Citrus Sinensis ID: 015032

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410----
Protein Sequence
MGKHRSWFGWVKKLFVSEARTKAEKKSKRWKWAFGRLKFRQYPALTAPQISLNEATEEQRKHALNVAMATAVAAEAAVAAAHAAAEVVRLIGTSKSYHHLTARDRNLAAIKIQSAFRAHLARKALRALKGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKRDAVCKYSEHKKCIRSKEELEEKEIKPEFIDQRSWDYSILSKEDMEAIWLRKQEAAIKRERMMKYSYSHRESRNVHRLEESVPHKENGKESFTLEKGSNTGAYRRKELEMLNSSAHENLVPSEIYIPRHVRLRHMQKPESQDCVSSPISFPRRSFSRTKQNAFGDNDSVPNSPVFPTYMAVTESAKAKARSMSTPKQRVAFLDSCFDHSMPYRNEISLRSSYNGESVTRDAKNGNFQQLSVIMNSLQ
Secondary Structure (PSIPRED)
cccccccHHHHHHcccccccccHHHHHccccccccccccccccccccccccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHccccccccHHHHHHHccccccccccccccccccccccccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mgkhrswfgwVKKLFVSEARTKAEKKSKRWKWAFGRlkfrqypaltapqislnEATEEQRKHALNVAMATAVAAEAAVAAAHAAAEVVRLIGTSKSYHHLTARDRNLAAIKIQSAFRAHLARKALRALKGLVKLQAIVRGRAVRRQATATlkclpsngekqskVQEKRDAVCKysehkkcirskeeleekeikpefidqrswdysilsKEDMEAIWLRKQEAAIKRERMMKYSYshresrnvhrleesvphkengkesftlekgsntgayRRKELEMLNSsahenlvpseiyiprhvrlrhmqkpesqdcvsspisfprrsfsrtkqnafgdndsvpnspvfpTYMAVTESAKakarsmstpkQRVAFLDscfdhsmpyrneislrssyngesvtrdakngnFQQLSVIMNSLQ
Flexible Loop (DISEMBL)
mgkhrswfgwvkklfvseartkaekkskrwkwAFGRLKFRQYPALTAPQISLNEATEEQRKHALNVAMATAVAAEAAVAAAHAAAEVVRLIGTSKSYHHLTARDRNLAAIKIQSAFRAHLARKALRALKGLVKLQAIVRGRAVRRQAtatlkclpsngekqskvqekrdavckysehkkcirskeeleekeikpefidqrswdysiLSKEDMEAIWLRKQEAAIKRERMMKYsyshresrnvhrleesvphkengkesftlekgsntgAYRRKELEMLnssahenlvpsEIYIPRHVRLRHMQkpesqdcvsspisfprRSFSrtkqnafgdndsvpnspVFPTYMAVTESAKakarsmstpkQRVAFLDSCFDHSMPYRNEISLRSSYNGESVTrdakngnfqqLSVIMNSLQ
Low Complexity Region (SEG)
MGKHRSWFGWVKKLFVSEARTKAEKKSKRWKWAFGRLKFRQYPALTAPQISLNEATEEQRKHALNvamatavaaeaavaaahaaaevvRLIGTSKSYHHLTARDRNLAAIKIQSafrahlarkalralkglvklQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKRDAVCKYSEHKKCIRSkeeleekeikpeFIDQRSWDYSILSKEDMEAIWLRKQEAAIKRERMMKYSYSHRESRNVHRLEESVPHKENGKESFTLEKGSNTGAYRRKELEMLNSSAHENLVPSEIYIPRHVRLRHMQKPESQDCVsspisfprrsfsrTKQNAFGDNDSVPNSPVFPTYMAVTESAKAKARSMSTPKQRVAFLDSCFDHSMPYRNEISLRSSYNGESVTRDAKNGNFQQLSVIMNSLQ
Disordered region (IsUnstruct)
*****SWFGWVKKLFVSEARTKAEKKSKRWKWAFGRLKFRQYPALTAPQISL********KHALNVAMATAVAAEAAVAAAHAAAEVVRLIGTSKSYHHLTARDRNLAAIKIQSAFRAHLARKALRALKGLVKLQAIVRGRAVRRQATATLKC******************************************FIDQRSWDYSILSKEDMEAIWLRKQEA*******************************************************************EIYIPRHV********************************************************************VAFLDSCFDH***************************************
Disordered Region (DISOPRED)
MGKHRSWFG*********************************************************************AA*************************NLAAIKIQSAFRAHLARKALRALKGLVKLQAIV**********ATLKCLPSNGE***************************************************************************************************************************************************************************************************************************************************************
Disordered Region (DISEMBL)
MGKHRSWFGWVKKLFVSE**********RWKWAFGRLKFRQYPALTAPQISLNEATEEQRKHALNVAMATAVAAEAAVAAAHAAAEVVRLIGTSKSYHHLTARDRNLAAIKIQSAFRAHLARKALRALKGLVKLQAIVRGRAVRRQATATLKCLPS********************HKKCIRSKEELEEKEIKPEFIDQRSWDYSILSKEDMEAIWLRKQEAAIKRERMMKYSYS*********************ESFTLEKGSNTGAYRRKELEMLNSSAHENLVPSEIYIPRHVRLRHM***********PISFPRRSFSRTKQNAFGDNDSVPNSPVFPTYMAVT**************QRVAFLDSCFDHSMPYRNEISLRSSYNGESVTRDAKNGNFQQLSVIMNSLQ
Disordered Region (DISPRO)
******************************************************************AMAT*****************************LTARDRNLAAIKIQSAFRAHLARKALRALKGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKRDAVCKYSEHKKCIRSKEELEEKEIKPEF**QRSWDYSILSKEDMEAIWLRKQEAAIKRERMMKYSYSHRESRN************NGKESFTLEKGSNTGAY************************************************************************************************************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGKHRSWFGWVKKLFVSEARTKAEKKSKRWKWAFGRLKFRQYPALTAPQISLNEATEEQRKHALNVAMATAVAAEAAVAAAHAAAEVVRLIGTSKSYHHLTARDRNLAAIKIQSAFRAHLARKALRALKGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKRDAVCKYSEHKKCIRSKEELEEKEIKPEFIDQRSWDYSILSKEDMEAIWLRKQEAAIKRERMMKYSYSHRESRNVHRLEESVPHKENGKESFTLEKGSNTGAYRRKELEMLNSSAHENLVPSEIYIPRHVRLRHMQKPESQDCVSSPISFPRRSFSRTKQNAFGDNDSVPNSPVFPTYMAVTESAKAKARSMSTPKQRVAFLDSCFDHSMPYRNEISLRSSYNGESVTRDAKNGNFQQLSVIMNSLQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	414	2.2.26 [Sep-21-2011]
Q8LPG9	668	Protein IQ-DOMAIN 14 OS=A	no	no	0.577	0.357	0.325	4e-23
Q9SF32	454	Protein IQ-DOMAIN 1 OS=Ar	no	no	0.442	0.403	0.319	4e-16
Q8L4D8	587	Protein IQ-DOMAIN 31 OS=A	no	no	0.103	0.073	0.595	2e-09
Q9FXI5	794	Protein IQ-DOMAIN 32 OS=A	no	no	0.108	0.056	0.488	0.0002

>sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1

 Score =  109 bits (272), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 141/286 (49%), Gaps = 47/286 (16%)

Query: 108 AAIKIQSAFRAHLARKALRALKGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEK 167
           +A KIQ AFR ++ARK+ RALKGLV+LQ +VRG +V+RQ    +K +      QS++Q +
Sbjct: 324 SATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQSQIQSR 383

Query: 168 RDAVCKYSEHKKCIRSKEELEEKEIK--PEFIDQRSWDYSILSKEDMEAIWLRKQEAAIK 225
           R          K + ++ ++E+ E K         +WD S+L+KE+ ++   RK +A IK
Sbjct: 384 R---------IKMLENQAQVEKDEAKWAASEAGNDNWDDSVLTKEERDSRSQRKTDAIIK 434

Query: 226 RERMMKYSYSHRESRNVHRLEESVPHKENGKESF-----------TLEKGSNTGAYRRKE 274
           RER M Y+YS        +L ++ P       SF            L   + + +  +++
Sbjct: 435 RERSMAYAYS-------RKLWKNSPKSTQDNRSFPQWWNWVDRQNPLASPAPSYSQPQRD 487

Query: 275 LEMLNSSAHENLVPSEIYIP---RHVRLRH---MQKPESQDCV----SSPISFPRRSFSR 324
             +  S     L PS +       H+RL +      P S        S PI      +SR
Sbjct: 488 FRLTPS----RLCPSPLSQSSKQHHIRLDNHFDTSTPRSSRSTFHTPSRPIHTGTSRYSR 543

Query: 325 TK----QNAFGDNDSVPNSPVFPTYMAVTESAKAKARSMSTPKQRV 366
            +     + F D+DS+ + P FP+YMA T SAKAK R  S PK+RV
Sbjct: 544 GRLRGQDSPFKDDDSLTSCPPFPSYMAPTVSAKAKVRPNSNPKERV 589

May be involved in cooperative interactions with calmodulins or calmodulin-like proteins. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1

 Score = 86.3 bits (212), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 111/216 (51%), Gaps = 33/216 (15%)

Query: 42  YPALTA------PQ--ISLNEATEEQRKH---------ALNVAMATAVAAEAAVAAAHAA 84
           YP L A      PQ  + ++E   EQ+K+            VA     +  ++  + H A
Sbjct: 36  YPVLIATSRSSSPQFEVRVDEVNYEQKKNLYPPSSDSVTATVAHVLVDSPPSSPESVHQA 95

Query: 85  AEVVRLIGTSKSYHHLTARDRNLAAIKIQSAFRAHLARKALRALKGLVKLQAIVRGRAVR 144
             V R  G SK            AAI IQS FR HLAR+  + ++G  +L+ ++ G  V+
Sbjct: 96  IVVNRFAGKSK---------EEAAAILIQSTFRGHLARRESQVMRGQERLKLLMEGSVVQ 146

Query: 145 RQATATLKCLPSNGEKQSKVQEKRDAVCKYSEHKKCIRSKEELEE--KEIKPEFIDQRSW 202
           RQA  TLKC+ +    QS+++ +R    + SE  +  R K+ L++  KE+     +  +W
Sbjct: 147 RQAAITLKCMQTLSRVQSQIRSRR---IRMSEENQA-RHKQLLQKHAKELG-GLKNGGNW 201

Query: 203 DYSILSKEDMEAIWLRKQEAAIKRERMMKYSYSHRE 238
           +YS  SKE +EA  L K EA ++RER + Y+++H++
Sbjct: 202 NYSNQSKEQVEAGMLHKYEATMRRERALAYAFTHQQ 237

Modulates expression of glucosinolate pathway genes. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1

 Score = 64.3 bits (155), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 38/47 (80%)

Query: 105 RNLAAIKIQSAFRAHLARKALRALKGLVKLQAIVRGRAVRRQATATL 151
           R +AA  +Q+AFR +LAR+A  ALKG+++LQA++RG  VRRQA ATL
Sbjct: 112 REIAATSVQAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQAVATL 158

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FXI5|IQD32_ARATH Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=3

 Score = 47.4 bits (111), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 30/45 (66%)

Query: 110 IKIQSAFRAHLARKALRALKGLVKLQAIVRGRAVRRQATATLKCL 154
           + IQ+A R  LAR+ L   K ++KLQA VRG  VR QA  +L+C+
Sbjct: 219 VVIQAAVRGFLARRELLRSKKVIKLQAAVRGHLVRSQAMGSLRCV 263

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	414
224086926	431	predicted protein [Populus trichocarpa]	0.992	0.953	0.576	1e-115
225441365	422	PREDICTED: protein IQ-DOMAIN 14-like [Vi	0.990	0.971	0.570	1e-102
297739875	444	unnamed protein product [Vitis vinifera]	0.985	0.918	0.569	1e-101
297739877	425	unnamed protein product [Vitis vinifera]	0.997	0.971	0.535	1e-95
147819066	1497	hypothetical protein VITISV_016441 [Viti	0.932	0.257	0.562	3e-95
224137794	400	predicted protein [Populus trichocarpa]	0.900	0.932	0.536	5e-95
225441361	426	PREDICTED: protein IQ-DOMAIN 14-like [Vi	0.968	0.941	0.538	3e-94
356537497	489	PREDICTED: uncharacterized protein LOC10	0.900	0.762	0.516	8e-80
297810483	403	IQ-domain 12 [Arabidopsis lyrata subsp.	0.951	0.977	0.480	2e-79
15237584	403	IQ-domain 12 protein [Arabidopsis thalia	0.925	0.950	0.481	2e-76

>gi|224086926|ref|XP_002308007.1| predicted protein [Populus trichocarpa] gi|222853983|gb|EEE91530.1| predicted protein [Populus trichocarpa]

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 248/430 (57%), Positives = 309/430 (71%), Gaps = 19/430 (4%)

Query: 1   MGKHRSWFGWVKKLFVSEARTKAEKKSKRWKWAFGRLKFRQYPALTAPQISLNEATEEQR 60
           M K R WFGWV++LFVSE +TKAEKKSKRWKW  G LK +Q PAL AP+ S++EATE Q+
Sbjct: 1   MAKKRCWFGWVRRLFVSEQKTKAEKKSKRWKWVLGGLKVKQCPALPAPERSVSEATETQK 60

Query: 61  KHALNVAMATAVAAEAAVAAAHAAAEVVRLIGTSKSYHHLTARDRNLAAIKIQSAFRAHL 120
           K+AL VA+ATA AAEAAVAAAHAAAEVVRL G S+S HH T     LAAIKIQSAFRA+L
Sbjct: 61  KYALTVALATAAAAEAAVAAAHAAAEVVRLTGASQSSHHFTKGVETLAAIKIQSAFRAYL 120

Query: 121 ARKALRALKGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKR----DAVCKYSE 176
           ARKALRALKGLVKLQAIVRGRAVRRQA   LK LPS  +  S+VQ K     D  C+ S+
Sbjct: 121 ARKALRALKGLVKLQAIVRGRAVRRQAVIKLKHLPSKAKMLSEVQSKDIATADGFCRNSD 180

Query: 177 HKKCIRSKEELEEKEIKP-------------EFIDQRSWDYSILSKEDMEAIWLRKQEAA 223
           +K+ ++SK+E+ EKE K              EF  QRSWDYS+LSKED+EA+WL+KQEA 
Sbjct: 181 NKQVVKSKKEVREKENKGKNHKKDAQPEHMLEFNSQRSWDYSMLSKEDVEALWLKKQEAN 240

Query: 224 IKRERMMKYSYSHRESRNVHRLEESVPHKENGKESFTLEKGSNTGAYRRKELEMLNSSAH 283
           IKRERMMKYS+SHRE  N    E  +  KE+G++S  +E+ SN  A+ R+++E L S++ 
Sbjct: 241 IKRERMMKYSFSHRERGNSLLEELLLA-KESGRQSHQMERWSNKEAFNREKMENLKSTSI 299

Query: 284 ENLVPSEIYIPRHVRLRHMQKPESQDCVSSPISFPRRSFSRTKQNAFGDNDSVPNSPVFP 343
            NL   +++ P  V+ R  QK +  + +++P+S PRRSF R +    GD +S+PNSPVFP
Sbjct: 300 SNLFTGDVFSPAQVKTRSTQKQDFIEGLNTPMSVPRRSFGRAQPILAGDGNSLPNSPVFP 359

Query: 344 TYMAVTESAKAKARSMSTPKQRVAFLDSCFDHSMPYRNEISLRSSYNGESV-TRDAKNGN 402
           TYMA T+SAK KARSMSTPKQRV F DSCFD ++PY+N +SL S+YNG+    R    G 
Sbjct: 360 TYMAATQSAKLKARSMSTPKQRVGFQDSCFDQNLPYKNALSLWSTYNGDPFGIRRKSTGA 419

Query: 403 FQQLSVIMNS 412
            Q LS+ +N 
Sbjct: 420 SQNLSLSING 429

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225441365|ref|XP_002277151.1| PREDICTED: protein IQ-DOMAIN 14-like [Vitis vinifera]

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 242/424 (57%), Positives = 293/424 (69%), Gaps = 14/424 (3%)

Query: 1   MGKHRSWFGWVKKLFVSEARTKAEKKSKRWKWAFGRLKFRQYPALTAPQISLNEATEEQR 60
           MGK RSWF  VK +F+SEA+ K EKKSKRWKW F RLK +Q PAL AP  +L EA +EQ+
Sbjct: 1   MGKKRSWFSLVKGVFISEAKKKEEKKSKRWKWVFTRLKLKQCPALAAPCRTLTEARDEQK 60

Query: 61  KHALNVAMATAVAAEAAVAAAHAAAEVVRLIGTSKSYHHLTARDRNLAAIKIQSAFRAHL 120
           KHA+ VA+ATA AAEAAVAAAHAAAEVVRL GT +SYH     ++NLAAIKIQ+AFR HL
Sbjct: 61  KHAMTVALATAAAAEAAVAAAHAAAEVVRLTGTPQSYHTYDKGNQNLAAIKIQTAFRGHL 120

Query: 121 ARKALRALKGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKRDAVC-----KYS 175
           ARKALRALKGLV+LQA++RG+ +RRQ   TLKCLPS    Q++V  KR  +      K S
Sbjct: 121 ARKALRALKGLVRLQALIRGQILRRQVITTLKCLPSTANNQAQVN-KRGVLTANESYKDS 179

Query: 176 EHKKCIRSKEELEEKEIKPEFIDQ------RSWDYSILSKEDMEAIWLRKQEAAIKRERM 229
           +++K +R K EL  +EIK   I+Q      +SWD S+L KEDME IWLRKQEA  KRERM
Sbjct: 180 DNRKFLRPK-ELGGREIKDYVIEQLEGSSKKSWDCSMLLKEDMETIWLRKQEAVTKRERM 238

Query: 230 MKYSYSHRESRNVHRLEESVPHKENGKESFTLEKGSNTGAYRRKELEMLNSSAHENLVPS 289
            KYS SHRE  N    EE+  +KENGK +   E+  +   Y R+ELE   S+ H N++ S
Sbjct: 239 KKYSSSHRERINAQMTEETESYKENGKWNSQFEQWMDAREYEREELENSKSTIHLNMLNS 298

Query: 290 EIYIPRHVRLRHMQKPESQDCVSSPISFPRRSFSRTKQNAFGDNDSVPNSPVFPTYMAVT 349
           +     +V+LR+  K  S +  + P S  RRSF   K N+  DN S P+SPVFPTYMA T
Sbjct: 299 DKNGTTNVKLRNACKQNSIEGSNLPFSHSRRSFCHRKHNSEADNRSFPSSPVFPTYMATT 358

Query: 350 ESAKAKARSMSTPKQRVAFLDSCFDHSMPYRNEISLRSSYNGESVTRDAKNGNFQQLSVI 409
           ESAKAKARSMS PKQRV FLDSCFDHS  Y+N +S  SS+NGES++   KNG  Q  SV 
Sbjct: 359 ESAKAKARSMSMPKQRVGFLDSCFDHSSAYKNRLSFWSSFNGESISNIGKNGTPQN-SVT 417

Query: 410 MNSL 413
           M S 
Sbjct: 418 MKSF 421

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297739875|emb|CBI30057.3| unnamed protein product [Vitis vinifera]

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 241/423 (56%), Positives = 293/423 (69%), Gaps = 15/423 (3%)

Query: 1   MGKHRSWFGWVKKLFVSEARTKAEKKSKRWKWAFGRLKFRQYPALTAPQISLNEATEEQR 60
           MGK RSWF  VK +F+SEA+ K EKKSKRWKW F RLK +Q PAL AP  +L EA +EQ+
Sbjct: 1   MGKKRSWFSLVKGVFISEAKKKEEKKSKRWKWVFTRLKLKQCPALAAPCRTLTEARDEQK 60

Query: 61  KHALNVAMATAVAAEAAVAAAHAAAEVVRLIGTSKSYHHLTARDRNLAAIKIQSAFRAHL 120
           KHA+ VA+ATA AAEAAVAAAHAAAEVVRL GT +SYH     ++NLAAIKIQ+AFR HL
Sbjct: 61  KHAMTVALATAAAAEAAVAAAHAAAEVVRLTGTPQSYHTYDKGNQNLAAIKIQTAFRGHL 120

Query: 121 ARKALRALKGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKRDAVC-----KYS 175
           ARKALRALKGLV+LQA++RG+ +RRQ   TLKCLPS    Q++V  KR  +      K S
Sbjct: 121 ARKALRALKGLVRLQALIRGQILRRQVITTLKCLPSTANNQAQVN-KRGVLTANESYKDS 179

Query: 176 EHKKCIRSKEELEEKEIKPEFIDQ------RSWDYSILSKEDMEAIWLRKQEAAIKRERM 229
           +++K +R K EL  +EIK   I+Q      +SWD S+L KEDME IWLRKQEA  KRERM
Sbjct: 180 DNRKFLRPK-ELGGREIKDYVIEQLEGSSKKSWDCSMLLKEDMETIWLRKQEAVTKRERM 238

Query: 230 MKYSYSHRESRNVHRLEESVPHKENGKESFTLEKGSNTGAYRRKELEMLNSSAHENLVPS 289
            KYS SHRE  N    EE+  +KENGK +   E+  +   Y R+ELE   S+ H N++ S
Sbjct: 239 KKYSSSHRERINAQMTEETESYKENGKWNSQFEQWMDAREYEREELENSKSTIHLNMLNS 298

Query: 290 EIYIPRHVRLRHMQKPESQDCVSSPISFPRRSFSRTKQNAFGDNDSVPNSPVFPTYMAVT 349
           +     +V+LR+  K  S +  + P S  RRSF   K N+  DN S P+SPVFPTYMA T
Sbjct: 299 DKNGTTNVKLRNACKQNSIEGSNLPFSHSRRSFCHRKHNSEADNRSFPSSPVFPTYMATT 358

Query: 350 ESAKAKARSMSTPKQRVAFLDSCFDHSMPYRNEISLRSSYNGESVTRDAKNGNFQ--QLS 407
           ESAKAKARSMS PKQRV FLDSCFDHS  Y+N +S  SS+NGES++   KNG  Q  +  
Sbjct: 359 ESAKAKARSMSMPKQRVGFLDSCFDHSSAYKNRLSFWSSFNGESISNIGKNGTPQNSKWF 418

Query: 408 VIM 410
           VIM
Sbjct: 419 VIM 421

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297739877|emb|CBI30059.3| unnamed protein product [Vitis vinifera]

 Score =  356 bits (913), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 227/424 (53%), Positives = 287/424 (67%), Gaps = 11/424 (2%)

Query: 1   MGKHRSWFGWVKKLFVSEARTKAEKKSKRWKWAFGRLKFRQYPALTAPQISLNEATEEQR 60
           MGK RSWF  VK++F+SEA+ K EKK K W+  F R K +Q P L AP+ +L EA  EQR
Sbjct: 1   MGKKRSWFSLVKRIFISEAKEKEEKKPKSWRCLFTRFKLKQCPTLAAPRRTLTEARAEQR 60

Query: 61  KHALNVAMATAVAAEAAVAAAHAAAEVVRLIGTSKSYHHLT-ARDRNLAAIKIQSAFRAH 119
           KHAL VA+ATA AAEAAVAAA AAAEVVRL  +  SY+H    R++NLAAIKIQ+AFR +
Sbjct: 61  KHALTVALATAAAAEAAVAAARAAAEVVRLTCSPPSYYHTCDKRNQNLAAIKIQTAFRGY 120

Query: 120 LARKALRALKGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQ----EKRDAVCKYS 175
           LARKAL+ALKGLV+LQA+VRG+ VRRQA   LKCLPS    +++V        +   K  
Sbjct: 121 LARKALQALKGLVRLQALVRGQIVRRQAITKLKCLPSTANTRAQVNIGGVLTTEETYKDG 180

Query: 176 EHKKCIRSKEELEEKEIKPEFIDQ------RSWDYSILSKEDMEAIWLRKQEAAIKRERM 229
            ++K +R K+E   +EIK   I+Q      RSWDY+ILS+ED+E IWLRKQEA I+RERM
Sbjct: 181 NNRKFLRPKKECGGREIKAYVIEQLEGSGQRSWDYNILSQEDVETIWLRKQEALIRRERM 240

Query: 230 MKYSYSHRESRNVHRLEESVPHKENGKESFTLEKGSNTGAYRRKELEMLNSSAHENLVPS 289
            KYS SHRE  N    EE+ P+KENG++S  L +  ++  ++RKE E   ++A  NL+  
Sbjct: 241 KKYSSSHRERINAQMPEETEPYKENGRQSCQLVRWMDSMEHKRKEAENSKAAADSNLLNG 300

Query: 290 EIYIPRHVRLRHMQKPESQDCVSSPISFPRRSFSRTKQNAFGDNDSVPNSPVFPTYMAVT 349
            I    ++ LR+  K  S +    P S PRRSF   K N+  D+ S P+SPVFPTYMA T
Sbjct: 301 HINGTTNIELRNGWKQNSTEGSDMPFSLPRRSFCHRKHNSVIDDSSFPSSPVFPTYMAAT 360

Query: 350 ESAKAKARSMSTPKQRVAFLDSCFDHSMPYRNEISLRSSYNGESVTRDAKNGNFQQLSVI 409
           ESAKAKAR++STPKQR+ FLDSCFD S PY N  S  SS NGES++   ++G   Q +V 
Sbjct: 361 ESAKAKARALSTPKQRLGFLDSCFDQSSPYTNRPSFWSSLNGESISSSGRSGYSWQNTVS 420

Query: 410 MNSL 413
           M SL
Sbjct: 421 MKSL 424

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147819066|emb|CAN64892.1| hypothetical protein VITISV_016441 [Vitis vinifera]

 Score =  354 bits (909), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 225/400 (56%), Positives = 274/400 (68%), Gaps = 14/400 (3%)

Query: 25   KKSKRWKWAFGRLKFRQYPALTAPQISLNEATEEQRKHALNVAMATAVAAEAAVAAAHAA 84
            +KSKRWKW F RLK +Q PAL AP  +L EA +EQ+KHA+ VA+ATA AAEAAVAAAHAA
Sbjct: 1100 QKSKRWKWVFTRLKLKQCPALAAPCRTLTEARDEQKKHAMTVALATAAAAEAAVAAAHAA 1159

Query: 85   AEVVRLIGTSKSYHHLTARDRNLAAIKIQSAFRAHLARKALRALKGLVKLQAIVRGRAVR 144
            AEVVRL GT +SYH     ++NLAAIKIQ+AFR HLARKALRALKGLV+LQA++RG+ +R
Sbjct: 1160 AEVVRLTGTPQSYHTYDKGNQNLAAIKIQTAFRGHLARKALRALKGLVRLQALIRGQILR 1219

Query: 145  RQATATLKCLPSNGEKQSKVQEKRDAVC-----KYSEHKKCIRSKEELEEKEIKPEFIDQ 199
            RQ   TLKCLPS    Q++V  KR  +      K S+++K +R KE L  +EIK   I+Q
Sbjct: 1220 RQVITTLKCLPSTANNQAQVN-KRGVLTANESYKDSDNRKFLRPKE-LGGREIKDYVIEQ 1277

Query: 200  ------RSWDYSILSKEDMEAIWLRKQEAAIKRERMMKYSYSHRESRNVHRLEESVPHKE 253
                  +SWD S+L KEDME IWLRKQEA  KRERM KYS SHRE  N    EE+  +KE
Sbjct: 1278 LEGXSKKSWDCSMLLKEDMEXIWLRKQEAXTKRERMKKYSSSHRERINAQMTEETESYKE 1337

Query: 254  NGKESFTLEKGSNTGAYRRKELEMLNSSAHENLVPSEIYIPRHVRLRHMQKPESQDCVSS 313
            NGK +   E+  +   Y R+ELE   S+ H N++ S+     +V+LR+  K  S +  + 
Sbjct: 1338 NGKWNSQFEQWMDAREYEREELENSKSTIHLNMLNSDKNGTTNVKLRNACKQNSIEGSNL 1397

Query: 314  PISFPRRSFSRTKQNAFGDNDSVPNSPVFPTYMAVTESAKAKARSMSTPKQRVAFLDSCF 373
            P S  RRSF   K N+  DN S P+SPVFPTYMA TESAKAKARSMS  KQRV FLDSCF
Sbjct: 1398 PFSHSRRSFCHRKHNSEADNRSFPSSPVFPTYMATTESAKAKARSMSMXKQRVGFLDSCF 1457

Query: 374  DHSMPYRNEISLRSSYNGESVTRDAKNGNFQQLSVIMNSL 413
            DHS  Y+N +S  SS+NGES++   KNG  Q  SV M S 
Sbjct: 1458 DHSSAYKNRLSFWSSFNGESISNIGKNGTPQN-SVTMKSF 1496

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137794|ref|XP_002322653.1| predicted protein [Populus trichocarpa] gi|222867283|gb|EEF04414.1| predicted protein [Populus trichocarpa]

 Score =  354 bits (908), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 215/401 (53%), Positives = 277/401 (69%), Gaps = 28/401 (6%)

Query: 1   MGKHRSWFGWVKKLFVSEARTKAEKKSKRWKWAFGRLKFRQYPALTAPQI----SLNEAT 56
           M + + WFGWV++LFVSE + KAEKKSKRWKW  G LK +Q  AL APQ     +++EA+
Sbjct: 1   MARKKRWFGWVRRLFVSEQKPKAEKKSKRWKWVLGGLKVKQCLALPAPQRREVRTVSEAS 60

Query: 57  EEQRKHALNVAMATAVAAEAAVAAAHAAAEVVRLIGTSKSYHHLTARDRNLAAIKIQSAF 116
           E Q+K+AL VA+ATA AA+AAVAAAHAAAEVVRL G S   HH T     LAAIKIQSAF
Sbjct: 61  ETQKKYALTVALATAAAADAAVAAAHAAAEVVRLTGASHPSHHFTKGVETLAAIKIQSAF 120

Query: 117 RAHLARKALRALKGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKR---DAVCK 173
           RA+LARKALRALKGLVKLQAIVRG+ VRRQA   LK  PSN +  S+VQ K    D  CK
Sbjct: 121 RAYLARKALRALKGLVKLQAIVRGQVVRRQALIKLKHFPSNAKMMSEVQAKGITADGFCK 180

Query: 174 YSEHKKCIRSKEELEEKEIK-----------PEFID---------QRSWDYSILSKEDME 213
             E+K  ++S++E++EKE K            E ++         Q+SW++S+ SKED+E
Sbjct: 181 SGENKHVVKSRKEVQEKETKVREMILQLLKSKEVVEKEHKLVLNSQKSWNFSLRSKEDVE 240

Query: 214 AIWLRKQEAAIKRERMMKYSYSHRESRNVHRLEESVPHKENGKESFTLEKGSNTGAYRRK 273
           A+ L+KQEA IKRERMMKYS+S+RE  N    EES   KE+G++S  +++  N  AY R+
Sbjct: 241 ALLLKKQEANIKRERMMKYSFSNRERGN-GLFEESQLAKESGRQSHQIKQWPNKEAYNRE 299

Query: 274 ELEMLNSSAHENLVPSEIYIPRHVRLRHMQKPESQDCVSSPISFPRRSFSRTKQNAFGDN 333
            +E L S+   NL   +I+ P  V+ R  +K +  + +++P+SFPRRSF   + +  G+ 
Sbjct: 300 RMENLKSAPISNLFTGDIFSPAQVKTRSTRKQDFIEGLNTPVSFPRRSFGSMRPSLAGEG 359

Query: 334 DSVPNSPVFPTYMAVTESAKAKARSMSTPKQRVAFLDSCFD 374
           +S+PNSPVFPTYMA T+SAK KARSMSTPKQR  F DSCF+
Sbjct: 360 NSLPNSPVFPTYMAATQSAKLKARSMSTPKQREGFQDSCFE 400

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225441361|ref|XP_002274878.1| PREDICTED: protein IQ-DOMAIN 14-like [Vitis vinifera]

 Score =  351 bits (901), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 222/412 (53%), Positives = 281/412 (68%), Gaps = 11/412 (2%)

Query: 1   MGKHRSWFGWVKKLFVSEARTKAEKKSKRWKWAFGRLKFRQYPALTAPQISLNEATEEQR 60
           MGK RSWF  VK++F+SEA+ K EKK K W+  F R K +Q P L AP+ +L EA  EQR
Sbjct: 1   MGKKRSWFSLVKRIFISEAKEKEEKKPKSWRCLFTRFKLKQCPTLAAPRRTLTEARAEQR 60

Query: 61  KHALNVAMATAVAAEAAVAAAHAAAEVVRLIGTSKSYHHLT-ARDRNLAAIKIQSAFRAH 119
           KHAL VA+ATA AAEAAVAAA AAAEVVRL  +  SY+H    R++NLAAIKIQ+AFR +
Sbjct: 61  KHALTVALATAAAAEAAVAAARAAAEVVRLTCSPPSYYHTCDKRNQNLAAIKIQTAFRGY 120

Query: 120 LARKALRALKGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQ----EKRDAVCKYS 175
           LARKAL+ALKGLV+LQA+VRG+ VRRQA   LKCLPS    +++V        +   K  
Sbjct: 121 LARKALQALKGLVRLQALVRGQIVRRQAITKLKCLPSTANTRAQVNIGGVLTTEETYKDG 180

Query: 176 EHKKCIRSKEELEEKEIKPEFIDQ------RSWDYSILSKEDMEAIWLRKQEAAIKRERM 229
            ++K +R K+E   +EIK   I+Q      RSWDY+ILS+ED+E IWLRKQEA I+RERM
Sbjct: 181 NNRKFLRPKKECGGREIKAYVIEQLEGSGQRSWDYNILSQEDVETIWLRKQEALIRRERM 240

Query: 230 MKYSYSHRESRNVHRLEESVPHKENGKESFTLEKGSNTGAYRRKELEMLNSSAHENLVPS 289
            KYS SHRE  N    EE+ P+KENG++S  L +  ++  ++RKE E   ++A  NL+  
Sbjct: 241 KKYSSSHRERINAQMPEETEPYKENGRQSCQLVRWMDSMEHKRKEAENSKAAADSNLLNG 300

Query: 290 EIYIPRHVRLRHMQKPESQDCVSSPISFPRRSFSRTKQNAFGDNDSVPNSPVFPTYMAVT 349
            I    ++ LR+  K  S +    P S PRRSF   K N+  D+ S P+SPVFPTYMA T
Sbjct: 301 HINGTTNIELRNGWKQNSTEGSDMPFSLPRRSFCHRKHNSVIDDSSFPSSPVFPTYMAAT 360

Query: 350 ESAKAKARSMSTPKQRVAFLDSCFDHSMPYRNEISLRSSYNGESVTRDAKNG 401
           ESAKAKAR++STPKQR+ FLDSCFD S PY N  S  SS NGES++   ++G
Sbjct: 361 ESAKAKARALSTPKQRLGFLDSCFDQSSPYTNRPSFWSSLNGESISSSGRSG 412

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356537497|ref|XP_003537263.1| PREDICTED: uncharacterized protein LOC100800767 [Glycine max]

 Score =  303 bits (777), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 203/393 (51%), Positives = 267/393 (67%), Gaps = 20/393 (5%)

Query: 1   MGKHRSWFGWVKKLFVSEARTKAEKKSKRWKWAFGRLKFRQYPALTAPQISLNEATEEQR 60
           M K +SWFGWVK+LF SE++   + +  RW W+FGR+K +QYP +TAP  +L EA+EEQR
Sbjct: 1   MAKRKSWFGWVKRLFTSESKDN-KVRPNRWGWSFGRIKQKQYPTITAPNRTLIEASEEQR 59

Query: 61  KHALNVAMATAVAAEAAVAAAHAAAEVVRLIGTSKSYHHLTARDRNLAAIKIQSAFRAHL 120
           KHAL VA+ATA AAEAAVAAAHAAAEVV+L GTS+SY +L+  D++LAAIKIQS +RAHL
Sbjct: 60  KHALTVAIATAAAAEAAVAAAHAAAEVVKLTGTSRSYSYLSKGDKSLAAIKIQSTYRAHL 119

Query: 121 ARKALRALKGLVKLQAIVRGRAVRRQATAT-LKCLPSNGEKQSKVQEKRDAVCKYSEHKK 179
           ARKALRALKG+++LQAI+RG+AVRRQ +   L+  PSN   Q  +QE R +     + ++
Sbjct: 120 ARKALRALKGVIRLQAIIRGQAVRRQVSNNILQNFPSNVRNQVGIQE-RSSHNTAEQIQQ 178

Query: 180 CIRSKEELEEKEIKPEFIDQRSWDYSILSKEDMEAIWLRKQEAAIKRERMMKYSYSHRES 239
             + K+++EEKE+K E   QR+WD S+LS+ED+EAIW RKQEA +KRERM +YS S RE+
Sbjct: 179 SPKQKKKIEEKELKSECHGQRTWDCSLLSREDIEAIWFRKQEAMVKRERMKQYSSSQRET 238

Query: 240 RNVHRLEESVPHKENGKESFTLEKGSNTGAYRRKELEMLNSSAHENLVPSE-IYIPRHVR 298
           +N   LEESV +K+ G+ES                   L    H+     + +Y P    
Sbjct: 239 KNNQMLEESVHNKDFGRES----------------CHTLGDWLHQETRDWDLVYKPTLTS 282

Query: 299 LRHMQKPESQDCVSSPISFPRRSFSRTKQNAFGDNDSVPNSPVFPTYMAVTESAKAKARS 358
                K E Q+ +S+  S PR+SFS  K++  GD  S+ NS VFPTYMAVTES+KAK RS
Sbjct: 283 NLITTKKEFQEGLSTQTSIPRKSFSLVKRSLNGDESSMSNSLVFPTYMAVTESSKAKMRS 342

Query: 359 MSTPKQRVAFLDSCFDHSMPYRNEISLRSSYNG 391
           +STPKQR   LD C + + P++  I   SSY G
Sbjct: 343 ISTPKQRTGILDICSNQNEPHKEGIFFGSSYYG 375

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297810483|ref|XP_002873125.1| IQ-domain 12 [Arabidopsis lyrata subsp. lyrata] gi|297318962|gb|EFH49384.1| IQ-domain 12 [Arabidopsis lyrata subsp. lyrata]

 Score =  302 bits (774), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 197/410 (48%), Positives = 267/410 (65%), Gaps = 16/410 (3%)

Query: 1   MGKHRSWFGWVKKLFVSEARTKAEKKSKRWKWAFGRLKFRQYPALTAPQI-SLNEATEEQ 59
           M K RSWFGW+K+LFV EA+ K EK  +R +W F RLK RQ  A    +  +LNEAT++Q
Sbjct: 1   MAKRRSWFGWMKRLFVCEAKAKPEK-PRRLRWVFRRLKLRQQIATYGQETRTLNEATQDQ 59

Query: 60  RKHALNVAMATAVAAEAAVAAAHAAAEVVRLIGTSKSYHHLTAR-DRNLAAIKIQSAFRA 118
           RKHA+NVA+ATA AAEAAVAAA AAAEVVR+ G + +  H   +   N+AAIKIQSAFRA
Sbjct: 60  RKHAMNVAIATAAAAEAAVAAAKAAAEVVRMAGNAFTSQHFVKKLAPNVAAIKIQSAFRA 119

Query: 119 HLARKALRALKGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKRDAVCKYSEHK 178
           +LARKALRALK LV+LQAIVRGRAVRR+ +A LK   +N   +S + ++      +S+ K
Sbjct: 120 YLARKALRALKALVRLQAIVRGRAVRRKVSALLKSSLTNKASRSSIIQRNTERKHWSKTK 179

Query: 179 KCIRSKEELEEKEIKPEFIDQRSWDYSILSKEDMEAIWLRKQEAAIKRERMMKYSYSHRE 238
             I+ + ++    +    +    WD S L+ EDM+AIWLRKQE  IKR+RM+KYS SHRE
Sbjct: 180 SEIKEELQVSHHSMCNSKVKCNGWDSSALTNEDMKAIWLRKQEGVIKRDRMLKYSRSHRE 239

Query: 239 SRNVHRLEESVPHKENGKESFTLEKGSNTGAYRRKELEMLNSSAHENLVPSEIYIPRHVR 298
            R+ H L ES+  K+ G  S  LE    + + +         S +  L+PSE+ +P  V+
Sbjct: 240 RRSPHMLLESLYTKDMGMRSCRLEHWGGSKSAK---------SINSFLIPSEMLVPTKVK 290

Query: 299 LRHMQKPESQDCVSSPISFPRRSFSRTKQNAFGDNDSVPNSPVFPTYMAVTESAKAKARS 358
           LR +Q+ +S D   SP SFPRRSFSR +Q+   D   +P+S  F  YM++TESA+ K RS
Sbjct: 291 LRTLQRQDSGDGQDSPFSFPRRSFSRLEQSLLEDESWIPSSNSFQPYMSMTESAREKMRS 350

Query: 359 MSTPKQRVAFLDSCFDHSMPYRNEISLRSSYNGESVTRDAKNGNFQQLSV 408
           +STP+QRV  +DS FD+     ++ SL SS+    V  ++KN N ++ S+
Sbjct: 351 LSTPRQRVGLMDSLFDNYKKDGDKGSLWSSF----VCENSKNNNAKKSSL 396

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15237584|ref|NP_196016.1| IQ-domain 12 protein [Arabidopsis thaliana] gi|7406406|emb|CAB85516.1| putative protein [Arabidopsis thaliana] gi|332003293|gb|AED90676.1| IQ-domain 12 protein [Arabidopsis thaliana]

 Score =  292 bits (747), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 190/395 (48%), Positives = 255/395 (64%), Gaps = 12/395 (3%)

Query: 1   MGKHRSWFGWVKKLFVSEARTKAEKKSKRWKWAFGRLKFRQYPALTAPQI-SLNEATEEQ 59
           M K RSWFGW+K+LF+ EA+ +AEK  +R +W F RLK R   A    +  +LNEAT++Q
Sbjct: 1   MAKRRSWFGWMKRLFICEAKARAEK-PRRLRWVFKRLKLRPQLATCGQETRTLNEATQDQ 59

Query: 60  RKHALNVAMATAVAAEAAVAAAHAAAEVVRLIGTSKSYHHLTAR-DRNLAAIKIQSAFRA 118
           RKHA+NVA+ATA AAEAAVAAA AAAEVVR+ G + +  H   +   N+AAIKIQSAFRA
Sbjct: 60  RKHAMNVAIATAAAAEAAVAAAKAAAEVVRMAGNAFTSQHFVKKLAPNVAAIKIQSAFRA 119

Query: 119 HLARKALRALKGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKRDAVCKYSEHK 178
            LARKALRALK LV+LQAIVRGRAVRR+ +A LK   SN    S + +++     +S  K
Sbjct: 120 SLARKALRALKALVRLQAIVRGRAVRRKVSALLKSSHSNKASTSNIIQRQTERKHWSNTK 179

Query: 179 KCIRSKEELEEKEIKPEFIDQRSWDYSILSKEDMEAIWLRKQEAAIKRERMMKYSYSHRE 238
             I+ + ++    +    +    WD S L+KED++AIWLRKQE  IKR+RM+KYS S RE
Sbjct: 180 SEIKEELQVSNHSLCNSKVKCNGWDSSALTKEDIKAIWLRKQEGVIKRDRMLKYSRSQRE 239

Query: 239 SRNVHRLEESVPHKENGKESFTLEKGSNTGAYRRKELEMLNSSAHENLVPSEIYIPRHVR 298
            R+ H L ES+  K+ G  S  LE    + + +         S +  L+PSE+ +P  V+
Sbjct: 240 RRSPHMLVESLYAKDMGMRSCRLEHWGESKSAK---------SINSFLIPSEMLVPTKVK 290

Query: 299 LRHMQKPESQDCVSSPISFPRRSFSRTKQNAFGDNDSVPNSPVFPTYMAVTESAKAKARS 358
           LR +Q+ +S D   SP SFPRRSFSR +Q+   D      S  F  YM+VTESA+ K RS
Sbjct: 291 LRSLQRQDSGDGQDSPFSFPRRSFSRLEQSILEDESWFQRSNGFQPYMSVTESAREKMRS 350

Query: 359 MSTPKQRVAFLDSCFDHSMPYRNEISLRSSYNGES 393
           +STP+QRV  +DS FD+     +++SL S++  E+
Sbjct: 351 LSTPRQRVGIMDSLFDNYKKDGDKVSLWSTFVCEN 385

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	414
TAIR|locus:2150650	403	IQD12 "AT5G03960" [Arabidopsis	0.946	0.972	0.365	4e-58
TAIR|locus:2181635	443	IQD11 "AT5G13460" [Arabidopsis	0.705	0.659	0.292	1.7e-24
TAIR|locus:504956236	153	AT1G76705 "AT1G76705" [Arabido	0.115	0.313	0.645	3.9e-17
TAIR|locus:2100504	430	IQD3 "AT3G52290" [Arabidopsis	0.550	0.530	0.275	6.3e-17
TAIR|locus:2043959	669	IQD14 "AT2G43680" [Arabidopsis	0.613	0.379	0.263	5e-13
TAIR|locus:2097478	517	IQD13 "AT3G59690" [Arabidopsis	0.599	0.479	0.268	1e-12
TAIR|locus:2143503	461	iqd2 "AT5G03040" [Arabidopsis	0.570	0.511	0.225	3.4e-12
TAIR|locus:2130200	387	IQD19 "AT4G14750" [Arabidopsis	0.137	0.147	0.433	5.5e-09
TAIR|locus:2018837	371	IQD7 "AT1G17480" [Arabidopsis	0.618	0.690	0.243	7e-09
TAIR|locus:2090409	422	IQD5 "AT3G22190" [Arabidopsis	0.620	0.609	0.250	3.1e-08

TAIR|locus:2150650 IQD12 "AT5G03960" [Arabidopsis thaliana (taxid:3702)]

 Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
 Identities = 148/405 (36%), Positives = 206/405 (50%)

Query:     1 MGKHRSWFGWVKKLFVSEARTKAEKKSKRWKWAFGRLKFRQYPALTAPQI-SLNEATEEQ 59
             M K RSWFGW+K+LF+ EA+ +AEK  +R +W F RLK R   A    +  +LNEAT++Q
Sbjct:     1 MAKRRSWFGWMKRLFICEAKARAEKP-RRLRWVFKRLKLRPQLATCGQETRTLNEATQDQ 59

Query:    60 RKHALNXXXXXXXXXXXXXXXXXXXXXXXRLIGTS-KSYHHLTARDRNLAAIKIQSXXXX 118
             RKHA+N                       R+ G +  S H +     N+AAIKIQS    
Sbjct:    60 RKHAMNVAIATAAAAEAAVAAAKAAAEVVRMAGNAFTSQHFVKKLAPNVAAIKIQSAFRA 119

Query:   119 XXXXXXXXXXXXXXXXQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKRDAVCKYSEHK 178
                             QAIVRGRAVRR+ +A LK   SN    S + +++     +S  K
Sbjct:   120 SLARKALRALKALVRLQAIVRGRAVRRKVSALLKSSHSNKASTSNIIQRQTERKHWSNTK 179

Query:   179 KCIRSXXXXXXXXXXXXFIDQRSWDYSILSKEDMEAIWLRKQEAAIKRERMMKYSYSHRE 238
               I+              +    WD S L+KED++AIWLRKQE  IKR+RM+KYS S RE
Sbjct:   180 SEIKEELQVSNHSLCNSKVKCNGWDSSALTKEDIKAIWLRKQEGVIKRDRMLKYSRSQRE 239

Query:   239 SRNVHRLEESVPHKENGKESFTLEKGSNTGAYRRKELEMLNSSAHENLVPSEIYIPRHVR 298
              R+ H L ES+  K+ G  S  LE    +     K  + +NS     L+PSE+ +P  V+
Sbjct:   240 RRSPHMLVESLYAKDMGMRSCRLEHWGES-----KSAKSINSF----LIPSEMLVPTKVK 290

Query:   299 LRHMQKPESQDCVXXXXXXXXXXXXXTKQNAFGDNDSVPNSPVFPTYMAVTESAKAKARS 358
             LR +Q+ +S D                +Q+   D      S  F  YM+VTESA+ K RS
Sbjct:   291 LRSLQRQDSGDGQDSPFSFPRRSFSRLEQSILEDESWFQRSNGFQPYMSVTESAREKMRS 350

Query:   359 MSTPKQRVAFLDSCFDHSMPYRNEISLRSSYNGE-SVTRDAKNGN 402
             +STP+QRV  +DS FD+     +++SL S++  E S   +AK  +
Sbjct:   351 LSTPRQRVGIMDSLFDNYKKDGDKVSLWSTFVCENSKINNAKKSS 395

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2181635 IQD11 "AT5G13460" [Arabidopsis thaliana (taxid:3702)]

 Score = 282 (104.3 bits), Expect = 1.7e-24, P = 1.7e-24
 Identities = 92/314 (29%), Positives = 147/314 (46%)

Query:     1 MGKHRSWFGWVKKLFVSEARTKAEKKSKRWKWAFGRLKFRQ-YPALTAP--QISLNEATE 57
             M K +  F  +K++F+SE  +  EKK KR KW F +L+ ++  P++TAP    + +E+ E
Sbjct:     1 MAKKKGLFTVLKRIFISEVNS--EKKEKRRKWTFWKLRIKKRLPSITAPPEHRTSHESHE 58

Query:    58 EQRKHALNXXXXXXXXXXXXXXXXXXXXXXXRLIGTSK---SYH-HLTARDRNLAAIKIQ 113
             EQ++  ++                           T+     Y   L  ++  LAA +IQ
Sbjct:    59 EQKEEIVSDVGEISQVSCSRQLDSIEESKGSTSPETADLVVQYQMFLNRQEEVLAATRIQ 118

Query:   114 SXXXXXXXXXXXXXXXXXXXXQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKRDAVCK 173
             +                    QA +RGRAVRRQA  TLKCL S    QS+V  KR  +  
Sbjct:   119 TAFRGHLARKALRALKGIVKLQAYIRGRAVRRQAMTTLKCLQSVVNIQSQVCGKRTQI-P 177

Query:   174 YSEHKKCIRSXXXXXXXXXXXXFIDQRSWDYSILSKEDMEAIWLRKQEAAIKRERMMKYS 233
                H+    S               Q+ WD S+L+KE+ EA+ + K+EA+++RER+ +Y+
Sbjct:   178 GGVHRDYEESNIFNDNILKVDTN-GQKRWDDSLLTKEEKEAVVMSKKEASLRRERIKEYA 236

Query:   234 YSHRESRNVHRLEESVPHKENGKESFTLEKGSNTGAYRRKELEMLNSSAH-----ENLVP 288
              +HR+S       ES   + N K  + L++  +T   + KELE L+ S+      E L  
Sbjct:   237 VTHRKSA------ESYQKRSNTKWKYWLDEWVDTQLTKSKELEDLDFSSKTKPKDETLNE 290

Query:   289 SEIYIPRHVRLRHM 302
              ++  PR+   R +
Sbjct:   291 KQLKTPRNSSPRRL 304

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0042546 "cell wall biogenesis" evidence=RCA

TAIR|locus:504956236 AT1G76705 "AT1G76705" [Arabidopsis thaliana (taxid:3702)]

 Score = 170 (64.9 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
 Identities = 31/48 (64%), Positives = 40/48 (83%)

Query:   202 WDYSILSKEDMEAIWLRKQEAAIKRERMMKYSYSHRESRNVHRLEESV 249
             WD S L+KED++AIWLRKQE  IKR+RM+KYS SH+E R+ H LE+S+
Sbjct:    54 WDSSALTKEDIKAIWLRKQEGVIKRDRMLKYSRSHQERRSPHMLEDSL 101

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2100504 IQD3 "AT3G52290" [Arabidopsis thaliana (taxid:3702)]

 Score = 212 (79.7 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
 Identities = 68/247 (27%), Positives = 108/247 (43%)

Query:     1 MGKHRSWFGWVKKLFVSEARTKAEKKS-KRWKWAFGRLKFRQ-------YPALTAPQISL 52
             MGK  SWF  VKK    E + K E+K  K  KW FG+ K          Y   T     L
Sbjct:     1 MGK--SWFSAVKKALSPEPKQKKEQKPHKSKKW-FGKSKKLDVTNSGAAYSPRTVKDAKL 57

Query:    53 NEATEEQRKHALNXXXXXXXXXXXXXXXXXXXXXXXRLIGTSKSYHHLTARDRNLAAIKI 112
              E  E+Q +HA +                       RL   S+ +   +  +  +AAIKI
Sbjct:    58 KEIEEQQSRHAYSVAIATAAAAEAAVAAAQAAAEVVRLSALSR-FPGKSMEE--IAAIKI 114

Query:   113 QSXXXXXXXXXXXXXXXXXXXXQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKRDAVC 172
             Q+                    +++V+G+ VRRQAT+TL+ + +    Q +++E+R    
Sbjct:   115 QTAFRGYMARRALRALRGLVRLKSLVQGKCVRRQATSTLQSMQTLARVQYQIRERR---L 171

Query:   173 KYSEHKKCIRSXXXXXXXXXXXXFIDQRSWDYSILSKEDMEAIWLRKQEAAIKRERMMKY 232
             + SE K+ +                   +W+ S LS+E +EA  L KQ A ++RE+ + Y
Sbjct:   172 RLSEDKQALTRQLQQKHNKDFDK--TGENWNDSTLSREKVEANMLNKQVATMRREKALAY 229

Query:   233 SYSHRES 239
             ++SH+ +
Sbjct:   230 AFSHQNT 236

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2043959 IQD14 "AT2G43680" [Arabidopsis thaliana (taxid:3702)]

 Score = 187 (70.9 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
 Identities = 73/277 (26%), Positives = 116/277 (41%)

Query:   105 RNLAAIKIQSXXXXXXXXXXXXXXXXXXXXQAIVRGRAVRRQATATLKCLPSNGEKQSKV 164
             ++ +A KIQ                     Q +VRG +V+RQ    +K +      QS++
Sbjct:   322 QHASATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQSQI 381

Query:   165 QEKRDAVCKYSEHKKCIRSXXXXXXXXXXXXFIDQRSWDYSILSKEDMEAIWLRKQEAAI 224
             Q +R    K  E++  +                D  +WD S+L+KE+ ++   RK +A I
Sbjct:   382 QSRR---IKMLENQAQVEKDEAKWAASEAGN--D--NWDDSVLTKEERDSRSQRKTDAII 434

Query:   225 KRERMMKYSYSHRESRNVHRLEE---SVPHKENGKESFTLEKGSNTGAYRRKELEMLNSS 281
             KRER M Y+YS +  +N  +  +   S P   N  +       S   +Y + + +   + 
Sbjct:   435 KRERSMAYAYSRKLWKNSPKSTQDNRSFPQWWNWVDRQN-PLASPAPSYSQPQRDFRLTP 493

Query:   282 AHENLVP-SEIYIPRHVRL-RHMQK--PESQDC--------VXXXXXXXXXXXXXTKQNA 329
             +     P S+     H+RL  H     P S           +              + + 
Sbjct:   494 SRLCPSPLSQSSKQHHIRLDNHFDTSTPRSSRSTFHTPSRPIHTGTSRYSRGRLRGQDSP 553

Query:   330 FGDNDSVPNSPVFPTYMAVTESAKAKARSMSTPKQRV 366
             F D+DS+ + P FP+YMA T SAKAK R  S PK+RV
Sbjct:   554 FKDDDSLTSCPPFPSYMAPTVSAKAKVRPNSNPKERV 590

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2097478 IQD13 "AT3G59690" [Arabidopsis thaliana (taxid:3702)]

 Score = 182 (69.1 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
 Identities = 76/283 (26%), Positives = 119/283 (42%)

Query:   105 RNLAAIKIQSXXXXXXXXXXXXXXXXXXXXQAIVRGRAVRRQATATLKCLPSNGEKQSKV 164
             +N  AIKIQ+                    Q +VRG +V+RQ    +K +      Q++V
Sbjct:   168 KNAYAIKIQAAFRGYMARRSFRALKGLVRLQGVVRGHSVKRQTMNAMKYMQLLVRVQTQV 227

Query:   165 QEKRDAVCKYSEHKKCIRSXXXXXXXXXXXXFIDQRSWDYSILSKEDMEAIWLRKQEAAI 224
             Q +R    +  E++   R+              D   WD S+L+KE+ +    RK +A I
Sbjct:   228 QSRR---IQMLENRA--RNDKDDTKLVSSRMSDD---WDDSVLTKEEKDVRLHRKIDAMI 279

Query:   225 KRERMMKYSYSHRESRNVHRLEESV-----P-------HKENGKESFTLEK-----GSNT 267
             KRER M Y+YSH+  +N  +  + +     P        ++N  + F L           
Sbjct:   280 KRERSMAYAYSHQLWKNSPKSAQDIRTSGFPLWWNWVDRQKNQNQPFRLTPTRPSLSPQP 339

Query:   268 GAYRRKELEMLNS--SAHENLVPSEIYIPRHVRLRHMQKPESQDCVXXXXXXXXXXXXXT 325
              +  +    + NS  ++  N   S    P   R  H  +P S                 T
Sbjct:   340 QSSNQNHFRLNNSFDTSTPNSSKSTFVTPS--RPIHTPQPYSSSV----SRYSRGGGRAT 393

Query:   326 KQNAFGDNDSVPNSPVF--PTYMAVTESAKAKARSMSTPKQRV 366
             + + F D+DS+ + P F  P+YMA T SAKAK R+ S PK+R+
Sbjct:   394 QDSPFKDDDSLTSCPPFSAPSYMAPTVSAKAKLRANSNPKERM 436

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2143503 iqd2 "AT5G03040" [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
 Identities = 56/248 (22%), Positives = 95/248 (38%)

Query:     1 MGKHRSWFGWVKKLFVSEARTKAEKKSKRWKWAFGRL----KFRQY-----PALTAPQIS 51
             MGK   WF  VKK F  +++   +K ++               RQ      PAL   ++ 
Sbjct:     1 MGKKAKWFSSVKKAFSPDSKKSKQKLAEGQNGVISNPPVVDNVRQSSSSPPPALAPREVR 60

Query:    52 LNEATEEQRKHALNXXXXXXXXXXXXXXXXXXXXXXXRLIGTSKSYHHLTARDRNLAAIK 111
             + E   E+ +                            ++  +         +   AAI 
Sbjct:    61 VAEVIVERNRDLSPPSTADAVNVTATDVPVVPSSSAPGVVRRATPTRFAGKSNEEAAAIL 120

Query:   112 IQSXXXXXXXXXXXXXXXXXXXXQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKRDAV 171
             IQ+                    + ++ G  V+RQA  TLKC+ +    QS+++ +R   
Sbjct:   121 IQTIFRGYLARRALRAMRGLVRLKLLMEGSVVKRQAANTLKCMQTLSRVQSQIRARR--- 177

Query:   172 CKYSEHKKCIRSXXXXXXXXXXXXFIDQRSWDYSILSKEDMEAIWLRKQEAAIKRERMMK 231
              + SE  +  +               +  +W+ SI SKE +EA  L K EA ++RER + 
Sbjct:   178 IRMSEENQARQKQLLQKHAKELAGLKNGDNWNDSIQSKEKVEANLLSKYEATMRRERALA 237

Query:   232 YSYSHRES 239
             YSYSH+++
Sbjct:   238 YSYSHQQN 245

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2130200 IQD19 "AT4G14750" [Arabidopsis thaliana (taxid:3702)]

 Score = 106 (42.4 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
 Identities = 26/60 (43%), Positives = 35/60 (58%)

Query:   331 GDNDSVPNSPVFPTYMAVTESAKAKARSMSTPKQRVAFLDSCFDHSMPYRNEISLRSSYN 390
             GD  S  + P+FP YMA T+S+KAKARS S PKQR   +   ++  M  R   S+ +  N
Sbjct:   254 GDTLSSYDYPLFPNYMANTQSSKAKARSQSAPKQRPPEI---YEKQMSGRRRSSMEAPRN 310

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2018837 IQD7 "AT1G17480" [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
 Identities = 68/279 (24%), Positives = 110/279 (39%)

Query:   105 RNLAAIKIQSXXXXXXXXXXXXXXXXXXXXQAIVRGRAVRRQATATLKCLPSNGEKQSKV 164
             R  A+ +IQ+                    QAI RGR VR+QA  TL+C+ +    QS+V
Sbjct:    93 REWASTRIQAAFRAFLARQAFRALKAVVRIQAIFRGRQVRKQAAVTLRCMQALVRVQSRV 152

Query:   165 QEKRDAVCKYSEHKKCIRSXXXXXXXXXXXXFIDQRSWDYSILSKEDMEAIWLRKQEAAI 224
             +  R A     E K  ++                ++ W  S  S ++++     KQE AI
Sbjct:   153 RAHRRAPSDSLELKDPVKQT--------------EKGWCGSPRSIKEVKTKLQMKQEGAI 198

Query:   225 KRERMMKYSYSHRESRNVHRLEESVPHKENGKESFTLEKGSNTGAYRRKELEMLNSSAHE 284
             KRER M Y+ +H+          ++ H    K S       + G + RK  E    S +E
Sbjct:   199 KRERAMVYALTHQSRTCPSPSGRAITHHGLRKSSPGWNWYDDVGTFSRKSSESSVLSEYE 258

Query:   285 NLV--PSEIYIPRHVRLRHMQKPESQDCVXXXXXXXXXXXXXTKQNAFGDNDSVPNSPVF 342
              +    + +   R +    +  P     +             T Q+    + SV +   +
Sbjct:   259 TVTVRKNNLSSTRVLARPPLLLPPVSSGMSYDSLHDETSTSSTSQSPVAFSSSVLDGGGY 318

Query:   343 ---PTYMAVTESAKAKAR----SMSTPKQRVAFLDSCFD 374
                P+YM++T+S +AK R    S +   +R A  D C D
Sbjct:   319 YRKPSYMSLTQSTQAKQRQSGLSCNGDARRSAGSDQCTD 357

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2090409 IQD5 "AT3G22190" [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 3.1e-08, P = 3.1e-08
 Identities = 69/275 (25%), Positives = 117/275 (42%)

Query:   106 NLAAIKIQSXXXXXXXXXXXXXXXXXXXXQAIVRGRAVRRQATATLKCLPSNGEKQSKVQ 165
             N AA +IQ+                    QA+VRG AVR+QA  TL+C+ +    Q++V+
Sbjct:    88 NRAATRIQTAYRGFLARRALRALKGLVRLQALVRGHAVRKQAAVTLRCMQALVRVQARVR 147

Query:   166 EKRDAVCKYSEHKKCIRSXXXXXXXXXXXXFIDQRSWDYSILSKEDMEAIWLRKQEAAIK 225
              +R  +    E +   ++             I++  W  SI S E ++A  L++QEAA K
Sbjct:   148 ARRVRLALELESETSQQTLQQQLADEARVREIEE-GWCDSIGSVEQIQAKLLKRQEAAAK 206

Query:   226 RERMMKYSYSHRESRNVHRLEESV---PHKENGKESFTLEKGSNTGAYRRKELEM-LNSS 281
             RER M Y+ +H+       L       P K N   ++ LE+      +  + L+  L   
Sbjct:   207 RERAMAYALTHQWQAGTRLLSAHSGFQPDKNNWGWNW-LERWMAVRPWENRFLDSNLRDD 265

Query:   282 AH--ENLVPSEIYIPRHVRLRHMQK-PESQDCVXXXXXXXXXXXXXTKQNAF-GDNDSVP 337
             A   EN +     +P+  +++ + K P + + V                ++  G + S+P
Sbjct:   266 AKLGENGMEQSENVPK-TQIKSVSKMPNTSNLVSGVSSQMTGPCQSDGDSSSPGISSSIP 324

Query:   338 -----NSPVFPTYMAVTESAKAKA--RSMSTPKQR 365
                   S      +AV  +++  A  RS S PK+R
Sbjct:   325 VVSKAKSKPAKDDLAVEVNSRPGAGPRSHSNPKER 359

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	414
pfam13178	105	pfam13178, DUF4005, Protein of unknown function (D	1e-10
pfam00612	21	pfam00612, IQ, IQ calmodulin-binding motif	0.003

>gnl|CDD|221960 pfam13178, DUF4005, Protein of unknown function (DUF4005)

 Score = 57.9 bits (140), Expect = 1e-10
 Identities = 26/59 (44%), Positives = 33/59 (55%)

Query: 307 SQDCVSSPISFPRRSFSRTKQNAFGDNDSVPNSPVFPTYMAVTESAKAKARSMSTPKQR 365
           +   +SS  S   RS       +  D++S  +SP  P YMA TESAKAK RS S P+QR
Sbjct: 2   TPRLLSSSSSKSSRSSPSNPTKSERDDNSSTSSPSLPNYMAATESAKAKVRSQSAPRQR 60

This is a C-terminal region of plant IQ-containing putative calmodulin-binding proteins. Length = 105

>gnl|CDD|201341 pfam00612, IQ, IQ calmodulin-binding motif

 Score = 34.2 bits (80), Expect = 0.003
 Identities = 12/19 (63%), Positives = 16/19 (84%)

Query: 108 AAIKIQSAFRAHLARKALR 126
           AAIKIQ+A+R +LARK  +
Sbjct: 3   AAIKIQAAWRGYLARKRYK 21

Calmodulin-binding motif. Length = 21

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	414
PF13178	102	DUF4005: Protein of unknown function (DUF4005)	99.23
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	97.77
smart00015	26	IQ Short calmodulin-binding motif containing conse	97.21
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	97.05
PTZ00014	821	myosin-A; Provisional	95.54
KOG0520	975	consensus Uncharacterized conserved protein, conta	95.44
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	94.12
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	93.27
COG5022	1463	Myosin heavy chain [Cytoskeleton]	91.26
KOG2128	1401	consensus Ras GTPase-activating protein family - I	89.28
smart00015	26	IQ Short calmodulin-binding motif containing conse	88.04
KOG0520	975	consensus Uncharacterized conserved protein, conta	81.71

>PF13178 DUF4005: Protein of unknown function (DUF4005)

Probab=99.23  E-value=9.8e-12  Score=106.06  Aligned_cols=55  Identities=44%  Similarity=0.573  Sum_probs=43.8

Q ss_pred             CCcchhhhHHHHHhhhccCCCcccccccccccCCCCCCCCccccccCCCC-ccccccC
Q 015032          342 FPTYMAVTESAKAKARSMSTPKQRVAFLDSCFDHSMPYRNEISLRSSYNG-ESVTRDA  398 (414)
Q Consensus       342 ~p~yMa~T~SaKaK~rs~s~pk~r~~~~~~~s~~~~~~k~rlSlpss~n~-~~~~~~~  398 (414)
                      +|+||++|||||||+|++|.||+|++..+..  ...+.++|||||...++ ...+..+
T Consensus        34 ~PsYMa~TeSakAK~RsqSaPrqR~~~~~~~--~~~~~~kR~S~~~~~~~~~~~~~~~   89 (102)
T PF13178_consen   34 LPSYMAATESAKAKARSQSAPRQRPGTPERA--EKQSSKKRLSLPGSSNSGSSSSRSP   89 (102)
T ss_pred             CCCccchhhhhhhhhhccCCcccCCCccccc--cccccccccccCCCCCCCcCCCCCC
Confidence            9999999999999999999999999986543  34567899999976554 4444443

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=97.77  E-value=2.7e-05  Score=48.44  Aligned_cols=20  Identities=55%  Similarity=0.572  Sum_probs=18.5

Q ss_pred             HHHHHHHHhhhhHHHHHHHH
Q 015032          107 LAAIKIQSAFRAHLARKALR  126 (414)
Q Consensus       107 ~AAi~IQtafRGylARral~  126 (414)
                      .|||.||+.||||++|+.|+
T Consensus         2 ~aai~iQ~~~R~~~~Rk~~k   21 (21)
T PF00612_consen    2 KAAIIIQSYWRGYLARKRYK   21 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcC
Confidence            68999999999999999885

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=97.21  E-value=0.00032  Score=45.64  Aligned_cols=22  Identities=50%  Similarity=0.546  Sum_probs=19.9

Q ss_pred             hhHHHHHHHHhhhhHHHHHHHH
Q 015032          105 RNLAAIKIQSAFRAHLARKALR  126 (414)
Q Consensus       105 ee~AAi~IQtafRGylARral~  126 (414)
                      .+.+|+.||+.||||++|+.|.
T Consensus         2 ~~~aa~~IQa~~Rg~~~r~~y~   23 (26)
T smart00015        2 LTRAAIIIQAAWRGYLARKRYK   23 (26)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhh
Confidence            4679999999999999999984

Calmodulin-binding motif.

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=97.05  E-value=0.0013  Score=74.16  Aligned_cols=60  Identities=27%  Similarity=0.219  Sum_probs=50.5

Q ss_pred             hhHHHHHHHHhhhhHHHHHHHHh-hhhHHHHHHhhhhHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 015032          105 RNLAAIKIQSAFRAHLARKALRA-LKGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKR  168 (414)
Q Consensus       105 ee~AAi~IQtafRGylARral~a-LkglVrLQalvRG~~vRrq~~~tlr~~qA~v~iQs~iR~r~  168 (414)
                      ...+++.||+.||||+.|+.|.. .++++-+|+++||.++|+   ..+ ..-+++.||..+|++.
T Consensus       672 l~~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~---~~~-~~~aai~~q~~~r~~~  732 (862)
T KOG0160|consen  672 LSAAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARR---ETE-REAAAIGIQKECRSYL  732 (862)
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH---hhH-HHHHHHHhHHHHHHHH
Confidence            45677889999999999999999 588889999999999999   222 6677888888888775

>PTZ00014 myosin-A; Provisional

Probab=95.54  E-value=0.016  Score=65.60  Aligned_cols=41  Identities=20%  Similarity=0.251  Sum_probs=36.8

Q ss_pred             HHHHHHHHhhhhHHHHHHHHh-hhhHHHHHHhhhhHHHHHHH
Q 015032          107 LAAIKIQSAFRAHLARKALRA-LKGLVKLQAIVRGRAVRRQA  147 (414)
Q Consensus       107 ~AAi~IQtafRGylARral~a-LkglVrLQalvRG~~vRrq~  147 (414)
                      ..++.||.++|||++|+.|.. +.++++||+.+||+++++..
T Consensus       778 ~~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~~~  819 (821)
T PTZ00014        778 PLVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIAEI  819 (821)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            368899999999999999999 78999999999999998753

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=95.44  E-value=0.014  Score=66.58  Aligned_cols=68  Identities=28%  Similarity=0.291  Sum_probs=53.3

Q ss_pred             chhhhhHHHHHHHHhhhhHHHHHHHHh-hhhHHHHHHhhhhHHHHHHHHHHHhh-------cchHHHHHHHHHHHH
Q 015032          101 TARDRNLAAIKIQSAFRAHLARKALRA-LKGLVKLQAIVRGRAVRRQATATLKC-------LPSNGEKQSKVQEKR  168 (414)
Q Consensus       101 ~~~~ee~AAi~IQtafRGylARral~a-LkglVrLQalvRG~~vRrq~~~tlr~-------~qA~v~iQs~iR~r~  168 (414)
                      .......||..||.-||||+.|+.+.. ..=+|++|+-|||+.+|+++......       .-++-++|.-+|+++
T Consensus       805 ~~r~~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk  880 (975)
T KOG0520|consen  805 DDRSDPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFK  880 (975)
T ss_pred             ccccchhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhcccc
Confidence            444567899999999999999999999 57899999999999999999743333       344455555555554

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=94.12  E-value=0.11  Score=58.93  Aligned_cols=63  Identities=25%  Similarity=0.188  Sum_probs=49.4

Q ss_pred             hhhHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Q 015032          104 DRNLAAIKIQSAFRAHLARKALRALKGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKRD  169 (414)
Q Consensus       104 ~ee~AAi~IQtafRGylARral~aLkglVrLQalvRG~~vRrq~~~tlr~~qA~v~iQs~iR~r~~  169 (414)
                      ..-.+++.||..+||+++|+........+.+|..+|++..|+++   .....+++.+|+-+|+...
T Consensus       694 ~~r~~~~~~Q~~~rG~~~r~~~~~~~aai~~q~~~r~~~~r~~y---~~~~~~~~~~qs~~r~~~~  756 (862)
T KOG0160|consen  694 QLRSAVIIIQAYSRGVLARRETEREAAAIGIQKECRSYLNRRRY---RALIPASITIQSGVRAMLA  756 (862)
T ss_pred             HHHHHHHHHhhhhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHh
Confidence            34578889999999999997222346778889999999999988   4556788889999988863

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=93.27  E-value=0.097  Score=32.38  Aligned_cols=19  Identities=26%  Similarity=0.385  Sum_probs=17.2

Q ss_pred             hhHHHHHHhhhhHHHHHHH
Q 015032          129 KGLVKLQAIVRGRAVRRQA  147 (414)
Q Consensus       129 kglVrLQalvRG~~vRrq~  147 (414)
                      +++|.||+.+||+++|+++
T Consensus         2 ~aai~iQ~~~R~~~~Rk~~   20 (21)
T PF00612_consen    2 KAAIIIQSYWRGYLARKRY   20 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc
Confidence            5789999999999999986

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>COG5022 Myosin heavy chain [Cytoskeleton]

Probab=91.26  E-value=0.36  Score=57.31  Aligned_cols=63  Identities=27%  Similarity=0.219  Sum_probs=48.7

Q ss_pred             hhHHHHHHHHhhhhHHHHHHHHh-hhhHHHHHHhhhhHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 015032          105 RNLAAIKIQSAFRAHLARKALRA-LKGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKR  168 (414)
Q Consensus       105 ee~AAi~IQtafRGylARral~a-LkglVrLQalvRG~~vRrq~~~tlr~~qA~v~iQs~iR~r~  168 (414)
                      -...+++||+++||++.||.|.+ ++.+..+|.+.+|..+|+.....+. .....++|..++...
T Consensus       744 ~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~  807 (1463)
T COG5022         744 LDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLVDYELK-WRLFIKLQPLLSLLG  807 (1463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccchH-HHhHHHhhHHhHHHh
Confidence            46789999999999999999888 8999999999999988876643332 445566676666554

>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]

Probab=89.28  E-value=0.84  Score=54.10  Aligned_cols=64  Identities=25%  Similarity=0.267  Sum_probs=52.3

Q ss_pred             hhHHHHHHHHhhhhHHH---H-HHHHh-hhhHHHHHHhhhhHHHHHHHH----HHHhhcchHHHHHHHHHHHH
Q 015032          105 RNLAAIKIQSAFRAHLA---R-KALRA-LKGLVKLQAIVRGRAVRRQAT----ATLKCLPSNGEKQSKVQEKR  168 (414)
Q Consensus       105 ee~AAi~IQtafRGylA---R-ral~a-LkglVrLQalvRG~~vRrq~~----~tlr~~qA~v~iQs~iR~r~  168 (414)
                      ..-..+.||.+.|||+.   + ..+.. .+-||.+|++.||+++|+.+.    -...||.+.+.||+-+|.+.
T Consensus       564 ~~P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~lsrk~~~~~~q~~~~~~~~~i~iqs~~r~f~  636 (1401)
T KOG2128|consen  564 QTPFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGALSRKKYSRKLQYFKDNMTKIIKIQSKIRKFP  636 (1401)
T ss_pred             cCchHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhhhHHHHHHHHHhcc
Confidence            44567899999999993   2 22222 689999999999999999987    34458999999999999987

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=88.04  E-value=0.52  Score=30.47  Aligned_cols=19  Identities=26%  Similarity=0.398  Sum_probs=17.3

Q ss_pred             hhHHHHHHhhhhHHHHHHH
Q 015032          129 KGLVKLQAIVRGRAVRRQA  147 (414)
Q Consensus       129 kglVrLQalvRG~~vRrq~  147 (414)
                      +.++.||+.+||+.+|+++
T Consensus         4 ~aa~~IQa~~Rg~~~r~~y   22 (26)
T smart00015        4 RAAIIIQAAWRGYLARKRY   22 (26)
T ss_pred             HHHHHHHHHHHHHHHHHhh
Confidence            5789999999999999987

Calmodulin-binding motif.

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=81.71  E-value=2.1  Score=49.45  Aligned_cols=62  Identities=23%  Similarity=0.180  Sum_probs=43.6

Q ss_pred             HHHHHHHhhhhHHHHHHHHhh--------hhHH---HHHHhhhhHHHHHHH----------------------HHHHhhc
Q 015032          108 AAIKIQSAFRAHLARKALRAL--------KGLV---KLQAIVRGRAVRRQA----------------------TATLKCL  154 (414)
Q Consensus       108 AAi~IQtafRGylARral~aL--------kglV---rLQalvRG~~vRrq~----------------------~~tlr~~  154 (414)
                      -+|+||+++|||-.|+.|+.+        +-+.   ++|.-+||+..|.-.                      ....+--
T Consensus       835 p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~~~e~~~~a~t~~e~~yd~yKq~~~~~~~r~~  914 (975)
T KOG0520|consen  835 PIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRALFEEQETAATVIEDCYDFYKQLRKQTEERLT  914 (975)
T ss_pred             ccccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhcccccccchhccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            489999999999999999884        1121   237777777655432                      2333446


Q ss_pred             chHHHHHHHHHHHHH
Q 015032          155 PSNGEKQSKVQEKRD  169 (414)
Q Consensus       155 qA~v~iQs~iR~r~~  169 (414)
                      +|+++||+.+|....
T Consensus       915 ~A~~~VQsm~rs~~a  929 (975)
T KOG0520|consen  915 RAVVRVQSMFRSPKA  929 (975)
T ss_pred             HHHHHHHHHhcCHHH
Confidence            789999999888763

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	414
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	2e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-07
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	4e-06
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	2e-05
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	7e-05
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	2e-04
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	8e-04
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	9e-04

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995

 Score = 55.4 bits (134), Expect = 2e-08
 Identities = 38/268 (14%), Positives = 81/268 (30%), Gaps = 36/268 (13%)

Query: 31  KWAFGRLK--FRQYPALTAPQISLNEATEEQRKHALNVAMATAVAAEAAVAAAHAAAEVV 88
            +  G+ K  FR      A  +      EE+R      +                A E+V
Sbjct: 732 LYRVGQSKIFFR------AGVL---AQLEEERASEQTKS-----------DYLKRANELV 771

Query: 89  RLIGTSKSYHHLTARDRNLAAIKIQSAFRAHLARKALRAL---KGLVKLQAIVRGRAVRR 145
           + I   ++      RD   +   +QS   AH   K        + + +L+AI      + 
Sbjct: 772 QWINDKQASLES--RDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKL 829

Query: 146 QATATLKCLPSNGEKQSKVQEKRDAVCKYSEHKKCIRSKEELEEKEI-----KPEFIDQR 200
           +       +   G   +++     A+ K  +        E   +K+I     K   I ++
Sbjct: 830 RLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKK 889

Query: 201 SWDYSILSKEDMEAIW----LRKQEAAIKRERMMKYSYSHRESRNVHRLEESVPHKENGK 256
             +++      + +      +   +A +K            E ++   L   +       
Sbjct: 890 LENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTELN 949

Query: 257 ESFTLEKGSNTGAYRRKELEMLNSSAHE 284
            +   E       +  ++   + SSA  
Sbjct: 950 YNGVPELTERKDTFFAQQWTGVKSSAET 977

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.4 bits (122), Expect = 4e-07
 Identities = 50/353 (14%), Positives = 101/353 (28%), Gaps = 93/353 (26%)

Query: 100 LTARDRNLAAIKIQSAFRAHLARKALRALKGLVKLQAI--------VRGRAVRRQATATL 151
           LT R + +    + +A   H++         L   +           R + + R+    L
Sbjct: 270 LTTRFKQVTDF-LSAATTTHISLDHHS--MTLTPDEVKSLLLKYLDCRPQDLPREV---L 323

Query: 152 KCLPSN----GEKQSKVQEKRDAVC--KYSEHKKCIR-------SKEELEEKEIKPEFID 198
              P       E        RD +      +H  C +       S   LE  E +  F  
Sbjct: 324 TTNPRRLSIIAE------SIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDR 377

Query: 199 ---------------QRSWDYSILSKEDMEAIW--LRKQEAAIKRERMMKYSYS--HRES 239
                             W   I  K D+  +   L K     K+ +    S    + E 
Sbjct: 378 LSVFPPSAHIPTILLSLIWFDVI--KSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLEL 435

Query: 240 RNVHRLEESVPHKENGKESFTLEKGSNTGAYRRKELEMLNSSAHENLVPSEI--YIPRHV 297
           + V    E   H+        ++       Y   +     +   ++L+P  +  Y   H+
Sbjct: 436 K-VKLENEYALHRS------IVDH------YNIPK-----TFDSDDLIPPYLDQYFYSHI 477

Query: 298 RLRHMQKPESQDCVSSPISFPRR----SFSRTKQNAFGDNDSVPNSPV-----FPTYMA- 347
              H++  E  + ++    F        F   K        +   S +        Y   
Sbjct: 478 -GHHLKNIEHPERMT---LFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPY 533

Query: 348 VTESAKAKARSMSTPKQRVAFLDSCFDHSM--PYRNEISLRSSYNGESVTRDA 398
           + ++     R ++       FL    ++ +   Y + + +      E++  +A
Sbjct: 534 ICDNDPKYERLVNAILD---FLPKIEENLICSKYTDLLRIALMAEDEAIFEEA 583

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58

 Score = 42.9 bits (102), Expect = 4e-06
 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 1/44 (2%)

Query: 105 RNLAAIKIQSAFRAHLARKA-LRALKGLVKLQAIVRGRAVRRQA 147
              A I+IQ   R  L RK  L   +  + +Q  VRG   R  A
Sbjct: 4   LRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYA 47

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 45.9 bits (109), Expect = 2e-05
 Identities = 28/136 (20%), Positives = 57/136 (41%), Gaps = 14/136 (10%)

Query: 105 RNLAAIKIQSAFRAHLARKALRALK-GLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSK 163
           R  AAI IQ   R ++ RK  + ++   + LQA++RG  VR +    L+       K   
Sbjct: 815 RTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLR-----EHKSII 869

Query: 164 VQEKRDAVCKYSEHKKCIRSKEELE--------EKEIKPEFIDQRSWDYSILSKEDMEAI 215
           +Q+          + + +++   L+        ++E+K   I+ RS +        +E  
Sbjct: 870 IQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENK 929

Query: 216 WLRKQEAAIKRERMMK 231
            ++ Q    ++ +  K
Sbjct: 930 IMQLQRKIDEQNKEYK 945

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010

 Score = 43.9 bits (104), Expect = 7e-05
 Identities = 42/294 (14%), Positives = 90/294 (30%), Gaps = 36/294 (12%)

Query: 31   KWAFGRLK--FRQYPALTAPQISLNEATEEQRKHALNVAMATAVAAEAAVAAAHAAAEVV 88
            ++ FG  K  FR      A Q++     EE R+  L                   A E+V
Sbjct: 736  QYRFGITKIFFR------AGQLA---RIEEAREQRLGSEQTK-------SDYLKRANELV 779

Query: 89   RLIGTSKSYHHLTARDRNLAAIKIQSAFRAHLARKALRAL---KGLVKLQAIVRGRAVRR 145
            + I   ++   L +RD   +   +QS   AH   K        + + +L+AI      + 
Sbjct: 780  QWINDKQAS--LESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKL 837

Query: 146  QATATLKCLPSNGEKQSKVQEKRDAVCKYSEHKKCIRSKEELEEKEIKPEFIDQRSW--- 202
            +       +   G   +++     A+ K  +        E   +K+I    + Q+     
Sbjct: 838  RLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKI--AVLLQKYNRIL 895

Query: 203  ----DYSILSKEDMEAI----WLRKQEAAIKRERMMKYSYSHRESRNVHRLEESVPHKEN 254
                +++      + +      +   +A +K            E ++   L   +     
Sbjct: 896  KKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTE 955

Query: 255  GKESFTLEKGSNTGAYRRKELEMLNSSAHENLVPSEIYIPRHVRLRHMQKPESQ 308
               +   E       +  ++   + SSA          + R  ++  +      
Sbjct: 956  LNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQKIEDLHHHHHH 1009

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 41.1 bits (95), Expect = 2e-04
 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 7/36 (19%)

Query: 24 EKKS-KRWKWAFGRLKFRQYPALTAPQISLNEATEE 58
          EK++ K+ +     LK   Y   +AP +++  AT E
Sbjct: 18 EKQALKKLQ---ASLKL--YADDSAPALAIK-ATME 47

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 41.0 bits (96), Expect = 8e-04
 Identities = 28/165 (16%), Positives = 55/165 (33%), Gaps = 10/165 (6%)

Query: 103 RDRNL--AAIKIQSAFRAHLARKALRALK----GLVKLQAIVRGRAVRRQATATLKCLPS 156
           RD  +    I  Q+  R +LARKA    +     +  +Q  VR                 
Sbjct: 787 RDLKITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHWPWMXLFFXI 846

Query: 157 NG-EKQSKVQEKRDAVCKYSEHKKCIRSKEELEEKEIKPEF---IDQRSWDYSILSKEDM 212
               K ++ +E+  A  +  +  K  + K E E KE++ +     ++++     L  E  
Sbjct: 847 XPLLKVTRQEEEMQAKDEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAETE 906

Query: 213 EAIWLRKQEAAIKRERMMKYSYSHRESRNVHRLEESVPHKENGKE 257
                 +    +  ++       H     +   EE     +  K+
Sbjct: 907 LYAEAEEMRVRLAAKKQELEEILHEMEARIEEEEERSQQLQAEKK 951

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837

 Score = 40.8 bits (96), Expect = 9e-04
 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 6/50 (12%)

Query: 103 RDRNL--AAIKIQSAFRAHLARKALRALK----GLVKLQAIVRGRAVRRQ 146
           RD  L       Q+  R +L RKA + L+    GL  +Q  +R   V R 
Sbjct: 774 RDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN 823

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	414
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	98.91
1n2d_C	48	IQ2 and IQ3 motifs from MYO2P, A class V myosin; p	98.64
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	98.38
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	98.33
2l53_B	31	CAM, voltage-gated sodium channel type V alpha iso	97.85
2kxw_B	27	Sodium channel protein type 2 subunit alpha; actio	97.71
1n2d_C	48	IQ2 and IQ3 motifs from MYO2P, A class V myosin; p	97.38
1wdc_A	64	Scallop myosin; calcium binding protein, muscle pr	96.68
2bl0_A	63	Major plasmodial myosin heavy chain; muscle protei	96.53
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	96.22
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	96.17
1wdc_A	64	Scallop myosin; calcium binding protein, muscle pr	96.09
2bl0_A	63	Major plasmodial myosin heavy chain; muscle protei	96.09
3gn4_A	148	Myosin-VI; unconventional myosin, motility, lever	95.68
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	94.39
4dck_A	168	Sodium channel protein type 5 subunit alpha; IQ-mo	91.15
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	87.18
1w7j_A	795	Myosin VA; motor protein, unconventional myosin, m	82.83
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	80.13

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}

Probab=98.91  E-value=1.9e-09  Score=81.19  Aligned_cols=53  Identities=28%  Similarity=0.358  Sum_probs=45.0

Q ss_pred             hhhHHHHHHHHhhhhHHHHHHHHhh-hhHHHHHHhhhhHHHHHHHHHHHhhcchH
Q 015032          104 DRNLAAIKIQSAFRAHLARKALRAL-KGLVKLQAIVRGRAVRRQATATLKCLPSN  157 (414)
Q Consensus       104 ~ee~AAi~IQtafRGylARral~aL-kglVrLQalvRG~~vRrq~~~tlr~~qA~  157 (414)
                      ..+.||+.||+.||||++|+.|..+ .++|.||+.+||+.+|+.+. .++...|+
T Consensus         3 ~~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~-~~r~~~aA   56 (58)
T 2ix7_C            3 KLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAK-FLRRTKAA   56 (58)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCc
Confidence            4678999999999999999999995 69999999999999999994 44443433

>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}

Probab=98.64  E-value=4.1e-08  Score=71.04  Aligned_cols=41  Identities=24%  Similarity=0.316  Sum_probs=37.5

Q ss_pred             HHHHHHHHhhhhHHHHHHHHhh-h--hHHHHHHhhhhHHHHHHH
Q 015032          107 LAAIKIQSAFRAHLARKALRAL-K--GLVKLQAIVRGRAVRRQA  147 (414)
Q Consensus       107 ~AAi~IQtafRGylARral~aL-k--glVrLQalvRG~~vRrq~  147 (414)
                      .|||.||+.+|||++|+.+..+ +  ++|.||+.+||+.+|+.+
T Consensus         4 ~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y   47 (48)
T 1n2d_C            4 QAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV   47 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence            4899999999999999999985 3  899999999999999975

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=98.38  E-value=4.3e-07  Score=102.57  Aligned_cols=65  Identities=28%  Similarity=0.204  Sum_probs=54.8

Q ss_pred             hhhhHHHHHHHHhhhhHHHHHHHHh-hhhHHHHHHhhhhHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 015032          103 RDRNLAAIKIQSAFRAHLARKALRA-LKGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKR  168 (414)
Q Consensus       103 ~~ee~AAi~IQtafRGylARral~a-LkglVrLQalvRG~~vRrq~~~tlr~~qA~v~iQs~iR~r~  168 (414)
                      .+++.||+.||+.||||++|+.|.. ..++|.||+.+||+.+|+++. .++...+++.||+.+|++.
T Consensus       813 lr~~~AAi~IQs~~Rg~~~Rk~y~~lr~aai~IQs~~Rg~laRr~~~-~lr~~~aav~IQ~~~Rg~l  878 (1080)
T 2dfs_A          813 LRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQ-MMLREHKSIIIQKHVRGWL  878 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHTTTH
T ss_pred             cccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            3578899999999999999999999 689999999999999999884 4455567777777777765

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=98.33  E-value=8.9e-07  Score=100.05  Aligned_cols=64  Identities=25%  Similarity=0.198  Sum_probs=58.2

Q ss_pred             hHHHHHHHHhhhhHHHHHHHHh-hhhHHHHHHhhhhHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Q 015032          106 NLAAIKIQSAFRAHLARKALRA-LKGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKRDA  170 (414)
Q Consensus       106 e~AAi~IQtafRGylARral~a-LkglVrLQalvRG~~vRrq~~~tlr~~qA~v~iQs~iR~r~~~  170 (414)
                      ..||+.||+.||||++|+.|+. ..+++.||+.+||+.+|+.+ ..++...|++.||+.+|++..+
T Consensus       768 ~~aa~~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~-~~lr~~~AAi~IQs~~Rg~~~R  832 (1080)
T 2dfs_A          768 RAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYA-TFLRRTRAAIIIQKFQRMYVVR  832 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcc-cccccchhHHHHHHHHhhHHHH
Confidence            5799999999999999999999 58999999999999999998 5567889999999999999743

>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}

Probab=97.85  E-value=6.1e-06  Score=55.70  Aligned_cols=25  Identities=36%  Similarity=0.626  Sum_probs=21.9

Q ss_pred             hhhhHHHHHHHHhhhhHHHHHHHHh
Q 015032          103 RDRNLAAIKIQSAFRAHLARKALRA  127 (414)
Q Consensus       103 ~~ee~AAi~IQtafRGylARral~a  127 (414)
                      ..||.||+.||.|||+||.|+.+..
T Consensus         3 k~Ee~aA~vIQrA~R~yl~rr~~~~   27 (31)
T 2l53_B            3 GSEEVSAMVIQRAFRRHLLQRSLKH   27 (31)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            3689999999999999999987653

>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}

Probab=97.71  E-value=1.4e-05  Score=52.40  Aligned_cols=22  Identities=32%  Similarity=0.531  Sum_probs=19.7

Q ss_pred             hhhhHHHHHHHHhhhhHHHHHH
Q 015032          103 RDRNLAAIKIQSAFRAHLARKA  124 (414)
Q Consensus       103 ~~ee~AAi~IQtafRGylARra  124 (414)
                      ..||.||+.||.|||+||.|+.
T Consensus         3 k~Ee~aA~vIQrA~R~yl~~~~   24 (27)
T 2kxw_B            3 KQEEVSAIVIQRAYRRYLLKQK   24 (27)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhh
Confidence            3689999999999999999864

>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}

Probab=97.38  E-value=0.00027  Score=50.76  Aligned_cols=40  Identities=13%  Similarity=0.093  Sum_probs=35.3

Q ss_pred             hhHHHHHHhhhhHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Q 015032          129 KGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKRD  169 (414)
Q Consensus       129 kglVrLQalvRG~~vRrq~~~tlr~~qA~v~iQs~iR~r~~  169 (414)
                      +++|.||+.+||.++|+++ ..++...|++.||+.+|++..
T Consensus         4 ~a~i~iQ~~~Rg~l~R~~~-~~~~~~~aai~IQ~~~Rg~~~   43 (48)
T 1n2d_C            4 QAIKYLQNNIKGFIIRQRV-NDEMKVNCATLLQAAYRGHSI   43 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhHHH
Confidence            5789999999999999999 455667899999999999874

>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A

Probab=96.68  E-value=0.0027  Score=48.35  Aligned_cols=39  Identities=33%  Similarity=0.331  Sum_probs=21.0

Q ss_pred             HHHHHHHHhhhhHHHHHHHHhh----hhHHHHHHhhhhHHHHH
Q 015032          107 LAAIKIQSAFRAHLARKALRAL----KGLVKLQAIVRGRAVRR  145 (414)
Q Consensus       107 ~AAi~IQtafRGylARral~aL----kglVrLQalvRG~~vRr  145 (414)
                      ..++.||+..|||++|+.|..+    .++..||.-+|++..++
T Consensus         7 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~   49 (64)
T 1wdc_A            7 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR   49 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            3466666666666666666652    23334444444444443

>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=96.53  E-value=0.0026  Score=48.42  Aligned_cols=37  Identities=19%  Similarity=0.092  Sum_probs=17.5

Q ss_pred             HHHHHhhhhHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 015032          132 VKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKR  168 (414)
Q Consensus       132 VrLQalvRG~~vRrq~~~tlr~~qA~v~iQs~iR~r~  168 (414)
                      +.||+.+||+++|+.+...+....|+..||..+|++.
T Consensus         8 t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~   44 (63)
T 2bl0_A            8 KVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYL   44 (63)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3344444444444444334444445555666666554

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}

Probab=96.22  E-value=0.0064  Score=45.20  Aligned_cols=38  Identities=16%  Similarity=0.174  Sum_probs=33.0

Q ss_pred             hhHHHHHHhhhhHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Q 015032          129 KGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKRD  169 (414)
Q Consensus       129 kglVrLQalvRG~~vRrq~~~tlr~~qA~v~iQs~iR~r~~  169 (414)
                      ..+|.||+.+||+.+|+.+.   +...+++.||+.+|++..
T Consensus         6 ~aai~IQ~~~Rg~~~Rk~~~---~~r~aai~IQ~~~Rg~~a   43 (58)
T 2ix7_C            6 AACIRIQKTIRGWLLRKRYL---CMQRAAITVQRYVRGYQA   43 (58)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Confidence            67899999999999999993   334699999999999874

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=96.17  E-value=0.0045  Score=68.53  Aligned_cols=42  Identities=31%  Similarity=0.292  Sum_probs=35.2

Q ss_pred             hHHHHHHHHhhhhHHHHHHHHhh----hhHHHHHHhhhhHHHHHHH
Q 015032          106 NLAAIKIQSAFRAHLARKALRAL----KGLVKLQAIVRGRAVRRQA  147 (414)
Q Consensus       106 e~AAi~IQtafRGylARral~aL----kglVrLQalvRG~~vRrq~  147 (414)
                      ..+|+.||+.+|||++|+.|..+    .+++.||.-+||+++||..
T Consensus       779 ~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~  824 (837)
T 1kk8_A          779 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW  824 (837)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcch
Confidence            45788999999999999999875    6788888888888888765

>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A

Probab=96.09  E-value=0.0074  Score=45.89  Aligned_cols=40  Identities=18%  Similarity=0.092  Sum_probs=36.5

Q ss_pred             hhHHHHHHhhhhHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 015032          129 KGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKR  168 (414)
Q Consensus       129 kglVrLQalvRG~~vRrq~~~tlr~~qA~v~iQs~iR~r~  168 (414)
                      .-++.||+.+||+++|+.+...+....|+..||..+|++.
T Consensus         7 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~   46 (64)
T 1wdc_A            7 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWL   46 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4578999999999999999988888899999999999886

>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=96.09  E-value=0.0068  Score=46.02  Aligned_cols=41  Identities=20%  Similarity=0.117  Sum_probs=34.9

Q ss_pred             HHHHHHHHhhhhHHHHHHHHhh----hhHHHHHHhhhhHHHHHHH
Q 015032          107 LAAIKIQSAFRAHLARKALRAL----KGLVKLQAIVRGRAVRRQA  147 (414)
Q Consensus       107 ~AAi~IQtafRGylARral~aL----kglVrLQalvRG~~vRrq~  147 (414)
                      ..++.||+..|||++|+.|..+    .++..||.-+|++..++.-
T Consensus         5 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~w   49 (63)
T 2bl0_A            5 EIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKNW   49 (63)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence            4689999999999999999985    5777889999999887643

>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}

Probab=95.68  E-value=0.0099  Score=53.17  Aligned_cols=35  Identities=31%  Similarity=0.500  Sum_probs=30.3

Q ss_pred             hhhHHHHHHHHhhhhHHHHHHHHh-hhhHHHHHHhh
Q 015032          104 DRNLAAIKIQSAFRAHLARKALRA-LKGLVKLQAIV  138 (414)
Q Consensus       104 ~ee~AAi~IQtafRGylARral~a-LkglVrLQalv  138 (414)
                      -...|+|+||++.||||+|+.++- +.|++++.+|.
T Consensus        43 yR~~~~i~iQktvR~~L~rkkhkPRi~g~~kv~~L~   78 (148)
T 3gn4_A           43 YRAEACIKMQKTIRMWLCKRRHKPRIDGLVKVGTLK   78 (148)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            367789999999999999999998 78888887664

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=94.39  E-value=0.032  Score=63.59  Aligned_cols=42  Identities=26%  Similarity=0.173  Sum_probs=37.4

Q ss_pred             hHHHHHHHHhhhhHHHHHHHHhh----hhHHHHHHhhhhHHHHHHH
Q 015032          106 NLAAIKIQSAFRAHLARKALRAL----KGLVKLQAIVRGRAVRRQA  147 (414)
Q Consensus       106 e~AAi~IQtafRGylARral~aL----kglVrLQalvRG~~vRrq~  147 (414)
                      ..+++.||+.+|||++|+.|..+    .+++.||..+||++.++.+
T Consensus       792 ~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~~  837 (1184)
T 1i84_S          792 TDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHW  837 (1184)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            36789999999999999999985    6899999999999998753

>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A

Probab=91.15  E-value=0.13  Score=46.72  Aligned_cols=26  Identities=35%  Similarity=0.640  Sum_probs=23.0

Q ss_pred             hhhhhHHHHHHHHhhhhHHHHHHHHh
Q 015032          102 ARDRNLAAIKIQSAFRAHLARKALRA  127 (414)
Q Consensus       102 ~~~ee~AAi~IQtafRGylARral~a  127 (414)
                      ...|+.||+.||.+||.|+.|+.+..
T Consensus       126 ~~~e~~aA~~IQra~R~~~~r~~~~~  151 (168)
T 4dck_A          126 RKHEEVSAMVIQRAFRRHLLQRSLKH  151 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccc
Confidence            45789999999999999999988775

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=87.18  E-value=0.95  Score=50.17  Aligned_cols=41  Identities=17%  Similarity=0.067  Sum_probs=35.9

Q ss_pred             hhHHHHHHhhhhHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Q 015032          129 KGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKRD  169 (414)
Q Consensus       129 kglVrLQalvRG~~vRrq~~~tlr~~qA~v~iQs~iR~r~~  169 (414)
                      +-++.||+.+||+++|+.+...+....|++.||..+|++..
T Consensus       780 ~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~  820 (837)
T 1kk8_A          780 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLV  820 (837)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45788999999999999997766667899999999999873

>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A

Probab=82.83  E-value=0.69  Score=50.96  Aligned_cols=24  Identities=33%  Similarity=0.494  Sum_probs=20.9

Q ss_pred             hHHHHHHHHhhhhHHHHHHHHhhh
Q 015032          106 NLAAIKIQSAFRAHLARKALRALK  129 (414)
Q Consensus       106 e~AAi~IQtafRGylARral~aLk  129 (414)
                      ..+|+.||+.+|||++|+.|+.++
T Consensus       768 ~~~~~~iQ~~~Rg~l~R~~~~~~r  791 (795)
T 1w7j_A          768 RAACIRIQKTIRGWLMRKKYMRMR  791 (795)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            458999999999999999999854

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=80.13  E-value=2.4  Score=48.25  Aligned_cols=40  Identities=23%  Similarity=0.110  Sum_probs=35.6

Q ss_pred             hhHHHHHHhhhhHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 015032          129 KGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKR  168 (414)
Q Consensus       129 kglVrLQalvRG~~vRrq~~~tlr~~qA~v~iQs~iR~r~  168 (414)
                      .-++.||+.+||+++|+.+...+....|++.||+.+|++.
T Consensus       793 ~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~  832 (1184)
T 1i84_S          793 DVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFM  832 (1184)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5678899999999999999777777889999999999986

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	414
d1kk8a2	789	c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain	4e-04
d2mysa2	794	c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain	9e-04

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 40.5 bits (94), Expect = 4e-04
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 6/49 (12%)

Query: 103 RDRNL--AAIKIQSAFRAHLARKALRALK----GLVKLQAIVRGRAVRR 145
           RD  L       Q+  R +L RKA + L+    GL  +Q  +R   V R
Sbjct: 726 RDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR 774

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 39.3 bits (91), Expect = 9e-04
 Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 6/49 (12%)

Query: 103 RDRNL--AAIKIQSAFRAHLARKALRAL----KGLVKLQAIVRGRAVRR 145
           RD  L       Q+  R  L R   RA+    + +  +Q  VR     +
Sbjct: 730 RDDKLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVK 778

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	414
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	96.68
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	96.48
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	90.88
d1w7ja2	730	Myosin S1, motor domain {Chicken (Gallus gallus),	87.51
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	85.73

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=96.68  E-value=0.00074  Score=71.50  Aligned_cols=43  Identities=30%  Similarity=0.296  Sum_probs=37.7

Q ss_pred             hhHHHHHHHHhhhhHHHHHHHHhhh----hHHHHHHhhhhHHHHHHH
Q 015032          105 RNLAAIKIQSAFRAHLARKALRALK----GLVKLQAIVRGRAVRRQA  147 (414)
Q Consensus       105 ee~AAi~IQtafRGylARral~aLk----glVrLQalvRG~~vRrq~  147 (414)
                      -..+|+.||+.||||++|+.|+.++    .++.||..+||+++||.+
T Consensus       730 l~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~  776 (789)
T d1kk8a2         730 LSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW  776 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence            3568999999999999999999864    688899999999999866

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=96.48  E-value=0.001  Score=70.44  Aligned_cols=42  Identities=21%  Similarity=0.163  Sum_probs=36.6

Q ss_pred             hHHHHHHHHhhhhHHHHHHHHhh----hhHHHHHHhhhhHHHHHHH
Q 015032          106 NLAAIKIQSAFRAHLARKALRAL----KGLVKLQAIVRGRAVRRQA  147 (414)
Q Consensus       106 e~AAi~IQtafRGylARral~aL----kglVrLQalvRG~~vRrq~  147 (414)
                      ..+|+.||+.+|||++|+.|+.+    .+++.||+.+||+++||.+
T Consensus       735 ~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~  780 (794)
T d2mysa2         735 AEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHW  780 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            46899999999999999999763    5789999999999988865

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=90.88  E-value=0.17  Score=53.01  Aligned_cols=42  Identities=21%  Similarity=0.024  Sum_probs=36.9

Q ss_pred             hhhHHHHHHhhhhHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Q 015032          128 LKGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKRD  169 (414)
Q Consensus       128 LkglVrLQalvRG~~vRrq~~~tlr~~qA~v~iQs~iR~r~~  169 (414)
                      .+.++.||+.+||+++|+.+...+....|++.||+.+|++..
T Consensus       735 ~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~  776 (794)
T d2mysa2         735 AEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMN  776 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            366789999999999999998777777899999999999863

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

Probab=87.51  E-value=0.15  Score=52.73  Aligned_cols=25  Identities=32%  Similarity=0.445  Sum_probs=20.4

Q ss_pred             hhHHHHHHHHhhhhHHHHHHHHhhh
Q 015032          105 RNLAAIKIQSAFRAHLARKALRALK  129 (414)
Q Consensus       105 ee~AAi~IQtafRGylARral~aLk  129 (414)
                      ...+|++||+.+|||++||.|..+|
T Consensus       705 l~~~~~~iQ~~~R~~l~Rk~~~r~r  729 (730)
T d1w7ja2         705 LRAACIRIQKTIRGWLMRKKYMRMR  729 (730)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3457899999999999999887653

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=85.73  E-value=0.57  Score=48.80  Aligned_cols=41  Identities=17%  Similarity=0.067  Sum_probs=34.3

Q ss_pred             hhHHHHHHhhhhHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Q 015032          129 KGLVKLQAIVRGRAVRRQATATLKCLPSNGEKQSKVQEKRD  169 (414)
Q Consensus       129 kglVrLQalvRG~~vRrq~~~tlr~~qA~v~iQs~iR~r~~  169 (414)
                      +.++.||+.+||+.+|+++........+++.||+.+|++..
T Consensus       732 ~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~  772 (789)
T d1kk8a2         732 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLV  772 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56788899999999999996555556689999999999874