ~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~ 411 (414)
+|+|.+ ++++||++++.+++++.++|++++.+|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|
T Consensus 327 ~g~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~ 402 (496)
T PLN00412 327 VGPPED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI 402 (496)
T ss_pred cCCCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEe
Confidence 999987 789999999999999999999999999999998753 6899999999999999999999999999999999
Q ss_pred ec
Q 015020 412 KI 413 (414)
Q Consensus 412 ~~ 413 (414)
++
T Consensus 403 ~~ 404 (496)
T PLN00412 403 NS 404 (496)
T ss_pred CC
Confidence 85
|
|
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-80 Score=622.67 Aligned_cols=370 Identities=49% Similarity=0.832 Sum_probs=348.9
Q ss_pred ecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhC
Q 015020 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG 121 (414)
Q Consensus 42 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ 121 (414)
.||+||+++++++.++.+|++++++.|++||+++.|+++|.++|.++|+++++.|++++++|++++++|+|||+.+++.
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~- 80 (454)
T cd07118 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQARG- 80 (454)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-
Confidence 5899999999999999999999999999999733499999999999999999999999999999999999999999986
Q ss_pred cHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChH
Q 015020 122 DIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200 (414)
Q Consensus 122 ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~ 200 (414)
|+..+++.+++++.+.+...+...+. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~ 160 (454)
T cd07118 81 EIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSG 160 (454)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcH
Confidence 99999999999998776655443332 23345678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcC
Q 015020 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280 (414)
Q Consensus 201 ~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~ 280 (414)
++..+.++|.++|+|+|++++++|++.+++..|+.|++++.|+||||+++|+.|++.++ .+++|+++|+|||||+||++
T Consensus 161 ~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa-~~~~~~~lelgG~n~~iV~~ 239 (454)
T cd07118 161 TTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAA-RNLKKVSLELGGKNPQIVFA 239 (454)
T ss_pred HHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcCCcEEeccCCCCceEECC
Confidence 99999999999999999999999977678999999999999999999999999999998 78999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHH
Q 015020 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH 360 (414)
Q Consensus 281 dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~ 360 (414)
|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++
T Consensus 240 dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 319 (454)
T cd07118 240 DADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDA 319 (454)
T ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEeCCcccC-CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 361 GKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 361 a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 320 a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 373 (454)
T cd07118 320 GRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDT 373 (454)
T ss_pred HHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECC
Confidence 9999999999998653 3689999999999999999999999999999999985
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-81 Score=630.24 Aligned_cols=379 Identities=48% Similarity=0.775 Sum_probs=358.4
Q ss_pred EeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 015020 30 FVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEAL 109 (414)
Q Consensus 30 ~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~ 109 (414)
|+.+.+ ++++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++
T Consensus 1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~ 77 (462)
T PF00171_consen 1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFK--EWSKLPAAERARILERFADLLEERRDELAELIAL 77 (462)
T ss_dssp EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHH--HHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHH--hhhhhhhhhHHHHHHHHHHHHhhccccccccccc
Confidence 777655 6799999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCE
Q 015020 110 DAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT 189 (414)
Q Consensus 110 e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~ 189 (414)
|+|||..+++. |+..+++.+++++.+++++.++..+...+...++.++|+|||++|+|||||+...++++++||++||+
T Consensus 78 e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~ 156 (462)
T PF00171_consen 78 ETGKPIAEARG-EVDRAIDFLRYYADAARKLAGEVLPSDPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNT 156 (462)
T ss_dssp HHTSSHHHHHH-HHHHHHHHHHHHHHHHHHHTEEEEEESTTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-E
T ss_pred ccccccccccc-hhhhhhhhhhhhhhcccceehhhcccccccccccccccccceeecccccccccccccchhhhhccccc
Confidence 99999999998 99999999999999998876666555567789999999999999999999999999999999999999
Q ss_pred EEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeee
Q 015020 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE 269 (414)
Q Consensus 190 vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~e 269 (414)
||+|||+.+|.++.++.+++.++|+|+|++|+++|++.+.+..|+.||+++.|+||||+.+|+.|++.++ ++++|+++|
T Consensus 157 VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~-~~~~~v~le 235 (462)
T PF00171_consen 157 VVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAA-KNLKPVVLE 235 (462)
T ss_dssp EEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHH-TTTSEEEEE
T ss_pred ceeeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcc-ccccccccc
Confidence 9999999999999999999999999999999999988899999999999999999999999999999998 889999999
Q ss_pred cCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHH
Q 015020 270 LGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKK 349 (414)
Q Consensus 270 lgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~ 349 (414)
+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..
T Consensus 236 lgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~ 315 (462)
T PF00171_consen 236 LGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKA 315 (462)
T ss_dssp ECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHH
T ss_pred ccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCEEEeCC---cccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 350 QFDRILSYIEHGKREGATLLTGG---KPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 350 ~~~~~~~~i~~a~~~Ga~v~~gg---~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++++.++|++++.+||++++|| .....+|+|++|||+.+++++|+++++|+||||++|++|++
T Consensus 316 ~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 382 (462)
T PF00171_consen 316 QRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDD 382 (462)
T ss_dssp HHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESS
T ss_pred hhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceeccccc
Confidence 99999999999999999999999 23346799999999999999999999999999999999985
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-80 Score=626.69 Aligned_cols=383 Identities=25% Similarity=0.377 Sum_probs=344.8
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhc-ccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 015020 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAF-DHGPWPRFSGAERRGIMLKFADLIEEHA 100 (414)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~-~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (414)
.++||||+|+.+ ++.+++++||+||+++++++. +.+|+++|++.|++|+ + .|+++|..+|.++|++++++|++++
T Consensus 5 ~~~~i~G~~~~~-~~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~--~W~~~~~~eR~~~L~~~a~~l~~~~ 80 (521)
T PRK11903 5 LANYVAGRWQAG-SGAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGA--ALRALTYAQRAALLAAIVKVLQANR 80 (521)
T ss_pred hhhhCCCEEEcC-CCCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhh--hhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 468999999975 346899999999999999997 8899999999999995 7 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc---------CCccceeeecC-CceEEEEcCCc
Q 015020 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS---------RALQGYTLREP-IGVVGHIIPWN 170 (414)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~P-~Gvv~~i~p~n 170 (414)
++|++++++|+|||+.+++. |+..+++.+++|+.++....+...... .....++.++| +|||++|+|||
T Consensus 81 ~ela~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN 159 (521)
T PRK11903 81 DAYYDIATANSGTTRNDSAV-DIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFN 159 (521)
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcc
Confidence 99999999999999999986 999999999999998866543221100 12234677899 69999999999
Q ss_pred hhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHH
Q 015020 171 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD 249 (414)
Q Consensus 171 ~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~ag-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~ 249 (414)
||+.+.++++++||++||+||+|||+.+|.++..|.+++.++| +|+|++|+++|++.+++..| ++++.|+||||+.
T Consensus 160 ~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~ 236 (521)
T PRK11903 160 FPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAE 236 (521)
T ss_pred hHHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHH
Confidence 9999999999999999999999999999999999999999999 99999999999665555444 7899999999999
Q ss_pred HHHHHHHHHH-hCCCcceeeecCCCCceEEcCCCC-----HHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHH
Q 015020 250 VGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323 (414)
Q Consensus 250 ~g~~i~~~~~-~~~~~~~~~elgG~~~~iV~~dad-----l~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l 323 (414)
+|+.|++.++ ..+++|+++|+|||||+||++||| ++.+++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus 237 ~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L 316 (521)
T PRK11903 237 TAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEAL 316 (521)
T ss_pred HHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHH
Confidence 9999998642 267899999999999999999999 5999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc------CCCCCeEeeEEEeeCCC--CCc
Q 015020 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI------GKKGYYIEPTIFTNVTE--DML 395 (414)
Q Consensus 324 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~------~~~g~~~~Ptvl~~~~~--~~~ 395 (414)
+++++++++|+|.++++++|||+++.+++++.++|+.. .+|+++++||... ..+|+|++||||.++++ +++
T Consensus 317 ~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~ 395 (521)
T PRK11903 317 AARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATA 395 (521)
T ss_pred HHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccch
Confidence 99999999999999999999999999999999999964 5799999999652 13589999999987655 478
Q ss_pred ccccccccceeeEEEEec
Q 015020 396 IAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 396 i~~~E~fgPv~~v~~~~~ 413 (414)
+++||+||||++|++|++
T Consensus 396 i~~eE~FGPvl~V~~~~~ 413 (521)
T PRK11903 396 VHDVEVFGPVATLLPYRD 413 (521)
T ss_pred HHhCcccCCeEEEEeeCC
Confidence 999999999999999986
|
|
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-80 Score=624.33 Aligned_cols=369 Identities=36% Similarity=0.645 Sum_probs=349.1
Q ss_pred EEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhh
Q 015020 39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA 118 (414)
Q Consensus 39 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 118 (414)
++++||+||+++++++.++.+|++++++.|++||+ .|+++|..+|.++|++++++|++++++|++++++|+|||+.++
T Consensus 1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 78 (456)
T cd07145 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKD--VMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQS 78 (456)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH
Confidence 36789999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred hhCcHHHHHHHHHHHHHHhhhhcCceeecc-----CCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEe
Q 015020 119 KMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193 (414)
Q Consensus 119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlk 193 (414)
+. |+..+++.++++++.++...+...+.. .+...+..++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 79 ~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~K 157 (456)
T cd07145 79 RV-EVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVK 157 (456)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEE
Confidence 86 999999999999987765544432221 133467889999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCC
Q 015020 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273 (414)
Q Consensus 194 ps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~ 273 (414)
||+.+|.++.++.++|.++|+|+|++++++|++.+.++.|+.||+++.|+||||+.+|+.|++.++ ++++|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa-~~~~~v~lElgG~ 236 (456)
T cd07145 158 PSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAG-GTGKKVALELGGS 236 (456)
T ss_pred CCccchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHh-hcCCceEEecCCC
Confidence 999999999999999999999999999999977788999999999999999999999999999999 7899999999999
Q ss_pred CceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHH
Q 015020 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR 353 (414)
Q Consensus 274 ~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 353 (414)
||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.++++
T Consensus 237 n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 316 (456)
T cd07145 237 DPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVER 316 (456)
T ss_pred CeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 354 ILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 354 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+.++|++++++|+++++||..+ .|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 317 ~~~~i~~a~~~ga~vl~gg~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 374 (456)
T cd07145 317 MENLVNDAVEKGGKILYGGKRD--EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKD 374 (456)
T ss_pred HHHHHHHHHHCCCEEEeCCCCC--CCeEECCEeecCCCCCChHhhCCCCCceEEEEEECC
Confidence 9999999999999999999763 389999999999999999999999999999999986
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-80 Score=621.77 Aligned_cols=368 Identities=44% Similarity=0.742 Sum_probs=347.6
Q ss_pred eecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhh
Q 015020 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120 (414)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 120 (414)
++||.||+++++++.++.+|++++++.|+++|+ .|+.+|..+|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 78 (456)
T cd07107 1 VINPATGQVLARVPAASAADVDRAVAAARAAFP--EWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAMLG 78 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999999986
Q ss_pred CcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChH
Q 015020 121 GDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200 (414)
Q Consensus 121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~ 200 (414)
|+..+++.++++++......+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 79 -ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~ 157 (456)
T cd07107 79 -DVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPL 157 (456)
T ss_pred -HHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChH
Confidence 9999999999999877666555444333456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcC
Q 015020 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280 (414)
Q Consensus 201 ~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~ 280 (414)
++..+++++.++ +|+|++|+++|++.+.++.|+.||+++.|+||||+.+|+.|++.++ .+++|+++|+|||||+||++
T Consensus 158 ~~~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa-~~~~~~~lElgG~~p~iV~~ 235 (456)
T cd07107 158 SALRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAA-EGIKHVTLELGGKNALIVFP 235 (456)
T ss_pred HHHHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-cCCCeEEEECCCCCeEEECC
Confidence 999999999996 9999999999977678899999999999999999999999999988 78999999999999999999
Q ss_pred CCCHHHHHHHHHHHH-hccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHH
Q 015020 281 DVDVNTAADMALLGI-LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE 359 (414)
Q Consensus 281 dadl~~a~~~i~~~~-~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~ 359 (414)
|||++.|++.+++++ |.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+
T Consensus 236 dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~ 315 (456)
T cd07107 236 DADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYID 315 (456)
T ss_pred CCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHH
Confidence 999999999999995 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEeCCcccC----CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 360 HGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 360 ~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+|+++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~ 373 (456)
T cd07107 316 SAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRD 373 (456)
T ss_pred HHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCC
Confidence 99999999999997532 3589999999999999999999999999999999986
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-79 Score=619.73 Aligned_cols=370 Identities=40% Similarity=0.633 Sum_probs=348.8
Q ss_pred eecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCC-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhh
Q 015020 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP-RFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK 119 (414)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 119 (414)
++||+||+++++++.++.+|++++++.|++||+ .|+ ++|..+|.++|++++++|++++++|++++++|+|||+.++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~ 78 (459)
T cd07089 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFD--TGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTAR 78 (459)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 479999999999999999999999999999999 899 99999999999999999999999999999999999998775
Q ss_pred hCcHHHHHHHHHHHHHHhhhhcCce-eecc----CCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEec
Q 015020 120 MGDIPGAANTLRYYAGAADKIHGEV-LKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194 (414)
Q Consensus 120 ~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkp 194 (414)
..|+..+++.++++++.+++..+.. .+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 79 ~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKp 158 (459)
T cd07089 79 AMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKP 158 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 4599999999999999887654443 2211 2456789999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCC
Q 015020 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 274 (414)
Q Consensus 195 s~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~ 274 (414)
|+.+|.++..+.++|.++|+|+|++++++|++.+.+..|+.||+++.|+||||+.+|+.|++.++ ++++|+++|+||||
T Consensus 159 s~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~n 237 (459)
T cd07089 159 APDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAA-ATLKRVLLELGGKS 237 (459)
T ss_pred CCCChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcCCcEEEECCCCC
Confidence 99999999999999999999999999999977778999999999999999999999999999998 78999999999999
Q ss_pred ceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHH
Q 015020 275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI 354 (414)
Q Consensus 275 ~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~ 354 (414)
|+||++|||++.+++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++
T Consensus 238 ~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v 317 (459)
T cd07089 238 ANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRV 317 (459)
T ss_pred eeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeCCcccC--CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 355 LSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 355 ~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 318 ~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 378 (459)
T cd07089 318 EGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDD 378 (459)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCC
Confidence 9999999999999999997643 3689999999999999999999999999999999985
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-79 Score=618.87 Aligned_cols=377 Identities=53% Similarity=0.877 Sum_probs=353.1
Q ss_pred CeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchh
Q 015020 37 KTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS 116 (414)
Q Consensus 37 ~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 116 (414)
.+++++||+||+++++++.++.++++++++.|++||+++.|+++|..+|.++|+++++.|++++++|++++++|+|||..
T Consensus 2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 81 (462)
T cd07112 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS 81 (462)
T ss_pred CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 46899999999999999999999999999999999973359999999999999999999999999999999999999999
Q ss_pred hhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCC
Q 015020 117 WAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196 (414)
Q Consensus 117 ~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~ 196 (414)
+++..|+..+++.+++++..+++..+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~ 161 (462)
T cd07112 82 DALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAE 161 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCC
Confidence 98644999999999999998877655433333344577899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCce
Q 015020 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL 276 (414)
Q Consensus 197 ~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~ 276 (414)
.+|.++..++++|.++|+|+|++++++|++.+.+..|+.|++++.|+||||+.+|+.|++.++..++||+++|+||+||+
T Consensus 162 ~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~~ 241 (462)
T cd07112 162 QSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPN 241 (462)
T ss_pred CCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCeE
Confidence 99999999999999999999999999997777899999999999999999999999999988834789999999999999
Q ss_pred EEcCCC-CHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHH
Q 015020 277 LIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIL 355 (414)
Q Consensus 277 iV~~da-dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~ 355 (414)
||++|+ |++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|+++++++||++++.+++++.
T Consensus 242 iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~ 321 (462)
T cd07112 242 IVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVL 321 (462)
T ss_pred EECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHH
Confidence 999999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeCCcccC--CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 356 SYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 356 ~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 322 ~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~ 381 (462)
T cd07112 322 GYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDS 381 (462)
T ss_pred HHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCC
Confidence 999999999999999997532 2589999999999999999999999999999999986
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-79 Score=620.68 Aligned_cols=373 Identities=30% Similarity=0.452 Sum_probs=349.0
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCC-ceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 015020 22 TKLFINGEFVDSVSGKTFETIDPRTG-EAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (414)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg-~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (414)
+++||||+|+. ++.+++++||.|+ +++++++.++.+|+++|++.|+++|+ .|+++|..+|.++|++++++|++++
T Consensus 38 ~~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~ 113 (500)
T TIGR01238 38 AAPIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFP--TWNATPAKERAAKLDRLADLLELHM 113 (500)
T ss_pred cCceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHH
Confidence 58999999986 4678999999996 89999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhH
Q 015020 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (414)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 180 (414)
++|++++++|+|||..+++. |+..+++.+++++...+...+ ...++|+|||++|+|||||+...++++
T Consensus 114 ~ela~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~a~~~~~~~~-----------~~~~~P~GVV~~I~pwN~P~~~~~~~i 181 (500)
T TIGR01238 114 PELMALCVREAGKTIHNAIA-EVREAVDFCRYYAKQVRDVLG-----------EFSVESRGVFVCISPWNFPLAIFTGQI 181 (500)
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcC-----------ceeccCcceEEEECCCchHHHHHHHHH
Confidence 99999999999999999986 999999999999987754321 136899999999999999999999999
Q ss_pred hhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHh
Q 015020 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (414)
Q Consensus 181 ~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~ 260 (414)
++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|++.+.++.|+.|++++.|+||||+.+|+.|++.++
T Consensus 182 ~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa- 260 (500)
T TIGR01238 182 SAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLA- 260 (500)
T ss_pred HHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999999976678999999999999999999999999999998
Q ss_pred CCC---cceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCC
Q 015020 261 SNL---KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (414)
Q Consensus 261 ~~~---~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 337 (414)
+++ +|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 261 ~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~~ 340 (500)
T TIGR01238 261 QREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHL 340 (500)
T ss_pred hcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCCC
Confidence 555 79999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCc---ccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK---PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~---~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++|||++++.+++++.++|+++++.|++++.++. ....+|+|++|||+.+ ++|.++++|+||||++|++|++
T Consensus 341 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~~ 417 (500)
T TIGR01238 341 LTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYKA 417 (500)
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeCC
Confidence 999999999999999999999999999999875432 1223699999999973 6889999999999999999973
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-79 Score=620.45 Aligned_cols=369 Identities=48% Similarity=0.795 Sum_probs=348.9
Q ss_pred eecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhh
Q 015020 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120 (414)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 120 (414)
++||+||+++++++.++.++++++++.|++||+ .|+++|.++|.++|+++++.|++++++|++++++|+|||..++..
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 78 (456)
T cd07110 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFP--RWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAW 78 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999999986
Q ss_pred CcHHHHHHHHHHHHHHhhhhcC---ceeecc-CCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCC
Q 015020 121 GDIPGAANTLRYYAGAADKIHG---EVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196 (414)
Q Consensus 121 ~ev~~~~~~l~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~ 196 (414)
|+..+++.+++++..++++.. ...+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 79 -ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~ 157 (456)
T cd07110 79 -DVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSE 157 (456)
T ss_pred -HHHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcc
Confidence 999999999999988876532 222211 345678899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCce
Q 015020 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL 276 (414)
Q Consensus 197 ~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~ 276 (414)
.+|.++..+.++|.++|+|+|++++++|++.+.++.|+.||+++.|+||||+.+|+.|++.++ ++++|+++|+|||||+
T Consensus 158 ~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa-~~~~~~~lElgG~~~~ 236 (456)
T cd07110 158 LTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAA-QDIKPVSLELGGKSPI 236 (456)
T ss_pred cchHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHh-hcCCeEEEEcCCCCee
Confidence 999999999999999999999999999977778999999999999999999999999999998 7899999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHH
Q 015020 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILS 356 (414)
Q Consensus 277 iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~ 356 (414)
||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+
T Consensus 237 iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~ 316 (456)
T cd07110 237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLS 316 (456)
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCEEEeCCcccC--CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 357 YIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 357 ~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++++.+||++++||.... ..|+|+.|||+.+++++|+++++|+||||++|++|++
T Consensus 317 ~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 375 (456)
T cd07110 317 FIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFAT 375 (456)
T ss_pred HHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCC
Confidence 99999999999999997643 4689999999999999999999999999999999985
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-79 Score=619.95 Aligned_cols=369 Identities=53% Similarity=0.888 Sum_probs=350.8
Q ss_pred ecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhC
Q 015020 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG 121 (414)
Q Consensus 42 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ 121 (414)
+||+||+++++++.++.++++++++.|++||+ .|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ 79 (453)
T cd07115 2 LNPATGELIARVAQASAEDVDAAVAAARAAFE--AWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRL 79 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 69999999999999999999999999999999 9999999999999999999999999999999999999999999745
Q ss_pred cHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHH
Q 015020 122 DIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201 (414)
Q Consensus 122 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~ 201 (414)
|+..+++.+++++.++++..+...+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 80 ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~ 159 (453)
T cd07115 80 DVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLS 159 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHH
Confidence 99999999999999887765554443345567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCC
Q 015020 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDD 281 (414)
Q Consensus 202 ~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~d 281 (414)
+..+.++|.++|+|+|++++++|++.+.++.|+.|+++|.|+||||+.+|+.|++.++ .+++|+++|+||+||+||++|
T Consensus 160 ~~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa-~~~~~~~lElgG~~p~iV~~d 238 (453)
T cd07115 160 ALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAA-GNLKRVSLELGGKSANIVFAD 238 (453)
T ss_pred HHHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hcCCeEEEecCCCCceEECCC
Confidence 9999999999999999999999977778899999999999999999999999999998 789999999999999999999
Q ss_pred CCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHH
Q 015020 282 VDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHG 361 (414)
Q Consensus 282 adl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a 361 (414)
||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+++
T Consensus 239 Adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 318 (453)
T cd07115 239 ADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVG 318 (453)
T ss_pred CCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 362 KREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 362 ~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++|+++++||......|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 319 ~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 370 (453)
T cd07115 319 REEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRD 370 (453)
T ss_pred HHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCC
Confidence 9999999999976434689999999999999999999999999999999986
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-79 Score=617.99 Aligned_cols=366 Identities=32% Similarity=0.524 Sum_probs=344.3
Q ss_pred EeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCC-CCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhh
Q 015020 40 ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA 118 (414)
Q Consensus 40 ~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 118 (414)
+++||+||+++++++.++.++++++++.|++||+ . |+.+|..+|.++|+++++.|++++++|++++++|+|||..++
T Consensus 2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 79 (455)
T cd07148 2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFL--DRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDA 79 (455)
T ss_pred CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh--hcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 5789999999999999999999999999999998 6 567999999999999999999999999999999999999999
Q ss_pred hhCcHHHHHHHHHHHHHHhhhhcCceeec-----cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEe
Q 015020 119 KMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193 (414)
Q Consensus 119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlk 193 (414)
+. |+..+++.+++++..+.+..+...+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 80 ~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlK 158 (455)
T cd07148 80 KV-EVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVK 158 (455)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEee
Confidence 86 99999999999998887665443221 1234568899999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCC
Q 015020 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273 (414)
Q Consensus 194 ps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~ 273 (414)
||+.+|.++.+++++|.++|+|+|++++++|++ +.++.|+.||+++.|+||||+.+|+.|++.++ . .+|+++|+|||
T Consensus 159 ps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa-~-~~~~~lElGG~ 235 (455)
T cd07148 159 PALATPLSCLAFVDLLHEAGLPEGWCQAVPCEN-AVAEKLVTDPRVAFFSFIGSARVGWMLRSKLA-P-GTRCALEHGGA 235 (455)
T ss_pred CCCcccHHHHHHHHHHHHcCCCcCcEEEEeCCh-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHhh-c-CCcEEEecCCC
Confidence 999999999999999999999999999999854 67899999999999999999999999999987 5 49999999999
Q ss_pred CceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHH
Q 015020 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR 353 (414)
Q Consensus 274 ~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 353 (414)
||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.++++
T Consensus 236 ~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 315 (455)
T cd07148 236 APVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDR 315 (455)
T ss_pred CceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 354 ILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 354 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+.++|++++++|+++++||... .|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 316 ~~~~i~~a~~~Ga~vl~gg~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 373 (455)
T cd07148 316 VEEWVNEAVAAGARLLCGGKRL--SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDD 373 (455)
T ss_pred HHHHHHHHHhCCCEEEeCCccC--CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCC
Confidence 9999999999999999999764 478999999999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-79 Score=626.31 Aligned_cols=384 Identities=36% Similarity=0.558 Sum_probs=356.6
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 015020 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (414)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (414)
+...|.|.|- .++++++++||+||+++++++.++.+|++++++.|++|++ .|+++|..+|.++|+++++.|+++++
T Consensus 19 ~~~~~~~~~~--~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ 94 (524)
T PRK09407 19 LRRLTARVDG--AAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQR--AWAATPVRERAAVLLRFHDLVLENRE 94 (524)
T ss_pred HHHHHhhcCC--CCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4556777664 4668899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceee-c--cCCccceeeecCCceEEEEcCCchhHHhhHH
Q 015020 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-M--SRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (414)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (414)
+|++++++|+|||..++.. |+..++..+++++..+++..+.... . ......+..++|+|||++|+|||||+...++
T Consensus 95 ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~ 173 (524)
T PRK09407 95 ELLDLVQLETGKARRHAFE-EVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVS 173 (524)
T ss_pred HHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHH
Confidence 9999999999999999986 9999999999999887665433211 1 1124578899999999999999999999999
Q ss_pred hHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHH
Q 015020 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (414)
Q Consensus 179 ~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (414)
++++||++||+||+|||+.+|.++..+++++.++|+|+|++++++|++.+.++.|+.| ++.|+||||+.+|+.|++.+
T Consensus 174 ~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~a 251 (524)
T PRK09407 174 DAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQA 251 (524)
T ss_pred HHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999777788999876 78999999999999999999
Q ss_pred HhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCC
Q 015020 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (414)
Q Consensus 259 ~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~ 338 (414)
+ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++
T Consensus 252 a-~~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~ 330 (524)
T PRK09407 252 G-RRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDY 330 (524)
T ss_pred H-hcCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 8 889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++||++++.+++++.+++++++++||++++||.... ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 331 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~ 406 (524)
T PRK09407 331 SADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVAD 406 (524)
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCC
Confidence 99999999999999999999999999999999997532 2579999999999999999999999999999999985
|
|
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-79 Score=641.94 Aligned_cols=384 Identities=25% Similarity=0.350 Sum_probs=346.6
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhh-cccCCCCCCCHHHHHHHHHHHHHHHH
Q 015020 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA-FDHGPWPRFSGAERRGIMLKFADLIE 97 (414)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (414)
|.+.++||||+|+.+ ++.+++++||.||+++++++.++ +|+++||++|++| |+ .|+++|..+|+++|++++++|+
T Consensus 2 ~~~~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~--~W~~~~~~eR~~~L~~~a~~l~ 77 (675)
T PRK11563 2 MQKLQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGP--ALRALTFHERAAMLKALAKYLL 77 (675)
T ss_pred CccccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhh--hhhcCCHHHHHHHHHHHHHHHH
Confidence 345578999999976 45789999999999999999987 6999999999998 68 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhc--------Cceeecc-CC-ccceeeecCC-ceEEEE
Q 015020 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH--------GEVLKMS-RA-LQGYTLREPI-GVVGHI 166 (414)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~~-~~-~~~~~~~~P~-Gvv~~i 166 (414)
+++++|++ +++|+|||+.+++. |+..+++.+++|+.++++.. ++..+.. .+ ...++.++|+ |||++|
T Consensus 78 ~~~~ela~-l~~e~GK~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I 155 (675)
T PRK11563 78 ERKEELYA-LSAQTGATRRDSWI-DIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHI 155 (675)
T ss_pred HhHHHHHH-HHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEE
Confidence 99999998 59999999999986 99999999999998875532 2222211 11 2257889997 999999
Q ss_pred cCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHhhhCCCcCEEEEe
Q 015020 167 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 245 (414)
Q Consensus 167 ~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~ag-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ft 245 (414)
+|||||++..++++++||++||+||+|||+.+|+++.+|.+++.++| +|+|++|+++|++. ..+..++.++.|+||
T Consensus 156 ~PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~---~~~~~~~~i~~v~FT 232 (675)
T PRK11563 156 NAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAG---DLLDHLDGQDVVTFT 232 (675)
T ss_pred CCCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH---HHhhcCCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999 99999999998532 334444689999999
Q ss_pred cCHHHHHHHHHH--HHhCCCcceeeecCCCCceEEcCCCC-----HHHHHHHHHHHHhccCCCccccCCceEeecchHHH
Q 015020 246 GSTDVGRQVMQA--AATSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318 (414)
Q Consensus 246 Gs~~~g~~i~~~--~~~~~~~~~~~elgG~~~~iV~~dad-----l~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~ 318 (414)
||+++|+.|++. ++ .+++|+++|||||||+||++||| +|.|++.+++++|.|+||.|++++|+|||+++||+
T Consensus 233 GS~~~G~~i~~~~~a~-~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~ 311 (675)
T PRK11563 233 GSAATAQKLRAHPNVV-ANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDA 311 (675)
T ss_pred CcHHHHHHHHhhhhhh-hCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHH
Confidence 999999999985 34 78999999999999999999995 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-------CCCCCeEeeEEEeeCC
Q 015020 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI-------GKKGYYIEPTIFTNVT 391 (414)
Q Consensus 319 f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-------~~~g~~~~Ptvl~~~~ 391 (414)
|+++|+++++++++|+|.++++++|||+++.+++++.++|++|+++ |++++||... ..+|+|++||||.+++
T Consensus 312 f~~~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~ 390 (675)
T PRK11563 312 VIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDD 390 (675)
T ss_pred HHHHHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccC
Confidence 9999999999999999999999999999999999999999999999 9999999631 1358999999999999
Q ss_pred C--CCcccccccccceeeEEEEec
Q 015020 392 E--DMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 392 ~--~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+ ++++++||+||||++|++|++
T Consensus 391 ~~~~~~i~~eEiFGPVl~V~~~~~ 414 (675)
T PRK11563 391 PLEAPAVHDVEAFGPVSTLMPYDD 414 (675)
T ss_pred chhhhhHhhccccCCceEEEecCC
Confidence 8 579999999999999999986
|
|
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-79 Score=618.58 Aligned_cols=368 Identities=39% Similarity=0.660 Sum_probs=350.6
Q ss_pred EEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhh
Q 015020 39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA 118 (414)
Q Consensus 39 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 118 (414)
++++||+||+++++++.++.++++++++.|++|++ .|+.++..+|.++|+++++.|++++++|++++++|+|||+.++
T Consensus 1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 78 (451)
T cd07150 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFP--AWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKA 78 (451)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH
Confidence 35789999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred hhCcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCC
Q 015020 119 KMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197 (414)
Q Consensus 119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~ 197 (414)
+. |+..+++.+++++.++++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 79 ~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~ 157 (451)
T cd07150 79 WF-ETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEE 157 (451)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCcc
Confidence 86 999999999999998877655444332 4456789999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceE
Q 015020 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (414)
Q Consensus 198 ~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~i 277 (414)
+|.++..+.++|.++|+|+|++++++|++.+.+..|+.|++++.|+||||+.+|+.|++.++ ++++|+++|+|||||+|
T Consensus 158 ~p~t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa-~~~~~~~lelGG~~~~i 236 (451)
T cd07150 158 TPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAG-RHLKKITLELGGKNPLI 236 (451)
T ss_pred CcHHHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hcCCceEeecCCCCeeE
Confidence 99999999999999999999999999977778999999999999999999999999999998 78999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHH
Q 015020 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357 (414)
Q Consensus 278 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~ 357 (414)
|++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++
T Consensus 237 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~ 316 (451)
T cd07150 237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQ 316 (451)
T ss_pred ECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 358 IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 358 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
|++++.+|+++++||.. +|+|++||||.+++++|+++++|+||||++|++|++
T Consensus 317 i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 369 (451)
T cd07150 317 VEDAVAKGAKLLTGGKY---DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKD 369 (451)
T ss_pred HHHHHhCCCEEEeCCcc---CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCC
Confidence 99999999999999964 489999999999999999999999999999999986
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-79 Score=622.65 Aligned_cols=382 Identities=34% Similarity=0.485 Sum_probs=356.7
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 015020 22 TKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (414)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (414)
.-.||+|+|.. ++++++++||+| |+++++++.++.+|++++++.|++|++ .|+.++..+|.++|+++++.|++++
T Consensus 33 ~~p~i~g~~~~--~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 108 (518)
T cd07125 33 AIPIINGEETE--TGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFA--GWSATPVEERAEILEKAADLLEANR 108 (518)
T ss_pred cCceECCEEee--CCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 44689999983 568999999999 999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCce-eeccCCccceeeecCCceEEEEcCCchhHHhhHHh
Q 015020 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (414)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (414)
++|++++++|+|||+.+++. |+..+++.+++++..+++..+.. .+...+...+++++|+|||++|+|||||+...+++
T Consensus 109 ~~la~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~ 187 (518)
T cd07125 109 GELIALAAAEAGKTLADADA-EVREAIDFCRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQ 187 (518)
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCceeEEEEecccEEEEECCcchHHHHHHHH
Confidence 99999999999999999986 99999999999998887654332 23333556789999999999999999999999999
Q ss_pred HhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHH
Q 015020 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (414)
Q Consensus 180 l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (414)
+++||++||+||+|||+.+|+++.++++++.++|+|+|++++++|++.+.+..|+.|++++.|+||||+.+|+.|++.++
T Consensus 188 i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa 267 (518)
T cd07125 188 IAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALA 267 (518)
T ss_pred HHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999976668999999999999999999999999999877
Q ss_pred hCC---CcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCC
Q 015020 260 TSN---LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (414)
Q Consensus 260 ~~~---~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~ 336 (414)
++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++.++++|+|.
T Consensus 268 -~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~ 346 (518)
T cd07125 268 -ERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPW 346 (518)
T ss_pred -hccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCC
Confidence 33 79999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEe
Q 015020 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (414)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (414)
++++++||++++.+++++.++|+++++ ++++++||......|+|++|||+.++ +|++++||+||||++|++|+
T Consensus 347 ~~~~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~ 419 (518)
T cd07125 347 DLSTDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFK 419 (518)
T ss_pred CCCCCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeC
Confidence 999999999999999999999999987 46899998753236999999999888 89999999999999999998
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-79 Score=616.99 Aligned_cols=368 Identities=47% Similarity=0.781 Sum_probs=347.9
Q ss_pred eecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCC-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhh
Q 015020 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP-RFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK 119 (414)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 119 (414)
++||+||+++++++.++.+|++++++.|++|++ .|. .+|.++|.++|+++++.|++++++|++++++|+|||..+++
T Consensus 1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~--~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 78 (454)
T cd07109 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFE--SGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQAR 78 (454)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH
Confidence 479999999999999999999999999999998 776 99999999999999999999999999999999999999998
Q ss_pred hCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCCh
Q 015020 120 MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199 (414)
Q Consensus 120 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~ 199 (414)
. |+..+++.+++++++.++..+...+...+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|
T Consensus 79 ~-ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p 157 (454)
T cd07109 79 A-DVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAP 157 (454)
T ss_pred H-HHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence 6 999999999999988777655444433455678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEc
Q 015020 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF 279 (414)
Q Consensus 200 ~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~ 279 (414)
.++..+.++|.++|+|+|++|+++|.+.+.++.|+.|++++.|+||||+.+|+.|++.++ ++++|+++|+|||||+||+
T Consensus 158 ~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa-~~~~p~~lElgG~~~~iV~ 236 (454)
T cd07109 158 LTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAA-ENVVPVTLELGGKSPQIVF 236 (454)
T ss_pred HHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHh-hcCCcEEEECCCCCceEEC
Confidence 999999999999999999999999977778999999999999999999999999999988 7899999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHH
Q 015020 280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE 359 (414)
Q Consensus 280 ~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~ 359 (414)
+|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.+ .+++||++++++++++.++|+
T Consensus 237 ~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~ 315 (454)
T cd07109 237 ADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVA 315 (454)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999986 689999999999999999999
Q ss_pred HHHHcCCEEEeCCcccC---CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 360 HGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 360 ~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 316 ~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~ 372 (454)
T cd07109 316 RARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDD 372 (454)
T ss_pred HHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCC
Confidence 99999999999987532 3589999999999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-79 Score=617.17 Aligned_cols=368 Identities=44% Similarity=0.764 Sum_probs=349.1
Q ss_pred eecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhh
Q 015020 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120 (414)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 120 (414)
++||+||+++++++.++.++++++++.|+++++ .|+++|..+|.++|+++++.|.+++++|++++++|+|||..+++.
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 78 (457)
T cd07090 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQK--EWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEARV 78 (457)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999999986
Q ss_pred CcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChH
Q 015020 121 GDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200 (414)
Q Consensus 121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~ 200 (414)
|+..+++.+++++++.+...+...+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 79 -ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~ 157 (457)
T cd07090 79 -DIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPL 157 (457)
T ss_pred -HHHHHHHHHHHHHHHHHHhCCeeeccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcH
Confidence 9999999999999888776554443333556788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcC
Q 015020 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280 (414)
Q Consensus 201 ~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~ 280 (414)
++..+.++|.++|+|+|++|+++|++ +.++.|+.|++++.|+||||+.+|+.|++.++ ++++|+++|+|||||+||++
T Consensus 158 ~~~~l~~~~~~aGlP~g~~~~v~g~~-~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa-~~~~~~~lelgG~~p~iV~~ 235 (457)
T cd07090 158 TALLLAEILTEAGLPDGVFNVVQGGG-ETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAA-KGIKHVTLELGGKSPLIIFD 235 (457)
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCh-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-ccCCceEEecCCCCceEECC
Confidence 99999999999999999999999855 58899999999999999999999999999998 78999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHH
Q 015020 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH 360 (414)
Q Consensus 281 dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~ 360 (414)
|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.++|++
T Consensus 236 dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 315 (457)
T cd07090 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIES 315 (457)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEeCCcccC-----CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 361 GKREGATLLTGGKPIG-----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 361 a~~~Ga~v~~gg~~~~-----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++|+++++||.... .+|+|++|||+.+++++|+++++|+||||++|++|++
T Consensus 316 a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~ 373 (457)
T cd07090 316 AKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDT 373 (457)
T ss_pred HHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECC
Confidence 9999999999997531 2589999999999999999999999999999999986
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-78 Score=613.62 Aligned_cols=383 Identities=35% Similarity=0.506 Sum_probs=360.8
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCC-CHHHHHHHHHHHHHHHHHhH
Q 015020 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRF-SGAERRGIMLKFADLIEEHA 100 (414)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~-~~~~R~~~L~~~a~~l~~~~ 100 (414)
+++||||+|+.+. +++++++||+||+++++++.++.+|+++++++|++|++ .|+++ +..+|.++|+++++.|.+++
T Consensus 2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~~R~~~L~~~a~~l~~~~ 78 (473)
T cd07082 2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGR--GWWPTMPLEERIDCLHKFADLLKENK 78 (473)
T ss_pred CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhcCCHHHHHHHHHHHHHHHHHHH
Confidence 4579999999864 67899999999999999999999999999999999999 99998 99999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-----CCccceeeecCCceEEEEcCCchhHHh
Q 015020 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTM 175 (414)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (414)
++|++++++|+|||..++.. |+..+++.++++++..+.+.+...+.. .+...++.++|+|||++|+|||||+..
T Consensus 79 ~el~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~ 157 (473)
T cd07082 79 EEVANLLMWEIGKTLKDALK-EVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNL 157 (473)
T ss_pred HHHHHHHHHHcCCcHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHH
Confidence 99999999999999999986 999999999999988876644433211 244568899999999999999999999
Q ss_pred hHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHH
Q 015020 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (414)
Q Consensus 176 ~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (414)
.++++++||++||+||+|||+.+|.++.++.++|.++|+|+|++++++|++.+.++.|..|++++.|+||||+.+|+.|+
T Consensus 158 ~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 237 (473)
T cd07082 158 TVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLK 237 (473)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998777899999999999999999999999999
Q ss_pred HHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCC
Q 015020 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (414)
Q Consensus 256 ~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 335 (414)
+.++ ++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++++++|+|
T Consensus 238 ~~a~---~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~ 314 (473)
T cd07082 238 KQHP---MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMP 314 (473)
T ss_pred HHhC---CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCC
Confidence 8875 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
.++++++||++++.+++++.+++++++++|+++++||... .|+|+.|||+.+++++|+++++|+||||++|++|++
T Consensus 315 ~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~ 390 (473)
T cd07082 315 WDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE--GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVND 390 (473)
T ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCC
Confidence 9999999999999999999999999999999999999763 489999999999999999999999999999999985
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-78 Score=612.50 Aligned_cols=371 Identities=47% Similarity=0.803 Sum_probs=349.3
Q ss_pred eecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhh
Q 015020 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120 (414)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 120 (414)
++||+||+++++++.++.++++++++.|++|++++.|+.+|..+|.++|++++++|.+++++|++++++|+|||..+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 80 (457)
T cd07114 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 47999999999999999999999999999999733599999999999999999999999999999999999999999986
Q ss_pred CcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCCh
Q 015020 121 GDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199 (414)
Q Consensus 121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~ 199 (414)
|+..+++.+++++.+.+...+...+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 81 -ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p 159 (457)
T cd07114 81 -QVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTP 159 (457)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccch
Confidence 999999999999988766544433322 345578899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEc
Q 015020 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF 279 (414)
Q Consensus 200 ~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~ 279 (414)
.++..|+++|.++|+|+|++++++|++.+.+..|+.|++++.|+||||+.+|+.|++.++ ++++|+++|+||+||+||+
T Consensus 160 ~~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~ 238 (457)
T cd07114 160 ASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAA-ENLAPVTLELGGKSPNIVF 238 (457)
T ss_pred HHHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCeEEEecCCCCeeEEC
Confidence 999999999999999999999999977678899999999999999999999999999998 7899999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHH
Q 015020 280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE 359 (414)
Q Consensus 280 ~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~ 359 (414)
+|||++.|++.+++++|.|+||.|+++++||||++++++|+++|+++++++++|+|.++++++|||+++.+++++.++|+
T Consensus 239 ~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~ 318 (457)
T cd07114 239 DDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVA 318 (457)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEeCCcccC----CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 360 HGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 360 ~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++++|+++++||.... ..|+|++|||+.+++++++++++|+||||++|++|++
T Consensus 319 ~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 376 (457)
T cd07114 319 RAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDD 376 (457)
T ss_pred HHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCC
Confidence 99999999999997642 3589999999999999999999999999999999986
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-78 Score=611.69 Aligned_cols=366 Identities=36% Similarity=0.585 Sum_probs=343.3
Q ss_pred ecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhC
Q 015020 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG 121 (414)
Q Consensus 42 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ 121 (414)
.||+||+++++++.++.+|++++++.|++||+ .|+++|..+|.++|++++++|++++++|++++++|+|||..++..
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~- 77 (454)
T cd07101 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQR--AWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAFE- 77 (454)
T ss_pred CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHH-
Confidence 38999999999999999999999999999999 999999999999999999999999999999999999999999986
Q ss_pred cHHHHHHHHHHHHHHhhhhcCcee-ec--cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCC
Q 015020 122 DIPGAANTLRYYAGAADKIHGEVL-KM--SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 198 (414)
Q Consensus 122 ev~~~~~~l~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~ 198 (414)
|+..+++.+++++..+.+...... +. ......+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 78 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~ 157 (454)
T cd07101 78 EVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQT 157 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccc
Confidence 999999999999988766543321 11 112456889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEE
Q 015020 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278 (414)
Q Consensus 199 ~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV 278 (414)
|.++..+.+++.++|+|+|++|+++|++.+.+..|++| ++.|+||||+.+|+.|++.++ .+++|+++|+|||||+||
T Consensus 158 p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa-~~~~~~~lElgG~~p~iV 234 (454)
T cd07101 158 ALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAG-RRLIGCSLELGGKNPMIV 234 (454)
T ss_pred hHHHHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHH-hcCCcEEEECCCCceEEE
Confidence 99999999999999999999999999877888999876 578999999999999999998 789999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHH
Q 015020 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYI 358 (414)
Q Consensus 279 ~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i 358 (414)
++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++|
T Consensus 235 ~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v 314 (454)
T cd07101 235 LEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHV 314 (454)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEeCCcccC-CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 359 EHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 359 ~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 315 ~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~ 370 (454)
T cd07101 315 DDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVAD 370 (454)
T ss_pred HHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCC
Confidence 999999999999997532 2579999999999999999999999999999999986
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-78 Score=607.28 Aligned_cols=374 Identities=23% Similarity=0.305 Sum_probs=339.4
Q ss_pred eeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCC--CCCCHHHH----HHHHHHHHHHHH
Q 015020 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW--PRFSGAER----RGIMLKFADLIE 97 (414)
Q Consensus 24 ~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w--~~~~~~~R----~~~L~~~a~~l~ 97 (414)
+||||+|+.+ +++++++||+||+++++++.++.+|+++|+++|++||+ .| +.++..+| .++|+++++.|+
T Consensus 1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~~~R~l~~~~il~~~a~~l~ 76 (489)
T cd07126 1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPK--SGLHNPLKNPERYLLYGDVSHRVAHELR 76 (489)
T ss_pred CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hccccCCCHHHHhhhHHHHHHHHHHHHH
Confidence 4799999874 47899999999999999999999999999999999999 77 66889999 899999999999
Q ss_pred Hh--HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCcee--ec-cCCccceeeecCCceEEEEcCCchh
Q 015020 98 EH--AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL--KM-SRALQGYTLREPIGVVGHIIPWNFP 172 (414)
Q Consensus 98 ~~--~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~P~Gvv~~i~p~n~P 172 (414)
++ .++|++++++|+|||+.+++. |+..+++.+++|++...+..+... +. ..+...+++++|+|||++|+|||||
T Consensus 77 ~~~~~~~la~~~~~e~GK~~~~a~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP 155 (489)
T cd07126 77 KPEVEDFFARLIQRVAPKSDAQALG-EVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFP 155 (489)
T ss_pred cCCCHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchH
Confidence 98 599999999999999999986 999999999999988766554432 21 1345678999999999999999999
Q ss_pred HHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHH
Q 015020 173 TTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252 (414)
Q Consensus 173 ~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~ 252 (414)
+.+.++++++||++||+||+|||+.+|+++.+|.+++.++|+|+|++|+++|++.+ +..++.|++++.|+||||+.+|+
T Consensus 156 ~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~~vGr 234 (489)
T cd07126 156 LEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSSKVAE 234 (489)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999999999999999999996654 55688899999999999999999
Q ss_pred HHHHHHHhCCCcceeeecCCCCceEEcCCC-CHHHHHHHHHHHHhccCCCccccCCceEeecch-HHHHHHHHHHHHhcc
Q 015020 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAW 330 (414)
Q Consensus 253 ~i~~~~~~~~~~~~~~elgG~~~~iV~~da-dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~~~f~~~l~~~~~~~ 330 (414)
.|...++ +++.+|+||+||+||++|| |+|.+++.+++++|.|+||.|++++|+|||+++ +|+|+++|++.++++
T Consensus 235 ~i~~~~g----~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~ 310 (489)
T cd07126 235 RLALELH----GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQR 310 (489)
T ss_pred HHHHHhC----CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhc
Confidence 9988776 5799999999999999999 999999999999999999999999999999995 689999999999999
Q ss_pred ccCCCCCCCCCccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCcccCC----CC-CeEeeEEEee------CCCCCcccc
Q 015020 331 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGKPIGK----KG-YYIEPTIFTN------VTEDMLIAK 398 (414)
Q Consensus 331 ~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~----~g-~~~~Ptvl~~------~~~~~~i~~ 398 (414)
++|+ +++||+++.. .+++.++|+++++ +||++++||..... .| .|++||||.. ++++|++++
T Consensus 311 ~~g~-----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~ 384 (489)
T cd07126 311 KLED-----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVT 384 (489)
T ss_pred ccCC-----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHh
Confidence 9875 5899999998 8999999999998 99999999976422 23 3899999942 678999999
Q ss_pred cccccceeeEEEEec
Q 015020 399 NEIFGPVMALMKFKI 413 (414)
Q Consensus 399 ~E~fgPv~~v~~~~~ 413 (414)
||+||||++|++|++
T Consensus 385 eEiFGPVl~V~~~~~ 399 (489)
T cd07126 385 TEVFGPFQVVTEYKD 399 (489)
T ss_pred CCCcCCEEEEEEECC
Confidence 999999999999986
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-78 Score=610.16 Aligned_cols=365 Identities=42% Similarity=0.680 Sum_probs=344.1
Q ss_pred eecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhh
Q 015020 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120 (414)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 120 (414)
++||+||+++++++.++.+|++++++.|++||+ .|++++..+|.++|+++++.|.+++++|++++++|+|||..+++.
T Consensus 1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 78 (446)
T cd07106 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFP--GWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQF 78 (446)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999999986
Q ss_pred CcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChH
Q 015020 121 GDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200 (414)
Q Consensus 121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~ 200 (414)
|+..+++.+++++.... .+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 79 -ev~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~ 155 (446)
T cd07106 79 -EVGGAVAWLRYTASLDL--PDEVIEDDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPL 155 (446)
T ss_pred -HHHHHHHHHHHHHhhhh--cCccccCCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence 99999999999987763 122222223456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcC
Q 015020 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280 (414)
Q Consensus 201 ~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~ 280 (414)
++.+++++|.++ +|+|++++++|+ .+.+..|++|++++.|+||||+.+|+.|++.++ ++++|+++|+|||||+||++
T Consensus 156 ~~~~l~~~~~~~-lP~g~~~~v~g~-~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa-~~~~~~~lElGG~~p~iV~~ 232 (446)
T cd07106 156 CTLKLGELAQEV-LPPGVLNVVSGG-DELGPALTSHPDIRKISFTGSTATGKKVMASAA-KTLKRVTLELGGNDAAIVLP 232 (446)
T ss_pred HHHHHHHHHHHh-CCcCeEEEeeCC-hhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCeeEEecCCCCeeEECC
Confidence 999999999996 999999999984 468899999999999999999999999999998 88999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHH
Q 015020 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH 360 (414)
Q Consensus 281 dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~ 360 (414)
|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++
T Consensus 233 dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~ 312 (446)
T cd07106 233 DVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVED 312 (446)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 361 GKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 361 a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++.+|+++++||......|+|++|||+.+++++|+++++|+||||++|++|++
T Consensus 313 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~ 365 (446)
T cd07106 313 AKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSD 365 (446)
T ss_pred HHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCC
Confidence 99999999999986544689999999999999999999999999999999985
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-78 Score=607.88 Aligned_cols=349 Identities=24% Similarity=0.377 Sum_probs=323.1
Q ss_pred CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHH
Q 015020 56 GDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135 (414)
Q Consensus 56 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~ 135 (414)
....|+++++++|+++|+ .|+.+|..+|.++|+++++.|++|+++|++++++|+|||..++...|+..+++.++|+++
T Consensus 7 ~~~~~v~~av~~a~~af~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~ 84 (484)
T PLN02174 7 FGAADASILVTELRRSFD--DGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALK 84 (484)
T ss_pred cCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999 899999999999999999999999999999999999999999875599999999999999
Q ss_pred HhhhhcC----ceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHH
Q 015020 136 AADKIHG----EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 211 (414)
Q Consensus 136 ~~~~~~~----~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~ 211 (414)
.+++..+ .......+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++++++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~ 164 (484)
T PLN02174 85 QLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ 164 (484)
T ss_pred HHHHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 8775543 111112234578999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHH
Q 015020 212 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 291 (414)
Q Consensus 212 aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i 291 (414)
++|+|++|+++|++ +.+..|+. +++|.|+||||+.+|+.|++.++ ++++|+++|||||||+||++|||++.|++.+
T Consensus 165 -~lp~gvv~vv~G~~-~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa-~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i 240 (484)
T PLN02174 165 -YLDSSAVRVVEGAV-TETTALLE-QKWDKIFYTGSSKIGRVIMAAAA-KHLTPVVLELGGKSPVVVDSDTDLKVTVRRI 240 (484)
T ss_pred -hCCCCEEEEEECCh-HHHHHHhc-ccCCEEEEECChHHHHHHHHHHH-hcCCcEEEecCCCCeEEEcCCCCHHHHHHHH
Confidence 69999999999844 45677775 89999999999999999999999 8999999999999999999999999999999
Q ss_pred HHHHh-ccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEe
Q 015020 292 LLGIL-FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 370 (414)
Q Consensus 292 ~~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~ 370 (414)
++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++ .+|+++++
T Consensus 241 ~~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~ 318 (484)
T PLN02174 241 IAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVY 318 (484)
T ss_pred HHHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEE
Confidence 99999 69999999999999999999999999999999999999987 78999999999999999999998 78999999
Q ss_pred CCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 371 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 371 gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
||... ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 319 GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 360 (484)
T PLN02174 319 GGEKD-RENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNN 360 (484)
T ss_pred CCCcC-CCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCC
Confidence 99753 4689999999999999999999999999999999986
|
|
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-78 Score=608.13 Aligned_cols=368 Identities=43% Similarity=0.758 Sum_probs=346.7
Q ss_pred eecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCch-hhhh
Q 015020 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH-SWAK 119 (414)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~-~~a~ 119 (414)
++||+||+++++++.++.+|+++++++|+++|+ .|+.+|..+|.++|+++++.|++++++|++++++|+|||. .+++
T Consensus 1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~ 78 (457)
T cd07108 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFP--EWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQAR 78 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHH
Confidence 579999999999999999999999999999999 9999999999999999999999999999999999999997 6887
Q ss_pred hCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCCh
Q 015020 120 MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199 (414)
Q Consensus 120 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~ 199 (414)
. |+..+++.+++++.+.....+...+...+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|
T Consensus 79 ~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p 157 (457)
T cd07108 79 P-EAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAP 157 (457)
T ss_pred H-HHHHHHHHHHHHHHHHHHhCCceeccCCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCc
Confidence 5 999999999999988766655544433445567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEc
Q 015020 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF 279 (414)
Q Consensus 200 ~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~ 279 (414)
.++.++.+++.++ +|+|++++++|++.+.++.|+.|+++|.|+||||+.+|+.|++.++ ++++|+++|+|||||+||+
T Consensus 158 ~~~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa-~~l~~~~lelgG~~~~iV~ 235 (457)
T cd07108 158 LAVLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAA-DRLIPVSLELGGKSPMIVF 235 (457)
T ss_pred HHHHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHh-ccCCeEEEECCCCCeeEEC
Confidence 9999999999986 9999999999977778899999999999999999999999999998 7899999999999999999
Q ss_pred CCCCHHHHHHHHHHH-HhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHH
Q 015020 280 DDVDVNTAADMALLG-ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYI 358 (414)
Q Consensus 280 ~dadl~~a~~~i~~~-~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i 358 (414)
+|||++.|++.++++ +|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|
T Consensus 236 ~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i 315 (457)
T cd07108 236 PDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYI 315 (457)
T ss_pred CCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 999999999999999 5999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-cCCEEEeCCcccC----CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 359 EHGKR-EGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 359 ~~a~~-~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++++ +|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 316 ~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 375 (457)
T cd07108 316 DLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKD 375 (457)
T ss_pred HHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCC
Confidence 99998 9999999997631 3589999999999999999999999999999999986
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-77 Score=606.97 Aligned_cols=367 Identities=35% Similarity=0.551 Sum_probs=347.2
Q ss_pred ecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhC
Q 015020 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG 121 (414)
Q Consensus 42 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ 121 (414)
+||+||+++++++.++.+|++++++.|++|++ .|+.++..+|.++|++++++|++++++|++++++|+|||..+++.
T Consensus 1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~- 77 (452)
T cd07102 1 ISPIDGSVIAERPLASLEAVRAALERARAAQK--GWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAGG- 77 (452)
T ss_pred CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHH-
Confidence 58999999999999999999999999999999 999999999999999999999999999999999999999999986
Q ss_pred cHHHHHHHHHHHHHHhhhhcCce-eeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChH
Q 015020 122 DIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200 (414)
Q Consensus 122 ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~ 200 (414)
|+...++.+++++..+++..+.. .+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 78 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~ 157 (452)
T cd07102 78 EIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPL 157 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcH
Confidence 99999999999998877654432 22234455788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcC
Q 015020 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280 (414)
Q Consensus 201 ~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~ 280 (414)
++..|.++|.++|+|+|++|+++|++ +.+..|+.|++++.|.||||+.+|+.|++.++ ++++|+.+|+|||||+||++
T Consensus 158 ~~~~l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~-~~~~~v~lelgG~~~~iV~~ 235 (452)
T cd07102 158 CGERFAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGSVAGGRAIQRAAA-GRFIKVGLELGGKDPAYVRP 235 (452)
T ss_pred HHHHHHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcCCcEEEECCCCCceEEcC
Confidence 99999999999999999999999966 78999999999999999999999999999988 88999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHH
Q 015020 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH 360 (414)
Q Consensus 281 dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~ 360 (414)
|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.++++++||++++.+++++.++|++
T Consensus 236 dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~ 315 (452)
T cd07102 236 DADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIAD 315 (452)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEeCCccc---CCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 361 GKREGATLLTGGKPI---GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 361 a~~~Ga~v~~gg~~~---~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++|+++++||... +.+|+|++|||+.+++++|+++++|+||||++|++|++
T Consensus 316 a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 371 (452)
T cd07102 316 AIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKS 371 (452)
T ss_pred HHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCC
Confidence 999999999999753 23689999999999999999999999999999999986
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-77 Score=606.54 Aligned_cols=365 Identities=35% Similarity=0.624 Sum_probs=346.3
Q ss_pred EeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhh
Q 015020 40 ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK 119 (414)
Q Consensus 40 ~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 119 (414)
+++||+||+++++++.++.+|++++++.|++|++ .|+++|..+|.++|+++++.|.+++++|++++++|+|||..+++
T Consensus 2 ~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 79 (453)
T cd07094 2 DVHNPYDGEVIGKVPADDRADAEEALATARAGAE--NRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDAR 79 (453)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH
Confidence 5789999999999999999999999999999999 99999999999999999999999999999999999999999998
Q ss_pred hCcHHHHHHHHHHHHHHhhhhcCceeecc-----CCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEec
Q 015020 120 MGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194 (414)
Q Consensus 120 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkp 194 (414)
. |+..+++.+++++..+++..++..+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 80 ~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kp 158 (453)
T cd07094 80 V-EVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKP 158 (453)
T ss_pred H-HHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEEC
Confidence 6 999999999999988877655433322 2445678899999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCC
Q 015020 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 274 (414)
Q Consensus 195 s~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~ 274 (414)
|+.+|+++..+++++.++|+|+|++++++|++.++++.|+.||+++.|+||||+.+|+.|++.+ .++|+++|+||||
T Consensus 159 s~~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a---~~~~~~lelGGk~ 235 (453)
T cd07094 159 ASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA---GGKRIALELGGNA 235 (453)
T ss_pred CCcchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc---CCCceEEecCCCC
Confidence 9999999999999999999999999999997777899999999999999999999999999987 4799999999999
Q ss_pred ceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHH
Q 015020 275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI 354 (414)
Q Consensus 275 ~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~ 354 (414)
|+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++
T Consensus 236 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 315 (453)
T cd07094 236 PVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERV 315 (453)
T ss_pred ceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 355 LSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 355 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
.++|++|+++|+++++||.. .|+|++|||+.+++++|+++++|+||||++|++|++
T Consensus 316 ~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~ 371 (453)
T cd07094 316 ERWVEEAVEAGARLLCGGER---DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDD 371 (453)
T ss_pred HHHHHHHHHCCCEEEeCccC---CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCC
Confidence 99999999999999999864 588999999999999999999999999999999985
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-77 Score=605.85 Aligned_cols=366 Identities=36% Similarity=0.581 Sum_probs=345.0
Q ss_pred ecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhC
Q 015020 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG 121 (414)
Q Consensus 42 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ 121 (414)
+||+||+++++++.++.++++++++.|+++++ .|++++..+|.++|+++++.|++++++|++++++|+|||..++..
T Consensus 1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~- 77 (453)
T cd07099 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQR--AWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAGL- 77 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-
Confidence 48999999999999999999999999999999 999999999999999999999999999999999999999998886
Q ss_pred cHHHHHHHHHHHHHHhhhhcCce-eec---cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCC
Q 015020 122 DIPGAANTLRYYAGAADKIHGEV-LKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197 (414)
Q Consensus 122 ev~~~~~~l~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~ 197 (414)
|+..+++.+++++..+.+..+.. .+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 78 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~ 157 (453)
T cd07099 78 EVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEV 157 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCcc
Confidence 99999999999998877654332 221 13456788999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceE
Q 015020 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (414)
Q Consensus 198 ~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~i 277 (414)
+|.++..|.++|.++|+|+|++++++|++ +.+..|++| .+|.|+||||+.+|+.|++.++ ++++|+++|+|||||+|
T Consensus 158 ~p~~~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa-~~~~~~~lelgG~~p~i 234 (453)
T cd07099 158 TPLVGELLAEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAFTGSVATGRKVMAAAA-ERLIPVVLELGGKDPMI 234 (453)
T ss_pred chHHHHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEEECCHHHHHHHHHHHH-hcCCeEEEECCCCCeEE
Confidence 99999999999999999999999999966 688889887 5999999999999999999998 78999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHH
Q 015020 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357 (414)
Q Consensus 278 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~ 357 (414)
|++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++
T Consensus 235 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~ 314 (453)
T cd07099 235 VLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRH 314 (453)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 358 IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 358 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
|++++++|+++++||.....+|+|++|||+.+++++|+++++|+||||++|++|++
T Consensus 315 i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~ 370 (453)
T cd07099 315 VDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVAD 370 (453)
T ss_pred HHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCC
Confidence 99999999999999976434689999999999999999999999999999999986
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-77 Score=605.49 Aligned_cols=368 Identities=43% Similarity=0.699 Sum_probs=345.4
Q ss_pred eecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhh
Q 015020 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120 (414)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 120 (414)
++||+||+++++++.++.+|++++++.|++|++ .|+.+|..+|.++|+++++.|.+++++|++++++|+|||..++..
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 78 (450)
T cd07092 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFP--SWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRD 78 (450)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999987654
Q ss_pred CcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCCh
Q 015020 121 GDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199 (414)
Q Consensus 121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~ 199 (414)
.|+..+++.+++++...+...+...+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 79 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~ 158 (450)
T cd07092 79 DELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTP 158 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccch
Confidence 499999999999998776554432211 1234567899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEc
Q 015020 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF 279 (414)
Q Consensus 200 ~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~ 279 (414)
.++.+|.++|.+ |+|+|++++++|++.+.++.|+.|++++.|+||||+.+|+.|++.++ ++++|+++|+|||||+||+
T Consensus 159 ~~~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~-~~~~~~~lelgG~~p~iV~ 236 (450)
T cd07092 159 LTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAA-DTLKRVHLELGGKAPVIVF 236 (450)
T ss_pred HHHHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hcCCcEEEECCCCCeeEEC
Confidence 999999999999 99999999999977678899999999999999999999999999999 7899999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHH
Q 015020 280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE 359 (414)
Q Consensus 280 ~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~ 359 (414)
+|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+
T Consensus 237 ~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~ 316 (450)
T cd07092 237 DDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVE 316 (450)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 360 HGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 360 ~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++. +|+++++||......|+|++|||+.+++++|+++++|+||||++|++|++
T Consensus 317 ~a~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 369 (450)
T cd07092 317 RAP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDD 369 (450)
T ss_pred HHH-cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECC
Confidence 998 99999999986545689999999999999999999999999999999986
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-77 Score=604.43 Aligned_cols=369 Identities=43% Similarity=0.749 Sum_probs=350.1
Q ss_pred eecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhh
Q 015020 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120 (414)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 120 (414)
++||+||+++++++.++.++++++++.|+++++ .|+.+|..+|.++|+++++.|.+++++|++++++|+|||..+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 78 (451)
T cd07103 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFK--TWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARG 78 (451)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999999986
Q ss_pred CcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCCh
Q 015020 121 GDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199 (414)
Q Consensus 121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~ 199 (414)
|+..+++.+++++..+++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 79 -ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~ 157 (451)
T cd07103 79 -EVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETP 157 (451)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCc
Confidence 999999999999888776555443322 355678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEc
Q 015020 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF 279 (414)
Q Consensus 200 ~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~ 279 (414)
.++..+.++|.++|+|+|+++++++++.+.++.|..|+++|.|+||||+.+|+.|.+.++ ++++|+++|+|||||+||+
T Consensus 158 ~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~ 236 (451)
T cd07103 158 LSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAA-DTVKRVSLELGGNAPFIVF 236 (451)
T ss_pred HHHHHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCcEEEECCCCCeEEEC
Confidence 999999999999999999999999977678899999999999999999999999999998 7899999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHH
Q 015020 280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE 359 (414)
Q Consensus 280 ~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~ 359 (414)
+|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++
T Consensus 237 ~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~ 316 (451)
T cd07103 237 DDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVE 316 (451)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 360 HGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 360 ~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++.+|+++++||.....+|+|++|||+.+++++++++++|+||||++|++|++
T Consensus 317 ~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~ 370 (451)
T cd07103 317 DAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDT 370 (451)
T ss_pred HHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECC
Confidence 999999999999976544689999999999999999999999999999999986
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-77 Score=604.54 Aligned_cols=365 Identities=37% Similarity=0.614 Sum_probs=343.2
Q ss_pred EEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhh
Q 015020 39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA 118 (414)
Q Consensus 39 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 118 (414)
++++||+||+++++++.++.+++++++++|++|++ .|+++|..+|.++|+++++.|++++++|++++++|+|||+.++
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 78 (452)
T cd07147 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR--PMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDA 78 (452)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Confidence 36799999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred hhCcHHHHHHHHHHHHHHhhhhcCceeec-----cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEe
Q 015020 119 KMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193 (414)
Q Consensus 119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlk 193 (414)
+. |+..++..+++++..+.+..++..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 79 ~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlK 157 (452)
T cd07147 79 RG-EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLK 157 (452)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEE
Confidence 86 99999999999998776554332221 1234567889999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCC
Q 015020 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273 (414)
Q Consensus 194 ps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~ 273 (414)
||+.+|.++.+|.++|.++|+|+|++|+++|+. +.+..|+.|++++.|+||||+.+|+.|++.++ .+|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~l~~ag~P~g~v~~v~g~~-~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~---~~~v~lelgG~ 233 (452)
T cd07147 158 PASRTPLSALILGEVLAETGLPKGAFSVLPCSR-DDADLLVTDERIKLLSFTGSPAVGWDLKARAG---KKKVVLELGGN 233 (452)
T ss_pred CCCCCcHHHHHHHHHHHHcCCCcCcEEEEeCCc-cchhHHhcCCCCCEEEEECCHHHHHHHHHHhC---cCceEeecCCC
Confidence 999999999999999999999999999999954 67899999999999999999999999999876 37999999999
Q ss_pred CceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHH
Q 015020 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR 353 (414)
Q Consensus 274 ~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 353 (414)
||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++.++++
T Consensus 234 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 313 (452)
T cd07147 234 AAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAER 313 (452)
T ss_pred CcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 354 ILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 354 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+.++|++++++|+++++||.. .|+|++|||+.+++++|+++++|+||||++|++|++
T Consensus 314 ~~~~i~~a~~~Ga~~l~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 370 (452)
T cd07147 314 VEGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDD 370 (452)
T ss_pred HHHHHHHHHHCCCEEEecCCc---CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCC
Confidence 999999999999999999975 488999999999999999999999999999999986
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-77 Score=601.87 Aligned_cols=359 Identities=37% Similarity=0.616 Sum_probs=340.0
Q ss_pred CceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHH
Q 015020 47 GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGA 126 (414)
Q Consensus 47 g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~ 126 (414)
|+++++++.++.++++++++.|++||+ .|+++|..+|.++|+++++.|++++++|++++++|+|||..++.. |+..+
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~ 77 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQR--AWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGF-EVGAA 77 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHH
Confidence 688999999999999999999999999 999999999999999999999999999999999999999999986 99999
Q ss_pred HHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHH-HHH
Q 015020 127 ANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA-LYF 205 (414)
Q Consensus 127 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~-~~l 205 (414)
++.+++++.......+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++ .++
T Consensus 78 i~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l 157 (443)
T cd07152 78 IGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVI 157 (443)
T ss_pred HHHHHHHHHhHHHhCCccccccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHH
Confidence 9999999987765444433333455678899999999999999999999999999999999999999999999996 789
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHH
Q 015020 206 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVN 285 (414)
Q Consensus 206 ~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~ 285 (414)
.++|.++|+|+|++|+++| +.+.+..|+.|++++.|+||||+.+|+.|++.++ ++++|+++|+|||||+||++|||++
T Consensus 158 ~~~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa-~~~~~~~lElGGk~~~iV~~dAdl~ 235 (443)
T cd07152 158 ARLFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAG-RHLKKVSLELGGKNALIVLDDADLD 235 (443)
T ss_pred HHHHHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCcEEEECCCCCeEEECCCCCHH
Confidence 9999999999999999998 5578999999999999999999999999999998 7899999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcC
Q 015020 286 TAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG 365 (414)
Q Consensus 286 ~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~G 365 (414)
.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|
T Consensus 236 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G 315 (443)
T cd07152 236 LAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAG 315 (443)
T ss_pred HHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 366 ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 366 a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++++||.. +|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 316 a~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 360 (443)
T cd07152 316 ARLEAGGTY---DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDS 360 (443)
T ss_pred CEEEeccCc---CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCC
Confidence 999999974 489999999999999999999999999999999985
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-77 Score=598.62 Aligned_cols=362 Identities=36% Similarity=0.573 Sum_probs=339.5
Q ss_pred EeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhh
Q 015020 40 ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK 119 (414)
Q Consensus 40 ~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 119 (414)
+++||+||+++++++.++.+++++++++|++ .|+.+|..+|.++|+++++.|++++++|++++++|+|||+.+++
T Consensus 2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~-----~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~ 76 (451)
T cd07146 2 EVRNPYTGEVVGTVPAGTEEALREALALAAS-----YRSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTR 76 (451)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 5789999999999999999999999999875 37789999999999999999999999999999999999999998
Q ss_pred hCcHHHHHHHHHHHHHHhhhhcCceeecc-----CCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEec
Q 015020 120 MGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194 (414)
Q Consensus 120 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkp 194 (414)
. |+..+++.+++++..+....++..+.. .+...+..++|+|||++|+|||||++..++++++||++||+||+||
T Consensus 77 ~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKp 155 (451)
T cd07146 77 Y-EVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKP 155 (451)
T ss_pred H-HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence 6 999999999999987765544332211 2345678999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCC
Q 015020 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 274 (414)
Q Consensus 195 s~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~ 274 (414)
|+.+|+++..+.++|.++|+|+|++++++|++.+++..|++|++++.|+||||+.+|+.|++.++ ++++++|+||||
T Consensus 156 s~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~---~~~~~lElGG~~ 232 (451)
T cd07146 156 SEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG---YKRQLLELGGND 232 (451)
T ss_pred CCCchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc---CCceeeecCCCc
Confidence 99999999999999999999999999999977778999999999999999999999999998765 589999999999
Q ss_pred ceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHH
Q 015020 275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI 354 (414)
Q Consensus 275 ~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~ 354 (414)
|+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++
T Consensus 233 p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v 312 (451)
T cd07146 233 PLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQI 312 (451)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 355 LSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 355 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 313 ~~~v~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 368 (451)
T cd07146 313 ENRVEEAIAQGARVLLGNQR---QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKD 368 (451)
T ss_pred HHHHHHHHhCCCEEEeCCCc---CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCC
Confidence 99999999999999999964 589999999999999999999999999999999985
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-76 Score=600.15 Aligned_cols=368 Identities=34% Similarity=0.549 Sum_probs=340.8
Q ss_pred ecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhC
Q 015020 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG 121 (414)
Q Consensus 42 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ 121 (414)
+||+||+++++++.++.+|++++++.|++|++ .|+++|..+|.++|+++++.|.+++++|++++++|+|||+.+++..
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ 78 (465)
T cd07098 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQR--EWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLG 78 (465)
T ss_pred CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 59999999999999999999999999999999 9999999999999999999999999999999999999999998655
Q ss_pred cHHHHHHHHHHHHHHhhhhcCc-eeecc---CCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCC
Q 015020 122 DIPGAANTLRYYAGAADKIHGE-VLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197 (414)
Q Consensus 122 ev~~~~~~l~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~ 197 (414)
|+..+++.+++++..++..... ..+.. .+...++.++|+||+++|+|||||+..+++++++||++||+||+|||+.
T Consensus 79 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~ 158 (465)
T cd07098 79 EILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQ 158 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 8999999999998776553221 11211 1234678899999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCC
Q 015020 198 TPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273 (414)
Q Consensus 198 ~~~~~~~l~~~l----~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~ 273 (414)
+|+++..+++++ .++|+|+|++|+++|++ +.++.|+.|++++.|.||||+.+|+.|++.++ ++++|+++|+|||
T Consensus 159 ~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~-~~~~~~~lelgG~ 236 (465)
T cd07098 159 VAWSSGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAEALTSHPVIDHITFIGSPPVGKKVMAAAA-ESLTPVVLELGGK 236 (465)
T ss_pred CcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCeEEEECCCC
Confidence 999998766554 68999999999999965 78999999999999999999999999999998 7899999999999
Q ss_pred CceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHH
Q 015020 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR 353 (414)
Q Consensus 274 ~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 353 (414)
||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++.++++|+|.++++++||++++.++++
T Consensus 237 ~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~ 316 (465)
T cd07098 237 DPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDR 316 (465)
T ss_pred CeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeCCcccC----CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 354 ILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 354 ~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+.++|++++++|+++++||.... ..|+|++|||+.+++++|+++++|+||||++|++|++
T Consensus 317 ~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 380 (465)
T cd07098 317 LEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASD 380 (465)
T ss_pred HHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCC
Confidence 99999999999999999986532 2589999999999999999999999999999999985
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-76 Score=599.35 Aligned_cols=370 Identities=48% Similarity=0.831 Sum_probs=348.7
Q ss_pred eecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhh
Q 015020 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120 (414)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 120 (414)
++||+||+++++++.++.++++++++.|++|++ .|+++|.++|.++|+++++.|.+++++|++++++|+||+..+++.
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~ 78 (455)
T cd07093 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFP--GWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLART 78 (455)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 369999999999999999999999999999999 999999999999999999999999999999999999999988865
Q ss_pred CcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChH
Q 015020 121 GDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200 (414)
Q Consensus 121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~ 200 (414)
.|+..+++.++++++......+...+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 79 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~ 158 (455)
T cd07093 79 RDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPL 158 (455)
T ss_pred HHHHHHHHHHHHHHHhHHHhCCccccCCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcH
Confidence 59999999999999877654433333334556788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcC
Q 015020 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280 (414)
Q Consensus 201 ~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~ 280 (414)
++..+.++|.++|+|+|++++++|.+.+.+..|+.|++++.|+||||+.+|+.|++.++ ++++|+++|+|||||+||++
T Consensus 159 ~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~~ 237 (455)
T cd07093 159 TAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAA-PNLKPVSLELGGKNPNIVFA 237 (455)
T ss_pred HHHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHh-hcccceEeecCCCCceEECC
Confidence 99999999999999999999999977778999999999999999999999999999999 78999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHH
Q 015020 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH 360 (414)
Q Consensus 281 dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~ 360 (414)
|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++
T Consensus 238 dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 317 (455)
T cd07093 238 DADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVEL 317 (455)
T ss_pred CCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEeCCcccC----CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 361 GKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 361 a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++.+|+++++||.... ..|+|++|||+.++++++++++||+||||++|++|++
T Consensus 318 a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 374 (455)
T cd07093 318 ARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDD 374 (455)
T ss_pred HHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCC
Confidence 9999999999997642 2489999999999999999999999999999999986
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-76 Score=633.73 Aligned_cols=380 Identities=33% Similarity=0.482 Sum_probs=353.6
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCc-eEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 015020 22 TKLFINGEFVDSVSGKTFETIDPRTGE-AIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (414)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~-~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (414)
.+.+||| ++..++++||+|++ ++++++.++.+++++||+.|++||+ .|+.+|..+|+++|++++++|++++
T Consensus 553 ~~~~i~g------~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~--~W~~~~~~~Ra~iL~kaAdll~~~~ 624 (1038)
T PRK11904 553 AGPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFP--AWSRTPVEERAAILERAADLLEANR 624 (1038)
T ss_pred ecceEcC------CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhH
Confidence 4456777 34679999999988 9999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCc--eeeccCCccceeeecCCceEEEEcCCchhHHhhHH
Q 015020 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE--VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (414)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (414)
++|+.++++|+|||+.++.. |+..++++++||+..+.+..+. ..+...+..++..++|+|||++|+|||||+.+.++
T Consensus 625 ~eL~~l~~~E~GK~~~~a~~-EV~eaid~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~ 703 (1038)
T PRK11904 625 AELIALCVREAGKTLQDAIA-EVREAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCISPWNFPLAIFLG 703 (1038)
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEECCCccHHHHHHH
Confidence 99999999999999999986 9999999999999998776543 23444567788999999999999999999999999
Q ss_pred hHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHH
Q 015020 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (414)
Q Consensus 179 ~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (414)
++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++|++.+++..|+.||+++.|+||||+.+|+.|.+.+
T Consensus 704 ~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~ 783 (1038)
T PRK11904 704 QVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTL 783 (1038)
T ss_pred HHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998878999999999999999999999999999988
Q ss_pred HhC--CCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCC
Q 015020 259 ATS--NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (414)
Q Consensus 259 ~~~--~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~ 336 (414)
+.. .++|+++|+|||||+||++|||+|.|++.+++|+|.|+||.|+++++||||++++|+|+++|+++++++++|+|.
T Consensus 784 A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~ 863 (1038)
T PRK11904 784 AARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPR 863 (1038)
T ss_pred hhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcc
Confidence 732 268999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++++||+|++.+++++.++|+++++ |+++++||..++ ..|+|+.|||+.. +++.++++|+||||++|++|++
T Consensus 864 d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~~~ 939 (1038)
T PRK11904 864 LLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRYKA 939 (1038)
T ss_pred cccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEeCC
Confidence 999999999999999999999999876 889999997643 2599999999963 6788899999999999999974
|
|
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-76 Score=592.42 Aligned_cols=347 Identities=38% Similarity=0.568 Sum_probs=327.2
Q ss_pred HHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhh
Q 015020 61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI 140 (414)
Q Consensus 61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~ 140 (414)
++++++.|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+|||..+++. |+..+++.+++++..+++.
T Consensus 1 v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~ 77 (429)
T cd07100 1 IEAALDRAHAAFL--AWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARA-EVEKCAWICRYYAENAEAF 77 (429)
T ss_pred CHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHh
Confidence 4689999999999 999999999999999999999999999999999999999999986 9999999999999888766
Q ss_pred cC-ceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcE
Q 015020 141 HG-EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVL 219 (414)
Q Consensus 141 ~~-~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~ 219 (414)
.. ...+. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|.++|.++|+|+|++
T Consensus 78 ~~~~~~~~-~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv 156 (429)
T cd07100 78 LADEPIET-DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVF 156 (429)
T ss_pred cCCeeccC-CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcE
Confidence 43 22322 24457889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccC
Q 015020 220 NVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK 299 (414)
Q Consensus 220 ~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~ 299 (414)
|+++|++ +.+..|+.|++++.|.||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+
T Consensus 157 ~~v~g~~-~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa-~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~ 234 (429)
T cd07100 157 QNLLIDS-DQVEAIIADPRVRGVTLTGSERAGRAVAAEAG-KNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNA 234 (429)
T ss_pred EEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhcc
Confidence 9999955 56788999999999999999999999999998 889999999999999999999999999999999999999
Q ss_pred CCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCC
Q 015020 300 GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG 379 (414)
Q Consensus 300 GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g 379 (414)
||.|++++|||||++++|+|+++|++++.++++|+|+++++++||++++.+++++.++|++++++|+++++||......|
T Consensus 235 GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g 314 (429)
T cd07100 235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPG 314 (429)
T ss_pred CCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997643458
Q ss_pred CeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 380 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 380 ~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+|++|||+.+++++|++++||+||||++|++|++
T Consensus 315 ~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 348 (429)
T cd07100 315 AFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKD 348 (429)
T ss_pred eEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCC
Confidence 9999999999999999999999999999999986
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-76 Score=588.62 Aligned_cols=349 Identities=31% Similarity=0.455 Sum_probs=327.0
Q ss_pred HHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhh
Q 015020 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK 139 (414)
Q Consensus 60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~ 139 (414)
|++++++.|++||+ .|+++|..+|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++....+
T Consensus 1 ~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~ 77 (431)
T cd07095 1 QVDAAVAAARAAFP--GWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQT-EVAAMAGKIDISIKAYHE 77 (431)
T ss_pred CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 47899999999999 999999999999999999999999999999999999999999986 999999999999887766
Q ss_pred hcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcE
Q 015020 140 IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVL 219 (414)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~ 219 (414)
..+.......+...++.++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++.++.++|.++|+|+|++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~ 157 (431)
T cd07095 78 RTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVL 157 (431)
T ss_pred hcCCcccCCCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHh
Confidence 54433222235567899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccC
Q 015020 220 NVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK 299 (414)
Q Consensus 220 ~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~ 299 (414)
++++|+ .+.+..|++|++++.|+||||+.+|+.|++.++.+.++++.+|+|||||+||++|||++.|++.+++++|.|+
T Consensus 158 ~~v~g~-~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~ 236 (431)
T cd07095 158 NLVQGG-RETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTA 236 (431)
T ss_pred eEEeCc-HHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhC
Confidence 999984 5689999999999999999999999999998773457999999999999999999999999999999999999
Q ss_pred CCccccCCceEeecc-hHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCC
Q 015020 300 GEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK 378 (414)
Q Consensus 300 GQ~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~ 378 (414)
||.|++++|||||++ ++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||...+.+
T Consensus 237 GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~~ 316 (431)
T cd07095 237 GQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAG 316 (431)
T ss_pred CCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCCC
Confidence 999999999999999 9999999999999999999999999999999999999999999999999999999999765457
Q ss_pred CCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 379 g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
|+|++|||+ +++++|++++||+||||++|++|++
T Consensus 317 g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~ 350 (431)
T cd07095 317 TAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDD 350 (431)
T ss_pred CeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCC
Confidence 999999999 6999999999999999999999985
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-75 Score=590.97 Aligned_cols=366 Identities=40% Similarity=0.658 Sum_probs=344.2
Q ss_pred EEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhh
Q 015020 39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA 118 (414)
Q Consensus 39 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 118 (414)
++++||+||+++++++.++.++++++++.|++|++ .|+++|..+|.++|+++++.|.+++++|++++++|+|||..++
T Consensus 1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 78 (453)
T cd07149 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAK--EMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDA 78 (453)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHH
Confidence 46789999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred hhCcHHHHHHHHHHHHHHhhhhcCceeec-----cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEe
Q 015020 119 KMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193 (414)
Q Consensus 119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlk 193 (414)
+. |+..+++.+++++..+....++..+. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 79 ~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~K 157 (453)
T cd07149 79 RK-EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLK 157 (453)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEE
Confidence 86 99999999999988776654433221 1123457889999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCC
Q 015020 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273 (414)
Q Consensus 194 ps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~ 273 (414)
||+.+|.++..+.++|.++|+|+|++++++|++.+++..|+.|++++.|+||||+.+|+.|++.++ ++|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~---~~~~~lelGGk 234 (453)
T cd07149 158 PASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG---LKKVTLELGSN 234 (453)
T ss_pred CCCcchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC---CCceeeecCCC
Confidence 999999999999999999999999999999977677899999999999999999999999998864 78999999999
Q ss_pred CceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHH
Q 015020 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR 353 (414)
Q Consensus 274 ~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 353 (414)
||+||++|+|++.+++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++.++++
T Consensus 235 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 314 (453)
T cd07149 235 AAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAER 314 (453)
T ss_pred ceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 354 ILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 354 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+.++|++++.+|+++++||.. .|+|++|||+.+++++|+++++|+||||++|++|++
T Consensus 315 ~~~~i~~a~~~ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 371 (453)
T cd07149 315 IEEWVEEAVEGGARLLTGGKR---DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDT 371 (453)
T ss_pred HHHHHHHHHHCCCEEEeCCCC---CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCC
Confidence 999999999999999999975 488999999999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-75 Score=631.63 Aligned_cols=370 Identities=29% Similarity=0.464 Sum_probs=344.9
Q ss_pred eeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 015020 24 LFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (414)
Q Consensus 24 ~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (414)
.+|+|+. ..+..++++||+| ++++++++.++.+++++|++.|+++|+ .|+.+|..+|+++|++++++|++++++
T Consensus 649 p~~~~~~---~~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~--~W~~~p~~eRa~iL~r~Adlle~~~~e 723 (1318)
T PRK11809 649 PMLEDPV---AAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAP--IWFATPPAERAAILERAADLMEAQMQT 723 (1318)
T ss_pred CcccCcC---CCCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHH
Confidence 3466632 2456899999998 789999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhh
Q 015020 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (414)
Q Consensus 103 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ 182 (414)
|+.++++|+|||+.++.. |+..++++++||+..++... ....++|+|||++|+|||||+.++++++++
T Consensus 724 L~~l~~~EaGKt~~~A~~-EV~eaidflryyA~~a~~~~-----------~~~~~~PlGVV~~IsPWNFPlai~~g~iaa 791 (1318)
T PRK11809 724 LMGLLVREAGKTFSNAIA-EVREAVDFLRYYAGQVRDDF-----------DNDTHRPLGPVVCISPWNFPLAIFTGQVAA 791 (1318)
T ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhc-----------CCceeecccEEEEECCCccHHHHHHHHHHH
Confidence 999999999999999986 99999999999998775421 124689999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCC
Q 015020 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262 (414)
Q Consensus 183 ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~ 262 (414)
||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.+++..|+.||+|+.|+||||+++|+.|++.++ .+
T Consensus 792 ALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA-~~ 870 (1318)
T PRK11809 792 ALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLA-GR 870 (1318)
T ss_pred HHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHh-hh
Confidence 99999999999999999999999999999999999999999988888999999999999999999999999999988 55
Q ss_pred C------cceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCC
Q 015020 263 L------KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (414)
Q Consensus 263 ~------~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~ 336 (414)
+ +|+++|+||+|++||++|||+|.+++.+++|+|.|+||.|++++++|||++++|+|+++|+++++++++|+|.
T Consensus 871 l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~ 950 (1318)
T PRK11809 871 LDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPD 950 (1318)
T ss_pred cccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 4 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+.++++||+|++.+++++.++|++++++|++++.||.... ..|+|++|||+.. +++.++++|+||||++|++|++
T Consensus 951 ~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~ 1028 (1318)
T PRK11809 951 RLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNR 1028 (1318)
T ss_pred cccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCC
Confidence 9999999999999999999999999999999999875431 3599999999974 6788899999999999999963
|
|
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-73 Score=575.06 Aligned_cols=349 Identities=27% Similarity=0.399 Sum_probs=322.8
Q ss_pred CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHH
Q 015020 56 GDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135 (414)
Q Consensus 56 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~ 135 (414)
+..+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++..|+..+++.++++++
T Consensus 3 ~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~ 80 (484)
T PLN02203 3 APGETLEGSVAELRETYE--SGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALS 80 (484)
T ss_pred CCHHHHHHHHHHHHHHHH--hcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999999 999999999999999999999999999999999999999999963499999999999998
Q ss_pred HhhhhcCc---eeec-cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHH
Q 015020 136 AADKIHGE---VLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 211 (414)
Q Consensus 136 ~~~~~~~~---~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~ 211 (414)
..++..+. ..+. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++.+++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~ 160 (484)
T PLN02203 81 NLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPK 160 (484)
T ss_pred HHHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH
Confidence 77655332 1111 1334678999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcC---CCCHHHHH
Q 015020 212 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD---DVDVNTAA 288 (414)
Q Consensus 212 aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~---dadl~~a~ 288 (414)
+ +|+|++|+++| +.+++..|+.|+ ++.|+||||+.+|+.|++.++ ++++|+++|+|||||+||++ |||++.|+
T Consensus 161 ~-lP~gvv~vv~g-~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa-~~l~~v~lElGGknp~iV~~d~~daDl~~aa 236 (484)
T PLN02203 161 Y-LDSKAVKVIEG-GPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAA-KHLTPVALELGGKCPCIVDSLSSSRDTKVAV 236 (484)
T ss_pred h-CCcCEEEEEeC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHH-hcCCCEEEEecCCCeEEEccCCCCCCHHHHH
Confidence 6 99999999999 668899999994 999999999999999999998 88999999999999999997 69999999
Q ss_pred HHHHHHHhc-cCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCE
Q 015020 289 DMALLGILF-NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 367 (414)
Q Consensus 289 ~~i~~~~~~-~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~ 367 (414)
+.+++++|. |+||.|++++|+|||++++|+|+++|++++.++++|+|.++ +++||++++++++++.++|++++++ ++
T Consensus 237 ~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~ 314 (484)
T PLN02203 237 NRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-AS 314 (484)
T ss_pred HHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-Ce
Confidence 999999995 89999999999999999999999999999999999999886 6899999999999999999999887 68
Q ss_pred EEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 368 LLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 368 v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++||... ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 315 ~~~gg~~~-~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~ 359 (484)
T PLN02203 315 IVHGGSID-EKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKK 359 (484)
T ss_pred EEeCCCcC-CCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCC
Confidence 99998753 3689999999999999999999999999999999985
|
|
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-74 Score=572.45 Aligned_cols=347 Identities=29% Similarity=0.429 Sum_probs=321.9
Q ss_pred CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHH
Q 015020 56 GDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135 (414)
Q Consensus 56 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~ 135 (414)
.+.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++..|+..+++.+++++.
T Consensus 2 ~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~ 79 (436)
T cd07135 2 TPLDEIDSIHSRLRATFR--SGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLK 79 (436)
T ss_pred CCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHH
Confidence 578999999999999999 999999999999999999999999999999999999999999873499999999999998
Q ss_pred HhhhhcCce-eec----cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHH
Q 015020 136 AADKIHGEV-LKM----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 210 (414)
Q Consensus 136 ~~~~~~~~~-~~~----~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~ 210 (414)
.+++..... ... ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~ 159 (436)
T cd07135 80 NLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVP 159 (436)
T ss_pred HHHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHH
Confidence 876643221 111 123457889999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHH
Q 015020 211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 290 (414)
Q Consensus 211 ~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~ 290 (414)
+ |+|+|++++++|++.+. ..|+.|+ ++.|.||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.
T Consensus 160 ~-~lP~g~v~vv~g~~~~~-~~l~~~~-vd~v~ftGs~~~g~~i~~~aa-~~~~~~~lelgG~~~~iV~~dADl~~aa~~ 235 (436)
T cd07135 160 K-YLDPDAFQVVQGGVPET-TALLEQK-FDKIFYTGSGRVGRIIAEAAA-KHLTPVTLELGGKSPVIVTKNADLELAAKR 235 (436)
T ss_pred H-hCCcCEEEEEcCCchhH-HHHHhCC-CCEEEEECCcHHHHHHHHHHH-hcCCCeEEEccCCCcEEECCCCCHHHHHHH
Confidence 9 69999999999966554 4588999 999999999999999999988 789999999999999999999999999999
Q ss_pred HHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEe
Q 015020 291 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 370 (414)
Q Consensus 291 i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~ 370 (414)
+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++|+++ |+++++
T Consensus 236 i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~ 311 (436)
T cd07135 236 ILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVI 311 (436)
T ss_pred HHHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEE
Confidence 999999999999999999999999999999999999999999999 8999999999999999999999987 889999
Q ss_pred CCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 371 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 371 gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
||... .+|+|++|||+.+++++|+++++|+||||++|++|++
T Consensus 312 gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~ 353 (436)
T cd07135 312 GGEMD-EATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDD 353 (436)
T ss_pred CCCcC-CCCCEEccEEEecCCCccHHHhccccCCceEEEecCC
Confidence 99764 3689999999999999999999999999999999986
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-73 Score=578.93 Aligned_cols=362 Identities=20% Similarity=0.231 Sum_probs=320.2
Q ss_pred eEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhh
Q 015020 38 TFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSW 117 (414)
Q Consensus 38 ~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 117 (414)
.-.=+||+|++++++++.++. ++++++|++||+ .|++++..+|.++|++++++|++++++|++++++|+|||..+
T Consensus 66 ~~~e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~--~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~ 140 (551)
T TIGR02288 66 VGGERSPYGVELGVTYPQCDG---DALLDAAHAALP--GWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMM 140 (551)
T ss_pred cccccCCCCCCEEEEEcCCCH---HHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHH
Confidence 345679999999999999985 899999999999 899999999999999999999999999999999999999998
Q ss_pred hhh-C---cHHHHHHHHHHHHHHhhhhcCcee---ecc-CC---ccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhc
Q 015020 118 AKM-G---DIPGAANTLRYYAGAADKIHGEVL---KMS-RA---LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAA 186 (414)
Q Consensus 118 a~~-~---ev~~~~~~l~~~~~~~~~~~~~~~---~~~-~~---~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaa 186 (414)
++. + ++.+.++.++|++..+.++.+... +.. .. ...+..++|+||+++|+|||||+++.++++++||++
T Consensus 141 a~e~gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaa 220 (551)
T TIGR02288 141 AFQAGGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLAT 220 (551)
T ss_pred HHhccChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHc
Confidence 842 1 667889999999988776654432 111 11 122347899999999999999999999999999999
Q ss_pred CCEEEEecCCCChHHHH----HHHHHHHHcCCCCCcEEEEeCC-chhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhC
Q 015020 187 GCTMIVKPAEQTPLIAL----YFAHLAKLAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (414)
Q Consensus 187 GN~vvlkps~~~~~~~~----~l~~~l~~aglP~g~~~~v~g~-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 261 (414)
||+||+|||+.+|+++. ++.++|.++|+|+|++|+++|. +.++++.|+.||+|+.|.||||+.+|+.|++.++
T Consensus 221 GN~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa-- 298 (551)
T TIGR02288 221 GNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR-- 298 (551)
T ss_pred CCeEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--
Confidence 99999999999999655 6779999999999999999985 6678999999999999999999999999999876
Q ss_pred CCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecc---------hHHHHHHHHHHHHhcccc
Q 015020 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG---------IYDEFEKKLVEKAKAWVV 332 (414)
Q Consensus 262 ~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~---------i~~~f~~~l~~~~~~~~~ 332 (414)
.+++++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|||||++ +||+|+++|+++++++ +
T Consensus 299 -~~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-v 376 (551)
T TIGR02288 299 -QAQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-L 376 (551)
T ss_pred -cCcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-c
Confidence 3799999999999999999999999999999999999999999999999999 7999999999999999 9
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCC-CeEeeEEEeeCCCCCcccccccccceeeE
Q 015020 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKG-YYIEPTIFTNVTEDMLIAKNEIFGPVMAL 408 (414)
Q Consensus 333 g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g-~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v 408 (414)
|||.++.+++|||+++.+++++ ++++++| ++++||.... .+| +|++|||+...+++|++++||+||||++|
T Consensus 377 Gdp~~~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V 451 (551)
T TIGR02288 377 GDPARATAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFV 451 (551)
T ss_pred CCcccccccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEE
Confidence 9999999999999999999995 6677788 6667765421 135 68899999433349999999999999999
Q ss_pred EEEec
Q 015020 409 MKFKI 413 (414)
Q Consensus 409 ~~~~~ 413 (414)
++|++
T Consensus 452 ~~~~d 456 (551)
T TIGR02288 452 VAVDD 456 (551)
T ss_pred EEECC
Confidence 99986
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-73 Score=619.27 Aligned_cols=371 Identities=32% Similarity=0.502 Sum_probs=345.4
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 015020 23 KLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (414)
Q Consensus 23 ~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (414)
+.+|+|+.. .+..++++||+| ++++++++.++.+++++||+.|++||+ .|+.+|..+|+++|++++++|+++++
T Consensus 556 ~~~i~g~~~---~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~--~W~~~~~~~Ra~iL~raAdll~~~~~ 630 (1208)
T PRK11905 556 APLLAGGDV---DGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFP--EWSATPAAERAAILERAADLMEAHMP 630 (1208)
T ss_pred cceeccccc---cCCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 456677654 245789999999 999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHh
Q 015020 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181 (414)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~ 181 (414)
+|+.++++|+||++.++.. |+..++++++||+..++...+ ...++|+|||++|+|||||+.+++++++
T Consensus 631 eL~~l~~~E~GKt~~ea~~-Ev~eaid~lr~ya~~a~~~~~-----------~~~~~P~GVv~~IsPwNfPlai~~g~i~ 698 (1208)
T PRK11905 631 ELFALAVREAGKTLANAIA-EVREAVDFLRYYAAQARRLLN-----------GPGHKPLGPVVCISPWNFPLAIFTGQIA 698 (1208)
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcC-----------CceecCccEEEEEcCCcCHHHHHHHHHH
Confidence 9999999999999999986 999999999999988765421 2457899999999999999999999999
Q ss_pred hHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhC
Q 015020 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (414)
Q Consensus 182 ~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 261 (414)
+||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.+++..|+.||+|+.|+||||+.+|+.|++.++ .
T Consensus 699 aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A-~ 777 (1208)
T PRK11905 699 AALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLA-K 777 (1208)
T ss_pred HHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHH-h
Confidence 999999999999999999999999999999999999999999988779999999999999999999999999999988 4
Q ss_pred C---CcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCC
Q 015020 262 N---LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (414)
Q Consensus 262 ~---~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~ 338 (414)
+ .+|+++|+|||||+||++|||+|.+++.+++|+|.|+||.|++++++|||++++|+|+++|+++++++++|||.+.
T Consensus 778 ~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~ 857 (1208)
T PRK11905 778 RSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRL 857 (1208)
T ss_pred hcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhc
Confidence 4 4899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++||+|++.+++++.++|++++++|+.++.|+.... .+|+|+.|||+. + +++.++++|+||||++|++|++
T Consensus 858 ~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~-~-~~~~~~~eEiFGPVL~V~~y~~ 931 (1208)
T PRK11905 858 STDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIE-I-DSISDLEREVFGPVLHVVRFKA 931 (1208)
T ss_pred cCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEe-c-CChHHhcCCccCceEEEEEeCC
Confidence 99999999999999999999999999998887764321 469999999996 3 6788999999999999999974
|
|
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-73 Score=570.60 Aligned_cols=345 Identities=38% Similarity=0.593 Sum_probs=322.0
Q ss_pred HHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhh
Q 015020 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK 139 (414)
Q Consensus 60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~ 139 (414)
|++++++.|++||+ .|++++..+|.++|+++++.|++++++|++++++|+|||..+++. |+..+++.+++++...+.
T Consensus 1 ~v~~ai~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~-ei~~~~~~l~~~~~~~~~ 77 (432)
T cd07105 1 DADQAVEAAAAAFP--AWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGF-NVDLAAGMLREAASLITQ 77 (432)
T ss_pred CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 57899999999999 999999999999999999999999999999999999999988876 999999999999988776
Q ss_pred hcCceeecc-CCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 015020 140 IHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV 218 (414)
Q Consensus 140 ~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~ 218 (414)
..+...+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv 157 (432)
T cd07105 78 IIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGV 157 (432)
T ss_pred hcCeecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCc
Confidence 533333321 3445688999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCC---chhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHH
Q 015020 219 LNVVPGF---GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 295 (414)
Q Consensus 219 ~~~v~g~---~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~ 295 (414)
+|+++|+ +.+++..|+.||+++.|+||||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++
T Consensus 158 ~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa-~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~ 236 (432)
T cd07105 158 LNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAA-KHLKPVLLELGGKAPAIVLEDADLDAAANAALFGA 236 (432)
T ss_pred EEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHH
Confidence 9999985 2357899999999999999999999999999998 88999999999999999999999999999999999
Q ss_pred hccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc
Q 015020 296 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375 (414)
Q Consensus 296 ~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~ 375 (414)
|.|+||.|+++++||||++++|+|+++|++++.++++| ++++||++++.+++++.++|++++++|+++++||...
T Consensus 237 ~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~ 311 (432)
T cd07105 237 FLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLAD 311 (432)
T ss_pred HhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC
Confidence 99999999999999999999999999999999999988 5899999999999999999999999999999999764
Q ss_pred C-CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 376 G-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 376 ~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
. ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 312 ~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~ 350 (432)
T cd07105 312 ESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKD 350 (432)
T ss_pred CCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCC
Confidence 2 3589999999999999999999999999999999986
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-73 Score=565.12 Aligned_cols=323 Identities=35% Similarity=0.631 Sum_probs=305.0
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEc
Q 015020 89 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHII 167 (414)
Q Consensus 89 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 167 (414)
|++++++|++++++|++++++|+|||+.+++. |+..+++.+++++.+++...+...+. ..+...+++++|+|||++|+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGIL 79 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEEC
Confidence 57899999999999999999999999999986 99999999999999987765543322 23446788999999999999
Q ss_pred CCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecC
Q 015020 168 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247 (414)
Q Consensus 168 p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs 247 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.|++++.|+||||
T Consensus 80 p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs 159 (409)
T PRK10090 80 PWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGS 159 (409)
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999977778999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHH
Q 015020 248 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 327 (414)
Q Consensus 248 ~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~ 327 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|++++
T Consensus 160 ~~~g~~v~~~aa-~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~ 238 (409)
T PRK10090 160 VSAGEKIMAAAA-KNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM 238 (409)
T ss_pred HHHHHHHHHHHH-hcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCC-CCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCccccccccccee
Q 015020 328 KAWVVGDPFDP-AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 406 (414)
Q Consensus 328 ~~~~~g~p~~~-~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~ 406 (414)
+++++|+|.++ ++++|||+++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||+
T Consensus 239 ~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl 318 (409)
T PRK10090 239 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVL 318 (409)
T ss_pred HhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceE
Confidence 99999999998 89999999999999999999999999999999998754468999999999999999999999999999
Q ss_pred eEEEEec
Q 015020 407 ALMKFKI 413 (414)
Q Consensus 407 ~v~~~~~ 413 (414)
+|++|++
T Consensus 319 ~v~~~~~ 325 (409)
T PRK10090 319 PVVAFDT 325 (409)
T ss_pred EEEEECC
Confidence 9999985
|
|
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-73 Score=571.18 Aligned_cols=347 Identities=41% Similarity=0.682 Sum_probs=327.9
Q ss_pred HHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhh
Q 015020 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK 139 (414)
Q Consensus 60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~ 139 (414)
|++++++.|++|++ .|+.++..+|.++|+++++.|++++++|++++++|+||+..++.. |+..+++.+++++....+
T Consensus 1 ~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~-ei~~~~~~l~~~~~~~~~ 77 (431)
T cd07104 1 DVDRAYAAAAAAQK--AWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAF-EVGAAIAILREAAGLPRR 77 (431)
T ss_pred CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 57899999999999 999999999999999999999999999999999999999999986 999999999999988765
Q ss_pred hcCceeecc-CCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHH-HHHHHHHHHHcCCCCC
Q 015020 140 IHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI-ALYFAHLAKLAGVPDG 217 (414)
Q Consensus 140 ~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~-~~~l~~~l~~aglP~g 217 (414)
..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+ +..+.+++.++|+|+|
T Consensus 78 ~~~~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~g 157 (431)
T cd07104 78 PEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKG 157 (431)
T ss_pred hcCccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcc
Confidence 544433322 44567889999999999999999999999999999999999999999999998 5789999999999999
Q ss_pred cEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhc
Q 015020 218 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF 297 (414)
Q Consensus 218 ~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~ 297 (414)
++++++|++.+.+..|+.|++++.|+||||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.
T Consensus 158 vv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~ 236 (431)
T cd07104 158 VLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAG-RHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFL 236 (431)
T ss_pred cEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHh-hcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHh
Confidence 999999977778999999999999999999999999999998 7999999999999999999999999999999999999
Q ss_pred cCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC
Q 015020 298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 377 (414)
Q Consensus 298 ~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 377 (414)
|+||.|+++++||||++++|+|+++|++++..+++|+|.++++++||++++.+++++.+++++++.+|+++++||..
T Consensus 237 ~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~--- 313 (431)
T cd07104 237 HQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY--- 313 (431)
T ss_pred cCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999974
Q ss_pred CCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 378 ~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~ 349 (431)
T cd07104 314 EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDD 349 (431)
T ss_pred CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECC
Confidence 589999999999999999999999999999999986
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-73 Score=571.62 Aligned_cols=348 Identities=27% Similarity=0.421 Sum_probs=319.7
Q ss_pred CCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHH
Q 015020 55 EGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 134 (414)
Q Consensus 55 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~ 134 (414)
..+.++++++++.|+++|+ .|+.++..+|.++|+++++.|++|+++|++++++|+|||..++...|+..++..+++++
T Consensus 3 ~~~~~~i~~av~~a~~a~~--~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~ 80 (493)
T PTZ00381 3 PDNPEIIPPIVKKLKESFL--TGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLL 80 (493)
T ss_pred CCCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999 99999999999999999999999999999999999999999987569999999999988
Q ss_pred HHhhhhcCce-ee---ccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHH
Q 015020 135 GAADKIHGEV-LK---MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 210 (414)
Q Consensus 135 ~~~~~~~~~~-~~---~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~ 210 (414)
+..++..... .. .......+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++.+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~ 160 (493)
T PTZ00381 81 KHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLT 160 (493)
T ss_pred HHHHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHH
Confidence 7665542211 11 1123457889999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHH
Q 015020 211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 290 (414)
Q Consensus 211 ~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~ 290 (414)
++ +|+|++++++| +.+.+..|+.|+ +|.|+||||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.
T Consensus 161 ~~-lp~~~v~vv~g-~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa-~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~ 236 (493)
T PTZ00381 161 KY-LDPSYVRVIEG-GVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAA-ENLTPCTLELGGKSPVIVDKSCNLKVAARR 236 (493)
T ss_pred Hh-CCcCEEEEecC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHH-hcCCcEEEEcCCCCceEEcCCCCHHHHHHH
Confidence 96 99999999998 667888898887 999999999999999999998 899999999999999999999999999999
Q ss_pred HHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEe
Q 015020 291 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 370 (414)
Q Consensus 291 i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~ 370 (414)
+++++|.|+||.|+++++||||++++|+|+++|++.+++++ |++.++++++|||++.++++++.++|+ ++|+++++
T Consensus 237 i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~ 312 (493)
T PTZ00381 237 IAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVY 312 (493)
T ss_pred HHHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEE
Confidence 99999999999999999999999999999999999999986 666678899999999999999999996 46899999
Q ss_pred CCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 371 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 371 gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
||..+ ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 313 gG~~~-~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 354 (493)
T PTZ00381 313 GGEVD-IENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYEN 354 (493)
T ss_pred CCCcC-CCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCC
Confidence 99763 4688999999999999999999999999999999985
|
|
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-72 Score=561.88 Aligned_cols=342 Identities=27% Similarity=0.414 Sum_probs=315.0
Q ss_pred HHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcC
Q 015020 63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142 (414)
Q Consensus 63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~ 142 (414)
.+++.|++||+ .|+.++..+|.++|++++++|++++++|++++++|+|||+.++...|+..+++.+++++....+...
T Consensus 3 ~a~~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 80 (432)
T cd07137 3 RLVRELRETFR--SGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMA 80 (432)
T ss_pred HHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 48899999999 9999999999999999999999999999999999999999988644999999999999987755332
Q ss_pred ce---eec-cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 015020 143 EV---LKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV 218 (414)
Q Consensus 143 ~~---~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~ 218 (414)
.. .+. ......++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.+++++|.++ +|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gv 159 (432)
T cd07137 81 PEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKA 159 (432)
T ss_pred CcccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCe
Confidence 21 111 12235678999999999999999999999999999999999999999999999999999999995 99999
Q ss_pred EEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHh-c
Q 015020 219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL-F 297 (414)
Q Consensus 219 ~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~-~ 297 (414)
+|+++| +.+.+..|+.| .++.|+||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++| .
T Consensus 160 v~~v~g-~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa-~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~ 236 (432)
T cd07137 160 IKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAA-KHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGC 236 (432)
T ss_pred EEEEeC-CHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHH-hcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhc
Confidence 999999 55678889887 6999999999999999999998 789999999999999999999999999999999999 5
Q ss_pred cCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC
Q 015020 298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 377 (414)
Q Consensus 298 ~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 377 (414)
|+||.|++++|+|||++++|+|+++|.+++.++++|+| ++++++||++++.+++++.++|++++. |+++++||... .
T Consensus 237 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~~-~ 313 (432)
T cd07137 237 NNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGERD-E 313 (432)
T ss_pred cCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCcC-C
Confidence 99999999999999999999999999999999999999 468999999999999999999999998 89999999753 3
Q ss_pred CCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 378 ~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 349 (432)
T cd07137 314 KNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKK 349 (432)
T ss_pred CCCEEeeEEEecCCCcchhhhcccccCceEEEEeCC
Confidence 689999999999999999999999999999999985
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-72 Score=564.21 Aligned_cols=338 Identities=31% Similarity=0.482 Sum_probs=312.5
Q ss_pred HHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcC
Q 015020 63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142 (414)
Q Consensus 63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~ 142 (414)
+.+++|++||+ .|+++|..+|+++|++++++|++++++|++++++|+|||+.+++..|+..+++.+++++..++...+
T Consensus 2 ~~v~~a~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 79 (449)
T cd07136 2 SLVEKQRAFFK--TGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMK 79 (449)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 56889999999 9999999999999999999999999999999999999999999644999999999999988766543
Q ss_pred c-eeecc---CCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 015020 143 E-VLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV 218 (414)
Q Consensus 143 ~-~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~ 218 (414)
. ..+.. .+...++.++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+++++.++ +|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv 158 (449)
T cd07136 80 PKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEY 158 (449)
T ss_pred CCccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCE
Confidence 2 22211 2445788999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred EEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhcc
Q 015020 219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN 298 (414)
Q Consensus 219 ~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~ 298 (414)
+|+++| +.+.+..|+.|+ ++.|+||||+++|+.|++.++ ++++|+++|+|||||+||++|||+|.+++.+++++|.|
T Consensus 159 ~~~v~g-~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa-~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~ 235 (449)
T cd07136 159 VAVVEG-GVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAA-KHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLN 235 (449)
T ss_pred EEEEeC-ChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHH-hcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcc
Confidence 999999 446788888765 999999999999999999998 78999999999999999999999999999999999999
Q ss_pred CCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCC
Q 015020 299 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK 378 (414)
Q Consensus 299 ~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~ 378 (414)
+||.|++++|||||++++|+|+++|+++++++++|+|.+ .+++||++++.+++++.++|+++ ++++||... .+
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~~-~~ 308 (449)
T cd07136 236 AGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNTD-RE 308 (449)
T ss_pred cCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCcC-CC
Confidence 999999999999999999999999999999999999987 89999999999999999999874 899999763 36
Q ss_pred CCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 379 g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 309 g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~ 343 (449)
T cd07136 309 TLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDT 343 (449)
T ss_pred CCEEeeEEEecCCCcChHHhccccCCeeEEEEeCC
Confidence 89999999999999999999999999999999986
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-72 Score=567.48 Aligned_cols=366 Identities=19% Similarity=0.224 Sum_probs=327.1
Q ss_pred CCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Q 015020 34 VSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGK 113 (414)
Q Consensus 34 ~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk 113 (414)
.++....++||+|++.+++++.+ +++++|+.|++|++ .|++++..+|.++|.+++++|.+++++|++++++|+||
T Consensus 62 ~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~--~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk 136 (549)
T cd07127 62 ASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMP--GWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQ 136 (549)
T ss_pred CCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCC
Confidence 35678999999999999999997 89999999999999 99999999999999999999999999999999999999
Q ss_pred chhhhhhC----cHHHHHHHHHHHHHHhhhhcCceeecc-C------CccceeeecCCceEEEEcCCchhHHhhHHhHhh
Q 015020 114 LHSWAKMG----DIPGAANTLRYYAGAADKIHGEVLKMS-R------ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (414)
Q Consensus 114 ~~~~a~~~----ev~~~~~~l~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ 182 (414)
+..++... |++.+++.++|+.+.+..+.+...+.. . .......++|+||+++|+|||||+++.+.++++
T Consensus 137 ~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ 216 (549)
T cd07127 137 AFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFA 216 (549)
T ss_pred CHHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHH
Confidence 99887631 699999999999988776544322110 0 112234789999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHH----HHHHHHHHcCCCCCcEEEEeCC-chhHHHHhhhCCCcCEEEEecCHHHHHHHHHH
Q 015020 183 ALAAGCTMIVKPAEQTPLIAL----YFAHLAKLAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (414)
Q Consensus 183 ALaaGN~vvlkps~~~~~~~~----~l~~~l~~aglP~g~~~~v~g~-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (414)
||++||+||+|||+.+|+++. .+.++|.++|+|+|+||+++++ +.++++.|+.||+++.|.||||+.+|+.|++.
T Consensus 217 ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~ 296 (549)
T cd07127 217 SLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEAN 296 (549)
T ss_pred HHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999998864 4668999999999999999985 46789999999999999999999999999999
Q ss_pred HHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecc---------hHHHHHHHHHHHHh
Q 015020 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG---------IYDEFEKKLVEKAK 328 (414)
Q Consensus 258 ~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~---------i~~~f~~~l~~~~~ 328 (414)
++ .+|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|||||++ +||+|+++|+++++
T Consensus 297 a~---~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~ 373 (549)
T cd07127 297 AR---QAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAID 373 (549)
T ss_pred hc---cCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHH
Confidence 87 3799999999999999999999999999999999999999999999999999 89999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCC-CeEeeEEEeeCCCCCcccccccccc
Q 015020 329 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKG-YYIEPTIFTNVTEDMLIAKNEIFGP 404 (414)
Q Consensus 329 ~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g-~~~~Ptvl~~~~~~~~i~~~E~fgP 404 (414)
++ +|||.+..+++|||+++.+++++. ++++.|+ +++||.... .+| +|++||||.+++++|++++||+|||
T Consensus 374 ~l-~Gdp~~~~~~~Gpli~~~~~~ri~----~a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGP 447 (549)
T cd07127 374 GL-LADPARAAALLGAIQSPDTLARIA----EARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGP 447 (549)
T ss_pred Hh-cCCccccccccCCcCCHHHHHHHH----HHHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCc
Confidence 99 999999999999999999999985 4566675 788886531 134 4669999998889999999999999
Q ss_pred eeeEEEEec
Q 015020 405 VMALMKFKI 413 (414)
Q Consensus 405 v~~v~~~~~ 413 (414)
|++|++|++
T Consensus 448 Vl~V~~~~d 456 (549)
T cd07127 448 IAFVVATDS 456 (549)
T ss_pred eEEEEEeCC
Confidence 999999986
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-71 Score=556.53 Aligned_cols=342 Identities=30% Similarity=0.441 Sum_probs=312.9
Q ss_pred HHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCc-hhhhhhCcHHHHHHHHHHHHHHhhhhcC
Q 015020 64 AVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKL-HSWAKMGDIPGAANTLRYYAGAADKIHG 142 (414)
Q Consensus 64 av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~-~~~a~~~ev~~~~~~l~~~~~~~~~~~~ 142 (414)
.++.|++||+ .|+++|..+|.++|+++++.|++++++|++++++|+||+ ..++...|+..+++.+++++....+...
T Consensus 3 ~~~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~ 80 (434)
T cd07133 3 LLERQKAAFL--ANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMK 80 (434)
T ss_pred HHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5778999999 999999999999999999999999999999999999985 5676434999999999999987765433
Q ss_pred cee-ec---cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 015020 143 EVL-KM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV 218 (414)
Q Consensus 143 ~~~-~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~ 218 (414)
... .. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++ +|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g~ 159 (434)
T cd07133 81 PSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDE 159 (434)
T ss_pred CcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCe
Confidence 221 11 12345688999999999999999999999999999999999999999999999999999999997 99999
Q ss_pred EEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhcc
Q 015020 219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN 298 (414)
Q Consensus 219 ~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~ 298 (414)
+++++| +.+.+..|+.|+ ++.|+||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|
T Consensus 160 ~~~v~g-~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa-~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~ 236 (434)
T cd07133 160 VAVVTG-GADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAA-ENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLN 236 (434)
T ss_pred EEEEeC-ChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHH-hcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhcc
Confidence 999999 456788888765 999999999999999999988 78999999999999999999999999999999999999
Q ss_pred CCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--
Q 015020 299 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-- 376 (414)
Q Consensus 299 ~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-- 376 (414)
+||.|++++|||||++++|+|+++|+++++++++|+ ++++++||++++.+++++.++|++++++|+++++||....
T Consensus 237 ~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~ 314 (434)
T cd07133 237 AGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDF 314 (434)
T ss_pred CCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCC
Confidence 999999999999999999999999999999999886 4678999999999999999999999999999999997542
Q ss_pred CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 377 ~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
.+|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 315 ~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~ 351 (434)
T cd07133 315 AATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDS 351 (434)
T ss_pred CCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCC
Confidence 3589999999999999999999999999999999985
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-71 Score=554.26 Aligned_cols=344 Identities=29% Similarity=0.410 Sum_probs=318.7
Q ss_pred HHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcC
Q 015020 63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142 (414)
Q Consensus 63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~ 142 (414)
+++++|++||+ .|+++|..+|.++|+++++.|++++++|++++++|+|||+.+++..|+..+++.+++++........
T Consensus 2 ~~~~~a~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~ 79 (433)
T cd07134 2 RVFAAQQAHAL--ALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMK 79 (433)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 57889999999 9999999999999999999999999999999999999999998634999999999999877654322
Q ss_pred c-eeec---cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 015020 143 E-VLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV 218 (414)
Q Consensus 143 ~-~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~ 218 (414)
. .... ..+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++.++.+++.++ +|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~ 158 (433)
T cd07134 80 PKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDE 158 (433)
T ss_pred CcccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCE
Confidence 1 1211 12445789999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred EEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhcc
Q 015020 219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN 298 (414)
Q Consensus 219 ~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~ 298 (414)
+++++| +.+.+..|++|+ ++.|.||||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|
T Consensus 159 v~~v~g-~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa-~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~ 235 (433)
T cd07134 159 VAVFEG-DAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAA-KHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLN 235 (433)
T ss_pred EEEEeC-ChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHH-hcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcC
Confidence 999999 457888999998 999999999999999999998 78899999999999999999999999999999999999
Q ss_pred CCCccccCCceEeecchHHHHHHHHHHHHhccccCCC-CCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC
Q 015020 299 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 377 (414)
Q Consensus 299 ~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 377 (414)
+||.|+++++||||++++|+|+++|+++++.++.|+| .+.++++||++++.+++++.++|++++++|+++++||... .
T Consensus 236 ~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~-~ 314 (433)
T cd07134 236 AGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFD-A 314 (433)
T ss_pred cCCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcC-C
Confidence 9999999999999999999999999999999988887 8889999999999999999999999999999999999763 4
Q ss_pred CCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 378 ~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
.|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 315 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 350 (433)
T cd07134 315 AQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYED 350 (433)
T ss_pred CCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCC
Confidence 589999999999999999999999999999999986
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-69 Score=543.93 Aligned_cols=338 Identities=28% Similarity=0.412 Sum_probs=308.7
Q ss_pred HHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcC
Q 015020 63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142 (414)
Q Consensus 63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~ 142 (414)
+|+++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.++++++.++....
T Consensus 2 ~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 79 (443)
T cd07132 2 EAVRRAREAFS--SGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMK 79 (443)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 58899999999 9999999999999999999999999999999999999999998645999999999999887765532
Q ss_pred ceee----ccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 015020 143 EVLK----MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV 218 (414)
Q Consensus 143 ~~~~----~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~ 218 (414)
.... ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++ +|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv 158 (443)
T cd07132 80 PEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKEC 158 (443)
T ss_pred CccCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCe
Confidence 2111 112245788999999999999999999999999999999999999999999999999999999986 99999
Q ss_pred EEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhcc
Q 015020 219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN 298 (414)
Q Consensus 219 ~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~ 298 (414)
+++++|++. .+..|+. +++|.|+||||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|
T Consensus 159 ~~vv~g~~~-~~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~-~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~ 235 (443)
T cd07132 159 YPVVLGGVE-ETTELLK-QRFDYIFYTGSTSVGKIVMQAAA-KHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFIN 235 (443)
T ss_pred EEEEeCCHH-HHHHHHh-CCCCEEEEECChHHHHHHHHHHH-hhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhc
Confidence 999999554 4556665 58999999999999999999988 78999999999999999999999999999999999999
Q ss_pred CCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCC
Q 015020 299 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK 378 (414)
Q Consensus 299 ~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~ 378 (414)
+||.|++++|||||++++|+|+++|.+++++++.|+| ++++++||++++++++++.+++++ +++++||... .+
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~-~~ 308 (443)
T cd07132 236 AGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTD-EK 308 (443)
T ss_pred CCCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccC-CC
Confidence 9999999999999999999999999999999998888 688999999999999999999874 4899999753 35
Q ss_pred CCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 379 g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
|+|++|||+.+++++|+++++|+||||++|++|++
T Consensus 309 ~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~ 343 (443)
T cd07132 309 ERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNN 343 (443)
T ss_pred CCEEeeEEEeCCCCCChHHhccccCceeEEEEeCC
Confidence 89999999999999999999999999999999985
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-68 Score=534.18 Aligned_cols=338 Identities=30% Similarity=0.467 Sum_probs=309.2
Q ss_pred HHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcC
Q 015020 63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142 (414)
Q Consensus 63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~ 142 (414)
.+++.|++||+ .|+.+|..+|+++|++++++|++++++|++++++|+|||..++...|+..+++.+++++........
T Consensus 2 ~~v~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~ 79 (426)
T cd07087 2 ELVARLRETFL--TGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMK 79 (426)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 48899999999 9999999999999999999999999999999999999998777544999999999999887765433
Q ss_pred ce-ee---ccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 015020 143 EV-LK---MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV 218 (414)
Q Consensus 143 ~~-~~---~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~ 218 (414)
.. .. ...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.+++++|.+ |+|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv 158 (426)
T cd07087 80 PRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEA 158 (426)
T ss_pred CcccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCE
Confidence 21 11 11234578899999999999999999999999999999999999999999999999999999999 699999
Q ss_pred EEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhcc
Q 015020 219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN 298 (414)
Q Consensus 219 ~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~ 298 (414)
+++++|+. +.+..|+.|+ ++.|.||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|
T Consensus 159 ~~vv~g~~-~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~ 235 (426)
T cd07087 159 VAVVEGGV-EVATALLAEP-FDHIFFTGSPAVGKIVMEAAA-KHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLN 235 (426)
T ss_pred EEEEeCCc-hHHHHHHhCC-CCEEEEeCChHHHHHHHHHHH-hhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhc
Confidence 99999854 5688899998 999999999999999999998 78999999999999999999999999999999999999
Q ss_pred CCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCC
Q 015020 299 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK 378 (414)
Q Consensus 299 ~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~ 378 (414)
+||.|+++++||||++++|+|+++|++++++++.|+| ++.+++||++++.+++++.++++++ ++++||... .+
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~-~~ 308 (426)
T cd07087 236 AGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQVD-KE 308 (426)
T ss_pred cCCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccC-CC
Confidence 9999999999999999999999999999999986666 4689999999999999999999865 899999763 35
Q ss_pred CCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 379 g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
|+|++|||+.+++++|+++++|+||||++|++|++
T Consensus 309 g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~ 343 (426)
T cd07087 309 ERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDD 343 (426)
T ss_pred CCEEeeEEEecCCCCCHHHhcccccceEEEEEeCC
Confidence 89999999999999999999999999999999985
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-69 Score=533.69 Aligned_cols=327 Identities=21% Similarity=0.232 Sum_probs=286.8
Q ss_pred HHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHH--HHHHHHHHhh
Q 015020 61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAAN--TLRYYAGAAD 138 (414)
Q Consensus 61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~--~l~~~~~~~~ 138 (414)
+++|++.|++||+ .|+++|..+|.++|+++++.|++|+++|++++++|+|||+.+++. ++..... ..++++.
T Consensus 1 ~~~Ai~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~-~~~~~~~~~~~~~~~~--- 74 (439)
T cd07081 1 LDDAVAAAKVAQQ--GLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKV-IKNHFAAEYIYNVYKD--- 74 (439)
T ss_pred CHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHH-HHHHHHHHHHHHHHhc---
Confidence 4689999999999 999999999999999999999999999999999999999999875 5554443 2233222
Q ss_pred hhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHH----HcCC
Q 015020 139 KIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGV 214 (414)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~----~agl 214 (414)
...+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|. ++|+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~ 154 (439)
T cd07081 75 EKTCGVLTGDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGA 154 (439)
T ss_pred cccCceecCCCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCC
Confidence 122222232223456899999999999999999999999999999999999999999999999988888875 7799
Q ss_pred CCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHH
Q 015020 215 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 294 (414)
Q Consensus 215 P~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~ 294 (414)
|+|++|+++|.+.+.++.|+.||+|+.|.||||+. +++.++ +++||+++|+|||+|+||++|||+|.|++.++++
T Consensus 155 P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa-~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~ 229 (439)
T cd07081 155 PENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAY-SSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKS 229 (439)
T ss_pred ChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHH-hcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHH
Confidence 99999999987777899999999999999999998 455666 6889999999999999999999999999999999
Q ss_pred HhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCc-
Q 015020 295 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK- 373 (414)
Q Consensus 295 ~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~- 373 (414)
+|.|+||.|++.+|+|||+++||+|+++|.+++ ||+++..+++++.++|+++.++|++++.|+.
T Consensus 230 ~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~ 294 (439)
T cd07081 230 KTFDNGVICASEQSVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDAY 294 (439)
T ss_pred HhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCHH
Confidence 999999999999999999999999999999874 8999999999999999999999998754432
Q ss_pred c-cCCCCCeEeeE---EEeeCC--CCCcccccccccceeeEEEEec
Q 015020 374 P-IGKKGYYIEPT---IFTNVT--EDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 374 ~-~~~~g~~~~Pt---vl~~~~--~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
. ....|+|++|| ++.+++ ++|++++||+||||++|++|++
T Consensus 295 ~~~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~ 340 (439)
T cd07081 295 KIAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAAN 340 (439)
T ss_pred HHHHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCC
Confidence 1 11248899998 999988 9999999999999999999985
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-68 Score=534.45 Aligned_cols=338 Identities=25% Similarity=0.342 Sum_probs=303.8
Q ss_pred HHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhh
Q 015020 61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI 140 (414)
Q Consensus 61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~ 140 (414)
+++|++.|+++|+ .|+++|..+|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++..++..
T Consensus 1 v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~~-ev~~~~~~l~~~a~~~~~~ 77 (454)
T cd07129 1 VDAAAAAAAAAFE--SYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQG-ELGRTTGQLRLFADLVREG 77 (454)
T ss_pred ChHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHH-HHHHHHHHHHHHHHHHHhc
Confidence 4689999999999 999999999999999999999999999999999999999999885 9999999999999876542
Q ss_pred c--Cceeec-------cCCccceeeecCCceEEEEcCCchhHHh--hHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHH
Q 015020 141 H--GEVLKM-------SRALQGYTLREPIGVVGHIIPWNFPTTM--FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA 209 (414)
Q Consensus 141 ~--~~~~~~-------~~~~~~~~~~~P~Gvv~~i~p~n~P~~~--~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l 209 (414)
. +..... ..+...+++++|+|||++|+|||||+.+ .++++++||++||+||+|||+.+|.++.++++++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~ 157 (454)
T cd07129 78 SWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAI 157 (454)
T ss_pred CCccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHH
Confidence 1 111110 1123457889999999999999999988 4589999999999999999999999999998877
Q ss_pred ----HHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhC--CCcceeeecCCCCceEEcCCC-
Q 015020 210 ----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDV- 282 (414)
Q Consensus 210 ----~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~--~~~~~~~elgG~~~~iV~~da- 282 (414)
.++|+|+|++|+|+|++.+.+..|++|+.++.|+||||+.+|+.|++.++ + +++|+++|+|||||+||++|+
T Consensus 158 ~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa-~~~~~~p~~lElGG~n~~iV~~da~ 236 (454)
T cd07129 158 RAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAA-ARPEPIPFYAELGSVNPVFILPGAL 236 (454)
T ss_pred HHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhh-ccCccceeEeecCCcCcEEEeCCcc
Confidence 48899999999999977678999999999999999999999999999988 5 689999999999999999999
Q ss_pred --CHHHHHHHHHHHHhccCCCccccCCceEeecc-hHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHH
Q 015020 283 --DVNTAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE 359 (414)
Q Consensus 283 --dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~ 359 (414)
|++.+++.+++++|.|+||.|++++|||||++ ++|+|+++|.++++++++| |++++.+.+++.+.|+
T Consensus 237 ~~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~g----------~~~~~~~~~~~~~~i~ 306 (454)
T cd07129 237 AERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQ----------TMLTPGIAEAYRQGVE 306 (454)
T ss_pred hHHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCCC----------CCcChHHHHHHHHHHH
Confidence 89999999999999999999999999999999 9999999999999998754 6667777788888889
Q ss_pred HHHHc-CCEEEeCCcccCCCCCeEeeEEEeeCC---CCCcccccccccceeeEEEEec
Q 015020 360 HGKRE-GATLLTGGKPIGKKGYYIEPTIFTNVT---EDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 360 ~a~~~-Ga~v~~gg~~~~~~g~~~~Ptvl~~~~---~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++++ |+++++||... .+|+|++|||+...+ ++|+++++|+||||++|++|++
T Consensus 307 ~a~~~~ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~ 363 (454)
T cd07129 307 ALAAAPGVRVLAGGAAA-EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDD 363 (454)
T ss_pred HHHhcCCcEEEeCCCcC-CCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCC
Confidence 99998 99999999754 468999999998665 6899999999999999999986
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-68 Score=532.63 Aligned_cols=335 Identities=24% Similarity=0.277 Sum_probs=303.4
Q ss_pred HHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhh-
Q 015020 62 DLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI- 140 (414)
Q Consensus 62 ~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~- 140 (414)
++|++.|++||+ .|+++|..+|.++|+++++.|++++++|++++++|+|||. ++.. |+...+..+++++..+...
T Consensus 2 ~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~~-ev~~~i~~~~~~~~~~~~~~ 77 (442)
T cd07084 2 ERALLAADISTK--AARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFAE-NICGDQVQLRARAFVIYSYR 77 (442)
T ss_pred hHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhhh-hhcchHHHHHHHHHHHHhcc
Confidence 679999999999 9999999999999999999999999999999999999999 6654 9999999999998887643
Q ss_pred -cCcee---eccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCC-C
Q 015020 141 -HGEVL---KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV-P 215 (414)
Q Consensus 141 -~~~~~---~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~agl-P 215 (414)
..... +...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+ |
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P 157 (442)
T cd07084 78 IPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLP 157 (442)
T ss_pred ccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCC
Confidence 11111 111134578899999999999999999999999999999999999999999999999999999999998 9
Q ss_pred CCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCC-CHHHHHHHHHHH
Q 015020 216 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV-DVNTAADMALLG 294 (414)
Q Consensus 216 ~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~da-dl~~a~~~i~~~ 294 (414)
+|++++++|++. .+..|+.|++++.|+||||+++|+.|++.++ . +|+++|+|||||+||++|| |+|.+++.++++
T Consensus 158 ~g~~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~-~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~ 233 (442)
T cd07084 158 PEDVTLINGDGK-TMQALLLHPNPKMVLFTGSSRVAEKLALDAK-Q--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQD 233 (442)
T ss_pred ccceEEeeCCcH-HHHHHHcCCCCCEEEEECCHHHHHHHHHhcc-C--CcEEEeccCcCcEEECCChhhHHHHHHHHHHH
Confidence 999999999765 8999999999999999999999999999887 3 8999999999999999999 699999999999
Q ss_pred HhccCCCccccCCceEeecc-hHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHc-CCEEEeCC
Q 015020 295 ILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE-GATLLTGG 372 (414)
Q Consensus 295 ~~~~~GQ~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-Ga~v~~gg 372 (414)
+|.|+||.|++++|||||++ ++++|+++|+++++++++| ++++||++++ ++.++|++++++ |+++++||
T Consensus 234 ~~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg 304 (442)
T cd07084 234 MTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSG 304 (442)
T ss_pred HhcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCC
Confidence 99999999999999999999 9999999999999999998 6889999765 456667777788 59999999
Q ss_pred cccC------CCCCeEeeEEEeeCCCCC---cccccccccceeeEEEEec
Q 015020 373 KPIG------KKGYYIEPTIFTNVTEDM---LIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 373 ~~~~------~~g~~~~Ptvl~~~~~~~---~i~~~E~fgPv~~v~~~~~ 413 (414)
.... ..|+|++|||+.+++++| ++++||+||||++|++|++
T Consensus 305 ~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~ 354 (442)
T cd07084 305 KELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKK 354 (442)
T ss_pred cccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCC
Confidence 7521 248999999999999997 9999999999999999986
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-68 Score=491.10 Aligned_cols=375 Identities=29% Similarity=0.509 Sum_probs=345.9
Q ss_pred CCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCc
Q 015020 35 SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKL 114 (414)
Q Consensus 35 ~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~ 114 (414)
+.++++.+.|.||+.+++++.-++.|+++-|..|++|++ +|.+.+...|.+.|+.+.+.+-+|+|.+++..++|+||+
T Consensus 62 ~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQk--tW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKT 139 (583)
T KOG2454|consen 62 SDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQK--TWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKT 139 (583)
T ss_pred CCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHh--hhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCch
Confidence 456899999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred hhhhhhCcHHHHHHHHHHHHHHhhhhc-Cceeecc---CCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEE
Q 015020 115 HSWAKMGDIPGAANTLRYYAGAADKIH-GEVLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTM 190 (414)
Q Consensus 115 ~~~a~~~ev~~~~~~l~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~v 190 (414)
..+|..+||-..++-+.+.....++.. .+..|.. .....+++++|+||+..|.|||||+.+.+.+++.||.+||++
T Consensus 140 mvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaI 219 (583)
T KOG2454|consen 140 MVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAI 219 (583)
T ss_pred hhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeE
Confidence 999988899988888887765554332 2222211 235578999999999999999999999999999999999999
Q ss_pred EEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcce
Q 015020 191 IVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 266 (414)
Q Consensus 191 vlkps~~~~~~~~~l~~~l----~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~ 266 (414)
|+|-|+.+.++.....+++ ...|-|+++++++++- ++.+++|++|+.++.+.|.||..+++.|++.++ +.++|+
T Consensus 220 VvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itcl-pd~a~~ltSh~g~khitFiGSqpvak~i~~~AA-k~LTPv 297 (583)
T KOG2454|consen 220 VVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCL-PDTAEALTSHSGVKHITFIGSQPVAKMIMRNAA-KTLTPV 297 (583)
T ss_pred EEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecC-cchHhHhhcCCCcceEEEecCcHHHHHHHHhhh-hhcCcE
Confidence 9999999999887766655 4559999999999994 478999999999999999999999999999999 899999
Q ss_pred eeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccC
Q 015020 267 SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346 (414)
Q Consensus 267 ~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~ 346 (414)
++|||||+++||++|+|++..+.-++++.|..+||.|+..+|++||+++||.|+..|.+++..++.|.|.-.+.|||.|+
T Consensus 298 ~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~ 377 (583)
T KOG2454|consen 298 TLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMC 377 (583)
T ss_pred EEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 347 DKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 347 ~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+..+++.++++|++|+++||+++.||.+.. ..|.|++||+|.|++++|.|+|||.||||++++++++
T Consensus 378 s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~ 448 (583)
T KOG2454|consen 378 SQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKT 448 (583)
T ss_pred hccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCC
Confidence 999999999999999999999999998752 3589999999999999999999999999999999875
|
|
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-66 Score=519.20 Aligned_cols=348 Identities=53% Similarity=0.850 Sum_probs=326.5
Q ss_pred HHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhc
Q 015020 62 DLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141 (414)
Q Consensus 62 ~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~ 141 (414)
+++++.|+++++ .|+.++..+|.++|+++++.|.+++++|++++++|+||+..++.. |+..+++.+++++...+...
T Consensus 1 ~~av~~a~~a~~--~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~~-ei~~~i~~l~~~~~~~~~~~ 77 (432)
T cd07078 1 DAAVAAARAAFK--AWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALG-EVARAADTFRYYAGLARRLH 77 (432)
T ss_pred CHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence 368899999999 999999999999999999999999999999999999999998876 99999999999988877654
Q ss_pred Ccee-eccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEE
Q 015020 142 GEVL-KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 220 (414)
Q Consensus 142 ~~~~-~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~ 220 (414)
+... ....+...+.+++|+||+++|+|||||+...++.+++||++||+||+|||+.+|.++..+.++|.++|+|+|+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~ 157 (432)
T cd07078 78 GEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLN 157 (432)
T ss_pred CccccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEE
Confidence 4332 223456778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCC
Q 015020 221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 300 (414)
Q Consensus 221 ~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~G 300 (414)
+++|++.+.+..|..|++++.|.||||..+++.|.+.++ ++++|+++|+||+|++||++|+|++.+++.+++++|.|+|
T Consensus 158 ~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~-~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~G 236 (432)
T cd07078 158 VVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAA-ENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAG 236 (432)
T ss_pred EEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccC
Confidence 999976668899999999999999999999999999999 7899999999999999999999999999999999999999
Q ss_pred CccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC-CC
Q 015020 301 EICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KG 379 (414)
Q Consensus 301 Q~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g 379 (414)
|.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||..... .|
T Consensus 237 q~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g 316 (432)
T cd07078 237 QVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKG 316 (432)
T ss_pred CCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999976532 48
Q ss_pred CeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 380 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 380 ~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+|++|||+.+++++++++++|+||||++|++|++
T Consensus 317 ~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~ 350 (432)
T cd07078 317 YFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKD 350 (432)
T ss_pred cEEccEEEecCCCCChhhhCCCcCceEEEEEeCC
Confidence 9999999999999999999999999999999975
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-66 Score=517.42 Aligned_cols=327 Identities=20% Similarity=0.243 Sum_probs=285.9
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHh
Q 015020 58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 137 (414)
Q Consensus 58 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~ 137 (414)
-+|+++|+++|++||+ .|+++|..+|.++|+++++.|+++.++|++++++|+|||+.++. ++.++++++..
T Consensus 3 ~~~v~~av~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~-------~~~~~~~~~~~ 73 (429)
T cd07121 3 FATVDDAVAAAKAAQK--QYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK-------IAKNHLAAEKT 73 (429)
T ss_pred hhhHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-------HHHHHHHHHhc
Confidence 3689999999999999 99999999999999999999999999999999999999987663 34455555422
Q ss_pred hhhc--CceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHH----HH
Q 015020 138 DKIH--GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KL 211 (414)
Q Consensus 138 ~~~~--~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l----~~ 211 (414)
.... ........+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++ .+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~ 153 (429)
T cd07121 74 PGTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAE 153 (429)
T ss_pred CcccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHH
Confidence 1110 00000112234578899999999999999999999999999999999999999999999999999887 47
Q ss_pred cCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHH
Q 015020 212 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 291 (414)
Q Consensus 212 aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i 291 (414)
+|+|+|++|+++|.+.+.++.|++||+|+.|+||||+.+|+.|++. .+|+++|+|||||+||++|||+|.|++.+
T Consensus 154 aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~-----~k~~~lelGGk~p~iV~~dADld~Aa~~i 228 (429)
T cd07121 154 AGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS-----GKKAIGAGAGNPPVVVDETADIEKAARDI 228 (429)
T ss_pred cCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC-----CCceEeecCCCceEEEecCCCHHHHHHHH
Confidence 8999999999998766789999999999999999999999999864 48999999999999999999999999999
Q ss_pred HHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHc--CCEEE
Q 015020 292 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE--GATLL 369 (414)
Q Consensus 292 ~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~--Ga~v~ 369 (414)
++++|.|+||.|++++|||||+++||+|+++|+++ + .+++++++++++.++|+++++. |++++
T Consensus 229 ~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~------~---------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~ 293 (429)
T cd07121 229 VQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN------G---------AYVLNDEQAEQLLEVVLLTNKGATPNKKW 293 (429)
T ss_pred HhcccccCCCCCCccceEEEeHHHHHHHHHHHHHC------C---------CEEcCHHHHHHHHHhhcccCCCccccccc
Confidence 99999999999999999999999999999999886 1 1378999999999999999864 79999
Q ss_pred eCCccc---CCCCCeEe---eEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 370 TGGKPI---GKKGYYIE---PTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 370 ~gg~~~---~~~g~~~~---Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
.||... ...|.|++ |||+.+++++|++++||+||||++|++|++
T Consensus 294 ~gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~ 343 (429)
T cd07121 294 VGKDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKN 343 (429)
T ss_pred cCcCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCC
Confidence 998641 12477877 599999999999999999999999999985
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-66 Score=493.89 Aligned_cols=371 Identities=32% Similarity=0.495 Sum_probs=337.5
Q ss_pred eEcCeEeeCCCCCeEEeecCCCC-ceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 015020 25 FINGEFVDSVSGKTFETIDPRTG-EAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL 103 (414)
Q Consensus 25 ~i~g~~~~~~~~~~~~v~~P~tg-~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 103 (414)
.++|+.+. .++..+++||++- +++++|..++.+|+++|++.|.+++. .|+.+|+.+|+.+|+|++++|+.+...|
T Consensus 117 ~~~~~~~~--~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p--~W~atp~~eRAaiL~raAdlme~~m~~L 192 (769)
T COG4230 117 IVNGAPVA--GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAP--IWSATPPAERAAILERAADLMEAQMPQL 192 (769)
T ss_pred ccCCCcCC--CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCc--ccccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46666653 5678999999985 47899999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhH
Q 015020 104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183 (414)
Q Consensus 104 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~A 183 (414)
..++.+|.||+...+.. |+.+++++||||+..++.-.+ ....+|+|++++|+|||||+.++..+++.|
T Consensus 193 ~~L~~REAGKtl~naIA-EVREAVDFlrYYA~~ar~~~g-----------~~~~~~~G~vVcISPWNFPLAIFtGqiaAA 260 (769)
T COG4230 193 MGLLVREAGKTLSNAIA-EVREAVDFLRYYAGQARDTFG-----------NLTHRPLGPVVCISPWNFPLAIFTGQIAAA 260 (769)
T ss_pred HHHHHHHhccchhhHHH-HHHHHHHHHHHHHHHHhcccC-----------ccccCCCCcEEEECCCCchHHHHHhHHHHH
Confidence 99999999999999987 999999999999988764221 145789999999999999999999999999
Q ss_pred hhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCC-
Q 015020 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN- 262 (414)
Q Consensus 184 LaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~- 262 (414)
|++||+|+-||.+++|+.+..-++++.++|+|++++++++|+|..++..|+.++++++|+||||+++++.|.+..+.+.
T Consensus 261 L~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g 340 (769)
T COG4230 261 LAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQG 340 (769)
T ss_pred HHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCC
Confidence 9999999999999999999999999999999999999999999889999999999999999999999999999988433
Q ss_pred -CcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCC
Q 015020 263 -LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR 341 (414)
Q Consensus 263 -~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~ 341 (414)
..|++.|.||.|++||+.+|--++++..++.|+|..+||+|.+.+.+++++++.|..+++|+.++.++++|+|..-.+|
T Consensus 341 ~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tD 420 (769)
T COG4230 341 RPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTD 420 (769)
T ss_pred CCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceecc
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+||+|+.++.+.+.++|+..+..|-.+..-..... .+|.|+.||++.- . +-.-++.|+||||+.|++|+.
T Consensus 421 VGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El-~-~~~eL~rEVFGPVLHVvRy~~ 491 (769)
T COG4230 421 VGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIEL-E-NLDELQREVFGPVLHVVRYKR 491 (769)
T ss_pred ccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEc-C-CHHHHHHHhccceeEEEEecH
Confidence 99999999999999999999988844432222211 4699999999953 2 333468999999999999975
|
|
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-65 Score=476.59 Aligned_cols=341 Identities=27% Similarity=0.433 Sum_probs=306.2
Q ss_pred HHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhh
Q 015020 61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI 140 (414)
Q Consensus 61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~ 140 (414)
+++.++++|.+|. .-+.-|.+.|.+.|+++...+++|.+++.+++..|.+|+..++...|+...+..++++....+..
T Consensus 4 ~~~~v~~~R~~F~--sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~w 81 (477)
T KOG2456|consen 4 ISETVRRLRLAFS--SGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEW 81 (477)
T ss_pred HHHHHHHHHHHHh--cCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHh
Confidence 4556899999999 55889999999999999999999999999999999999999987778888888888777655443
Q ss_pred cC-ceee---ccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCC
Q 015020 141 HG-EVLK---MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 216 (414)
Q Consensus 141 ~~-~~~~---~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~ 216 (414)
-. +.++ .......++..+|+|||++|+|||||+.+.+.++++||+|||+||+|||+.+|.++.+|++++.++ |+.
T Consensus 82 v~~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~ 160 (477)
T KOG2456|consen 82 VKPEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQ 160 (477)
T ss_pred ccccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCc
Confidence 21 1111 112356789999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHh
Q 015020 217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 296 (414)
Q Consensus 217 g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~ 296 (414)
+++.||.|.-+++++.| .+ ++|.|+||||+.+|+.|+.+++ ++++||++|||||+|++|++|+|++-++++|+|+++
T Consensus 161 ~~~~VV~Ggv~ETt~LL-~~-rfD~IfyTGsp~VgkIim~aAa-KhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~ 237 (477)
T KOG2456|consen 161 DLIRVVNGGVPETTELL-KQ-RFDHIFYTGSPRVGKIIMAAAA-KHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKW 237 (477)
T ss_pred ceEEEecCCCchHHHHH-Hh-hccEEEecCCchHHHHHHHHHH-hcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhh
Confidence 99999999666665555 45 8999999999999999999999 999999999999999999999999999999999999
Q ss_pred ccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC
Q 015020 297 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376 (414)
Q Consensus 297 ~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~ 376 (414)
.|+||.|.++++|+++.+++++|+++++..++++. |+...++.+++.+|+..|++|+..++++- .+++.||..+
T Consensus 238 ~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eFY-G~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~d- 311 (477)
T KOG2456|consen 238 MNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEFY-GENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGESD- 311 (477)
T ss_pred ccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHHh-CCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCccc-
Confidence 99999999999999999999999999999999984 66557789999999999999999998853 4899999875
Q ss_pred CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 377 ~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
....|++||||.||++++++|+||+||||+||+.+++
T Consensus 312 ~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~ 348 (477)
T KOG2456|consen 312 ESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQS 348 (477)
T ss_pred hhhcccCCeEEecCCCCChhhhhhhccCccceeEhhh
Confidence 4466999999999999999999999999999999864
|
|
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-65 Score=513.38 Aligned_cols=329 Identities=21% Similarity=0.251 Sum_probs=285.9
Q ss_pred CCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHH
Q 015020 55 EGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 134 (414)
Q Consensus 55 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~ 134 (414)
....+|++++++.|++||. .|+.++..+|.++|+++++.|++++++|++++++|+||++.+++. ..+++++
T Consensus 32 ~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~ 102 (465)
T PRK15398 32 MGVFASVDDAVAAAKVAQQ--RYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAA 102 (465)
T ss_pred ccHHHHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHH
Confidence 3467899999999999999 999999999999999999999999999999999999999988753 2334444
Q ss_pred HHhhh---hcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHH-
Q 015020 135 GAADK---IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK- 210 (414)
Q Consensus 135 ~~~~~---~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~- 210 (414)
..... ...... ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.
T Consensus 103 ~~~~~~~~~~~~~~-~~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~ 181 (465)
T PRK15398 103 EKTPGVEDLTTEAL-TGDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNE 181 (465)
T ss_pred HHhccccccccCcc-cCCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHH
Confidence 43311 111111 1122456788999999999999999999999999999999999999999999999999999876
Q ss_pred ---HcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHH
Q 015020 211 ---LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTA 287 (414)
Q Consensus 211 ---~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a 287 (414)
++|+|+|+++++++.+.+.++.|++||++|.|+||||+.+|+.|++ ..+|+++|+|||||+||++|||+|.|
T Consensus 182 ~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~-----~~k~~~~elGGk~p~IV~~dADld~A 256 (465)
T PRK15398 182 AIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK-----SGKKAIGAGAGNPPVVVDETADIEKA 256 (465)
T ss_pred HHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH-----cCCceeeecCCCceEEEecCCCHHHH
Confidence 6899999999999866678999999999999999999999999987 25899999999999999999999999
Q ss_pred HHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCE
Q 015020 288 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 367 (414)
Q Consensus 288 ~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~ 367 (414)
++.+++++|.|+||.|++++|||||+++||+|+++|+++ + +|++++.+++++.++++++.+++++
T Consensus 257 a~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~------~---------~~li~~~~~~~v~~~l~~~~~~~~~ 321 (465)
T PRK15398 257 ARDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKN------G---------AVLLTAEQAEKLQKVVLKNGGTVNK 321 (465)
T ss_pred HHHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHc------C---------CccCCHHHHHHHHHHHhhcccccch
Confidence 999999999999999999999999999999999999986 1 2789999999999999976545667
Q ss_pred EEeCCccc---CCCCCeE---eeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 368 LLTGGKPI---GKKGYYI---EPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 368 v~~gg~~~---~~~g~~~---~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++.||... ...|+|+ +||||.+++++|++++||+||||++|++|++
T Consensus 322 ~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d 373 (465)
T PRK15398 322 KWVGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKD 373 (465)
T ss_pred hhhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCC
Confidence 88776431 1236665 4899999999999999999999999999975
|
|
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-65 Score=476.41 Aligned_cols=390 Identities=27% Similarity=0.410 Sum_probs=357.7
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH-
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE- 97 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~- 97 (414)
-.+|+.|||+.+... ..+...+|++ +..++.+..++..+++.||++|.+|+. .|..+|..+|.+|++++++++.
T Consensus 58 ~evP~vIg~~~v~t~--~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~--~W~~~PiadR~aI~lkAAdlist 133 (561)
T KOG2455|consen 58 LEVPLVIGDKEVYTN--DEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQK--TWELVPIADRLAIFLKAADLIST 133 (561)
T ss_pred eeccEEECCeeeecC--CcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcC--ccccCcHHHHHHHHHHHHHHhcc
Confidence 447899999999853 4588999998 557999999999999999999999998 9999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceee-ccCCccceeeecCC-ceEEEEcCCchhHHh
Q 015020 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPI-GVVGHIIPWNFPTTM 175 (414)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~-Gvv~~i~p~n~P~~~ 175 (414)
+++-+|........||...+|...-+.+.++++|+++..+.++...... ..++..+...++|+ |.|+.|+||||-...
T Consensus 134 kyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnftAI~ 213 (561)
T KOG2455|consen 134 KYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFTAIG 213 (561)
T ss_pred hHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecccceeeec
Confidence 7888999999999999999986523778899999999888776543322 24566778889998 999999999999999
Q ss_pred hHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHH
Q 015020 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (414)
Q Consensus 176 ~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (414)
.....+||| +||+|++|||..+.++.+++.++|+|||||+|++|+|+++++.+++.+..+|++.++.||||+.+-+.++
T Consensus 214 gnLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lw 292 (561)
T KOG2455|consen 214 GNLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLW 292 (561)
T ss_pred cccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHH
Confidence 988899999 6999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHh-----CCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhcc
Q 015020 256 QAAAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 330 (414)
Q Consensus 256 ~~~~~-----~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~ 330 (414)
+..+. ..+.+++.|+||||..+|+++||++.++...++++|.++||.|.+.+|+||+++.++.+.++|.+.-+++
T Consensus 293 k~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~ 372 (561)
T KOG2455|consen 293 KKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQL 372 (561)
T ss_pred HHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhhc
Confidence 88872 2357899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC-CCCCCCccccCCHHHHHHHHHHHHHHHHc-CCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeE
Q 015020 331 VVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKRE-GATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 408 (414)
Q Consensus 331 ~~g~p-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v 408 (414)
++||| .|.++.+||+|....++|++++|+.|+.. -.++++||..+++.|+|+.|||+...+|.+++|.||+||||++|
T Consensus 373 ~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsV 452 (561)
T KOG2455|consen 373 KIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSV 452 (561)
T ss_pred ccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEE
Confidence 99998 78899999999999999999999999863 46899999999899999999999999999999999999999999
Q ss_pred EEEecC
Q 015020 409 MKFKIS 414 (414)
Q Consensus 409 ~~~~~~ 414 (414)
+-|+.+
T Consensus 453 yvY~Dd 458 (561)
T KOG2455|consen 453 YVYEDD 458 (561)
T ss_pred EEeccc
Confidence 999764
|
|
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-65 Score=482.36 Aligned_cols=373 Identities=43% Similarity=0.781 Sum_probs=346.3
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
.....||+|+++.+++++++..+||.|+.+|++++.++..|+++|+++|+.||+.|.|++++..+|.+.|.+++++|++|
T Consensus 420 ~ph~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h 499 (881)
T KOG2452|consen 420 MPHQLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQH 499 (881)
T ss_pred CcHhhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhc
Confidence 44578999999999999999999999999999999999999999999999999988999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc----CCccceeeecCCceEEEEcCCchhHHh
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS----RALQGYTLREPIGVVGHIIPWNFPTTM 175 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (414)
+++|+.+.+++.|---.-+...-+.-.++.+||++.|.+++.+..+|.. ....+.+.++|+|||.+|.|||||+..
T Consensus 500 ~eelat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmm 579 (881)
T KOG2452|consen 500 QEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMM 579 (881)
T ss_pred cchhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHH
Confidence 9999999999999766666544566779999999999999999988743 234577899999999999999999999
Q ss_pred hHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHH
Q 015020 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (414)
Q Consensus 176 ~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (414)
+.|+.+.+|++-- +| +.+ -.|++|+++|.++-+++.|..||+++.|-||||+++|+.||
T Consensus 580 lswk~aaclaa~~---~k-----------~~e-------~sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im 638 (881)
T KOG2452|consen 580 LSWKTAACLAAQV---LK-----------FAE-------LTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIM 638 (881)
T ss_pred HHHHHHHHHHHHH---hh-----------hhh-------hcceEEEecCCcchhccccccCCccceeccccchHHHHHHH
Confidence 9999999986421 11 111 25889999999999999999999999999999999999999
Q ss_pred HHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCC
Q 015020 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (414)
Q Consensus 256 ~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 335 (414)
+.++..+.|++.+||||++|+|++.|+|+++|+..-..+.|+|-|..|++.-|+||.+++.|+|+.++.+..+++++|+|
T Consensus 639 ~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~p 718 (881)
T KOG2452|consen 639 KSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNP 718 (881)
T ss_pred HHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCc
Confidence 99997889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+|.+++-||--...|+.++-++++.+++.||++.+||++.+.+|+|++|||+++++.+|.+..||.||||+.|.+|+.
T Consensus 719 ldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d 796 (881)
T KOG2452|consen 719 LDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFAD 796 (881)
T ss_pred ccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCC
Confidence 999999999999999999999999999999999999999888999999999999999999999999999999999975
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-65 Score=508.26 Aligned_cols=328 Identities=23% Similarity=0.288 Sum_probs=290.4
Q ss_pred HHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHH-HHHHHHHHhhh
Q 015020 61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAAN-TLRYYAGAADK 139 (414)
Q Consensus 61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~-~l~~~~~~~~~ 139 (414)
+++|+++|++||+ .|+++|..+|.++|++++++|++++++|++++++|+|||+.+++..|+...++ .+++++.. .
T Consensus 1 ~~~av~~A~~A~~--~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~ 76 (436)
T cd07122 1 VDELVERARKAQR--EFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--K 76 (436)
T ss_pred ChHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--c
Confidence 4789999999999 89999999999999999999999999999999999999999987436777777 77777752 2
Q ss_pred hcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHH----HcCCC
Q 015020 140 IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVP 215 (414)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~----~aglP 215 (414)
..+. .....+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++. ++|+|
T Consensus 77 ~~g~-~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P 155 (436)
T cd07122 77 TVGV-IEEDEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAP 155 (436)
T ss_pred ceee-eccCCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCC
Confidence 2221 111223456789999999999999999999999999999999999999999999999999888764 78999
Q ss_pred CCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHH
Q 015020 216 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 295 (414)
Q Consensus 216 ~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~ 295 (414)
+|++|+++|.+.+.++.|++||+++.|+||||+.+++ .++ .+++|+++|+|||||+||++|||++.|++.+++++
T Consensus 156 ~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~----~a~-~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~ 230 (436)
T cd07122 156 EGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK----AAY-SSGKPAIGVGPGNVPAYIDETADIKRAVKDIILSK 230 (436)
T ss_pred chhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHH----HHH-hcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHh
Confidence 9999999997777899999999999999999999764 344 57899999999999999999999999999999999
Q ss_pred hccCCCccccCCceEeecchHHHHHHHHHHHHhcc-------ccCCC-CCCCCCccccCCHHHHHHHHHHHHHHHHcCCE
Q 015020 296 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW-------VVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 367 (414)
Q Consensus 296 ~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~-------~~g~p-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~ 367 (414)
|.|+||.|++++|||||+++||+|+++|+++...+ ++|++ .+.++.+||+++..+++++.++++.++.+|++
T Consensus 231 f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~ 310 (436)
T cd07122 231 TFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTK 310 (436)
T ss_pred hccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCe
Confidence 99999999999999999999999999999999887 88988 46788999999999999998888888788887
Q ss_pred EEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 368 LLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 368 v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++.|| +.+++++|+++ +|.||||++|++|++
T Consensus 311 vl~~~--------------~~~v~~~~~~~-~E~FGPVl~v~~~~~ 341 (436)
T cd07122 311 VLVAE--------------ETGVGPEEPLS-REKLSPVLAFYRAED 341 (436)
T ss_pred EEEEe--------------cCCCCCCCcch-hcccCCeEEEEEeCC
Confidence 77655 46888999987 567999999999986
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-63 Score=503.41 Aligned_cols=335 Identities=19% Similarity=0.178 Sum_probs=294.5
Q ss_pred CCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHH
Q 015020 55 EGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 134 (414)
Q Consensus 55 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~ 134 (414)
..+.+++++++++|++||+ .|++++..+|.++|+++++.|++++++|++++++|+||+..+++..+.......+.+++
T Consensus 4 ~~~~~~v~~av~~A~~A~~--~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~ 81 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQK--KLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSI 81 (488)
T ss_pred ccCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHH
Confidence 4577899999999999999 99999999999999999999999999999999999999988865312223444554444
Q ss_pred HHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHH----HHHHH
Q 015020 135 GAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF----AHLAK 210 (414)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l----~~~l~ 210 (414)
...+. .+. .....+...+..++|+|||++|+|||||+....+++++||++||+||+|||+.+|.++..+ .+++.
T Consensus 82 ~~~~~-~G~-~~~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~ 159 (488)
T TIGR02518 82 KDMKT-IGI-LSEDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAE 159 (488)
T ss_pred hhCcc-cce-ecCCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHH
Confidence 32222 222 2222345567899999999999999999999999999999999999999999999999984 55558
Q ss_pred HcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHH
Q 015020 211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 290 (414)
Q Consensus 211 ~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~ 290 (414)
++|+|+|++|++++.+.+.+..|+.||+|+.|.||||+.+++. +. ..++|+++|+|||+|+||++|||+|.|++.
T Consensus 160 eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~----a~-~~~~pv~~e~gGn~p~iV~~dADld~Aa~~ 234 (488)
T TIGR02518 160 EAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKA----AY-SSGTPAIGVGPGNGPAYIERTANVKKAVRD 234 (488)
T ss_pred HcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHH----HH-HcCCCEEEEcCCCCeEEEeCCCCHHHHHHH
Confidence 9999999999999877788999999999999999999996544 33 567999999999999999999999999999
Q ss_pred HHHHHhccCCCccccCCceEeecchHHHHHHHHHHH-------HhccccCCC-CCCCCCccccCCHHHHHHHHHHHHHHH
Q 015020 291 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK-------AKAWVVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGK 362 (414)
Q Consensus 291 i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~-------~~~~~~g~p-~~~~~~~gpl~~~~~~~~~~~~i~~a~ 362 (414)
+++++|.|+||.|++.+|||||+++||+|+++|+++ .+.+++|+| .++++++||+++.++++++.++++.++
T Consensus 235 iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av 314 (488)
T TIGR02518 235 IIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTV 314 (488)
T ss_pred HHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhcccc
Confidence 999999999999999999999999999999999998 899999996 678899999999999999999999999
Q ss_pred HcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 363 REGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 363 ~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
.+|+++++||.. .+++++++ ++|.||||++|++|++
T Consensus 315 ~~gakll~gg~~--------------~v~~~~~~-~~E~fgPVl~v~~~~~ 350 (488)
T TIGR02518 315 PEDAKVLIGEQN--------------GVGNKNPY-SREKLTTILAFYTEEN 350 (488)
T ss_pred CCCCEEEEeCCC--------------CCCCCCcc-ccCccCceEEEEEeCC
Confidence 999999999852 35778886 7999999999999985
|
|
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-61 Score=438.36 Aligned_cols=399 Identities=25% Similarity=0.469 Sum_probs=365.3
Q ss_pred CcccccccCCCCccc-cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHH
Q 015020 7 NGSCKSLFKMPEIKF-TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAER 85 (414)
Q Consensus 7 ~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R 85 (414)
+.+.-.|+|...+.. ..-..+|+|- .+|..++.++|++.++|+.|..++.+|.+.+++.|++|++ .|-.+|...|
T Consensus 4 n~~~y~flkelglte~n~gvy~gkw~--a~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~k--iw~~vpapkr 79 (507)
T KOG2453|consen 4 NDSKYGFLKELGLTENNAGVYHGKWA--ASGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYK--IWCEVPAPKR 79 (507)
T ss_pred ccchhHHHHHhCCcccccceeeeeec--cCCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHH--HHhcCCCCcc
Confidence 344456677666633 2234556996 4778999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecCCceEE
Q 015020 86 RGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVG 164 (414)
Q Consensus 86 ~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~ 164 (414)
.++.+++.+.|++..+-|-+++++|+||...+... |+++-++.+.|...+.+.+.+..+|.. ++....-.|.|+|+|.
T Consensus 80 geivrqigdalr~klq~lg~lvslemgkilaegvg-evqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vg 158 (507)
T KOG2453|consen 80 GEIVRQIGDALRTKLQNLGKLVSLEMGKILAEGVG-EVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVG 158 (507)
T ss_pred chHHHHHHHHHHHHHHHHhhhhhhhhhhHhhhcch-hHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEE
Confidence 99999999999999999999999999999999985 999999999999999999988888865 4444566899999999
Q ss_pred EEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHH----HHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcC
Q 015020 165 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH----LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDID 240 (414)
Q Consensus 165 ~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~----~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~ 240 (414)
+|+.||||....-|.-+-|+.+||+|++||++.+|+++....+ .|.+--+|.+..+..+| +.+.+.++..+.+++
T Consensus 159 vitafnfpcavygwnnaiaMv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG-~aDigrAaakdgRvn 237 (507)
T KOG2453|consen 159 VITAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVN 237 (507)
T ss_pred EEEeccCCceeeccCchhhhhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc-chhhhhhccccCcee
Confidence 9999999999999999999999999999999999988766554 45555789999999999 568999999999999
Q ss_pred EEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHH
Q 015020 241 KVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320 (414)
Q Consensus 241 ~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~ 320 (414)
.+.||||+++++.+.+... .++.+..+||||+|+.||.+|||+..++...++++...+||+|+..+|++||+++||+++
T Consensus 238 lvsftGssQvgKsvgq~vq-arfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vl 316 (507)
T KOG2453|consen 238 LVSFTGSSQVGKSVGQQVQ-ARFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVL 316 (507)
T ss_pred ecccccchhhhhHHHHHHH-HHhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHH
Confidence 9999999999999998887 677889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccc
Q 015020 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNE 400 (414)
Q Consensus 321 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E 400 (414)
++|+...+++++|+|+|+.+-+||+.++++..+.+.-|+++++.|.++++||+..+.+|+|+.|||++ ..+|.+++.+|
T Consensus 317 erlkkayaq~~ignpld~ntl~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~e 395 (507)
T KOG2453|consen 317 ERLKKAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRE 395 (507)
T ss_pred HHHHHHHHheecCCcCCCCceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhh
Confidence 99999999999999999999999999999999999999999999999999999888899999999997 89999999999
Q ss_pred cccceeeEEEEec
Q 015020 401 IFGPVMALMKFKI 413 (414)
Q Consensus 401 ~fgPv~~v~~~~~ 413 (414)
.|.||++|.+|++
T Consensus 396 tfapilyvlkf~~ 408 (507)
T KOG2453|consen 396 TFAPILYVLKFST 408 (507)
T ss_pred hccceeeEEeccc
Confidence 9999999999975
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-59 Score=504.32 Aligned_cols=337 Identities=21% Similarity=0.260 Sum_probs=288.0
Q ss_pred EEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHH
Q 015020 52 RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLR 131 (414)
Q Consensus 52 ~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~ 131 (414)
+....+.+|++++|++|++||+ .|+++|.++|.++|+++++.|++++++|++++++|+|||..+++..+...++..++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~ 82 (862)
T PRK13805 5 EMAVTNVAELDALVEKAKKAQE--EFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIY 82 (862)
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHH
Confidence 3456789999999999999999 99999999999999999999999999999999999999998876323333444443
Q ss_pred HHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHH-
Q 015020 132 YYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK- 210 (414)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~- 210 (414)
++.. .++..+. .........+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.
T Consensus 83 ~~~~-~~~~~g~-~~~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~ 160 (862)
T PRK13805 83 NSYK-DEKTVGV-IEEDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLD 160 (862)
T ss_pred HHhc-CCCcccc-cCcCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHH
Confidence 3332 1111121 111223456788999999999999999999999999999999999999999999999999888875
Q ss_pred ---HcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHH
Q 015020 211 ---LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTA 287 (414)
Q Consensus 211 ---~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a 287 (414)
++|+|+|++|+++|.+.+.+..|++|+++|.|+||||+.++ +.++ .+++|+++|+|||||+||++|||++.|
T Consensus 161 ~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~-~~~~pv~~e~gGk~p~iV~~dADl~~A 235 (862)
T PRK13805 161 AAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAY-SSGKPALGVGAGNVPAYIDKTADIKRA 235 (862)
T ss_pred HHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHH-hcCCCeEEECCCCCeEEEeCCCCHHHH
Confidence 68999999999998777789999999999999999999965 3444 678999999999999999999999999
Q ss_pred HHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCE
Q 015020 288 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 367 (414)
Q Consensus 288 ~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~ 367 (414)
++.+++++|.|+||.|+++++||||++++|+|+++|+++. +|++++.+++++.++|+++++.|++
T Consensus 236 a~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g---------------~~l~~~~~~~~v~~~i~~a~~~~~~ 300 (862)
T PRK13805 236 VNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASHG---------------AYFLNKKELKKLEKFIFGKENGALN 300 (862)
T ss_pred HHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHhC---------------CeeCCHHHHHHHHHHHhhccCCCcC
Confidence 9999999999999999999999999999999999998861 5899999999999999998766654
Q ss_pred E-EeCCccc---CCCCCeEeeEE------EeeCCCCCcccccccccceeeEEEEec
Q 015020 368 L-LTGGKPI---GKKGYYIEPTI------FTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 368 v-~~gg~~~---~~~g~~~~Ptv------l~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
. +.||... ...|+|++||+ +.+++++|++++ |.||||++|++|++
T Consensus 301 ~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~ 355 (862)
T PRK13805 301 ADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKD 355 (862)
T ss_pred ccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECC
Confidence 3 4566421 12488899997 678999999887 79999999999975
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-59 Score=464.45 Aligned_cols=299 Identities=21% Similarity=0.242 Sum_probs=257.6
Q ss_pred HHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchh----hhhh-------CcHHHHHHHHH
Q 015020 63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS----WAKM-------GDIPGAANTLR 131 (414)
Q Consensus 63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~-------~ev~~~~~~l~ 131 (414)
..+++|+++|+ .|+++|..+|.++|+++++.|++++++|++++++|+||+.. ++.. .|+..+++.++
T Consensus 2 ~~~~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~ 79 (406)
T cd07079 2 ELAKRAKAASR--ALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLR 79 (406)
T ss_pred hHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHH
Confidence 46788999999 99999999999999999999999999999999777766643 2321 27889999999
Q ss_pred HHHHHhhhhcCceeec---cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHH
Q 015020 132 YYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 208 (414)
Q Consensus 132 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~ 208 (414)
+++...+. .+...+. ..+...+++++|+|||++|+|| +| ...++++++||++||+||+|||+.+|.++..++++
T Consensus 80 ~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~ 156 (406)
T cd07079 80 QVAALPDP-VGEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEI 156 (406)
T ss_pred HHHhcCCC-CcccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHH
Confidence 99876543 2322221 1233567899999999999996 56 67889999999999999999999999999999999
Q ss_pred HH----HcCCCCCcEEEEeCCch-hHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCC
Q 015020 209 AK----LAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVD 283 (414)
Q Consensus 209 l~----~aglP~g~~~~v~g~~~-~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dad 283 (414)
+. ++|+|+|++|+++|.+. ..++.|.+||++|.|+||||+.+|+.|++.+ ++|+++|||||||+||++|||
T Consensus 157 ~~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a----~~pv~lELGGk~p~IV~~dAD 232 (406)
T cd07079 157 IQEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA----TIPVIKHGDGNCHVYVDESAD 232 (406)
T ss_pred HHHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc----CCCEEeecCCcceEEEeCCCC
Confidence 86 89999999999998543 5788899999999999999999999998765 599999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHH
Q 015020 284 VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR 363 (414)
Q Consensus 284 l~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 363 (414)
+|.|++.+++++|.|+| .|++++|||||+++||+|+++|+++++++
T Consensus 233 l~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~~--------------------------------- 278 (406)
T cd07079 233 LEMAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALREA--------------------------------- 278 (406)
T ss_pred HHHHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHHC---------------------------------
Confidence 99999999999999999 99999999999999999999999988752
Q ss_pred cCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 364 EGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 364 ~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
|++++ ||... ..|++|| ++++|++++||+||||++|++|++
T Consensus 279 -ga~~~-~g~~~---~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~ 319 (406)
T cd07079 279 -GVELR-GDEET---LAILPGA----KPATEEDWGTEYLDLILAVKVVDS 319 (406)
T ss_pred -CCEEe-cCHHH---HHhcccc----cCCCcchhhhhhhCceeEEEEeCC
Confidence 56754 43321 1378888 789999999999999999999985
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-59 Score=463.72 Aligned_cols=304 Identities=22% Similarity=0.272 Sum_probs=261.4
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchh----hhhh-------CcHHHH
Q 015020 58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS----WAKM-------GDIPGA 126 (414)
Q Consensus 58 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~-------~ev~~~ 126 (414)
.+|++++++.|+++|+ .|+++|..+|.++|+++++.|++|+++|++++++|+||+.. +++. .|+..+
T Consensus 3 ~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~ 80 (417)
T PRK00197 3 MEYLEELGRRAKAASR--KLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGI 80 (417)
T ss_pred hhHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHH
Confidence 3689999999999999 99999999999999999999999999999999988877743 3321 278889
Q ss_pred HHHHHHHHHHhhhhcCceeec---cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHH
Q 015020 127 ANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203 (414)
Q Consensus 127 ~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~ 203 (414)
++.+++++.+++.. +...+. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++.
T Consensus 81 ~~~~~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~ 157 (417)
T PRK00197 81 AEGLRQVAALPDPV-GEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNR 157 (417)
T ss_pred HHHHHHHhhcCCCc-cccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHH
Confidence 99999998876543 333221 12335788999999999999986 4 678899999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCcEEEEeCCc-hhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEE
Q 015020 204 YFAHLA----KLAGVPDGVLNVVPGFG-PTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278 (414)
Q Consensus 204 ~l~~~l----~~aglP~g~~~~v~g~~-~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV 278 (414)
++++++ .++|+|+|++|+++|.+ .+.+..|..|++++.|+||||+.+|+.|++.+ ++|+++|||||||+||
T Consensus 158 ~l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a----~~~~~lELGGk~p~IV 233 (417)
T PRK00197 158 ALVAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA----TVPVIEHGDGICHIYV 233 (417)
T ss_pred HHHHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc----CCCEEeecCCcceEEE
Confidence 998885 68899999999999644 45788899999999999999999999999864 5999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHH
Q 015020 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYI 358 (414)
Q Consensus 279 ~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i 358 (414)
++|||+|.|++.+++++|.|+| .|++++|+|||+++||+|+++|++++++++++
T Consensus 234 ~~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------- 287 (417)
T PRK00197 234 DESADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE------------------------- 287 (417)
T ss_pred eCCCCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe-------------------------
Confidence 9999999999999999999999 99999999999999999999999999988532
Q ss_pred HHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 359 EHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 359 ~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++ ||... .+ |+ |||+ +++|++++||+||||++|++|++
T Consensus 288 ---------~~-~~~~~--~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~ 325 (417)
T PRK00197 288 ---------LR-GDEAA--LA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDS 325 (417)
T ss_pred ---------Ee-cCHHH--HH-hh-cccc---cCCcchhhhhhhCceEEEEEeCC
Confidence 11 11110 12 33 9998 46899999999999999999985
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-57 Score=472.03 Aligned_cols=299 Identities=21% Similarity=0.229 Sum_probs=263.1
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHhC--Cchhhhh---hCcHHHHH
Q 015020 59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLE------ALDAG--KLHSWAK---MGDIPGAA 127 (414)
Q Consensus 59 ~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~------~~e~G--k~~~~a~---~~ev~~~~ 127 (414)
+++++++++|++||+ .|+++|..+|.++|+++++.|++++++|++++ ++|+| ||+.+++ ..|+..++
T Consensus 294 ~~~~~~~~aA~~A~~--~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~ 371 (718)
T PLN02418 294 VGAREMAVAARESSR--KLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLA 371 (718)
T ss_pred HHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHH
Confidence 359999999999999 89999999999999999999999999999996 77999 8887763 23899999
Q ss_pred HHHHHHHHHhhhhcCceee---ccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHH
Q 015020 128 NTLRYYAGAADKIHGEVLK---MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 204 (414)
Q Consensus 128 ~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~ 204 (414)
+.+++++... ...+...+ ...+...++.++|+|||++|+||| |+.+. ++++|||++||+||+|||+.+|+++..
T Consensus 372 ~~~~~~a~~~-~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~ 448 (718)
T PLN02418 372 ASIRQLADME-DPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAI 448 (718)
T ss_pred HHHHHHhcCc-cccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHH
Confidence 9999999873 33343332 122334678999999999999999 99999 899999999999999999999999999
Q ss_pred HHHHHHHcCCCCCc----EEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcC
Q 015020 205 FAHLAKLAGVPDGV----LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280 (414)
Q Consensus 205 l~~~l~~aglP~g~----~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~ 280 (414)
|++++.++ +|+|+ +|+|+| +.+++..|..||+++.|+||||+.. +++.++ ..+||+++|+|||||+||++
T Consensus 449 l~~l~~eA-lP~gv~~~v~nvv~g-~~~~g~~L~~~~~v~~V~FTGSt~~---i~~~aa-~~~k~v~lELGGk~p~iV~~ 522 (718)
T PLN02418 449 LHKVITDA-IPKTVGGKLIGLVTS-RDEIPDLLKLDDVIDLVIPRGSNKL---VSQIKA-STKIPVLGHADGICHVYVDK 522 (718)
T ss_pred HHHHHHHH-ccccCCcceEEEeCC-cHHHHHHHhhCCCCCEEEEeCCHHH---HHHHHH-hcCCCEEEeCCCcceEEEeC
Confidence 99999999 99996 999998 5578999999999999999999964 444455 57899999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHH
Q 015020 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH 360 (414)
Q Consensus 281 dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~ 360 (414)
|||++.|++.+++++|.| ||.|++++|+|||+++||+ | .+.++|++
T Consensus 523 DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~------------------------G---------~~~~~i~~ 568 (718)
T PLN02418 523 SADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN------------------------G---------GLNDLLVA 568 (718)
T ss_pred CCCHHHHHHHHHHHhCCC-CCccccCcEEEEecccccc------------------------c---------cHHHHHHH
Confidence 999999999999999999 9999999999999999997 2 35889999
Q ss_pred HHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 361 GKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 361 a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
|+++||++ +||.+. .| +|. + ++|++++||+||||++|.+|++
T Consensus 569 a~~~Ga~l-~Gg~~~--~g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~ 610 (718)
T PLN02418 569 LRSAGVTL-YGGPRA--SK------LLN-I-PEAQSFHHEYSSLACTVEIVDD 610 (718)
T ss_pred HHHCCCEE-ECCccc--cC------eeC-C-CCchhhhCCcCCeeEEEEEECC
Confidence 99999999 688653 24 243 4 8899999999999999999985
|
|
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-57 Score=445.90 Aligned_cols=297 Identities=20% Similarity=0.188 Sum_probs=252.9
Q ss_pred HHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHhCCch------hhhhhCcHHHHHHHHHHHHH
Q 015020 68 ARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVL------EALDAGKLH------SWAKMGDIPGAANTLRYYAG 135 (414)
Q Consensus 68 A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~------~~~e~Gk~~------~~a~~~ev~~~~~~l~~~~~ 135 (414)
|++||+ .|+++|..+|.++|++++++|++|+++|+++ +++|+|||. .++.. |+..+++.++++++
T Consensus 1 a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~-ev~~~~~~~~~~a~ 77 (398)
T TIGR00407 1 AKQAAN--ILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEG-RLKGIADGVKDVIE 77 (398)
T ss_pred ChhHHH--HHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHH-HHHHHHHHHHHHhc
Confidence 467888 8999999999999999999999999999999 999999994 23454 89999999999998
Q ss_pred HhhhhcCceeec---cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHH----
Q 015020 136 AADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL---- 208 (414)
Q Consensus 136 ~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~---- 208 (414)
.++.. +...+. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..++++
T Consensus 78 ~a~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~a 154 (398)
T TIGR00407 78 LADPV-GKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDA 154 (398)
T ss_pred CCCCC-cccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHH
Confidence 87653 433332 23456788999999999999997 6 66889999999999999999999999999999999
Q ss_pred HHHcCCCCCcEEEEeCCc-hhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHH
Q 015020 209 AKLAGVPDGVLNVVPGFG-PTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTA 287 (414)
Q Consensus 209 l~~aglP~g~~~~v~g~~-~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a 287 (414)
|.++|+|+|++|+|+|.+ .++++.|..||+++.|+||||+.+|+.+++. ..+|+++|+|||||+||++|||+|.|
T Consensus 155 l~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~----~~~~~~~e~gGk~p~iV~~dADl~~A 230 (398)
T TIGR00407 155 LAQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT----STIPVLGHGDGICHIYLDESADLIKA 230 (398)
T ss_pred HHHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh----CCCCEEEecCCcceEEEeCCCCHHHH
Confidence 559999999999999844 4578899999999999999999999988764 34899999999999999999999999
Q ss_pred HHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCE
Q 015020 288 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 367 (414)
Q Consensus 288 ~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~ 367 (414)
++.+++++|.+ ||.|++++|+|||+++||+|+++|++++.++++ .+++ .+.+.++++. |
T Consensus 231 a~~iv~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~--------~~~~------~~~i~~~v~~----g-- 289 (398)
T TIGR00407 231 IKVIVNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV--------TIHA------DAYALKLLEL----G-- 289 (398)
T ss_pred HHHHHhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC--------EEec------CHHHHHHHhc----c--
Confidence 99999999975 999999999999999999999999999987643 1222 1334444331 1
Q ss_pred EEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 368 LLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 368 v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
| ||++ ++ +|++++||+||||++|++|++
T Consensus 290 ----~-----------~tv~-~~--~~~i~~eE~FgPvl~v~~~~~ 317 (398)
T TIGR00407 290 ----P-----------ATEA-IV--CKTDFDKEFLSLDLSVKIVES 317 (398)
T ss_pred ----C-----------cccc-cc--ccccccchhhCceeEEEEECC
Confidence 1 3554 33 378999999999999999986
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-56 Score=442.25 Aligned_cols=293 Identities=20% Similarity=0.207 Sum_probs=262.4
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhh------h----CcHHHHHHHHHHHHHH
Q 015020 67 AARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK------M----GDIPGAANTLRYYAGA 136 (414)
Q Consensus 67 ~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~------~----~ev~~~~~~l~~~~~~ 136 (414)
+|++||+ .|+++|..+|.++|+++++.|++++++|++++++|+|||+.+.. . .|+..+++.+++++..
T Consensus 2 ~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~ 79 (397)
T cd07077 2 SAKNAQR--TLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITAS 79 (397)
T ss_pred hHHHHHH--HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHh
Confidence 5888998 89999999999999999999999999999999999999975432 1 2788889999998876
Q ss_pred hhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHc---C
Q 015020 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA---G 213 (414)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~a---g 213 (414)
..+..+...+. ....+++++|+|||++|+|||||+. .++++++||++||+||+|||+.+|+++.++.+++.++ |
T Consensus 80 ~~~~~~~~~~~--~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g 156 (397)
T cd07077 80 VGHIQDVLLPD--NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAH 156 (397)
T ss_pred cCcccceEecC--CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcC
Confidence 55444333222 3457899999999999999999999 9999999999999999999999999999999999887 9
Q ss_pred CCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHH
Q 015020 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 293 (414)
Q Consensus 214 lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~ 293 (414)
+|+++++++++.+.+.+..|+.|+++|.|+||||+.+++.+++.+. ++|+++|+||++++||++|||++.|++.+++
T Consensus 157 ~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~---~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~ 233 (397)
T cd07077 157 GPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP---HIPVIGFGAGNSPVVVDETADEERASGSVHD 233 (397)
T ss_pred CCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC---CCceEEecCCcceEEEcCCCCHHHHHHHHHH
Confidence 9999999999877778999999999999999999999999987663 5899999999999999999999999999999
Q ss_pred HHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCc
Q 015020 294 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 373 (414)
Q Consensus 294 ~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~ 373 (414)
++|.| ||.|+++++||||++++|+|+++|++++.. +|++++.||.
T Consensus 234 ~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~g~~ 278 (397)
T cd07077 234 SKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQETK 278 (397)
T ss_pred hhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCCCce
Confidence 99999 999999999999999999999999998865 5777777663
Q ss_pred ccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 374 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 374 ~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++|+.|| ++|+++++|+||||++|++|++
T Consensus 279 -----~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~ 307 (397)
T cd07077 279 -----PLSKETT------PSFDDEALESMTPLECQFRVLD 307 (397)
T ss_pred -----eeEEecc------CCCChhhhhhhCceeEEEEEcc
Confidence 4677786 7899999999999999999975
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-53 Score=416.08 Aligned_cols=283 Identities=52% Similarity=0.830 Sum_probs=265.3
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceee
Q 015020 67 AARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK 146 (414)
Q Consensus 67 ~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~ 146 (414)
+|++++. .|+.++..+|.++|+++++.|.+++++|++++++|+|||..+++. |+...++.+++++...+...+...+
T Consensus 2 ~a~~a~~--~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~-ev~~~~~~l~~~~~~~~~~~~~~~~ 78 (367)
T cd06534 2 AARAAFK--AWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALG-EVARAIDTFRYAAGLADKLGGPELP 78 (367)
T ss_pred hHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccc
Confidence 5788898 899999999999999999999999999999999999999999987 9999999999999888766442222
Q ss_pred -ccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 015020 147 -MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 225 (414)
Q Consensus 147 -~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~ 225 (414)
...+...+.+++|+||+++|.|||+|+...++.+++||++||+||+|||+.+|.++..|.++|.++|+|+|++++++|+
T Consensus 79 ~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~ 158 (367)
T cd06534 79 SPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGG 158 (367)
T ss_pred ccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcC
Confidence 2345668899999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred chhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCcccc
Q 015020 226 GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA 305 (414)
Q Consensus 226 ~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a 305 (414)
+.+.+..|..|+++|.|.||||+++++.|.+.++ ++++|+++|+||+|++||++|+|++.|++.+++++|.++||.|++
T Consensus 159 ~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~-~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s 237 (367)
T cd06534 159 GDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAA-ENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTA 237 (367)
T ss_pred chhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh-cCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCC
Confidence 7668899999999999999999999999999999 778999999999999999999999999999999999999999999
Q ss_pred CCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeE
Q 015020 306 SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPT 385 (414)
Q Consensus 306 ~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Pt 385 (414)
+++||||++++++|+++|+ |
T Consensus 238 ~~~v~v~~~~~~~f~~~l~------------------------------------------------------------t 257 (367)
T cd06534 238 ASRLLVHESIYDEFVEKLV------------------------------------------------------------T 257 (367)
T ss_pred CcEEEEcHHHHHHHHHhhc------------------------------------------------------------e
Confidence 9999999999999999998 7
Q ss_pred EEeeCCCCCcccccccccceeeEEEEec
Q 015020 386 IFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 386 vl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
|+.+++++++++++|+||||++|++|++
T Consensus 258 l~~~~~~~~~~~~~E~fgPv~~v~~~~~ 285 (367)
T cd06534 258 VLVDVDPDMPIAQEEIFGPVLPVIRFKD 285 (367)
T ss_pred eeeCCCCCCccccCCccCceEEEEecCC
Confidence 7888899999999999999999999975
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-53 Score=442.16 Aligned_cols=296 Identities=19% Similarity=0.185 Sum_probs=251.0
Q ss_pred HHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhC---------------cHH
Q 015020 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG---------------DIP 124 (414)
Q Consensus 60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~---------------ev~ 124 (414)
+++..+++|++||+ .|+.+|..+|.++|+++++.|++++++|+ .++||++.+++.. |+.
T Consensus 287 ~~~~~~~~A~~A~~--~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~ 360 (715)
T TIGR01092 287 GERDMAVAARESSR--MLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKIS 360 (715)
T ss_pred HHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHH
Confidence 37888999999999 99999999999999999999999999996 5888888877641 367
Q ss_pred HHHHHHHHHHHHhhhhcCceeec---cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHH
Q 015020 125 GAANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201 (414)
Q Consensus 125 ~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~ 201 (414)
.+++.++++++. ....+...+. ..+...+.+++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+|.+
T Consensus 361 ~~~~~l~~~a~~-~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t 437 (715)
T TIGR01092 361 SLAISLRQLAAM-EDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARS 437 (715)
T ss_pred HHHHHHHHHhcC-CCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHH
Confidence 788888888873 3222322211 12334567899999999999999 9999 6899999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCC----cEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceE
Q 015020 202 ALYFAHLAKLAGVPDG----VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (414)
Q Consensus 202 ~~~l~~~l~~aglP~g----~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~i 277 (414)
+.+|++++.++ +|+| +++++++ +++.++.|..|+++|+|+||||+.+|+.|++.++ +|+++|+|||||+|
T Consensus 438 ~~~l~~l~~~a-lp~g~~~~~~~~v~~-~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~----~pv~lElgGk~p~i 511 (715)
T TIGR01092 438 NAILHKVITEA-IPIHVGKKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK----IPVLGHADGICHVY 511 (715)
T ss_pred HHHHHHHHHHH-cCCCCCCcEEEEeCC-hHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC----CCEEEEcCCcceEE
Confidence 99999999999 9987 6899985 5677889999999999999999999999998864 99999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHH
Q 015020 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357 (414)
Q Consensus 278 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~ 357 (414)
|++|||++.|++.++.++|.+ ||.|++++|||||++++|+ | .+.++
T Consensus 512 V~~dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~-------------------------~--------~~~~~ 557 (715)
T TIGR01092 512 VDKSASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN-------------------------G--------LLDDL 557 (715)
T ss_pred ECCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc-------------------------h--------hHHHH
Confidence 999999999987777777666 9999999999999999984 1 26788
Q ss_pred HHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 358 IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 358 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++.++++|++++ ||.+. .+ |+. ..+++|++++||+||||++|++|++
T Consensus 558 v~~~~~~Ga~l~-Gg~~~--~~-~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~ 604 (715)
T TIGR01092 558 IDMLRTEGVTIH-GGPRF--AA-YLT-----FNISETKSFRTEYSSLACTVEIVDD 604 (715)
T ss_pred HHHHHHCCCEEE-CCcch--hh-eec-----cCCCCchhhhccccCceEEEEEECC
Confidence 888888999985 88643 22 432 2367999999999999999999985
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=279.54 Aligned_cols=269 Identities=17% Similarity=0.185 Sum_probs=209.5
Q ss_pred CHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH----HhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHH-
Q 015020 57 DKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE----EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLR- 131 (414)
Q Consensus 57 ~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~----~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~- 131 (414)
+..++++.+...+...+ ....++.++..+.+.++++.+. ..+.+..+.+...+|.+....+. .+......++
T Consensus 3 ~~~~~~~~~~~l~~~~~--~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~-a~~~l~~~~~r 79 (422)
T cd07080 3 SAPDLDALIEELRLNRR--ALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLRE-GLKRLMALFRR 79 (422)
T ss_pred CHHHHHHHHHHHHhhHH--hHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHH-HHHHHHHHcCH
Confidence 34556666666665444 5667888888888888888775 35566677777778887665543 4444444443
Q ss_pred -HHHHHhh-hhc-Cceee--ccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHH
Q 015020 132 -YYAGAAD-KIH-GEVLK--MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 206 (414)
Q Consensus 132 -~~~~~~~-~~~-~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~ 206 (414)
..-.... .+. ...+. ...+...+++++|+|++++|+|||||+ ..++.+++||++||++|+|||+.+|.++..|.
T Consensus 80 ~~l~~~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~ 158 (422)
T cd07080 80 ENLERILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALL 158 (422)
T ss_pred HHHHHHHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHH
Confidence 1111111 111 00111 111456688999999999999999999 79999999999999999999999999999999
Q ss_pred HHHHHcCCCC----CcEEEE--eCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCc-eEEc
Q 015020 207 HLAKLAGVPD----GVLNVV--PGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP-LLIF 279 (414)
Q Consensus 207 ~~l~~aglP~----g~~~~v--~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~-~iV~ 279 (414)
++|.++ +|+ +.++++ +|++.++++.|..++ |.|+||||+++++.|++.++ .+ +.++|+|||++ +|+.
T Consensus 159 ~~l~~~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~-~~--~~~Le~Ggk~s~~vi~ 232 (422)
T cd07080 159 RSLADV-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLP-PG--CRLIDFGPKYSFAVID 232 (422)
T ss_pred HHHHhc-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCC-CC--CeeeecCCceeEEEec
Confidence 999999 787 888888 465556888898887 99999999999999999887 55 56999999955 5555
Q ss_pred CCC----CHHHHHHHHHHHHhccCCCccccCCceEeecch---HHHHHHHHHHHHhccccCCC
Q 015020 280 DDV----DVNTAADMALLGILFNKGEICVASSRVYVQEGI---YDEFEKKLVEKAKAWVVGDP 335 (414)
Q Consensus 280 ~da----dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i---~~~f~~~l~~~~~~~~~g~p 335 (414)
+++ |++.+++.+++++|.|+||.|+|+++||||+++ +++|.++|.++++++.-..|
T Consensus 233 ~~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p 295 (422)
T cd07080 233 REALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYP 295 (422)
T ss_pred HHhhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCC
Confidence 568 999999999999999999999999999999999 99999999999998754333
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.3e-22 Score=187.77 Aligned_cols=262 Identities=20% Similarity=0.264 Sum_probs=212.4
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH------hCCchhhhhh-----CcHHHHH
Q 015020 59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALD------AGKLHSWAKM-----GDIPGAA 127 (414)
Q Consensus 59 ~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e------~Gk~~~~a~~-----~ev~~~~ 127 (414)
.++.+..+.|++|.. ..+.++..+|.+.|..+++.|++++++|.++..+| +|.+...... .-+...+
T Consensus 3 ~~~~~~~~~Ak~A~~--~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma 80 (417)
T COG0014 3 SELEELGKRAKAASR--KLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMA 80 (417)
T ss_pred hHHHHHHHHHHHHHH--HHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHH
Confidence 456777888999988 89999999999999999999999999999877655 3433221100 0133444
Q ss_pred HHHHHHHHHhhhhcCce--eeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHH
Q 015020 128 NTLRYYAGAADKIHGEV--LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 205 (414)
Q Consensus 128 ~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l 205 (414)
+.++..+.+.+++.... .....|-..+.++.|+||+++| |..-...+.....-+|.+||+||+|.+..+..++..|
T Consensus 81 ~gl~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai 158 (417)
T COG0014 81 DGLRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAI 158 (417)
T ss_pred HHHHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHH
Confidence 45555554444331111 1123567788899999999999 7776778888888999999999999999999999888
Q ss_pred HHHH----HHcCCCCCcEEEEeCCc-hhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcC
Q 015020 206 AHLA----KLAGVPDGVLNVVPGFG-PTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280 (414)
Q Consensus 206 ~~~l----~~aglP~g~~~~v~g~~-~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~ 280 (414)
++++ .++|+|++.+|+++..+ ..+.+.|.....+|.|.-.||...-+.+.+.+. .||+-.+-|+|.++|+.
T Consensus 159 ~~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~----vPVi~~~~G~CHiyvd~ 234 (417)
T COG0014 159 VEVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENAT----VPVIEHGVGNCHIYVDE 234 (417)
T ss_pred HHHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCc----CCEEecCcceEEEEecc
Confidence 7775 56799999999998743 345666677888999999999999888887765 89999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhc
Q 015020 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA 329 (414)
Q Consensus 281 dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~ 329 (414)
+||+|.|.+-++.++....+ .|++.+.++||+.+.++|+.+|.+.+..
T Consensus 235 ~ADld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~ 282 (417)
T COG0014 235 SADLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQE 282 (417)
T ss_pred cCCHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHh
Confidence 99999999999999999988 9999999999999999999999999875
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=9e-18 Score=153.44 Aligned_cols=255 Identities=23% Similarity=0.274 Sum_probs=194.0
Q ss_pred HHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHhCCchhhhhh-----CcHHHHHHH
Q 015020 61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLE------ALDAGKLHSWAKM-----GDIPGAANT 129 (414)
Q Consensus 61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~------~~e~Gk~~~~a~~-----~ev~~~~~~ 129 (414)
+++..+.||++++ .++.++.++|.++|+++++.|..+..++.++. +.+.|.....-.. +-+......
T Consensus 2 ~e~~a~~aR~a~r--~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g 79 (433)
T KOG4165|consen 2 VEEMAENAREAGR--ILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAG 79 (433)
T ss_pred HHHHHHHHHHHhh--HHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHH
Confidence 3556678899998 89999999999999999999998877776643 3455532221110 012233334
Q ss_pred HHHHHHHhhhhcCcee---eccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHH
Q 015020 130 LRYYAGAADKIHGEVL---KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 206 (414)
Q Consensus 130 l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~ 206 (414)
++..++.-+ ..+... ....+-.-+....|+||.++| |..-.-.+..-..-|++.||.+++|....+..+...|.
T Consensus 80 ~~~ia~~ed-pvGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~ 156 (433)
T KOG4165|consen 80 LRQIAELED-PVGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALH 156 (433)
T ss_pred HHHHHhccc-chhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHH
Confidence 444444222 122221 123455667788999999999 55544455555567899999999999999999988888
Q ss_pred HHHHHc----CCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCC
Q 015020 207 HLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV 282 (414)
Q Consensus 207 ~~l~~a----glP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~da 282 (414)
++..++ |.|.+.+++|... .++.+.|..+..||.|.-.||+..-+.|..... .||.-+-.|.+.++|++||
T Consensus 157 ~~v~~al~~~~~~~~aV~LV~sR-Eev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tk----IPVLGHA~GichvYvd~da 231 (433)
T KOG4165|consen 157 KLVQEALGTHGGPGKAVQLVTSR-EEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTK----IPVLGHAEGICHVYVDKDA 231 (433)
T ss_pred HHHHHHhhhccCchhhhhheecH-HHHHHHhhhhhheeEEecCCcHHHHHHHhhccc----CcccccccceeEEEecccc
Confidence 877665 6789999999984 478888888899999999999999999876543 8999999999999999999
Q ss_pred CHHHHHHHHHHHHhccCCCccccCCceEeecc-----hHHHHHHHHHHH
Q 015020 283 DVNTAADMALLGILFNKGEICVASSRVYVQEG-----IYDEFEKKLVEK 326 (414)
Q Consensus 283 dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-----i~~~f~~~l~~~ 326 (414)
|+++|.+-+..+++.+.. .|++.+.+++|++ ++++++..|++.
T Consensus 232 d~~kA~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l~~~ 279 (433)
T KOG4165|consen 232 DLDKAKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINMLKEE 279 (433)
T ss_pred CHHHHHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHHHhc
Confidence 999999999999999976 8999999999997 346666666554
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.1e-14 Score=140.64 Aligned_cols=244 Identities=18% Similarity=0.174 Sum_probs=175.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHh--HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHH--HHhhhhcCc--eee-ccCCc
Q 015020 79 RFSGAERRGIMLKFADLIEEH--AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA--GAADKIHGE--VLK-MSRAL 151 (414)
Q Consensus 79 ~~~~~~R~~~L~~~a~~l~~~--~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~--~~~~~~~~~--~~~-~~~~~ 151 (414)
.+|.++-.++|.++++.+... .....+.+..-+|.+....+. +.....+++.-. ...+.-.+. .+. ..+..
T Consensus 2 ~~~~~~Ii~~l~~~~~~~~~~~~~~r~~~~l~~~~g~~~~~~~~--l~~~~~~~~r~~L~~~l~~el~~~~~Ld~~~~~~ 79 (399)
T PF05893_consen 2 DLPVEEIIDFLDRVGKRWLDPDYPRRAIELLPKITGYSPEMVEY--LEALMRWFRRENLERKLERELGNPESLDGWVPRG 79 (399)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCchHHHHHhhhhhcCCCHHHHHH--HHHHHHhcCHHHHHHHHHHhcCCHhHhhcccccc
Confidence 467777777777777777642 223666667777776655431 333333222110 011110111 010 01223
Q ss_pred cceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCC----CcEEEE--eCC
Q 015020 152 QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD----GVLNVV--PGF 225 (414)
Q Consensus 152 ~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~----g~~~~v--~g~ 225 (414)
..+.++.|.|++++|.|.|.|+..+. .++.+|++||..|+|+|...+.++..|.+.|.+. .|. ..+.++ ++.
T Consensus 80 ~~~~~~~p~g~v~Hi~agNvp~~~~~-S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~ 157 (399)
T PF05893_consen 80 DGYVRAFPRGLVFHIAAGNVPLVGFY-SLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGG 157 (399)
T ss_pred cchhhccCCceEEEEcCCCccchHHH-HHHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCC
Confidence 36788999999999999999996554 5677888999999999999999999999999886 553 456666 454
Q ss_pred chhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCcccc
Q 015020 226 GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA 305 (414)
Q Consensus 226 ~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a 305 (414)
+.++.+.+. ...|.++.+||.++.+.|.+.+. ..++.+....-.+.+++..+++++.+++.++.-.+...+|.|.|
T Consensus 158 d~~~~~~~~--~~~D~vv~wGgd~ti~~ir~~~~--~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsS 233 (399)
T PF05893_consen 158 DEELEEALS--QQADAVVAWGGDETIRAIRQPLP--PGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSS 233 (399)
T ss_pred chHHHHHHH--HHCCEEEEeCCHHHHHHHHHHcC--CCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCC
Confidence 556777776 45799999999999999998443 44666666667777888888899999999999999999999999
Q ss_pred CCceEee---cchHHHHHHHHHHHHhcc
Q 015020 306 SSRVYVQ---EGIYDEFEKKLVEKAKAW 330 (414)
Q Consensus 306 ~~~v~V~---~~i~~~f~~~l~~~~~~~ 330 (414)
++.|||. +.-.++|.++|.+++.+.
T Consensus 234 p~~ifv~~g~~~~~~~f~~~L~~~L~~~ 261 (399)
T PF05893_consen 234 PQVIFVETGDGDSVEEFAERLAEALERA 261 (399)
T ss_pred CeEEEEECCCcccHHHHHHHHHHHHHHH
Confidence 9999999 344678888888887764
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.4e-07 Score=103.06 Aligned_cols=111 Identities=18% Similarity=0.145 Sum_probs=86.8
Q ss_pred eeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 015020 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP 223 (414)
Q Consensus 144 ~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~ 223 (414)
.+|+.+|..+..+..|.|++++++||| ..++.++..||++||+|++||++.++. . .+.+|..+.+.+.
T Consensus 1063 ~LPGPTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~--~~~Lp~~~~~~~~ 1130 (1208)
T PRK11905 1063 ELPGPTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------A--LADLPGLVAARID 1130 (1208)
T ss_pred cCCCCCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------H--HHhCccccccccc
Confidence 467788999999999999999999999 557889999999999999999998652 1 1225665555542
Q ss_pred CCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCC--CcceeeecC
Q 015020 224 GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN--LKPVSLELG 271 (414)
Q Consensus 224 g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~--~~~~~~elg 271 (414)
++..+..+++++.|.|+|++++.+.|.+..+.+. +.|++.|..
T Consensus 1131 -----~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905 1131 -----WTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred -----cccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCC
Confidence 3346777889999999999999999999888443 244555443
|
|
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.36 E-value=9.8e-07 Score=71.59 Aligned_cols=87 Identities=30% Similarity=0.423 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHH-HcCCEEEeCCcccCCCCCeEeeEEEeeCCCCC
Q 015020 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGK-REGATLLTGGKPIGKKGYYIEPTIFTNVTEDM 394 (414)
Q Consensus 316 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~-~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~ 394 (414)
...+.+.|++..+.+++-+...+++|. .+...|+.++|+.-. ..|..+..-|. ..|+|..||+|. |+|+|
T Consensus 8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~y---a~~~f~~~tiLs-vtP~m 78 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGY---AEGNFVGPTILS-VTPNM 78 (157)
T ss_pred hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeecc---ccCCcccceEEE-ecCCc
Confidence 467788889999999988877788887 667788888888621 12333333333 368999999998 99999
Q ss_pred cccccccccceeeEEEE
Q 015020 395 LIAKNEIFGPVMALMKF 411 (414)
Q Consensus 395 ~i~~~E~fgPv~~v~~~ 411 (414)
.++.||+||||+..+.-
T Consensus 79 s~ykeeI~gpVlv~l~~ 95 (157)
T KOG2449|consen 79 SCYKEEIFGPVLVRLET 95 (157)
T ss_pred ceeHhhhhcceEEEEee
Confidence 99999999999988754
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00051 Score=61.22 Aligned_cols=119 Identities=22% Similarity=0.243 Sum_probs=83.2
Q ss_pred CceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHH
Q 015020 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR 353 (414)
Q Consensus 274 ~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 353 (414)
.-+||++|.|++.|+..++.+.-.--| ..+.-.|+|||++.|+|+++++.+++.+ ++... +...+.|
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl------~~~va-----~Hpny~r 72 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPL------SPQVA-----NHPNYLR 72 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccC------Chhhc-----cCcHHHH
Confidence 458999999999999999999876544 3466679999999999999999999765 23222 2224555
Q ss_pred HHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 354 ILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 354 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
-.+.++ .-+++.+.++... .-..-.|.|+.|.+.+- +-. -..+|+++..|++
T Consensus 73 sl~~i~---~l~~~~I~~~~~~--~~~~aSPilV~d~~h~~--fg~-~PTgViTlhtFRt 124 (215)
T PF07368_consen 73 SLKKIK---CLNAKTIVADFEN--VPPPASPILVCDFTHSY--FGD-GPTGVITLHTFRT 124 (215)
T ss_pred HHHHHH---hcCCeEEEecccC--CCCCCCCEEEcCCCHHH--cCC-CCCeEEEEEccCC
Confidence 555544 5788999885432 12234689998877642 222 4456888877765
|
The function of this family is unknown. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0084 Score=67.65 Aligned_cols=103 Identities=16% Similarity=0.095 Sum_probs=77.1
Q ss_pred eeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 015020 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP 223 (414)
Q Consensus 144 ~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~ 223 (414)
.+|+++|..+.....|.|+|+++++-. ...+.+++.+|++||.+|+..++. ...++ +++|+.+.+.+.
T Consensus 1172 ~LPGPTGE~N~l~l~pRg~vLcl~~~~---~~~~~Ql~Aala~Gn~~v~~~~~~---~~~~~------~~Lp~~v~~~v~ 1239 (1318)
T PRK11809 1172 LLPGPTGERNTYTLLPRERVLCLADTE---QDALTQLAAVLAVGSQALWPDDAL---HRALV------AALPAAVQARIQ 1239 (1318)
T ss_pred cCCCCCCCcceeeccCCCcEEEeCCCH---HHHHHHHHHHHHhCCEEEEeCCch---hHHHH------HhccHHHHhHhh
Confidence 467788999999999999999998844 357889999999999988865442 12222 458988877663
Q ss_pred CCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCC
Q 015020 224 GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262 (414)
Q Consensus 224 g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~ 262 (414)
-. .........++.|.|.|.....+.+.++.+.+.
T Consensus 1240 ~~----~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~ 1274 (1318)
T PRK11809 1240 LA----KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRD 1274 (1318)
T ss_pred hc----cccccccCCccEEEEeCCHHHHHHHHHHHhcCC
Confidence 31 112223467999999999999999998888433
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=92.75 E-value=11 Score=37.41 Aligned_cols=170 Identities=22% Similarity=0.195 Sum_probs=81.7
Q ss_pred cCCccceeeecCCceEEEEcC-CchhHHhh-HHhHhhHhhcCCEEEE--ecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 015020 148 SRALQGYTLREPIGVVGHIIP-WNFPTTMF-FMKVSPALAAGCTMIV--KPAEQTPLIALYFAHLAKLAGVPDGVLNVVP 223 (414)
Q Consensus 148 ~~~~~~~~~~~P~Gvv~~i~p-~n~P~~~~-~~~l~~ALaaGN~vvl--kps~~~~~~~~~l~~~l~~aglP~g~~~~v~ 223 (414)
.+|.....++.|+--|++..| ..+|+.+. +...+||-.+|..=|+ -|+...-.....+.-+...+|+.. +..
T Consensus 95 ~~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e----vy~ 170 (412)
T PF00815_consen 95 EPGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE----VYK 170 (412)
T ss_dssp ETTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE----EEE
T ss_pred cCCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE----EEe
Confidence 356677789999999999999 44454443 5567899999976544 454443233334444556677532 222
Q ss_pred CCchhHHHHhhh----CCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCC--ceEEcCCCCHHHHHHHHHHHHhc
Q 015020 224 GFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS--PLLIFDDVDVNTAADMALLGILF 297 (414)
Q Consensus 224 g~~~~~~~~l~~----~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~--~~iV~~dadl~~a~~~i~~~~~~ 297 (414)
-.|.+.-.+|.- -|+||.|+=.|..-+...=..... . .-+=+ +-|.+ .+|.+++||.+..+..++.-+=+
T Consensus 171 vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g-~--V~ID~-~AGPSEv~ViAD~~A~p~~vAaDLLaQAEH 246 (412)
T PF00815_consen 171 VGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFG-D--VGIDM-IAGPSEVLVIADETANPEFVAADLLAQAEH 246 (412)
T ss_dssp --HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHH-S---EES-------EEEEEE-TTS-HHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcC-C--cccCC-CCCCCceEEEECCCCCHHHHHHHHHHHhcc
Confidence 224444444432 489999999998776433111111 1 11111 12222 24456789999999988887766
Q ss_pred cCCCccccCCceEee--cchHHHHHHHHHHHHhcc
Q 015020 298 NKGEICVASSRVYVQ--EGIYDEFEKKLVEKAKAW 330 (414)
Q Consensus 298 ~~GQ~C~a~~~v~V~--~~i~~~f~~~l~~~~~~~ 330 (414)
...-. .++|. +...++..+.+.+.+..+
T Consensus 247 d~~a~-----~vLvt~s~~la~~V~~~v~~~l~~l 276 (412)
T PF00815_consen 247 DPDAQ-----AVLVTTSEELAEAVEAEVERQLEEL 276 (412)
T ss_dssp -TT-E-----EEEEES-HHHHHHHHHHHHHHHTT-
T ss_pred CCCCc-----eEEEECCHHHHHHHHHHHHHHHHhC
Confidence 65423 34553 345566666666666554
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.57 E-value=8.6 Score=38.10 Aligned_cols=170 Identities=22% Similarity=0.251 Sum_probs=96.3
Q ss_pred ccCCccceeeecCCceEEEEcC---CchhHHhhHHhHhhHhhcCCEEE--EecCCCChHHHHHHHHHHHHcCCCCCcEEE
Q 015020 147 MSRALQGYTLREPIGVVGHIIP---WNFPTTMFFMKVSPALAAGCTMI--VKPAEQTPLIALYFAHLAKLAGVPDGVLNV 221 (414)
Q Consensus 147 ~~~~~~~~~~~~P~Gvv~~i~p---~n~P~~~~~~~l~~ALaaGN~vv--lkps~~~~~~~~~l~~~l~~aglP~g~~~~ 221 (414)
..+|.....++.|+--|++..| .-||-..+ ...+||-.+|+.=| .-|++..- .+..+.-+...+|+.. +
T Consensus 104 ~~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvL-M~avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e----I 177 (425)
T COG0141 104 TEPGVVLGQRWRPIERVGLYVPGGKAAYPSTVL-MNAVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE----V 177 (425)
T ss_pred ccCCcEEEEEEEEhhheEEEccCCCcCChHHHH-HhhccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH----H
Confidence 3466777889999999999999 55555444 44679999998644 44555422 2222222334455421 1
Q ss_pred EeCCchhHHHHhhhC----CCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCce-EEcCCCCHHHHHHHHHHHHh
Q 015020 222 VPGFGPTAGAAIASH----MDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL-LIFDDVDVNTAADMALLGIL 296 (414)
Q Consensus 222 v~g~~~~~~~~l~~~----~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~-iV~~dadl~~a~~~i~~~~~ 296 (414)
..-.|.+.-.+|.-. +.||.|+=.|..-+... +..- .+..-+=+..|-..-+ |-++++|.+..+..++.-+=
T Consensus 178 y~vGGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaA--Kr~v-~g~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQAE 254 (425)
T COG0141 178 YKVGGAQAIAALAYGTETVPKVDKIVGPGNAYVTAA--KRLV-SGVVGIDMIAGPSEVLVIADETANPDFVAADLLSQAE 254 (425)
T ss_pred HHccCHHHHHHHHccCCcCCccCeeeCCCcHHHHHH--HHHh-hCCcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhh
Confidence 111144444555544 88999998888765332 1111 1111122222333333 44456999999988887776
Q ss_pred ccCCCccccCCceEeec--chHHHHHHHHHHHHhcc
Q 015020 297 FNKGEICVASSRVYVQE--GIYDEFEKKLVEKAKAW 330 (414)
Q Consensus 297 ~~~GQ~C~a~~~v~V~~--~i~~~f~~~l~~~~~~~ 330 (414)
+... .+.|+|.. .+.++..+.+.+.+..+
T Consensus 255 Hd~~-----a~aiLvT~s~~la~~v~~~v~~~l~~l 285 (425)
T COG0141 255 HDPD-----AQAILVTDSEELAEAVEAAVERQLETL 285 (425)
T ss_pred cCCC-----ceEEEEeCcHHHHHHHHHHHHHHHHhc
Confidence 6533 33456644 44566666665555543
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=85.92 E-value=7.6 Score=39.76 Aligned_cols=109 Identities=20% Similarity=0.229 Sum_probs=73.9
Q ss_pred eeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeC
Q 015020 145 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPG 224 (414)
Q Consensus 145 ~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g 224 (414)
++...+..+.....|.|-|+++.+ +....+.+++.+|+.||.+++-+.... +.++. .+|.++-..+.-
T Consensus 629 LpGptGErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~~-------aa~~~--~l~~~v~~~~~~ 696 (769)
T COG4230 629 LPGPTGERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSGL-------AALLK--DLPSAVASRIQV 696 (769)
T ss_pred cCCCcccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcchH-------HHHHH--hchhhhhhheee
Confidence 456678899999999999999965 557788899999999999998665422 12111 255544222221
Q ss_pred CchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecC
Q 015020 225 FGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 271 (414)
Q Consensus 225 ~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elg 271 (414)
.++ . ...-.++.+.|.|...-.+.+.+..+ .+..|++.-.+
T Consensus 697 ~~~----~-~~~~~~~~vl~~gd~~~~r~~~~~iA-~~~Gpiv~~~~ 737 (769)
T COG4230 697 AKD----W-TADIPFDAVLFHGDSDRLRALCEAIA-ARDGPIVSVQG 737 (769)
T ss_pred ccc----h-hhccceeeEEecCCHHHHHHHHHHHh-cCCCCeEEeec
Confidence 111 1 23446789999999999899888776 44455554444
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 414 | ||||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 1e-117 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 1e-112 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 1e-111 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 1e-111 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 1e-111 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-111 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 1e-111 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 1e-111 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 1e-110 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-110 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 1e-110 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 1e-110 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 1e-108 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 2e-88 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 5e-88 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 1e-87 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 4e-87 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 5e-87 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 2e-86 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 5e-77 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 1e-76 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 3e-76 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-75 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-75 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 4e-75 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 4e-70 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 4e-69 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 6e-69 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 2e-68 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 2e-67 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 2e-67 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 9e-67 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 3e-66 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 9e-66 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-65 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-65 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 3e-63 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 1e-62 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 2e-61 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 1e-59 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 5e-59 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 2e-57 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 4e-56 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 3e-55 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 8e-55 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 6e-52 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 1e-51 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 2e-51 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 2e-51 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 4e-51 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 4e-49 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 1e-47 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 3e-46 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 2e-43 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 2e-41 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 4e-41 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 9e-41 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 3e-40 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 3e-40 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 1e-39 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 3e-38 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 5e-37 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 6e-37 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 5e-35 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 7e-35 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 1e-33 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 1e-33 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 4e-32 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 2e-29 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 2e-29 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 4e-29 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 6e-29 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 9e-29 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 1e-28 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 2e-28 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 6e-26 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 1e-25 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 9e-25 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 2e-24 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 2e-22 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 9e-22 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 6e-20 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 1e-19 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 3e-19 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 8e-19 | ||
| 2y51_A | 534 | Crystal Structure Of E167a Mutant Of The Box Pathwa | 3e-15 | ||
| 2y53_A | 534 | Crystal Structure Of E257q Mutant Of The Box Pathwa | 3e-15 | ||
| 2y52_A | 534 | Crystal Structure Of E496a Mutant Of The Box Pathwa | 3e-15 | ||
| 2vro_A | 532 | Crystal Structure Of Aldehyde Dehydrogenase From Bu | 3e-15 | ||
| 2y5d_A | 534 | Crystal Structure Of C296a Mutant Of The Box Pathwa | 7e-14 | ||
| 3my7_A | 452 | The Crystal Structure Of The Acdh Domain Of An Alco | 3e-06 | ||
| 1eyy_A | 510 | Crystal Structure Of The Nadp+ Dependent Aldehyde D | 2e-05 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 1e-04 |
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532 | Back alignment and structure |
|
| >pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol Dehyd From Vibrio Parahaemolyticus To 2.25a Length = 452 | Back alignment and structure |
|
| >pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde Dehydrogenase From Vibrio Harveyi. Length = 510 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 719 bits (1858), Expect = 0.0
Identities = 221/397 (55%), Positives = 288/397 (72%), Gaps = 1/397 (0%)
Query: 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG- 75
+ K+TK+FIN E+ SVSGK F +P T E + + EGDKEDVD AVKAARQAF G
Sbjct: 16 LQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGS 75
Query: 76 PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
PW +ER ++ K ADLIE +LA +EA++ GKL S A + D+ G TLRY AG
Sbjct: 76 PWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAG 135
Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
ADKI G + M YT EP+GV G IIPWNFP MF K+ PAL+ G T++VKPA
Sbjct: 136 WADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPA 195
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
EQTPL AL+ L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ +
Sbjct: 196 EQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK 255
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
+AA SNLK VSLELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E I
Sbjct: 256 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESI 315
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375
YDEF ++ VE+AK +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L GG P
Sbjct: 316 YDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPW 375
Query: 376 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
G KGY+I+PT+F++VT+DM IAK EIFGPV +MKFK
Sbjct: 376 GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFK 412
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 718 bits (1857), Expect = 0.0
Identities = 216/399 (54%), Positives = 276/399 (69%), Gaps = 1/399 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF
Sbjct: 13 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75 G-PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYY 133
G PW R + R ++ + ADLIE LA LE LD GK + + + D+ LRYY
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 373
IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL GG
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 374 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+GY+I+PT+F +V + M IAK EIFGPVM ++KFK
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 411
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 717 bits (1854), Expect = 0.0
Identities = 168/395 (42%), Positives = 259/395 (65%), Gaps = 4/395 (1%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
+LFI GEFVD+ KT+ TI+P G I +++ DVD AV AA++AF++G W + +
Sbjct: 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKIN 96
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
+R ++ + AD++E+H E LA +EALDAG +++ A + + T RY+AG DKI
Sbjct: 97 ARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQ 156
Query: 142 GEVLKMSRALQG----YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
G + +++A T +EP+GV G +IPWN+P M K + LAAG T+++KPA+
Sbjct: 157 GATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
TPL AL FA L AG+P GV+N++PG G G ++ H D+ K+ FTGST+VG+ +M++
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
A SN+K VSLELGGKSPL+IF D D+N A M + + FNKGE C+A+ R++V+E I++
Sbjct: 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHN 336
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 377
+F +K+VE+ + +G+P + GPQ + +++ Y + G +EGATL+ GG + +
Sbjct: 337 QFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPR 396
Query: 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
G++ +PT+FT+V + M IAK E FGP+M + +F
Sbjct: 397 PGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFA 431
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 691 bits (1785), Expect = 0.0
Identities = 165/394 (41%), Positives = 239/394 (60%), Gaps = 5/394 (1%)
Query: 22 TKLFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRF 80
++ ++G+ VD+ SG T + + P GE + E +DV AV AAR+AFD GPWPR
Sbjct: 23 YQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRM 82
Query: 81 SGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
SGAER +M K ADLI E LA++E+L+ GK + A+ G+I A+ Y AG A +
Sbjct: 83 SGAERSRLMFKVADLILARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARAL 141
Query: 141 HGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
G+ G LREP+GVVG I PWNFP + +V A+ +GCT+++KP+E T
Sbjct: 142 EGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTS 201
Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
++ A LA+ AG+PDGV NVV G+G AG +A ++D V+FTGS VG ++ + AA
Sbjct: 202 GTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAA 261
Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
+K V LELGGK P ++F D D++ AAD G+ N G+ C++ SR+ VQEGI D
Sbjct: 262 -RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDAL 320
Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KK 378
++L++ ++ GDP + + G + + +++ SY+ G GA LL GG+ IG +
Sbjct: 321 MERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREA 380
Query: 379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
G Y PT+F VT DM IA+ EIFGPV++ + FK
Sbjct: 381 GLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFK 414
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 688 bits (1778), Expect = 0.0
Identities = 153/404 (37%), Positives = 235/404 (58%), Gaps = 7/404 (1%)
Query: 14 FKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFD 73
++ + + +I+GE+V+S + T + I+P E I ++EG KED + A+ AAR+AF+
Sbjct: 25 MELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFE 84
Query: 74 HGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYY 133
G W + + R + AD I+EH E LA LE LD GK + D+ N Y+
Sbjct: 85 SGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESY-ADMDDIHNVFMYF 143
Query: 134 AGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV 192
AG ADK GE++ + ++EP+GVV I PWN+P K++PALA GC++++
Sbjct: 144 AGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVM 203
Query: 193 KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252
KP+E TPL + L + G P G +N++ G G G ++ H ++D VSFTG + G+
Sbjct: 204 KPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGK 263
Query: 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 312
+M+ AA +N+ ++LELGGK+P +IFDD D A D AL G F+ G++C A SR+ VQ
Sbjct: 264 HIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQ 322
Query: 313 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 372
I D+FE+ L+++ K +G+ FD GP + + ++I SY++ K EGAT+ GG
Sbjct: 323 NSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGG 382
Query: 373 KPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
K K G + EPT+ TN M I + E+FGPV+ + F+
Sbjct: 383 KRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFE 426
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 686 bits (1773), Expect = 0.0
Identities = 174/405 (42%), Positives = 236/405 (58%), Gaps = 11/405 (2%)
Query: 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH-- 74
I +LFING++ V K I+P T I I KEDVD+AV AA+ A
Sbjct: 3 IPIPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNK 62
Query: 75 -GPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYY 133
W SGA R + A + E LA LE++D GK A DI A YY
Sbjct: 63 GADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAA-WDIDDVAGCFEYY 121
Query: 134 AGAADKIHGEVLKMSRALQG----YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT 189
A A+K+ + LREPIGVVG I PWN+P M KV+PALAAGC
Sbjct: 122 ADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCA 181
Query: 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD 249
I+KP+E L L + K G+P GVLN++ G GP AGA +A+H D+DKV+FTGS+
Sbjct: 182 AILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSA 241
Query: 250 VGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 309
G ++M AAA +KPVSLELGGKSPL++F+DVD++ AA+ A+ G + G+IC A+SR+
Sbjct: 242 TGSKIMTAAA-QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRL 300
Query: 310 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 369
+ E I EF ++V+ K + DP + R GP V + Q+++IL ++ + K EGAT+L
Sbjct: 301 ILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATIL 360
Query: 370 TGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
TGG KKG++IEPTI T+VT +M I + E+FGPV+ + F
Sbjct: 361 TGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFS 405
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 676 bits (1748), Expect = 0.0
Identities = 157/395 (39%), Positives = 234/395 (59%), Gaps = 9/395 (2%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
FI+G++V+ +G FE+I P TGE IA++ V+ A+ +A++A W S
Sbjct: 15 ASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQ--KEWAAMS 72
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG-AADKI 140
R I+ + AD++ E + L+ LE LD GK + D A+ ++ G A +
Sbjct: 73 PMARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSAL 132
Query: 141 HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
+G+ + + YT R P+GV I WN+P + K +PAL AG M+ KP+E TPL
Sbjct: 133 NGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPL 191
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
AL A + AG+P G+ NV+ G T G + +H D+ KVS TGS GR+V AAA
Sbjct: 192 GALKIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRKVAAAAA- 249
Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
+LK V++ELGGKSP+++FDD D+ +A A+LG ++ G++C +RV+VQ+ F
Sbjct: 250 GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFL 309
Query: 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK---PIGK 377
+ L + +A ++GDP D A GP V K Q +++LSYIE GK EGATL+TGG +
Sbjct: 310 ENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAG 369
Query: 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+G Y++PT+F +VT+DM IA+ EIFGPVM ++ F
Sbjct: 370 EGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFD 404
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 671 bits (1734), Expect = 0.0
Identities = 148/403 (36%), Positives = 230/403 (57%), Gaps = 12/403 (2%)
Query: 17 PEIKFTKLFINGEFVDSVSGKTFE-TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
+ + G + S G T E +P TG + ++ E+VD AV++A+ A+
Sbjct: 15 VVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL-- 72
Query: 76 PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
W + +G ER +ML+ A +I E + +A LE ++ GK + A+ DI A + YYAG
Sbjct: 73 KWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAG 131
Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
A + G+ +++ YT REP+GV I+ WN+P + K +PALA G ++ KP+
Sbjct: 132 LAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPS 191
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
TP+ + A + AGVP G++NVV G G G+ + H ++ KVSFTGS G++VM
Sbjct: 192 PMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVM 250
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
+ +A +K V+LELGGKSPLLIF D ++ A AL+ +G++C +RV+VQ I
Sbjct: 251 EMSA-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREI 309
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375
+F +++V++ KA VVGDP R G + K Q D++L ++ K+EGA +L GG+P+
Sbjct: 310 MPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPL 369
Query: 376 G------KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
K GY++ P + N +DM K EIFGPVM+++ F
Sbjct: 370 TPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFD 412
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 667 bits (1724), Expect = 0.0
Identities = 168/404 (41%), Positives = 236/404 (58%), Gaps = 14/404 (3%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW 77
+ + FI GEFV S SG+TF ++DP T E + A G + +VD A KAA +AF W
Sbjct: 23 KERPALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RW 80
Query: 78 PRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 137
R ER+ +L+ A+LIE+HA+ LAV+E LDAG++ + + AA +YA A
Sbjct: 81 SRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYA 139
Query: 138 DK-IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
+ + + R YT+R P G VG I PWN P + +++PALA G T+++KPAE
Sbjct: 140 EHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAE 199
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
+P A A + K A +P GV N+V GFG AGAA+ +H + ++ TG T+ G+ VM+
Sbjct: 200 WSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMR 259
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA +LK +S ELGGKSP L+F D D+ A D + I GE C ASSR+ V+E I+
Sbjct: 260 NAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIF 318
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376
++F K+VE+A+A VG P DP GP + + R+L Y+E GKREGA LL GG+
Sbjct: 319 EDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAK 378
Query: 377 --------KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+G Y+ PT+F M IA+ EIFGPV+ + FK
Sbjct: 379 TSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFK 421
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 657 bits (1698), Expect = 0.0
Identities = 146/403 (36%), Positives = 212/403 (52%), Gaps = 7/403 (1%)
Query: 12 SLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA 71
SL+K + KL INGE V G+ +P TG+ + IAE E VD AV+AA A
Sbjct: 14 SLYKKAGLMQHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAA 72
Query: 72 FDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLR 131
F W + + R +LK AD+IEE+ +V A LE+ + GK A +IP + R
Sbjct: 73 F--AEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFR 130
Query: 132 YYAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTM 190
++AGAA ++G R+P+GVV I PWN+P M K++PALAAG +
Sbjct: 131 FFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCV 190
Query: 191 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 250
++KP+E TPL AL A LAK P GV+N++ G G T G + H + VS TGS
Sbjct: 191 VLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIAT 249
Query: 251 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 310
G ++ A S++K +ELGGK+P+++FDD D+ + +N G+ C A+ R+Y
Sbjct: 250 GEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIY 308
Query: 311 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLL 369
Q+GIYD +KL G P D + GP +R+ +E K G ++
Sbjct: 309 AQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVI 368
Query: 370 TGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
TGG+ GYY PT+ +D I + E+FGPV+++ F
Sbjct: 369 TGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFD 411
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 644 bits (1664), Expect = 0.0
Identities = 133/400 (33%), Positives = 210/400 (52%), Gaps = 7/400 (1%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ T+L I F + ++PRTG I +AE +D AV AA +AF
Sbjct: 19 YFQSMMDTQLLIGSRFEAG-TEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV- 76
Query: 75 GPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 134
W + + AER +LK AD IE+ A+ A LEAL+ GK + K ++P + R++A
Sbjct: 77 -GWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFA 135
Query: 135 GAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
GA +H R+PIG+VG I PWN+P M K++PA+ G T++ K
Sbjct: 136 GAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFK 195
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
P+EQTPL AL A L +P+GV+NV+ G G T G A+ +H + VS TG G++
Sbjct: 196 PSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKK 254
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
V+ AAA +K LELGGK+P++++ D D+ + +N G+ C A+ R+Y +
Sbjct: 255 VLAAAA-KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEA 313
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGG 372
GIY++ L D GP + ++Q DR+ S++E + + TGG
Sbjct: 314 GIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGG 373
Query: 373 KPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+ +G++ +PT+ T++ I + E+FGPV+++ +F
Sbjct: 374 RTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFT 413
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 619 bits (1599), Expect = 0.0
Identities = 154/398 (38%), Positives = 222/398 (55%), Gaps = 4/398 (1%)
Query: 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP 76
++ KLFI G++ + E P TGE + ++ DVD AV AAR AFD+GP
Sbjct: 4 SATEYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGP 63
Query: 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
WP ER ++ ++ E ++ L A + G+ + + G+ + Y+AGA
Sbjct: 64 WPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGA 123
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADK+ + Q REP+GVVG I+ WN P + K++PAL AGCT+++KPA
Sbjct: 124 ADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAA 183
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
+TPL A A + G+P+GVL+VVPG G G A+ S+ DID +FTGS+ VGR+V +
Sbjct: 184 ETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGR 242
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA LKP +LELGGKS +I +DVD+ A M + + N G+ CV +R+ Y
Sbjct: 243 RAA-EMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRY 301
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376
DE + A VG P DPA + GP + +KQ R+ YI G EGA L+ GG
Sbjct: 302 DEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPE 361
Query: 377 --KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
G++I+PT+F +V M IA+ EIFGPV+A++ +
Sbjct: 362 GLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYD 399
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 596 bits (1538), Expect = 0.0
Identities = 152/399 (38%), Positives = 218/399 (54%), Gaps = 10/399 (2%)
Query: 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP 76
+TK +INGE+V+S S +T E I+P T E I ++A+G+K DVD AV+AA +
Sbjct: 3 AMRDYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLE-- 60
Query: 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
+ S ER+ ++ K E + + + G S ++ N A
Sbjct: 61 FRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDA 120
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
D E R ++E IGV G I PWNFPT +K++ A AAG +++KP+E
Sbjct: 121 LDNYEFE----ERRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSE 176
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
+TP A+ A + GVP GV N+V G G G ++ H + +SFTGS G ++M+
Sbjct: 177 ETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIME 236
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA + K VSLELGGKSP ++ DDVD+ AA ++ N G++C A +RV V I
Sbjct: 237 KAA-KDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIK 295
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG--KP 374
D F +L E+ VG+P + + GP + KKQFD++ +YI G EGA L GG KP
Sbjct: 296 DAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKP 355
Query: 375 IG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
G +KGY+ PTIF NV M IA+ EIFGPVM+++ +
Sbjct: 356 EGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYN 394
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 594 bits (1534), Expect = 0.0
Identities = 143/397 (36%), Positives = 218/397 (54%), Gaps = 7/397 (1%)
Query: 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP 78
+ K +ING + D + IDP T EA A I+ G D D A+ AA++AF W
Sbjct: 23 LNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWK 80
Query: 79 RFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD 138
S ER G + K ++ E+ + +A +++ G A ++ +R + A
Sbjct: 81 TTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYK 140
Query: 139 KIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 198
+ + + Q + IGVVG I PWN+P +KV PAL AGCTM++KP+E
Sbjct: 141 EFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIA 200
Query: 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
PL A+ FA + A +P GV N++ G G G+ +++H D++ +SFTGST G+ + + A
Sbjct: 201 PLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNA 260
Query: 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318
+ + LK V LELGGK +IF D D++ A + +N G+ C A +R+ V++ IYD+
Sbjct: 261 S-NTLKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDK 318
Query: 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG--KPIG 376
K + A+ VG GP V K+Q+D+I I+ G EGATL+TGG P+G
Sbjct: 319 AIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMG 378
Query: 377 -KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
++GYY+ PT+F +V M I + EIFGPV++L+ F
Sbjct: 379 MERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFN 415
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 588 bits (1518), Expect = 0.0
Identities = 131/406 (32%), Positives = 212/406 (52%), Gaps = 13/406 (3%)
Query: 14 FKMPEIKFTKLFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAF 72
+ K L INGE V + ++ +P R + + +++ +++ + A+++A +AF
Sbjct: 30 VEKELGKEYPLIINGERVTT--EDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAF 87
Query: 73 DHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRY 132
W + ER I++K A +I + +AGK A D A + L Y
Sbjct: 88 Q--TWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEAD-ADTAEAIDFLEY 144
Query: 133 YAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191
YA +++ +SR Q P+GV I PWNF + + G T++
Sbjct: 145 YARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVV 204
Query: 192 VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG 251
+KPA TP++A F + + AG+P GV+N VPG G G + H ++FTGS DVG
Sbjct: 205 LKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVG 264
Query: 252 RQVMQAAAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
++ + AA ++LK V +E+GGK +++ D D++ AA+ L+ G+ C A
Sbjct: 265 VRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAG 324
Query: 307 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGA 366
SR + + +YDE +K V AK VGDP + GP +D+K F++I+SYIE GK+EG
Sbjct: 325 SRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG- 383
Query: 367 TLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
L+TGG+ G++I+PTI ++ + +I + EIFGPV+A K
Sbjct: 384 RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKAN 429
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 546 bits (1410), Expect = 0.0
Identities = 123/401 (30%), Positives = 209/401 (52%), Gaps = 15/401 (3%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP 78
+ L+I GE+VD+ + +++P E + A+ K + + A++AA +AF W
Sbjct: 36 RHYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWK 91
Query: 79 RFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD 138
+ +R ++LK A L+ L + GK A D+ A + + YYA AA
Sbjct: 92 DWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAAL 150
Query: 139 KIHGEVLKMSRA--LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
+ +++ + P+G I PWNFP +F + +A G T+I KPAE
Sbjct: 151 RYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAE 210
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
++ + AG P GV+N +PG G GA + H I ++FTGS +VG ++ +
Sbjct: 211 DAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYE 270
Query: 257 AAA-----TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYV 311
AA + K +E GGK+ +++ + D + AA+ ++ +G+ C A+SR+ +
Sbjct: 271 AAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLIL 330
Query: 312 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 371
+G Y+ ++++++A+ VG P + GP V +Q ++LSYIE GK EG L+ G
Sbjct: 331 TQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQ-LVLG 388
Query: 372 GKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
GK + +GY+I PT+FT V IA+ EIFGPV+++++ K
Sbjct: 389 GKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 544 bits (1403), Expect = 0.0
Identities = 139/401 (34%), Positives = 209/401 (52%), Gaps = 9/401 (2%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
I TK I G++V+ S + I+P IA + DVD A +AA++A
Sbjct: 6 TFAGIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQ-- 63
Query: 75 GPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 134
W AER I+ + A+L+EEH E + ++G S A +I A N + A
Sbjct: 64 AEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKAN-LEITLAGNITKESA 122
Query: 135 GAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
++HG + + + R GVVG I PWNFP + V+PALA G +++K
Sbjct: 123 SFPGRVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIK 182
Query: 194 PAEQTPLIALY-FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252
PA TP+ A + + AGVP GV++ V G G G +H +SFTGST VGR
Sbjct: 183 PASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGR 242
Query: 253 QVMQAAATS-NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYV 311
+V + A +K V+LELGG +P ++ D D++ AA A +G ++G+IC++ +RV V
Sbjct: 243 RVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIV 302
Query: 312 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 371
++DEF +K VE K GDP GP ++ Q + IE K+EGAT+
Sbjct: 303 DAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVE 362
Query: 372 GKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
G +G + P +F++VT DM IA+ EIFGP+++++K
Sbjct: 363 GPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKAD 400
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 500 bits (1291), Expect = e-176
Identities = 105/393 (26%), Positives = 176/393 (44%), Gaps = 8/393 (2%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
+ +I G+++ G+T E++DP + D VD AV AAR+AF W R
Sbjct: 6 STHYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRP 62
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
+R ++ +FA ++ A+ LA + + GK + ++ N + A +
Sbjct: 63 LEQRIELLERFAATLKSRADELARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERT 121
Query: 142 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
GE +P GVV P+NFP + + PAL AG ++ KP+E TP +
Sbjct: 122 GEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKV 181
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
A AG+P GVLN+V G G G A+A+H +D + FTGS+ G +
Sbjct: 182 AELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQ 240
Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFE 320
K ++LE+GG +PL++ + D++ A + + G+ C + R+ V +G + D
Sbjct: 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALL 300
Query: 321 KKLVEKAKAWVVGDPF-DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG 379
+LV + VG PA G + + +L EH +GA L
Sbjct: 301 ARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGA 360
Query: 380 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+ P I +V+ E FGP++ ++++
Sbjct: 361 ALLTPGIL-DVSAVAERPDEEFFGPLLQVIRYS 392
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 495 bits (1277), Expect = e-174
Identities = 111/404 (27%), Positives = 188/404 (46%), Gaps = 18/404 (4%)
Query: 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP 76
+ ++ GE+ S G+ E P IA++ +E+V+ + +
Sbjct: 14 GGVPVYPSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-S 70
Query: 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
G ER ++ K AD+IE + +V A + ++AGK S A G++ A + LR
Sbjct: 71 ARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELD 129
Query: 137 ADKIHGEVLKMSRALQG-----YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191
KI G+ + REP+GVV I P+N+P K++ + G ++
Sbjct: 130 LKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVV 189
Query: 192 VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG 251
VKP+ PL A AG P + ++ G I + + VSFTGST+VG
Sbjct: 190 VKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKE-AEKIVADDRVAAVSFTGSTEVG 248
Query: 252 RQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYV 311
+V++ +K +ELGG P ++ +D D++ AAD GI G+ C A V
Sbjct: 249 ERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLA 305
Query: 312 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 371
+ +Y + +++ ++ + VGDP DP V GP + D +++ IE +G +L G
Sbjct: 306 ERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAG 365
Query: 372 GKPIGKKGYYIEPTIF---TNVTEDMLIAKNEIFGPVMALMKFK 412
G+ +G Y++PT + +DM++ K E+F PV ++ K
Sbjct: 366 GRRLG--PTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVK 407
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 495 bits (1277), Expect = e-174
Identities = 129/402 (32%), Positives = 201/402 (50%), Gaps = 16/402 (3%)
Query: 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP 76
E + NGE+V+S +G+ P +G A+ I +E+V+ A++ A+ A
Sbjct: 7 TEQFNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKI-- 64
Query: 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
W ER ++ +ADL+EE E++ L + K A G++ A+ +R+ A
Sbjct: 65 WKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAI-GEVSRTADIIRHTADE 123
Query: 137 ADKIHGEVLKMSRALQG------YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTM 190
A +++GE LK + G REP+GVV I P+N+P + K++PAL G T+
Sbjct: 124 ALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTV 183
Query: 191 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 250
+ KPA Q L + AG P+G++ VV G G G + H ID ++FTG T
Sbjct: 184 VFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTT 243
Query: 251 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 310
G ++ + A + PV LELGGK P ++ DD D+ A + G G+ C A RV+
Sbjct: 244 GERISEKA---KMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVF 300
Query: 311 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 370
VQ+ + D+ + E + VG P D P +D+K I I+ GATLL+
Sbjct: 301 VQDSVADQLVANIKELVEQLTVGSPEDD-ADITPVIDEKSAAFIQGLIDDALENGATLLS 359
Query: 371 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
G K +G + PT+ +VT M +A E FGPV+ +++ K
Sbjct: 360 GNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVK 398
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 495 bits (1277), Expect = e-174
Identities = 87/421 (20%), Positives = 158/421 (37%), Gaps = 33/421 (7%)
Query: 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
M E+ K + G+++ +G DP TG A+ R++ + A
Sbjct: 4 MTEL--LKNHVAGQWIAG-TGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGG--A 58
Query: 76 PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
+ A+R + L++ + ++G + + DI G TL YYA
Sbjct: 59 ALRALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAK 117
Query: 136 AADKIHGEVLKMSRALQG----------YTLREPIGVVGHIIPWNFPTTMFFMKVSPALA 185
+ + + + L GV I +NFP+ + K +PAL
Sbjct: 118 LGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALL 177
Query: 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGV-PDGVLNVVPGFGPTAGAAIASHMDIDKVSF 244
+G +IVKPA T + AG+ P G L+++ G ++ + D VSF
Sbjct: 178 SGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSF 234
Query: 245 TGSTDVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDVDVNT-----AADMALLGILFN 298
TGS D + A ++++ + ++ D +T + +
Sbjct: 235 TGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVK 294
Query: 299 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYI 358
G+ C A R +V E + + L K VG+P + AVR G V ++Q++ +L+ I
Sbjct: 295 SGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGI 354
Query: 359 EHGKREGATLLTGGK-----PIGKKGYYIEPTIF--TNVTEDMLIAKNEIFGPVMALMKF 411
+ E + P +F + L+ E+FGPV ++ +
Sbjct: 355 AALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPY 414
Query: 412 K 412
+
Sbjct: 415 R 415
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 488 bits (1260), Expect = e-172
Identities = 116/393 (29%), Positives = 197/393 (50%), Gaps = 18/393 (4%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
+FI+G++++ + + I+P + E I +I +E+ A+ A + +
Sbjct: 2 MFIDGKWIN---REDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPIT 56
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
+R I++ A I+E E LA + A+DAGK A+ ++ + T + A + E
Sbjct: 57 KRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDE 115
Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
V+ L +T REP+G+VG I P+NFP + K++PA+A G ++ P+ + PL+ +
Sbjct: 116 VIPSDDRL-IFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCI 174
Query: 204 YFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
A + + A VP GV N++ G G G I + ++ +SFTGS+ VG + + A
Sbjct: 175 ELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234
Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
K ++LELGG +P ++ D D+N A + + G G++C++ + V E I D+F
Sbjct: 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKF 291
Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG 379
+ V KAK VG+P D GP + + + + +E EG LL GGK
Sbjct: 292 IEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DK 348
Query: 380 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
PTI V D ++ K E F PV+ +++
Sbjct: 349 ALFYPTIL-EVDRDNILCKTETFAPVIPIIRTN 380
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 451 bits (1162), Expect = e-157
Identities = 132/399 (33%), Positives = 208/399 (52%), Gaps = 6/399 (1%)
Query: 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
M ++I+G+FV + ++P T I+RI +G ED A+ AA +A
Sbjct: 1 MSVPVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP-- 58
Query: 76 PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
W ER + K + I E A ++ L + GK+ A+ ++ A+ + Y A
Sbjct: 59 EWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAE 117
Query: 136 AADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194
A + GE+++ R + +GV I+PWNFP + K++PAL G T+++KP
Sbjct: 118 WARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKP 177
Query: 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254
+E TP A+ FA + G+P GV N+V G G T G +A + + VS TGS G ++
Sbjct: 178 SEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKI 237
Query: 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
M AA N+ V LELGGK+P ++ DD D+ A + + N G++C + RVYVQ+G
Sbjct: 238 MATAA-KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKG 296
Query: 315 IYDEFEKKLVEKAKAWVVGDPFD-PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 373
IYD+F +L E +A G+P + + GP ++ +R+ + EGA + GGK
Sbjct: 297 IYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGK 356
Query: 374 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+ KGYY PT+ +V ++M I E FGPV+ ++ F
Sbjct: 357 AVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFD 395
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 450 bits (1159), Expect = e-157
Identities = 120/399 (30%), Positives = 189/399 (47%), Gaps = 18/399 (4%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
K K ++NGE+ S + +P +G + + E+VD +A++A W
Sbjct: 3 KQYKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPA--WRA 58
Query: 80 FSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK 139
S ER + K AD++ E + + + + K + A ++ A + Y A +
Sbjct: 59 LSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLR 117
Query: 140 IHGEVLKMSRAL------QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
+ GEVL+ REP+G+V I P+N+P + K++PAL AG + K
Sbjct: 118 MEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFK 177
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
P Q + L A AG+P GV N + G G G I H ++ ++FTGST +G +
Sbjct: 178 PPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 237
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ + A ++P+ LELGGK ++ +D D+ A + G G+ C A RV V E
Sbjct: 238 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVME 294
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 373
+ DE +K+ EK A +G+P D P +D K D + I +GAT LT K
Sbjct: 295 SVADELVEKIREKVLALTIGNPEDD-ADITPLIDTKSADYVEGLINDANDKGATALTEIK 353
Query: 374 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+G I P +F VT DM +A E FGPV+ +++
Sbjct: 354 R---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVT 389
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 441 bits (1137), Expect = e-153
Identities = 108/400 (27%), Positives = 191/400 (47%), Gaps = 10/400 (2%)
Query: 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
M K FING++ SG+T + ++P I + + ++ A A++A
Sbjct: 1 MSFETLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK-- 58
Query: 76 PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
W + + +R+ ++ K + E+ + + ++ A + G + ++ L
Sbjct: 59 EWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKST-IELEQTIAILDEAMT 117
Query: 136 AADKIHG-EVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
++ G + + R P+GV+ I P+NFP + ++PA+A G +++ K
Sbjct: 118 YTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHK 177
Query: 194 PAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252
P QT + A + AG+P GVLNV+ G + ++ +SFTGST VGR
Sbjct: 178 PDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGR 237
Query: 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 312
+ + A K ++LELGG +P + D DV+ A D A+ G ++G+IC+ +R+ V
Sbjct: 238 HIGEIAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVH 296
Query: 313 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 372
+ +YDEF +K + K GD DP GP ++++Q ++ L IE K +G L G
Sbjct: 297 QDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEG 356
Query: 373 KPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
K G + P +F + IA+ E+F P+ ++K
Sbjct: 357 KR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAG 393
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 420 bits (1081), Expect = e-144
Identities = 136/417 (32%), Positives = 216/417 (51%), Gaps = 18/417 (4%)
Query: 1 MEGSLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKED 60
M ++ + FI G++V S T + + P TG+ I I G K D
Sbjct: 1 MSLTVQD---LHFKN------KVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKAD 51
Query: 61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120
+ A++ A+ A W + + R+ ++ FA+ I E+ +LA + + GKL S A+
Sbjct: 52 AENALEVAQAAQK--AWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAE- 108
Query: 121 GDIPGAANTLRYYAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMK 179
++ A + Y A I G++L + Y + P GVV I WNFP + K
Sbjct: 109 MEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRK 168
Query: 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDI 239
+ PAL G TM++KP ++TPL +AK AG+PDGVLNV+ G G G +
Sbjct: 169 IGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPIT 228
Query: 240 DKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK 299
++ TGST G+Q+ + +A + PV LELGGK+P+++ DD D++ AA+ AL G N
Sbjct: 229 KMITMTGSTVAGKQIYKTSA-EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANC 287
Query: 300 GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE 359
G++C R+YV +YDEF K + K VGDP D + GP+ ++++ D I +
Sbjct: 288 GQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVH 347
Query: 360 HGKREGATLLTGGKPI----GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
++GAT+ TGGK + G + EPT+ +V +D ++ E FGP++ ++K
Sbjct: 348 EAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVS 404
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 419 bits (1080), Expect = e-144
Identities = 119/418 (28%), Positives = 195/418 (46%), Gaps = 13/418 (3%)
Query: 1 MEGSLSNGSCKSLFKMPEI-KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKE 59
M L N + K + + + NG + G+ T P E IAR+ +
Sbjct: 2 MSTLLINQPQYAWLKELGLREENEGVYNGSWGGR--GEVITTYCPANNEPIARVRQASVA 59
Query: 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK 119
D + VK AR+A+ W +R I+ + D + E +VL L +L+ GK+
Sbjct: 60 DYEETVKKAREAWKI--WADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGV 117
Query: 120 MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQG-YTLREPIGVVGHIIPWNFPTTMFFM 178
G++ + Y G + I G +L R+ P+G+VG I +NFP ++
Sbjct: 118 -GEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGW 176
Query: 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIA 234
+ A+ G + K A T LI++ + + +P + ++ G G G A+A
Sbjct: 177 NNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMA 235
Query: 235 SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 294
++ +SFTGST VG+QV LELGG + ++ F+D D++ AL
Sbjct: 236 KDERVNLLSFTGSTQVGKQVGLMVQ-ERFGRSLLELGGNNAIIAFEDADLSLVVPSALFA 294
Query: 295 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI 354
+ G+ C + R+++ E I+DE +L + VG+P+DP V GP K+
Sbjct: 295 AVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMF 354
Query: 355 LSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
L +E K+EG T++ GGK + + G Y+EPTI T + D IA E F P++ + KF+
Sbjct: 355 LGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQ 412
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 416 bits (1071), Expect = e-143
Identities = 149/403 (36%), Positives = 225/403 (55%), Gaps = 11/403 (2%)
Query: 11 KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
SL + + +I GE+ + S TFE DP TGE++ + + + A++AA+
Sbjct: 8 PSLLR------HQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQA 61
Query: 71 AFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL 130
A+ W + ER I+ ++ DL+ +++ LA++ + GK + AK G+I AA+ +
Sbjct: 62 AWA--GWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAK-GEIAYAASFI 118
Query: 131 RYYAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT 189
++A ++ G+ L A + ++EPIGV I PWNFP M KV PALAAGC
Sbjct: 119 EWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCP 178
Query: 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD 249
++VKPAE TP AL A LA+ AGVP GVL+VV G G I S+ + K+SFTGST
Sbjct: 179 IVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTA 238
Query: 250 VGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 309
VGR +M +A +K ++LELGG +P ++FDD D++ A + A+ N G+ CV ++R
Sbjct: 239 VGRLLMAQSA-PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRF 297
Query: 310 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 369
+V E +YD F KL VG + GP +++ ++ S+I +GA+L+
Sbjct: 298 FVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLM 357
Query: 370 TGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
TGGK + EPT+ T V DM +AK E FGP+ L +F
Sbjct: 358 TGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFA 400
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 415 bits (1070), Expect = e-143
Identities = 150/405 (37%), Positives = 235/405 (58%), Gaps = 11/405 (2%)
Query: 9 SCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAA 68
+ +LF+ + INGE++D+ +G+ + +P G+ + + + ++ A+ AA
Sbjct: 3 NDSNLFR------QQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAA 56
Query: 69 RQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAAN 128
+A W + ER I+ + +L+ EH + LA L L+ GK + AK G+I AA+
Sbjct: 57 NRALPA--WRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAAS 113
Query: 129 TLRYYAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAG 187
+ ++A +I+G+ + +A + +++PIGV I PWNFP M K PALAAG
Sbjct: 114 FIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAG 173
Query: 188 CTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
CTM++KPA QTP AL A LA AGVP GV NVV G G + S+ + K+SFTGS
Sbjct: 174 CTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGS 233
Query: 248 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASS 307
T++GRQ+M+ A ++K VSLELGG +P ++FDD D++ A + AL N G+ CV ++
Sbjct: 234 TEIGRQLMEQCA-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCAN 292
Query: 308 RVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 367
R+YVQ+G+YD F +KL + +GD D V GP +D+K ++ +I +GA
Sbjct: 293 RLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGAR 352
Query: 368 LLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
++ GGK + G + +PTI +V + ++K E FGP+ L +FK
Sbjct: 353 VVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFK 397
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 413 bits (1065), Expect = e-142
Identities = 155/403 (38%), Positives = 238/403 (59%), Gaps = 13/403 (3%)
Query: 11 KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
SL K ++ +NG ++D+ G T + +P G I + + A+ A+ +
Sbjct: 28 PSLLK------SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAK 81
Query: 71 AFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL 130
A W + ER GI+ K+ DLI +A+ +A++ + GK + A+ G++ AA+ +
Sbjct: 82 ALSG--WAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEAR-GEVLYAASFI 138
Query: 131 RYYAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT 189
++A A +++G+ + + + +R+P+GV I PWNFP M K +PALAAGCT
Sbjct: 139 EWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCT 198
Query: 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD 249
MIV+PA+ TPL AL LA+ AG+P GVL +V G GA + S+ + K+SFTGST+
Sbjct: 199 MIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTE 258
Query: 250 VGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 309
VGR +M A +K +SLELGG +P ++FDD D++ A D A++ N G+ CV ++R+
Sbjct: 259 VGRLLMAQCA-PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRI 317
Query: 310 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 369
YVQ G+YD+F +KL K K VG+ +P V GP +++K ++ ++IE +GA L+
Sbjct: 318 YVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLI 377
Query: 370 TGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
TGGK +G G + EP I T VT DML+AK E FGP+ L F
Sbjct: 378 TGGKELG--GLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFD 418
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 413 bits (1063), Expect = e-142
Identities = 126/404 (31%), Positives = 206/404 (50%), Gaps = 12/404 (2%)
Query: 11 KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
L +I G + DS G TF+ +P TG IA++ +EDV AV+A +
Sbjct: 7 PLLEN------LTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQS 60
Query: 71 AFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL 130
A + RR + D ++E+ E + + ++ GK A+ G++ AA
Sbjct: 61 ALR--LTNPWPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAAGFF 117
Query: 131 RYYAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT 189
Y A + + P+GV G I+PWNFP M K+S ALAAGC
Sbjct: 118 DYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCP 177
Query: 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD 249
++KPA +TPL + F + +PDG++N+V G G + H D+ +SFTGST+
Sbjct: 178 SVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTE 237
Query: 250 VGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 309
VGR+++ A +K ++LELGG +P ++FDD D+ AAD + G+ CV ++R+
Sbjct: 238 VGRKLIVDTA-EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRI 296
Query: 310 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 369
+V E + D F +KL E+ VGD + + GP ++K+ FD++ +++ +GA+L+
Sbjct: 297 FVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLV 356
Query: 370 TGGKPIGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
G +P G + PT+ V +M + E FGP++ + F+
Sbjct: 357 AGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFR 400
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 422 bits (1088), Expect = e-139
Identities = 129/396 (32%), Positives = 195/396 (49%), Gaps = 15/396 (3%)
Query: 25 FINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
FING+ V + T++P + E + +I + +V A+ AA+ AF W
Sbjct: 535 FINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPR 590
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKIHG 142
R +LK A + L+ + L+ GK W + D+ A + L YYA ++
Sbjct: 591 TRAEYLLKAAQAARKRLFELSAWQVLEIGK--QWDQAYADVTEAIDFLEYYAREMIRLGQ 648
Query: 143 EVLKMSRALQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
+ + EP GV I PWNFP + S A+ G ++ KP+ T +I
Sbjct: 649 PQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSII 708
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT- 260
+ L + AG+P+GV N PG G G + H DI ++FTGS + G ++++ AA
Sbjct: 709 GWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKV 768
Query: 261 ----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
+N+K + E+GGK+ ++I DD D++ A L +G+ C A SRV V + +Y
Sbjct: 769 HPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVY 828
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376
D+F ++LV AKA VG DPA G D K I Y E GKREG L P
Sbjct: 829 DKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVP-A 887
Query: 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+GY++ TI + + IA+ EIFGPV+A+M+ K
Sbjct: 888 GEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAK 923
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 400 bits (1031), Expect = e-137
Identities = 145/407 (35%), Positives = 226/407 (55%), Gaps = 17/407 (4%)
Query: 11 KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
+L + T F+ G ++ + TF DP +G A+ +A+ + AV+AA +
Sbjct: 8 AALLR------TDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYE 59
Query: 71 AFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL 130
AF W S ER ++ K+ +L+ ++ + LA + ++GK A G+I +A L
Sbjct: 60 AFCR--WREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSAFFL 116
Query: 131 RYYAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT 189
+++ A +++G+++ + L++PIGV I PWNFP+ M KV ALAAGCT
Sbjct: 117 EWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCT 176
Query: 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTA---GAAIASHMDIDKVSFTG 246
++VKPAE TP AL A LA AG+P GV NV+P A G AI + + K+SFTG
Sbjct: 177 VVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTG 236
Query: 247 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
ST G+ ++ AA +++K VS+ELGG +P ++FD +V+ A A+ N G+ CV S
Sbjct: 237 STTTGKILLHHAA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCS 295
Query: 307 SRVYVQEGIYDEFEKKLVEKAKAW-VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG 365
++ VQ GI+D F K E K VG+ F+ QGP +++K +++ + +G
Sbjct: 296 NQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKG 355
Query: 366 ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
AT++TGGK + EPT+ NVT+DML E FGP+ ++KF
Sbjct: 356 ATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFD 402
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 379 bits (975), Expect = e-129
Identities = 107/378 (28%), Positives = 163/378 (43%), Gaps = 5/378 (1%)
Query: 35 SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFAD 94
+ +++P TG+ +A + + ++++ A+ A F W S A+R +
Sbjct: 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKK--WKMTSVAQRAQTLRDIGQ 62
Query: 95 LIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGY 154
+ HAE +A + GK A+ ++ +A +YA + + Q
Sbjct: 63 ALRAHAEEMAQCITREMGKPIKQAR-AEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAV 121
Query: 155 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 214
P+GV+ I+PWNFP P L AG + ++K A A A + AG
Sbjct: 122 IEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGT 181
Query: 215 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 274
P GV V I I V+ TGS G + A + LK LELGG
Sbjct: 182 PAGVYGWVNANNEGVSQMIN-DPRIAAVTVTGSVRAGAAIGAQAG-AALKKCVLELGGSD 239
Query: 275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334
P ++ +D D+ A A+ G N G++C A+ R V+EGI F + V A A +GD
Sbjct: 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGD 299
Query: 335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDM 394
P GP D + ++ EGA LL GG+ I +G Y T+ +VT DM
Sbjct: 300 PLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDM 359
Query: 395 LIAKNEIFGPVMALMKFK 412
+ E+FGPV A+ K
Sbjct: 360 TAFRQELFGPVAAITVAK 377
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 377 bits (971), Expect = e-128
Identities = 99/375 (26%), Positives = 165/375 (44%), Gaps = 5/375 (1%)
Query: 38 TFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97
+++++P T EA A + +D A+ A + W A R I+ A+ ++
Sbjct: 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKK--WRHEEPASRAEILHDIANALK 62
Query: 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLR 157
EH + LA + L+ GKL S +K ++ + YYA ++ S Y L+
Sbjct: 63 EHEDELAKMMTLEMGKLLSESK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLK 121
Query: 158 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 217
+ GV+ PWNFP +P G +++K A P A A + K AG P+G
Sbjct: 122 QSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEG 181
Query: 218 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277
L + IA I V+ TGS G V +AA NLK ++ELGG +
Sbjct: 182 SLINLYPSYDQLADIIA-DPRIQGVALTGSERGGSAVAEAAG-KNLKKSTMELGGNDAFI 239
Query: 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337
+ DD D ++ +N G++C +S R+ V++ YDE +L GDP +
Sbjct: 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLE 299
Query: 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIA 397
P +K +++ + ++ GA + I KG + PTI T++ +D +
Sbjct: 300 ADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVF 359
Query: 398 KNEIFGPVMALMKFK 412
E+FGP+ + +
Sbjct: 360 DKEVFGPIAEVFVVE 374
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 375 bits (966), Expect = e-127
Identities = 79/404 (19%), Positives = 141/404 (34%), Gaps = 37/404 (9%)
Query: 31 VDSVSGKTFETIDPRTGEAIA-RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIM 89
++ + F + TGEA+ + +V+ A AA + + R + ++R ++
Sbjct: 1 MNPQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLL 58
Query: 90 LKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR 149
A +E ++ + L+ G+I AN LR +A + +
Sbjct: 59 RTIASELEARSDDIIARAHLETALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDT 117
Query: 150 ALQG---------YTLREPIGVVGHIIPWNFP--TTMFFMKVSPALAAGCTMIVKPAEQT 198
+ +G V NFP + + ALAAGC +IVK
Sbjct: 118 PNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAH 177
Query: 199 PLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254
P + A + A +P + ++ G G A+ SH +I V FTGS GR +
Sbjct: 178 PGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRAL 237
Query: 255 MQAAA-TSNLKPVSLELGGKSPLLIFDDVDVNTA--ADMALLGILFNKGEICVASSRVYV 311
A P ELG +P IF A AD + + G+ C V+
Sbjct: 238 FNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFA 297
Query: 312 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 371
+ +E A++ + P+ P + + + G +G +
Sbjct: 298 LNTPETQ---AFIETAQS--LIRQQSPSTLLTPGIRDSYQSQ---VVSRGSDDGIDVTFS 349
Query: 372 GKPIGKKGYYIEPTIFTNVTEDML---IAKNEIFGPVMALMKFK 412
+ +F +E+ + EIFGP ++ +
Sbjct: 350 QAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCE 389
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 321 bits (825), Expect = e-106
Identities = 69/364 (18%), Positives = 132/364 (36%), Gaps = 20/364 (5%)
Query: 53 IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAG 112
+ + ++D + ++A + + +S + I + + LA ++G
Sbjct: 1 MPVTNMAELDAMIARVKKAQEE--FATYSQEQVDKIFRAASLAANQARIPLAQQAVEESG 58
Query: 113 KLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFP 172
K+ A+ + Y ++ G +L+ L T+ EP+G++ I+P P
Sbjct: 59 MGIVEDKVIKNHFASEFI-YNKYKDEQTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNP 116
Query: 173 TTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL----AKLAGVPDGVLNVVPGFGPT 228
T+ K +L +I P + A L A AG P ++ +
Sbjct: 117 TSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVE 176
Query: 229 AGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAA 288
A+ H DI + TG + + AA S+ KP G P++I + D+ A
Sbjct: 177 LSNALMKHDDIALILATGGPGMVK-----AAYSSGKPAIGVGAGNVPVVIDETADIKRAV 231
Query: 289 DMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDK 348
L+ F+ G +C + V V + +YDE +++ + D VR+ +D
Sbjct: 232 ASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDADK-VRKVLLIDG 290
Query: 349 KQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 408
+I+ E A G + + V+ D A E P + +
Sbjct: 291 ALNAKIVGQPATAIAEMA-----GVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGM 344
Query: 409 MKFK 412
+
Sbjct: 345 FRAD 348
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 321 bits (825), Expect = e-106
Identities = 89/415 (21%), Positives = 141/415 (33%), Gaps = 44/415 (10%)
Query: 22 TKLFINGEFVDSV-SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRF 80
K + GE++D + + P A+ G E V+ A +AA +AF +
Sbjct: 30 GKHLVAGEWLDGAGTFASAPAHGPAHDFAV-----GTVELVNRACEAAEEAFW--TYGYS 82
Query: 81 SGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA--- 137
S ER + AD IE AE + + + + G + G+ LR +A
Sbjct: 83 SRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKG 141
Query: 138 ---DKIHGEVLKMSRALQG---YTLREPIGVVGHIIPWNFPTTMFFM--KVSPALAAGCT 189
D+ + + ++ P+G V NFP + ALAAGC
Sbjct: 142 DYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCP 201
Query: 190 MIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 245
++VK P A + GV GV +++ G G A+ H I V FT
Sbjct: 202 VVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFT 261
Query: 246 GSTDVGRQVM-QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA---LLGILFNKGE 301
GS GR + AA P ELG +P+ + + A + + G+
Sbjct: 262 GSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQ 321
Query: 302 ICVASSRVYVQEGI-YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH 360
C V EG D F VE + + + + +F
Sbjct: 322 FCTNPGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARF--------- 372
Query: 361 GKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKN---EIFGPVMALMKFK 412
R L + G P +F L E+FGP+ +++
Sbjct: 373 ATRNAVKPLLATES---SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVG 424
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 315 bits (809), Expect = e-104
Identities = 141/396 (35%), Positives = 212/396 (53%), Gaps = 9/396 (2%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW 77
EI+ K +INGE+V+S + + + ++P T E + ++ KED+D A + A +AF W
Sbjct: 2 EIRKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TW 59
Query: 78 PRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 137
+ + R I+ F L+ +H E LA L ++ GK A G++ + + AGA
Sbjct: 60 SKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAP 118
Query: 138 DKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
+ G+ L ++ ++ R PIGVVG I P+NFP + A+A G T I+KP+E
Sbjct: 119 SLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSE 178
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
+TPL+ L + AG+P GV NVV G I H +I +SF GS VG V
Sbjct: 179 RTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYV-Y 236
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF-NKGEICVASSRVYVQEGI 315
+ NLK V G K+ ++ +D ++ ++G F + GE C+A + V V+EGI
Sbjct: 237 KKGSENLKRVQSLTGAKNHTIVLNDANLEDTVT-NIVGAAFGSAGERCMACAVVTVEEGI 295
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375
DEF KL EK +G+ D V GP + + R LSYIE G EGA L+ G+
Sbjct: 296 ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGREN 355
Query: 376 G-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMK 410
GY++ PTIF NVT +M I K+EIF PV+++++
Sbjct: 356 VSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIR 391
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 308 bits (792), Expect = e-101
Identities = 130/409 (31%), Positives = 202/409 (49%), Gaps = 13/409 (3%)
Query: 9 SCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAA 68
++L+ + FI+G+ V SG+ +P TGE +A D+ AV++A
Sbjct: 14 GTENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESA 73
Query: 69 RQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAAN 128
+ A W + R + +KF L+ ++ LA + + + GK AK GDI
Sbjct: 74 KAAQP--KWAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGLE 130
Query: 129 TLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAG 187
+ G E + + Y++R+P+G+ I P+NFP + +PA+A G
Sbjct: 131 VCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACG 190
Query: 188 CTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
I+KP+E+ P + + A L AG+P G+LNVV G A AI +H DI VSF GS
Sbjct: 191 NAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGS 249
Query: 248 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF-NKGEICVA- 305
T + R V A N K G K+ ++I D D++ AA+ AL+G + + GE C+A
Sbjct: 250 TPIARYV-YGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAAN-ALIGAGYGSAGERCMAI 307
Query: 306 SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG 365
S V V E + KLV ++ +G D GP V K+ RI S I+ G +G
Sbjct: 308 SVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQG 367
Query: 366 ATLLTGGK----PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMK 410
A L+ G+ + G++I +F +VT DM I K EIFGPV+++++
Sbjct: 368 AKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVR 416
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 320 bits (822), Expect = e-101
Identities = 115/406 (28%), Positives = 177/406 (43%), Gaps = 16/406 (3%)
Query: 14 FKMPEIKFTKLFINGEFVD---SVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
+P F N V+ + T + IA+ + AV AAR
Sbjct: 502 IPLPCDLFAPERRNSRGVEFGARTALDQLLTDVKAETGDLKPIADATPDQAHAAVAAARA 561
Query: 71 AFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL 130
F W R R + + A L+E + L + GK A + ++ AA+
Sbjct: 562 GFAG--WSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDA-LSELREAADFC 618
Query: 131 RYYAGAADKIHGEVLKMSRAL--QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGC 188
RYYA K+ G M GV I PWNFP +F +V+ AL AG
Sbjct: 619 RYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGN 678
Query: 189 TMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 248
+++ KPAEQTP IA L AG+P L +V G G GAA+ +H DI V FTGST
Sbjct: 679 SVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGR-IGAALTAHPDIAGVVFTGST 737
Query: 249 DVGRQVMQAAATSN--LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
+V R + +A A + + P+ E GG + ++ AD + + G+ C A
Sbjct: 738 EVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSAL 797
Query: 307 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGA 366
++VQE + D + + A+ +GDP D A GP +D + R+ ++I K E
Sbjct: 798 RLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEAR 857
Query: 367 TLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
G P +G ++ P IF + E+FGP++ +++++
Sbjct: 858 LHFAGPAP---EGCFVAPHIFELT--EAGQLTEEVFGPILHVVRYR 898
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 272 bits (698), Expect = 2e-86
Identities = 96/399 (24%), Positives = 167/399 (41%), Gaps = 15/399 (3%)
Query: 24 LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
+ E V + + P +A+ DK ++ A+ AA A W
Sbjct: 66 CVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKE--WDLKPM 121
Query: 83 AERRGIMLKFADLIE-EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
A+R + LK AD++ + + GK A++ + R+ A A ++
Sbjct: 122 ADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELE 181
Query: 142 GEV-LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
GE + + + R G V I P+NF + G ++ KP++ L
Sbjct: 182 GEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNL-AGAPALMGNVVLWKPSDTAML 240
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
+ + + AG+P ++ VP GPT G + S + ++FTGS + + + A
Sbjct: 241 ASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQ 300
Query: 261 S-----NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
+ ++ E GGK+ + DV++ L G+ C A SR+YV + +
Sbjct: 301 NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSL 360
Query: 316 YDEFEKKLVEKAKAWVVGDPF-DPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGK 373
+ + + +L+E+ VGDP D +D K F RI ++EH + ++L GG+
Sbjct: 361 WPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQ 420
Query: 374 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
GYY+EP I + I K EIFGPV+ + +
Sbjct: 421 CNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYP 459
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 254 bits (652), Expect = 1e-80
Identities = 63/368 (17%), Positives = 121/368 (32%), Gaps = 38/368 (10%)
Query: 58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSW 117
++V +++A +A S + I+ AD E LA + + G
Sbjct: 11 IQEVRNLIESANKAQKE--LAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQ 68
Query: 118 AKMGDIPGAANTLRYYAGAADKIHGE-VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMF 176
K+ A+ ++ + +LK + + P+GVV +IP PT+
Sbjct: 69 DKVIKNVFAS---KHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTV 125
Query: 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHL----AKLAGVPDGVLNVVPGFGPTAGAA 232
K ++ AG +++ P L + A+ AG P G ++ +
Sbjct: 126 IYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQ 185
Query: 233 IASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMAL 292
+ H D + TG + + + AA S+ P G P I ++ A L
Sbjct: 186 LMKHKDTAVILATGGSAMVK-----AAYSSGTPAIGVGPGNGPAFIERSANIPRAVKHIL 240
Query: 293 LGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD--------PFDPAVRQGP 344
F+ G IC + V V+ + + ++ ++ P P
Sbjct: 241 DSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNP 300
Query: 345 QVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 404
+ K I + A +L + T V + ++ E P
Sbjct: 301 AIVGKSVQHIANLAGLTVPADARVLIAEE--------------TKVGAKIPYSR-EKLAP 345
Query: 405 VMALMKFK 412
++A +
Sbjct: 346 ILAFYTAE 353
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 212 bits (541), Expect = 3e-64
Identities = 101/378 (26%), Positives = 158/378 (41%), Gaps = 57/378 (15%)
Query: 59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEAL--DAGKLHS 116
+ AVK AR AF G R + LI+E + ++ AL D K
Sbjct: 18 SKISEAVKRARAAFSSGRTR--PLQFRIQQLEALQRLIQEQEQ--ELVGALAADLHKNEW 73
Query: 117 WAKMGDIPGAANTLRYYAGAADKIHG----EVLKMSRALQG---YTLREPIGVVGHIIPW 169
A ++ + Y K+ E ++ + Q Y EP+GVV I W
Sbjct: 74 NAYYEEVVYVLEEIEY---MIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTW 130
Query: 170 NFPTTMFFMKVSP---ALAAGCTMIVKPAEQTP--------LIALYFAHLAKLAGVPDGV 218
N+P F + + P A+AAG +++KP+E + +I Y D
Sbjct: 131 NYP---FNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLD--------KDLY 179
Query: 219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278
V+ G G + D + +TGST VG+ +M AAA +L PV+LELGGKSP +
Sbjct: 180 -PVING-GVPETTELLKE-RFDHILYTGSTGVGKIIMTAAA-KHLTPVTLELGGKSPCYV 235
Query: 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338
+ D++ A G N G+ CVA + I ++ +KL + K + D
Sbjct: 236 DKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDA--- 292
Query: 339 AVRQGPQ----VDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDM 394
++ + + F R++ IE K + GG YI PTI T+V
Sbjct: 293 --KKSRDYGRIISARHFQRVMGLIEGQK-----VAYGGT-GDAATRYIAPTILTDVDPQS 344
Query: 395 LIAKNEIFGPVMALMKFK 412
+ + EIFGPV+ ++ +
Sbjct: 345 PVMQEEIFGPVLPIVCVR 362
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 195 bits (498), Expect = 5e-58
Identities = 90/379 (23%), Positives = 159/379 (41%), Gaps = 57/379 (15%)
Query: 57 DKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEAL--DAGKL 114
+D A + F R+ + + + + + E A+ AL D GK
Sbjct: 26 SPAKIDSLFSAQKAYFATRATA--DVGFRKQSLERLKEAVINNKE--ALYSALAEDLGKP 81
Query: 115 HSWAKMGDIPGAANTLRYYAGAADKIH----------GEVLKMSRALQGYTLREPIGVVG 164
+ +I + + + A + +++ S Y ++EP GV
Sbjct: 82 KDVVDLAEIGAVLHEIDF---ALAHLDEWVAPVSVPSPDIIAPSEC---YVVQEPYGVTY 135
Query: 165 HIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPAEQTP--------LIALYFAHLAKLAG 213
I P+N+P + ++P A+ G T I+KP+E TP +IA F
Sbjct: 136 IIGPFNYP---VNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAF-------- 184
Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
+ V+ G G + + S D + FTGS +VG+ VMQAAA +L PV LELGGK
Sbjct: 185 -APEYVAVIQG-GRDENSHLLSL-PFDFIFFTGSPNVGKVVMQAAA-KHLTPVVLELGGK 240
Query: 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333
PL++ D D++ + + G N G+ +A +YV + D ++LVE+ K +
Sbjct: 241 CPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTELPE 300
Query: 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTED 393
+ V ++Q R++S +E + + G + T+ V +
Sbjct: 301 INSTGKL-----VTERQVQRLVSLLEATQGQVLV----GSQADVSKRALSATVVDGVEWN 351
Query: 394 MLIAKNEIFGPVMALMKFK 412
+ E+FGP++ +++F
Sbjct: 352 DPLMSEELFGPILPVLEFD 370
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.2 bits (111), Expect = 9e-06
Identities = 54/381 (14%), Positives = 108/381 (28%), Gaps = 96/381 (25%)
Query: 11 KSLFKMPEIKFTKLFINGEFVDSV-SGKTFETIDPRTGEAIARI--AEGDKEDVDL--AV 65
+ L K + L + + +V + K + + +I K+ D A
Sbjct: 235 RRLLKSKPYE-NCLLV----LLNVQNAKAWNAFNLS-----CKILLTTRFKQVTDFLSAA 284
Query: 66 KAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS---WAKMGD 122
+ DH + E + ++LK+ D + L E L + D
Sbjct: 285 TTTHISLDHHSMT-LTPDEVKSLLLKYLDCRPQD---LPR-EVLTTNPRRLSIIAESIRD 339
Query: 123 IPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLRE--------------PIGVVGHII 167
+ ++ DK+ +++ S L+ R+ P ++ +
Sbjct: 340 GLATWDNWKHVN--CDKLT-TIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLS--L 394
Query: 168 PWNFPTTMFFMKVSPALAAGCTMIVK-PAEQTPLI-ALYFAHLAKLAGVPD--------- 216
W M V L ++ K P E T I ++Y KL
Sbjct: 395 IWFDVIKSDVMVVVNKLHKYS-LVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHY 453
Query: 217 GVLNVVPGFGPTAGAA-------IASHMDIDKVSFTGSTDVGRQV------MQAAATSNL 263
+ I H+ + + R V ++ +
Sbjct: 454 NIPKTFDSDDLIPPYLDQYFYSHIGHHLK--NIEHPERMTLFRMVFLDFRFLEQK----I 507
Query: 264 KPVSLELGGKSPLL------------IFDDVDVNTAADMALLGILFNKGEICVAS--SRV 309
+ S +L I D+ A+L L E + S + +
Sbjct: 508 RHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDL 567
Query: 310 YVQ-------EGIYDEFEKKL 323
++ E I++E K++
Sbjct: 568 -LRIALMAEDEAIFEEAHKQV 587
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 4e-05
Identities = 46/339 (13%), Positives = 88/339 (25%), Gaps = 113/339 (33%)
Query: 133 YAGAADKIHGEVLKMSRALQGY-TLREPIGVVGHII-PWNFPTTMFFMKVSPALAAGCTM 190
Y I E + S + Y R+ + + +N ++K+ AL +
Sbjct: 91 YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQAL-----L 145
Query: 191 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPT--AGAAIASHMDIDKVSFT--- 245
++PA + + GVL G G T A S+ K+ F
Sbjct: 146 ELRPA---KNVLID------------GVL----GSGKTWVALDVCLSYKVQCKMDFKIFW 186
Query: 246 ---GSTDVGRQVMQAAAT--SNLKPVSLELGGKSP------------------------- 275
+ + V++ + P S
Sbjct: 187 LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC 246
Query: 276 LLIFDDV-DVNTAADMALLG--ILFNKGEICVASS------RVYVQEGIYDEFEKKLVEK 326
LL+ +V + L IL V + V+
Sbjct: 247 LLVLLNVQNAKAWNAFN-LSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305
Query: 327 --AKAWVVGDPFD---------P--------AVRQGP-------QVDKKQFDRIL-SYIE 359
K ++ P D P ++R G V+ + I+ S +
Sbjct: 306 LLLK-YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364
Query: 360 HGKREGATLLTGGKPIGKKGYYIEPTIF---TNVTEDML 395
L +P + + ++F ++ +L
Sbjct: 365 V-------L----EPAEYRKMFDRLSVFPPSAHIPTILL 392
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 414 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 90.58 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-94 Score=728.47 Aligned_cols=393 Identities=42% Similarity=0.730 Sum_probs=375.8
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015020 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (414)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (414)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++||++|++||+ .|+++|..+|.++|++++++|++
T Consensus 4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l~~ 81 (490)
T 2wme_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRE 81 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHH
Confidence 4456899999999988889999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHH
Q 015020 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (414)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (414)
|+++|++++++|+|||+.+++..|+..+++.++||+.+++++.+...+...+...+++++|+|||++|+|||||+...++
T Consensus 82 ~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~ 161 (490)
T 2wme_A 82 RNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALW 161 (490)
T ss_dssp THHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhhh
Confidence 99999999999999999999864699999999999999988877777666677789999999999999999999999999
Q ss_pred hHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHH
Q 015020 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (414)
Q Consensus 179 ~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (414)
++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++.+
T Consensus 162 ~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~ 241 (490)
T 2wme_A 162 KSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASA 241 (490)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred hHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999998766
Q ss_pred HhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCC
Q 015020 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (414)
Q Consensus 259 ~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~ 338 (414)
+.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.++
T Consensus 242 a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~ 321 (490)
T 2wme_A 242 SSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDE 321 (490)
T ss_dssp HHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccc
Confidence 54789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++|||+++.+++++.++|++++++||++++||.+.. .+|+|++||||.+++++|++++||+||||++|++|++
T Consensus 322 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 400 (490)
T 2wme_A 322 NTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDD 400 (490)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESC
T ss_pred cCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCC
Confidence 99999999999999999999999999999999998643 3689999999999999999999999999999999986
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-90 Score=706.89 Aligned_cols=407 Identities=38% Similarity=0.655 Sum_probs=376.6
Q ss_pred CCCCCcccccccCCCCccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhc--ccCCCCCC
Q 015020 3 GSLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAF--DHGPWPRF 80 (414)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~--~~~~w~~~ 80 (414)
||++...-+.-|........++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| . .|+.+
T Consensus 14 ~~~~~~~~~~~m~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~--~w~~~ 91 (520)
T 3ed6_A 14 GTENLYFQSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG--EWSQE 91 (520)
T ss_dssp -----CHHHHHHHHGGGSCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTTS
T ss_pred CCCCccccccccccccccCCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc--ccccC
Confidence 4444433333333333345678999999988778899999999999999999999999999999999999 8 89999
Q ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecC
Q 015020 81 SGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREP 159 (414)
Q Consensus 81 ~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P 159 (414)
+..+|.++|++++++|++++++|++++++|+|||+.+++. |+..+++.+++++.++++..+...+.. .+...++.++|
T Consensus 92 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P 170 (520)
T 3ed6_A 92 TAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYA-DMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEP 170 (520)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccC
Confidence 9999999999999999999999999999999999999996 999999999999999887766554433 45677899999
Q ss_pred CceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCc
Q 015020 160 IGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDI 239 (414)
Q Consensus 160 ~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v 239 (414)
+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+|
T Consensus 171 ~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~v 250 (520)
T 3ed6_A 171 VGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEV 250 (520)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTC
T ss_pred ccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999877899999999999
Q ss_pred CEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHH
Q 015020 240 DKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319 (414)
Q Consensus 240 ~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f 319 (414)
+.|+||||+.+|+.|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|
T Consensus 251 d~V~FTGS~~vG~~i~~~aa-~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f 329 (520)
T 3ed6_A 251 DLVSFTGGIETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKF 329 (520)
T ss_dssp SEEEEESCHHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHH
T ss_pred CEEEEECCHHHHHHHHHHhh-hcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHH
Confidence 99999999999999999999 88999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCCeEeeEEEeeCCCCCc
Q 015020 320 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDML 395 (414)
Q Consensus 320 ~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~ 395 (414)
+++|+++++++++|+|.|+++++||++++.+++++.++|++++++||++++||.... ..|+|++||||.+++++|+
T Consensus 330 ~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~ 409 (520)
T 3ed6_A 330 EQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMR 409 (520)
T ss_dssp HHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSH
T ss_pred HHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCc
Confidence 999999999999999999999999999999999999999999999999999998642 4699999999999999999
Q ss_pred ccccccccceeeEEEEec
Q 015020 396 IAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 396 i~~~E~fgPv~~v~~~~~ 413 (414)
+++||+||||++|++|++
T Consensus 410 i~~eEiFGPVl~v~~~~~ 427 (520)
T 3ed6_A 410 IVQEEVFGPVVTVEGFET 427 (520)
T ss_dssp HHHSCCCSSEEEEEEESS
T ss_pred cccCceeCcEEEEEEeCC
Confidence 999999999999999986
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-90 Score=700.55 Aligned_cols=390 Identities=37% Similarity=0.621 Sum_probs=372.4
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 11 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 88 (484)
T 3ifg_A 11 LRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIAN 88 (484)
T ss_dssp SCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 345789999999877788999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecCCceEEEEcCCchhHHhhHH
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (414)
+++|++++++|+|||+.+++. |+..+++.+++++.++++..+...+.. .+...++.++|+|||++|+|||||+...++
T Consensus 89 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 167 (484)
T 3ifg_A 89 SDDLALILTTEQGKPLAEAKG-EIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIAR 167 (484)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHH
Confidence 999999999999999999986 999999999999998877665544432 456788999999999999999999999999
Q ss_pred hHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHH
Q 015020 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (414)
Q Consensus 179 ~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (414)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++.++++.|++||+|+.|+||||+.+|+.|++.+
T Consensus 168 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~a 247 (484)
T 3ifg_A 168 KVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQS 247 (484)
T ss_dssp HHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHT
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred HhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCC
Q 015020 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (414)
Q Consensus 259 ~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~ 338 (414)
+ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++
T Consensus 248 a-~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 326 (484)
T 3ifg_A 248 A-PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTES 326 (484)
T ss_dssp G-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred h-ccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 8 889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++|||+++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 327 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 401 (484)
T 3ifg_A 327 GATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFAS 401 (484)
T ss_dssp TCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECC
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCC
Confidence 999999999999999999999999999999999987544799999999999999999999999999999999986
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-90 Score=699.03 Aligned_cols=391 Identities=32% Similarity=0.583 Sum_probs=373.7
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015020 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (414)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (414)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 86 (506)
T 3rh9_A 9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKE 86 (506)
T ss_dssp GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 4556899999999887788999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeee-cCCceEEEEcCCchhHHhhH
Q 015020 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLR-EPIGVVGHIIPWNFPTTMFF 177 (414)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~p~n~P~~~~~ 177 (414)
++++|++++++|+|||+.+++. |+..+++.+++++.++++..+...+...+...++.+ +|+|||++|+|||||+...+
T Consensus 87 ~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 165 (506)
T 3rh9_A 87 NREEIGRILCMEHGKPWKEAQG-EVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIA 165 (506)
T ss_dssp THHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHH
Confidence 9999999999999999999995 999999999999999988766655433456678888 99999999999999999999
Q ss_pred HhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHH
Q 015020 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (414)
Q Consensus 178 ~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (414)
+++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|++||+||.|+||||+.+|+.|++.
T Consensus 166 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~ 245 (506)
T 3rh9_A 166 KKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVD 245 (506)
T ss_dssp HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCC
Q 015020 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (414)
Q Consensus 258 ~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 337 (414)
++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 246 aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 324 (506)
T 3rh9_A 246 TA-EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN 324 (506)
T ss_dssp TT-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTS
T ss_pred hh-hcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 98 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC-CCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++++||++++++++++.++|++++++||++++||...+. .|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 325 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 401 (506)
T 3rh9_A 325 DGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRT 401 (506)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred cCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCC
Confidence 9999999999999999999999999999999999986433 799999999999999999999999999999999986
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-89 Score=694.86 Aligned_cols=409 Identities=54% Similarity=0.916 Sum_probs=372.6
Q ss_pred CCCcccccccCCCCc---cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccC-CCCCC
Q 015020 5 LSNGSCKSLFKMPEI---KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRF 80 (414)
Q Consensus 5 ~~~~~~~~~~~~~~~---~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~ 80 (414)
||+++|++...-... ...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||++| .|+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~ 80 (501)
T 1bxs_A 1 MSSSAMPDVPAPLTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTM 80 (501)
T ss_dssp -------CCCCCCSSCCCCCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHS
T ss_pred CCcccCCcccCccccccccccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhC
Confidence 345555555432222 22468999999987667899999999999999999999999999999999999732 49999
Q ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCC
Q 015020 81 SGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPI 160 (414)
Q Consensus 81 ~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 160 (414)
+..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.+++++++++++.+...+...+...++.++|+
T Consensus 81 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~ 160 (501)
T 1bxs_A 81 DASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPV 160 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCC
Confidence 99999999999999999999999999999999999987545999999999999999887766544433445678999999
Q ss_pred ceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcC
Q 015020 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDID 240 (414)
Q Consensus 161 Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~ 240 (414)
|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+||
T Consensus 161 GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~ 240 (501)
T 1bxs_A 161 GVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVD 240 (501)
T ss_dssp CEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCS
T ss_pred ceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999997778999999999999
Q ss_pred EEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHH
Q 015020 241 KVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320 (414)
Q Consensus 241 ~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~ 320 (414)
.|+||||+.+|+.|++.++.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+
T Consensus 241 ~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~ 320 (501)
T 1bxs_A 241 KVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFV 320 (501)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHH
Confidence 99999999999999998875688999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccc
Q 015020 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNE 400 (414)
Q Consensus 321 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E 400 (414)
++|+++++++++|||.++++++||++++.+++++.++|++++++|+++++||......|+|++||||.+++++|++++||
T Consensus 321 ~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE 400 (501)
T 1bxs_A 321 RRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEE 400 (501)
T ss_dssp HHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSC
T ss_pred HHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcc
Confidence 99999999999999999999999999999999999999999999999999997643469999999999999999999999
Q ss_pred cccceeeEEEEec
Q 015020 401 IFGPVMALMKFKI 413 (414)
Q Consensus 401 ~fgPv~~v~~~~~ 413 (414)
+||||++|++|++
T Consensus 401 iFGPVl~v~~~~~ 413 (501)
T 1bxs_A 401 IFGPVQQIMKFKS 413 (501)
T ss_dssp CCSSEEEEEEECC
T ss_pred cccceEEEEEeCC
Confidence 9999999999986
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-89 Score=695.78 Aligned_cols=392 Identities=43% Similarity=0.795 Sum_probs=368.6
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 015020 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (414)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (414)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||++|.|+.+|..+|.++|++++++|+++++
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 46899999998656778999999999999999999999999999999999974459999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec----cCCccceeeecCCceEEEEcCCchhHHhhH
Q 015020 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM----SRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (414)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (414)
+|++++++|+|||+.+++..|+..+++.+++++.++++..+...+. ..+...++.++|+|||++|+|||||+...+
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 9999999999999999973499999999999999988766654443 122356899999999999999999999999
Q ss_pred HhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHH
Q 015020 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (414)
Q Consensus 178 ~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (414)
+++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~ 276 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877889999999999999999999999999998
Q ss_pred HHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCC
Q 015020 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (414)
Q Consensus 258 ~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 337 (414)
++.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||++
T Consensus 277 aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~ 356 (517)
T 2o2p_A 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLE 356 (517)
T ss_dssp HHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTS
T ss_pred hHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 87457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++++|||+++.+++++.++|++++++||++++||......|+|++||||.+++++|++++||+||||++|++|++
T Consensus 357 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 432 (517)
T 2o2p_A 357 RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFAD 432 (517)
T ss_dssp TTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECT
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCC
Confidence 9999999999999999999999999999999999986433699999999999999999999999999999999987
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-89 Score=695.76 Aligned_cols=391 Identities=41% Similarity=0.720 Sum_probs=373.2
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhc--ccCCCCCCCHHHHHHHHHHHHHH
Q 015020 19 IKFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAF--DHGPWPRFSGAERRGIMLKFADL 95 (414)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~--~~~~w~~~~~~~R~~~L~~~a~~ 95 (414)
+...++||||+|+.+.++++++++||+| |+++++++.++.+|+++|+++|++|| . .|+.++..+|.++|+++++.
T Consensus 20 ~~~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~ 97 (528)
T 3u4j_A 20 KSRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAG--PWPRMSGAERSRLMFKVADL 97 (528)
T ss_dssp CCBCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTS--SGGGSCHHHHHHHHHHHHHH
T ss_pred ccccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHH
Confidence 3457899999999887788999999999 99999999999999999999999999 7 89999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecCCceEEEEcCCchhHH
Q 015020 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTT 174 (414)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~ 174 (414)
|++++++|++++++|+|||+.+++. |+..+++.++++++++++..+...+.. .+...++.++|+|||++|+|||||+.
T Consensus 98 l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 176 (528)
T 3u4j_A 98 ILARQEELALIESLEVGKPIAQARG-EIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFI 176 (528)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHH
Confidence 9999999999999999999999975 999999999999999987766555433 45668899999999999999999999
Q ss_pred hhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHH
Q 015020 175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (414)
Q Consensus 175 ~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i 254 (414)
..++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|+.||+||.|+||||+.+|+.|
T Consensus 177 ~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 256 (528)
T 3u4j_A 177 IASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKL 256 (528)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999877899999999999999999999999999
Q ss_pred HHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCC
Q 015020 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334 (414)
Q Consensus 255 ~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~ 334 (414)
++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+
T Consensus 257 ~~~aa-~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 335 (528)
T 3u4j_A 257 GEIAA-RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGD 335 (528)
T ss_dssp HHHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEEC
T ss_pred HHHHH-hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCC
Confidence 99998 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC-CCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 335 p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
|.++++++||++++++++++.++|++++++||++++||..... .|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 336 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 415 (528)
T 3u4j_A 336 PLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKT 415 (528)
T ss_dssp TTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCC
Confidence 9999999999999999999999999999999999999986533 799999999999999999999999999999999986
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-89 Score=695.15 Aligned_cols=387 Identities=39% Similarity=0.691 Sum_probs=370.4
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 015020 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (414)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (414)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 109 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIANA 109 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999877788999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecCCceEEEEcCCchhHHhhHHh
Q 015020 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (414)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (414)
++|++++++|+|||+.+++. |+..+++.+++|+.++++..+...+.. .+...++.++|+|||++|+|||||+...+++
T Consensus 110 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 188 (504)
T 3ek1_A 110 DDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRK 188 (504)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHH
Confidence 99999999999999999987 999999999999999887665544432 3466889999999999999999999999999
Q ss_pred HhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHH
Q 015020 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (414)
Q Consensus 180 l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (414)
+++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|++||+|+.|+||||+.+|+.|++.++
T Consensus 189 ~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 268 (504)
T 3ek1_A 189 AAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268 (504)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCC
Q 015020 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (414)
Q Consensus 260 ~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 339 (414)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 269 -~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 347 (504)
T 3ek1_A 269 -PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPG 347 (504)
T ss_dssp -GGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred -hhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCcccc
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++||++++.+++++.++|++++++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 348 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 419 (504)
T 3ek1_A 348 VVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDT 419 (504)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECC
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCC
Confidence 99999999999999999999999999999999976 3689999999999999999999999999999999986
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-89 Score=691.24 Aligned_cols=392 Identities=39% Similarity=0.681 Sum_probs=370.0
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||++|.|+.+|..+|.++|+++++.|+++
T Consensus 7 ~~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~ 86 (495)
T 3b4w_A 7 EYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAER 86 (495)
T ss_dssp ECSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHH
Confidence 44578999999987667899999999999999999999999999999999999744699999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHh
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (414)
+++|++++++|+|||+.+++..|+..+++.+++++++++++.+...+...+...++.++|+|||++|+|||||+...+++
T Consensus 87 ~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (495)
T 3b4w_A 87 KDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNK 166 (495)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHHHH
Confidence 99999999999999999997349999999999999988887666544333346789999999999999999999999999
Q ss_pred HhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHH
Q 015020 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (414)
Q Consensus 180 l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (414)
+++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.++++.|++||++|.|+||||+.+|+.|++.++
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 245 (495)
T 3b4w_A 167 IAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAA 245 (495)
T ss_dssp HHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 8789999999999999999999999999999998
Q ss_pred hCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCC
Q 015020 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (414)
Q Consensus 260 ~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 339 (414)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++
T Consensus 246 -~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 324 (495)
T 3b4w_A 246 -EMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPA 324 (495)
T ss_dssp -HTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTT
T ss_pred -hcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCC
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++||++++++++++.++|++++++|+++++||.... ..|+|++||||.+++++|++++||+||||++|++|++
T Consensus 325 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 400 (495)
T 3b4w_A 325 AQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDT 400 (495)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCC
Confidence 9999999999999999999999999999999997643 2589999999999999999999999999999999986
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-89 Score=693.64 Aligned_cols=390 Identities=34% Similarity=0.606 Sum_probs=371.1
Q ss_pred CccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 015020 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (414)
Q Consensus 18 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (414)
.+...++||||+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|+
T Consensus 22 ~~~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 98 (498)
T 4f3x_A 22 SMMDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADAIE 98 (498)
T ss_dssp -CCCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHH
T ss_pred hccccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHH
Confidence 4456789999999987666 999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhh-hhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHh
Q 015020 98 EHAEVLAVLEALDAGKLHSWA-KMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTM 175 (414)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a-~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (414)
+++++|++++++|+|||+.++ + .|+..+++.+++++++++++.+...+. ..+...++.++|+|||++|+|||||+..
T Consensus 99 ~~~~ela~~~~~e~Gk~~~ea~~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 177 (498)
T 4f3x_A 99 KEADEFAALEALNCGKPINAVKN-DELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMM 177 (498)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHH-THHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HhHHHHHHHHHHHhCCCHHHHhH-HHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHH
Confidence 999999999999999999999 6 499999999999999988766554432 2456788999999999999999999999
Q ss_pred hHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHH
Q 015020 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (414)
Q Consensus 176 ~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (414)
.++++++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|+
T Consensus 178 ~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~ 256 (498)
T 4f3x_A 178 MAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVL 256 (498)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 9999999999999999999999999999999999999 999999999998888999999999999999999999999999
Q ss_pred HHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCC
Q 015020 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (414)
Q Consensus 256 ~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 335 (414)
+.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 257 ~~aa-~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p 335 (498)
T 4f3x_A 257 AAAA-KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLD 335 (498)
T ss_dssp HHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCS
T ss_pred HHHH-hhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCC
Confidence 9999 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHcCC-EEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga-~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
.++++++||++++.+++++.++|++++++|+ ++++||...+..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 336 ~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 414 (498)
T 4f3x_A 336 DDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTG 414 (498)
T ss_dssp SGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECT
T ss_pred ccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCC
Confidence 9999999999999999999999999999999 99999986555799999999999999999999999999999999986
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-88 Score=690.06 Aligned_cols=392 Identities=37% Similarity=0.678 Sum_probs=370.7
Q ss_pred CCccccceeEcCeEeeCCCCCe-EEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHH
Q 015020 17 PEIKFTKLFINGEFVDSVSGKT-FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL 95 (414)
Q Consensus 17 ~~~~~~~~~i~g~~~~~~~~~~-~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~ 95 (414)
......++||||+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.
T Consensus 15 ~~~~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~ 92 (503)
T 1a4s_A 15 VVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARI 92 (503)
T ss_dssp CCCCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHH
T ss_pred ccccccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHH
Confidence 3345577999999998766778 99999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHh
Q 015020 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTM 175 (414)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (414)
|++++++|++++++|+|||+.+++. |+..+++.++++++++++..+...+...+...++.++|+|||++|+|||||+..
T Consensus 93 l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 171 (503)
T 1a4s_A 93 IRERRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMI 171 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHH
Confidence 9999999999999999999999986 999999999999999887765544433344678999999999999999999999
Q ss_pred hHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHH
Q 015020 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (414)
Q Consensus 176 ~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (414)
.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+ ++++.|+.||+++.|+||||+.+|+.|+
T Consensus 172 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~ 250 (503)
T 1a4s_A 172 AAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVM 250 (503)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999977 8999999999999999999999999999
Q ss_pred HHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCC
Q 015020 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (414)
Q Consensus 256 ~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 335 (414)
+.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 251 ~~aa-~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 329 (503)
T 1a4s_A 251 EMSA-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDP 329 (503)
T ss_dssp HHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhh-hcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCC
Confidence 9999 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc--C----CCCCeEeeEEEeeCCCCCcccccccccceeeEE
Q 015020 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI--G----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM 409 (414)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~--~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~ 409 (414)
.++++++||++++.+++++.++|++++++|+++++||... . ..|+|++||||.+++++|++++||+||||++|+
T Consensus 330 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 409 (503)
T 1a4s_A 330 LLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVL 409 (503)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred cccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEE
Confidence 9999999999999999999999999999999999999764 1 358999999999999999999999999999999
Q ss_pred EEec
Q 015020 410 KFKI 413 (414)
Q Consensus 410 ~~~~ 413 (414)
+|++
T Consensus 410 ~~~~ 413 (503)
T 1a4s_A 410 PFDT 413 (503)
T ss_dssp EECC
T ss_pred ecCC
Confidence 9986
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-89 Score=692.31 Aligned_cols=393 Identities=35% Similarity=0.626 Sum_probs=371.8
Q ss_pred CCccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHH
Q 015020 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLI 96 (414)
Q Consensus 17 ~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l 96 (414)
.++...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|
T Consensus 8 ~~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l 85 (497)
T 3k2w_A 8 LHFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANKI 85 (497)
T ss_dssp CCCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHH
T ss_pred ccccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHH
Confidence 345667899999999887788999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHh
Q 015020 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTM 175 (414)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (414)
++++++|++++++|+|||+.+++. |+..+++.+++++.++++..+...+. ..+...++.++|+|||++|+|||||+..
T Consensus 86 ~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 164 (497)
T 3k2w_A 86 RENKHILAPMLVAEQGKLLSVAEM-EVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLAL 164 (497)
T ss_dssp HTTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHH
Confidence 999999999999999999999986 99999999999999988776655443 2456788999999999999999999999
Q ss_pred hHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHH
Q 015020 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (414)
Q Consensus 176 ~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (414)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||++|.|+||||+.+|+.|+
T Consensus 165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~ 244 (497)
T 3k2w_A 165 AGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIY 244 (497)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998778999999999999999999999999999
Q ss_pred HHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCC
Q 015020 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (414)
Q Consensus 256 ~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 335 (414)
+.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 245 ~~aa-~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p 323 (497)
T 3k2w_A 245 KTSA-EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDP 323 (497)
T ss_dssp HHHT-TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhh-hcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 9998 889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcc--cCC--CCCeEeeEEEeeCCCCCcccccccccceeeEEEE
Q 015020 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP--IGK--KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411 (414)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~--~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~ 411 (414)
.++++++||++++++++++.++|++++++|+++++||.. .+. .|+|++|||+.+++++|++++||+||||++|++|
T Consensus 324 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 403 (497)
T 3k2w_A 324 MDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKV 403 (497)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEe
Confidence 999999999999999999999999999999999999973 222 6899999999999999999999999999999999
Q ss_pred ec
Q 015020 412 KI 413 (414)
Q Consensus 412 ~~ 413 (414)
++
T Consensus 404 ~~ 405 (497)
T 3k2w_A 404 SS 405 (497)
T ss_dssp SC
T ss_pred CC
Confidence 86
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-88 Score=690.39 Aligned_cols=392 Identities=44% Similarity=0.748 Sum_probs=370.6
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccC---CCCCCCHHHHHHHHHHHHHHH
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG---PWPRFSGAERRGIMLKFADLI 96 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~---~w~~~~~~~R~~~L~~~a~~l 96 (414)
+..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||.++ .|+.++..+|.++|+++++.|
T Consensus 6 ~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l 85 (503)
T 3iwj_A 6 PTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKV 85 (503)
T ss_dssp CCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHH
T ss_pred CCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHH
Confidence 45679999999988778899999999999999999999999999999999999732 699999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCcee-ec---cCCccceeeecCCceEEEEcCCchh
Q 015020 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KM---SRALQGYTLREPIGVVGHIIPWNFP 172 (414)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~P~Gvv~~i~p~n~P 172 (414)
++++++|++++++|+|||+.+++. |+..+++.+++++.+++++.+... +. ..+...++.++|+|||++|+|||||
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 164 (503)
T 3iwj_A 86 TEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYP 164 (503)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchH
Confidence 999999999999999999999986 999999999999999877654321 11 1345688999999999999999999
Q ss_pred HHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHH
Q 015020 173 TTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252 (414)
Q Consensus 173 ~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~ 252 (414)
+...++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+++.|+||||+.+|+
T Consensus 165 ~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~ 244 (503)
T 3iwj_A 165 MLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGS 244 (503)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHH
Confidence 99999999999999999999999999999999999999999999999999998878999999999999999999999999
Q ss_pred HHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhcccc
Q 015020 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (414)
Q Consensus 253 ~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (414)
.|++.++ .++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 245 ~i~~~aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (503)
T 3iwj_A 245 KIMTAAA-QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKI 323 (503)
T ss_dssp HHHHHHG-GGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred HHHHHHh-cCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccC
Confidence 9999998 789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCCeEeeEEEeeCCCCCcccccccccceeeEEE
Q 015020 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMK 410 (414)
Q Consensus 333 g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~ 410 (414)
|+|+++++++|||+++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 324 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 403 (503)
T 3iwj_A 324 SDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKT 403 (503)
T ss_dssp SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEE
Confidence 99999999999999999999999999999999999999998643 4799999999999999999999999999999999
Q ss_pred Eec
Q 015020 411 FKI 413 (414)
Q Consensus 411 ~~~ 413 (414)
|++
T Consensus 404 ~~~ 406 (503)
T 3iwj_A 404 FST 406 (503)
T ss_dssp ESS
T ss_pred eCC
Confidence 985
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-88 Score=687.34 Aligned_cols=391 Identities=36% Similarity=0.597 Sum_probs=367.0
Q ss_pred CccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 015020 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (414)
Q Consensus 18 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (414)
++...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+
T Consensus 22 m~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 99 (497)
T 3i44_A 22 MLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLGFVEKILEIYE 99 (497)
T ss_dssp CEEECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHH
T ss_pred cccccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHH
Confidence 33567899999999887788999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceee-ecCCceEEEEcCCchhHHhh
Q 015020 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTL-REPIGVVGHIIPWNFPTTMF 176 (414)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i~p~n~P~~~~ 176 (414)
+++++|++++++|+|||+.+++..|+..+++.++++++........... ..+...++. ++|+|||++|+|||||+...
T Consensus 100 ~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 178 (497)
T 3i44_A 100 KRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL-IEGNEQAILHYDAIGVVGLITPWNWPMNQV 178 (497)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES-STTCSSCEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cCCceeEEEeecCceEEEEECCCcchHHHH
Confidence 9999999999999999999998349999999999999877654322211 124457788 99999999999999999999
Q ss_pred HHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHH
Q 015020 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (414)
Q Consensus 177 ~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (414)
++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+||.|+||||+.+|+.|++
T Consensus 179 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~ 258 (497)
T 3i44_A 179 TLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISK 258 (497)
T ss_dssp HHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCC
Q 015020 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (414)
Q Consensus 257 ~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~ 336 (414)
.++ +++||+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.
T Consensus 259 ~aa-~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~ 336 (497)
T 3i44_A 259 NAS-NTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGH 336 (497)
T ss_dssp HHH-TTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTT
T ss_pred HHh-hcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCC
Confidence 999 89999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCc-ccC--CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~-~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++++||++++.+++++.++|++++++|+++++||. ... ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 337 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 416 (497)
T 3i44_A 337 QTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNT 416 (497)
T ss_dssp SCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCC
Confidence 9999999999999999999999999999999999994 322 2699999999999999999999999999999999986
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-88 Score=686.57 Aligned_cols=392 Identities=55% Similarity=0.894 Sum_probs=368.8
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccC-CCCCCCHHHHHHHHHHHHHHHHHhH
Q 015020 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLIEEHA 100 (414)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (414)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+++ .|+.++..+|.++|+++++.|++|+
T Consensus 20 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (500)
T 1o04_A 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDR 99 (500)
T ss_dssp CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 468999999987667899999999999999999999999999999999999621 4999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhH
Q 015020 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (414)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 180 (414)
++|++++++|+|||+.++...|+..+++.++++++++++..+...+...+...++.++|+|||++|+|||||+...++++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 179 (500)
T 1o04_A 100 TYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 179 (500)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHH
Confidence 99999999999999998754599999999999999888776554443334557899999999999999999999999999
Q ss_pred hhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHh
Q 015020 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (414)
Q Consensus 181 ~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~ 260 (414)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||.|+||||+.+|+.|++.++.
T Consensus 180 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~ 259 (500)
T 1o04_A 180 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259 (500)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999777899999999999999999999999999998875
Q ss_pred CCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCC
Q 015020 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (414)
Q Consensus 261 ~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~ 340 (414)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.++++
T Consensus 260 ~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 339 (500)
T 1o04_A 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT 339 (500)
T ss_dssp TTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred hcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++|||+++.+++++.++|++++++|+++++||......|+|++||||.+++++|++++||+||||++|++|++
T Consensus 340 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 412 (500)
T 1o04_A 340 EQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKT 412 (500)
T ss_dssp SBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred ccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCC
Confidence 9999999999999999999999999999999976434699999999999999999999999999999999986
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-88 Score=690.03 Aligned_cols=387 Identities=39% Similarity=0.681 Sum_probs=369.0
Q ss_pred CccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 015020 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (414)
Q Consensus 18 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (414)
++...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|+
T Consensus 11 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 88 (517)
T 3r31_A 11 AQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIMR 88 (517)
T ss_dssp TCCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred cccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHH
Confidence 34567899999999887888999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhh----hcCceeeccCCccceeeecCCceEEEEcCCchhH
Q 015020 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK----IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPT 173 (414)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~ 173 (414)
+++++|++++++|+|||+.++ |+..+++.+++++.++++ ..+...+...+. .++.++|+|||++|+|||||+
T Consensus 89 ~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~ 164 (517)
T 3r31_A 89 ERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQ 164 (517)
T ss_dssp HTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHH
T ss_pred HHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchH
Confidence 999999999999999999998 899999999999999887 666655543445 899999999999999999999
Q ss_pred HhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHH
Q 015020 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (414)
Q Consensus 174 ~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~ 253 (414)
...++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.++++.|++||+||.|+||||+.+|+.
T Consensus 165 ~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 243 (517)
T 3r31_A 165 QIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRK 243 (517)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 7789999999999999999999999999
Q ss_pred HHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccC
Q 015020 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (414)
Q Consensus 254 i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g 333 (414)
|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 244 i~~~aa-~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 322 (517)
T 3r31_A 244 VAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILG 322 (517)
T ss_dssp HHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred HHHHhh-cCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCC
Confidence 999998 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcc-cC---CCCCeEeeEEEeeCCCCCcccccccccceeeEE
Q 015020 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP-IG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM 409 (414)
Q Consensus 334 ~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~-~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~ 409 (414)
+|.++++++||++++.+++++.++|++++++|+++++|| . .+ ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 323 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 401 (517)
T 3r31_A 323 DPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVL 401 (517)
T ss_dssp CTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEE
T ss_pred CCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEE
Confidence 999999999999999999999999999999999999999 4 21 369999999999999999999999999999999
Q ss_pred EEec
Q 015020 410 KFKI 413 (414)
Q Consensus 410 ~~~~ 413 (414)
+|++
T Consensus 402 ~~~~ 405 (517)
T 3r31_A 402 DFDD 405 (517)
T ss_dssp EECC
T ss_pred EeCC
Confidence 9986
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-88 Score=683.24 Aligned_cols=390 Identities=37% Similarity=0.665 Sum_probs=371.4
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 8 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 85 (481)
T 3jz4_A 8 FRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMMEH 85 (481)
T ss_dssp CCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHH
Confidence 345689999999887888999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHhhHH
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (414)
+++|++++++|+|||..+++. |+..+++.+++++....+..+...+. ..+...++.++|+|||++|+|||||+...++
T Consensus 86 ~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 164 (481)
T 3jz4_A 86 QDDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITR 164 (481)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHH
Confidence 999999999999999999986 99999999999999887665554442 2456678999999999999999999999999
Q ss_pred hHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHH
Q 015020 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (414)
Q Consensus 179 ~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (414)
++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|++.+
T Consensus 165 ~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~a 244 (481)
T 3jz4_A 165 KAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQC 244 (481)
T ss_dssp HHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred HhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCC
Q 015020 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (414)
Q Consensus 259 ~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~ 338 (414)
+ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++
T Consensus 245 a-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 323 (481)
T 3jz4_A 245 A-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDN 323 (481)
T ss_dssp T-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTST
T ss_pred h-hcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccC
Confidence 8 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 324 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 398 (481)
T 3jz4_A 324 GVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKD 398 (481)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECC
T ss_pred cCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECC
Confidence 999999999999999999999999999999999986445689999999999999999999999999999999986
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-88 Score=689.70 Aligned_cols=390 Identities=32% Similarity=0.461 Sum_probs=369.1
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015020 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (414)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (414)
|...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|++
T Consensus 24 m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 101 (521)
T 4e4g_A 24 MYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVFMKFVQLLND 101 (521)
T ss_dssp CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred hhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 4667899999999887788999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHhhH
Q 015020 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (414)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (414)
++++|++++++|+|||+.+++. |+..+++.+++++.+.+...+...+. ..+...++.++|+|||++|+|||||+...+
T Consensus 102 ~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 180 (521)
T 4e4g_A 102 NMNELAEMLSREHGKTIDDAKG-DIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPM 180 (521)
T ss_dssp HHHHHHHHHHHHHCSCHHHHHH-HHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHH
Confidence 9999999999999999999986 99999999999998777665544332 245568899999999999999999999999
Q ss_pred HhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHH
Q 015020 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (414)
Q Consensus 178 ~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (414)
+++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++|+ .+.+..|+.||+||.|+||||+.+|+.|++.
T Consensus 181 ~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~ 259 (521)
T 4e4g_A 181 WMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYGT 259 (521)
T ss_dssp HHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999995 4677999999999999999999999999999
Q ss_pred HHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecc-hHHHHHHHHHHHHhccccCCCC
Q 015020 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGDPF 336 (414)
Q Consensus 258 ~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~ 336 (414)
++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ ++|+|+++|+++++++++|+|.
T Consensus 260 aa-~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~ 338 (521)
T 4e4g_A 260 AA-MNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYT 338 (521)
T ss_dssp HH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTT
T ss_pred Hh-hcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCC
Confidence 98 789999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc----CCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEe
Q 015020 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI----GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (414)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (414)
++++++||++++.+++++.++|++++++||++++||... ...|+|++||||.+++++|++++||+||||++|++|+
T Consensus 339 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 418 (521)
T 4e4g_A 339 DEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRAR 418 (521)
T ss_dssp CTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBS
T ss_pred CccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeC
Confidence 999999999999999999999999999999999999752 2469999999999999999999999999999999997
Q ss_pred c
Q 015020 413 I 413 (414)
Q Consensus 413 ~ 413 (414)
+
T Consensus 419 ~ 419 (521)
T 4e4g_A 419 N 419 (521)
T ss_dssp S
T ss_pred C
Confidence 5
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-88 Score=682.42 Aligned_cols=390 Identities=33% Similarity=0.603 Sum_probs=369.1
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|+++
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (479)
T 2imp_A 5 VQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGIRER 82 (479)
T ss_dssp EECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHH
Confidence 346789999999876678999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecCCceEEEEcCCchhHHhhHH
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (414)
+++|++++++|+|||+.+++. |+..+++.++++++++++..+...+.. .+...++.++|+|||++|+|||||+...++
T Consensus 83 ~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 161 (479)
T 2imp_A 83 ASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIAR 161 (479)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHH
Confidence 999999999999999999986 999999999999988877665543322 344678999999999999999999999999
Q ss_pred hHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHH
Q 015020 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (414)
Q Consensus 179 ~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (414)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++.++++.|++||+++.|+||||+.+|+.|++.+
T Consensus 162 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~a 241 (479)
T 2imp_A 162 KMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATA 241 (479)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997777899999999999999999999999999999
Q ss_pred HhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCC-
Q 015020 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD- 337 (414)
Q Consensus 259 ~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~- 337 (414)
+ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 242 a-~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 320 (479)
T 2imp_A 242 A-KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAER 320 (479)
T ss_dssp H-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTC
T ss_pred h-ccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCcccc
Confidence 9 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++++|||+++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 321 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~ 396 (479)
T 2imp_A 321 NDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDT 396 (479)
T ss_dssp SSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESS
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCC
Confidence 9999999999999999999999999999999999976333689999999999999999999999999999999986
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-88 Score=683.30 Aligned_cols=395 Identities=36% Similarity=0.613 Sum_probs=367.3
Q ss_pred ccCCCCccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHH
Q 015020 13 LFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKF 92 (414)
Q Consensus 13 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~ 92 (414)
..|...+...++||||+|+.+.+ ++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++
T Consensus 15 ~~~~~~~~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~ 91 (495)
T 1wnd_A 15 LYKKAGLMQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKL 91 (495)
T ss_dssp -------CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHH
T ss_pred ccccccccccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHH
Confidence 34444555578999999997655 7899999999999999999999999999999999999 89999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecCCceEEEEcCCch
Q 015020 93 ADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNF 171 (414)
Q Consensus 93 a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~ 171 (414)
++.|++++++|++++++|+|||+.+++..|+..+++.++++++++++..++..+.. .+...++.++|+|||++|+||||
T Consensus 92 a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~ 171 (495)
T 1wnd_A 92 ADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNY 171 (495)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcc
Confidence 99999999999999999999999999754899999999999998877665544422 34457889999999999999999
Q ss_pred hHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHH
Q 015020 172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG 251 (414)
Q Consensus 172 P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g 251 (414)
|+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+|+|++.+++..|++||++|.|+||||+.+|
T Consensus 172 P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G 250 (495)
T 1wnd_A 172 PLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATG 250 (495)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHH
T ss_pred hHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHH
Confidence 99999999999999999999999999999999999999999 99999999999777889999999999999999999999
Q ss_pred HHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccc
Q 015020 252 RQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (414)
Q Consensus 252 ~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~ 331 (414)
+.|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 251 ~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 329 (495)
T 1wnd_A 251 EHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLK 329 (495)
T ss_dssp HHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHH-hcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhcc
Confidence 99999998 78999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcC-CEEEeCCc-ccCCCCCeEeeEEEeeCCCCCcccccccccceeeEE
Q 015020 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGK-PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM 409 (414)
Q Consensus 332 ~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~G-a~v~~gg~-~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~ 409 (414)
+|+|.++++++|||+++.+++++.++|++++++| +++++||. .. ..|+|++||||.+++++|++++||+||||++|+
T Consensus 330 ~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 408 (495)
T 1wnd_A 330 SGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVT 408 (495)
T ss_dssp BCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEE
Confidence 9999999999999999999999999999999999 99999997 53 369999999999999999999999999999999
Q ss_pred EEec
Q 015020 410 KFKI 413 (414)
Q Consensus 410 ~~~~ 413 (414)
+|++
T Consensus 409 ~~~~ 412 (495)
T 1wnd_A 409 PFDN 412 (495)
T ss_dssp EECC
T ss_pred EeCC
Confidence 9986
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-87 Score=687.40 Aligned_cols=387 Identities=33% Similarity=0.569 Sum_probs=368.3
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (414)
...++||||+|+. ++++++++||+| |+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 36 ~~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 111 (538)
T 3qan_A 36 KEYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRR 111 (538)
T ss_dssp EEECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHH
Confidence 3568999999997 668999999999 999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHH-hhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhH
Q 015020 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA-ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (414)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (414)
++++|++++++|+|||+.+++. |+..+++.+++++.+ .+...+...+...+...++.++|+|||++|+|||||+.+.+
T Consensus 112 ~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 190 (538)
T 3qan_A 112 RKHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMV 190 (538)
T ss_dssp THHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHH
Confidence 9999999999999999999997 999999999999998 55555555543345678899999999999999999999999
Q ss_pred HhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHH
Q 015020 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (414)
Q Consensus 178 ~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (414)
+++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+||.|+||||+.+|+.|++.
T Consensus 191 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~ 270 (538)
T 3qan_A 191 GTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYER 270 (538)
T ss_dssp HHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877899999999999999999999999999999
Q ss_pred HHhCC------CcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccc
Q 015020 258 AATSN------LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (414)
Q Consensus 258 ~~~~~------~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~ 331 (414)
++ .+ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 271 aa-~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 349 (538)
T 3qan_A 271 AA-VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLT 349 (538)
T ss_dssp HT-SCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCC
T ss_pred hh-hccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhcc
Confidence 98 67 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEE
Q 015020 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411 (414)
Q Consensus 332 ~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~ 411 (414)
+|+|.++++++||++++.+++++.++|++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|
T Consensus 350 vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~ 428 (538)
T 3qan_A 350 VGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKA 428 (538)
T ss_dssp BSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEe
Confidence 9999999999999999999999999999999999 999999875447999999999999999999999999999999999
Q ss_pred ec
Q 015020 412 KI 413 (414)
Q Consensus 412 ~~ 413 (414)
++
T Consensus 429 ~~ 430 (538)
T 3qan_A 429 ND 430 (538)
T ss_dssp SS
T ss_pred CC
Confidence 85
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-88 Score=686.01 Aligned_cols=388 Identities=43% Similarity=0.717 Sum_probs=368.5
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 015020 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (414)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (414)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++
T Consensus 26 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 103 (515)
T 2d4e_A 26 PALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHA 103 (515)
T ss_dssp CBCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 35689999999876778999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHhhHHh
Q 015020 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (414)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (414)
++|++++++|+|||+.+++. |+..+++.++++++++++..+...+. ..+...++.++|+|||++|+|||||+...+++
T Consensus 104 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 182 (515)
T 2d4e_A 104 DELAVMECLDAGQVLRIVRA-QVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWR 182 (515)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhh
Confidence 99999999999999999985 99999999999999888776655443 23456788999999999999999999999999
Q ss_pred HhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHH
Q 015020 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (414)
Q Consensus 180 l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (414)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||++|.|+||||+.+|+.|++.++
T Consensus 183 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa 262 (515)
T 2d4e_A 183 IAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAA 262 (515)
T ss_dssp HHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred hhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999977788999999999999999999999999999999
Q ss_pred hCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCC
Q 015020 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (414)
Q Consensus 260 ~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 339 (414)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++
T Consensus 263 -~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 341 (515)
T 2d4e_A 263 -DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPE 341 (515)
T ss_dssp -GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTT
T ss_pred -hcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCccccc
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--------CCCCeEeeEEEeeCCCCCcccccccccceeeEEEE
Q 015020 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--------KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411 (414)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--------~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~ 411 (414)
+++||++++++++++.++|++++++|+++++||.... ..|+|++||||.+ +++|++++||+||||++|++|
T Consensus 342 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~ 420 (515)
T 2d4e_A 342 TEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPF 420 (515)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEE
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEee
Confidence 9999999999999999999999999999999997642 2599999999999 999999999999999999999
Q ss_pred ec
Q 015020 412 KI 413 (414)
Q Consensus 412 ~~ 413 (414)
++
T Consensus 421 ~~ 422 (515)
T 2d4e_A 421 KD 422 (515)
T ss_dssp SS
T ss_pred CC
Confidence 86
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-87 Score=682.06 Aligned_cols=384 Identities=33% Similarity=0.534 Sum_probs=365.9
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 87 (505)
T 3prl_A 10 FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEER 87 (505)
T ss_dssp EECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 345789999999887788999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc--C----CccceeeecCCceEEEEcCCchhH
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--R----ALQGYTLREPIGVVGHIIPWNFPT 173 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~P~Gvv~~i~p~n~P~ 173 (414)
+++|++++++|+|||..+++. |+..+++.++++++++++..+...+.. . +...++.++|+|||++|+|||||+
T Consensus 88 ~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~ 166 (505)
T 3prl_A 88 KEIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPV 166 (505)
T ss_dssp HHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTT
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHH
Confidence 999999999999999999997 999999999999999887665544422 2 345788999999999999999999
Q ss_pred HhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHH
Q 015020 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (414)
Q Consensus 174 ~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~ 253 (414)
...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||++|.|+||||+.+|+.
T Consensus 167 ~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 246 (505)
T 3prl_A 167 NLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGER 246 (505)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987889999999999999999999999999
Q ss_pred HHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccC
Q 015020 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (414)
Q Consensus 254 i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g 333 (414)
|++.++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 247 i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 323 (505)
T 3prl_A 247 ISEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVG 323 (505)
T ss_dssp HHHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBS
T ss_pred HHHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccC
Confidence 999876 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 334 ~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
||. +++++||++++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 324 ~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~ 399 (505)
T 3prl_A 324 SPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKD 399 (505)
T ss_dssp CTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCC
Confidence 999 9999999999999999999999999999999999974 589999999999999999999999999999999986
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-86 Score=676.27 Aligned_cols=399 Identities=29% Similarity=0.474 Sum_probs=372.2
Q ss_pred cccccccCCCCcc-ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHH
Q 015020 8 GSCKSLFKMPEIK-FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERR 86 (414)
Q Consensus 8 ~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~ 86 (414)
.....||+..+++ ..+.||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~ 84 (500)
T 2j6l_A 9 QPQYAWLKELGLREENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRG 84 (500)
T ss_dssp SGGGGGGGGGTCCSEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHH
T ss_pred cchhHHHHhcCCCCCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHH
Confidence 4555678877774 488999999994 567899999999999999999999999999999999999 89999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecCCceEEE
Q 015020 87 GIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGH 165 (414)
Q Consensus 87 ~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~ 165 (414)
++|+++++.|++++++|++++++|+|||..+++. |+..+++.+++++.+++++.+...+.. .+...++.++|+|||++
T Consensus 85 ~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~ 163 (500)
T 2j6l_A 85 EIVRQIGDALREKIQVLGSLVSLEMGKILVEGVG-EVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGI 163 (500)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEE
Confidence 9999999999999999999999999999999975 999999999999998877665544322 23446788999999999
Q ss_pred EcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHhhhCCCcCE
Q 015020 166 IIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDGVLNVVPGFGPTAGAAIASHMDIDK 241 (414)
Q Consensus 166 i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~----~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~ 241 (414)
|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++. ++|+|+|++|+|+| +.++++.|+.||++|.
T Consensus 164 I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~ 242 (500)
T 2j6l_A 164 ITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNL 242 (500)
T ss_dssp ECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSE
T ss_pred ECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCE
Confidence 999999999999999999999999999999999999999988876 46999999999999 7789999999999999
Q ss_pred EEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHH
Q 015020 242 VSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321 (414)
Q Consensus 242 v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~ 321 (414)
|+||||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|++
T Consensus 243 I~FTGS~~~g~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~ 321 (500)
T 2j6l_A 243 LSFTGSTQVGKQVGLMVQ-ERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVN 321 (500)
T ss_dssp EEEESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHH
T ss_pred EEEECCHHHHHHHHHHhc-cCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHH
Confidence 999999999999999998 7899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCccccccc
Q 015020 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEI 401 (414)
Q Consensus 322 ~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~ 401 (414)
+|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+
T Consensus 322 ~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEi 401 (500)
T 2j6l_A 322 RLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTET 401 (500)
T ss_dssp HHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCC
T ss_pred HHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcc
Confidence 99999999999999999999999999999999999999999999999999986434699999999999999999999999
Q ss_pred ccceeeEEEEec
Q 015020 402 FGPVMALMKFKI 413 (414)
Q Consensus 402 fgPv~~v~~~~~ 413 (414)
||||++|++|++
T Consensus 402 FGPVl~v~~~~~ 413 (500)
T 2j6l_A 402 FAPILYVFKFQN 413 (500)
T ss_dssp SSSEEEEEEECC
T ss_pred cCceEEEEeeCC
Confidence 999999999986
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-87 Score=675.27 Aligned_cols=385 Identities=37% Similarity=0.645 Sum_probs=366.3
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 015020 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (414)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (414)
.++||||+|+.+. ++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++|++
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKD 88 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999754 7899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHhhHHhH
Q 015020 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (414)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 180 (414)
+|++++++|+|||..+++. |+..+++.++++++++++..+...+. ..+...++.++|+|||++|+|||||+...++++
T Consensus 89 ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (487)
T 2w8n_A 89 DLARIITAESGKPLKEAHG-EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV 167 (487)
T ss_dssp HHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence 9999999999999999986 99999999999999988766655443 234567899999999999999999999999999
Q ss_pred hhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEe---CCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHH
Q 015020 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP---GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (414)
Q Consensus 181 ~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~---g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (414)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+ |++.++++.|++||++|.|+||||+.+|+.|++.
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 247 (487)
T 2w8n_A 168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247 (487)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 8667789999999999999999999999999999
Q ss_pred HHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhc-cccCCCC
Q 015020 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPF 336 (414)
Q Consensus 258 ~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~p~ 336 (414)
++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +++|+|.
T Consensus 248 aa-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~ 326 (487)
T 2w8n_A 248 AA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGF 326 (487)
T ss_dssp HH-TTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred Hh-ccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcc
Confidence 99 899999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCC-eEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY-YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~-~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++++|||+++.+++++.++|++++++|+++++||... ..|+ |++|||+.+++++|++++||+||||++|++|++
T Consensus 327 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 403 (487)
T 2w8n_A 327 EEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDT 403 (487)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESC
T ss_pred cccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEEeCC
Confidence 999999999999999999999999999999999999864 3589 999999999999999999999999999999986
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-86 Score=675.69 Aligned_cols=387 Identities=36% Similarity=0.587 Sum_probs=369.6
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015020 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (414)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (414)
++..++||||+|+.+.++++++++||+||+++++++.++.+++++++++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 87 (508)
T 3r64_A 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELLEE 87 (508)
T ss_dssp BCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred ccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHH
Confidence 4566799999999887788999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec--cCCccceeeecCCceEEEEcCCchhHHhh
Q 015020 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTMF 176 (414)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 176 (414)
++++|++++++|+|||..+++. |+..+++.+++++.+.++..+ ..+. ..+...++.++|+|||++|+|||||+...
T Consensus 88 ~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 165 (508)
T 3r64_A 88 HREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLS 165 (508)
T ss_dssp THHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred hHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHH
Confidence 9999999999999999999997 999999999999988876655 4442 23467889999999999999999999999
Q ss_pred HHhHhhHhhcCCEEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHH
Q 015020 177 FMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (414)
Q Consensus 177 ~~~l~~ALaaGN~vvlkps~~~~~~~-~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (414)
++++++||++||+||+|||+.+|+++ .+|.+++.++|+|+|++|+++|++.+.++.|++||++|.|+||||+.+|+.|+
T Consensus 166 ~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~ 245 (508)
T 3r64_A 166 IRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVG 245 (508)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHH
Confidence 99999999999999999999999999 99999999999999999999997778999999999999999999999999999
Q ss_pred HHHHhC--CCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccC
Q 015020 256 QAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (414)
Q Consensus 256 ~~~~~~--~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g 333 (414)
+.++ + +++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 246 ~~aa-~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 324 (508)
T 3r64_A 246 ELAI-NGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTG 324 (508)
T ss_dssp HHHH-SSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred HHhh-cccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCC
Confidence 9998 7 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 334 ~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+|.++++++|||+++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 325 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 401 (508)
T 3r64_A 325 DPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADD 401 (508)
T ss_dssp CTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESS
T ss_pred CCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeCC
Confidence 99999999999999999999999999999999999999975 589999999999999999999999999999999985
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-86 Score=674.59 Aligned_cols=387 Identities=28% Similarity=0.487 Sum_probs=366.3
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
+..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (485)
T 4dng_A 5 TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHEN 82 (485)
T ss_dssp GCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHH
Confidence 456799999999877788999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec--cCCccceeeecCCceEEEEcCCchhHHhhH
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (414)
+++|++++++|+|||+.+++. |+..+++.+++++.+.+...+...+. ..+...++.++|+|||++|+|||||+...+
T Consensus 83 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 161 (485)
T 4dng_A 83 RDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSM 161 (485)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHH
Confidence 999999999999999999997 99999999999999988766655442 234678899999999999999999999999
Q ss_pred HhHhhHhhcCCEEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHH
Q 015020 178 MKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (414)
Q Consensus 178 ~~l~~ALaaGN~vvlkps~~~~~~~-~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (414)
+++++||++||+||+|||+.+|+++ .+|.+++.++|+|+|++|+++|++.++++.|++||+++.|+||||+.+|+.|++
T Consensus 162 ~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~ 241 (485)
T 4dng_A 162 RSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGE 241 (485)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHH
Confidence 9999999999999999999999999 999999999999999999999987779999999999999999999999999999
Q ss_pred HHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCC
Q 015020 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (414)
Q Consensus 257 ~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~ 336 (414)
.++ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus 242 ~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~ 320 (485)
T 4dng_A 242 IAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQT 320 (485)
T ss_dssp HHH-HHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred HHh-hhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence 998 7899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++++||++++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 321 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~ 394 (485)
T 4dng_A 321 DPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGS 394 (485)
T ss_dssp STTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESS
T ss_pred cCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCC
Confidence 99999999999999999999999999999999999975 689999999999999999999999999999999985
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-86 Score=670.66 Aligned_cols=376 Identities=31% Similarity=0.548 Sum_probs=353.1
Q ss_pred eeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 015020 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL 103 (414)
Q Consensus 24 ~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 103 (414)
+||||+|+.+ ++ ++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++++++|
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 76 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL 76 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999974 45 99999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhH
Q 015020 104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183 (414)
Q Consensus 104 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~A 183 (414)
++++++|+|||..+++. |+..+++.+++++.+++++.+...+.. +...++.++|+|||++|+|||||+...++++++|
T Consensus 77 a~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 154 (486)
T 3pqa_A 77 AKILAIDAGKPIKQARV-EVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA 154 (486)
T ss_dssp HHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence 99999999999999986 999999999999999887765544432 5678899999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHH
Q 015020 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (414)
Q Consensus 184 LaaGN~vvlkps~~~~~~~~~l~~~l~~a----glP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (414)
|++||+||+|||+.+|+++.+|++++.++ |+|+|++|+++|++.++++.|+.||++|.|+||||+.+|+.|++.++
T Consensus 155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa 234 (486)
T 3pqa_A 155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234 (486)
T ss_dssp HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence 99999999999999999999999999999 99999999999988788999999999999999999999999998876
Q ss_pred hCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCC
Q 015020 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (414)
Q Consensus 260 ~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 339 (414)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|++++
T Consensus 235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 311 (486)
T 3pqa_A 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK 311 (486)
T ss_dssp ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++|||++..+++++.++|++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|++
T Consensus 312 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~ 381 (486)
T 3pqa_A 312 TDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE 381 (486)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH
Confidence 99999999999999999999999999999999975 5899999999 9999999999999999999999975
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-86 Score=670.20 Aligned_cols=388 Identities=34% Similarity=0.555 Sum_probs=365.0
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|+++
T Consensus 4 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 81 (486)
T 1t90_A 4 RKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQH 81 (486)
T ss_dssp CBCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHTT
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHH
Confidence 346789999999876778999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceee-ccCCccceeeecCCceEEEEcCCchhHHhhHH
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (414)
+++|++++++|+|||+.+++. |+..+++.+++++.+.+...++..+ ...+...++.++|+|||++|+|||||+...++
T Consensus 82 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 160 (486)
T 1t90_A 82 KEELAHLITIENGKNTKEALG-EVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCW 160 (486)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHH
Confidence 999999999999999999986 9999999999998776665554433 22345678899999999999999999999999
Q ss_pred hHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHH
Q 015020 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (414)
Q Consensus 179 ~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (414)
++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++| +.+.+..|++||+++.|+||||+.+|+.|++.+
T Consensus 161 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~a 239 (486)
T 1t90_A 161 MFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKG 239 (486)
T ss_dssp HHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 557899999999999999999999999999999
Q ss_pred HhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCc-eEeecchHHHHHHHHHHHHhccccCCCCC
Q 015020 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR-VYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (414)
Q Consensus 259 ~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~-v~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 337 (414)
+ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ +|+|+++|+++++++++|+|.+
T Consensus 240 a-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~ 317 (486)
T 1t90_A 240 S-ENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLD 317 (486)
T ss_dssp H-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTS
T ss_pred h-ccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCc
Confidence 8 789999999999999999999999999999999999999999999999 999999 9999999999999999999999
Q ss_pred CCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-CCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI-GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++++||++++.+++++.++|++++++|+++++||... ...|+|++||||.+++++|++++||+||||++|++|++
T Consensus 318 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~ 394 (486)
T 1t90_A 318 DGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKN 394 (486)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred cCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCC
Confidence 99999999999999999999999999999999999743 13589999999999999999999999999999999986
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-86 Score=668.25 Aligned_cols=382 Identities=31% Similarity=0.500 Sum_probs=361.7
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
+.+++||||+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++|
T Consensus 3 ~~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 78 (475)
T 1euh_A 3 KQYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRD 78 (475)
T ss_dssp CBCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHh
Confidence 4568999999997543 899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-CC----ccc-eeeecCCceEEEEcCCchhH
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RA----LQG-YTLREPIGVVGHIIPWNFPT 173 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~----~~~-~~~~~P~Gvv~~i~p~n~P~ 173 (414)
+++|++++++|+|||+.+++. |+..+++.+++++.++++..+...+.. .+ ... ++.++|+|||++|+|||||+
T Consensus 79 ~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~ 157 (475)
T 1euh_A 79 KEKIGAILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV 157 (475)
T ss_dssp HHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTT
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchH
Confidence 999999999999999999986 999999999999998877655543322 23 345 89999999999999999999
Q ss_pred HhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHH
Q 015020 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (414)
Q Consensus 174 ~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~ 253 (414)
...++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++|++.++++.|+.||++|.|+||||+.+|+.
T Consensus 158 ~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~ 237 (475)
T 1euh_A 158 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 237 (475)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHH
Confidence 99999999999999999999999999999999999999999999999999977778999999999999999999999999
Q ss_pred HHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccC
Q 015020 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (414)
Q Consensus 254 i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g 333 (414)
|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 238 i~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g 314 (475)
T 1euh_A 238 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIG 314 (475)
T ss_dssp HHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBS
T ss_pred HHHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCC
Confidence 999876 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 334 ~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+|.+ ++++|||+++.+++++.++|++++++|+++++||.. .|+|++||||.+++++|++++||+||||++|++|++
T Consensus 315 ~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~ 390 (475)
T 1euh_A 315 NPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTS 390 (475)
T ss_dssp CGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESC
T ss_pred Cccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCC
Confidence 9999 999999999999999999999999999999999975 589999999999999999999999999999999985
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-86 Score=666.61 Aligned_cols=371 Identities=26% Similarity=0.431 Sum_probs=356.4
Q ss_pred eEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhh
Q 015020 38 TFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSW 117 (414)
Q Consensus 38 ~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 117 (414)
+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||+.+
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 82 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE 82 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 489999999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred hhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCC
Q 015020 118 AKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197 (414)
Q Consensus 118 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~ 197 (414)
++. |+..+++.+++++..+++..+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 83 a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~ 161 (484)
T 3ros_A 83 SKE-EVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHN 161 (484)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 996 9999999999999998887666554445567899999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceE
Q 015020 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (414)
Q Consensus 198 ~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~i 277 (414)
+|+++.+|++++.++|+|+|++|+|+|++.++++ |+.||+||.|+||||+.+|+.|++.++ +++||+++|||||||+|
T Consensus 162 tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa-~~lk~v~lELGGk~p~i 239 (484)
T 3ros_A 162 VPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAG-KNLKKSTMELGGNDAFI 239 (484)
T ss_dssp CHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHH-HTTCEEEEECCCCCEEE
T ss_pred ChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHh-ccCCceEeecCCCCcce
Confidence 9999999999999999999999999998777788 999999999999999999999999999 78999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHH
Q 015020 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357 (414)
Q Consensus 278 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~ 357 (414)
|++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++
T Consensus 240 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~ 319 (484)
T 3ros_A 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQ 319 (484)
T ss_dssp ECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 358 IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 358 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 320 i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 375 (484)
T 3ros_A 320 VKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVED 375 (484)
T ss_dssp HHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESS
T ss_pred HHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCC
Confidence 99999999999999986556799999999999999999999999999999999986
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-86 Score=669.68 Aligned_cols=388 Identities=38% Similarity=0.608 Sum_probs=366.2
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015020 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (414)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (414)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 5 ~~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 82 (478)
T 3ty7_A 5 RDYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKEYEN 82 (478)
T ss_dssp EECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 3456899999999987888999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHH
Q 015020 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (414)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (414)
++++|++++++|+|||+.+++..|+..+++.++++++.+++..+... ....++.++|+|||++|+|||||+...++
T Consensus 83 ~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 158 (478)
T 3ty7_A 83 RKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTSL 158 (478)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHHH
Confidence 99999999999999999999435999999999999998877655432 24578899999999999999999999999
Q ss_pred hHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHH
Q 015020 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (414)
Q Consensus 179 ~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (414)
++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++|++.++++.|+.||++|.|+||||+.+|+.|++.+
T Consensus 159 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~a 238 (478)
T 3ty7_A 159 KLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKA 238 (478)
T ss_dssp HHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CST
T ss_pred HHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998778999999999999999999999999999999
Q ss_pred HhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCC
Q 015020 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (414)
Q Consensus 259 ~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~ 338 (414)
+ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++
T Consensus 239 a-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~ 317 (478)
T 3ty7_A 239 A-KDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPRED 317 (478)
T ss_dssp T-TTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTST
T ss_pred H-hcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 8 889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-C--CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI-G--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++||++++.+++++.++|++++++|+++++||... . ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 318 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~ 395 (478)
T 3ty7_A 318 GTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYND 395 (478)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCC
Confidence 9999999999999999999999999999999999432 1 3689999999999999999999999999999999985
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-86 Score=672.55 Aligned_cols=386 Identities=32% Similarity=0.550 Sum_probs=362.8
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCC-CCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 21 FTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
.+++||||+|+.+ +.+++++||+ ||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|+++
T Consensus 37 ~~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (516)
T 1uzb_A 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRR 112 (516)
T ss_dssp EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 4578999999963 5789999999 6999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceee--ccCCccceeeecCCceEEEEcCCchhHHhhH
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK--MSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (414)
+++|++++++|+|||+.+++. |+..+++.+++|+..++++.+...+ ...+...++.++|+|||++|+|||||+.+.+
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 191 (516)
T 1uzb_A 113 KRELEATLVYEVGKNWVEASA-DVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFT 191 (516)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHH
Confidence 999999999999999999986 9999999999999988877654422 1234567889999999999999999999999
Q ss_pred HhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHH
Q 015020 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (414)
Q Consensus 178 ~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (414)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|++||+|+.|+||||+.+|+.|++.
T Consensus 192 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~ 271 (516)
T 1uzb_A 192 GMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271 (516)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777889999999999999999999999999998
Q ss_pred HHh-----CCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhcccc
Q 015020 258 AAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (414)
Q Consensus 258 ~~~-----~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (414)
++. +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 272 aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 351 (516)
T 1uzb_A 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSV 351 (516)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred hhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccC
Confidence 862 468999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEe
Q 015020 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (414)
Q Consensus 333 g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (414)
|+| ++++++|||+++.+++++.++|++++++| ++++||...+..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 352 G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 429 (516)
T 1uzb_A 352 GPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429 (516)
T ss_dssp SCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeC
Confidence 999 99999999999999999999999999999 8999997632469999999999999999999999999999999998
Q ss_pred c
Q 015020 413 I 413 (414)
Q Consensus 413 ~ 413 (414)
+
T Consensus 430 ~ 430 (516)
T 1uzb_A 430 D 430 (516)
T ss_dssp S
T ss_pred C
Confidence 5
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-85 Score=668.30 Aligned_cols=382 Identities=29% Similarity=0.462 Sum_probs=361.6
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 015020 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (414)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (414)
.+++||||+|+.+. ++++++||+||+++++++.++.+|+++++++|++||+. .|+.+|..+|.++|+++++.|++|+
T Consensus 18 ~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 94 (501)
T 1uxt_A 18 VYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIERNL 94 (501)
T ss_dssp EECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHHHHHHHHHHHHhH
Confidence 46789999999753 78999999999999999999999999999999999951 4999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc--C---CccceeeecCCceEEEEcCCchhHHh
Q 015020 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--R---ALQGYTLREPIGVVGHIIPWNFPTTM 175 (414)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (414)
++|++++++|+|||..+++. |+..+++.+++++.++++..+...+.. . +...++.++|+|||++|+|||||+..
T Consensus 95 ~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 173 (501)
T 1uxt_A 95 DVFAEVLVMNAGKPKSAAVG-EVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFD 173 (501)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHH
Confidence 99999999999999999985 999999999999998887766554432 2 23578999999999999999999999
Q ss_pred hHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHH
Q 015020 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (414)
Q Consensus 176 ~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (414)
.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++|++ ++++.|+.||++|.|+||||+.+|+.|+
T Consensus 174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~ 252 (501)
T 1uxt_A 174 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVV 252 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999977 8899999999999999999999999999
Q ss_pred HHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCC
Q 015020 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (414)
Q Consensus 256 ~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 335 (414)
+.++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||
T Consensus 253 ~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 329 (501)
T 1uxt_A 253 KVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDP 329 (501)
T ss_dssp HHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred HhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCc
Confidence 9876 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCC-CeEeeEEEeeCC---CCCcccccccccceeeEEEE
Q 015020 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG-YYIEPTIFTNVT---EDMLIAKNEIFGPVMALMKF 411 (414)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g-~~~~Ptvl~~~~---~~~~i~~~E~fgPv~~v~~~ 411 (414)
.++++++|||+++.+++++.++|++++++||++++||.. .| +|++||||.+++ ++|++++||+||||++|++|
T Consensus 330 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~ 406 (501)
T 1uxt_A 330 RDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEV 406 (501)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEE
T ss_pred cccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEee
Confidence 999999999999999999999999999999999999975 58 999999999999 99999999999999999999
Q ss_pred ec
Q 015020 412 KI 413 (414)
Q Consensus 412 ~~ 413 (414)
++
T Consensus 407 ~~ 408 (501)
T 1uxt_A 407 KD 408 (501)
T ss_dssp SS
T ss_pred CC
Confidence 86
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-85 Score=662.49 Aligned_cols=384 Identities=27% Similarity=0.403 Sum_probs=363.7
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 015020 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (414)
Q Consensus 23 ~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (414)
++||||+|+.+. +.++.++||+||+++++++.++.+++++++++|++||+ .|+.++..+|.++|+++++.|++++++
T Consensus 7 ~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 83 (490)
T 3ju8_A 7 THYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRADE 83 (490)
T ss_dssp CEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999764 46899999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhh
Q 015020 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (414)
Q Consensus 103 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ 182 (414)
|++++++|+|||..+++. |+..+++.+++++...+...+...+...+...++.++|+|||++|+|||||+...++++++
T Consensus 84 la~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 162 (490)
T 3ju8_A 84 LARVIGEETGKPLWESAT-EVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVP 162 (490)
T ss_dssp HHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHH
Confidence 999999999999999986 9999999999999888776665443333445677899999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCC
Q 015020 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262 (414)
Q Consensus 183 ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~ 262 (414)
||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++| +.+.++.|+.||++|.|+||||+.+|+.|++.++ .+
T Consensus 163 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa-~~ 240 (490)
T 3ju8_A 163 ALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFG-GQ 240 (490)
T ss_dssp HHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTT-TC
T ss_pred HHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhh-cc
Confidence 999999999999999999999999999999999999999999 5689999999999999999999999999999998 78
Q ss_pred Ccce-eeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecch-HHHHHHHHHHHHhccccCC-CCCCC
Q 015020 263 LKPV-SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAWVVGD-PFDPA 339 (414)
Q Consensus 263 ~~~~-~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~~~f~~~l~~~~~~~~~g~-p~~~~ 339 (414)
++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|+++++++++|+ |.+++
T Consensus 241 ~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~ 320 (490)
T 3ju8_A 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPA 320 (490)
T ss_dssp TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSC
T ss_pred CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCc
Confidence 9998 7999999999999999999999999999999999999999999999996 9999999999999999999 99999
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++|||+++.+++++.++|++++++|+++++||...+..|+|++|||+. ++++|++++||+||||++|++|++
T Consensus 321 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~ 393 (490)
T 3ju8_A 321 PFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSD 393 (490)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESS
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCC
Confidence 9999999999999999999999999999999998655679999999998 999999999999999999999985
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-84 Score=666.30 Aligned_cols=388 Identities=26% Similarity=0.389 Sum_probs=361.6
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (414)
..+++||||+|+.+. ..+.++||.| |+++++++.++.+|+++||++|++||+ .|+.++..+|.++|++++++|++
T Consensus 62 ~~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~ 137 (563)
T 4e3x_A 62 EAIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLSG 137 (563)
T ss_dssp EECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHT
T ss_pred ccCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence 457899999999753 4678999998 799999999999999999999999999 89999999999999999999999
Q ss_pred h-HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceee-ccCCccceeeecCCceEEEEcCCchhHHhh
Q 015020 99 H-AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMF 176 (414)
Q Consensus 99 ~-~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 176 (414)
+ +++|+.++++|+|||+.+++..++..+++.+++++.+++++.+.... ...+...+.++.|+|||++|+|||||+...
T Consensus 138 ~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~ 217 (563)
T 4e3x_A 138 PRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGG 217 (563)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHH
T ss_pred ccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHH
Confidence 9 99999999999999999998623999999999999998877653321 112344567788889999999999999999
Q ss_pred HHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHH
Q 015020 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (414)
Q Consensus 177 ~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (414)
.+++++|| +||+||+|||+.+|+++.+|+++|.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++
T Consensus 218 ~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~ 296 (563)
T 4e3x_A 218 NLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWR 296 (563)
T ss_dssp HHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 59999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHHhCCCc------ceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhcc
Q 015020 257 AAATSNLK------PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 330 (414)
Q Consensus 257 ~~~~~~~~------~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~ 330 (414)
.++ ++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++
T Consensus 297 ~aa-~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l 375 (563)
T 4e3x_A 297 QVA-QNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRI 375 (563)
T ss_dssp HHH-HTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTC
T ss_pred HHH-hhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhc
Confidence 998 6777 499999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC-CCCCCCccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeE
Q 015020 331 VVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 408 (414)
Q Consensus 331 ~~g~p-~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v 408 (414)
++|+| .|+++++||++++.+++++.++|+++++ +|+++++||...+..|+|++|||+.+++++|++++||+||||++|
T Consensus 376 ~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V 455 (563)
T 4e3x_A 376 KVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTV 455 (563)
T ss_dssp CBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEE
T ss_pred cCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEE
Confidence 99999 9999999999999999999999999996 899999999876567999999999999999999999999999999
Q ss_pred EEEec
Q 015020 409 MKFKI 413 (414)
Q Consensus 409 ~~~~~ 413 (414)
++|++
T Consensus 456 ~~~~d 460 (563)
T 4e3x_A 456 YVYPD 460 (563)
T ss_dssp EEECG
T ss_pred EEECC
Confidence 99975
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-83 Score=645.29 Aligned_cols=373 Identities=28% Similarity=0.448 Sum_probs=355.3
Q ss_pred CCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCch
Q 015020 36 GKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH 115 (414)
Q Consensus 36 ~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 115 (414)
...++++||+||+++++++.++.+++++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||.
T Consensus 6 ~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 83 (462)
T 3etf_A 6 ATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPI 83 (462)
T ss_dssp CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred cCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 46789999999999999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred hhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecC
Q 015020 116 SWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195 (414)
Q Consensus 116 ~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps 195 (414)
.+++. |+..+++.+++++++.++..+.......+...++.++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 84 ~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps 162 (462)
T 3etf_A 84 KQARA-EVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHA 162 (462)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHH-HHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECC
Confidence 99986 99999999999999887766554222245567899999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCc
Q 015020 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP 275 (414)
Q Consensus 196 ~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~ 275 (414)
+.+|.++.+|.+++.++|+|+|++|+++| +.+.+..|+.||+++.|+||||+.+|+.|++.++ ++++|+++|+|||||
T Consensus 163 ~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa-~~~~~v~lElGGk~p 240 (462)
T 3etf_A 163 PNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAG-AALKKCVLELGGSDP 240 (462)
T ss_dssp TTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHH-HTTCCEEEECCCCEE
T ss_pred CCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHh-ccCCceEEEcCCCCc
Confidence 99999999999999999999999999999 4577899999999999999999999999999999 789999999999999
Q ss_pred eEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHH
Q 015020 276 LLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIL 355 (414)
Q Consensus 276 ~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~ 355 (414)
+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.
T Consensus 241 ~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~ 320 (462)
T 3etf_A 241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELH 320 (462)
T ss_dssp EEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHH
T ss_pred cEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 356 SYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 356 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 321 ~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~ 378 (462)
T 3etf_A 321 QQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKD 378 (462)
T ss_dssp HHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred HHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCC
Confidence 9999999999999999986556799999999999999999999999999999999985
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-82 Score=680.41 Aligned_cols=388 Identities=34% Similarity=0.520 Sum_probs=367.0
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (414)
..+++||||+|+. ++++++++||+| ++++++++.++.+++++|+++|++||. .|+.+|..+|.++|++++++|++
T Consensus 530 ~~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~ 605 (1026)
T 4f9i_A 530 KTYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARK 605 (1026)
T ss_dssp EEECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred cccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence 3578999999996 457899999998 999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHhhH
Q 015020 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (414)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (414)
++++|++++++|+|||+.++.. |+..+++.++||+.+++++.+...+. ..+..+++.++|+|||++|+|||||+.+.+
T Consensus 606 ~~~eLa~~~~~E~GK~~~ea~~-Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~ 684 (1026)
T 4f9i_A 606 RLFELSAWQVLEIGKQWDQAYA-DVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISM 684 (1026)
T ss_dssp THHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHH
Confidence 9999999999999999999986 99999999999999988776544332 345667889999999999999999999999
Q ss_pred HhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHH
Q 015020 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (414)
Q Consensus 178 ~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (414)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus 685 ~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~ 764 (1026)
T 4f9i_A 685 GMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIER 764 (1026)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HHh-----CCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhcccc
Q 015020 258 AAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (414)
Q Consensus 258 ~~~-----~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (414)
++. ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 765 aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~v 844 (1026)
T 4f9i_A 765 AAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKV 844 (1026)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred hhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhccc
Confidence 872 368999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEe
Q 015020 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (414)
Q Consensus 333 g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (414)
|+|.++++++||+|++.+++++.++|++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 845 G~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 923 (1026)
T 4f9i_A 845 GPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAK 923 (1026)
T ss_dssp CCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeC
Confidence 999999999999999999999999999999999 9999997654459999999999999999999999999999999997
Q ss_pred c
Q 015020 413 I 413 (414)
Q Consensus 413 ~ 413 (414)
+
T Consensus 924 d 924 (1026)
T 4f9i_A 924 D 924 (1026)
T ss_dssp S
T ss_pred C
Confidence 5
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-82 Score=645.31 Aligned_cols=383 Identities=24% Similarity=0.365 Sum_probs=348.2
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhh-cccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA-FDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
.+++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+ .|+.+|..+|.++|+++++.|++|
T Consensus 7 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (534)
T 2y53_A 7 LLKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAK 82 (534)
T ss_dssp ECCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred hhhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHh
Confidence 467899999997544 579999999999999999998 9999999999999 58 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCc-------eeecc-CC-ccceeeecCC-ceEEEEcCC
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-------VLKMS-RA-LQGYTLREPI-GVVGHIIPW 169 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~-------~~~~~-~~-~~~~~~~~P~-Gvv~~i~p~ 169 (414)
+++|++++++|+|||+.+++. |+..+++.+++|+.+++++.+. ..+.. .+ ...+..++|+ |||++|+||
T Consensus 83 ~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~Pw 161 (534)
T 2y53_A 83 RGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAF 161 (534)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCT
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCC
Confidence 999999999999999999986 9999999999999988665331 11211 11 2357889997 999999999
Q ss_pred chhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCH
Q 015020 170 NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 248 (414)
Q Consensus 170 n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~ag-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~ 248 (414)
|||+.+.++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+|+|++.+++..| +++|.|+||||+
T Consensus 162 N~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~ 238 (534)
T 2y53_A 162 NFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSA 238 (534)
T ss_dssp TCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCH
T ss_pred chHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCH
Confidence 99999999999999999999999999999999999999999999 79999999999654433322 679999999999
Q ss_pred HHHHHHHHHHH-hCCCcceeeecCCCCceEEcCCC-----CHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHH
Q 015020 249 DVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDV-----DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322 (414)
Q Consensus 249 ~~g~~i~~~~~-~~~~~~~~~elgG~~~~iV~~da-----dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~ 322 (414)
.+|+.|++.++ .+++||+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus 239 ~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 318 (534)
T 2y53_A 239 DTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEA 318 (534)
T ss_dssp HHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHH
Confidence 99999998763 36899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC------CCCCeEeeEEEeeCCCC--C
Q 015020 323 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG------KKGYYIEPTIFTNVTED--M 394 (414)
Q Consensus 323 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~------~~g~~~~Ptvl~~~~~~--~ 394 (414)
|+++++++++|||.++++++|||+++.+++++.++|+++ .+|+++++||.... ..|+|++||||.+++++ |
T Consensus 319 l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 397 (534)
T 2y53_A 319 LKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNAT 397 (534)
T ss_dssp HHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCS
T ss_pred HHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccC
Confidence 999999999999999999999999999999999999999 68999999997421 35899999999999987 6
Q ss_pred cccccccccceeeEEEEe
Q 015020 395 LIAKNEIFGPVMALMKFK 412 (414)
Q Consensus 395 ~i~~~E~fgPv~~v~~~~ 412 (414)
++++||+||||++|++|+
T Consensus 398 ~i~~eEiFGPVl~v~~~~ 415 (534)
T 2y53_A 398 LLHDVEVFGPVASVAPYR 415 (534)
T ss_dssp STTTCCCSSSEEEEEEEC
T ss_pred HHHhCCCcCCEEEEEEEC
Confidence 999999999999999998
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-81 Score=635.98 Aligned_cols=372 Identities=30% Similarity=0.459 Sum_probs=347.3
Q ss_pred CCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Q 015020 34 VSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGK 113 (414)
Q Consensus 34 ~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk 113 (414)
.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+++|..+|.++|++++++|++|+++|++++++|+||
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 80 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR 80 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSC
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3568999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred chhhhhhCcHHHHHHHHHHHHHHhhhhcCcee-ec-cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEE
Q 015020 114 LHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191 (414)
Q Consensus 114 ~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vv 191 (414)
+.... . |+...+..+++++..+.+...... .. .++...+..++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 81 ~~~~~-~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 81 LSITV-L-EIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp SHHHH-H-HHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred cHHHH-H-HHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 86544 4 899999999999988776543332 21 23445677889999999999999999999999999999999999
Q ss_pred EecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecC
Q 015020 192 VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 271 (414)
Q Consensus 192 lkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elg 271 (414)
+|||+.+|.++..+.+++.++|+|+|++++++| +.+.+..|+.| ++.|+||||+.+|+.|++.++ ++++|+++|||
T Consensus 159 lKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa-~~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAA-RRFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHH-HHTCCEEEECC
T ss_pred ecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhh-cccccccccCC
Confidence 999999999999999999999999999999999 55788889866 899999999999999999998 78999999999
Q ss_pred CCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHH
Q 015020 272 GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQF 351 (414)
Q Consensus 272 G~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~ 351 (414)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++.++++|+|.++++++||++++.++
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 314 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQA 314 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHH
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEeCCcccC-CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 352 DRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 352 ~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 315 ~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~ 377 (474)
T 4h7n_A 315 GIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPD 377 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred HHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECC
Confidence 9999999999999999999997642 4689999999999999999999999999999999985
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-78 Score=605.08 Aligned_cols=362 Identities=24% Similarity=0.396 Sum_probs=322.1
Q ss_pred CeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchh
Q 015020 37 KTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS 116 (414)
Q Consensus 37 ~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 116 (414)
..++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+|||+.
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 83 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKD 83 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 4688999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred hhhhCcHHHHHHHHHHHHHHhhhhcCc-eeec---cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEE
Q 015020 117 WAKMGDIPGAANTLRYYAGAADKIHGE-VLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV 192 (414)
Q Consensus 117 ~a~~~ev~~~~~~l~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvl 192 (414)
+++..|+..+++.++++++.+++.... ..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+
T Consensus 84 ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 163 (457)
T 3lns_A 84 VVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCII 163 (457)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEE
Confidence 998349999999999999887765432 2221 134567899999999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCC
Q 015020 193 KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272 (414)
Q Consensus 193 kps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG 272 (414)
|||+.+|+++.+|++++.++ +|+|++|+++| +.+.+..|++ +++|.|+||||+.+|+.|++.++ +++||+++||||
T Consensus 164 Kps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa-~~l~pv~lElGG 239 (457)
T 3lns_A 164 KPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAA-KHLTPVVLELGG 239 (457)
T ss_dssp ECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHH-TTTCCEEEECCC
T ss_pred ECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHh-hccCceEEECCC
Confidence 99999999999999999999 99999999999 6678999988 78999999999999999999999 899999999999
Q ss_pred CCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHH
Q 015020 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFD 352 (414)
Q Consensus 273 ~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~ 352 (414)
|||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++ |.++ ++||++++++++
T Consensus 240 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~ 314 (457)
T 3lns_A 240 KCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQ 314 (457)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHH
T ss_pred CCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987 6665 999999999999
Q ss_pred HHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 353 RILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 353 ~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++.++|+++. +++++||... ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 315 rv~~~i~~a~---~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 371 (457)
T 3lns_A 315 RLVSLLEATQ---GQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDS 371 (457)
T ss_dssp HHHHHHHHCC---SEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESC
T ss_pred HHHHHHHhcC---CeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCC
Confidence 9999999863 5999999763 3689999999999999999999999999999999986
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-78 Score=616.12 Aligned_cols=374 Identities=24% Similarity=0.306 Sum_probs=340.4
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEE-EEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 015020 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIA-RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (414)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~-~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (414)
+...++||||+|+.+.+ ++||+||++++ +++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+
T Consensus 27 ~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 99 (528)
T 3v4c_A 27 TPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADEIE 99 (528)
T ss_dssp CCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHH
T ss_pred ccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHH
Confidence 35578999999997532 99999999998 9999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhh--cCceee----c---cCCccceeeecCCceEEEEcC
Q 015020 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI--HGEVLK----M---SRALQGYTLREPIGVVGHIIP 168 (414)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~--~~~~~~----~---~~~~~~~~~~~P~Gvv~~i~p 168 (414)
+++++|++++++|+|||+.+++. |+..+++.+++|++.+++. ...... . ..+...++.++|+|||++|+|
T Consensus 100 ~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 178 (528)
T 3v4c_A 100 ARAEAITEIGSQETGLPEARLNG-ERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGA 178 (528)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECC
T ss_pred HhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECC
Confidence 99999999999999999999986 9999999999999988762 222221 0 123456889999999999999
Q ss_pred CchhHHhhH--HhHhhHhhcCCEEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEE
Q 015020 169 WNFPTTMFF--MKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKV 242 (414)
Q Consensus 169 ~n~P~~~~~--~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l----~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v 242 (414)
||||+...+ +++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|.+.++++.|+.||+|+.|
T Consensus 179 wN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V 258 (528)
T 3v4c_A 179 SNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAV 258 (528)
T ss_dssp SSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEE
T ss_pred CcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEE
Confidence 999999865 89999999999999999999999999998875 468999999999999887899999999999999
Q ss_pred EEecCHHHHHHHHHHHHhCCC--cceeeecCCCCceEEcCCC---CHHHHHHHHHHHHhccCCCccccCCceEeecc-hH
Q 015020 243 SFTGSTDVGRQVMQAAATSNL--KPVSLELGGKSPLLIFDDV---DVNTAADMALLGILFNKGEICVASSRVYVQEG-IY 316 (414)
Q Consensus 243 ~ftGs~~~g~~i~~~~~~~~~--~~~~~elgG~~~~iV~~da---dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~ 316 (414)
+||||+.+|+.|++.++ +++ +|+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ ++
T Consensus 259 ~fTGS~~~G~~i~~~aa-~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~ 337 (528)
T 3v4c_A 259 GFTGSLAGGRALFDLCA-ARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADA 337 (528)
T ss_dssp EEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHH
T ss_pred EEECChHHHHHHHHHHh-hccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHH
Confidence 99999999999999998 788 9999999999999999999 88999999999999999999999999999997 99
Q ss_pred HHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCC---
Q 015020 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTED--- 393 (414)
Q Consensus 317 ~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~--- 393 (414)
|+|+++|++++++++. ++.+||++++.+.+++.++++ ++|+++++||.. .|+|++|||+.+++++
T Consensus 338 d~f~~~l~~~~~~~~~------~~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~ 405 (528)
T 3v4c_A 338 DRFTTAAVEALAKVAP------QTMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLA 405 (528)
T ss_dssp HHHHHHHHHHHHTCCC------EECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHhccc------CCCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCccccc
Confidence 9999999999999864 367899998888877777764 489999999974 6999999999988887
Q ss_pred CcccccccccceeeEEEEec
Q 015020 394 MLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 394 ~~i~~~E~fgPv~~v~~~~~ 413 (414)
|++++||+||||++|++|++
T Consensus 406 ~~i~~eEiFGPVl~V~~~~~ 425 (528)
T 3v4c_A 406 DHALGEEVFGPLGLVVRVGS 425 (528)
T ss_dssp CGGGGCCCSSSEEEEEEESS
T ss_pred ChhhcccccCCeEEEEecCC
Confidence 89999999999999999986
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-76 Score=603.08 Aligned_cols=363 Identities=21% Similarity=0.285 Sum_probs=332.5
Q ss_pred CCCCCeEEeecCCCCceE-EEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 015020 33 SVSGKTFETIDPRTGEAI-ARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA 111 (414)
Q Consensus 33 ~~~~~~~~v~~P~tg~~i-~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~ 111 (414)
+.++++++++||+||+++ ++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 80 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET 80 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 345678999999999999 79999999999999999999999 899999999999999999999999999999999999
Q ss_pred CCchhhhhhCcHHHHHHHHHHHHHHhhh--hcCceeec----c-C-C-ccceeeecCCceEEEEcCCchhHHhh--HHhH
Q 015020 112 GKLHSWAKMGDIPGAANTLRYYAGAADK--IHGEVLKM----S-R-A-LQGYTLREPIGVVGHIIPWNFPTTMF--FMKV 180 (414)
Q Consensus 112 Gk~~~~a~~~ev~~~~~~l~~~~~~~~~--~~~~~~~~----~-~-~-~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~l 180 (414)
|||+.+++. |+..+++.+++|++.+++ ..+..+.. . + + ...++.++|+|||++|+|||||+... .+++
T Consensus 81 Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (510)
T 1ez0_A 81 ALPEVRLTG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDT 159 (510)
T ss_dssp CCCHHHHHH-HHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHH
T ss_pred CCCHHHHHH-HHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHH
Confidence 999999976 999999999999988875 33332210 0 1 1 13578999999999999999999985 4999
Q ss_pred hhHhhcCCEEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHH
Q 015020 181 SPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (414)
Q Consensus 181 ~~ALaaGN~vvlkps~~~~~~~~~l~~~l----~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (414)
++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+++|.+.++++.|++||+||.|+||||+.+|+.|++
T Consensus 160 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 239 (510)
T 1ez0_A 160 ASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN 239 (510)
T ss_dssp HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999998 56799999999999977788999999999999999999999999999
Q ss_pred HHHhCCC--cceeeecCCCCceEEcCCCCHH--HHHHHHHHHHhccCCCccccCCceEeecc-hHHHHHHHHHHHHhccc
Q 015020 257 AAATSNL--KPVSLELGGKSPLLIFDDVDVN--TAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWV 331 (414)
Q Consensus 257 ~~~~~~~--~~~~~elgG~~~~iV~~dadl~--~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~ 331 (414)
.++ +++ ||+++|||||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ ++|+|+++|++++++++
T Consensus 240 ~aa-~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 318 (510)
T 1ez0_A 240 LAH-ERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQS 318 (510)
T ss_dssp HHH-HSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred Hhh-ccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcC
Confidence 998 665 9999999999999999999999 99999999999999999999999999999 99999999999999986
Q ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCcccCCCCCeEeeEEEeeCCCC---Ccccccccccceee
Q 015020 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGKPIGKKGYYIEPTIFTNVTED---MLIAKNEIFGPVMA 407 (414)
Q Consensus 332 ~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~---~~i~~~E~fgPv~~ 407 (414)
+ ||++++.+.+++.++|+++++ +|+++++||. .|+|++|||+.+++++ |++++||+||||++
T Consensus 319 ~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~ 384 (510)
T 1ez0_A 319 P----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSL 384 (510)
T ss_dssp C----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEE
T ss_pred C----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEE
Confidence 3 688888899999999999994 8999999996 2899999999988887 99999999999999
Q ss_pred EEEEec
Q 015020 408 LMKFKI 413 (414)
Q Consensus 408 v~~~~~ 413 (414)
|++|++
T Consensus 385 v~~~~~ 390 (510)
T 1ez0_A 385 IVVCEN 390 (510)
T ss_dssp EEEESS
T ss_pred EEEeCC
Confidence 999986
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-76 Score=590.72 Aligned_cols=345 Identities=27% Similarity=0.402 Sum_probs=315.6
Q ss_pred CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHH
Q 015020 56 GDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135 (414)
Q Consensus 56 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~ 135 (414)
.+.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||..+++..|+..++..++++++
T Consensus 15 ~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 92 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQ 92 (469)
T ss_dssp ---CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 355689999999999999 999999999999999999999999999999999999999999975599999998888876
Q ss_pred HhhhhcCce----eeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHH
Q 015020 136 AADKIHGEV----LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 211 (414)
Q Consensus 136 ~~~~~~~~~----~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~ 211 (414)
......... .....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+|++++.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~ 172 (469)
T 3sza_A 93 KLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ 172 (469)
T ss_dssp HHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence 654432211 1112234678999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHH
Q 015020 212 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 291 (414)
Q Consensus 212 aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i 291 (414)
+ +|+|++|+++|++ +.+..|+.| ++|.|+||||+.+|+.|++.++ +++||+++|||||||+||++|||+|.|++.+
T Consensus 173 a-lP~gvv~vv~g~~-~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa-~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i 248 (469)
T 3sza_A 173 Y-LDKDLYPVINGGV-PETTELLKE-RFDHILYTGSTGVGKIIMTAAA-KHLTPVTLELGGKSPCYVDKNCDLDVACRRI 248 (469)
T ss_dssp H-SCTTTSCBCCCSH-HHHHHHTTS-CCSEEEEESCHHHHHHHHHHHH-TTTCCEEEECCCCCEEEECTTSCHHHHHHHH
T ss_pred h-CCcceEEEEECCH-HHHHHHHhc-CCCEEEEECCHHHHHHHHHHHh-hccCceEEecCCCCceEECCCCCHHHHHHHH
Confidence 8 9999999999954 455667777 8999999999999999999999 8999999999999999999999999999999
Q ss_pred HHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeC
Q 015020 292 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 371 (414)
Q Consensus 292 ~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~g 371 (414)
++++|.|+||.|++++|||||++++|+|+++|+++++++ +|+|.++++++|||+++++++++.++| +||++++|
T Consensus 249 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~G 322 (469)
T 3sza_A 249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYG 322 (469)
T ss_dssp HHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEEC
T ss_pred HHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeC
Confidence 999999999999999999999999999999999999998 699999999999999999999999998 69999999
Q ss_pred CcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 372 GKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 372 g~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
|... ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 323 G~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 363 (469)
T 3sza_A 323 GTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRS 363 (469)
T ss_dssp CCEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSS
T ss_pred CccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCC
Confidence 9864 4699999999999999999999999999999999985
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-73 Score=613.89 Aligned_cols=352 Identities=31% Similarity=0.468 Sum_probs=332.6
Q ss_pred EeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHH
Q 015020 53 IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRY 132 (414)
Q Consensus 53 v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~ 132 (414)
++.++.+++++|+++|++||. .|+.+|..+|.++|+++++.|++++++|++++++|+|||+.++.. |+..+++.++|
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~ai~~lr~ 620 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALS-ELREAADFCRY 620 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHH-HHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH-HHHHHHHHHHH
Confidence 789999999999999999999 899999999999999999999999999999999999999999986 99999999999
Q ss_pred HHHHhhhhcCce--eeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHH
Q 015020 133 YAGAADKIHGEV--LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 210 (414)
Q Consensus 133 ~~~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~ 210 (414)
|+..+++..+.. .+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 999988765543 333456678899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhC--CCcceeeecCCCCceEEcCCCCHHHHH
Q 015020 211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAA 288 (414)
Q Consensus 211 ~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~--~~~~~~~elgG~~~~iV~~dadl~~a~ 288 (414)
++|+|+|++|+|+|++.+ +..|+.||+|+.|+||||+.+|+.|++.++.. +++|+++|+|||||+||++|||++.|+
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 999999999999998766 99999999999999999999999999998832 489999999999999999999999999
Q ss_pred HHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEE
Q 015020 289 DMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 368 (414)
Q Consensus 289 ~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v 368 (414)
+.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.++|++++++| ++
T Consensus 780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v 858 (1001)
T 3haz_A 780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL 858 (1001)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE
T ss_pred HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998 88
Q ss_pred EeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 369 LTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 369 ~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+||..+ ..|+|+.|||+.+ +++++++||+||||++|++|++
T Consensus 859 -~gg~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~ 899 (1001)
T 3haz_A 859 -HFAGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRP 899 (1001)
T ss_dssp -EEECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECG
T ss_pred -eccccC-CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCC
Confidence 888764 4599999999974 7899999999999999999985
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-66 Score=521.88 Aligned_cols=336 Identities=19% Similarity=0.223 Sum_probs=293.7
Q ss_pred EEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHH
Q 015020 52 RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLR 131 (414)
Q Consensus 52 ~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~ 131 (414)
+++.++.+++++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+||+..+++..+....++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~--- 79 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASK--- 79 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHH---
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHH---
Confidence 3456678999999999999999 89999999999999999999999999999999999999998875323333333
Q ss_pred HHHHHhhhhcC-ceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHH---
Q 015020 132 YYAGAADKIHG-EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH--- 207 (414)
Q Consensus 132 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~--- 207 (414)
++..++..... .......+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++
T Consensus 80 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~ 159 (464)
T 3k9d_A 80 HVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIIS 159 (464)
T ss_dssp HHHHHHTTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHH
T ss_pred HHHHhhhcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHH
Confidence 33333332211 11222345678889999999999999999999999999999999999999999999999988654
Q ss_pred -HHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecC-CCCceEEcCCCCHH
Q 015020 208 -LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG-GKSPLLIFDDVDVN 285 (414)
Q Consensus 208 -~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elg-G~~~~iV~~dadl~ 285 (414)
++.++|+|+|++++|+|.+.+.++.|++||+||.|+||||+.+ ++.++ +++||+ +|+| ||+|+||++|||++
T Consensus 160 ~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~-~~~kpv-lelG~G~~p~iV~~dADl~ 233 (464)
T 3k9d_A 160 EAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAY-SSGTPA-IGVGPGNGPAFIERSANIP 233 (464)
T ss_dssp HHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHT-TSSSCE-EEBCCCCCEEEECTTSCHH
T ss_pred HHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHH-hcCCcE-EeeCCCCCeEEECCCCCHH
Confidence 5688999999999999987889999999999999999999984 45555 688999 7888 99999999999999
Q ss_pred HHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHH-------hccccCCCC-CCCCCccccCCHHHHHHHHHH
Q 015020 286 TAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA-------KAWVVGDPF-DPAVRQGPQVDKKQFDRILSY 357 (414)
Q Consensus 286 ~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~-------~~~~~g~p~-~~~~~~gpl~~~~~~~~~~~~ 357 (414)
.|++.+++++|+|+||.|+++++||||+++||+|+++|+++. +.+++|+|. ++++++||+++.++++++.++
T Consensus 234 ~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~ 313 (464)
T 3k9d_A 234 RAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANL 313 (464)
T ss_dssp HHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999985 466889887 778999999999999999999
Q ss_pred HHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 358 IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 358 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++.++.+|+++++||.. ++++++++. +|+||||++|++|++
T Consensus 314 ~~~a~~~ga~vl~gg~~--------------~v~~~~~~~-~E~fgPVl~v~~~~~ 354 (464)
T 3k9d_A 314 AGLTVPADARVLIAEET--------------KVGAKIPYS-REKLAPILAFYTAET 354 (464)
T ss_dssp TTCCCCTTCCEEEEECC--------------CCSTTCGGG-SCCCSSEEEEEEESS
T ss_pred hhhhhcCCCEEEEcCCC--------------CCCCCCccc-ccccCceEEEEEeCC
Confidence 99999999999999863 567888875 899999999999985
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-66 Score=519.69 Aligned_cols=334 Identities=19% Similarity=0.261 Sum_probs=287.1
Q ss_pred EeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHH-H
Q 015020 53 IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL-R 131 (414)
Q Consensus 53 v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l-~ 131 (414)
++.++.+++++++++|++||+ .|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..+.+.+ +
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~ 78 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN 78 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999999 8999999999999999999999999999999999999999998743566566655 2
Q ss_pred HHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHH-
Q 015020 132 YYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK- 210 (414)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~- 210 (414)
++.. .+.. ...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 79 ~~~~--~~~~-g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 79 KYKD--EQTC-GILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp HHTT--CCCS-EEC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhh--cccc-ccccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 3321 1111 11222234557889999999999999999999999999999999999999999999999998888775
Q ss_pred ---HcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHH
Q 015020 211 ---LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTA 287 (414)
Q Consensus 211 ---~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a 287 (414)
++|+|+|++|+++|.+.+.++.|++||+|+.|+||||+.+++ .++ +++||+++|+|||+|+||++|||++.|
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~-~~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAY-SSGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHH-TSSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHH-hcCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 789999999999998888999999999999999999998644 455 678999999999999999999999999
Q ss_pred HHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCE
Q 015020 288 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 367 (414)
Q Consensus 288 ~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~ 367 (414)
++.+++++|+|+||.|+++++||||+++||+|+++|+++ +||++++++++++.++|+++...|++
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~ 295 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAK 295 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGG
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCe
Confidence 999999999999999999999999999999999999875 39999999999999999877677887
Q ss_pred EEeCCccc---CCCCCeEeeEE-------EeeCCCCCcccccccccceeeEEEEec
Q 015020 368 LLTGGKPI---GKKGYYIEPTI-------FTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 368 v~~gg~~~---~~~g~~~~Ptv-------l~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+ +||... ...|+|++||+ +.++++++++++ |+||||++|++|++
T Consensus 296 v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~ 349 (452)
T 3my7_A 296 I-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADN 349 (452)
T ss_dssp G-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESS
T ss_pred E-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCC
Confidence 6 477542 12589999997 668899999876 89999999999975
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-66 Score=517.09 Aligned_cols=322 Identities=16% Similarity=0.139 Sum_probs=257.2
Q ss_pred EEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-------
Q 015020 39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA------- 111 (414)
Q Consensus 39 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~------- 111 (414)
-.++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+
T Consensus 9 ~~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~ 86 (463)
T 2h5g_A 9 SGVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRL 86 (463)
T ss_dssp --------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTS
T ss_pred CCCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccC
Confidence 35889999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred CCchh----hhhhCcHHHHHHHHHHHHHHhhhhcCceeecc---CCccceeeecCCceEEEEcCCchhHHhhHHhHhhHh
Q 015020 112 GKLHS----WAKMGDIPGAANTLRYYAGAADKIHGEVLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPAL 184 (414)
Q Consensus 112 Gk~~~----~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL 184 (414)
|||+. ++.. |+..+++.+++++.++++..+...+.. .+...++.++|+|||++|+||| |.+.. +++++||
T Consensus 87 Gk~~~~rl~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~AL 163 (463)
T 2h5g_A 87 AAPLLKRLSLSTS-KLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAI 163 (463)
T ss_dssp CHHHHHTTCCCHH-HHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHH
T ss_pred CCchhhhhhhhHH-HHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHH
Confidence 79997 4554 999999999999988877666543321 3445689999999999999776 66666 7999999
Q ss_pred hcCCEEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHh
Q 015020 185 AAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (414)
Q Consensus 185 aaGN~vvlkps~~~~~~~~~l~~~l~~a----glP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~ 260 (414)
++||+||+|||+.+|+++.+|++++.++ | |+|++|+|+| +.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 164 aaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa- 240 (463)
T 2h5g_A 164 ASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK- 240 (463)
T ss_dssp HHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS-
T ss_pred HcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC-
Confidence 9999999999999999999999999999 9 9999999999 6678999999999999999999999999998876
Q ss_pred CCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCC
Q 015020 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (414)
Q Consensus 261 ~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~ 340 (414)
+||+++|||||||+||++|||++.|++.+++++|.| ||.|++++|||||++++|
T Consensus 241 --l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d----------------------- 294 (463)
T 2h5g_A 241 --GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR----------------------- 294 (463)
T ss_dssp --SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-----------------------
T ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-----------------------
Confidence 899999999999999999999999999999999999 999999999999999998
Q ss_pred CccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
||+ + .+++++++++|++++.|+... ..|+|+ +++|++++||+||||++|++|++
T Consensus 295 --~p~-----~---~~~i~~~~~~Ga~v~~G~~~~-~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~ 348 (463)
T 2h5g_A 295 --TPL-----F---DQIIDMLRVEQVKIHAGPKFA-SYLTFS--------PSEVKSLRTEYGDLELCIEVVDN 348 (463)
T ss_dssp --SHH-----H---HHHHHHHHHTTCEEEECHHHH-C-----------------CCSSCCCCSSEEEEEEESS
T ss_pred --hHH-----H---HHHHHHHHhCCCEEEeCCccc-ccCccC--------CCCchHHhccccCceEEEEEeCC
Confidence 343 2 345888889999998555422 235443 57899999999999999999986
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-64 Score=505.22 Aligned_cols=313 Identities=16% Similarity=0.148 Sum_probs=262.7
Q ss_pred HHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCch----hhhhhCcHHH-HHHHHHHHH
Q 015020 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAKMGDIPG-AANTLRYYA 134 (414)
Q Consensus 60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~ev~~-~~~~l~~~~ 134 (414)
.+++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+|||. .++...|+.. ++..+++++
T Consensus 15 ~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a 92 (468)
T 1vlu_A 15 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 92 (468)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred hHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHH
Confidence 58899999999999 8999999999999999999999999999999999999998 7875237888 888889888
Q ss_pred HHhhhhc------Cceeec---cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHH
Q 015020 135 GAADKIH------GEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 205 (414)
Q Consensus 135 ~~~~~~~------~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l 205 (414)
+.++... +...+. ..+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..|
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 170 (468)
T 1vlu_A 93 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREM 170 (468)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHH
Confidence 8776654 443331 12445789999999999999999 9 99999999999999999999999999999999
Q ss_pred HHHHH----H----cCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceE
Q 015020 206 AHLAK----L----AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (414)
Q Consensus 206 ~~~l~----~----aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~i 277 (414)
++++. + +|+|+|++|+|+ ++.++++.|..||+||.|+||||+.+|+.|++.+ +||+++|||||||+|
T Consensus 171 ~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~i 245 (468)
T 1vlu_A 171 AKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIY 245 (468)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEE
T ss_pred HHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceE
Confidence 99995 8 999999999999 6667899999999999999999999999999865 599999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhcccc---CCCCCCCCCccccCCHHHHHHH
Q 015020 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVRQGPQVDKKQFDRI 354 (414)
Q Consensus 278 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~p~~~~~~~gpl~~~~~~~~~ 354 (414)
|++|||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|.++++++++ |+|.+
T Consensus 246 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------- 306 (468)
T 1vlu_A 246 LDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------- 306 (468)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------
T ss_pred ECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------
Confidence 99999999999999999999999 99999999999999 9999999999999987 87642
Q ss_pred HHH-HHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 355 LSY-IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 355 ~~~-i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
.++ |++++ ++++||. | +.||+| ++++|++++||+||||++|++|++
T Consensus 307 ~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~ 353 (468)
T 1vlu_A 307 KTAYFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTS 353 (468)
T ss_dssp HHHHHHHHH----HHTCCCH-----H--HHTTBC---------------CCCCEEEECCS
T ss_pred hcccccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeCC
Confidence 345 66665 3667775 4 689987 789999999999999999999986
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-61 Score=479.83 Aligned_cols=306 Identities=21% Similarity=0.218 Sum_probs=255.8
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchh----hhhh-------CcHHHH
Q 015020 58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS----WAKM-------GDIPGA 126 (414)
Q Consensus 58 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~-------~ev~~~ 126 (414)
.+++++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+||+.. +++. .|+..+
T Consensus 25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~ 102 (444)
T 4ghk_A 25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM 102 (444)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence 5789999999999999 89999999999999999999999999999999999999853 4431 278889
Q ss_pred HHHHHHHHHHhhhhcCceeec---cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHH
Q 015020 127 ANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203 (414)
Q Consensus 127 ~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~ 203 (414)
++.+++++.+++.. +...+. ..+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++.
T Consensus 103 ~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 179 (444)
T 4ghk_A 103 VEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT 179 (444)
T ss_dssp HHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99999999887643 333332 23456789999999999999999 8 588999999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCcEEEEeCCch-hHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEE
Q 015020 204 YFAHLA----KLAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278 (414)
Q Consensus 204 ~l~~~l----~~aglP~g~~~~v~g~~~-~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV 278 (414)
+|++++ .++|+|+|++|+++|.+. .+++.|..||+||.|+||||+.+|+.|++.+ +||+++|||||||+||
T Consensus 180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence 999997 789999999999998654 5788899999999999999999999998765 5999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhcccc---CCCCCCCCCccccCCHHHHHHHH
Q 015020 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVRQGPQVDKKQFDRIL 355 (414)
Q Consensus 279 ~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~p~~~~~~~gpl~~~~~~~~~~ 355 (414)
++|||++.|++.+++++|.|+| .|++++|||||++++|+|+++|+++++++++ |+|. ..
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~ 317 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------AR 317 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HH
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HH
Confidence 9999999999999999999999 9999999999999999999999999999988 7652 13
Q ss_pred HHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 356 SYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 356 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++|+++. .| ++ ++++|++++||+||||++|++|++
T Consensus 318 ~~i~~a~---------------~G------~~--~~~~~~~~~eEiFGPVl~v~~~~~ 352 (444)
T 4ghk_A 318 AVLEAAG---------------VG------PL--VDATDEDWRTEYLAPVLAIKIVDG 352 (444)
T ss_dssp HHHHHTT---------------CC------CC--EECCSGGGTCC---CEEEEEEESS
T ss_pred HHHHhcc---------------cC------cc--cCCCchhhhccccCceEEEEEeCC
Confidence 5666542 12 12 356899999999999999999975
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-61 Score=477.67 Aligned_cols=305 Identities=18% Similarity=0.203 Sum_probs=266.2
Q ss_pred CHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCch----hhhhh-------CcHHH
Q 015020 57 DKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAKM-------GDIPG 125 (414)
Q Consensus 57 ~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~-------~ev~~ 125 (414)
..+++++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+||+. .++.. .|+..
T Consensus 12 ~~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~ 89 (427)
T 1o20_A 12 HMDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDE 89 (427)
T ss_dssp --CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHH
Confidence 34689999999999999 8999999999999999999999999999999999999986 45431 38999
Q ss_pred HHHHHHHHHHHhhhhcCceeec---cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHH
Q 015020 126 AANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202 (414)
Q Consensus 126 ~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~ 202 (414)
+++.+++++.+.+. .+...+. ..+...++.++|+|||++|+||| +...++++++||++||+||+|||+.+|+++
T Consensus 90 ~~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~ 166 (427)
T 1o20_A 90 MIKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSN 166 (427)
T ss_dssp HHHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHH
T ss_pred HHHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHH
Confidence 99999999988765 3443332 12445688999999999999986 468899999999999999999999999999
Q ss_pred HHHHHHHH----HcCCCCCcEEEEeCC-chhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceE
Q 015020 203 LYFAHLAK----LAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (414)
Q Consensus 203 ~~l~~~l~----~aglP~g~~~~v~g~-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~i 277 (414)
.+|++++. ++|+|+|++|+|+|. ..+.++.|..||++|.|+||||+.+|+.|++.+ +||+++|||||||+|
T Consensus 167 ~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~i 242 (427)
T 1o20_A 167 KAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIF 242 (427)
T ss_dssp HHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEE
Confidence 99999998 689999999999984 456788999999999999999999999999876 499999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHH
Q 015020 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357 (414)
Q Consensus 278 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~ 357 (414)
|++|||+|.|++.+++++|.|+| .|++++|||||++++|+|+++|++++++++++
T Consensus 243 V~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------ 297 (427)
T 1o20_A 243 VDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------ 297 (427)
T ss_dssp ECTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE------------------------
T ss_pred EeCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe------------------------
Confidence 99999999999999999999999 99999999999999999999999999988652
Q ss_pred HHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 358 IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 358 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+.||.+. .| |+ ||| ++++|++++||+||||++|++|++
T Consensus 298 -----------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~ 335 (427)
T 1o20_A 298 -----------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKN 335 (427)
T ss_dssp -----------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESS
T ss_pred -----------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEEECC
Confidence 2233221 13 33 885 345789999999999999999986
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=90.58 E-value=13 Score=35.83 Aligned_cols=239 Identities=16% Similarity=0.160 Sum_probs=124.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-CCch------hhhhhCcHH---------------HHHHHHHHH
Q 015020 76 PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA-GKLH------SWAKMGDIP---------------GAANTLRYY 133 (414)
Q Consensus 76 ~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-Gk~~------~~a~~~ev~---------------~~~~~l~~~ 133 (414)
.|+..+..+-.+..+.+.+.++++.|+-+...++.. |... ..... |+. .+.+.++.|
T Consensus 26 ~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~-ei~~A~~~l~~~~~~ai~~A~~~I~~f 104 (423)
T 4gic_A 26 AWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRD-VLEAAWQALPAEQAKALREAAERIRAY 104 (423)
T ss_dssp CCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHH-HHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred cccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHH-HHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 344555555556667777777777666554444432 2111 11111 222 223333333
Q ss_pred HHHhhhhcCceeeccCCccceeeecCCceEEEEcCCc---hhHHhhHHhHhhHhhcCCE-EEE-ecCCCChHHHHHHHHH
Q 015020 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWN---FPTTMFFMKVSPALAAGCT-MIV-KPAEQTPLIALYFAHL 208 (414)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~l~~ALaaGN~-vvl-kps~~~~~~~~~l~~~ 208 (414)
.+... .........+|.....++.|+--|++..|.- ||-.. +...+||-.+|+. +|+ -|++. -.....+.-+
T Consensus 105 h~~Q~-~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsv-LM~aiPAkVAGV~~Iv~~tPp~~-G~i~p~iL~A 181 (423)
T 4gic_A 105 AERQK-LDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSSV-LMNAVPAKVAGVPELIMAVPAPR-GELNALVLAA 181 (423)
T ss_dssp HHHHC-CCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHHH-HHHHHHHHHHTCSEEEEECCCGG-GCCCHHHHHH
T ss_pred HHhcc-cCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhHH-HHhhccHHHhCCCeEEEecCCCC-CCccHHHHHH
Confidence 32111 1111122345666778899999999999943 66444 5557899999986 333 34332 1122223333
Q ss_pred HHHcCCCCCcEEEEeCCchhHHHHhhh----CCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCce-EEcCCCC
Q 015020 209 AKLAGVPDGVLNVVPGFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL-LIFDDVD 283 (414)
Q Consensus 209 l~~aglP~g~~~~v~g~~~~~~~~l~~----~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~-iV~~dad 283 (414)
...+|+. .+..-.|.+.-.+|.- -|.||.|+=.|..-+... +..- .+..-+=+.-|-.--+ |-++++|
T Consensus 182 A~l~Gv~----eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v-~g~VgIDm~AGPSEilViAD~~a~ 254 (423)
T 4gic_A 182 AYISGVD----RVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLV-FGQVGIDMVAGPSEILVISDGRTD 254 (423)
T ss_dssp HHHHTCC----EEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHH-BTTBEECCCCCCCEEEEEECSCSC
T ss_pred HHhcCCc----EEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHh-cCCcCcccccccceEEEEeCCCCC
Confidence 4556653 2333335454445543 678999999999877543 2222 1211122222323333 3345689
Q ss_pred HHHHHHHHHHHHhccCCCccccCCceEeecc--hHHHHHHHHHHHHhcc
Q 015020 284 VNTAADMALLGILFNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAW 330 (414)
Q Consensus 284 l~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~--i~~~f~~~l~~~~~~~ 330 (414)
.+..+..++.-+=+... .+.++|..+ +.+++.+.+.+.+..+
T Consensus 255 p~~vAaDLlsQAEHd~~-----a~~iLvT~s~~la~~V~~~i~~~l~~l 298 (423)
T 4gic_A 255 PDWIAMDLFSQAEHDED-----AQAILISPDAAHLEAVQASIERLLPGM 298 (423)
T ss_dssp HHHHHHHHHHHHTTCTT-----CEEEEEESCHHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHhhccCCC-----CeEEEEeCcHHHHHHHHHHHHHHHhhC
Confidence 99999888887766543 234566544 4455555555555443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 414 | ||||
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-155 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-152 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-118 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 1e-104 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 2e-83 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-82 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 2e-69 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-63 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 3e-36 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 2e-29 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 1e-11 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 446 bits (1147), Expect = e-155
Identities = 220/397 (55%), Positives = 287/397 (72%), Gaps = 1/397 (0%)
Query: 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP 76
+ K+TK+FIN E+ SVSGK F +P T E + + EGDKEDVD AVKAARQAF G
Sbjct: 9 LQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGS 68
Query: 77 -WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
W +ER ++ K ADLIE +LA +EA++ GKL S A + D+ G TLRY AG
Sbjct: 69 PWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAG 128
Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
ADKI G + M YT EP+GV G IIPWNFP MF K+ PAL+ G T++VKPA
Sbjct: 129 WADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPA 188
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
EQTPL AL+ L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ +
Sbjct: 189 EQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK 248
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
+AA SNLK VSLELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E I
Sbjct: 249 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESI 308
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375
YDEF ++ VE+AK +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L GG P
Sbjct: 309 YDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPW 368
Query: 376 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
G KGY+I+PT+F++VT+DM IAK EIFGPV +MKFK
Sbjct: 369 GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFK 405
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 437 bits (1126), Expect = e-152
Identities = 215/399 (53%), Positives = 275/399 (68%), Gaps = 1/399 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF
Sbjct: 7 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 66
Query: 75 GP-WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYY 133
G W R + R ++ + ADLIE LA LE LD GK + + + D+ LRYY
Sbjct: 67 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 126
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 127 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 186
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR
Sbjct: 187 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 246
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ A SR +VQE
Sbjct: 247 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQE 306
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 373
IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL GG
Sbjct: 307 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 366
Query: 374 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+GY+I+PT+F +V + M IAK EIFGPVM ++KFK
Sbjct: 367 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 405
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 351 bits (901), Expect = e-118
Identities = 147/395 (37%), Positives = 227/395 (57%), Gaps = 12/395 (3%)
Query: 25 FINGEFVDSVSGKTFE-TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
+ G + S G T E +P TG + ++ E+VD AV++A+ A+ W + +G
Sbjct: 23 YWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLK--WSKMAGI 80
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
ER +ML+ A +I E + +A LE ++ GK + DI A + YYAG A + G+
Sbjct: 81 ERSRVMLEAARIIRERRDNIAKLEVINNGKTITE-AEYDIDAAWQCIEYYAGLAPTLSGQ 139
Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
+++ YT REP+GV I+ WN+P + K +PALA G ++ KP+ TP+ +
Sbjct: 140 HIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGV 199
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
A + AGVP G++NVV G G G+ + H ++ KVSFTGS G++VM+ +A +
Sbjct: 200 ILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA-KTV 257
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
K V+LELGGKSPLLIF D ++ A AL+ +G++C +RV+VQ I +F +++
Sbjct: 258 KHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEV 317
Query: 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG------K 377
V++ KA VVGDP R G + K Q D++L ++ K+EGA +L GG+P+ K
Sbjct: 318 VKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLK 377
Query: 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
GY++ P + N +DM K EIFGPVM+++ F
Sbjct: 378 NGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFD 412
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 314 bits (804), Expect = e-104
Identities = 137/393 (34%), Positives = 197/393 (50%), Gaps = 7/393 (1%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
KL INGE V G+ +P TG+ + IAE E VD AV+AA AF W + +
Sbjct: 3 HKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTT 59
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGK-LHSWAKMGDIPGAANTLRYYAGAADKI 140
R +LK AD+IEE+ +V A LE+ + GK LHS + A
Sbjct: 60 PKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLN 119
Query: 141 HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
+ R+P+GVV I PWN+P M K++PALAAG +++KP+E TPL
Sbjct: 120 GLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPL 179
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
AL A LAK P GV+N++ G G T G + H + VS TGS G ++
Sbjct: 180 TALKLAELAK-DIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIIS-HTA 237
Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
S++K +ELGGK+P+++FDD D+ + +N G+ C A+ R+Y Q+GIYD
Sbjct: 238 SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLV 297
Query: 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT-LLTGGKPIGKKG 379
+KL G P D + GP +R+ +E K G ++TGG+ G
Sbjct: 298 EKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNG 357
Query: 380 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
YY PT+ +D I + E+FGPV+++ F
Sbjct: 358 YYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFD 390
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 262 bits (670), Expect = 2e-83
Identities = 122/398 (30%), Positives = 205/398 (51%), Gaps = 15/398 (3%)
Query: 23 KLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
L+I GE+VD+ + +++P E + A+ K + + A++AA +AF W +
Sbjct: 39 PLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKT--WKDWP 94
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD--K 139
+R ++LK A L+ L + GK D+ A + + YYA AA +
Sbjct: 95 QEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVE-ASADVAEAIDFIEYYARAALRYR 153
Query: 140 IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
+ + P+G I PWNFP +F + +A G T+I KPAE
Sbjct: 154 YPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAV 213
Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
++ + AG P GV+N +PG G GA + H I ++FTGS +VG ++ +AA
Sbjct: 214 VVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAG 273
Query: 260 -----TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
+ K +E GGK+ +++ + D + AA+ ++ +G+ C A+SR+ + +G
Sbjct: 274 RLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQG 333
Query: 315 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 374
Y+ ++++++A+ VG P + GP V +Q ++LSYIE GK EG +L GGK
Sbjct: 334 AYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVL-GGKR 391
Query: 375 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+ +GY+I PT+FT V IA+ EIFGPV+++++ K
Sbjct: 392 LEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 259 bits (662), Expect = 1e-82
Identities = 116/395 (29%), Positives = 183/395 (46%), Gaps = 16/395 (4%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
K ++NGE+ S + +P +G + + E+VD +A++A W S
Sbjct: 5 KNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQ--PAWRALSY 60
Query: 83 AERRGIMLKFADLIEEHAEVLAVLEALDAGK-----LHSWAKMGDIPGAANTLRYYAGAA 137
ER + K AD++ E + + + + K + + +I A
Sbjct: 61 IERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGE 120
Query: 138 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
G S+ REP+G+V I P+N+P + K++PAL AG + KP Q
Sbjct: 121 VLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQ 180
Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
+ L A AG+P GV N + G G G I H ++ ++FTGST +G ++ +
Sbjct: 181 GSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 240
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
A ++P+ LELGGK ++ +D D+ A + G G+ C A RV V E + D
Sbjct: 241 AG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVAD 297
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 377
E +K+ EK A +G+P D A P +D K D + I +GAT LT K +
Sbjct: 298 ELVEKIREKVLALTIGNPEDDADIT-PLIDTKSADYVEGLINDANDKGATALTEIK---R 353
Query: 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+G I P +F VT DM +A E FGPV+ +++
Sbjct: 354 EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVT 388
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 225 bits (574), Expect = 2e-69
Identities = 111/409 (27%), Positives = 192/409 (46%), Gaps = 15/409 (3%)
Query: 11 KSLFKM-PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAAR 69
+ + K + ++ GE+ S G+ E P IA++ +E+V+ +
Sbjct: 5 EGVIKEKGGVPVYPSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLF 62
Query: 70 QAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANT 129
+ G ER ++ K AD+IE + +V A + ++AGK S A +G++ A +
Sbjct: 63 KRGRWS-ARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAA-VGEVKAAVDR 120
Query: 130 LRYYAGAADKIHGEVLKM-----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPAL 184
LR KI G+ + + +G REP+GVV I P+N+P K++ +
Sbjct: 121 LRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSF 180
Query: 185 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 244
G ++VKP+ PL A AG P + ++ G A +A + VSF
Sbjct: 181 IYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVA-DDRVAAVSF 239
Query: 245 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICV 304
TGST+VG +V++ +K +ELGG P ++ +D D++ AAD GI G+ C
Sbjct: 240 TGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCD 296
Query: 305 ASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE 364
A V + +Y + +++ ++ + VGDP DP V GP + D +++ IE +
Sbjct: 297 AIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEK 356
Query: 365 GATLLTGGKPIGKKGYYIEP-TIFTNVTEDMLIAKNEIFGPVMALMKFK 412
G +L GG+ +G + +DM++ K E+F PV + ++ K
Sbjct: 357 GGRVLAGGRRLGPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVK 405
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 209 bits (531), Expect = 1e-63
Identities = 95/355 (26%), Positives = 147/355 (41%), Gaps = 17/355 (4%)
Query: 61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120
+ VK AR+AF+ S R + +I E+ + ++ A D GK +
Sbjct: 2 ISDTVKRAREAFNS--GKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYY 59
Query: 121 GDIPGAANTLRYYAGAADKI-HGEVLKMSRALQG---YTLREPIGVVGHIIPWNFPTTMF 176
++ L E + +R Q Y EP+GVV I WN+P +
Sbjct: 60 EEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLT 119
Query: 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH 236
+ A+AAG +I+KP+E + +A A L + G
Sbjct: 120 IQPMVGAVAAGNAVILKPSEVSGHMADLLATLIP---QYMDQNLYLVVKGGVPETTELLK 176
Query: 237 MDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 296
D + +TGST VG+ VM AAA +L PV+LELGGKSP + D D++ A G
Sbjct: 177 ERFDHIMYTGSTAVGKIVMAAAA-KHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF 235
Query: 297 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILS 356
N G+ CVA + I ++ +KL + K G+ + G ++ + F R+
Sbjct: 236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLK-DFYGEDAKQSRDYGRIINDRHFQRVKG 294
Query: 357 YIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
I++ K YI PTI +V + + EIFGPVM ++
Sbjct: 295 LIDNQKVAHGGTWDQS------SRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCV 343
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 136 bits (343), Expect = 3e-36
Identities = 65/397 (16%), Positives = 119/397 (29%), Gaps = 31/397 (7%)
Query: 35 SGKTFETIDPRTGEAIA-RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFA 93
+ F + TGEA+ + +V+ A AA + + R + ++R ++ A
Sbjct: 1 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARD--FRRLNNSKRASLLRTIA 58
Query: 94 DLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM------ 147
+E ++ + L+ G+I AN LR +A + +
Sbjct: 59 SELEARSDDIIARAHLETALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPT 117
Query: 148 ---SRALQGYTLREPIGVVGHIIPWNFPT--TMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
+ +G V NFP + + ALAAGC +IVK P +
Sbjct: 118 RAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTS 177
Query: 203 LYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
A + A +P + ++ G G A+ SH +I V FTGS GR + A
Sbjct: 178 QIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLA 237
Query: 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADM---ALLGILFNKGEICVASSRVYVQEGI 315
G + AD+ + + G+ C V+
Sbjct: 238 HERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTP 297
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375
+ + + + + I+ +
Sbjct: 298 ETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFS---------QAE 348
Query: 376 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+ + EIFGP ++ +
Sbjct: 349 SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCE 385
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 116 bits (290), Expect = 2e-29
Identities = 38/308 (12%), Positives = 87/308 (28%), Gaps = 15/308 (4%)
Query: 59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA 118
+++ K R+A+D + E+ + K A+ ++E + + +D K
Sbjct: 1 DELLEKAKKVREAWDV--LRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERG 58
Query: 119 K-----------MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHII 167
I G D + + R R + + I
Sbjct: 59 VKESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGI 118
Query: 168 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF-G 226
+ + AL +G T++++ + A + F
Sbjct: 119 IYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIE 178
Query: 227 PTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNT 286
T + + + + + G ++ + PV G + + + D+
Sbjct: 179 NTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKK 238
Query: 287 AADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
A + + G A + ++ I EF +VE+ + V R+
Sbjct: 239 AVPVIINAKTQRPGTCNAAEKLLVHEK-IAKEFLPVIVEELRKHGVEVRGCEKTREIVPD 297
Query: 347 DKKQFDRI 354
+
Sbjct: 298 VVPATEDD 305
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 63.7 bits (154), Expect = 1e-11
Identities = 39/356 (10%), Positives = 98/356 (27%), Gaps = 33/356 (9%)
Query: 65 VKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALD---AGKLHSWAKMG 121
K AR+A + S R I+ K D ++ +A + +D A + +
Sbjct: 9 AKNARKAGNI--LKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLL 66
Query: 122 D---------IPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLRE-PIGVVGHIIPWNF 171
++ A D + G+V G TL + V ++ +
Sbjct: 67 KRLDLFKGDKFEVMLQGIKDVAELEDPV-GKVKMARELDDGLTLYQVTAPVGVLLVIFES 125
Query: 172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK------LAGVPDGVLNVVPGF 225
+ + ++ +G I+K +++ A + + V +V
Sbjct: 126 RPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIE 185
Query: 226 GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVN 285
+ + + + +++ + PV G + + +D D+
Sbjct: 186 TRQDVSDLLDQDEYIDLVVPRG---SNALVRKIKDTTKIPVLGHADGICSIYLDEDADLI 242
Query: 286 TAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ 345
A ++L + + +E + V +
Sbjct: 243 KAKRISLDAKTNYPAGCNAMETLLIN-PKFSKWWEVLENLTLEGGV-------TIHATKD 294
Query: 346 VDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEI 401
+ FD++ + + + + ++ + A I
Sbjct: 295 LKTAYFDKLNELGKLTEAIQCKTVDADEEQDFDKEFLSLDLAAKFVTSTESAIQHI 350
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 414 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 92.41 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=2.5e-90 Score=702.08 Aligned_cols=405 Identities=55% Similarity=0.927 Sum_probs=385.0
Q ss_pred ccccccCCCCccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccC-CCCCCCHHHHHH
Q 015020 9 SCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRG 87 (414)
Q Consensus 9 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~ 87 (414)
|+.+.++...++..++||||+|+.+.++++++++||+||+++++++.++.+|+++||++|++||+.+ .|+++|.++|.+
T Consensus 1 ~~~~~~~~~~~~~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~ 80 (494)
T d1bxsa_ 1 DVPAPLTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGR 80 (494)
T ss_dssp CCCCCCSSCCCCCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHH
T ss_pred CCCCCCCCCCcCcCCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHH
Confidence 4566788888888899999999998888999999999999999999999999999999999999632 499999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEc
Q 015020 88 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHII 167 (414)
Q Consensus 88 ~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 167 (414)
+|++++++|++++++|++++++|+|||..++...|+...++.+++++.+.++..+...+...+...++.++|+|||++|+
T Consensus 81 iL~kia~~L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 160 (494)
T d1bxsa_ 81 LLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQII 160 (494)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeecCCCCceeEEEEccEEEEEEEe
Confidence 99999999999999999999999999999876558999999999999999888777766666778899999999999999
Q ss_pred CCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecC
Q 015020 168 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247 (414)
Q Consensus 168 p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs 247 (414)
|||||+.+.++++++||++||+||+|||+.+|.++.+|++++.++|||+|++|+|+|++.++++.|++||+|+.|+||||
T Consensus 161 PwN~P~~~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS 240 (494)
T d1bxsa_ 161 PWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGS 240 (494)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESC
T ss_pred CccchhHHHHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHH
Q 015020 248 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 327 (414)
Q Consensus 248 ~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~ 327 (414)
+.+|+.|++.++..++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++
T Consensus 241 ~~~g~~i~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~ 320 (494)
T d1bxsa_ 241 TEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERA 320 (494)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhh
Confidence 99999999988845799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceee
Q 015020 328 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA 407 (414)
Q Consensus 328 ~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~ 407 (414)
+++++|+|.++++++||++++++++++.++|++|+++||++++||......|+|++||||.+++++|++++||+||||++
T Consensus 321 ~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~ 400 (494)
T d1bxsa_ 321 KKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQ 400 (494)
T ss_dssp TCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEE
T ss_pred hheeeeccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEE
Confidence 99999999999999999999999999999999999999999999987667899999999999999999999999999999
Q ss_pred EEEEec
Q 015020 408 LMKFKI 413 (414)
Q Consensus 408 v~~~~~ 413 (414)
|++|++
T Consensus 401 v~~~~~ 406 (494)
T d1bxsa_ 401 IMKFKS 406 (494)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999975
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=6.8e-89 Score=691.16 Aligned_cols=400 Identities=54% Similarity=0.882 Sum_probs=380.1
Q ss_pred cCCCCccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccC-CCCCCCHHHHHHHHHHH
Q 015020 14 FKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKF 92 (414)
Q Consensus 14 ~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~~L~~~ 92 (414)
.+.+.+.+.++||||+|+.+.++++++++||+||+++++++.++.+|+++||++|++||+.+ .|++++..+|.++|+++
T Consensus 6 ~~~p~~~~~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~ 85 (494)
T d1o04a_ 6 NQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRL 85 (494)
T ss_dssp CSSCCCCCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHH
T ss_pred CCCCccccCCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHH
Confidence 34566777899999999998888999999999999999999999999999999999999631 49999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchh
Q 015020 93 ADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFP 172 (414)
Q Consensus 93 a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P 172 (414)
++.|++++++|++++++|+|||..++...|+..+++.+++++.++.+..++..+...+...++.++|+|||++|+|||||
T Consensus 86 a~~l~~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P 165 (494)
T d1o04a_ 86 ADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFP 165 (494)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSH
T ss_pred HHHHHHhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEecccEEEEECCcccH
Confidence 99999999999999999999999998655999999999999999988877776666667788999999999999999999
Q ss_pred HHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHH
Q 015020 173 TTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252 (414)
Q Consensus 173 ~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~ 252 (414)
+...++++++||++||+||+|||+.+|.++.+|.+++.++|+|+|++|+|+|++.++++.|+.||+++.|+||||+.+|+
T Consensus 166 ~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~ 245 (494)
T d1o04a_ 166 LLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGR 245 (494)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhcccc
Q 015020 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (414)
Q Consensus 253 ~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (414)
.|++.++.+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|.+++.++++
T Consensus 246 ~i~~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~ 325 (494)
T d1o04a_ 246 VIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVV 325 (494)
T ss_dssp HHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCB
T ss_pred HHHHHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhheee
Confidence 99988765789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEe
Q 015020 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (414)
Q Consensus 333 g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (414)
|+|.++++++|||+++.+++++.++|++|+++||++++||....+.|+|++||||.+++++|++++||+||||++|++|+
T Consensus 326 g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~ 405 (494)
T d1o04a_ 326 GNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 405 (494)
T ss_dssp CCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred cCcccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeC
Confidence 99999999999999999999999999999999999999998776789999999999999999999999999999999997
Q ss_pred c
Q 015020 413 I 413 (414)
Q Consensus 413 ~ 413 (414)
+
T Consensus 406 ~ 406 (494)
T d1o04a_ 406 T 406 (494)
T ss_dssp C
T ss_pred C
Confidence 6
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=8.3e-86 Score=669.04 Aligned_cols=389 Identities=38% Similarity=0.691 Sum_probs=370.2
Q ss_pred cccceeEcCeEeeCCCCCeE-EeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015020 20 KFTKLFINGEFVDSVSGKTF-ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~-~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (414)
....+||||+|+.+.++.++ +++||+||+++++++.++.+|+++||++|++||+ .|++++..+|.++|+++++.|++
T Consensus 18 ~~~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~--~W~~~s~~eR~~iL~~~a~~L~~ 95 (503)
T d1a4sa_ 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRE 95 (503)
T ss_dssp CSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred cCCCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHH
Confidence 33458999999998776655 6999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHH
Q 015020 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (414)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (414)
|+++|++++++|+|||+.++.. |+..+++.+++++.+.++..+.......+...++.++|+|||++|+|||||+...++
T Consensus 96 ~~eela~~~~~etGkp~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~NfP~~~~~~ 174 (503)
T d1a4sa_ 96 RRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAW 174 (503)
T ss_dssp THHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred hHHHHHHHHHHhhhhcchhhhh-hhhhhhhcccccccccccccccccccCCCcccccccccceeeecccCCCChHHHHHH
Confidence 9999999999999999999997 999999999999999887766655555667789999999999999999999999999
Q ss_pred hHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHH
Q 015020 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (414)
Q Consensus 179 ~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (414)
++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+| +.++++.|++||+|+.|+||||+.+|+.|++.+
T Consensus 175 ~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~~a 253 (503)
T d1a4sa_ 175 KCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMS 253 (503)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999 568999999999999999999999999999999
Q ss_pred HhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCC
Q 015020 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (414)
Q Consensus 259 ~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~ 338 (414)
+ +++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++++|+++|.+.++++++|+|.++
T Consensus 254 a-~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~~ 332 (503)
T d1a4sa_ 254 A-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLT 332 (503)
T ss_dssp H-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred h-hcCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEeecccccc
Confidence 8 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc------CCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEe
Q 015020 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI------GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (414)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~------~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (414)
.+++||++++.+++++.+++++++++||++++||... ...|+|++||||.+++++|+++++|+||||++|++|+
T Consensus 333 ~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~ 412 (503)
T d1a4sa_ 333 ETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFD 412 (503)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred ccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEcC
Confidence 9999999999999999999999999999999999753 2468999999999999999999999999999999998
Q ss_pred c
Q 015020 413 I 413 (414)
Q Consensus 413 ~ 413 (414)
+
T Consensus 413 ~ 413 (503)
T d1a4sa_ 413 T 413 (503)
T ss_dssp C
T ss_pred C
Confidence 6
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.7e-84 Score=653.05 Aligned_cols=388 Identities=37% Similarity=0.620 Sum_probs=359.0
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 015020 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (414)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (414)
..++||||+|+.+ ++++++++||+||+++++++.++.+|+++|+++|++||+ .|+++|..+|.++|+++++.|++++
T Consensus 2 ~~~l~I~G~~v~~-~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~ 78 (474)
T d1wnda_ 2 QHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENG 78 (474)
T ss_dssp CCCEEETTEEECC-CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCccEECCeEeCC-CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCH
Confidence 3578999999976 568999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceee-ccCCccceeeecCCceEEEEcCCchhHHhhHHh
Q 015020 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (414)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (414)
++|++++++|+|||+.++...++..+...+++++...........+ ...+...+++++|+|||++|+|||||+...+++
T Consensus 79 ~ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~ 158 (474)
T d1wnda_ 79 QVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK 158 (474)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEecccceEEEeecchHhhhhhcc
Confidence 9999999999999999997646666667667666655443322222 235567889999999999999999999999999
Q ss_pred HhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHH
Q 015020 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (414)
Q Consensus 180 l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (414)
+++||++||+||+|||+.+|+++.+++++++++ +|+|++|+|+|++.++++.|++||+|+.|.||||+.+|+.|++.++
T Consensus 159 ~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~~-lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~ 237 (474)
T d1wnda_ 159 LAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA 237 (474)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHHh-CCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhh
Confidence 999999999999999999999999999998765 9999999999988889999999999999999999999999999998
Q ss_pred hCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCC
Q 015020 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (414)
Q Consensus 260 ~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 339 (414)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|+|.+++
T Consensus 238 -~~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~ 316 (474)
T d1wnda_ 238 -SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDES 316 (474)
T ss_dssp -GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTT
T ss_pred -cCCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCE-EEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 340 VRQGPQVDKKQFDRILSYIEHGKREGAT-LLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~-v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++||++++.+.+++.+++++++++|+. ++.|+......|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 317 ~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~ 391 (474)
T d1wnda_ 317 TELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDN 391 (474)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred ceecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCC
Confidence 9999999999999999999999999984 5666666566899999999999999999999999999999999975
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1e-82 Score=648.98 Aligned_cols=387 Identities=32% Similarity=0.551 Sum_probs=360.4
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCC-CCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (414)
+.+++||||+|+.+ ++.+.++||. ||+++++++.++.+|+++||++|++||+ .|+++|..+|.++|+++++.|++
T Consensus 36 ~~~~l~I~G~~v~s--~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~s~~~R~~iL~~~a~~l~~ 111 (516)
T d1uzba_ 36 RHYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRR 111 (516)
T ss_dssp EEECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEcCEEECC--CCCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHH
Confidence 55789999999974 4678999985 7999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceee--ccCCccceeeecCCceEEEEcCCchhHHhh
Q 015020 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK--MSRALQGYTLREPIGVVGHIIPWNFPTTMF 176 (414)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 176 (414)
++++|++++++|+|||..+++. |+..+++.+++++..+....+.... ...+...+..++|+|||++|+|||||+...
T Consensus 112 ~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~ 190 (516)
T d1uzba_ 112 RKRELEATLVYEVGKNWVEASA-DVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIF 190 (516)
T ss_dssp THHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHHHhCCCccccch-hHHHHHHHHHHHHHHHHhhhhcccccccccccceeEEeeccCccccccccccccccc
Confidence 9999999999999999999986 9999999999999988766543322 224556788899999999999999999999
Q ss_pred HHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHH
Q 015020 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (414)
Q Consensus 177 ~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (414)
++++++||++||+||+|||+.+|+++.++.+++.++|+|+|++|+++|++.++++.|++||+|+.|.||||+.+|+.|++
T Consensus 191 ~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~ 270 (516)
T d1uzba_ 191 TGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYE 270 (516)
T ss_dssp HHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred cccccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHHh-----CCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccc
Q 015020 257 AAAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (414)
Q Consensus 257 ~~~~-----~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~ 331 (414)
.++. .++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|++++.+++++++
T Consensus 271 ~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~ 350 (516)
T d1uzba_ 271 AAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLS 350 (516)
T ss_dssp HHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCC
T ss_pred HHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhcc
Confidence 8762 46799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEE
Q 015020 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411 (414)
Q Consensus 332 ~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~ 411 (414)
+| |.++++++||+++..+++++.++|++++++|+.+ +||...+..|+|++||||.+++++|++++||+||||++|++|
T Consensus 351 ~g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~ 428 (516)
T d1uzba_ 351 VG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRV 428 (516)
T ss_dssp BS-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEE
T ss_pred cC-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEEe
Confidence 99 5688899999999999999999999999999755 566665567999999999999999999999999999999999
Q ss_pred ec
Q 015020 412 KI 413 (414)
Q Consensus 412 ~~ 413 (414)
++
T Consensus 429 ~d 430 (516)
T d1uzba_ 429 KD 430 (516)
T ss_dssp SS
T ss_pred CC
Confidence 75
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=2.9e-76 Score=599.62 Aligned_cols=386 Identities=28% Similarity=0.470 Sum_probs=353.6
Q ss_pred CccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 015020 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (414)
Q Consensus 18 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (414)
.++.+++||||+|+. ++++++++||+||+.+++++.++.+|+++|++.|+++++. .|+++|..+|+++|+++++.|+
T Consensus 13 ~~~~~~~~I~G~~~~--sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~-~w~~~~~~~R~~iL~~~a~~l~ 89 (499)
T d1ky8a_ 13 GVPVYPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIE 89 (499)
T ss_dssp TEEEECEECSSSEEC--CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHHSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEECCeECC--CCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchh-hhhcCCHHHHHHHHHHHHHHHH
Confidence 356789999999985 5689999999999999999999999999999999877651 4999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-----cCCccceeeecCCceEEEEcCCchh
Q 015020 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQGYTLREPIGVVGHIIPWNFP 172 (414)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~P~Gvv~~i~p~n~P 172 (414)
+++++|++++++|+|||..+++. |+..+++.+++++..+++..+..... ..+...++.++|+|||++|+|||||
T Consensus 90 ~~~~~la~~~~~etGk~~~~a~~-Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P 168 (499)
T d1ky8a_ 90 RNLDVFAEVLVMNAGKPKSAAVG-EVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYP 168 (499)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSH
T ss_pred HhHHHHHHHHHHHhCCCHHHHhh-hhhcccccccchhhhhhhhhhceeccccccccccccceeeeecccccccccccccc
Confidence 99999999999999999999986 99999999999998887765543321 1345678899999999999999999
Q ss_pred HHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHH
Q 015020 173 TTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252 (414)
Q Consensus 173 ~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~ 252 (414)
+.+.++++++||++||+||+|||+.+|.++..+.+++.++|+|+++++++.+++ +.+..|+.|++++.+.||||+.+++
T Consensus 169 ~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~-~~~~~l~~~~~i~~v~ftGs~~~g~ 247 (499)
T d1ky8a_ 169 LFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGE 247 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCG-GGGHHHHHCTTCCEEEEESCHHHHH
T ss_pred chhhhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCCh-HHHHHHhhccceeEEEeecccccce
Confidence 999999999999999999999999999999999999999999999999999966 5678899999999999999999999
Q ss_pred HHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhcccc
Q 015020 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (414)
Q Consensus 253 ~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (414)
.+++.++ .+|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++
T Consensus 248 ~i~~~~~---~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~ 324 (499)
T d1ky8a_ 248 RVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRV 324 (499)
T ss_dssp HHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCB
T ss_pred EEeeccc---ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCcc
Confidence 9998765 4899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEE---eeCCCCCcccccccccceeeEE
Q 015020 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF---TNVTEDMLIAKNEIFGPVMALM 409 (414)
Q Consensus 333 g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl---~~~~~~~~i~~~E~fgPv~~v~ 409 (414)
|+|.++++++||+++..++++++++|++|+++||+++.||... ...++.++++ .++.+||++++||+||||++|+
T Consensus 325 G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~ 402 (499)
T d1ky8a_ 325 GDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRL--GPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAV 402 (499)
T ss_dssp SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEE--ETTEECCEEEECCHHHHTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeeccc--cccccccccccccccCCCCChhhhccccCceEEEE
Confidence 9999999999999999999999999999999999999999864 2334444444 3456799999999999999999
Q ss_pred EEec
Q 015020 410 KFKI 413 (414)
Q Consensus 410 ~~~~ 413 (414)
+|++
T Consensus 403 ~~~~ 406 (499)
T d1ky8a_ 403 EVKD 406 (499)
T ss_dssp EESS
T ss_pred EcCC
Confidence 9975
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=1.5e-73 Score=577.22 Aligned_cols=382 Identities=32% Similarity=0.514 Sum_probs=354.0
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
+.+++||||+|+.+ +.+++++||+||+++++++.++.+|+++||++|++|++ .|+++|.++|.++|+++++.|+++
T Consensus 2 k~~~n~I~G~~~~~--~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~--~W~~~s~~~R~~iL~~~a~~L~~~ 77 (474)
T d1euha_ 2 KQYKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRD 77 (474)
T ss_dssp CBCCEEETTEEECC--SSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccccceecCeecCC--CCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH--HHhhCCHHHHHHHHHHHHHHHHHh
Confidence 56799999999864 47899999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceee------ccCCccceeeecCCceEEEEcCCchhH
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK------MSRALQGYTLREPIGVVGHIIPWNFPT 173 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~~~P~Gvv~~i~p~n~P~ 173 (414)
+++|++++++|+||+..+++. |+...+..++++............. ...+...+++++|+|||++|+|||||+
T Consensus 78 ~~~la~~~~~e~Gk~~~~a~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~ 156 (474)
T d1euha_ 78 KEKIGAILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV 156 (474)
T ss_dssp HHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTT
T ss_pred HHHHHHHHHHHhCCCcchhcc-ccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccc
Confidence 999999999999999999987 9999999999988776543222111 123445678899999999999999999
Q ss_pred HhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHH
Q 015020 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (414)
Q Consensus 174 ~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~ 253 (414)
...+..+++||++||+||+|||+.+|.++.++.++|.++|+|+|++|+++|++.++++.|..||+++.|.||||+.+++.
T Consensus 157 ~~~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~ 236 (474)
T d1euha_ 157 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 236 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred hhhhhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccc
Confidence 99999999999999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred HHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccC
Q 015020 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (414)
Q Consensus 254 i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g 333 (414)
+++.++ .+|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++++|++.++++...++.|
T Consensus 237 i~~~a~---~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~ 313 (474)
T d1euha_ 237 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIG 313 (474)
T ss_dssp HHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBS
T ss_pred hhhhcc---cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhcccc
Confidence 998765 68999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 334 ~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++.+. .+++|++...+.+++.+.+..+...|+..+.++. ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 314 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~ 389 (474)
T d1euha_ 314 NPEDD-ADITPLIDTKSADYVEGLINDANDKGATALTEIK---REGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTS 389 (474)
T ss_dssp CGGGT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCC---EETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESC
T ss_pred Ccccc-cccccccchHHHHHHHHHHHhhhcccccccccCC---CCCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCC
Confidence 98765 5689999999999999999999999988876554 3699999999999999999999999999999999986
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=9.2e-69 Score=543.69 Aligned_cols=361 Identities=21% Similarity=0.289 Sum_probs=310.4
Q ss_pred CCeEEeecCCCCceEE-EEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCc
Q 015020 36 GKTFETIDPRTGEAIA-RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKL 114 (414)
Q Consensus 36 ~~~~~v~~P~tg~~i~-~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~ 114 (414)
+++|+++||+|||.|+ +++.++.+|+++||++|++||+ .|+++|..+|.++|+++++.|++|+++|++++++|+|||
T Consensus 2 ~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp 79 (504)
T d1ez0a_ 2 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALP 79 (504)
T ss_dssp CCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred CCeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999997 7999999999999999999999 899999999999999999999999999999999999999
Q ss_pred hhhhhhCcHHHHHHHHHHHHHHhhhhcCceee---------ccCCccceeeecCCceEEEEcCCchhHHhh--HHhHhhH
Q 015020 115 HSWAKMGDIPGAANTLRYYAGAADKIHGEVLK---------MSRALQGYTLREPIGVVGHIIPWNFPTTMF--FMKVSPA 183 (414)
Q Consensus 115 ~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~l~~A 183 (414)
..+++. |+..+++.++||+++.++....... ...+...+..++|+|||++|+|||||+... .+++++|
T Consensus 80 ~~~a~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~A 158 (504)
T d1ez0a_ 80 EVRLTG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASA 158 (504)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHH
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHH
Confidence 999986 9999999999999988764332211 112345677889999999999999999755 4689999
Q ss_pred hhcCCEEEEecCCCChHHHHHHHH----HHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHH
Q 015020 184 LAAGCTMIVKPAEQTPLIALYFAH----LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (414)
Q Consensus 184 LaaGN~vvlkps~~~~~~~~~l~~----~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (414)
|++||+||+|||+.+|.++.++.+ ++.++|+|+|++|+|+|++.++++.|++||+|+.|+||||+.+|+.|++.++
T Consensus 159 LaaGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa 238 (504)
T d1ez0a_ 159 LAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAH 238 (504)
T ss_dssp HHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHhccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhh
Confidence 999999999999999998877654 4567799999999999988889999999999999999999999999999998
Q ss_pred hCCCccee--eecCCCCceEEcCCCCHHHHH--HHHHHHHhccCCCccccCCceEeecchH-HHHHHHHHHHHhccccCC
Q 015020 260 TSNLKPVS--LELGGKSPLLIFDDVDVNTAA--DMALLGILFNKGEICVASSRVYVQEGIY-DEFEKKLVEKAKAWVVGD 334 (414)
Q Consensus 260 ~~~~~~~~--~elgG~~~~iV~~dadl~~a~--~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~ 334 (414)
++++|+. +|+|||||+||++|||++.|+ +.++.++|.|+||.|++++|+||+++.+ +.|++.+.+.++. +
T Consensus 239 -~~~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~---~- 313 (504)
T d1ez0a_ 239 -ERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ---Q- 313 (504)
T ss_dssp -HSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH---C-
T ss_pred -cccccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhh---c-
Confidence 7777754 599999999999999999874 4789999999999999999999887755 4677777666553 2
Q ss_pred CCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEe---eCCCCCcccccccccceeeEEEE
Q 015020 335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT---NVTEDMLIAKNEIFGPVMALMKF 411 (414)
Q Consensus 335 p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~---~~~~~~~i~~~E~fgPv~~v~~~ 411 (414)
++++.+||+++..+++++ ++.+...|+.++.||.. +.+..|+++. ++..++++++||+||||++|++|
T Consensus 314 --~~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~ 384 (504)
T d1ez0a_ 314 --SPSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVC 384 (504)
T ss_dssp --CCBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCC----TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEE
T ss_pred --ccccccccchhhhhhhhh---hhhhhhhhhhccccccc----ccccCCccccccccccccchhhcccccCCeeeeeec
Confidence 457889999998887665 66777889999888764 3344555443 33457899999999999999999
Q ss_pred ec
Q 015020 412 KI 413 (414)
Q Consensus 412 ~~ 413 (414)
++
T Consensus 385 ~~ 386 (504)
T d1ez0a_ 385 EN 386 (504)
T ss_dssp SS
T ss_pred CC
Confidence 75
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2e-67 Score=526.80 Aligned_cols=340 Identities=28% Similarity=0.411 Sum_probs=305.6
Q ss_pred HHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhh
Q 015020 61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI 140 (414)
Q Consensus 61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~ 140 (414)
+++||++||+||+ .|+.+|..+|.++|++++++|++|+++|++++++|+||+..++...|+..+++.++++++.+...
T Consensus 2 v~~av~~Ar~Af~--~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~ 79 (446)
T d1ad3a_ 2 ISDTVKRAREAFN--SGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDW 79 (446)
T ss_dssp HHHHHHHHHHHHH--TTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--hhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6899999999999 99999999999999999999999999999999999999999987559999999999888766544
Q ss_pred cCce-ee---ccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCC
Q 015020 141 HGEV-LK---MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 216 (414)
Q Consensus 141 ~~~~-~~---~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~ 216 (414)
.... .. ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++++++.+. +|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~-~~~ 158 (446)
T d1ad3a_ 80 AEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQ 158 (446)
T ss_dssp HSCEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHH-SCT
T ss_pred hcccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceecccccccccccccc-ccc
Confidence 3221 11 123455688999999999999999999999999999999999999999999999999999998775 999
Q ss_pred CcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHh
Q 015020 217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 296 (414)
Q Consensus 217 g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~ 296 (414)
++++++.+.+... ..+ .++.++.|.||||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 159 ~~~~~~~~~~~~~-~~~-~~~~~~~v~fTGs~~~G~~i~~~aa-~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~ 235 (446)
T d1ad3a_ 159 NLYLVVKGGVPET-TEL-LKERFDHIMYTGSTAVGKIVMAAAA-KHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF 235 (446)
T ss_dssp TTEEECCCSHHHH-HHH-TTSCCSEEEEESCHHHHHHHHHHHH-TTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHH
T ss_pred cccccccccchhh-hhh-cccccCceEEECcHHHHHHHHHHHH-hcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHh
Confidence 9999999966544 334 3668999999999999999999999 889999999999999999999999999999999999
Q ss_pred ccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC
Q 015020 297 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376 (414)
Q Consensus 297 ~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~ 376 (414)
.|+||.|++++|||||++++|+|+++|.+.++.+ +|+|.++++++||++++.+++++.++++++ +...|+.. .
T Consensus 236 ~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a-----~~~~g~~~-~ 308 (446)
T d1ad3a_ 236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDNQ-----KVAHGGTW-D 308 (446)
T ss_dssp TTTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTTS-----CEEECCCE-E
T ss_pred cCCCCccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccch-----hcccceee-c
Confidence 9999999999999999999999999999999887 899999999999999999999998887654 44444443 3
Q ss_pred CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 377 ~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
..++|+.|||+.+++++|++++||+||||++|++|++
T Consensus 309 ~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~ 345 (446)
T d1ad3a_ 309 QSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRS 345 (446)
T ss_dssp TTTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSS
T ss_pred CCCCCcCCEEEECCCCCCHHHhCcccCcceEEEEecc
Confidence 5678999999999999999999999999999999985
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=3.8e-49 Score=391.08 Aligned_cols=269 Identities=14% Similarity=0.123 Sum_probs=222.0
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCc------------HHHH
Q 015020 59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGD------------IPGA 126 (414)
Q Consensus 59 ~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~e------------v~~~ 126 (414)
+|+.+++++|++||+ .|+++|..+|.++|++++++|++|+++|++++++|+||+..++.. | +..+
T Consensus 1 ee~~~a~~~A~~Af~--~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~-e~~~~rl~~~~~~i~~~ 77 (414)
T d1o20a_ 1 DELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVK-ESLVDRLALNDKRIDEM 77 (414)
T ss_dssp CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCC-HHHHHHHCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhcccc-HHHHHHHhccHHHHHHH
Confidence 478899999999999 999999999999999999999999999999999999999988754 4 5567
Q ss_pred HHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHH
Q 015020 127 ANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 206 (414)
Q Consensus 127 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~ 206 (414)
++.+++++.......+...+........+.++|+|+++++.|||||+.+.++++++||++||+||+|||+.+|.++.+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~ 157 (414)
T d1o20a_ 78 IKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIV 157 (414)
T ss_dssp HHHHHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHH
T ss_pred HHHHHHHHHhhhhccccccccccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhh
Confidence 77788887766555544444344456777889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHc----CCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCC-ceEEcCC
Q 015020 207 HLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS-PLLIFDD 281 (414)
Q Consensus 207 ~~l~~a----glP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~-~~iV~~d 281 (414)
+++.++ |+|.++++.+.+.+.+....+..+ +.+.|+||+..+..+.+.++ ++.+++++|+||+| ++||++|
T Consensus 158 ~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~~a~-~~~~~~~le~gGgn~~viv~~d 233 (414)
T d1o20a_ 158 SAIREALKETEIPESSVEFIENTDRSLVLEMIRL---REYLSLVIPRGGYGLISFVR-DNATVPVLETGVGNCHIFVDES 233 (414)
T ss_dssp HHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTC---TTTCSEEEECSCHHHHHHHH-HHCSSCBCCCCCCCEEEEECTT
T ss_pred hHHHhhhhhccccccccccccccchhhhhhcccc---cccCeEEEcccHHHHHHHhh-hccccceecccCCCCCeecccc
Confidence 998876 445555777766554555555443 34444455555556666666 55688888888766 5778899
Q ss_pred CCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCC
Q 015020 282 VDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (414)
Q Consensus 282 adl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 335 (414)
||++.|++.++.++|.| ||.|++++|+|||+++||+|+++|.+...+..++.+
T Consensus 234 Ad~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~ 286 (414)
T d1o20a_ 234 ADLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVR 286 (414)
T ss_dssp SCHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred cchhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCccc
Confidence 99999999999999987 999999999999999999999999999988765543
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.2e-39 Score=319.17 Aligned_cols=258 Identities=19% Similarity=0.205 Sum_probs=204.0
Q ss_pred HHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHhCCchhhh-h-----hCcHHHHH
Q 015020 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLE------ALDAGKLHSWA-K-----MGDIPGAA 127 (414)
Q Consensus 60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~------~~e~Gk~~~~a-~-----~~ev~~~~ 127 (414)
.+++.++.|++|++ .|+.+|.++|.++|+++++.|++|+++|+++. +++.|++.... | ..-+...+
T Consensus 4 ~~e~~~~~Ak~A~~--~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~ 81 (436)
T d1vlua_ 4 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 81 (436)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred HHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHH
Confidence 46788999999999 99999999999999999999999999998853 44556553321 0 00145556
Q ss_pred HHHHHHHHHhhhhcCcee---eccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHH
Q 015020 128 NTLRYYAGAADKIHGEVL---KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 204 (414)
Q Consensus 128 ~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~ 204 (414)
+.++..+...+.. +... ....+...+..+.|+||+++| |+++| ..+....+.||++||+||+||++.++.++..
T Consensus 82 ~~l~~i~~~~dpv-g~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~ 158 (436)
T d1vlua_ 82 QGIKDVAELEDPV-GKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFRE 158 (436)
T ss_dssp HHHHHHHHSCCSS-SCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHHhccccc-eeEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHH
Confidence 6666666544332 1111 123556677889999999998 55667 5667788999999999999999999999988
Q ss_pred HHHHH--------HHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCce
Q 015020 205 FAHLA--------KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL 276 (414)
Q Consensus 205 l~~~l--------~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~ 276 (414)
+.+++ .++|+|+++++++++. .++++.|..|++||.|.||||...++.+.+.+ .+|++.++||++|+
T Consensus 159 l~~~~~~al~~a~~~aGlP~~~i~~v~~~-~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~----~~pvi~~~~G~~~~ 233 (436)
T d1vlua_ 159 MAKIVNDTIAQFQSETGVPVGSVQLIETR-QDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSI 233 (436)
T ss_dssp HHHHHHHHHHHHHHHHCCCTTSEEECCCC---CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEE
T ss_pred HHHHHHHhhhhhccccCCCCceEEEecch-hHHHHHhccCCCCceEEEecCCceeeeeeccc----cceEEEecCCccce
Confidence 87766 4679999999999884 46789999999999999999999988876543 36999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHh
Q 015020 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 328 (414)
Q Consensus 277 iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~ 328 (414)
||++|||++.|++.++.++|.+.|| |++.++++||+++++.|...+....+
T Consensus 234 ~Vd~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~ 284 (436)
T d1vlua_ 234 YLDEDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLE 284 (436)
T ss_dssp EECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHH
T ss_pred eecccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHHh
Confidence 9999999999999999999999996 99999999999999888665544443
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=92.41 E-value=3.9 Score=37.31 Aligned_cols=231 Identities=16% Similarity=0.139 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhC-Cch---hhhhhCcHHHHHH--------HHHHHHHHhhhhc------Cce
Q 015020 83 AERRGIMLKFADLIEEHAEVLAVLEALDAG-KLH---SWAKMGDIPGAAN--------TLRYYAGAADKIH------GEV 144 (414)
Q Consensus 83 ~~R~~~L~~~a~~l~~~~~~l~~~~~~e~G-k~~---~~a~~~ev~~~~~--------~l~~~~~~~~~~~------~~~ 144 (414)
.+-.+..+.+.+.++++.|.-+.-.++... ... ..... |+..+.+ .++......+.++ ...
T Consensus 27 ~~v~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~-Ei~~A~~~l~~el~~AI~~A~~rI~~FH~~Q~~~~~~ 105 (431)
T d1k75a_ 27 ESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAE-EIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVD 105 (431)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCCHH-HHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCccccccCHH-HHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhcCCCce
Confidence 344455666677777777776665665543 211 11111 3333322 2222222222221 111
Q ss_pred eeccCCccceeeecCCceEEEEcCCc---hhHHhhHHhHhhHhhcCCEE--EEecCCCChHHHHHHHHHHHHcCCCCCcE
Q 015020 145 LKMSRALQGYTLREPIGVVGHIIPWN---FPTTMFFMKVSPALAAGCTM--IVKPAEQTPLIALYFAHLAKLAGVPDGVL 219 (414)
Q Consensus 145 ~~~~~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~l~~ALaaGN~v--vlkps~~~~~~~~~l~~~l~~aglP~g~~ 219 (414)
.....|.....++.|+--|++..|+- ||-.. +...+||-.+|+.= +.-|+...|.+ .-+...+|+.
T Consensus 106 ~e~~~Gv~~g~~~~PI~~VGlYVPGG~A~ypSsv-LM~aiPAkvAGV~~Ivv~tPp~~~~~~----l~aa~~~Gv~---- 176 (431)
T d1k75a_ 106 VETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTV-LMLATPASIAGCKKVVLCSPPPIADEI----LYAAQLCGVQ---- 176 (431)
T ss_dssp EEEETTEEEEEEEEECSEEEEECCCSSSCCHHHH-HHHHHHHHHHTCSEEEEEECSSCCHHH----HHHHHHTTCC----
T ss_pred eeccCCceeeeeeeehhhheeeccCCCccchHHH-HHHHHHHHhcCCCceeEEeCCCCcchH----HHHHHHcCcc----
Confidence 22335666778899999999999955 55544 44578999999764 45566555532 2233455643
Q ss_pred EEEeCCchhHHHHhhh----CCCcCEEEEecCHHHHHHHHHHHHhCCCcceee-ecCCCC--ceEEcCCCCHHHHHHHHH
Q 015020 220 NVVPGFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL-ELGGKS--PLLIFDDVDVNTAADMAL 292 (414)
Q Consensus 220 ~~v~g~~~~~~~~l~~----~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~-elgG~~--~~iV~~dadl~~a~~~i~ 292 (414)
.+..-.|.+.-.+|.- -|+||.|+=.|+.-+...=....+ ... .+-. -+-|.+ -+|.++++|.+.++..++
T Consensus 177 ~iy~~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g-~~~-~vgID~~aGPSEv~viAD~~a~p~~iAaDll 254 (431)
T d1k75a_ 177 DVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQ-RLD-GAAIDMPAGPSEVLVIADSGATPDFVASDLL 254 (431)
T ss_dssp EEEECCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHH-STT-SCEESCCCCCCEEEEEECTTSCHHHHHHHHH
T ss_pred ceEecCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcc-cCC-ccccccccCCceEEEEecCCCCHHHHHHHHH
Confidence 3333335554455543 578999999999877554222222 110 1111 123333 244556789999999998
Q ss_pred HHHhccCCCccccCCceEeec--chHHHHHHHHHHHHhcc
Q 015020 293 LGILFNKGEICVASSRVYVQE--GIYDEFEKKLVEKAKAW 330 (414)
Q Consensus 293 ~~~~~~~GQ~C~a~~~v~V~~--~i~~~f~~~l~~~~~~~ 330 (414)
.-+=+...-. .++|.. ++.+++.+.+.+.+..+
T Consensus 255 aQAEH~~~a~-----~ilvt~~~~l~~~v~~~i~~~l~~l 289 (431)
T d1k75a_ 255 SQAEHGPDSQ-----VILLTPAADMARRVAEAVERQLAEL 289 (431)
T ss_dssp HHHTTCTTCE-----EEEEESCHHHHHHHHHHHHHHHHTC
T ss_pred hccCCcccce-----eEEEeccHHHHHHHHHHHHHHhhhc
Confidence 8887765533 356644 45677777777766554
|