Citrus Sinensis ID: 015058
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 414 | 2.2.26 [Sep-21-2011] | |||||||
| Q9BT22 | 464 | Chitobiosyldiphosphodolic | yes | no | 0.835 | 0.745 | 0.414 | 4e-68 | |
| Q5R7A2 | 464 | Chitobiosyldiphosphodolic | yes | no | 0.838 | 0.747 | 0.410 | 6e-67 | |
| Q921Q3 | 482 | Chitobiosyldiphosphodolic | yes | no | 0.842 | 0.724 | 0.412 | 8e-67 | |
| P90522 | 493 | Chitobiosyldiphosphodolic | yes | no | 0.859 | 0.722 | 0.371 | 5e-65 | |
| O13933 | 424 | Chitobiosyldiphosphodolic | yes | no | 0.756 | 0.738 | 0.380 | 2e-55 | |
| Q6C3K2 | 463 | Chitobiosyldiphosphodolic | yes | no | 0.765 | 0.684 | 0.377 | 4e-53 | |
| Q75BA5 | 471 | Chitobiosyldiphosphodolic | yes | no | 0.775 | 0.681 | 0.334 | 1e-44 | |
| P16661 | 449 | Chitobiosyldiphosphodolic | yes | no | 0.785 | 0.723 | 0.335 | 9e-44 | |
| Q59Q79 | 456 | Chitobiosyldiphosphodolic | N/A | no | 0.760 | 0.690 | 0.320 | 3e-43 | |
| Q6CVU2 | 447 | Chitobiosyldiphosphodolic | yes | no | 0.770 | 0.713 | 0.321 | 1e-42 |
| >sp|Q9BT22|ALG1_HUMAN Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Homo sapiens GN=ALG1 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 258 bits (660), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 160/386 (41%), Positives = 221/386 (57%), Gaps = 40/386 (10%)
Query: 3 RRGRAC----VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHI 58
RRGRA VVLGD+GRSPRMQY ALSLA V ++ + SKPH +L++ I I
Sbjct: 27 RRGRAARHVVAVVLGDVGRSPRMQYHALSLAMH-GFSVTLLGFCNSKPHDELLQNNRIQI 85
Query: 59 HTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVA 118
+T+ ++ G P+V + +K ++Q LLW L + +FL QNPP +P++
Sbjct: 86 VGLTELQSLAVG-PRVFQ---YGVKVVLQAMYLLWKLMWREPGAYIFL-QNPPGLPSIAV 140
Query: 119 VKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178
+ L S ++DWHN+GY+++ L G V + +W EK++G++++ LCVT AM+
Sbjct: 141 CWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVTNAMR 200
Query: 179 HELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238
+LA NW I+A +YD+P FF T L+ +H LF +L +H P + + E
Sbjct: 201 EDLADNWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGS-MHSPFRAR----SEPEDPVT 255
Query: 239 DETIFT---SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDD 295
+ + FT + +G+ L+ RPAL+VSSTSWT DEDF ILL A
Sbjct: 256 ERSAFTERDAGSGLVTRLR-ERPALLVSSTSWTEDEDFSILLAAL--------------- 299
Query: 296 STNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDY 355
E F + DG P L+ +ITGKGP +E Y I + + + T WL AEDY
Sbjct: 300 ----EKFEQLTLDGHN--LPSLVCVITGKGPLREYYSRLIHQKHFQHIQVCTPWLEAEDY 353
Query: 356 PLLLGSADLGVCLHTSSSGLDLPMKV 381
PLLLGSADLGVCLHTSSSGLDLPMKV
Sbjct: 354 PLLLGSADLGVCLHTSSSGLDLPMKV 379
|
Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Homo sapiens (taxid: 9606) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 4EC: 2 |
| >sp|Q5R7A2|ALG1_PONAB Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Pongo abelii GN=ALG1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 254 bits (650), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 158/385 (41%), Positives = 218/385 (56%), Gaps = 38/385 (9%)
Query: 3 RRGRAC----VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHI 58
RRGR VVLGD+GRSPRMQY ALSLA V ++ + SKPH +L++ I I
Sbjct: 27 RRGRTARHVVAVVLGDVGRSPRMQYHALSLAMH-GFSVTLLGFCNSKPHDELLQNNRIQI 85
Query: 59 HTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVA 118
+T+ ++ G P+V + +K + Q LLW L + +FL QNPP +P++
Sbjct: 86 VGLTELQSLAVG-PRVFQ---YGVKVVFQAMYLLWKLMWREPGAYIFL-QNPPGLPSIAV 140
Query: 119 VKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178
+ L S ++DWHN+GY+++ L G V + +W E+++G++++ LCVT AM+
Sbjct: 141 CWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYERFFGRLSHLNLCVTNAMR 200
Query: 179 HELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238
+LA+NW I+A +YD+P FF T L+ +H LF +L H P + + E
Sbjct: 201 EDLAENWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGGT-HSPFRAR----SEPEDPAT 255
Query: 239 DETIFTSL-AGIDVFLK-PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS 296
+ + FT AG + + RPAL+VSSTSWT DEDF ILL A
Sbjct: 256 ERSAFTERDAGSGLVTRLHERPALLVSSTSWTEDEDFSILLAAL---------------- 299
Query: 297 TNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYP 356
E F + DG + P L+ +ITGKGP +E Y I + + + T WL AEDYP
Sbjct: 300 ---EKFEQLTLDG--HSLPSLVCVITGKGPLREYYSHLIHQKHFQHIQVCTPWLEAEDYP 354
Query: 357 LLLGSADLGVCLHTSSSGLDLPMKV 381
LLLGSADLGVCLHTSSSGLDLPMKV
Sbjct: 355 LLLGSADLGVCLHTSSSGLDLPMKV 379
|
Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Pongo abelii (taxid: 9601) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|Q921Q3|ALG1_MOUSE Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Mus musculus GN=Alg1 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 254 bits (649), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 157/381 (41%), Positives = 218/381 (57%), Gaps = 32/381 (8%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GR VVVLGD+GRSPRMQY ALSLA Q V ++ + SKP +L++ I I +
Sbjct: 30 GRARHMVVVVLGDVGRSPRMQYHALSLA-QSGFSVTLLGFYNSKPRDELLQNDRIRIVKL 88
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
T + G P++L+ +K + Q LLW + + +FL QNPP +P + +
Sbjct: 89 TDLRGLGAG-PRILQ---YGVKVVFQAVYLLWKMMRMDPAAYIFL-QNPPGLPAIAVCWF 143
Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
+ S ++DWHN+GY+++ L G R V + +W EK++G++++ LCVT AM+ +L
Sbjct: 144 VGCICGSKLVIDWHNYGYSIMGLVHGPRHPIVLLAKWYEKFFGRLSHLNLCVTNAMREDL 203
Query: 182 AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGM-EGQKADE 240
A+NW ++A LYD+P FF T L+ +HELF +L+ H Q C + +++
Sbjct: 204 AENWCVRAVTLYDKPASFFKETPLDLQHELFMKLS---HTYSPFQSCSDPSHPDTERSAF 260
Query: 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEE 300
T +G+ L RPAL+VSSTSWT DEDF ILL A ++++ L D
Sbjct: 261 TERDCQSGVVRRLH-GRPALLVSSTSWTEDEDFSILLRALEKFEQQA---LTGDS----- 311
Query: 301 VFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG 360
P L+ +ITGKGP +E Y I + L+ V F T WL AEDYPLLLG
Sbjct: 312 -------------LPSLVCVITGKGPLREHYRHLISQKHLQHVRFCTPWLEAEDYPLLLG 358
Query: 361 SADLGVCLHTSSSGLDLPMKV 381
SADLGVCLH SSSGLDLPMKV
Sbjct: 359 SADLGVCLHMSSSGLDLPMKV 379
|
Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|P90522|ALG1_DICDI Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Dictyostelium discoideum GN=alg1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 248 bits (634), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 215/390 (55%), Gaps = 34/390 (8%)
Query: 5 GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQW 64
R VVVLGD+GRSPRMQY ++SL++ + +V ++ Y S+PH I+ + SI I + +
Sbjct: 2 NRVAVVVLGDIGRSPRMQYHSMSLSKLENTKVTLIGYRESEPHPQIVNNDSITIEPLKPF 61
Query: 65 P-TIPRGLPKV------LKPVLLLLKPLIQFFMLLWFLCVKIASP-DVFLVQNPPSVPTL 116
P ++ K+ + P+L + K L Q L++ L VK+ SP + LVQ+PP++PT+
Sbjct: 62 PISMSNSFKKIPLISIFMWPLLAICKVLFQIIQLMYVLLVKVPSPLNTILVQSPPAIPTI 121
Query: 117 VAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSH--FVSIYRWIEKYYGKMANGCLCVT 174
++ +R ++DWHN GYTLL LSL + + + + ++IE+Y+ K A L VT
Sbjct: 122 FVMQIVCWIRGVHLVIDWHNLGYTLLKLSLSKSDNHPIIRLAKFIERYFAKNAYAHLFVT 181
Query: 175 QAMQHELAQNWGIKAT--VLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNG 232
M+ +L ++W +K V +D+ F + E+ E N
Sbjct: 182 NEMKIQLVRDWNLKGKTFVFHDKASPIFKSLTDREQEEFL--------------KTFINK 227
Query: 233 MEGQKADETIFTSLAGIDVFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAIL 291
+ D+ S+ P + ++++SSTSWT DEDF ILL+A + YD + +
Sbjct: 228 YSIKGEDKVYIESVISKKSIRNPKQQTSIIISSTSWTQDEDFSILLDAIVKYD--IEHAI 285
Query: 292 NEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLS 351
N +++ EE D L LLFIITGKGP KE Y+EKI L LK+ T+WL
Sbjct: 286 NNNNNKVEEA-----QDESVVLAENLLFIITGKGPQKEYYQEKINSLSLKKSRIITVWLD 340
Query: 352 AEDYPLLLGSADLGVCLHTSSSGLDLPMKV 381
+EDYP LL DLGV LH SSSG+DLPMKV
Sbjct: 341 SEDYPKLLACCDLGVSLHNSSSGIDLPMKV 370
|
Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|O13933|ALG1_SCHPO Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=alg1 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 146/384 (38%), Positives = 200/384 (52%), Gaps = 71/384 (18%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILE-HPSIHIHTMT 62
+ R V+VLGD+ RSPRMQY A+S A+ + +VD++ Y + E H +I + +
Sbjct: 24 KKRIIVLVLGDIARSPRMQYHAVSFAK-LGWKVDLLGYQHPGSSVGLFESHENIRFYPI- 81
Query: 63 QWPTIPRGL-PKVLKPVLLL--LKPLIQFFMLLWFLCVKIASPDVFL-VQNPPSVPTLVA 118
P++P L PK L L LK L QF L W L V+ P FL +QNPP +P
Sbjct: 82 --PSLPAYLQPKNRLQFLFLGPLKVLHQFLALNWALFVR--KPASFLFIQNPPCIPVFFI 137
Query: 119 VKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178
+ LR + FI+DWHNFGY++L+L LG++ FV + + EKY + A L V++ M+
Sbjct: 138 AQCLHILRGTKFIIDWHNFGYSILALKLGKQHTFVKLLKIYEKYMARGAYAHLTVSKRMK 197
Query: 179 HELAQNWGIKAT-VLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQK 237
++ Q WG+ V YD+PP F P E+K ++
Sbjct: 198 -DVLQTWGMNPCYVCYDRPPNHFTPIKNEQKKQM-------------------------- 230
Query: 238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 297
S+ I P+ L+++STSWTPDED IL EA LNE D T
Sbjct: 231 -------SIKKIPCEYNPSSTKLLITSTSWTPDEDIYILWEA-----------LNEYDKT 272
Query: 298 NEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 357
+ P+LL +ITGKGP KE + + I++ L +V F WLS EDYP
Sbjct: 273 LDT--------------PKLLVLITGKGPMKEEFSQYIKKHPLHKVRFCMPWLSIEDYPQ 318
Query: 358 LLGSADLGVCLHTSSSGLDLPMKV 381
++ ADLGVCLHTSSSGLDLPMKV
Sbjct: 319 VMACADLGVCLHTSSSGLDLPMKV 342
|
Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|Q6C3K2|ALG1_YARLI Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ALG1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 209 bits (531), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 146/387 (37%), Positives = 197/387 (50%), Gaps = 70/387 (18%)
Query: 3 RRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62
+R R V+VLGDLGRSPRM Y A SLAR +VD+ Y G+KP IL + I IH +
Sbjct: 38 KRKRTIVLVLGDLGRSPRMLYHARSLARS-GHKVDLCGYDGAKPFDEILNNDLIKIHHI- 95
Query: 63 QWPTI--PRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
P I R LP V V +LK + Q ++L+ L K+ D LVQNPPS+PTL V+
Sbjct: 96 --PLILNTRKLPFV---VFGILKVIRQHWLLISLLY-KLRGADYLLVQNPPSIPTLGVVR 149
Query: 121 WASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178
+ + R+ ++DWHNFGYT+L+L L V ++ E ++G A LCVT M
Sbjct: 150 FYNLFLSTRTKVVLDWHNFGYTILALKLPETHPMVKFAKFYEGFFGGRAFVHLCVTVLMG 209
Query: 179 HELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEG 235
+ + +G+ + L+D+P F P S EK ++ + L+ +
Sbjct: 210 QAMRKTFGMSGRRIVPLHDRPAFHFKPLSESEKLDVLRDFKETLY-------------DD 256
Query: 236 QKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDD 295
AD I +VSSTS+TPDE+F ILL+A +YD +
Sbjct: 257 MTADHKI------------------IVSSTSYTPDENFNILLDALALYDESKLDL----- 293
Query: 296 STNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDY 355
P L IITGKGP + K+ +L+LKRV+ RT WL DY
Sbjct: 294 -------------------PPLRVIITGKGPMMPEFLAKVEKLQLKRVSIRTAWLEFADY 334
Query: 356 PLLLGSADLGVCLHTSSSGLDLPMKVC 382
P +LG+A LGV LH SSSG DLPMKV
Sbjct: 335 PRILGAAHLGVSLHESSSGYDLPMKVV 361
|
Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|Q75BA5|ALG1_ASHGO Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ALG1 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/380 (33%), Positives = 187/380 (49%), Gaps = 59/380 (15%)
Query: 6 RACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWP 65
R + VLGDLG SPR+ Y A S + EV++ Y +P +L+ P + I +
Sbjct: 64 RIAIYVLGDLGHSPRICYHARSFS-AAGWEVELCGYLEEQPPKDLLDDPRVTIRALPGAS 122
Query: 66 TIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL 125
+ L + + V+L +++ LW ++ D L+QNPPS+P L V L
Sbjct: 123 NAGKSLGQTARKVVLQTCHIVR---QLW----ELRGCDYILIQNPPSIPLLPIVAIFKVL 175
Query: 126 RRSAFIVDWHNFGYTLLSLSLGRRSH-FVSIYRWIEKYYGKMANGCLCVTQAMQHELAQN 184
R+ I+DWHNF YT+L L +GR H V + +E + +MA+ + VT AM+ L Q+
Sbjct: 176 TRTRLILDWHNFAYTVLQLRVGRFLHPLVLVSYAVEFLFSRMADYHITVTAAMKDYLVQS 235
Query: 185 WGIKA---TVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADET 241
+ + A V+YD+P E F P E+ L +P ++ + G + Q+ D
Sbjct: 236 FLLPARRIAVMYDRPGEQFRPLPAGER-------GAALAEPF-IRGYIPAGFDVQRGD-- 285
Query: 242 IFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEV 301
++V+STS+T DED +L A +Y+ A D+T
Sbjct: 286 -----------------TILVTSTSFTLDEDINVLFGALKIYESAAAKF----DTT---- 320
Query: 302 FLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS 361
PR+L +TGKGP K Y E++R + +R +WLSAEDYP LL
Sbjct: 321 ------------LPRILLFVTGKGPLKGKYMEEVRNYKWERCTIHFLWLSAEDYPRLLQL 368
Query: 362 ADLGVCLHTSSSGLDLPMKV 381
D GV LHTS+SGLDLPMKV
Sbjct: 369 CDFGVSLHTSTSGLDLPMKV 388
|
Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|P16661|ALG1_YEAST Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALG1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 177 bits (450), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 190/384 (49%), Gaps = 59/384 (15%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
+ R + VLGD+G SPR+ Y A+S ++ + +V++ Y I P+I +H M+
Sbjct: 38 KKRIIIFVLGDVGHSPRICYHAISFSK-LGWQVELCGYVEDTLPKIISSDPNITVHHMSN 96
Query: 64 WPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTL-VAVKWA 122
G V+ V +L ++ F LLW ++ D LVQNPPS+P L +AV +
Sbjct: 97 LKR-KGGGTSVIFMVKKVLFQVLSIFKLLW----ELRGSDYILVQNPPSIPILPIAVLY- 150
Query: 123 SSLRRSAFIVDWHNFGYTLLSLSL-GRRSH-FVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
L I+DWHN Y++L L G H V I +E + K A+ L VT+AM+
Sbjct: 151 -KLTGCKLIIDWHNLAYSILQLKFKGNFYHPLVLISYMVEMIFSKFADYNLTVTEAMRKY 209
Query: 181 LAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQK 237
L Q++ + + VLYD+P F P + + + K L +++ + + + +K
Sbjct: 210 LIQSFHLNPKRCAVLYDRPASQFQPLAGDISRQ------KALTTKAFIKNYIRDDFDTEK 263
Query: 238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 297
D+ ++V+STS+TPDED GILL A +Y+ DS+
Sbjct: 264 GDK-------------------IIVTSTSFTPDEDIGILLGALKIYENSYVKF----DSS 300
Query: 298 NEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 357
P++L ITGKGP KE Y +++ KR +WLSAEDYP
Sbjct: 301 ----------------LPKILCFITGKGPLKEKYMKQVEEYDWKRCQIEFVWLSAEDYPK 344
Query: 358 LLGSADLGVCLHTSSSGLDLPMKV 381
LL D GV LHTSSSGLDLPMK+
Sbjct: 345 LLQLCDYGVSLHTSSSGLDLPMKI 368
|
Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|Q59Q79|ALG1_CANAL Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ALG1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 191/387 (49%), Gaps = 72/387 (18%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
+R + VLGDLG SPRM Y A S ++ + V++ Y ++P I++ +I I +
Sbjct: 49 NKRKTISIFVLGDLGHSPRMCYHASSFSK-LDYYVNLCGYVETEPSHQIVDDVNIDIIPI 107
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
LP ++ +L +++ + + +LW D ++QNPPS+P L+ V
Sbjct: 108 EAIKNT-NNLPYIMFAILKVVRQCGKIWSILW----DTRGSDYIMIQNPPSIPILLIVIL 162
Query: 122 ASSL--RRSAFIVDWHNFGYTLLSLSLGRRSH-FVSIYRWIEKYYGKMANGCLCVTQAMQ 178
++ R + I+DWHN YT+L+L +H FV + + EK G+ AN + VT++M+
Sbjct: 163 FKTVFSRETKLIIDWHNLNYTILNLRYNNLNHPFVKLVKLYEKILGQFANLNITVTKSMK 222
Query: 179 HELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEG 235
L + +G K LYD+P F P L K E M
Sbjct: 223 KYLVKEFGFQKSKIVTLYDRPGVQFQP--LSNKREF---------------------MSE 259
Query: 236 QKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDD 295
K E ID+ + +++SSTS+TPDEDF ILL+ A+ N ++
Sbjct: 260 HKLFE-------DIDI----EKYKVLISSTSFTPDEDFNILLD----------ALKNYEN 298
Query: 296 STNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAED 354
+ N P +L I+TGKGP K + E + +L +V ++ WLS+ED
Sbjct: 299 TPNT---------------PPILLIVTGKGPLKGKFLETVDKLEFTNKVCVKSAWLSSED 343
Query: 355 YPLLLGSADLGVCLHTSSSGLDLPMKV 381
YP +L ADLG+ LHTSSSG+DLPMK+
Sbjct: 344 YPKVLACADLGISLHTSSSGIDLPMKI 370
|
Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|Q6CVU2|ALG1_KLULA Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ALG1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/383 (32%), Positives = 185/383 (48%), Gaps = 64/383 (16%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
+ R +VVLGDLG SPR+ Y A S ++ +V++ Y S IL+ +I IH + +
Sbjct: 42 KTRILIVVLGDLGHSPRILYHARSFSK-AGFQVELSGYVDSDIPTDILDDDNIEIHGLKK 100
Query: 64 WPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWAS 123
+ + L K LK L Q + W K+ + D L+QNPP++P L
Sbjct: 101 YGSEKGLLVKALKQGL-------QLCSMFW----KLRAVDYILLQNPPTIPILPIAVVVK 149
Query: 124 SLRRSAFIVDWHNFGYTLLSLSLGRR--SHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
+ R+ I+DWHN GYT+L + + V + IE + K AN L VT+AM+ L
Sbjct: 150 TFSRAKLIIDWHNLGYTILQMKFKDQFLHPLVLLAYLIEWIFAKFANYHLTVTKAMKTYL 209
Query: 182 AQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238
+ +GI K VLYD+P + F P + E + Q+ ++ + +
Sbjct: 210 VEKFGIDGKKIAVLYDRPGKQFSPLKEADDREALLK-----------QEFIAKYIPKE-- 256
Query: 239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTN 298
D+ ++ + V+STS+TPDED +L+ + +Y+ D T
Sbjct: 257 ----------FDI----SKDKIFVTSTSFTPDEDISVLIGSFKIYENSFQKF----DQT- 297
Query: 299 EEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLL 358
PR+L ITGKGP +E ++++ + RV +WLS+EDYP L
Sbjct: 298 ---------------LPRILCFITGKGPLQEKIVKQVQDFKWDRVQVEFLWLSSEDYPKL 342
Query: 359 LGSADLGVCLHTSSSGLDLPMKV 381
L D GV LHTSSSGLDLPMK+
Sbjct: 343 LRLCDYGVSLHTSSSGLDLPMKI 365
|
Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 414 | ||||||
| 225458860 | 598 | PREDICTED: chitobiosyldiphosphodolichol | 0.920 | 0.637 | 0.794 | 1e-179 | |
| 388521579 | 484 | unknown [Medicago truncatula] | 0.917 | 0.785 | 0.780 | 1e-178 | |
| 302142187 | 484 | unnamed protein product [Vitis vinifera] | 0.920 | 0.787 | 0.794 | 1e-178 | |
| 357451823 | 498 | Chitobiosyldiphosphodolichol beta-mannos | 0.917 | 0.763 | 0.780 | 1e-178 | |
| 356555181 | 521 | PREDICTED: chitobiosyldiphosphodolichol | 0.917 | 0.729 | 0.769 | 1e-178 | |
| 224121616 | 481 | predicted protein [Populus trichocarpa] | 0.917 | 0.790 | 0.781 | 1e-176 | |
| 255582792 | 476 | beta1,4 mannosyltransferase, putative [R | 0.913 | 0.794 | 0.772 | 1e-170 | |
| 449445120 | 480 | PREDICTED: chitobiosyldiphosphodolichol | 0.915 | 0.789 | 0.751 | 1e-166 | |
| 297850068 | 465 | predicted protein [Arabidopsis lyrata su | 0.898 | 0.8 | 0.719 | 1e-157 | |
| 186478554 | 496 | beta-1,4-mannosyltransferase [Arabidopsi | 0.898 | 0.75 | 0.716 | 1e-157 |
| >gi|225458860|ref|XP_002283369.1| PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 305/384 (79%), Positives = 334/384 (86%), Gaps = 3/384 (0%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
+GRRGRA VVVLGD+GRSPRMQY ALSLARQ SLEVD+VAYGGS PH+A+LE+PSIHIHT
Sbjct: 124 IGRRGRAAVVVLGDIGRSPRMQYHALSLARQASLEVDIVAYGGSTPHSAVLENPSIHIHT 183
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M QWPTIPR + K+ P++LL K L QFF L WFLCVKI SPDVF+VQNPPSVPTLVAVK
Sbjct: 184 MKQWPTIPRIVSKIFYPLVLLFKALFQFFTLFWFLCVKIPSPDVFIVQNPPSVPTLVAVK 243
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
WAS LR SAFIVDWHNFGYTLL LSLGR S FV++Y W EKYYGK ANG LCVT+AMQHE
Sbjct: 244 WASWLRNSAFIVDWHNFGYTLLGLSLGRSSRFVALYHWFEKYYGKAANGSLCVTRAMQHE 303
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNG-ME--GQK 237
LAQNWGIKATVLYDQPPEFF PT +EEKH+LFCRL+K L P G QDCV+ G ME Q
Sbjct: 304 LAQNWGIKATVLYDQPPEFFRPTPMEEKHKLFCRLHKDLCHPRGGQDCVTAGTMELWNQD 363
Query: 238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 297
DET+FT+ D+FLK NRPALVVSSTSWTPDEDFG+LLEAA+MYDRRVAAILNEDDST
Sbjct: 364 TDETLFTAKMDTDIFLKSNRPALVVSSTSWTPDEDFGMLLEAAVMYDRRVAAILNEDDST 423
Query: 298 NEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 357
EEV KE + GKQ+LYPRLLFIITGKGP+KE YEEKIR+L+L RVAFRTMWLSAEDYPL
Sbjct: 424 KEEVLWKETNSGKQFLYPRLLFIITGKGPNKEKYEEKIRQLKLNRVAFRTMWLSAEDYPL 483
Query: 358 LLGSADLGVCLHTSSSGLDLPMKV 381
LLGSADLG+CLHTSSSGLDLPMKV
Sbjct: 484 LLGSADLGICLHTSSSGLDLPMKV 507
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388521579|gb|AFK48851.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 299/383 (78%), Positives = 337/383 (87%), Gaps = 3/383 (0%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GRRGRACVVVLGD+GRSPRMQY ALSL+ Q LEVD+VAYGGS+PH ++L +PSIHIH M
Sbjct: 12 GRRGRACVVVLGDIGRSPRMQYHALSLSNQAFLEVDIVAYGGSEPHTSLLANPSIHIHLM 71
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
QWPT + LPK+L+P +LLLKPLIQF MLLW+LCVKI SPD+F+VQNPPSVPTLVAVKW
Sbjct: 72 KQWPTARQNLPKILQPFMLLLKPLIQFVMLLWYLCVKIPSPDIFIVQNPPSVPTLVAVKW 131
Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
AS LR S+F++DWHNFGYTLL +SLGR S FVS+Y+W EK+YGKMA+ LCVT+AMQHEL
Sbjct: 132 ASWLRNSSFVIDWHNFGYTLLGMSLGRNSRFVSLYKWFEKHYGKMADTSLCVTKAMQHEL 191
Query: 182 AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNG---MEGQKA 238
AQNWGI ATVLYDQPP+FFHP SLEE+H+LFCRLN+ + PLGV DCVSNG M Q
Sbjct: 192 AQNWGINATVLYDQPPDFFHPASLEERHKLFCRLNEHFYHPLGVGDCVSNGTSLMSSQIQ 251
Query: 239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTN 298
+ET+FT+ AG +V LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS +
Sbjct: 252 NETLFTTEAGSNVSLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSLD 311
Query: 299 EEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLL 358
EEV KEISDGKQ LYPRLLF+ITGKGP+K YE KI+ L+LKRVAFRTMWLSA+DYPLL
Sbjct: 312 EEVIWKEISDGKQCLYPRLLFVITGKGPEKAKYEAKIKSLKLKRVAFRTMWLSADDYPLL 371
Query: 359 LGSADLGVCLHTSSSGLDLPMKV 381
LGSADLGVCLHTSSSGLDLPMKV
Sbjct: 372 LGSADLGVCLHTSSSGLDLPMKV 394
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302142187|emb|CBI19390.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 305/384 (79%), Positives = 334/384 (86%), Gaps = 3/384 (0%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
+GRRGRA VVVLGD+GRSPRMQY ALSLARQ SLEVD+VAYGGS PH+A+LE+PSIHIHT
Sbjct: 9 IGRRGRAAVVVLGDIGRSPRMQYHALSLARQASLEVDIVAYGGSTPHSAVLENPSIHIHT 68
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M QWPTIPR + K+ P++LL K L QFF L WFLCVKI SPDVF+VQNPPSVPTLVAVK
Sbjct: 69 MKQWPTIPRIVSKIFYPLVLLFKALFQFFTLFWFLCVKIPSPDVFIVQNPPSVPTLVAVK 128
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
WAS LR SAFIVDWHNFGYTLL LSLGR S FV++Y W EKYYGK ANG LCVT+AMQHE
Sbjct: 129 WASWLRNSAFIVDWHNFGYTLLGLSLGRSSRFVALYHWFEKYYGKAANGSLCVTRAMQHE 188
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNG-ME--GQK 237
LAQNWGIKATVLYDQPPEFF PT +EEKH+LFCRL+K L P G QDCV+ G ME Q
Sbjct: 189 LAQNWGIKATVLYDQPPEFFRPTPMEEKHKLFCRLHKDLCHPRGGQDCVTAGTMELWNQD 248
Query: 238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 297
DET+FT+ D+FLK NRPALVVSSTSWTPDEDFG+LLEAA+MYDRRVAAILNEDDST
Sbjct: 249 TDETLFTAKMDTDIFLKSNRPALVVSSTSWTPDEDFGMLLEAAVMYDRRVAAILNEDDST 308
Query: 298 NEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 357
EEV KE + GKQ+LYPRLLFIITGKGP+KE YEEKIR+L+L RVAFRTMWLSAEDYPL
Sbjct: 309 KEEVLWKETNSGKQFLYPRLLFIITGKGPNKEKYEEKIRQLKLNRVAFRTMWLSAEDYPL 368
Query: 358 LLGSADLGVCLHTSSSGLDLPMKV 381
LLGSADLG+CLHTSSSGLDLPMKV
Sbjct: 369 LLGSADLGICLHTSSSGLDLPMKV 392
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357451823|ref|XP_003596188.1| Chitobiosyldiphosphodolichol beta-mannosyltransferase [Medicago truncatula] gi|355485236|gb|AES66439.1| Chitobiosyldiphosphodolichol beta-mannosyltransferase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 299/383 (78%), Positives = 337/383 (87%), Gaps = 3/383 (0%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GRRGRACVVVLGD+GRSPRMQY ALSL+ Q LEVD+VAYGGS+PH ++L +PSIHIH M
Sbjct: 12 GRRGRACVVVLGDIGRSPRMQYHALSLSNQAFLEVDIVAYGGSEPHTSLLANPSIHIHLM 71
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
QWPT + LPK+L+P +LLLKPLIQF MLLW+LCVKI SPD+F+VQNPPSVPTLVAVKW
Sbjct: 72 KQWPTARQNLPKILQPFMLLLKPLIQFVMLLWYLCVKIPSPDIFIVQNPPSVPTLVAVKW 131
Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
AS LR S+F++DWHNFGYTLL +SLGR S FVS+Y+W EK+YGKMA+ LCVT+AMQHEL
Sbjct: 132 ASWLRNSSFVIDWHNFGYTLLGMSLGRNSRFVSLYKWFEKHYGKMADTSLCVTKAMQHEL 191
Query: 182 AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNG---MEGQKA 238
AQNWGI ATVLYDQPP+FFHP SLEE+H+LFCRLN+ + PLGV DCVSNG M Q
Sbjct: 192 AQNWGINATVLYDQPPDFFHPASLEERHKLFCRLNEHFYHPLGVGDCVSNGTSLMSSQIQ 251
Query: 239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTN 298
+ET+FT+ AG +V LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS +
Sbjct: 252 NETLFTTEAGSNVSLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSLD 311
Query: 299 EEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLL 358
EEV KEISDGKQ LYPRLLF+ITGKGP+K YE KI+ L+LKRVAFRTMWLSA+DYPLL
Sbjct: 312 EEVIWKEISDGKQCLYPRLLFVITGKGPEKAKYEAKIKSLKLKRVAFRTMWLSADDYPLL 371
Query: 359 LGSADLGVCLHTSSSGLDLPMKV 381
LGSADLGVCLHTSSSGLDLPMKV
Sbjct: 372 LGSADLGVCLHTSSSGLDLPMKV 394
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356555181|ref|XP_003545914.1| PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 629 bits (1622), Expect = e-178, Method: Compositional matrix adjust.
Identities = 297/386 (76%), Positives = 339/386 (87%), Gaps = 6/386 (1%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GRRGRACVVVLGD+GRSPRMQY ALSLA Q SLEVD+VAYGGS+PH A+L +PSIHI+ M
Sbjct: 11 GRRGRACVVVLGDIGRSPRMQYHALSLANQASLEVDIVAYGGSEPHTALLANPSIHIYIM 70
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
QW T + LPK+L+P++LLLKPL+QF MLLWFLCVKI SPD+F+VQNPPSVPTLVAVKW
Sbjct: 71 KQWLTASQSLPKILRPIMLLLKPLVQFCMLLWFLCVKIPSPDIFIVQNPPSVPTLVAVKW 130
Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
AS LR S+F++DWHNFGYTLL+LSLGR SHFVS+Y+W EK+YGKMA+ LCVT+AMQHEL
Sbjct: 131 ASWLRNSSFVIDWHNFGYTLLALSLGRNSHFVSLYKWFEKHYGKMADASLCVTKAMQHEL 190
Query: 182 AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQK---- 237
AQNWGI ATVLYDQPP+ FHP SLEE+H+LFCRLN+ L + LGV+DCVSNG G
Sbjct: 191 AQNWGINATVLYDQPPDIFHPASLEERHKLFCRLNEDLFRSLGVRDCVSNGKIGNSLVAS 250
Query: 238 --ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDD 295
+ET+F + G +++LKPNRPALVVSSTSWTPDEDFGILLEAA+MYDRRVAAIL EDD
Sbjct: 251 CHQNETLFATEVGSNIYLKPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAAILGEDD 310
Query: 296 STNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDY 355
S +EEV KEISDGKQ LYPRLLFIITGKGP+KE YE KI+R++LKRVAFRTMWLSA+DY
Sbjct: 311 SVDEEVIWKEISDGKQCLYPRLLFIITGKGPEKEKYEVKIKRMKLKRVAFRTMWLSADDY 370
Query: 356 PLLLGSADLGVCLHTSSSGLDLPMKV 381
PLLLGSADLGVCLHTSSSGLDLPMKV
Sbjct: 371 PLLLGSADLGVCLHTSSSGLDLPMKV 396
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224121616|ref|XP_002330745.1| predicted protein [Populus trichocarpa] gi|222872521|gb|EEF09652.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 300/384 (78%), Positives = 333/384 (86%), Gaps = 4/384 (1%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
MG+RGRACVVVLGD+GRSPRMQY ALSLARQ SL+VD+VAYGGS+PH A+ E+ SIHIH
Sbjct: 1 MGKRGRACVVVLGDIGRSPRMQYHALSLARQASLQVDIVAYGGSEPHMALRENQSIHIHK 60
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M QWP IP+GLPK+ KP +LLLKPL QF MLLW+LCVKI PDVFLVQNPPSVPTLVAVK
Sbjct: 61 MKQWPAIPQGLPKMFKPFMLLLKPLFQFLMLLWYLCVKIPPPDVFLVQNPPSVPTLVAVK 120
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
WAS LR + FIVDWHNFGYTLL+LSLGR S FV++YRW E++YGKMA+G LCVT+AMQHE
Sbjct: 121 WASWLRNAKFIVDWHNFGYTLLALSLGRNSRFVTVYRWFERHYGKMAHGSLCVTRAMQHE 180
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA-- 238
L QNWGIKA VLYDQPPEFFHP SLEEKH+LFCRL K + + GV DC S+G G +
Sbjct: 181 LTQNWGIKAAVLYDQPPEFFHPASLEEKHKLFCRLGKHISESQGVHDCASHGAVGMGSPN 240
Query: 239 -DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 297
+ET+FT++ D+FLKPNRPALVVSSTSWT DEDFGILLEAA+MYDRRVAAILNEDDST
Sbjct: 241 LNETLFTTMVADDIFLKPNRPALVVSSTSWTADEDFGILLEAAVMYDRRVAAILNEDDST 300
Query: 298 NEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 357
EV E+S GK+ LYPRLLFIITGKGP+KE YEEKIRRL LKRVAFRTMWLSAEDYPL
Sbjct: 301 -VEVLWNEMSAGKECLYPRLLFIITGKGPEKEKYEEKIRRLHLKRVAFRTMWLSAEDYPL 359
Query: 358 LLGSADLGVCLHTSSSGLDLPMKV 381
LLGSADLGVCLHTSSSGLDLPMKV
Sbjct: 360 LLGSADLGVCLHTSSSGLDLPMKV 383
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255582792|ref|XP_002532170.1| beta1,4 mannosyltransferase, putative [Ricinus communis] gi|223528138|gb|EEF30207.1| beta1,4 mannosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 292/378 (77%), Positives = 332/378 (87%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
RGRACVVVLGD+GRSPRMQY ALSLA Q SL+VD+VAYGGS+PH A+L++ SIHIH M Q
Sbjct: 8 RGRACVVVLGDIGRSPRMQYHALSLALQASLQVDIVAYGGSEPHMALLQNQSIHIHKMKQ 67
Query: 64 WPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWAS 123
WP +P+ LPK+LK ++L+LKPL QFF+LLW LC K+ +PDVF+VQNPPSVPTLVAVKWAS
Sbjct: 68 WPVLPQSLPKLLKALVLVLKPLFQFFVLLWHLCFKVPAPDVFIVQNPPSVPTLVAVKWAS 127
Query: 124 SLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQ 183
LR SAFIVDWHNFGYTLL+LSLGR S FV++YRW E++YG+MANG LCVT+AMQHELAQ
Sbjct: 128 WLRNSAFIVDWHNFGYTLLALSLGRNSRFVAVYRWFERHYGRMANGSLCVTKAMQHELAQ 187
Query: 184 NWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIF 243
NWGI ATVLYDQPPEFF+PTSLEEKH+LFCRL+K + QP + DC S GM +ET+F
Sbjct: 188 NWGINATVLYDQPPEFFNPTSLEEKHKLFCRLDKYIIQPGSIHDCASYGMGNHNVNETMF 247
Query: 244 TSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFL 303
T+ D LKPNRPALVVSSTSWTPDEDFGILLEAA+MYDRRVAAILNE+DS+ +EV
Sbjct: 248 TTSVDGDTILKPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAAILNENDSSLDEVLW 307
Query: 304 KEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSAD 363
KE++ GKQ LYPRLLF+ITGKGP+KE YEEKIRRL LKRVAFRTMWLSAEDYPLLLGSAD
Sbjct: 308 KELTKGKQCLYPRLLFVITGKGPEKEKYEEKIRRLHLKRVAFRTMWLSAEDYPLLLGSAD 367
Query: 364 LGVCLHTSSSGLDLPMKV 381
LGVCLHTSSSGLDLPMKV
Sbjct: 368 LGVCLHTSSSGLDLPMKV 385
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449445120|ref|XP_004140321.1| PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase-like [Cucumis sativus] gi|449507727|ref|XP_004163113.1| PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 287/382 (75%), Positives = 324/382 (84%), Gaps = 3/382 (0%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
G+ GRACVVVLGDLGRSPRMQY ALSLARQ +LEVD+VAYGGS+PH+A+LEH SIHIHTM
Sbjct: 9 GKGGRACVVVLGDLGRSPRMQYHALSLARQANLEVDIVAYGGSQPHSALLEHRSIHIHTM 68
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
T WP + LP + +PV LL+KPL+QF MLLWFL V+I SP F+VQNPPSVPTL+AVKW
Sbjct: 69 TPWPKFLQNLPWIFRPVTLLVKPLVQFLMLLWFL-VRICSPAFFIVQNPPSVPTLIAVKW 127
Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
S L+RSAFI+DWHNFG+TLL+LSLGR S FV++YRWIEKY+GKMA+ CVT+AMQHEL
Sbjct: 128 VSVLKRSAFIIDWHNFGHTLLALSLGRNSSFVAVYRWIEKYFGKMADDSFCVTKAMQHEL 187
Query: 182 AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVS--NGMEGQKAD 239
A+NW IKATV YDQPPEFFH SL EKHELF RL+ + QPLG+QDCVS GM G +
Sbjct: 188 AENWDIKATVFYDQPPEFFHVASLLEKHELFYRLHSNIIQPLGLQDCVSYGAGMLGHEHQ 247
Query: 240 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNE 299
ET T L G D+FLK NRPA+VVSSTSWTPDEDF ILLEAA+MYDRRVAA+LNEDDS +
Sbjct: 248 ETFSTRLVGKDIFLKQNRPAVVVSSTSWTPDEDFNILLEAAVMYDRRVAALLNEDDSIPD 307
Query: 300 EVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL 359
E KEI D KQ L+PRLLFIITGKGPDK+ YE+KI +L LKRVAFRTMWLSAEDYPLLL
Sbjct: 308 EFVWKEIYDEKQCLFPRLLFIITGKGPDKQEYEDKISKLHLKRVAFRTMWLSAEDYPLLL 367
Query: 360 GSADLGVCLHTSSSGLDLPMKV 381
GSADLGVCLHTSSSGLDLPMKV
Sbjct: 368 GSADLGVCLHTSSSGLDLPMKV 389
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297850068|ref|XP_002892915.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297338757|gb|EFH69174.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 274/381 (71%), Positives = 313/381 (82%), Gaps = 9/381 (2%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
MG+RGRACVVVLGDLGRSPRMQY ALSLARQ S +VD+VAYGGS PH A+L HPSIHIHT
Sbjct: 1 MGKRGRACVVVLGDLGRSPRMQYHALSLARQASFQVDIVAYGGSIPHEAVLNHPSIHIHT 60
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M Q P + PK+L PV LLLK IQF MLLWFL VK+ +PD+FLVQNPPSVPTL+AVK
Sbjct: 61 MAQ-PRFLQLFPKILYPVTLLLKAFIQFTMLLWFLFVKVPAPDIFLVQNPPSVPTLIAVK 119
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
WASS RR+AF+VDWHNFGYTLL+LSLGR + FVS+YRW E +YGKMA G LCVT+AMQHE
Sbjct: 120 WASSWRRAAFVVDWHNFGYTLLALSLGRNNLFVSLYRWFENHYGKMATGSLCVTKAMQHE 179
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240
L QNWG++A VLYDQPPEFF P LEE+HELFCR+ K L P+GV D +S +E Q+ +E
Sbjct: 180 LDQNWGVRAQVLYDQPPEFFRPALLEERHELFCRVKKDLCHPIGVYDIISIELENQELNE 239
Query: 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEE 300
T+FT+ D+ LK NRPALVVSSTSWTPDE+FGILLEAA+MYDRRVAA ++
Sbjct: 240 TLFTTKINTDISLKQNRPALVVSSTSWTPDENFGILLEAAVMYDRRVAARSKGSETA--- 296
Query: 301 VFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG 360
EIS+ Q+LYP LLFIITGKGP+KE YE KI+RL L+ VAFRTMWL+AEDYPLLLG
Sbjct: 297 ----EISE-DQHLYPNLLFIITGKGPEKEMYEGKIKRLNLRHVAFRTMWLAAEDYPLLLG 351
Query: 361 SADLGVCLHTSSSGLDLPMKV 381
SADLGVCLHTSSSGLDLPMKV
Sbjct: 352 SADLGVCLHTSSSGLDLPMKV 372
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|186478554|ref|NP_001117297.1| beta-1,4-mannosyltransferase [Arabidopsis thaliana] gi|332191352|gb|AEE29473.1| beta-1,4-mannosyltransferase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust.
Identities = 273/381 (71%), Positives = 313/381 (82%), Gaps = 9/381 (2%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
MG+RGRACVVVLGDLGRSPRMQY ALSLARQ S +VD+VAYGGS PH A+L HPSIHIHT
Sbjct: 1 MGKRGRACVVVLGDLGRSPRMQYHALSLARQASFQVDIVAYGGSIPHEAVLNHPSIHIHT 60
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M Q P + PK+L PV LLLK IQF MLLWFL VK+ +PD+FLVQNPPSVPTL+AVK
Sbjct: 61 MAQ-PRFIQYFPKILYPVTLLLKAFIQFTMLLWFLFVKVPAPDIFLVQNPPSVPTLIAVK 119
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
WASS RR+AF+VDWHNFGYTLL+LSLGR + VS+YRW E +YGKMA G LCVT+AMQHE
Sbjct: 120 WASSWRRAAFVVDWHNFGYTLLALSLGRNNLLVSLYRWSENHYGKMATGSLCVTKAMQHE 179
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240
L QNWG++A VLYDQPPEFF P LEE+HELFCR+ K L P+GV D +S +E Q+ +E
Sbjct: 180 LDQNWGVRAKVLYDQPPEFFRPALLEERHELFCRVRKDLCHPIGVYDFISRELENQELNE 239
Query: 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEE 300
T+FT+ D+ LK NRPALVVSSTSWTPDE+FGILLEAA+MYDRRVAA ++
Sbjct: 240 TLFTTKFNADISLKQNRPALVVSSTSWTPDENFGILLEAAVMYDRRVAARSKGSETA--- 296
Query: 301 VFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG 360
EIS+ +Q+ YP LLFIITGKGP+KE YEEKI+RL L+ VAFRTMWL+AEDYPLLLG
Sbjct: 297 ----EISE-EQHHYPNLLFIITGKGPEKEMYEEKIKRLNLRHVAFRTMWLAAEDYPLLLG 351
Query: 361 SADLGVCLHTSSSGLDLPMKV 381
SADLGVCLHTSSSGLDLPMKV
Sbjct: 352 SADLGVCLHTSSSGLDLPMKV 372
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 414 | ||||||
| TAIR|locus:2017963 | 496 | AT1G16570 [Arabidopsis thalian | 0.898 | 0.75 | 0.698 | 4.4e-139 | |
| ZFIN|ZDB-GENE-030131-6093 | 488 | alg1 "asparagine-linked glycos | 0.644 | 0.547 | 0.404 | 6.8e-71 | |
| FB|FBgn0038552 | 446 | CG18012 [Drosophila melanogast | 0.664 | 0.616 | 0.395 | 1.1e-70 | |
| UNIPROTKB|E1BRK4 | 462 | ALG1 "Uncharacterized protein" | 0.659 | 0.590 | 0.394 | 3.7e-70 | |
| UNIPROTKB|F1RKX2 | 468 | LOC100524193 "Uncharacterized | 0.664 | 0.587 | 0.379 | 2e-67 | |
| MGI|MGI:2384774 | 482 | Alg1 "asparagine-linked glycos | 0.661 | 0.568 | 0.383 | 1.1e-66 | |
| UNIPROTKB|Q9BT22 | 464 | ALG1 "Chitobiosyldiphosphodoli | 0.654 | 0.584 | 0.386 | 1.8e-66 | |
| UNIPROTKB|F1N2J7 | 464 | ALG1 "Uncharacterized protein" | 0.659 | 0.588 | 0.398 | 2.9e-66 | |
| RGD|1310700 | 481 | Alg1 "ALG1, chitobiosyldiphosp | 0.661 | 0.569 | 0.383 | 3.7e-66 | |
| UNIPROTKB|D4A5S6 | 465 | Alg1 "Protein Alg1" [Rattus no | 0.661 | 0.589 | 0.383 | 3.7e-66 |
| TAIR|locus:2017963 AT1G16570 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1361 (484.2 bits), Expect = 4.4e-139, P = 4.4e-139
Identities = 266/381 (69%), Positives = 303/381 (79%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
MG+RGRACVVVLGDLGRSPRMQY ALSLARQ S +VD+VAYGGS PH A+L HPSIHIHT
Sbjct: 1 MGKRGRACVVVLGDLGRSPRMQYHALSLARQASFQVDIVAYGGSIPHEAVLNHPSIHIHT 60
Query: 61 MTQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M Q P + IQF MLLWFL VK+ +PD+FLVQNPPSVPTL+AVK
Sbjct: 61 MAQ-PRFIQYFPKILYPVTLLLKAFIQFTMLLWFLFVKVPAPDIFLVQNPPSVPTLIAVK 119
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
WASS RR+AF+VDWHNFGYTLL+LSLGR + VS+YRW E +YGKMA G LCVT+AMQHE
Sbjct: 120 WASSWRRAAFVVDWHNFGYTLLALSLGRNNLLVSLYRWSENHYGKMATGSLCVTKAMQHE 179
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240
L QNWG++A VLYDQPPEFF P LEE+HELFCR+ K L P+GV D +S +E Q+ +E
Sbjct: 180 LDQNWGVRAKVLYDQPPEFFRPALLEERHELFCRVRKDLCHPIGVYDFISRELENQELNE 239
Query: 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEE 300
T+FT+ D+ LK NRPALVVSSTSWTPDE+FGILLEAA+MYDRRVAA S E
Sbjct: 240 TLFTTKFNADISLKQNRPALVVSSTSWTPDENFGILLEAAVMYDRRVAA-----RSKGSE 294
Query: 301 VFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG 360
EIS+ +Q+ YP LLFIITGKGP+KE YEEKI+RL L+ VAFRTMWL+AEDYPLLLG
Sbjct: 295 T--AEISE-EQHHYPNLLFIITGKGPEKEMYEEKIKRLNLRHVAFRTMWLAAEDYPLLLG 351
Query: 361 SADLGVCLHTSSSGLDLPMKV 381
SADLGVCLHTSSSGLDLPMKV
Sbjct: 352 SADLGVCLHTSSSGLDLPMKV 372
|
|
| ZFIN|ZDB-GENE-030131-6093 alg1 "asparagine-linked glycosylation 1 homolog (yeast, beta-1,4-mannosyltransferase)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 512 (185.3 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 115/284 (40%), Positives = 165/284 (58%)
Query: 8 CVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTI 67
CV+VLGD+GRSPRMQY ALSL++ V ++ + G+KPH ILE I I +++
Sbjct: 58 CVLVLGDIGRSPRMQYHALSLSKH-GYNVTIIGFLGTKPHQDILEDDRIDILPISEL--- 113
Query: 68 PRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW-ASSLR 126
+G +Q F LL+ L + I L+QNPP +P +AV W AS +R
Sbjct: 114 -KGLTVGPRIFRYISKVTLQSFQLLYVL-MTIEDQGYILMQNPPGLPA-IAVTWMASRIR 170
Query: 127 RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWG 186
+ FI+DWHN+GYT+++LS G V + +W EK +G +++ LCVT AM+ +L +NW
Sbjct: 171 GNQFIIDWHNYGYTIMALSHGENHLIVRLAKWYEKIFGCLSDHNLCVTSAMREDLCKNWN 230
Query: 187 IKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFT-- 244
I+AT LYD+PP F T L+ +HELF R+ + P V+ + + T FT
Sbjct: 231 IEATTLYDKPPSIFRETPLKLQHELFVRMGSA-YLPFRPSSAVTK----EYMELTAFTER 285
Query: 245 -SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRV 287
+ G V RPAL++SSTSWT DEDF +LL+A Y++ V
Sbjct: 286 NTQTGA-VTRSAGRPALLISSTSWTEDEDFSVLLQALEEYEKFV 328
|
|
| FB|FBgn0038552 CG18012 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 502 (181.8 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 115/291 (39%), Positives = 160/291 (54%)
Query: 3 RRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62
++ ACV+VLGD+GRSPRMQY A SL + + VD++ Y ++P + +HP IH +T
Sbjct: 7 KKRNACVIVLGDIGRSPRMQYHAQSLLEE-NYHVDMIGYLETRPLEELTQHPRCRIHELT 65
Query: 63 QWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWA 122
P Q LL L + I P LVQNPP +PTL+
Sbjct: 66 AVPV-----TNLTPKLRLLFKAFWQTLSLLMAL-ISIGRPSFLLVQNPPGIPTLIVCYLY 119
Query: 123 SSLRRSAFIVDWHNFGYTLLSLSL--GRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
++ R+ +DWHN+ YT+L+L + G +S + + R +E+Y+G A+ CVT+AMQ +
Sbjct: 120 CAVTRTKLAIDWHNYTYTVLALGMSKGEQSPLIRLVRRLERYFGSKAHTHFCVTRAMQED 179
Query: 181 LAQNWGI-KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKAD 239
L QNWGI VLYD+ P FHP L KHEL+ +L K Q +D + + +
Sbjct: 180 LQQNWGIGPVKVLYDRAPAQFHPIDLTHKHELYLKLAKDYPQ-FQAKDAEQSDV----LE 234
Query: 240 ETIFTS-LAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAA 289
T T LA V +P R A++VSSTSWTPDEDFGILL+A Y+ A
Sbjct: 235 ATALTQKLASGVVQYRPQRQAVLVSSTSWTPDEDFGILLKALQAYEETAQA 285
|
|
| UNIPROTKB|E1BRK4 ALG1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 479 (173.7 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 112/284 (39%), Positives = 163/284 (57%)
Query: 5 GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQW 64
GR CV VLGDLGRSPRMQY ALSLAR V ++ Y ++PH +L I + +++
Sbjct: 30 GRVCVAVLGDLGRSPRMQYHALSLARH-GRGVALLGYFQTRPHRDVLSSGEIRVVPLSEL 88
Query: 65 PTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASS 124
+ G Q LL+ + +++ P L+QNPP +P+ +AV W +
Sbjct: 89 RCLRVGPKLFQYVVKVVA----QTVQLLYTM-LRMDPPSYVLLQNPPGLPS-IAVAWVAC 142
Query: 125 LR-RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQ 183
L RS I+DWHN+GYT++SL+ GR V I +W EK +G++++ LCVT AM+ +L
Sbjct: 143 LFWRSKLIIDWHNYGYTIMSLNHGRNHPLVLIAKWYEKLFGRLSDYNLCVTDAMKEDLWV 202
Query: 184 NWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIF 243
N IKA LYD+P +F T LE +H+L+ +L K ++P S +++ T
Sbjct: 203 NCNIKAVTLYDRPASYFKETPLELQHQLYLKLAKD-YEPFKPHT-ESVSWNAERSAFTER 260
Query: 244 TSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRV 287
+G DV RPAL++SSTSWT DEDF +LL+A Y++ V
Sbjct: 261 DEKSG-DVIKSRGRPALLISSTSWTEDEDFSVLLKALEDYEQYV 303
|
|
| UNIPROTKB|F1RKX2 LOC100524193 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 472 (171.2 bits), Expect = 2.0e-67, Sum P(2) = 2.0e-67
Identities = 115/303 (37%), Positives = 169/303 (55%)
Query: 2 GRRGR-ACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
GR R VVVLGDLGRSPRMQY ALSLA+ V ++ + S+P +L+ I I +
Sbjct: 33 GRASRHVMVVVLGDLGRSPRMQYHALSLAKN-GFSVTLLGFCNSRPREELLQSDRIQIVS 91
Query: 61 MTQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
+T+ P + G Q LLW L + + +FL QNPP +P +AV
Sbjct: 92 LTELPRLTVGPHILQYGVKVV----FQAVHLLWKLMCRDPAAYIFL-QNPPGLPA-IAVC 145
Query: 121 W-ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179
W A+ L S ++DWHN+GY+++ L G V + +W EK G++++ LCVT AM+
Sbjct: 146 WFAACLCGSKLVIDWHNYGYSIMGLVHGPGHRLVLLAKWYEKLCGRLSHLNLCVTNAMRE 205
Query: 180 ELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILH------QPLGVQDCVSNGM 233
+LA+NWGIKA +YD+P FF T L+ +H+LF +L++I +P + D +
Sbjct: 206 DLAENWGIKAVTVYDKPASFFKETPLDLQHQLFMKLSRIYSVFRARSEPSDL-DMERSAF 264
Query: 234 EGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE 293
+ A + T L G RPAL+VSSTSWT DEDF +LL A +++ ++N+
Sbjct: 265 TERDAQSAVVTHLHG--------RPALLVSSTSWTEDEDFSVLLAALEKFEQ----LIND 312
Query: 294 DDS 296
+S
Sbjct: 313 GES 315
|
|
| MGI|MGI:2384774 Alg1 "asparagine-linked glycosylation 1 (beta-1,4-mannosyltransferase)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 465 (168.7 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 110/287 (38%), Positives = 161/287 (56%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GR VVVLGD+GRSPRMQY ALSLA Q V ++ + SKP +L++ I I +
Sbjct: 30 GRARHMVVVVLGDVGRSPRMQYHALSLA-QSGFSVTLLGFYNSKPRDELLQNDRIRIVKL 88
Query: 62 TQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
T RG Q LLW + + +FL QNPP +P +AV W
Sbjct: 89 TDL----RGLGAGPRILQYGVKVVFQAVYLLWKMMRMDPAAYIFL-QNPPGLPA-IAVCW 142
Query: 122 -ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
+ S ++DWHN+GY+++ L G R V + +W EK++G++++ LCVT AM+ +
Sbjct: 143 FVGCICGSKLVIDWHNYGYSIMGLVHGPRHPIVLLAKWYEKFFGRLSHLNLCVTNAMRED 202
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVS-NGMEGQKAD 239
LA+NW ++A LYD+P FF T L+ +HELF +L+ + P Q C + + +++
Sbjct: 203 LAENWCVRAVTLYDKPASFFKETPLDLQHELFMKLSHT-YSPF--QSCSDPSHPDTERSA 259
Query: 240 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRR 286
T +G+ V RPAL+VSSTSWT DEDF ILL A ++++
Sbjct: 260 FTERDCQSGV-VRRLHGRPALLVSSTSWTEDEDFSILLRALEKFEQQ 305
|
|
| UNIPROTKB|Q9BT22 ALG1 "Chitobiosyldiphosphodolichol beta-mannosyltransferase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 469 (170.2 bits), Expect = 1.8e-66, Sum P(2) = 1.8e-66
Identities = 112/290 (38%), Positives = 162/290 (55%)
Query: 3 RRGRAC----VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHI 58
RRGRA VVLGD+GRSPRMQY ALSLA V ++ + SKPH +L++ I I
Sbjct: 27 RRGRAARHVVAVVLGDVGRSPRMQYHALSLAMH-GFSVTLLGFCNSKPHDELLQNNRIQI 85
Query: 59 HTMTQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVA 118
+T+ ++ G +Q LLW L + +FL QNPP +P+ +A
Sbjct: 86 VGLTELQSLAVGPRVFQYGVKVV----LQAMYLLWKLMWREPGAYIFL-QNPPGLPS-IA 139
Query: 119 VKW-ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177
V W L S ++DWHN+GY+++ L G V + +W EK++G++++ LCVT AM
Sbjct: 140 VCWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVTNAM 199
Query: 178 QHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQK 237
+ +LA NW I+A +YD+P FF T L+ +H LF +L +H P + + E
Sbjct: 200 REDLADNWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGS-MHSPFRAR----SEPEDPV 254
Query: 238 ADETIFTSL-AGIDVFLK-PNRPALVVSSTSWTPDEDFGILLEAALMYDR 285
+ + FT AG + + RPAL+VSSTSWT DEDF ILL A +++
Sbjct: 255 TERSAFTERDAGSGLVTRLRERPALLVSSTSWTEDEDFSILLAALEKFEQ 304
|
|
| UNIPROTKB|F1N2J7 ALG1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 476 (172.6 bits), Expect = 2.9e-66, Sum P(2) = 2.9e-66
Identities = 116/291 (39%), Positives = 164/291 (56%)
Query: 2 GRRGR-ACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
GR R VVVLGD+GRSPRMQY ALSLA+ V ++ + SKPH +L+ I I
Sbjct: 29 GRTARHVIVVVLGDVGRSPRMQYHALSLAKS-GFSVTLLGFCNSKPHDELLQSDKIQIVG 87
Query: 61 MTQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLW-FLCVKIASPDVFLVQNPPSVPTLVAV 119
+T + G Q LLW +C + A+ +FL QNPP +P +V
Sbjct: 88 LTDLQRLAVGPHVLQYGVKVV----FQAVHLLWKLMCTEPAAY-IFL-QNPPGLPAIVVC 141
Query: 120 KWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179
+A LR S +VDWHN+GY+++ L G V + +W EK G++++ LCVT AM+
Sbjct: 142 WFAGCLRGSKLVVDWHNYGYSIMGLVHGPSHPLVLLAKWYEKLCGRLSHLNLCVTNAMRD 201
Query: 180 ELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKAD 239
+LA+NWGIKA +YD+P FF T L+ +H+LF +L+ P+ + C + G +
Sbjct: 202 DLAENWGIKAVTVYDKPASFFKETPLDLQHQLFVKLSHTY--PV-FRACSESSDPG--TE 256
Query: 240 ETIFT---SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRV 287
+ FT +L+G L RPAL+VSSTSWT DEDF ILL A ++ +
Sbjct: 257 RSAFTERDALSGAVTHLC-GRPALLVSSTSWTEDEDFSILLAALEKFEHLI 306
|
|
| RGD|1310700 Alg1 "ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 463 (168.0 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 110/287 (38%), Positives = 161/287 (56%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GR VVVLGD+GRSPRMQY ALSLA Q V ++ + SKP +L+ I I +
Sbjct: 30 GRARHVVVVVLGDVGRSPRMQYHALSLA-QSGFSVTLLGFYNSKPRDELLQSDRIQIVKL 88
Query: 62 TQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
T RG Q LLW + + +FL QNPP +P +AV W
Sbjct: 89 TDL----RGLGAGPRILQYGVKVVFQAVYLLWKMMRTDPAAYIFL-QNPPGLPA-IAVCW 142
Query: 122 -ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
+ S ++DWHN+GY+++ L G R V + +W EK++G++++ LCVT AM+ +
Sbjct: 143 FVCCICGSKLVIDWHNYGYSIMGLVHGPRHPIVLLAKWYEKFFGRLSHLNLCVTHAMRED 202
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVS-NGMEGQKAD 239
LA+NW ++A LYD+P FF T L+ +HELF +L++ + P Q C + + +++
Sbjct: 203 LAENWCLRAVTLYDKPASFFKETPLDLQHELFMKLSRT-YSPF--QSCSEPSDPDTERSA 259
Query: 240 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRR 286
T S + + V RPAL+VSSTSWT DEDF ILL A ++++
Sbjct: 260 FTERDSQSRV-VRRLHGRPALLVSSTSWTEDEDFSILLRALEKFEQQ 305
|
|
| UNIPROTKB|D4A5S6 Alg1 "Protein Alg1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 463 (168.0 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 110/287 (38%), Positives = 161/287 (56%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GR VVVLGD+GRSPRMQY ALSLA Q V ++ + SKP +L+ I I +
Sbjct: 30 GRARHVVVVVLGDVGRSPRMQYHALSLA-QSGFSVTLLGFYNSKPRDELLQSDRIQIVKL 88
Query: 62 TQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
T RG Q LLW + + +FL QNPP +P +AV W
Sbjct: 89 TDL----RGLGAGPRILQYGVKVVFQAVYLLWKMMRTDPAAYIFL-QNPPGLPA-IAVCW 142
Query: 122 -ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
+ S ++DWHN+GY+++ L G R V + +W EK++G++++ LCVT AM+ +
Sbjct: 143 FVCCICGSKLVIDWHNYGYSIMGLVHGPRHPIVLLAKWYEKFFGRLSHLNLCVTHAMRED 202
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVS-NGMEGQKAD 239
LA+NW ++A LYD+P FF T L+ +HELF +L++ + P Q C + + +++
Sbjct: 203 LAENWCLRAVTLYDKPASFFKETPLDLQHELFMKLSRT-YSPF--QSCSEPSDPDTERSA 259
Query: 240 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRR 286
T S + + V RPAL+VSSTSWT DEDF ILL A ++++
Sbjct: 260 FTERDSQSRV-VRRLHGRPALLVSSTSWTEDEDFSILLRALEKFEQQ 305
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 414 | |||
| PLN02275 | 371 | PLN02275, PLN02275, transferase, transferring glyc | 0.0 | |
| cd03816 | 415 | cd03816, GT1_ALG1_like, This family is most closel | 1e-164 | |
| cd03794 | 394 | cd03794, GT1_wbuB_like, This family is most closel | 3e-08 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 1e-06 | |
| pfam13579 | 158 | pfam13579, Glyco_trans_4_4, Glycosyl transferase 4 | 4e-04 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 4e-04 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 0.002 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 0.002 |
| >gnl|CDD|215155 PLN02275, PLN02275, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 592 bits (1527), Expect = 0.0
Identities = 254/381 (66%), Positives = 276/381 (72%), Gaps = 55/381 (14%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
MGRRGRA VVVLGD GRSPRMQY ALSLARQ S +VDVVAYGGS+P A+L HPSIHIH
Sbjct: 1 MGRRGRAAVVVLGDFGRSPRMQYHALSLARQASFQVDVVAYGGSEPIPALLNHPSIHIHL 60
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M Q P + + LP+VL + LLLK IQF MLLWFLCVKI PDVFLVQNPPSVPTL VK
Sbjct: 61 MVQ-PRLLQRLPRVLYALALLLKVAIQFLMLLWFLCVKIPRPDVFLVQNPPSVPTLAVVK 119
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
A LRR+ F++DWHNFGYTLL+LSLGR V +YRW E++YGKMA+G LCVT+AMQHE
Sbjct: 120 LACWLRRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAMQHE 179
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240
L QNWGI+ATVLYDQPPEFF P SLE
Sbjct: 180 LDQNWGIRATVLYDQPPEFFRPASLE---------------------------------- 205
Query: 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEE 300
+ L+PNRPALVVSSTSWTPDEDFGILLEAA+MYDRRVAA LNE DS
Sbjct: 206 ----------IRLRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDS---- 251
Query: 301 VFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG 360
+ GKQ LYPRLLFIITGKGP K YEEKI RL L+ VAFRTMWL AEDYPLLLG
Sbjct: 252 ------ASGKQSLYPRLLFIITGKGPQKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLG 305
Query: 361 SADLGVCLHTSSSGLDLPMKV 381
SADLGV LHTSSSGLDLPMKV
Sbjct: 306 SADLGVSLHTSSSGLDLPMKV 326
|
Length = 371 |
| >gnl|CDD|99986 cd03816, GT1_ALG1_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 466 bits (1201), Expect = e-164
Identities = 188/380 (49%), Positives = 232/380 (61%), Gaps = 50/380 (13%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
R R CV+VLGD+GRSPRMQY ALSLA+ +VD+V Y + PH IL +P+I IH +
Sbjct: 3 RKRVCVLVLGDIGRSPRMQYHALSLAK-HGWKVDLVGYLETPPHDEILSNPNITIHPL-- 59
Query: 64 WPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWAS 123
P P+ L K+ + LK L QFF LLW L K+ D L+QNPPS+PTL+
Sbjct: 60 -PPPPQRLNKLPFLLFAPLKVLWQFFSLLWLL-YKLRPADYILIQNPPSIPTLLIAWLYC 117
Query: 124 SLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQ 183
LRR+ I+DWHN+GYT+L+L LG V + +W EK +G++A+ LCVT+AM+ +L Q
Sbjct: 118 LLRRTKLIIDWHNYGYTILALKLGENHPLVRLAKWYEKLFGRLADYNLCVTKAMKEDLQQ 177
Query: 184 --NWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADET 241
NW I+ATVLYD+PPE F P LEEKHELF +L K
Sbjct: 178 FNNWKIRATVLYDRPPEQFRPLPLEEKHELFLKLAK----------------------TF 215
Query: 242 IFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEV 301
+ L V L RPAL+VSSTSWTPDEDFGILL+A + Y++ A
Sbjct: 216 LTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAA---TGPKL----- 267
Query: 302 FLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS 361
P+LL IITGKGP KE Y E+I+ L+LK+V RT WLSAEDYP LL S
Sbjct: 268 -------------PKLLCIITGKGPLKEKYLERIKELKLKKVTIRTPWLSAEDYPKLLAS 314
Query: 362 ADLGVCLHTSSSGLDLPMKV 381
ADLGV LHTSSSGLDLPMKV
Sbjct: 315 ADLGVSLHTSSSGLDLPMKV 334
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. Length = 415 |
| >gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 3e-08
Identities = 69/365 (18%), Positives = 126/365 (34%), Gaps = 90/365 (24%)
Query: 14 DLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPS------IHIHTMTQW-PT 66
G + R A L ++ EV V+ + P I + + +H P
Sbjct: 13 LGGGAFRTTELAEELVKR-GHEVTVITGSPNYPSGKIYKGYKREEVDGVRVH----RVPL 67
Query: 67 IPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLR 126
P +LK +L L L L + PDV + +PP + +A + L+
Sbjct: 68 PPYKKNGLLKRLLNYLS---FALSALLALLKRRRRPDVIIATSPP-LLIALAALLLARLK 123
Query: 127 RSAFIVDWHN-FGYTLLSLSLGRRSHF-VSIYRWIEKYYGKMANGCLCVTQAMQHELAQN 184
+ F+++ + + + ++L L + + R +E+ + A+ + ++ M+ E
Sbjct: 124 GAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGMR-EYLVR 182
Query: 185 WGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFT 244
G+ KI + NG D +F
Sbjct: 183 RGVPP--------------------------EKIS--------VIPNG-----VDLELFK 203
Query: 245 SLAGIDVFLKPNRPA---LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEV 301
+ K +V+ + + + LLEAA A+L +
Sbjct: 204 PPPADESLRKELGLDDKFVVLYAGNIGRAQGLDTLLEAA--------ALLKD-------- 247
Query: 302 FLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS 361
P + F+I G GP+KE +E + L L V F + E+ P LL +
Sbjct: 248 ------------RPDIRFLIVGDGPEKEELKELAKALGLDNVTF-LGRVPKEELPELLAA 294
Query: 362 ADLGV 366
AD+G+
Sbjct: 295 ADVGL 299
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 1e-06
Identities = 32/201 (15%), Positives = 61/201 (30%), Gaps = 31/201 (15%)
Query: 21 MQYQALSLARQMSL---EVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKP 77
+ L LAR ++ EV V+ G + +
Sbjct: 16 AERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVR--------------PPPL 61
Query: 78 VLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNF 137
+ + L+ L ++ DV + ++ L ++ H
Sbjct: 62 LRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAALAAR---LLGIPLVLTVHGL 118
Query: 138 GYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGI---KATVLY- 193
+ LG R +E+ + A+ + V++A + EL + G+ K TV+
Sbjct: 119 EFGRPGNELGLLLKL---ARALERRALRRADRIIAVSEATREELRELGGVPPEKITVIPN 175
Query: 194 --DQPPEFFHPTSLEEKHELF 212
D E F P + L
Sbjct: 176 GVD--TERFRPAPRAARRRLG 194
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|222237 pfam13579, Glyco_trans_4_4, Glycosyl transferase 4-like domain | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 4e-04
Identities = 37/172 (21%), Positives = 60/172 (34%), Gaps = 28/172 (16%)
Query: 21 MQYQALSLARQMS---LEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKP 77
+ L LAR ++ EV VV G P LE + +H + P R
Sbjct: 3 AERYVLELARALAARGHEVTVVTPRGP-PGRPELEEDGVRVHRL---PVPRRPSL----- 53
Query: 78 VLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNF 137
L+ L + LL + PDV P + + + A+ R +V H
Sbjct: 54 -PGDLRALRRLRRLL-----RRERPDVVHAHGPLA---GLLARLAARRRGVPVVVTPHGL 104
Query: 138 GYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKA 189
S R + R +E+ + A+ + V++A L G+ A
Sbjct: 105 ALRQGSGLKRR------LARALERRLLRRADAVVAVSEAEAELLRA-LGVPA 149
|
Length = 158 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 42/209 (20%), Positives = 69/209 (33%), Gaps = 24/209 (11%)
Query: 16 GRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVL 75
G ++ A +LA++ +EV V+A G P L + L K
Sbjct: 15 GGGIFVKELARALAKR-GVEVTVLAPGPWGPKLLDLLKGRLVGVERLPVLLPVVPLLKGP 73
Query: 76 KPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWH 135
LL + L++ L F PD+ + P A +V H
Sbjct: 74 LLYLLAARALLKLLKLKRF------RPDLIHAHF--AYPDGFAAALLKRKLGIPLVVTLH 125
Query: 136 NFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLY 193
LL + R + + + A+ + V++A+ EL K TV+
Sbjct: 126 GSDVNLLP--------RKRLLRALLRRALRRADAVIAVSEALADELKALGIDPEKVTVIP 177
Query: 194 ---DQPPEFFHPTSLEEKHELFCRLNKIL 219
D E F P E +L +K +
Sbjct: 178 NGVD--TERFSPADRAEARKLGLPEDKKV 204
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 39.9 bits (92), Expect = 0.002
Identities = 53/333 (15%), Positives = 103/333 (30%), Gaps = 78/333 (23%)
Query: 47 HAAILEHPSIHIHTMTQWPTIPRGLPKV---LKPVLLLLKPLIQFFMLLWFLCVKIASPD 103
A L + + G+ + + LL+ L + L L ++ D
Sbjct: 26 KALRLLGRGHEVLVIAPEKLEGLGIEVLRLPSVSLPLLIVRLRPALLRLLLLLKRLLPYD 85
Query: 104 VFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVS--IYRWIEK 161
+ + P + L +V H +L L + + + ++K
Sbjct: 86 IIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLKRLKK 145
Query: 162 YYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQ 221
+A+ + V+ A++ L NKI+
Sbjct: 146 ALRLLADRVIAVSPALKELLEALGVP----------------------------NKIVVI 177
Query: 222 PLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAAL 281
P G+ D F + A I + + + ++ P++ +L+EAA
Sbjct: 178 PNGI-------------DTEKF-APARIGLLPEGGKFVVLYVGR-LDPEKGLDLLIEAAA 222
Query: 282 MYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYEEKIRRLRL 340
+R P + +I G GP++ E E+ ++L L
Sbjct: 223 KLKKR---------------------------GPDIKLVIVGDGPERREELEKLAKKLGL 255
Query: 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS 373
+ ++ E+ LL SAD V + S S
Sbjct: 256 EDNVKFLGYVPDEELAELLASAD--VFVLPSLS 286
|
Length = 381 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.002
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 312 YLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADL 364
P + +I G GP++E EE R L L RV F T ++ E+ P +ADL
Sbjct: 229 KEEPDVKLVIVGDGPEREELEELARELGLADRVIF-TGFVPREELPDYYKAADL 281
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 414 | |||
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 100.0 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 100.0 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.98 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.98 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.98 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.98 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.97 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.97 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.97 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.97 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.97 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.97 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.97 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.97 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.97 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.97 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.97 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.97 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 99.96 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.96 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.96 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.96 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.96 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.96 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.96 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.96 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.96 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.96 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.95 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.95 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.95 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.95 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.95 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.95 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.95 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.95 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.95 | |
| PLN02316 | 1036 | synthase/transferase | 99.95 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.95 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.95 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.95 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.95 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.94 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.94 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.94 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.94 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.94 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.93 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.93 | |
| PLN00142 | 815 | sucrose synthase | 99.93 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.92 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.92 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.92 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.92 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.91 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.91 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.9 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.9 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.9 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.89 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.89 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.88 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.86 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.84 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.82 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.81 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.78 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.77 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.76 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.76 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.76 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.76 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.72 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.71 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.69 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.68 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.66 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.61 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.6 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.55 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.54 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.49 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.48 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.48 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.39 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 99.28 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.25 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.17 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 99.16 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.06 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.03 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.03 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.0 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 98.94 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.88 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.79 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.75 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 98.73 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 98.5 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 98.45 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.39 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.31 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 98.21 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 98.21 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.19 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 98.14 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.1 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.09 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.02 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 97.91 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 97.89 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 97.77 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 97.72 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 97.65 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 97.64 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 97.64 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 97.59 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 97.57 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 97.56 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 97.43 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 97.4 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 97.35 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 97.3 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 97.26 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 97.12 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 97.09 | |
| PF11997 | 268 | DUF3492: Domain of unknown function (DUF3492); Int | 97.02 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 96.92 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 96.84 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 96.75 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 96.49 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 96.46 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 96.16 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 96.09 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 95.84 | |
| PF08660 | 170 | Alg14: Oligosaccharide biosynthesis protein Alg14 | 95.81 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 95.05 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 94.89 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 94.59 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 94.49 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 94.33 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 94.31 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 94.27 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 93.41 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 93.11 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 92.62 | |
| COG2327 | 385 | WcaK Polysaccharide pyruvyl transferase family pro | 92.57 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 91.68 | |
| PF06925 | 169 | MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy | 90.66 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 89.77 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 88.84 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 88.32 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 84.35 | |
| KOG3349 | 170 | consensus Predicted glycosyltransferase [General f | 83.32 |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-63 Score=488.36 Aligned_cols=377 Identities=51% Similarity=0.813 Sum_probs=330.4
Q ss_pred CCCCCEEEEEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHH
Q 015058 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLL 80 (414)
Q Consensus 1 ~~~~~~~~v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~ 80 (414)
|+.++|++|+|+||.|+||||+|||.+||+. |++|+++++.++.|..++.++|+|+||.++..+. ....++.+.+
T Consensus 9 ~~~k~ra~vvVLGDvGRSPRMqYHA~Sla~~-gf~VdliGy~~s~p~e~l~~hprI~ih~m~~l~~----~~~~p~~~~l 83 (444)
T KOG2941|consen 9 KSKKKRAIVVVLGDVGRSPRMQYHALSLAKL-GFQVDLIGYVESIPLEELLNHPRIRIHGMPNLPF----LQGGPRVLFL 83 (444)
T ss_pred ccccceEEEEEecccCCChHHHHHHHHHHHc-CCeEEEEEecCCCChHHHhcCCceEEEeCCCCcc----cCCCchhhhh
Confidence 5678899999999999999999999999997 9999999999998999999999999999994332 4445667788
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchh-hhhhccCCCcHHHHHHHHH
Q 015058 81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYT-LLSLSLGRRSHFVSIYRWI 159 (414)
Q Consensus 81 l~k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~-l~~~~~~~~~~~~~i~~~~ 159 (414)
++|.++|+++++|+++. ...+|++++||||++|+++++.+++.++|.++|+||||+.|+ ++.++.|....+.++.+|+
T Consensus 84 ~lKvf~Qfl~Ll~aL~~-~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~~~~g~~h~lV~l~~~~ 162 (444)
T KOG2941|consen 84 PLKVFWQFLSLLWALFV-LRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLKLKLGFQHPLVRLVRWL 162 (444)
T ss_pred HHHHHHHHHHHHHHHHh-ccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHHhhcCCCCchHHHHHHH
Confidence 99999999999999987 589999999999999999999999999999999999999998 5666778888999999999
Q ss_pred HHHHhccCCEEEEeCHHHHHHHHHhhCCc-EEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCC
Q 015058 160 EKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238 (414)
Q Consensus 160 Ek~~~k~ad~ii~vS~~~~~~l~~~~gi~-i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 238 (414)
|++++|+||.-+|||++|+++|.|+||+. +.++|+.|++ +|++.+++|+++++++.+. -.+-+.--++...
T Consensus 163 E~~fgk~a~~nLcVT~AMr~dL~qnWgi~ra~v~YDrPps--~~~~l~~~H~lf~~l~~d~------~~f~ar~~q~~~~ 234 (444)
T KOG2941|consen 163 EKYFGKLADYNLCVTKAMREDLIQNWGINRAKVLYDRPPS--KPTPLDEQHELFMKLAGDH------SPFRAREPQDKAL 234 (444)
T ss_pred HHHhhcccccchhhHHHHHHHHHHhcCCceeEEEecCCCC--CCCchhHHHHHHhhhcccc------chhhhcccccchh
Confidence 99999999999999999999999999985 8999999887 8888889999999886421 0122222344455
Q ss_pred ccceeeeccc-cccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcE
Q 015058 239 DETIFTSLAG-IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRL 317 (414)
Q Consensus 239 ~~~~~~~~~~-~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i 317 (414)
+++.|+--+. |++...+++|++++++++|+|++++.+|++|+.++.+.. .+ +.-.+|++
T Consensus 235 ~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~-------------------~~-~~~~lP~l 294 (444)
T KOG2941|consen 235 ERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQL-------------------YD-KTHNLPSL 294 (444)
T ss_pred hhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhh-------------------hh-ccCCCCcE
Confidence 5666765444 778888999999999999999999999999999875421 11 11247999
Q ss_pred EEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee-
Q 015058 318 LFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT- 396 (414)
Q Consensus 318 ~liI~G~G~~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~- 396 (414)
..+|+|+||.+|.|.++|+++++++|.+.++|+..||||.++++||++||+|+|+||++||||+++...||+||+|.+.
T Consensus 295 lciITGKGPlkE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fk 374 (444)
T KOG2941|consen 295 LCIITGKGPLKEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFK 374 (444)
T ss_pred EEEEcCCCchhHHHHHHHHHhcccceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecch
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999664
Q ss_pred -------CCcccchhhhhhhhh
Q 015058 397 -------CSVVGCLFVLFLTLA 411 (414)
Q Consensus 397 -------~~~~~~~~~~~~~~~ 411 (414)
.|++|++|.-...||
T Consensus 375 cl~ELVkh~eNGlvF~Ds~eLa 396 (444)
T KOG2941|consen 375 CLDELVKHGENGLVFEDSEELA 396 (444)
T ss_pred hHHHHHhcCCCceEeccHHHHH
Confidence 689999998776665
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-47 Score=385.24 Aligned_cols=343 Identities=74% Similarity=1.174 Sum_probs=265.1
Q ss_pred CCCCCEEEEEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHH
Q 015058 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLL 80 (414)
Q Consensus 1 ~~~~~~~~v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~ 80 (414)
|||+++++|++++|+|.++||+.++.+++++.+++|+|+|+....+..+..+..++++++++. +......++....+.+
T Consensus 1 ~~~~~~~~~~~~~~~g~~~r~~~~~~~l~~~~~~~v~vi~~~~~~~~~~~~~~~~v~v~r~~~-~~~~~~~~~~~~~~~~ 79 (371)
T PLN02275 1 MGRRGRAAVVVLGDFGRSPRMQYHALSLARQASFQVDVVAYGGSEPIPALLNHPSIHIHLMVQ-PRLLQRLPRVLYALAL 79 (371)
T ss_pred CCCccEEEEEEecCCCCCHHHHHHHHHHHhcCCceEEEEEecCCCCCHHHhcCCcEEEEECCC-cccccccccchHHHHH
Confidence 899999999999999999999999999999733589999987765555555677899999973 2211122333333345
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHH
Q 015058 81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIE 160 (414)
Q Consensus 81 l~k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~E 160 (414)
+....+.+..+.|.++.+..+||+||+|+||....++++.++++..+.|+|+++|+..++........++.+.++++++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~e 159 (371)
T PLN02275 80 LLKVAIQFLMLLWFLCVKIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYE 159 (371)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhcccCCCCHHHHHHHHHH
Confidence 66666677778887655568999999999876666667788888889999999999754333333334556678899999
Q ss_pred HHHhccCCEEEEeCHHHHHHHHHhhCCcEEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCcc
Q 015058 161 KYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240 (414)
Q Consensus 161 k~~~k~ad~ii~vS~~~~~~l~~~~gi~i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (414)
+++++.||.++|+|+.+++.+.+.+|+++.+|||++.+.|.|.... . .
T Consensus 160 ~~~~~~ad~ii~~S~~~~~~l~~~~g~~i~vi~n~~~~~f~~~~~~--~----~-------------------------- 207 (371)
T PLN02275 160 RHYGKMADGHLCVTKAMQHELDQNWGIRATVLYDQPPEFFRPASLE--I----R-------------------------- 207 (371)
T ss_pred HHHHhhCCEEEECCHHHHHHHHHhcCCCeEEECCCCHHHcCcCCch--h----c--------------------------
Confidence 9999999999999999999998877888889999976777765321 0 0
Q ss_pred ceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEE
Q 015058 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI 320 (414)
Q Consensus 241 ~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~li 320 (414)
+.++.+.+++++||+.++||++.|++|+..+..+.+...+-+ .++ ++.+..+|+++|+
T Consensus 208 ------------~~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~------~~~----~~~~~~~~~i~l~ 265 (371)
T PLN02275 208 ------------LRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNES------DSA----SGKQSLYPRLLFI 265 (371)
T ss_pred ------------ccCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccc------ccc----ccccccCCCeEEE
Confidence 112234578899999999999999999998864322111100 000 0111236789999
Q ss_pred EEcCCCChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 321 ITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 321 I~G~G~~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
|+|+|+++++++++++++|+++|.|.+++++++|++.+|++||++|+++.++.++++|+|++||||||+|||+++++|
T Consensus 266 ivG~G~~~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg 343 (371)
T PLN02275 266 ITGKGPQKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC 343 (371)
T ss_pred EEeCCCCHHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCC
Confidence 999999999999999999999999987789999999999999999976555557889999999999999999998754
|
|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-45 Score=372.59 Aligned_cols=347 Identities=53% Similarity=0.850 Sum_probs=262.4
Q ss_pred CCCEEEEEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHH
Q 015058 3 RRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLL 82 (414)
Q Consensus 3 ~~~~~~v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~ 82 (414)
.+||++++++++++.+.|+.+++++|+++ ||+|+|+|+....+..+.....+++++.++ ... ....+.++.+.++.
T Consensus 2 ~~~~~~~~~~~~~~~~~R~~~~a~~L~~~-G~~V~ii~~~~~~~~~~~~~~~~v~~~~~~--~~~-~~~~~~~~~~~~~~ 77 (415)
T cd03816 2 KRKRVCVLVLGDIGRSPRMQYHALSLAKH-GWKVDLVGYLETPPHDEILSNPNITIHPLP--PPP-QRLNKLPFLLFAPL 77 (415)
T ss_pred CccEEEEEEecccCCCHHHHHHHHHHHhc-CceEEEEEecCCCCCHHHhcCCCEEEEECC--CCc-cccccchHHHHHHH
Confidence 57999999999999999999999999996 999999998765433333456789999987 332 01223445556666
Q ss_pred HHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHH
Q 015058 83 KPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKY 162 (414)
Q Consensus 83 k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~ 162 (414)
+.+.+++.++|.++. ..+||+||+|+||..+++.++++++++.+.|+|++||++.++......+..+.+.++++|+|++
T Consensus 78 ~~~~~~~~~~~~l~~-~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~ 156 (415)
T cd03816 78 KVLWQFFSLLWLLYK-LRPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILALKLGENHPLVRLAKWYEKL 156 (415)
T ss_pred HHHHHHHHHHHHHHh-cCCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhcccCCCCHHHHHHHHHHHH
Confidence 666666677776543 3789999999987777777788888888999999999975444333344455667788999999
Q ss_pred HhccCCEEEEeCHHHHHHHHHhhCCc---EEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCc
Q 015058 163 YGKMANGCLCVTQAMQHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKAD 239 (414)
Q Consensus 163 ~~k~ad~ii~vS~~~~~~l~~~~gi~---i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 239 (414)
+++.||.|+|+|+.+++++.+ ++.+ +.+|||++.+.|.|.+.........++.. +
T Consensus 157 ~~~~ad~ii~vS~~~~~~l~~-~~~~~~ki~vI~Ng~~~~f~p~~~~~~~~~~~~~~~------------------~--- 214 (415)
T cd03816 157 FGRLADYNLCVTKAMKEDLQQ-FNNWKIRATVLYDRPPEQFRPLPLEEKHELFLKLAK------------------T--- 214 (415)
T ss_pred HhhcCCEeeecCHHHHHHHHh-hhccCCCeeecCCCCHHHceeCcHHHHHHHHHhccc------------------c---
Confidence 999999999999999999987 4543 89999997777888753221111110000 0
Q ss_pred cceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEE
Q 015058 240 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF 319 (414)
Q Consensus 240 ~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~l 319 (414)
......+.+..++.++++.+++++||+.++||++.|++|++.+++.. .+ ...+|+++|
T Consensus 215 -~~~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~-------------------~~--~~~~~~i~l 272 (415)
T cd03816 215 -FLTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSA-------------------AT--GPKLPKLLC 272 (415)
T ss_pred -ccccccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhh-------------------cc--cccCCCEEE
Confidence 00000001112233455568889999999999999999999987521 00 013578999
Q ss_pred EEEcCCCChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 320 IITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 320 iI~G~G~~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
+|+|+|++++++++++++++++++.|++++++.++++.+|++||++|+++.++.++++|+|++||||||+|||+++++|
T Consensus 273 ~ivG~G~~~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~ 351 (415)
T cd03816 273 IITGKGPLKEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKC 351 (415)
T ss_pred EEEecCccHHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCC
Confidence 9999999999999999999999888776699999999999999999977665667889999999999999999999753
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-36 Score=302.66 Aligned_cols=305 Identities=16% Similarity=0.148 Sum_probs=218.6
Q ss_pred hHHHHHHHHHHhhCCCcEEEEecCCCCCCc-----------ccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHH
Q 015058 19 PRMQYQALSLARQMSLEVDVVAYGGSKPHA-----------AILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQ 87 (414)
Q Consensus 19 ~r~~~~a~~La~~~g~eV~vv~~~~~~~~~-----------~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~ 87 (414)
.++...++.|.++ ||+|+|+|..+..+.. .....+++++++++.+.. . . +..+..+......
T Consensus 19 ~~~~~l~~~L~~~-G~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~~~--~-~---~~~~~~~~~~~~~ 91 (412)
T PRK10307 19 KYTGEMAEWLAAR-GHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPLYVP--K-Q---PSGLKRLLHLGSF 91 (412)
T ss_pred hhHHHHHHHHHHC-CCeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccccCC--C-C---ccHHHHHHHHHHH
Confidence 3566788888886 9999999976432211 112246899999984321 1 1 1112222221111
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhh-hhhccCCCcHHHHHHHHHHHHHhc
Q 015058 88 FFMLLWFLCVK-IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTL-LSLSLGRRSHFVSIYRWIEKYYGK 165 (414)
Q Consensus 88 ~~~l~~~l~~k-~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l-~~~~~~~~~~~~~i~~~~Ek~~~k 165 (414)
.+..+..+..+ ..+||+||+|+|+. .+.+++.+++++.++|+|+++|++.... ...+..+.+.+.++..++|+++++
T Consensus 92 ~~~~~~~~~~~~~~~~Div~~~~p~~-~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (412)
T PRK10307 92 ALSSFFPLLAQRRWRPDRVIGVVPTL-FCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLR 170 (412)
T ss_pred HHHHHHHHhhccCCCCCEEEEeCCcH-HHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHh
Confidence 11111111111 26899999998742 2345566778888999999999864221 111121344556777889999999
Q ss_pred cCCEEEEeCHHHHHHHHHhhCCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccc
Q 015058 166 MANGCLCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADET 241 (414)
Q Consensus 166 ~ad~ii~vS~~~~~~l~~~~gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (414)
.||.++++|+.+++.+.+. +.+ +.+|||| |.+.|.|.+...+.++++++
T Consensus 171 ~ad~ii~~S~~~~~~~~~~-~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~-------------------------- 223 (412)
T PRK10307 171 RFDNVSTISRSMMNKAREK-GVAAEKVIFFPNWSEVARFQPVADADVDALRAQL-------------------------- 223 (412)
T ss_pred hCCEEEecCHHHHHHHHHc-CCCcccEEEECCCcCHhhcCCCCccchHHHHHHc--------------------------
Confidence 9999999999999998764 653 7899999 77778765422233455443
Q ss_pred eeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEE
Q 015058 242 IFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII 321 (414)
Q Consensus 242 ~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI 321 (414)
++++++ .+++|+|++.++||++.|++|++.+.+ .|+++|+|
T Consensus 224 ----------~~~~~~-~~i~~~G~l~~~kg~~~li~a~~~l~~----------------------------~~~~~l~i 264 (412)
T PRK10307 224 ----------GLPDGK-KIVLYSGNIGEKQGLELVIDAARRLRD----------------------------RPDLIFVI 264 (412)
T ss_pred ----------CCCCCC-EEEEEcCccccccCHHHHHHHHHHhcc----------------------------CCCeEEEE
Confidence 233344 589999999999999999999988753 57899999
Q ss_pred EcCCCChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCC-CCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 322 TGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 322 ~G~G~~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~-~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
+|+|+.+++++++++++++++|.|+| ++++++++.+|++||++|+++... .+..+|+|++||||||+|||+++++|
T Consensus 265 vG~g~~~~~l~~~~~~~~l~~v~f~G-~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g 341 (412)
T PRK10307 265 CGQGGGKARLEKMAQCRGLPNVHFLP-LQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPG 341 (412)
T ss_pred ECCChhHHHHHHHHHHcCCCceEEeC-CCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCC
Confidence 99999999999999999999999997 999999999999999999875432 13348999999999999999999876
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=277.87 Aligned_cols=281 Identities=10% Similarity=0.034 Sum_probs=201.3
Q ss_pred HHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhhc
Q 015058 20 RMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKI 99 (414)
Q Consensus 20 r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k~ 99 (414)
.+...++.|+++ ||+|+|+|..............+++++++|. ............+. .++.+.+ .+ +.
T Consensus 19 ~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~i~v~~~p~--~~~~~~~~~~~~~~-~~~~l~~-------~~-~~ 86 (398)
T cd03796 19 HIYQLSQCLIKR-GHKVVVITHAYGNRVGIRYLTNGLKVYYLPF--VVFYNQSTLPTFFG-TFPLLRN-------IL-IR 86 (398)
T ss_pred HHHHHHHHHHHc-CCeeEEEeccCCcCCCcccccCceeEEEecc--eeccCCccccchhh-hHHHHHH-------HH-Hh
Confidence 455667778775 9999999976432222223356899999873 21110111111111 1111111 11 23
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~ 179 (414)
.+||+||+|++... ....+.++++..++|+|++.|+... + .........+++++.++.+|.++|+|+.+.+
T Consensus 87 ~~~DiIh~~~~~~~-~~~~~~~~~~~~~~~~v~t~h~~~~------~--~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~ 157 (398)
T cd03796 87 ERITIVHGHQAFSA-LAHEALLHARTMGLKTVFTDHSLFG------F--ADASSIHTNKLLRFSLADVDHVICVSHTSKE 157 (398)
T ss_pred cCCCEEEECCCCch-HHHHHHHHhhhcCCcEEEEeccccc------c--cchhhHHhhHHHHHhhccCCEEEEecHhHhh
Confidence 79999999987321 2234566677789999999998521 1 1111122345667888999999999999998
Q ss_pred HHHHhhCCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCC
Q 015058 180 ELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (414)
Q Consensus 180 ~l~~~~gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 255 (414)
.+....+.+ +.+|||| |.+.|.|.... .++
T Consensus 158 ~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~~----------------------------------------------~~~ 191 (398)
T cd03796 158 NTVLRASLDPERVSVIPNAVDSSDFTPDPSK----------------------------------------------RDN 191 (398)
T ss_pred HHHHHhCCChhhEEEEcCccCHHHcCCCccc----------------------------------------------CCC
Confidence 765444543 7899999 76666554210 012
Q ss_pred CCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHH
Q 015058 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 335 (414)
Q Consensus 256 ~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i 335 (414)
++ ++++++||+.++||++.|++|++.+.+ +.|+++|+|+|+|+.++.+++++
T Consensus 192 ~~-~~i~~~grl~~~Kg~~~li~a~~~l~~---------------------------~~~~~~l~i~G~g~~~~~l~~~~ 243 (398)
T cd03796 192 DK-ITIVVISRLVYRKGIDLLVGIIPEICK---------------------------KHPNVRFIIGGDGPKRILLEEMR 243 (398)
T ss_pred Cc-eEEEEEeccchhcCHHHHHHHHHHHHh---------------------------hCCCEEEEEEeCCchHHHHHHHH
Confidence 33 589999999999999999999998875 36789999999999999999999
Q ss_pred HHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 336 RRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 336 ~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
++++++ +|+|.| +++.++++.+|++||++|.++. .+++|++++||||||+|||+++++|.
T Consensus 244 ~~~~l~~~v~~~G-~~~~~~~~~~l~~ad~~v~pS~---~E~~g~~~~EAma~G~PVI~s~~gg~ 304 (398)
T cd03796 244 EKYNLQDRVELLG-AVPHERVRDVLVQGHIFLNTSL---TEAFCIAIVEAASCGLLVVSTRVGGI 304 (398)
T ss_pred HHhCCCCeEEEeC-CCCHHHHHHHHHhCCEEEeCCh---hhccCHHHHHHHHcCCCEEECCCCCc
Confidence 999998 899997 9999999999999999997643 47899999999999999999998875
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-32 Score=270.02 Aligned_cols=300 Identities=18% Similarity=0.198 Sum_probs=207.9
Q ss_pred CCCEEEEEEeCCCCCChHHHH-HHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHH
Q 015058 3 RRGRACVVVLGDLGRSPRMQY-QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLL 81 (414)
Q Consensus 3 ~~~~~~v~~~~d~~~~~r~~~-~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l 81 (414)
||+.++|+...+.|+..++.. .+..|.++ ||+++|++..+.....+.....++.+++++ ... ......+..+
T Consensus 1 ~~~il~ii~~~~~GG~e~~~~~l~~~l~~~-~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~--~~~----~~~~~~~~~l 73 (374)
T TIGR03088 1 RPLIVHVVYRFDVGGLENGLVNLINHLPAD-RYRHAVVALTEVSAFRKRIQRPDVAFYALH--KQP----GKDVAVYPQL 73 (374)
T ss_pred CceEEEEeCCCCCCcHHHHHHHHHhhcccc-ccceEEEEcCCCChhHHHHHhcCceEEEeC--CCC----CCChHHHHHH
Confidence 577888888777755544433 34555554 899999986543333333445788998887 221 1111111111
Q ss_pred HHHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeE-EEEEcCcchhhhhhccCCCcHHHHHHHHHH
Q 015058 82 LKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAF-IVDWHNFGYTLLSLSLGRRSHFVSIYRWIE 160 (414)
Q Consensus 82 ~k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~-Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~E 160 (414)
.+. + +..+||+||+|++ .+ ..+.+++++.++|. +.+.|..... .. ..+ ...+.+++
T Consensus 74 ~~~-----------l-~~~~~Divh~~~~---~~-~~~~~~~~~~~~~~~i~~~h~~~~~----~~-~~~--~~~~~~~~ 130 (374)
T TIGR03088 74 YRL-----------L-RQLRPDIVHTRNL---AA-LEAQLPAALAGVPARIHGEHGRDVF----DL-DGS--NWKYRWLR 130 (374)
T ss_pred HHH-----------H-HHhCCCEEEEcch---hH-HHHHHHHHhcCCCeEEEeecCcccc----cc-hhh--HHHHHHHH
Confidence 111 1 2379999999986 22 23344555567775 4456654210 01 111 12345677
Q ss_pred HHHhccCCEEEEeCHHHHHHHHHhhCCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCC
Q 015058 161 KYYGKMANGCLCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQ 236 (414)
Q Consensus 161 k~~~k~ad~ii~vS~~~~~~l~~~~gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 236 (414)
+++.+.+|.++|+|+.+++.+.+.++.+ +.+|||+ |.+.|.|... .+...+++.
T Consensus 131 ~~~~~~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~-~~~~~~~~~--------------------- 188 (374)
T TIGR03088 131 RLYRPLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRG-DRSPILPPD--------------------- 188 (374)
T ss_pred HHHHhcCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCcc-chhhhhHhh---------------------
Confidence 8888899999999999999998877754 7899999 7777876532 111222110
Q ss_pred CCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCc
Q 015058 237 KADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR 316 (414)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 316 (414)
..+ +.+++++++||+.++||++.|++|+..+.++.. + ..++
T Consensus 189 ---------------~~~-~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~-------------------~----~~~~ 229 (374)
T TIGR03088 189 ---------------FFA-DESVVVGTVGRLQAVKDQPTLVRAFALLVRQLP-------------------E----GAER 229 (374)
T ss_pred ---------------cCC-CCCeEEEEEecCCcccCHHHHHHHHHHHHHhCc-------------------c----cccc
Confidence 112 233599999999999999999999998875310 0 1247
Q ss_pred EEEEEEcCCCChHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEee
Q 015058 317 LLFIITGKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLW 395 (414)
Q Consensus 317 i~liI~G~G~~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~ 395 (414)
++|+++|+|+.++++++.+++++++ +|.|.| +.+|++.+|++||++|+|+ ..+++|++++|||+||+|||+|+
T Consensus 230 ~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g---~~~~~~~~~~~adi~v~pS---~~Eg~~~~~lEAma~G~Pvv~s~ 303 (374)
T TIGR03088 230 LRLVIVGDGPARGACEQMVRAAGLAHLVWLPG---ERDDVPALMQALDLFVLPS---LAEGISNTILEAMASGLPVIATA 303 (374)
T ss_pred eEEEEecCCchHHHHHHHHHHcCCcceEEEcC---CcCCHHHHHHhcCEEEecc---ccccCchHHHHHHHcCCCEEEcC
Confidence 9999999999999999999999998 899988 7899999999999999763 35789999999999999999999
Q ss_pred eCCc
Q 015058 396 TCSV 399 (414)
Q Consensus 396 ~~~~ 399 (414)
++|.
T Consensus 304 ~~g~ 307 (374)
T TIGR03088 304 VGGN 307 (374)
T ss_pred CCCc
Confidence 8754
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-32 Score=271.50 Aligned_cols=298 Identities=16% Similarity=0.111 Sum_probs=209.2
Q ss_pred hHHHHHHHHHHhhCCCcEEEEecCCCCCC-cccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHH-HHHHHHh
Q 015058 19 PRMQYQALSLARQMSLEVDVVAYGGSKPH-AAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFF-MLLWFLC 96 (414)
Q Consensus 19 ~r~~~~a~~La~~~g~eV~vv~~~~~~~~-~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~-~l~~~l~ 96 (414)
..+.+.+..|+++ ||+|+|+|...+... ......+++++++++..+. .... ...+ ...+..+. .+++.++
T Consensus 24 ~~v~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~--~~~~---~~~~~~~~~~~~~~~~ 95 (405)
T TIGR03449 24 VYILETATELARR-GIEVDIFTRATRPSQPPVVEVAPGVRVRNVVAGPY--EGLD--KEDL---PTQLCAFTGGVLRAEA 95 (405)
T ss_pred ehHHHHHHHHhhC-CCEEEEEecccCCCCCCccccCCCcEEEEecCCCc--ccCC--HHHH---HHHHHHHHHHHHHHHh
Confidence 4556677888885 999999997643221 1222257899999873221 1111 1111 11111111 1121222
Q ss_pred hh-cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccC-CCcHHHHHHHHHHHHHhccCCEEEEeC
Q 015058 97 VK-IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLG-RRSHFVSIYRWIEKYYGKMANGCLCVT 174 (414)
Q Consensus 97 ~k-~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~-~~~~~~~i~~~~Ek~~~k~ad~ii~vS 174 (414)
.+ ..+||+||+|.. ...+++.++++..++|+|+++|+... +....+. ...+.....+++|+.+.+.+|.++++|
T Consensus 96 ~~~~~~~Diih~h~~---~~~~~~~~~~~~~~~p~v~t~h~~~~-~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s 171 (405)
T TIGR03449 96 RHEPGYYDLIHSHYW---LSGQVGWLLRDRWGVPLVHTAHTLAA-VKNAALADGDTPEPEARRIGEQQLVDNADRLIANT 171 (405)
T ss_pred hccCCCCCeEEechH---HHHHHHHHHHHhcCCCEEEeccchHH-HHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECC
Confidence 22 258999999985 34556667777789999999998632 1110010 111222345567888889999999999
Q ss_pred HHHHHHHHHhhCCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccc
Q 015058 175 QAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGID 250 (414)
Q Consensus 175 ~~~~~~l~~~~gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (414)
+.+++.+.+.++.+ +.+|||| |.+.|.|.+ +...+.++
T Consensus 172 ~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~---~~~~~~~~----------------------------------- 213 (405)
T TIGR03449 172 DEEARDLVRHYDADPDRIDVVAPGADLERFRPGD---RATERARL----------------------------------- 213 (405)
T ss_pred HHHHHHHHHHcCCChhhEEEECCCcCHHHcCCCc---HHHHHHhc-----------------------------------
Confidence 99888888777754 7899999 777776653 22334332
Q ss_pred cccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCc--EEEEEEcC----
Q 015058 251 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR--LLFIITGK---- 324 (414)
Q Consensus 251 ~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--i~liI~G~---- 324 (414)
++++++ .+|+++||+.++||++.|++|++.+.++ .|+ ++|+|+|+
T Consensus 214 -~~~~~~-~~i~~~G~l~~~K~~~~li~a~~~l~~~---------------------------~~~~~~~l~ivG~~~~~ 264 (405)
T TIGR03449 214 -GLPLDT-KVVAFVGRIQPLKAPDVLLRAVAELLDR---------------------------DPDRNLRVIVVGGPSGS 264 (405)
T ss_pred -CCCCCC-cEEEEecCCCcccCHHHHHHHHHHHHhh---------------------------CCCcceEEEEEeCCCCC
Confidence 234444 4899999999999999999999988752 444 99999995
Q ss_pred C-CChHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 325 G-PDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 325 G-~~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
| +..++++++++++++. +|+|+| ++++++++.+|+.||++|+|+. .+++|.+++|||+||+|||+++++|.
T Consensus 265 g~~~~~~l~~~~~~~~l~~~v~~~g-~~~~~~~~~~l~~ad~~v~ps~---~E~~g~~~lEAma~G~Pvi~~~~~~~ 337 (405)
T TIGR03449 265 GLATPDALIELAAELGIADRVRFLP-PRPPEELVHVYRAADVVAVPSY---NESFGLVAMEAQACGTPVVAARVGGL 337 (405)
T ss_pred cchHHHHHHHHHHHcCCCceEEECC-CCCHHHHHHHHHhCCEEEECCC---CCCcChHHHHHHHcCCCEEEecCCCc
Confidence 5 5678899999999998 899997 9999999999999999998743 46789999999999999999998664
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-31 Score=277.01 Aligned_cols=286 Identities=18% Similarity=0.169 Sum_probs=196.0
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhh
Q 015058 18 SPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCV 97 (414)
Q Consensus 18 ~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~ 97 (414)
..++...++.|.++ ||+|+|+|.....+ . +..+++++.+..+..+. ....+..+....+ +++++
T Consensus 77 ~~~~~~l~~~L~~~-G~eV~vlt~~~~~~--~--~~~g~~v~~~~~~~~~~--~~~~~~~~~~~~~--------l~~~i- 140 (465)
T PLN02871 77 KNRFQNFIRYLREM-GDEVLVVTTDEGVP--Q--EFHGAKVIGSWSFPCPF--YQKVPLSLALSPR--------IISEV- 140 (465)
T ss_pred HHHHHHHHHHHHHC-CCeEEEEecCCCCC--c--cccCceeeccCCcCCcc--CCCceeeccCCHH--------HHHHH-
Confidence 34666777888885 99999999765431 1 23466665544211111 1111100000001 11112
Q ss_pred hcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHH
Q 015058 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (414)
Q Consensus 98 k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~ 177 (414)
+..+||+||+|++. ...+.+.++++..++|+|+++|+....... .. ..+.+.+...++++++++.+|.++++|+.+
T Consensus 141 ~~~kpDiIh~~~~~--~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~-~~-~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~ 216 (465)
T PLN02871 141 ARFKPDLIHASSPG--IMVFGALFYAKLLCVPLVMSYHTHVPVYIP-RY-TFSWLVKPMWDIIRFLHRAADLTLVTSPAL 216 (465)
T ss_pred HhCCCCEEEECCCc--hhHHHHHHHHHHhCCCEEEEEecCchhhhh-cc-cchhhHHHHHHHHHHHHhhCCEEEECCHHH
Confidence 23799999999862 223445556677899999999975321110 01 112222333456788999999999999999
Q ss_pred HHHHHHhhC---CcEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeecccccccc
Q 015058 178 QHELAQNWG---IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL 253 (414)
Q Consensus 178 ~~~l~~~~g---i~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 253 (414)
++.+.+... .++.++||| |.+.|.|... ..+.++++. +.
T Consensus 217 ~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~--~~~~~~~~~-----------------------------------~~ 259 (465)
T PLN02871 217 GKELEAAGVTAANRIRVWNKGVDSESFHPRFR--SEEMRARLS-----------------------------------GG 259 (465)
T ss_pred HHHHHHcCCCCcCeEEEeCCccCccccCCccc--cHHHHHHhc-----------------------------------CC
Confidence 999987632 238899999 8888887642 233443321 11
Q ss_pred CCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHH
Q 015058 254 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (414)
Q Consensus 254 ~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~ 333 (414)
.+++ .+|+|+||+.++||++.|++|++.+ |+++|+|+|+|++++++++
T Consensus 260 ~~~~-~~i~~vGrl~~~K~~~~li~a~~~~-------------------------------~~~~l~ivG~G~~~~~l~~ 307 (465)
T PLN02871 260 EPEK-PLIVYVGRLGAEKNLDFLKRVMERL-------------------------------PGARLAFVGDGPYREELEK 307 (465)
T ss_pred CCCC-eEEEEeCCCchhhhHHHHHHHHHhC-------------------------------CCcEEEEEeCChHHHHHHH
Confidence 2344 4899999999999999999987643 5799999999999999988
Q ss_pred HHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 334 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 334 ~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
++++. +|.|+| +++++|++.+|++||++|+++. .+++|++++||||||+|||+++++|.
T Consensus 308 ~~~~~---~V~f~G-~v~~~ev~~~~~~aDv~V~pS~---~E~~g~~vlEAmA~G~PVI~s~~gg~ 366 (465)
T PLN02871 308 MFAGT---PTVFTG-MLQGDELSQAYASGDVFVMPSE---SETLGFVVLEAMASGVPVVAARAGGI 366 (465)
T ss_pred HhccC---CeEEec-cCCHHHHHHHHHHCCEEEECCc---ccccCcHHHHHHHcCCCEEEcCCCCc
Confidence 87643 799997 9999999999999999998743 46789999999999999999987653
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-30 Score=260.79 Aligned_cols=313 Identities=17% Similarity=0.219 Sum_probs=204.7
Q ss_pred CEEEEEEeCCCCCChH-HHHHHHHHHhhCCCcEEEEecCCCCCCc-ccccCCCeEEEEeecCCCCCCCCCCchHHHHHHH
Q 015058 5 GRACVVVLGDLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHA-AILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLL 82 (414)
Q Consensus 5 ~~~~v~~~~d~~~~~r-~~~~a~~La~~~g~eV~vv~~~~~~~~~-~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~ 82 (414)
+++++.-..+.|+..+ +...|.+|+++ ||+|+|+|........ ......++.++..+.|.. .. ....+..+.
T Consensus 2 kIl~~~~~~~~gG~e~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~---~~~~~~~~~ 75 (392)
T cd03805 2 RVAFIHPDLGIGGAERLVVDAALALQSR-GHEVTIYTSHHDPSHCFEETKDGTLPVRVRGDWLP--RS---IFGRFHILC 75 (392)
T ss_pred eEEEECCCCCCchHHHHHHHHHHHHHhC-CCeEEEEcCCCCchhcchhccCCeeEEEEEeEEEc--ch---hhHhHHHHH
Confidence 3444443334454444 46778888886 9999999975432111 111233466666552211 10 111111111
Q ss_pred HHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcH----HHHHHHH
Q 015058 83 KPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSH----FVSIYRW 158 (414)
Q Consensus 83 k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~----~~~i~~~ 158 (414)
..+......++....+..++|+||+++.+ ... .+++...+.|+|+++|... .... .+.+. +....++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~---~~~--~~~~~~~~~~~i~~~h~~~-~~~~---~~~~~~~~~~~~~~~~ 146 (392)
T cd03805 76 AYLRMLYLALYLLLLPDEKYDVFIVDQVS---ACV--PLLKLFSPSKILFYCHFPD-QLLA---QRGSLLKRLYRKPFDW 146 (392)
T ss_pred HHHHHHHHHHHHHhcccCCCCEEEEcCcc---hHH--HHHHHhcCCcEEEEEecCh-HHhc---CCCcHHHHHHHHHHHH
Confidence 22222111111112344799999998752 221 1223333478998888432 2111 12222 2344678
Q ss_pred HHHHHhccCCEEEEeCHHHHHHHHHhhCC-c---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCC
Q 015058 159 IEKYYGKMANGCLCVTQAMQHELAQNWGI-K---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGM 233 (414)
Q Consensus 159 ~Ek~~~k~ad~ii~vS~~~~~~l~~~~gi-~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 233 (414)
+|++.++.||.++|+|+.+++.+.+.++. + +.+|||+ |.+.|.|..... .++.
T Consensus 147 ~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~~~---~~~~------------------- 204 (392)
T cd03805 147 LEEFTTGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDP---DPGL------------------- 204 (392)
T ss_pred HHHHHhhCceEEEEcChhHHHHHHHHhcccccCCcceeCCCcCHHHcCcccccc---cccc-------------------
Confidence 89999999999999999999999876643 2 3589999 777776653211 1101
Q ss_pred CCCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCC
Q 015058 234 EGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYL 313 (414)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (414)
....++. .+++++||+.+.||++.+++|++.+.++. ..
T Consensus 205 -----------------~~~~~~~-~~i~~~grl~~~Kg~~~ll~a~~~l~~~~------------------------~~ 242 (392)
T cd03805 205 -----------------LIPKSGK-KTFLSINRFERKKNIALAIEAFAILKDKL------------------------AE 242 (392)
T ss_pred -----------------cccCCCc-eEEEEEeeecccCChHHHHHHHHHHHhhc------------------------cc
Confidence 0122344 58999999999999999999999987630 00
Q ss_pred CCcEEEEEEcCCCCh--------HHHHHHHHH-cCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHH
Q 015058 314 YPRLLFIITGKGPDK--------ESYEEKIRR-LRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCY 383 (414)
Q Consensus 314 ~p~i~liI~G~G~~~--------e~l~~~i~~-l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~E 383 (414)
.|+++|+|+|+|+.+ +++++++++ ++++ +|.|+| +++.+++..+|+.||++++++ ..+++|++++|
T Consensus 243 ~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g-~~~~~~~~~~l~~ad~~l~~s---~~E~~g~~~lE 318 (392)
T cd03805 243 FKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLP-SISDSQKELLLSSARALLYTP---SNEHFGIVPLE 318 (392)
T ss_pred ccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeC-CCChHHHHHHHhhCeEEEECC---CcCCCCchHHH
Confidence 278999999999864 788999999 9998 999997 999999999999999999753 34778999999
Q ss_pred HHHcCCeEEEeeeCCcc
Q 015058 384 CWYSRYSLKLLWTCSVV 400 (414)
Q Consensus 384 ama~G~Pvi~s~~~~~~ 400 (414)
|||||+|||+++++|..
T Consensus 319 Ama~G~PvI~s~~~~~~ 335 (392)
T cd03805 319 AMYAGKPVIACNSGGPL 335 (392)
T ss_pred HHHcCCCEEEECCCCcH
Confidence 99999999999988753
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-29 Score=243.26 Aligned_cols=306 Identities=22% Similarity=0.286 Sum_probs=214.7
Q ss_pred CCChHHHHHHHHHHhhCCCcEEEEecCCCCCCccc------ccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHH
Q 015058 16 GRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAI------LEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFF 89 (414)
Q Consensus 16 ~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~------~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~ 89 (414)
|...++...+..|+++ ||+|++++.......... ....++++++++.... . ... .+..+...+....
T Consensus 15 G~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~---~~~~~~~~~~~~~ 87 (394)
T cd03794 15 GGAFRTTELAEELVKR-GHEVTVITGSPNYPSGKIYKGYKREEVDGVRVHRVPLPPY--K-KNG---LLKRLLNYLSFAL 87 (394)
T ss_pred CcceeHHHHHHHHHhC-CceEEEEecCCCcccccccccceEEecCCeEEEEEecCCC--C-ccc---hHHHHHhhhHHHH
Confidence 4556777888999996 999999997754432222 2357889988873221 1 111 1111122221111
Q ss_pred HHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhh-hhccCC-CcHHHHHHHHHHHHHhccC
Q 015058 90 MLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLL-SLSLGR-RSHFVSIYRWIEKYYGKMA 167 (414)
Q Consensus 90 ~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~-~~~~~~-~~~~~~i~~~~Ek~~~k~a 167 (414)
...+.+..+..+||+||+++++ ......+.++++..++|++++.|+...... ...... .....++.+++|++..+.+
T Consensus 88 ~~~~~~~~~~~~~D~v~~~~~~-~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (394)
T cd03794 88 SALLALLKRRRRPDVIIATSPP-LLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRA 166 (394)
T ss_pred HHHHHHHhcccCCCEEEEcCCh-HHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcC
Confidence 2222222235899999999842 233445556666678999999998632211 111111 2222367788899999999
Q ss_pred CEEEEeCHHHHHHHHHhhCCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCcccee
Q 015058 168 NGCLCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIF 243 (414)
Q Consensus 168 d~ii~vS~~~~~~l~~~~gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (414)
|.++++|+.+++.+. .++.+ +.++||+ +...+.+.... .. +.++
T Consensus 167 d~vi~~s~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~-~~~~---------------------------- 214 (394)
T cd03794 167 DAIVVISPGMREYLV-RRGVPPEKISVIPNGVDLELFKPPPAD--ES-LRKE---------------------------- 214 (394)
T ss_pred CEEEEECHHHHHHHH-hcCCCcCceEEcCCCCCHHHcCCccch--hh-hhhc----------------------------
Confidence 999999999999987 33443 8899999 55555444321 11 1111
Q ss_pred eeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEc
Q 015058 244 TSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG 323 (414)
Q Consensus 244 ~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G 323 (414)
... +.+..++++|++.++||++.+++|++.+.+ . ++++|+|+|
T Consensus 215 --------~~~-~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~---------------------------~-~~~~l~i~G 257 (394)
T cd03794 215 --------LGL-DDKFVVLYAGNIGRAQGLDTLLEAAALLKD---------------------------R-PDIRFLIVG 257 (394)
T ss_pred --------cCC-CCcEEEEEecCcccccCHHHHHHHHHHHhh---------------------------c-CCeEEEEeC
Confidence 112 234589999999999999999999998874 2 689999999
Q ss_pred CCCChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCC--CCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 324 KGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS--GLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 324 ~G~~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~--g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
+|+..+.+++.+...++.+|.|+| +++.+++..+|++||++++++.... +.++|+|++|||+||+|||+++.++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~v~~~g-~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~ 334 (394)
T cd03794 258 DGPEKEELKELAKALGLDNVTFLG-RVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGES 334 (394)
T ss_pred CcccHHHHHHHHHHcCCCcEEEeC-CCChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCc
Confidence 999999999988888888999998 9999999999999999998754432 56789999999999999999988874
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-29 Score=261.95 Aligned_cols=305 Identities=18% Similarity=0.061 Sum_probs=191.8
Q ss_pred HHHHHHHHHHhhCCC--cEEEEecCCCC-------CCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 015058 20 RMQYQALSLARQMSL--EVDVVAYGGSK-------PHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFM 90 (414)
Q Consensus 20 r~~~~a~~La~~~g~--eV~vv~~~~~~-------~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~ 90 (414)
.+...+..|+++ || +|+|+|..... ........+|+++++++. ....... ......++......
T Consensus 31 ~v~~La~~L~~~-G~~~~V~v~t~~~~~~~~~~~~~~~~~~~~~gv~v~r~~~--~~~~~~~-~~~~~~~~~~~~~~--- 103 (439)
T TIGR02472 31 YVLELARALARR-SEVEQVDLVTRLIKDAKVSPDYAQPIERIAPGARIVRLPF--GPRRYLR-KELLWPYLDELADN--- 103 (439)
T ss_pred HHHHHHHHHHhC-CCCcEEEEEeccccCcCCCCccCCCeeEeCCCcEEEEecC--CCCCCcC-hhhhhhhHHHHHHH---
Confidence 444556667774 87 99999964211 011112257999999983 2211111 00111111111111
Q ss_pred HHHHHhhhc-CCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhh-hcc-C-CCcHHHH---HHH--HHHH
Q 015058 91 LLWFLCVKI-ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLS-LSL-G-RRSHFVS---IYR--WIEK 161 (414)
Q Consensus 91 l~~~l~~k~-~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~-~~~-~-~~~~~~~---i~~--~~Ek 161 (414)
+. .++.+. .+|||||+|++ .+.+++.++++..++|+|+|.|+....... ... + ....+.+ +.. ..|+
T Consensus 104 l~-~~~~~~~~~~DvIH~h~~---~~~~~~~~~~~~~~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (439)
T TIGR02472 104 LL-QHLRQQGHLPDLIHAHYA---DAGYVGARLSRLLGVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEE 179 (439)
T ss_pred HH-HHHHHcCCCCCEEEEcch---hHHHHHHHHHHHhCCCEEEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHH
Confidence 11 122222 47999999986 456677777888899999999986432110 000 0 0011111 111 2478
Q ss_pred HHhccCCEEEEeCHHHHHH-HHHhhCC---cEEEecCC-CCCCcCCCChH-HHHHHHHHhhhhccCCCCccccccCCCCC
Q 015058 162 YYGKMANGCLCVTQAMQHE-LAQNWGI---KATVLYDQ-PPEFFHPTSLE-EKHELFCRLNKILHQPLGVQDCVSNGMEG 235 (414)
Q Consensus 162 ~~~k~ad~ii~vS~~~~~~-l~~~~gi---~i~vI~n~-~~~~f~p~~~~-~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 235 (414)
+.++.+|.|+|+|...... +....++ ++.+|||| |++.|.|.... +..++++.+..
T Consensus 180 ~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~------------------ 241 (439)
T TIGR02472 180 ETLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAP------------------ 241 (439)
T ss_pred HHHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHHHh------------------
Confidence 8889999999999765443 3332233 38899999 88888775321 11222222110
Q ss_pred CCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCC
Q 015058 236 QKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP 315 (414)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 315 (414)
.+..++++ +|+++||+.++||++.||+|++.+.+.- ..+
T Consensus 242 ---------------~~~~~~~~-~i~~vGrl~~~Kg~~~li~A~~~l~~~~-------------------------~~~ 280 (439)
T TIGR02472 242 ---------------FLKDPEKP-PILAISRPDRRKNIPSLVEAYGRSPKLQ-------------------------EMA 280 (439)
T ss_pred ---------------hccccCCc-EEEEEcCCcccCCHHHHHHHHHhChhhh-------------------------hhc
Confidence 11234454 8999999999999999999998753210 123
Q ss_pred cEEEEEEcCCCChHH-----------HHHHHHHcCCC-cEEEecCCCChhhHHHHHhhc----cEEEeeccCCCCCCCch
Q 015058 316 RLLFIITGKGPDKES-----------YEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSA----DLGVCLHTSSSGLDLPM 379 (414)
Q Consensus 316 ~i~liI~G~G~~~e~-----------l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~a----Dl~V~~~~s~~g~~lP~ 379 (414)
++. +|+|+|++++. ++++++++++. +|+|.| +++++|++.+|++| |+||+|+ ..|++|+
T Consensus 281 ~l~-li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g-~~~~~~~~~~~~~a~~~~Dv~v~pS---~~E~fg~ 355 (439)
T TIGR02472 281 NLV-LVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPK-HHRPDDVPELYRLAARSRGIFVNPA---LTEPFGL 355 (439)
T ss_pred cEE-EEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecC-CCCHHHHHHHHHHHhhcCCEEeccc---ccCCccc
Confidence 443 46899886432 44567888998 999997 88999999999987 8999764 3578999
Q ss_pred hHHHHHHcCCeEEEeeeCCc
Q 015058 380 KVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 380 kl~Eama~G~Pvi~s~~~~~ 399 (414)
+++||||||+|||+|+++|.
T Consensus 356 ~~lEAma~G~PvV~s~~gg~ 375 (439)
T TIGR02472 356 TLLEAAACGLPIVATDDGGP 375 (439)
T ss_pred HHHHHHHhCCCEEEeCCCCc
Confidence 99999999999999998764
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.4e-30 Score=249.16 Aligned_cols=279 Identities=12% Similarity=0.052 Sum_probs=194.4
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 015058 22 QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIAS 101 (414)
Q Consensus 22 ~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k~~~ 101 (414)
...+..|.++ ||+|+|+|........ .....++++++++ ..... . +......+. .+|+..++..+
T Consensus 22 ~~la~~L~~~-g~~v~v~~~~~~~~~~-~~~~~~i~~~~~~--~~~~~---~----~~~~~~~~~----~~~~~~~~~~~ 86 (363)
T cd04955 22 EELAPRLVAR-GHEVTVYCRSPYPKQK-ETEYNGVRLIHIP--APEIG---G----LGTIIYDIL----AILHALFVKRD 86 (363)
T ss_pred HHHHHHHHhc-CCCEEEEEccCCCCCc-ccccCCceEEEcC--CCCcc---c----hhhhHHHHH----HHHHHHhccCC
Confidence 3455667765 9999999987543221 3345789999887 22111 0 111111111 11222222356
Q ss_pred CcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHHHH
Q 015058 102 PDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181 (414)
Q Consensus 102 ~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~~l 181 (414)
+|++|...| ....++.++++ .+.|++++.|+..+.- .....+..++.++.|++..+.||.++|+|+.+++.+
T Consensus 87 ~~~i~~~~~---~~~~~~~~~~~-~~~~~v~~~h~~~~~~----~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 158 (363)
T cd04955 87 IDHVHALGP---AIAPFLPLLRL-KGKKVVVNMDGLEWKR----AKWGRPAKRYLKFGEKLAVKFADRLIADSPGIKEYL 158 (363)
T ss_pred eEEEEecCc---cHHHHHHHHHh-cCCCEEEEccCcceee----cccccchhHHHHHHHHHHHhhccEEEeCCHHHHHHH
Confidence 666666655 22333444433 4899999999875421 112333456778889999999999999999999999
Q ss_pred HHhhCCcEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeE
Q 015058 182 AQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPAL 260 (414)
Q Consensus 182 ~~~~gi~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 260 (414)
++.+|.+..+|||+ +...+.+. .+.++++ ++++ ++ .
T Consensus 159 ~~~~~~~~~~i~ngv~~~~~~~~-----~~~~~~~------------------------------------~~~~-~~-~ 195 (363)
T cd04955 159 KEKYGRDSTYIPYGADHVVSSEE-----DEILKKY------------------------------------GLEP-GR-Y 195 (363)
T ss_pred HHhcCCCCeeeCCCcChhhcchh-----hhhHHhc------------------------------------CCCC-Cc-E
Confidence 88888878899999 55444330 1222221 2222 23 5
Q ss_pred EEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHH-HcC
Q 015058 261 VVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIR-RLR 339 (414)
Q Consensus 261 i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~-~l~ 339 (414)
++++||+.++||++.|++|++.+. ++++|+|+|+|+..+.+++.++ +++
T Consensus 196 i~~~G~~~~~Kg~~~li~a~~~l~------------------------------~~~~l~ivG~~~~~~~~~~~~~~~~~ 245 (363)
T cd04955 196 YLLVGRIVPENNIDDLIEAFSKSN------------------------------SGKKLVIVGNADHNTPYGKLLKEKAA 245 (363)
T ss_pred EEEEecccccCCHHHHHHHHHhhc------------------------------cCceEEEEcCCCCcchHHHHHHHHhC
Confidence 779999999999999999998764 2689999999988777887777 677
Q ss_pred CC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 340 LK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 340 l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
+. +|+|+| +++.+++..+|++||++++++. ..+++|++++|||+||+|||++++++.
T Consensus 246 ~~~~V~~~g-~~~~~~~~~~~~~ad~~v~ps~--~~e~~~~~~~EAma~G~PvI~s~~~~~ 303 (363)
T cd04955 246 ADPRIIFVG-PIYDQELLELLRYAALFYLHGH--SVGGTNPSLLEAMAYGCPVLASDNPFN 303 (363)
T ss_pred CCCcEEEcc-ccChHHHHHHHHhCCEEEeCCc--cCCCCChHHHHHHHcCCCEEEecCCcc
Confidence 77 999997 9999999999999999997633 237899999999999999999988764
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-29 Score=260.90 Aligned_cols=215 Identities=15% Similarity=0.166 Sum_probs=164.9
Q ss_pred hcCCCcEEEEeCCCCchHHHHHHHHHh--hcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCH
Q 015058 98 KIASPDVFLVQNPPSVPTLVAVKWASS--LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQ 175 (414)
Q Consensus 98 k~~~~Dvvh~~~pp~~~~~~~~~la~~--~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~ 175 (414)
+..+||+||+|.. +....+.+++. ..+.|+++++|+.... ..... ..++...+..++.||.++++|+
T Consensus 115 ~~~~~diihaH~~---~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~-------~~~~~-~~~~~~~~~~~~~ad~vv~~S~ 183 (406)
T PRK15427 115 TPFVADVFIAHFG---PAGVTAAKLRELGVLRGKIATIFHGIDIS-------SREVL-NHYTPEYQQLFRRGDLMLPISD 183 (406)
T ss_pred ccCCCCEEEEcCC---hHHHHHHHHHHhCCCCCCeEEEEcccccc-------cchhh-hhhhHHHHHHHHhCCEEEECCH
Confidence 3468999999986 33444444444 2345678899986431 11111 1111223445589999999999
Q ss_pred HHHHHHHHhhCCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeecccccc
Q 015058 176 AMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDV 251 (414)
Q Consensus 176 ~~~~~l~~~~gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (414)
.+++.+.+. |.+ +.++||| |.+.|.+....
T Consensus 184 ~~~~~l~~~-g~~~~ki~vi~nGvd~~~f~~~~~~--------------------------------------------- 217 (406)
T PRK15427 184 LWAGRLQKM-GCPPEKIAVSRMGVDMTRFSPRPVK--------------------------------------------- 217 (406)
T ss_pred HHHHHHHHc-CCCHHHEEEcCCCCCHHHcCCCccc---------------------------------------------
Confidence 999999764 764 8899999 76666543210
Q ss_pred ccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHH
Q 015058 252 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 331 (414)
Q Consensus 252 ~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l 331 (414)
.++.++.|+++||+.++||++.|++|++.++++ .++++|.|+|+|+.++++
T Consensus 218 --~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~---------------------------~~~~~l~ivG~G~~~~~l 268 (406)
T PRK15427 218 --APATPLEIISVARLTEKKGLHVAIEACRQLKEQ---------------------------GVAFRYRILGIGPWERRL 268 (406)
T ss_pred --cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhh---------------------------CCCEEEEEEECchhHHHH
Confidence 012345799999999999999999999998763 578999999999999999
Q ss_pred HHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCC-C--CCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 332 EEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-S--GLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 332 ~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~-~--g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
++.++++|++ +|+|.| ++++++++.+|++||++|+|+... . .+|+|++++||||||+|||+|+++|.
T Consensus 269 ~~~~~~~~l~~~V~~~G-~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~ 339 (406)
T PRK15427 269 RTLIEQYQLEDVVEMPG-FKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGI 339 (406)
T ss_pred HHHHHHcCCCCeEEEeC-CCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCc
Confidence 9999999998 999997 999999999999999999875422 2 37899999999999999999998764
|
|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=247.94 Aligned_cols=276 Identities=17% Similarity=0.122 Sum_probs=191.9
Q ss_pred HHHHHHhhCCCcEEEEecCCCCC-CcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 015058 24 QALSLARQMSLEVDVVAYGGSKP-HAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASP 102 (414)
Q Consensus 24 ~a~~La~~~g~eV~vv~~~~~~~-~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k~~~~ 102 (414)
.+..|++ .||+|++++...... ........++.+++++ .. .......+.. +. .++ +..+|
T Consensus 21 l~~~L~~-~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~----~~-------~~~-~~~~~ 81 (358)
T cd03812 21 YYRNLDR-SKIQFDFLVTSKEEGDYDDEIEKLGGKIYYIP--AR----KKNPLKYFKK----LY-------KLI-KKNKY 81 (358)
T ss_pred HHHhcCc-cceEEEEEEeCCCCcchHHHHHHcCCeEEEec--CC----CccHHHHHHH----HH-------HHH-hcCCC
Confidence 4455555 499999999775431 2223345677777755 21 1111111111 11 111 34799
Q ss_pred cEEEEeCCCCchHHHHHHHHHhhcCCeE-EEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHHHH
Q 015058 103 DVFLVQNPPSVPTLVAVKWASSLRRSAF-IVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181 (414)
Q Consensus 103 Dvvh~~~pp~~~~~~~~~la~~~~~~~~-Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~~l 181 (414)
|+||+|+++ ...+++.+ .+..+.|. +++.|+..+.. ...... ...+++++.+.+.+|.++++|+...+.+
T Consensus 82 Dvv~~~~~~--~~~~~~~~-~~~~~~~~~v~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~~~i~~s~~~~~~~ 152 (358)
T cd03812 82 DIVHVHGSS--ASGFILLA-AKKAGVKVRIAHSHNTSDSH----DKKKKI--LKYKVLRKLINRLATDYLACSEEAGKWL 152 (358)
T ss_pred CEEEEeCcc--hhHHHHHH-HhhCCCCeEEEEeccccccc----cccchh--hHHHHHHHHHHhcCCEEEEcCHHHHHHH
Confidence 999999873 22333333 34456665 55788764311 001111 1115667888899999999999999988
Q ss_pred HHhh-CCcEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCe
Q 015058 182 AQNW-GIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPA 259 (414)
Q Consensus 182 ~~~~-gi~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 259 (414)
.+.. ..++.+|||+ |.+.|.+.+.. +.. ++++ +..+++ +
T Consensus 153 ~~~~~~~~~~vi~ngvd~~~~~~~~~~-~~~-~~~~------------------------------------~~~~~~-~ 193 (358)
T cd03812 153 FGKVKNKKFKVIPNGIDLEKFIFNEEI-RKK-RREL------------------------------------GILEDK-F 193 (358)
T ss_pred HhCCCcccEEEEeccCcHHHcCCCchh-hhH-HHHc------------------------------------CCCCCC-E
Confidence 7642 2348999999 76666554321 111 2121 123344 5
Q ss_pred EEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHHHcC
Q 015058 260 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLR 339 (414)
Q Consensus 260 ~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~l~ 339 (414)
.|+++||+.++||++.+++|+..+.+ .+|+++|+|+|+|+..+.+++.+++++
T Consensus 194 ~i~~vGr~~~~Kg~~~li~a~~~l~~---------------------------~~~~~~l~ivG~g~~~~~~~~~~~~~~ 246 (358)
T cd03812 194 VIGHVGRFSEQKNHEFLIEIFAELLK---------------------------KNPNAKLLLVGDGELEEEIKKKVKELG 246 (358)
T ss_pred EEEEEeccccccChHHHHHHHHHHHH---------------------------hCCCeEEEEEeCCchHHHHHHHHHhcC
Confidence 89999999999999999999999976 368899999999999999999999999
Q ss_pred CC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 340 LK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 340 l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
+. +|.|.| +.++++.+|+.||++|+|+. .+++|++++||||+|+|||+|+.+|.
T Consensus 247 ~~~~v~~~g---~~~~~~~~~~~adi~v~ps~---~E~~~~~~lEAma~G~PvI~s~~~~~ 301 (358)
T cd03812 247 LEDKVIFLG---VRNDVPELLQAMDVFLFPSL---YEGLPLVLIEAQASGLPCILSDTITK 301 (358)
T ss_pred CCCcEEEec---ccCCHHHHHHhcCEEEeccc---ccCCCHHHHHHHHhCCCEEEEcCCch
Confidence 98 999998 48899999999999998743 47899999999999999999998875
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-29 Score=247.99 Aligned_cols=295 Identities=16% Similarity=0.160 Sum_probs=200.7
Q ss_pred EEEEEEeCCCCCChHH-HHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHH
Q 015058 6 RACVVVLGDLGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKP 84 (414)
Q Consensus 6 ~~~v~~~~d~~~~~r~-~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~ 84 (414)
+++++...++|+.+++ ...++.|+++ ||+|+|+|..... ......+++.++.++....+. ....... ...
T Consensus 2 ki~~~~~p~~gG~~~~~~~la~~L~~~-G~~v~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~----~~~ 72 (371)
T cd04962 2 KIGIVCYPTYGGSGVVATELGKALARR-GHEVHFITSSRPF--RLDEYSPNIFFHEVEVPQYPL--FQYPPYD----LAL 72 (371)
T ss_pred ceeEEEEeCCCCccchHHHHHHHHHhc-CCceEEEecCCCc--chhhhccCeEEEEecccccch--hhcchhH----HHH
Confidence 3455556566655444 4567788886 9999999976421 112234566666554111111 0000000 111
Q ss_pred HHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhh---cCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHH
Q 015058 85 LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL---RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEK 161 (414)
Q Consensus 85 l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~---~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek 161 (414)
.. .++.+. +..+||+||+|++. +....+.++.+. .++|+|++.|+..... .+... .++++++
T Consensus 73 ~~----~l~~~i-~~~~~divh~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~----~~~~~----~~~~~~~ 137 (371)
T cd04962 73 AS----KIAEVA-KRYKLDLLHVHYAV--PHAVAAYLAREILGKKDLPVVTTLHGTDITL----VGQDP----SFQPATR 137 (371)
T ss_pred HH----HHHHHH-hcCCccEEeecccC--CccHHHHHHHHhcCcCCCcEEEEEcCCcccc----ccccc----cchHHHH
Confidence 11 112222 34799999999752 223333333332 3799999999864321 11111 2235567
Q ss_pred HHhccCCEEEEeCHHHHHHHHHhhCC--cEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCC
Q 015058 162 YYGKMANGCLCVTQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238 (414)
Q Consensus 162 ~~~k~ad~ii~vS~~~~~~l~~~~gi--~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 238 (414)
+..+.+|.++++|+.+++.+.+.++. ++.++||+ +...|.+... ...++++
T Consensus 138 ~~~~~~d~ii~~s~~~~~~~~~~~~~~~~i~vi~n~~~~~~~~~~~~---~~~~~~~----------------------- 191 (371)
T cd04962 138 FSIEKSDGVTAVSESLRQETYELFDITKEIEVIPNFVDEDRFRPKPD---EALKRRL----------------------- 191 (371)
T ss_pred HHHhhCCEEEEcCHHHHHHHHHhcCCcCCEEEecCCcCHhhcCCCch---HHHHHhc-----------------------
Confidence 78899999999999999998876543 38899999 6555655431 2223222
Q ss_pred ccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEE
Q 015058 239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL 318 (414)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~ 318 (414)
++.+++ .+++++||+.+.||++.+++|++.+.+ .++++
T Consensus 192 -------------~~~~~~-~~il~~g~l~~~K~~~~li~a~~~l~~----------------------------~~~~~ 229 (371)
T cd04962 192 -------------GAPEGE-KVLIHISNFRPVKRIDDVIRIFAKVRK----------------------------EVPAR 229 (371)
T ss_pred -------------CCCCCC-eEEEEecccccccCHHHHHHHHHHHHh----------------------------cCCce
Confidence 233444 489999999999999999999998875 23589
Q ss_pred EEEEcCCCChHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 319 FIITGKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 319 liI~G~G~~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
|+|+|+|++.+++++.++++++. +|+|.| +.++++.+|+.||++|+|+. .+++|++++|||+||+|||+++.+
T Consensus 230 l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g---~~~~~~~~~~~~d~~v~ps~---~E~~~~~~~EAma~g~PvI~s~~~ 303 (371)
T cd04962 230 LLLVGDGPERSPAERLARELGLQDDVLFLG---KQDHVEELLSIADLFLLPSE---KESFGLAALEAMACGVPVVASNAG 303 (371)
T ss_pred EEEEcCCcCHHHHHHHHHHcCCCceEEEec---CcccHHHHHHhcCEEEeCCC---cCCCccHHHHHHHcCCCEEEeCCC
Confidence 99999999999999999999998 899998 56789999999999998743 468999999999999999999886
Q ss_pred C
Q 015058 398 S 398 (414)
Q Consensus 398 ~ 398 (414)
|
T Consensus 304 ~ 304 (371)
T cd04962 304 G 304 (371)
T ss_pred C
Confidence 5
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-29 Score=243.78 Aligned_cols=274 Identities=17% Similarity=0.160 Sum_probs=192.3
Q ss_pred HHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcC
Q 015058 21 MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIA 100 (414)
Q Consensus 21 ~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k~~ 100 (414)
....+..|+++ ||+|++++.... .....+..+++++.++ .... .....+. .... ++..+ +..
T Consensus 16 ~~~l~~~L~~~-g~~v~v~~~~~~--~~~~~~~~~~~~~~~~--~~~~----~~~~~~~----~~~~----l~~~~-~~~ 77 (355)
T cd03819 16 TLELARALVER-GHRSLVASAGGR--LVAELEAEGSRHIKLP--FISK----NPLRILL----NVAR----LRRLI-REE 77 (355)
T ss_pred HHHHHHHHHHc-CCEEEEEcCCCc--hHHHHHhcCCeEEEcc--cccc----chhhhHH----HHHH----HHHHH-HHc
Confidence 33566777775 999999986543 2233345678877776 2211 1111111 1111 11112 237
Q ss_pred CCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHHH
Q 015058 101 SPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180 (414)
Q Consensus 101 ~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~~ 180 (414)
+||+||+|++ ...+.+.++.+..++|+|+++|+.... .. ..+.+.+.+|.++++|+.+++.
T Consensus 78 ~~dii~~~~~---~~~~~~~~~~~~~~~~~i~~~h~~~~~--------~~--------~~~~~~~~~~~vi~~s~~~~~~ 138 (355)
T cd03819 78 KVDIVHARSR---APAWSAYLAARRTRPPFVTTVHGFYSV--------NF--------RYNAIMARGDRVIAVSNFIADH 138 (355)
T ss_pred CCCEEEECCC---chhHHHHHHHHhcCCCEEEEeCCchhh--------HH--------HHHHHHHhcCEEEEeCHHHHHH
Confidence 9999999986 333455566677799999999987421 10 1234457899999999999999
Q ss_pred HHHhhCCc---EEEecCC-CCCCcCCCCh--HHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccC
Q 015058 181 LAQNWGIK---ATVLYDQ-PPEFFHPTSL--EEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (414)
Q Consensus 181 l~~~~gi~---i~vI~n~-~~~~f~p~~~--~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 254 (414)
+.+.++++ +.+|||+ |.+.|.+... .....+++++ +++
T Consensus 139 ~~~~~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~------------------------------------~~~ 182 (355)
T cd03819 139 IRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREW------------------------------------PLP 182 (355)
T ss_pred HHHhcCCChhhEEEecCCccccccCccccchHHHHHHHHHc------------------------------------CCC
Confidence 98777764 7899999 7676755431 1111133332 233
Q ss_pred CCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHH---
Q 015058 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY--- 331 (414)
Q Consensus 255 ~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l--- 331 (414)
++. .+++++||+++.||++.+++|+..+++ ..++++|+|+|+|+..+.+
T Consensus 183 ~~~-~~i~~~Gr~~~~Kg~~~li~~~~~l~~---------------------------~~~~~~l~ivG~~~~~~~~~~~ 234 (355)
T cd03819 183 KGK-PVILLPGRLTRWKGQEVFIEALARLKK---------------------------DDPDVHLLIVGDAQGRRFYYAE 234 (355)
T ss_pred CCc-eEEEEeeccccccCHHHHHHHHHHHHh---------------------------cCCCeEEEEEECCcccchHHHH
Confidence 344 589999999999999999999999875 2568999999999765444
Q ss_pred -HHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCcc
Q 015058 332 -EEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSVV 400 (414)
Q Consensus 332 -~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~~ 400 (414)
++.++++++. +|.|+| ..+|+..+|++||++++++ ...+++|++++||||||+|||+++++|..
T Consensus 235 ~~~~~~~~~~~~~v~~~g---~~~~~~~~l~~ad~~i~ps--~~~e~~~~~l~EA~a~G~PvI~~~~~~~~ 300 (355)
T cd03819 235 LLELIKRLGLQDRVTFVG---HCSDMPAAYALADIVVSAS--TEPEAFGRTAVEAQAMGRPVIASDHGGAR 300 (355)
T ss_pred HHHHHHHcCCcceEEEcC---CcccHHHHHHhCCEEEecC--CCCCCCchHHHHHHhcCCCEEEcCCCCcH
Confidence 5667888887 899998 4889999999999999764 23568999999999999999999987653
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-29 Score=245.45 Aligned_cols=218 Identities=20% Similarity=0.177 Sum_probs=169.9
Q ss_pred hcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHH
Q 015058 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (414)
Q Consensus 98 k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~ 177 (414)
+..+||+||+|.. .....+..+++..|+|+|+++|+....... ....... .+.+...++.+.+.+|.++++|+.+
T Consensus 79 ~~~~~dvvh~~~~---~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 79 RRHRPDLVHAHFG---FDGVYALPLARRLGVPLVVTFHGFDATTSL-ALLLRSR-WALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HhhCCCEEEeccC---chHHHHHHHHHHcCCCEEEEEeCccccccc-hhhcccc-hhHHHHHHHHHHHhcCEEEECCHHH
Confidence 4579999999976 334444455677899999999975422110 0111111 3445667788889999999999999
Q ss_pred HHHHHHhhCCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeecccccccc
Q 015058 178 QHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL 253 (414)
Q Consensus 178 ~~~l~~~~gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 253 (414)
++.+.+. |.+ +.+++|+ |.+.|.|...
T Consensus 154 ~~~~~~~-~~~~~~i~vi~~g~d~~~~~~~~~------------------------------------------------ 184 (367)
T cd05844 154 RDRLLAL-GFPPEKVHVHPIGVDTAKFTPATP------------------------------------------------ 184 (367)
T ss_pred HHHHHHc-CCCHHHeEEecCCCCHHhcCCCCC------------------------------------------------
Confidence 9998875 654 8899999 6555544310
Q ss_pred CCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHH
Q 015058 254 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (414)
Q Consensus 254 ~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~ 333 (414)
..+ +..++++|++.+.||++.+++|+..+.++ +++++|+|+|+|+..+++++
T Consensus 185 ~~~-~~~i~~~G~~~~~K~~~~li~a~~~l~~~---------------------------~~~~~l~ivG~g~~~~~~~~ 236 (367)
T cd05844 185 ARR-PPRILFVGRFVEKKGPLLLLEAFARLARR---------------------------VPEVRLVIIGDGPLLAALEA 236 (367)
T ss_pred CCC-CcEEEEEEeeccccChHHHHHHHHHHHHh---------------------------CCCeEEEEEeCchHHHHHHH
Confidence 012 24899999999999999999999998763 67899999999999999999
Q ss_pred HHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCC-C--CCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 334 KIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-S--GLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 334 ~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~-~--g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
.++++|+. +|+|.| +++.++++.+|++||++|+|+... . .+++|++++|||+||+|||+++.+|
T Consensus 237 ~~~~~~~~~~v~~~g-~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~ 304 (367)
T cd05844 237 LARALGLGGRVTFLG-AQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG 304 (367)
T ss_pred HHHHcCCCCeEEECC-CCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC
Confidence 99999987 999997 899999999999999999875322 1 3789999999999999999998865
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-28 Score=244.13 Aligned_cols=297 Identities=19% Similarity=0.136 Sum_probs=202.7
Q ss_pred HHHHHHHHHHhhCCCcEEEEecCCCCCCcc-cccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhh
Q 015058 20 RMQYQALSLARQMSLEVDVVAYGGSKPHAA-ILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVK 98 (414)
Q Consensus 20 r~~~~a~~La~~~g~eV~vv~~~~~~~~~~-~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k 98 (414)
.+...+..|+++ ||+|+|+|......... ....+++.+++++ ..+....++. ............ +...+.+
T Consensus 26 ~~~~l~~~L~~~-g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~ 97 (398)
T cd03800 26 YVLELARALARL-GHEVDIFTRRIDDALPPIVELAPGVRVVRVP--AGPAEYLPKE-ELWPYLDEFADD----LLRFLRR 97 (398)
T ss_pred hHHHHHHHHhcc-CceEEEEEecCCcccCCccccccceEEEecc--cccccCCChh-hcchhHHHHHHH----HHHHHHh
Confidence 456677888885 99999999764432221 2345789998887 2221111110 011111111111 1112222
Q ss_pred c-CCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCC-cHHHHHHHHHHHHHhccCCEEEEeCHH
Q 015058 99 I-ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRR-SHFVSIYRWIEKYYGKMANGCLCVTQA 176 (414)
Q Consensus 99 ~-~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~-~~~~~i~~~~Ek~~~k~ad~ii~vS~~ 176 (414)
. .+||+||+|.+ .+..++..+++..++|+|++.|+..... ....... ........+.|+..++.||.++|+|+.
T Consensus 98 ~~~~~Div~~~~~---~~~~~~~~~~~~~~~~~i~~~h~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~ 173 (398)
T cd03800 98 EGGRPDLIHAHYW---DSGLVALLLARRLGIPLVHTFHSLGAVK-RRHLGAADTYEPARRIEAEERLLRAADRVIASTPQ 173 (398)
T ss_pred cCCCccEEEEecC---ccchHHHHHHhhcCCceEEEeecccccC-CcccccccccchhhhhhHHHHHHhhCCEEEEcCHH
Confidence 1 29999999976 3445566667778999999999864210 0001001 111233346688889999999999999
Q ss_pred HHHHHHHhhCCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccc
Q 015058 177 MQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF 252 (414)
Q Consensus 177 ~~~~l~~~~gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (414)
+++.+.+.++.+ +.+|||+ |.+.|.+..... +.++.+ .
T Consensus 174 ~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~~--~~~~~~------------------------------------~ 215 (398)
T cd03800 174 EAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAE--ARRARL------------------------------------L 215 (398)
T ss_pred HHHHHHHHccccccccEEECCCCCccceecccchh--hHHHhh------------------------------------c
Confidence 999998876543 7899999 777776543211 112111 1
Q ss_pred cCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCCh----
Q 015058 253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK---- 328 (414)
Q Consensus 253 l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~---- 328 (414)
.++++ .+++++||+.+.||++.+++|+..+.++ .++++|+|+|+|+..
T Consensus 216 ~~~~~-~~i~~~gr~~~~k~~~~ll~a~~~l~~~---------------------------~~~~~l~i~G~~~~~~~~~ 267 (398)
T cd03800 216 RDPDK-PRILAVGRLDPRKGIDTLIRAYAELPEL---------------------------RERANLVIVGGPRDDILAM 267 (398)
T ss_pred cCCCC-cEEEEEcccccccCHHHHHHHHHHHHHh---------------------------CCCeEEEEEECCCCcchhh
Confidence 23344 4899999999999999999999998763 578999999998753
Q ss_pred --HHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 329 --ESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 329 --e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
+.+++.++++++. +|.|+| +++.+++..+|+.||++++|+. .+++|++++|||+||+|||+++.+|
T Consensus 268 ~~~~~~~~~~~~~~~~~v~~~g-~~~~~~~~~~~~~adi~l~ps~---~e~~~~~l~Ea~a~G~Pvi~s~~~~ 336 (398)
T cd03800 268 DEEELRELARELGVIDRVDFPG-RVSREDLPALYRAADVFVNPAL---YEPFGLTALEAMACGLPVVATAVGG 336 (398)
T ss_pred hhHHHHHHHHhcCCCceEEEec-cCCHHHHHHHHHhCCEEEeccc---ccccCcHHHHHHhcCCCEEECCCCC
Confidence 3457788889987 999997 9999999999999999998643 3678999999999999999998764
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-28 Score=245.97 Aligned_cols=282 Identities=17% Similarity=0.211 Sum_probs=193.6
Q ss_pred HHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcC
Q 015058 21 MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIA 100 (414)
Q Consensus 21 ~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k~~ 100 (414)
+...++.|.+ .++|+|+|..... ....++++++.+.|.. ... ....+..+.. -+.+..+..
T Consensus 22 v~~l~~~l~~--~~~v~v~~~~~~~-----~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~----~~~~~~~~~ 82 (388)
T TIGR02149 22 VEELTRELAR--LMDVDVRCFGDQR-----FDSEGLTVKGYRPWSE----LKE----ANKALGTFSV----DLAMANDPV 82 (388)
T ss_pred HHHHHHHHHH--hcCeeEEcCCCch-----hcCCCeEEEEecChhh----ccc----hhhhhhhhhH----HHHHhhCCC
Confidence 3344455544 2788998876432 2356788888763211 111 1111111111 111222335
Q ss_pred CCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHHH
Q 015058 101 SPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180 (414)
Q Consensus 101 ~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~~ 180 (414)
++|+||+|++ ...+++.+++++.++|+|+++|+.... ............++..|+|+...+.||.++|+|+.+++.
T Consensus 83 ~~divh~~~~---~~~~~~~~~~~~~~~p~v~~~h~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~ 158 (388)
T TIGR02149 83 DADVVHSHTW---YTFLAGHLAKKLYDKPLVVTAHSLEPL-RPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMRED 158 (388)
T ss_pred CCCeEeecch---hhhhHHHHHHHhcCCCEEEEeeccccc-ccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHH
Confidence 7999999986 344556677777899999999987321 000000001113456788999999999999999999999
Q ss_pred HHHhh-CCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCC
Q 015058 181 LAQNW-GIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (414)
Q Consensus 181 l~~~~-gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 255 (414)
+.+.+ +++ +.+|||+ |.+.|.|.. +...++++ ++++
T Consensus 159 ~~~~~~~~~~~~i~vi~ng~~~~~~~~~~---~~~~~~~~------------------------------------~~~~ 199 (388)
T TIGR02149 159 ILKYYPDLDPEKVHVIYNGIDTKEYKPDD---GNVVLDRY------------------------------------GIDR 199 (388)
T ss_pred HHHHcCCCCcceEEEecCCCChhhcCCCc---hHHHHHHh------------------------------------CCCC
Confidence 98876 443 7899999 777776643 23344443 2444
Q ss_pred CCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCCh----HHH
Q 015058 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK----ESY 331 (414)
Q Consensus 256 ~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~----e~l 331 (414)
+++ +++++||+.++||++.|++|++.+. ++++++|+|+|++. +++
T Consensus 200 ~~~-~i~~~Grl~~~Kg~~~li~a~~~l~------------------------------~~~~l~i~g~g~~~~~~~~~~ 248 (388)
T TIGR02149 200 SRP-YILFVGRITRQKGVPHLLDAVHYIP------------------------------KDVQVVLCAGAPDTPEVAEEV 248 (388)
T ss_pred Cce-EEEEEcccccccCHHHHHHHHHHHh------------------------------hcCcEEEEeCCCCcHHHHHHH
Confidence 554 8999999999999999999998874 25788999888764 445
Q ss_pred HHHHHHcCCC--cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 332 EEKIRRLRLK--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 332 ~~~i~~l~l~--~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
++.+++++.. +|.|.+++++.++++.+|++||++|+++ ..+++|..++|||+||+|||+++++|
T Consensus 249 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v~ps---~~e~~g~~~lEA~a~G~PvI~s~~~~ 314 (388)
T TIGR02149 249 RQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCPS---IYEPLGIVNLEAMACGTPVVASATGG 314 (388)
T ss_pred HHHHHHhccccCceEEecCCCCHHHHHHHHHhCCEEEeCC---ccCCCChHHHHHHHcCCCEEEeCCCC
Confidence 5556666663 6888877899999999999999999763 24678999999999999999999765
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-28 Score=236.46 Aligned_cols=274 Identities=16% Similarity=0.114 Sum_probs=193.3
Q ss_pred HHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 015058 23 YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASP 102 (414)
Q Consensus 23 ~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k~~~~ 102 (414)
..+.+|.++ ||+|++++........ .....++++++++. .... ....... ..+.. + ..+..+|
T Consensus 22 ~l~~~L~~~-g~~v~v~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~--~~~~~~~----~~~~~-----~--~~~~~~~ 84 (357)
T cd03795 22 DLAEGLAAR-GIEVAVLCASPEPKGR-DEERNGHRVIRAPS--LLNV--ASTPFSP----SFFKQ-----L--KKLAKKA 84 (357)
T ss_pred HHHHHHHhC-CCceEEEecCCCCcch-hhhccCceEEEeec--cccc--ccccccH----HHHHH-----H--HhcCCCC
Confidence 455677775 9999999987543222 22345667777762 2111 0011000 00000 0 0134799
Q ss_pred cEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHHHHH
Q 015058 103 DVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELA 182 (414)
Q Consensus 103 Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~~l~ 182 (414)
|+||+|.+... .....+.. ..+.|.++++|+... ....+..++.++++++.+.||.++++|+.+++.+.
T Consensus 85 Dii~~~~~~~~--~~~~~~~~-~~~~~~i~~~h~~~~--------~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~ 153 (357)
T cd03795 85 DVIHLHFPNPL--ADLALLLL-PRKKPVVVHWHSDIV--------KQKLLLKLYRPLQRRFLRRADAIVATSPNYAETSP 153 (357)
T ss_pred CEEEEecCcch--HHHHHHHh-ccCceEEEEEcChhh--------ccchhhhhhhHHHHHHHHhcCEEEeCcHHHHHHHH
Confidence 99999987422 22222222 257899999998543 12234566778889999999999999999999877
Q ss_pred HhhCC--cEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCe
Q 015058 183 QNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPA 259 (414)
Q Consensus 183 ~~~gi--~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 259 (414)
..+.. ++.++||+ +.+.|.+.... +. . ++ ....+. +
T Consensus 154 ~~~~~~~~~~~i~~gi~~~~~~~~~~~-~~--~-~~------------------------------------~~~~~~-~ 192 (357)
T cd03795 154 VLRRFRDKVRVIPLGLDPARYPRPDAL-EE--A-IW------------------------------------RRAAGR-P 192 (357)
T ss_pred HhcCCccceEEecCCCChhhcCCcchh-hh--H-hh------------------------------------cCCCCC-c
Confidence 65443 48899999 66666554311 11 0 10 112233 5
Q ss_pred EEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHHHcC
Q 015058 260 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLR 339 (414)
Q Consensus 260 ~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~l~ 339 (414)
.++++||+.+.||++.+++|++.+. +++|+|+|+|+..+.+++.+++++
T Consensus 193 ~i~~~G~~~~~K~~~~li~a~~~l~-------------------------------~~~l~i~G~g~~~~~~~~~~~~~~ 241 (357)
T cd03795 193 FFLFVGRLVYYKGLDVLLEAAAALP-------------------------------DAPLVIVGEGPLEAELEALAAALG 241 (357)
T ss_pred EEEEecccccccCHHHHHHHHHhcc-------------------------------CcEEEEEeCChhHHHHHHHHHhcC
Confidence 8999999999999999999998762 599999999999999999999999
Q ss_pred CC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 340 LK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 340 l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
+. +|+|.| +++++++..+|++||++++|+.+ ..+++|++++|||+||+|||+++.++
T Consensus 242 ~~~~V~~~g-~v~~~~~~~~~~~ad~~i~ps~~-~~e~~g~~~~Ea~~~g~Pvi~~~~~~ 299 (357)
T cd03795 242 LLDRVRFLG-RLDDEEKAALLAACDVFVFPSVE-RSEAFGIVLLEAMAFGKPVISTEIGT 299 (357)
T ss_pred CcceEEEcC-CCCHHHHHHHHHhCCEEEeCCcc-cccccchHHHHHHHcCCCEEecCCCC
Confidence 88 999997 99999999999999999987532 35789999999999999999998664
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-28 Score=254.33 Aligned_cols=225 Identities=17% Similarity=0.149 Sum_probs=161.2
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhh-----cCCeEEEEEcCcchhh-h---hhc-cCCC-cHH--HHH--H--HHHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSL-----RRSAFIVDWHNFGYTL-L---SLS-LGRR-SHF--VSI--Y--RWIEKY 162 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~-----~~~~~Iv~~H~~~~~l-~---~~~-~~~~-~~~--~~i--~--~~~Ek~ 162 (414)
.+|||||+|.+ ++++++.+++.. .++|+|+|.|+..+.- . .+. .+.. ..+ ..+ + ..+.+.
T Consensus 117 ~~pDiiH~h~w---~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (466)
T PRK00654 117 PRPDIVHAHDW---HTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKA 193 (466)
T ss_pred CCCceEEECCc---HHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHH
Confidence 59999999997 666666666643 3799999999985410 0 000 0000 000 000 0 122355
Q ss_pred HhccCCEEEEeCHHHHHHHHHh-hC-----------CcEEEecCC-CCCCcCCCCh----------------HHHHHHHH
Q 015058 163 YGKMANGCLCVTQAMQHELAQN-WG-----------IKATVLYDQ-PPEFFHPTSL----------------EEKHELFC 213 (414)
Q Consensus 163 ~~k~ad~ii~vS~~~~~~l~~~-~g-----------i~i~vI~n~-~~~~f~p~~~----------------~~~~~l~~ 213 (414)
..+.||.|+|+|+.+++++.+. +| .++.+|+|| |.+.|.|... +.+.++++
T Consensus 194 ~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~ 273 (466)
T PRK00654 194 GLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQE 273 (466)
T ss_pred HHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHHHHH
Confidence 6789999999999999988642 21 248899999 8888887531 11233444
Q ss_pred HhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCC-CCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhc
Q 015058 214 RLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILN 292 (414)
Q Consensus 214 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~ 292 (414)
++ ++++ +.| +|+++||+.++||++.|++|++.+.+
T Consensus 274 ~~------------------------------------gl~~~~~~-~i~~vGRl~~~KG~~~li~a~~~l~~------- 309 (466)
T PRK00654 274 RF------------------------------------GLPDDDAP-LFAMVSRLTEQKGLDLVLEALPELLE------- 309 (466)
T ss_pred Hh------------------------------------CCCCCCCc-EEEEeeccccccChHHHHHHHHHHHh-------
Confidence 43 3443 444 89999999999999999999998864
Q ss_pred cCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCC--hHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeecc
Q 015058 293 EDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHT 370 (414)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~--~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~ 370 (414)
.+++|+|+|+|+. ++++++++++++. +|.+.+++ +.++++.+|++||++|+|+
T Consensus 310 ----------------------~~~~lvivG~g~~~~~~~l~~l~~~~~~-~v~~~~g~-~~~~~~~~~~~aDv~v~PS- 364 (466)
T PRK00654 310 ----------------------QGGQLVLLGTGDPELEEAFRALAARYPG-KVGVQIGY-DEALAHRIYAGADMFLMPS- 364 (466)
T ss_pred ----------------------cCCEEEEEecCcHHHHHHHHHHHHHCCC-cEEEEEeC-CHHHHHHHHhhCCEEEeCC-
Confidence 2689999999963 5788999988875 46654435 6667889999999999873
Q ss_pred CCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 371 SSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 371 s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
..|++|+.++|||+||+|+|+++++|
T Consensus 365 --~~E~~gl~~lEAma~G~p~V~~~~gG 390 (466)
T PRK00654 365 --RFEPCGLTQLYALRYGTLPIVRRTGG 390 (466)
T ss_pred --CCCCchHHHHHHHHCCCCEEEeCCCC
Confidence 35789999999999999999998876
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-28 Score=264.57 Aligned_cols=228 Identities=18% Similarity=0.160 Sum_probs=168.2
Q ss_pred hcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEE-EEcCcchhhhhhccCCCcHHHHHHHHHHHH-HhccCCEEEEeCH
Q 015058 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV-DWHNFGYTLLSLSLGRRSHFVSIYRWIEKY-YGKMANGCLCVTQ 175 (414)
Q Consensus 98 k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv-~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~-~~k~ad~ii~vS~ 175 (414)
+..+|||||+|++ .+.+++.+++++.++|+|+ ++|+++.. . ....+...++.+-+. ....++.+++.|+
T Consensus 397 k~~kpDIVH~h~~---~a~~lg~lAa~~~gvPvIv~t~h~~~~~-----~-~~~~~~~~~~~l~~~l~~~~~~i~Vs~S~ 467 (694)
T PRK15179 397 RSSVPSVVHIWQD---GSIFACALAALLAGVPRIVLSVRTMPPV-----D-RPDRYRVEYDIIYSELLKMRGVALSSNSQ 467 (694)
T ss_pred HHcCCcEEEEeCC---cHHHHHHHHHHHcCCCEEEEEeCCCccc-----c-chhHHHHHHHHHHHHHHhcCCeEEEeCcH
Confidence 3479999999987 5566777888888999876 56775321 1 111111122222122 2224567788888
Q ss_pred HHHHHHHHhhCCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeecccccc
Q 015058 176 AMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDV 251 (414)
Q Consensus 176 ~~~~~l~~~~gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (414)
..++.+.+.++++ +.||||| |++.|.|.... + ..+.++. .
T Consensus 468 ~~~~~l~~~~g~~~~kI~VI~NGVd~~~f~~~~~~-~-~~~~~~~----------------------------------~ 511 (694)
T PRK15179 468 FAAHRYADWLGVDERRIPVVYNGLAPLKSVQDDAC-T-AMMAQFD----------------------------------A 511 (694)
T ss_pred HHHHHHHHHcCCChhHEEEECCCcCHHhcCCCchh-h-HHHHhhc----------------------------------c
Confidence 8888887777775 8999999 77777654321 1 1111111 0
Q ss_pred ccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHH
Q 015058 252 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 331 (414)
Q Consensus 252 ~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l 331 (414)
..+.+. ++|+++||+.+.||++.||+|+..+.++ .|+++|+|+|+|++++++
T Consensus 512 ~~~~~~-~vIg~VGRL~~~KG~~~LI~A~a~l~~~---------------------------~p~~~LvIvG~G~~~~~L 563 (694)
T PRK15179 512 RTSDAR-FTVGTVMRVDDNKRPFLWVEAAQRFAAS---------------------------HPKVRFIMVGGGPLLESV 563 (694)
T ss_pred ccCCCC-eEEEEEEeCCccCCHHHHHHHHHHHHHH---------------------------CcCeEEEEEccCcchHHH
Confidence 122233 4899999999999999999999988763 688999999999999999
Q ss_pred HHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc--------ccc
Q 015058 332 EEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV--------VGC 402 (414)
Q Consensus 332 ~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~--------~~~ 402 (414)
+++++++|++ +|+|+| + .+|++.+|++||++|+++ ..+++|++++|||+||+|||+|+++|. +|.
T Consensus 564 ~~l~~~lgL~~~V~flG-~--~~dv~~ll~aaDv~VlpS---~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~Gl 637 (694)
T PRK15179 564 REFAQRLGMGERILFTG-L--SRRVGYWLTQFNAFLLLS---RFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGL 637 (694)
T ss_pred HHHHHHcCCCCcEEEcC-C--cchHHHHHHhcCEEEecc---ccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEE
Confidence 9999999998 999998 4 578999999999999763 357899999999999999999998763 577
Q ss_pred hh
Q 015058 403 LF 404 (414)
Q Consensus 403 ~~ 404 (414)
++
T Consensus 638 Lv 639 (694)
T PRK15179 638 TL 639 (694)
T ss_pred Ee
Confidence 66
|
|
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-28 Score=230.22 Aligned_cols=294 Identities=18% Similarity=0.147 Sum_probs=207.0
Q ss_pred EEEEEEeCCCCCChHH-HHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHH
Q 015058 6 RACVVVLGDLGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKP 84 (414)
Q Consensus 6 ~~~v~~~~d~~~~~r~-~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~ 84 (414)
.+.++...+.|+..++ ...++.|.++ |++|++++..............+++++.++ .... . ........+.+.
T Consensus 2 i~~i~~~~~~gG~~~~~~~l~~~l~~~-~~~v~~~~~~~~~~~~~~~~~~~i~v~~~~--~~~~--~-~~~~~~~~~~~~ 75 (365)
T cd03807 2 VLHVITGLDVGGAERMLVRLLKGLDRD-RFEHVVISLTDRGELGEELEEAGVPVYCLG--KRPG--R-PDPGALLRLYKL 75 (365)
T ss_pred eEEEEeeccCccHHHHHHHHHHHhhhc-cceEEEEecCcchhhhHHHHhcCCeEEEEe--cccc--c-ccHHHHHHHHHH
Confidence 3455555555544443 3556677665 999999997654433333345688888887 2211 0 111111111111
Q ss_pred HHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhh-cCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHH
Q 015058 85 LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY 163 (414)
Q Consensus 85 l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~-~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~ 163 (414)
+ +..+||+||++.+. ....+.++.+. .+.|++.+.|+..... .........++++.+
T Consensus 76 -----------~-~~~~~div~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~~~~~~~~~~~~~~~ 133 (365)
T cd03807 76 -----------I-RRLRPDVVHTWMYH---ADLYGGLAARLAGVPPVIWGIRHSDLDL-------GKKSTRLVARLRRLL 133 (365)
T ss_pred -----------H-HhhCCCEEEecccc---ccHHHHHHHHhcCCCcEEEEecCCcccc-------cchhHhHHHHHHHHh
Confidence 1 23799999999762 23333344444 6788999999975421 123344566778888
Q ss_pred hccCCEEEEeCHHHHHHHHHhhCCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCc
Q 015058 164 GKMANGCLCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKAD 239 (414)
Q Consensus 164 ~k~ad~ii~vS~~~~~~l~~~~gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 239 (414)
.+.+|.++++|+.+++.+.+. +.+ +.++||+ +...|.+... .+...++++
T Consensus 134 ~~~~~~~i~~s~~~~~~~~~~-~~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~------------------------ 187 (365)
T cd03807 134 SSFIPLIVANSAAAAEYHQAI-GYPPKKIVVIPNGVDTERFSPDLD-ARARLREEL------------------------ 187 (365)
T ss_pred ccccCeEEeccHHHHHHHHHc-CCChhheeEeCCCcCHHhcCCccc-chHHHHHhc------------------------
Confidence 899999999999999988764 553 7889999 6666655432 222333332
Q ss_pred cceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEE
Q 015058 240 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF 319 (414)
Q Consensus 240 ~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~l 319 (414)
+++++. .+++++|++.+.||++.+++|+..+.++ .++++|
T Consensus 188 ------------~~~~~~-~~i~~~G~~~~~K~~~~li~a~~~l~~~---------------------------~~~~~l 227 (365)
T cd03807 188 ------------GLPEDT-FLIGIVARLHPQKDHATLLRAAALLLKK---------------------------FPNARL 227 (365)
T ss_pred ------------CCCCCC-eEEEEecccchhcCHHHHHHHHHHHHHh---------------------------CCCeEE
Confidence 344444 5899999999999999999999998762 578999
Q ss_pred EEEcCCCChHHHHHHHH-HcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 320 IITGKGPDKESYEEKIR-RLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 320 iI~G~G~~~e~l~~~i~-~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
+|+|+|+..+.+++..+ ++++. +|.|.| +.+|++.+|+.||++++|+. .+++|++++|||+||+|||+++.+
T Consensus 228 ~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g---~~~~~~~~~~~adi~v~ps~---~e~~~~~~~Ea~a~g~PvI~~~~~ 301 (365)
T cd03807 228 LLVGDGPDRANLELLALKELGLEDKVILLG---ERSDVPALLNALDVFVLSSL---SEGFPNVLLEAMACGLPVVATDVG 301 (365)
T ss_pred EEecCCcchhHHHHHHHHhcCCCceEEEcc---ccccHHHHHHhCCEEEeCCc---cccCCcHHHHHHhcCCCEEEcCCC
Confidence 99999999888888887 88888 999998 67899999999999998743 368999999999999999999877
Q ss_pred Cc
Q 015058 398 SV 399 (414)
Q Consensus 398 ~~ 399 (414)
+.
T Consensus 302 ~~ 303 (365)
T cd03807 302 DN 303 (365)
T ss_pred Ch
Confidence 64
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.2e-28 Score=231.93 Aligned_cols=293 Identities=16% Similarity=0.175 Sum_probs=200.2
Q ss_pred CChHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHh
Q 015058 17 RSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLC 96 (414)
Q Consensus 17 ~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~ 96 (414)
.+.++...++.|+++ ||+|++++.......... ....+...... .. . ..+. .....+...+.. .
T Consensus 16 ~~~~~~~l~~~L~~~-g~~v~v~~~~~~~~~~~~-~~~~~~~~~~~--~~--~-~~~~--------~~~~~~~~~~~~-~ 79 (374)
T cd03817 16 VATSIRRLAEELEKR-GHEVYVVAPSYPGAPEEE-EVVVVRPFRVP--TF--K-YPDF--------RLPLPIPRALII-I 79 (374)
T ss_pred eehHHHHHHHHHHHc-CCeEEEEeCCCCCCCccc-ccccccccccc--cc--h-hhhh--------hccccHHHHHHH-H
Confidence 345677788888886 999999997654321111 11111111111 00 0 0000 000011111111 1
Q ss_pred hhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHH-HHHHHHhccCCEEEEeCH
Q 015058 97 VKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYR-WIEKYYGKMANGCLCVTQ 175 (414)
Q Consensus 97 ~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~-~~Ek~~~k~ad~ii~vS~ 175 (414)
.+..+||+||++++. .....+..+++..++|+|.++|+..................... ++++++.+.||.++|+|+
T Consensus 80 ~~~~~~Div~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~ 157 (374)
T cd03817 80 LKELGPDIVHTHTPF--SLGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSE 157 (374)
T ss_pred HhhcCCCEEEECCch--hhhhHHHHHHHHcCCCEEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccH
Confidence 234799999999872 33345556667789999999998743211100111122222333 678889999999999999
Q ss_pred HHHHHHHHhhCCc--EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccc
Q 015058 176 AMQHELAQNWGIK--ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF 252 (414)
Q Consensus 176 ~~~~~l~~~~gi~--i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (414)
.+++.+.+. +.+ +.++||+ +.+.|.+.... ..++++ +
T Consensus 158 ~~~~~~~~~-~~~~~~~vi~~~~~~~~~~~~~~~---~~~~~~------------------------------------~ 197 (374)
T cd03817 158 KIADLLREY-GVKRPIEVIPTGIDLDRFEPVDGD---DERRKL------------------------------------G 197 (374)
T ss_pred HHHHHHHhc-CCCCceEEcCCccchhccCccchh---HHHHhc------------------------------------C
Confidence 999988764 554 7899999 76667655321 122221 2
Q ss_pred cCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHH
Q 015058 253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (414)
Q Consensus 253 l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~ 332 (414)
+.++ ++.++++|++.+.||++.+++|++.+.++ .++++|+++|+|+..++++
T Consensus 198 ~~~~-~~~i~~~G~~~~~k~~~~l~~~~~~~~~~---------------------------~~~~~l~i~G~~~~~~~~~ 249 (374)
T cd03817 198 IPED-EPVLLYVGRLAKEKNIDFLIRAFARLLKE---------------------------EPDVKLVIVGDGPEREELE 249 (374)
T ss_pred CCCC-CeEEEEEeeeecccCHHHHHHHHHHHHHh---------------------------CCCeEEEEEeCCchHHHHH
Confidence 2333 35899999999999999999999998762 4789999999999999999
Q ss_pred HHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 333 EKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 333 ~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
+.++++++. +|.|+| +++.++++.+|+.||++++++. .+++|.+++|||+||+|||+++.++.
T Consensus 250 ~~~~~~~~~~~v~~~g-~~~~~~~~~~~~~ad~~l~~s~---~e~~~~~~~Ea~~~g~PvI~~~~~~~ 313 (374)
T cd03817 250 ELARELGLADRVIFTG-FVPREELPDYYKAADLFVFAST---TETQGLVLLEAMAAGLPVVAVDAPGL 313 (374)
T ss_pred HHHHHcCCCCcEEEec-cCChHHHHHHHHHcCEEEeccc---ccCcChHHHHHHHcCCcEEEeCCCCh
Confidence 999999998 999997 9999999999999999997643 35689999999999999999998764
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-27 Score=233.95 Aligned_cols=215 Identities=15% Similarity=0.136 Sum_probs=167.0
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhh-cCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~-~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~ 177 (414)
..+||+||+|.+ ....++.++++. .+.|++++.|+... .. +...+..++..+.++.++++|+..
T Consensus 77 ~~~pdiv~~~~~---~~~~~~~l~~~~~~~~~~v~~~h~~~~---------~~---~~~~~~~~~~~~~~~~~~~~s~~~ 141 (360)
T cd04951 77 QFKPDVVHAHMF---HANIFARLLRLFLPSPPLICTAHSKNE---------GG---RLRMLAYRLTDFLSDLTTNVSKEA 141 (360)
T ss_pred hcCCCEEEEccc---chHHHHHHHHhhCCCCcEEEEeeccCc---------hh---HHHHHHHHHHhhccCceEEEcHHH
Confidence 379999999986 333444444443 46788999998642 11 122344566667889999999999
Q ss_pred HHHHHHhhCCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeecccccccc
Q 015058 178 QHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL 253 (414)
Q Consensus 178 ~~~l~~~~gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 253 (414)
++.+.+..+++ +.++||+ +...|.+... .+...++++ ++
T Consensus 142 ~~~~~~~~~~~~~~~~~i~ng~~~~~~~~~~~-~~~~~~~~~------------------------------------~~ 184 (360)
T cd04951 142 LDYFIASKAFNANKSFVVYNGIDTDRFRKDPA-RRLKIRNAL------------------------------------GV 184 (360)
T ss_pred HHHHHhccCCCcccEEEEccccchhhcCcchH-HHHHHHHHc------------------------------------Cc
Confidence 99998774443 8899999 6666765432 233344332 34
Q ss_pred CCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHH
Q 015058 254 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (414)
Q Consensus 254 ~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~ 333 (414)
++++ .+++++|++.+.||++.+++|+..+.+ ..|+++|+|+|+|+.++++++
T Consensus 185 ~~~~-~~~l~~g~~~~~kg~~~li~a~~~l~~---------------------------~~~~~~l~i~G~g~~~~~~~~ 236 (360)
T cd04951 185 KNDT-FVILAVGRLVEAKDYPNLLKAFAKLLS---------------------------DYLDIKLLIAGDGPLRATLER 236 (360)
T ss_pred CCCC-EEEEEEeeCchhcCcHHHHHHHHHHHh---------------------------hCCCeEEEEEcCCCcHHHHHH
Confidence 4455 489999999999999999999998875 357899999999999999999
Q ss_pred HHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 334 KIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 334 ~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
.++++++. +|.|.| +.++++.+|+.||++++++. .+++|.+++|||++|+|||+++.++.
T Consensus 237 ~~~~~~~~~~v~~~g---~~~~~~~~~~~ad~~v~~s~---~e~~~~~~~Ea~a~G~PvI~~~~~~~ 297 (360)
T cd04951 237 LIKALGLSNRVKLLG---LRDDIAAYYNAADLFVLSSA---WEGFGLVVAEAMACELPVVATDAGGV 297 (360)
T ss_pred HHHhcCCCCcEEEec---ccccHHHHHHhhceEEeccc---ccCCChHHHHHHHcCCCEEEecCCCh
Confidence 99999998 899998 67899999999999997643 46899999999999999999998765
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-27 Score=264.98 Aligned_cols=322 Identities=16% Similarity=0.088 Sum_probs=207.7
Q ss_pred HHHHHHHhhCC--CcEEEEecCCCCCC-------c--------------ccccCCCeEEEEeecCCCCC-CCCCCchHHH
Q 015058 23 YQALSLARQMS--LEVDVVAYGGSKPH-------A--------------AILEHPSIHIHTMTQWPTIP-RGLPKVLKPV 78 (414)
Q Consensus 23 ~~a~~La~~~g--~eV~vv~~~~~~~~-------~--------------~~~~~~~i~i~~v~~~~~~~-~~~~~~~~~~ 78 (414)
..|.+|++. | |+|+|+|.....+. + .....+|+.|+++| ..+. +..++-
T Consensus 203 ELAraLa~~-~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~~~~~~~~~~~~g~rIvRip--~GP~~~~l~Ke---- 275 (1050)
T TIGR02468 203 ELARALGSM-PGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSSENDGDEMGESSGAYIIRIP--FGPRDKYIPKE---- 275 (1050)
T ss_pred HHHHHHHhC-CCCCEEEEEeCCcCccccccccCCccccccccccccccccccCCCCeEEEEec--cCCCCCCcCHH----
Confidence 456777774 8 89999998754321 0 11123699999998 3332 112221
Q ss_pred HHHHHHHHHHHHHHH-HHhh------------hcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhh--
Q 015058 79 LLLLKPLIQFFMLLW-FLCV------------KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLS-- 143 (414)
Q Consensus 79 ~~l~k~l~~~~~l~~-~l~~------------k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~-- 143 (414)
.++..+..|..-+. ++.. ....||+||+|+. .++.++..+++..++|+|+|.|..+-.-..
T Consensus 276 -~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw---~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~l 351 (1050)
T TIGR02468 276 -ELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYA---DAGDSAALLSGALNVPMVLTGHSLGRDKLEQL 351 (1050)
T ss_pred -HHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcc---hHHHHHHHHHHhhCCCEEEECccchhhhhhhh
Confidence 12223333222111 1110 0124999999987 677788888998999999999987422110
Q ss_pred hccCC---CcH--HHHHH--HHHHHHHhccCCEEEEeCHHHHHHHHHhhC----------------------C---cEEE
Q 015058 144 LSLGR---RSH--FVSIY--RWIEKYYGKMANGCLCVTQAMQHELAQNWG----------------------I---KATV 191 (414)
Q Consensus 144 ~~~~~---~~~--~~~i~--~~~Ek~~~k~ad~ii~vS~~~~~~l~~~~g----------------------i---~i~v 191 (414)
+..+. ... .+++. ...|+.....||.|||.|+.+++++...|+ . ++.|
T Consensus 352 l~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~V 431 (1050)
T TIGR02468 352 LKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAV 431 (1050)
T ss_pred cccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEE
Confidence 00111 000 01111 235889999999999999999998666553 1 4789
Q ss_pred ecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeEEEEeccCCCC
Q 015058 192 LYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPD 270 (414)
Q Consensus 192 I~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~ 270 (414)
|||| |++.|.|.+.+...+ .++.. + .+...+..+. ..... ...++++| +|+++||+.++
T Consensus 432 IPpGVD~~~F~P~~~~~~~~---~~~~~--------~------~~~~~~~~~~-~~l~r-~~~~pdkp-vIL~VGRL~p~ 491 (1050)
T TIGR02468 432 IPPGMEFSHIVPHDGDMDGE---TEGNE--------E------HPAKPDPPIW-SEIMR-FFTNPRKP-MILALARPDPK 491 (1050)
T ss_pred eCCCCcHHHccCCCccccch---hcccc--------c------ccccccchhh-HHHHh-hcccCCCc-EEEEEcCCccc
Confidence 9999 889999864321100 00000 0 0000000000 00000 11345665 89999999999
Q ss_pred CChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCCh-----------HHHHHHHHHcC
Q 015058 271 EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-----------ESYEEKIRRLR 339 (414)
Q Consensus 271 Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~-----------e~l~~~i~~l~ 339 (414)
||++.||+|+..+++. ...+++. +|+|+|++. +++++++++++
T Consensus 492 KGi~~LIeAf~~L~~l-------------------------~~~~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~li~~lg 545 (1050)
T TIGR02468 492 KNITTLVKAFGECRPL-------------------------RELANLT-LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYD 545 (1050)
T ss_pred cCHHHHHHHHHHhHhh-------------------------ccCCCEE-EEEecCchhhhhhccchHHHHHHHHHHHHhC
Confidence 9999999999998642 0235666 467887643 45778999999
Q ss_pred CC-cEEEecCCCChhhHHHHHhhc----cEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC--------cccchhh
Q 015058 340 LK-RVAFRTMWLSAEDYPLLLGSA----DLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS--------VVGCLFV 405 (414)
Q Consensus 340 l~-~V~f~g~~v~~ed~~~~l~~a----Dl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~--------~~~~~~~ 405 (414)
+. +|+|.| ++++++++.+|+.| |+||+|+ ..|+||++++||||||+|||+|+++| ++|++|.
T Consensus 546 L~g~V~FlG-~v~~edvp~lYr~Ad~s~DVFV~PS---~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVd 620 (1050)
T TIGR02468 546 LYGQVAYPK-HHKQSDVPDIYRLAAKTKGVFINPA---FIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVD 620 (1050)
T ss_pred CCCeEEecC-CCCHHHHHHHHHHhhhcCCeeeCCc---ccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEEC
Confidence 98 999997 99999999999988 6999763 35889999999999999999999876 4677764
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-27 Score=240.15 Aligned_cols=300 Identities=15% Similarity=0.088 Sum_probs=189.3
Q ss_pred hHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhh
Q 015058 19 PRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVK 98 (414)
Q Consensus 19 ~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k 98 (414)
+.....|..|+++ ||+|+++|..+..... . ++++++++......++.......+...+......+...+.+..+
T Consensus 11 ~~~~~la~~L~~~-G~~v~~~~~~~~~~~~----~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (396)
T cd03818 11 GQFRHLAPALAAQ-GHEVVFLTEPNAAPPP----G-GVRVVRYRPPRGPTSGTHPYLREFEEAVLRGQAVARALLALRAK 84 (396)
T ss_pred hhHHHHHHHHHHC-CCEEEEEecCCCCCCC----C-CeeEEEecCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhc
Confidence 4456689999997 9999999987643111 1 79999988332211111111111111111111222222222233
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHh-hcCCeEEEEEcCcchhh-hhhccC---CCcH--HH--HHHHHHHHHHhccCCE
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTL-LSLSLG---RRSH--FV--SIYRWIEKYYGKMANG 169 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~-~~~~~~Iv~~H~~~~~l-~~~~~~---~~~~--~~--~i~~~~Ek~~~k~ad~ 169 (414)
..+||+||+|.-. . .+.+++. +.++|+|...|.+.... ....+. ..+. .. +...++.....+.||.
T Consensus 85 ~~~pdvi~~h~~~--~---~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 159 (396)
T cd03818 85 GFRPDVIVAHPGW--G---ETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADA 159 (396)
T ss_pred CCCCCEEEECCcc--c---hhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCE
Confidence 4689999999641 1 2223333 35688887554221000 000011 1111 01 1112224456789999
Q ss_pred EEEeCHHHHHHHHHhhCCcEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccc
Q 015058 170 CLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAG 248 (414)
Q Consensus 170 ii~vS~~~~~~l~~~~gi~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (414)
+||+|+.+++.+.+.++-++.+|||| |.+.|.|.... ....+.
T Consensus 160 vi~~s~~~~~~~~~~~~~ki~vI~ngvd~~~f~~~~~~-~~~~~~----------------------------------- 203 (396)
T cd03818 160 GVSPTRWQRSTFPAELRSRISVIHDGIDTDRLRPDPQA-RLRLPN----------------------------------- 203 (396)
T ss_pred EECCCHHHHhhCcHhhccceEEeCCCccccccCCCchh-hhcccc-----------------------------------
Confidence 99999999998877666669999999 88888876421 111110
Q ss_pred cccccCCCCCeEEEEecc-CCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCC
Q 015058 249 IDVFLKPNRPALVVSSTS-WTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD 327 (414)
Q Consensus 249 ~~~~l~~~~~~~i~~vgr-l~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~ 327 (414)
...+.++++ +|+|+|| +.+.||++.|++|+..+.++ .|+++|+|+|+|..
T Consensus 204 -~~~~~~~~~-~i~~vgR~l~~~Kg~~~ll~a~~~l~~~---------------------------~~~~~lvivG~~~~ 254 (396)
T cd03818 204 -GRVLTPGDE-VITFVARNLEPYRGFHVFMRALPRLLRA---------------------------RPDARVVIVGGDGV 254 (396)
T ss_pred -cccCCCCCe-EEEEECCCcccccCHHHHHHHHHHHHHH---------------------------CCCcEEEEEcCCCc
Confidence 011334443 8999997 99999999999999988763 68999999997421
Q ss_pred --------hH-HHHHHHHHcC----CCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe
Q 015058 328 --------KE-SYEEKIRRLR----LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL 394 (414)
Q Consensus 328 --------~e-~l~~~i~~l~----l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s 394 (414)
.+ ..++.+++++ ..+|+|+| +++.++++.+|++||++|+++. .+++|++++||||||+|||+|
T Consensus 255 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G-~v~~~~~~~~l~~adv~v~~s~---~e~~~~~llEAmA~G~PVIas 330 (396)
T cd03818 255 SYGAPPPDGESWKQHMLDELGGRLDLSRVHFLG-RVPYDQYLALLQVSDVHVYLTY---PFVLSWSLLEAMACGCLVVGS 330 (396)
T ss_pred ccCCCCCCcccHHHHHHHHhhcccCcceEEEeC-CCCHHHHHHHHHhCcEEEEcCc---ccccchHHHHHHHCCCCEEEc
Confidence 11 2333444444 35999997 9999999999999999997643 467899999999999999999
Q ss_pred eeCC
Q 015058 395 WTCS 398 (414)
Q Consensus 395 ~~~~ 398 (414)
+++|
T Consensus 331 ~~~g 334 (396)
T cd03818 331 DTAP 334 (396)
T ss_pred CCCC
Confidence 9876
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-27 Score=228.81 Aligned_cols=276 Identities=17% Similarity=0.099 Sum_probs=193.8
Q ss_pred CChHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHh
Q 015058 17 RSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLC 96 (414)
Q Consensus 17 ~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~ 96 (414)
....+..++.+|.++ ||+|+|++.......... .. ..... . .. ......+..+.....+ +..+
T Consensus 13 ~~~~~~~~~~~L~~~-g~~v~v~~~~~~~~~~~~---~~--~~~~~---~------~~-~~~~~~~~~~~~~~~~-~~~~ 75 (355)
T cd03799 13 SETFILREILALEAA-GHEVEIFSLRPPEDTLVH---PE--DRAEL---A------RT-RYLARSLALLAQALVL-AREL 75 (355)
T ss_pred chHHHHHHHHHHHhC-CCeEEEEEecCccccccc---cc--ccccc---c------ch-HHHHHHHHHHHHHHHH-HHHH
Confidence 456788899999996 999999997654211110 00 00000 0 00 0001111111111111 1111
Q ss_pred hhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHH
Q 015058 97 VKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQA 176 (414)
Q Consensus 97 ~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~ 176 (414)
+..+||+||+|.+. ....++.+.++..++|++++.|+.... ..... +.++...+.+|.++|+|+.
T Consensus 76 -~~~~~Dii~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~------~~~~~~~~~~~~vi~~s~~ 140 (355)
T cd03799 76 -RRLGIDHIHAHFGT--TPATVAMLASRLGGIPYSFTAHGKDIF------RSPDA------IDLDEKLARADFVVAISEY 140 (355)
T ss_pred -HhcCCCEEEECCCC--chHHHHHHHHHhcCCCEEEEEeccccc------ccCch------HHHHHHHhhCCEEEECCHH
Confidence 34799999999863 334455566666789999999976421 11111 4556677899999999999
Q ss_pred HHHHHHHhhCCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccc
Q 015058 177 MQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF 252 (414)
Q Consensus 177 ~~~~l~~~~gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (414)
+++.+.+.++.+ +.++||+ |.+.|.+.. . .
T Consensus 141 ~~~~l~~~~~~~~~~~~vi~~~~d~~~~~~~~-------~-~-------------------------------------- 174 (355)
T cd03799 141 NRQQLIRLLGCDPDKIHVVHCGVDLERFPPRP-------P-P-------------------------------------- 174 (355)
T ss_pred HHHHHHHhcCCCcccEEEEeCCcCHHHcCCcc-------c-c--------------------------------------
Confidence 999998864443 8899999 555453331 0 0
Q ss_pred cCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHH
Q 015058 253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (414)
Q Consensus 253 l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~ 332 (414)
.. +.++.|+++|++.+.||++.+++|++.+.+ ..++++|+|+|+|+..+.++
T Consensus 175 ~~-~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~---------------------------~~~~~~l~i~G~~~~~~~~~ 226 (355)
T cd03799 175 PP-GEPLRILSVGRLVEKKGLDYLLEALALLKD---------------------------RGIDFRLDIVGDGPLRDELE 226 (355)
T ss_pred cc-CCCeEEEEEeeeccccCHHHHHHHHHHHhh---------------------------cCCCeEEEEEECCccHHHHH
Confidence 01 223588999999999999999999998875 25789999999999999999
Q ss_pred HHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCC-C--CCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 333 EKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-S--GLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 333 ~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~-~--g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
+.++++++. +|+|.| +++.+++..+|++||++++++... . .+++|++++|||+||+|||++++++.
T Consensus 227 ~~~~~~~~~~~v~~~g-~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~ 296 (355)
T cd03799 227 ALIAELGLEDRVTLLG-AKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGI 296 (355)
T ss_pred HHHHHcCCCCeEEECC-cCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCc
Confidence 999999998 999997 999999999999999999864321 1 17899999999999999999998764
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-27 Score=223.64 Aligned_cols=287 Identities=18% Similarity=0.184 Sum_probs=198.0
Q ss_pred EEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHH
Q 015058 9 VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQF 88 (414)
Q Consensus 9 v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~ 88 (414)
++....-|....+...++.|.++ ||+|++++....... .....+++++.++ ..... . .....+ ..+.++
T Consensus 4 ~i~~~~~g~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~-~-~~~~~~----~~~~~~ 72 (359)
T cd03808 4 HIVTVDGGLYSFRLPLIKALRAA-GYEVHVVAPPGDELE--ELEALGVKVIPIP--LDRRG-I-NPFKDL----KALLRL 72 (359)
T ss_pred EEEecchhHHHHHHHHHHHHHhc-CCeeEEEecCCCccc--ccccCCceEEecc--ccccc-c-ChHhHH----HHHHHH
Confidence 33333333445566778888785 999999997764422 3446788888887 22100 1 111111 111111
Q ss_pred HHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHh-hcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccC
Q 015058 89 FMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMA 167 (414)
Q Consensus 89 ~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~-~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~a 167 (414)
. +. .+..+||+||++.. ....++.++++ ..+.+++.++|+..+.. ........++.+++++..+.+
T Consensus 73 ---~-~~-~~~~~~dvv~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 139 (359)
T cd03808 73 ---Y-RL-LRKERPDIVHTHTP---KPGILGRLAARLAGVPKVIYTVHGLGFVF-----TSGGLKRRLYLLLERLALRFT 139 (359)
T ss_pred ---H-HH-HHhcCCCEEEEccc---cchhHHHHHHHHcCCCCEEEEecCcchhh-----ccchhHHHHHHHHHHHHHhhc
Confidence 1 11 13479999999975 22334445555 45566777888875421 122224567788899999999
Q ss_pred CEEEEeCHHHHHHHHHhhCC---c-EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccce
Q 015058 168 NGCLCVTQAMQHELAQNWGI---K-ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETI 242 (414)
Q Consensus 168 d~ii~vS~~~~~~l~~~~gi---~-i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (414)
|.++++|+.+++.+.+.... + +.+++++ +.+.+.+....
T Consensus 140 d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------ 183 (359)
T cd03808 140 DKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPEP------------------------------------ 183 (359)
T ss_pred cEEEEcCHHHHHHHHHhcCCCcCceEEecCCCCChhhcCccccc------------------------------------
Confidence 99999999999999887543 2 4555666 44444332100
Q ss_pred eeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEE
Q 015058 243 FTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT 322 (414)
Q Consensus 243 ~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~ 322 (414)
.+++ +..++++|++.+.||++.+++|++.+.+ .+++++|+|+
T Consensus 184 ----------~~~~-~~~i~~~G~~~~~k~~~~li~~~~~l~~---------------------------~~~~~~l~i~ 225 (359)
T cd03808 184 ----------IPED-DPVFLFVARLLKDKGIDELLEAARILKA---------------------------KGPNVRLLLV 225 (359)
T ss_pred ----------cCCC-CcEEEEEeccccccCHHHHHHHHHHHHh---------------------------cCCCeEEEEE
Confidence 0123 3589999999999999999999999875 3678999999
Q ss_pred cCCCChHHHHHH-HHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 323 GKGPDKESYEEK-IRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 323 G~G~~~e~l~~~-i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
|.|+..+..+.. +++++.. +|.|.| ..+++..+|++||++++++. .+++|++++|||+||+|||+++.++.
T Consensus 226 G~~~~~~~~~~~~~~~~~~~~~v~~~g---~~~~~~~~~~~adi~i~ps~---~e~~~~~~~Ea~~~G~Pvi~s~~~~~ 298 (359)
T cd03808 226 GDGDEENPAAILEIEKLGLEGRVEFLG---FRDDVPELLAAADVFVLPSY---REGLPRVLLEAMAMGRPVIATDVPGC 298 (359)
T ss_pred cCCCcchhhHHHHHHhcCCcceEEEee---ccccHHHHHHhccEEEecCc---ccCcchHHHHHHHcCCCEEEecCCCc
Confidence 999987766654 7777777 999998 48899999999999997643 37899999999999999999988743
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-27 Score=246.74 Aligned_cols=225 Identities=19% Similarity=0.115 Sum_probs=163.4
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhhcC---CeEEEEEcCcchhh-hh---hc-cCCC-cHH-HHH-----HHHHHHHHh
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSLRR---SAFIVDWHNFGYTL-LS---LS-LGRR-SHF-VSI-----YRWIEKYYG 164 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~~~---~~~Iv~~H~~~~~l-~~---~~-~~~~-~~~-~~i-----~~~~Ek~~~ 164 (414)
.+|||||+|++ ++++++.+++...+ +|+|+|+|++.+.- .. +. .+.. ..+ ..- ...+++...
T Consensus 127 ~~~DiiH~hdw---~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 203 (473)
T TIGR02095 127 WQPDVVHAHDW---HTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGI 203 (473)
T ss_pred CCCCEEEECCc---HHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHH
Confidence 68999999997 66676766666554 89999999975310 00 00 0000 000 000 012345667
Q ss_pred ccCCEEEEeCHHHHHHHHHh-hC-----------CcEEEecCC-CCCCcCCCCh----------------HHHHHHHHHh
Q 015058 165 KMANGCLCVTQAMQHELAQN-WG-----------IKATVLYDQ-PPEFFHPTSL----------------EEKHELFCRL 215 (414)
Q Consensus 165 k~ad~ii~vS~~~~~~l~~~-~g-----------i~i~vI~n~-~~~~f~p~~~----------------~~~~~l~~~l 215 (414)
+.||.++++|+.+++++.+. +| .++.+|+|| |.+.|.|... ..+..+++++
T Consensus 204 ~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~ 283 (473)
T TIGR02095 204 VYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEEL 283 (473)
T ss_pred HhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHc
Confidence 89999999999999888642 11 248899999 8888887531 1123344443
Q ss_pred hhhccCCCCccccccCCCCCCCCccceeeeccccccccCC--CCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhcc
Q 015058 216 NKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP--NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE 293 (414)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~ 293 (414)
++++ +++ +|+++||++++||++.|++|+..+.+
T Consensus 284 ------------------------------------gl~~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~-------- 318 (473)
T TIGR02095 284 ------------------------------------GLPVDDDVP-LFGVISRLTQQKGVDLLLAALPELLE-------- 318 (473)
T ss_pred ------------------------------------CCCccCCCC-EEEEEecCccccChHHHHHHHHHHHH--------
Confidence 3433 454 89999999999999999999999874
Q ss_pred CCCchhhhhhhhhcCCccCCCCcEEEEEEcCCC--ChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccC
Q 015058 294 DDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTS 371 (414)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~--~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s 371 (414)
.+++|+|+|+|+ .++++++++++++ .+|.|.+ ..+.++++.+|++||++++|+
T Consensus 319 ---------------------~~~~lvi~G~g~~~~~~~l~~~~~~~~-~~v~~~~-~~~~~~~~~~~~~aDv~l~pS-- 373 (473)
T TIGR02095 319 ---------------------LGGQLVVLGTGDPELEEALRELAERYP-GNVRVII-GYDEALAHLIYAGADFILMPS-- 373 (473)
T ss_pred ---------------------cCcEEEEECCCCHHHHHHHHHHHHHCC-CcEEEEE-cCCHHHHHHHHHhCCEEEeCC--
Confidence 249999999995 4567888877655 4788886 558888999999999999863
Q ss_pred CCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 372 SSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 372 ~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
..|++|.+++|||+||+|+|+++++|
T Consensus 374 -~~E~~gl~~lEAma~G~pvI~s~~gg 399 (473)
T TIGR02095 374 -RFEPCGLTQLYAMRYGTVPIVRRTGG 399 (473)
T ss_pred -CcCCcHHHHHHHHHCCCCeEEccCCC
Confidence 35789999999999999999999887
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-27 Score=237.78 Aligned_cols=279 Identities=11% Similarity=0.073 Sum_probs=192.2
Q ss_pred CChHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCC-CC-CCCchHHHHHHHHHHHHHHHHHHH
Q 015058 17 RSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIP-RG-LPKVLKPVLLLLKPLIQFFMLLWF 94 (414)
Q Consensus 17 ~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~-~~-~~~~~~~~~~l~k~l~~~~~l~~~ 94 (414)
..++++.+...++++..++|+++|....+........+|+.+|+++ .... .. ..+. ..+ ....+.. .+ +.
T Consensus 19 ~~g~ve~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~-~~~~~~~---~~-~~ 90 (380)
T PRK15484 19 GAAAVETWIYQVAKRTSIPNRIACIKNPGYPEYTKVNDNCDIHYIG--FSRIYKRLFQKW-TRL-DPLPYSQ---RI-LN 90 (380)
T ss_pred cccHHHHHHHHhhhhccCCeeEEEecCCCCCchhhccCCCceEEEE--eccccchhhhhh-hcc-CchhHHH---HH-HH
Confidence 4678999999988776779999998764412222456778888886 2111 00 0110 000 0011111 11 11
Q ss_pred Hh--hhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEE
Q 015058 95 LC--VKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLC 172 (414)
Q Consensus 95 l~--~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~ 172 (414)
.+ .+..++|+||+|+. +. ....+..+..+.|+++++|+... .. ..+.++.+++
T Consensus 91 ~~~~~~~~~~~vi~v~~~---~~-~~~~~~~~~~~~~~v~~~h~~~~---------~~------------~~~~~~~ii~ 145 (380)
T PRK15484 91 IAHKFTITKDSVIVIHNS---MK-LYRQIRERAPQAKLVMHMHNAFE---------PE------------LLDKNAKIIV 145 (380)
T ss_pred HHHhcCCCCCcEEEEeCc---HH-hHHHHHhhCCCCCEEEEEecccC---------hh------------HhccCCEEEE
Confidence 12 12357999999997 22 23445556678899999998621 10 1136799999
Q ss_pred eCHHHHHHHHHhhCC-cEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccc
Q 015058 173 VTQAMQHELAQNWGI-KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGID 250 (414)
Q Consensus 173 vS~~~~~~l~~~~gi-~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (414)
+|+.+++.+.+.+.. ++.+|||| |.+.|.+... .+.++++
T Consensus 146 ~S~~~~~~~~~~~~~~~i~vIpngvd~~~~~~~~~---~~~~~~~----------------------------------- 187 (380)
T PRK15484 146 PSQFLKKFYEERLPNADISIVPNGFCLETYQSNPQ---PNLRQQL----------------------------------- 187 (380)
T ss_pred cCHHHHHHHHhhCCCCCEEEecCCCCHHHcCCcch---HHHHHHh-----------------------------------
Confidence 999999988875433 38999999 7777766532 2334343
Q ss_pred cccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCC---
Q 015058 251 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--- 327 (414)
Q Consensus 251 ~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~--- 327 (414)
+++++. .+|+|+||+.+.||++.|++|++.+.+ .+|+++|+|+|+|+.
T Consensus 188 -~~~~~~-~~il~~Grl~~~Kg~~~Li~A~~~l~~---------------------------~~p~~~lvivG~g~~~~~ 238 (380)
T PRK15484 188 -NISPDE-TVLLYAGRISPDKGILLLMQAFEKLAT---------------------------AHSNLKLVVVGDPTASSK 238 (380)
T ss_pred -CCCCCC-eEEEEeccCccccCHHHHHHHHHHHHH---------------------------hCCCeEEEEEeCCccccc
Confidence 233344 489999999999999999999999876 378999999999874
Q ss_pred --hH----HHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 328 --KE----SYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 328 --~e----~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
++ ++++++++++ .+|.|+| +++.++++.+|++||++|+|+ ...+++|++++||||||+|||+++.+|.
T Consensus 239 ~~~~~~~~~l~~~~~~l~-~~v~~~G-~~~~~~l~~~~~~aDv~v~pS--~~~E~f~~~~lEAma~G~PVI~s~~gg~ 312 (380)
T PRK15484 239 GEKAAYQKKVLEAAKRIG-DRCIMLG-GQPPEKMHNYYPLADLVVVPS--QVEEAFCMVAVEAMAAGKPVLASTKGGI 312 (380)
T ss_pred cchhHHHHHHHHHHHhcC-CcEEEeC-CCCHHHHHHHHHhCCEEEeCC--CCccccccHHHHHHHcCCCEEEeCCCCc
Confidence 23 3444555554 2799997 899999999999999999763 2247899999999999999999998764
|
|
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-27 Score=227.05 Aligned_cols=283 Identities=19% Similarity=0.211 Sum_probs=190.9
Q ss_pred CChHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHh
Q 015058 17 RSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLC 96 (414)
Q Consensus 17 ~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~ 96 (414)
...++.+.++.|+++ ||+|++++.......... ...+.+...+ ... .......+. ....+.. .+
T Consensus 16 ~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~--~~~~~~~~~~---~~~--~~~~~~~~~-~~~~~~~-------~~ 79 (364)
T cd03814 16 VVRTLQRLVEHLRAR-GHEVLVIAPGPFRESEGP--ARVVPVPSVP---LPG--YPEIRLALP-PRRRVRR-------LL 79 (364)
T ss_pred eehHHHHHHHHHHHC-CCEEEEEeCCchhhccCC--CCceeecccc---cCc--ccceEeccc-chhhHHH-------HH
Confidence 345677778888886 999999998754322111 1222332222 100 000000000 0111111 11
Q ss_pred hhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHH
Q 015058 97 VKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQA 176 (414)
Q Consensus 97 ~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~ 176 (414)
+..+||+||++++. ...+++..+++..++|++.++|+...... ............+.+++++++.+|.++++|+.
T Consensus 80 -~~~~pdii~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~ 154 (364)
T cd03814 80 -DAFAPDVVHIATPG--PLGLAALRAARRLGIPVVTSYHTDFPEYL--RYYGLGPLSWLAWAYLRWFHNRADRVLVPSPS 154 (364)
T ss_pred -HhcCCCEEEEeccc--hhhHHHHHHHHHcCCCEEEEEecChHHHh--hhcccchHhHhhHHHHHHHHHhCCEEEeCCHH
Confidence 34799999999763 22344556667789999999998632211 11122333444467788889999999999999
Q ss_pred HHHHHHHhhCCc-EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccC
Q 015058 177 MQHELAQNWGIK-ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (414)
Q Consensus 177 ~~~~l~~~~gi~-i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 254 (414)
+++.+.+. +.+ +.+++|+ +.+.|.|.... ...+.++ + .
T Consensus 155 ~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~------------------------------------~-~ 194 (364)
T cd03814 155 LADELRAR-GFRRVRLWPRGVDTELFHPRRRD--EALRARL------------------------------------G-P 194 (364)
T ss_pred HHHHHhcc-CCCceeecCCCccccccCccccc--HHHHHHh------------------------------------C-C
Confidence 99866554 444 8889999 77777665321 1222221 1 1
Q ss_pred CCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHH
Q 015058 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK 334 (414)
Q Consensus 255 ~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~ 334 (414)
++ +..++++|++.+.||++.+++|++.+.+ + ++++|+|+|+|++.+.++
T Consensus 195 ~~-~~~i~~~G~~~~~k~~~~~i~~~~~l~~---------------------------~-~~~~l~i~G~~~~~~~~~-- 243 (364)
T cd03814 195 PD-RPVLLYVGRLAPEKNLEALLDADLPLRR---------------------------R-PPVRLVIVGDGPARARLE-- 243 (364)
T ss_pred CC-CeEEEEEeccccccCHHHHHHHHHHhhh---------------------------c-CCceEEEEeCCchHHHHh--
Confidence 23 3589999999999999999999999875 3 689999999999877665
Q ss_pred HHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 335 IRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 335 i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
+.. +|.|.| +++.+++..+|++||++++++. .+++|++++||||||+|||+++.++.
T Consensus 244 ----~~~~~v~~~g-~~~~~~~~~~~~~~d~~l~~s~---~e~~~~~~lEa~a~g~PvI~~~~~~~ 301 (364)
T cd03814 244 ----ARYPNVHFLG-FLDGEELAAAYASADVFVFPSR---TETFGLVVLEAMASGLPVVAPDAGGP 301 (364)
T ss_pred ----ccCCcEEEEe-ccCHHHHHHHHHhCCEEEECcc---cccCCcHHHHHHHcCCCEEEcCCCCc
Confidence 334 899997 8999999999999999997643 36789999999999999999998764
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-26 Score=220.99 Aligned_cols=290 Identities=21% Similarity=0.238 Sum_probs=199.9
Q ss_pred CChHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHh
Q 015058 17 RSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLC 96 (414)
Q Consensus 17 ~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~ 96 (414)
...++...+..|.+. ||+|++++............ ......... .. ........ ....... +.. +
T Consensus 16 ~~~~~~~l~~~L~~~-g~~v~i~~~~~~~~~~~~~~-~~~~~~~~~--~~-----~~~~~~~~-~~~~~~~----~~~-~ 80 (374)
T cd03801 16 AERHVLELARALAAR-GHEVTVLTPGDGGLPDEEEV-GGIVVVRPP--PL-----LRVRRLLL-LLLLALR----LRR-L 80 (374)
T ss_pred HhHHHHHHHHHHHhc-CceEEEEecCCCCCCceeee-cCcceecCC--cc-----cccchhHH-HHHHHHH----HHH-H
Confidence 345666777888875 99999999876442221111 111111000 00 00000000 0011111 111 1
Q ss_pred hhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHH
Q 015058 97 VKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQA 176 (414)
Q Consensus 97 ~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~ 176 (414)
.+..+||+||++++. ......++++..++|+|+++|+..+... ..............++...+.+|.++++|+.
T Consensus 81 ~~~~~~Dii~~~~~~---~~~~~~~~~~~~~~~~i~~~h~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~ 154 (374)
T cd03801 81 LRRERFDVVHAHDWL---ALLAAALAARLLGIPLVLTVHGLEFGRP---GNELGLLLKLARALERRALRRADRIIAVSEA 154 (374)
T ss_pred hhhcCCcEEEEechh---HHHHHHHHHHhcCCcEEEEeccchhhcc---ccchhHHHHHHHHHHHHHHHhCCEEEEecHH
Confidence 234799999999973 3222225566789999999999754211 0011223455667788888999999999999
Q ss_pred HHHHHHHhhCC---cEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccc
Q 015058 177 MQHELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF 252 (414)
Q Consensus 177 ~~~~l~~~~gi---~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (414)
+++.+.+.++. ++.++||+ +...|.+.. .+.+... .
T Consensus 155 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----~~~~~~~------------------------------------~ 194 (374)
T cd03801 155 TREELRELGGVPPEKITVIPNGVDTERFRPAP----RAARRRL------------------------------------G 194 (374)
T ss_pred HHHHHHhcCCCCCCcEEEecCcccccccCccc----hHHHhhc------------------------------------C
Confidence 99999988776 48999999 666564432 1111110 1
Q ss_pred cCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHH
Q 015058 253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (414)
Q Consensus 253 l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~ 332 (414)
..++ .+.++++|++.+.||++.+++|+..+.++ .++++|+|+|+|+..+.++
T Consensus 195 ~~~~-~~~i~~~g~~~~~k~~~~~i~~~~~~~~~---------------------------~~~~~l~i~G~~~~~~~~~ 246 (374)
T cd03801 195 IPED-EPVILFVGRLVPRKGVDLLLEALAKLRKE---------------------------YPDVRLVIVGDGPLREELE 246 (374)
T ss_pred CcCC-CeEEEEecchhhhcCHHHHHHHHHHHhhh---------------------------cCCeEEEEEeCcHHHHHHH
Confidence 1223 35899999999999999999999998762 5789999999999999999
Q ss_pred HHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 333 EKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 333 ~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
+.+++++.. +|.|.| +++.+++..+|+.||++++++.. +++|++++|||++|+|||+++.++.
T Consensus 247 ~~~~~~~~~~~v~~~g-~~~~~~~~~~~~~~di~i~~~~~---~~~~~~~~Ea~~~g~pvI~~~~~~~ 310 (374)
T cd03801 247 ALAAELGLGDRVTFLG-FVPDEDLPALYAAADVFVLPSLY---EGFGLVLLEAMAAGLPVVASDVGGI 310 (374)
T ss_pred HHHHHhCCCcceEEEe-ccChhhHHHHHHhcCEEEecchh---ccccchHHHHHHcCCcEEEeCCCCh
Confidence 999999988 999997 99999999999999999987543 6789999999999999999987543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-26 Score=243.47 Aligned_cols=226 Identities=12% Similarity=0.075 Sum_probs=165.1
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhh-------cCCeEEEEEcCcchhh----hhhc-cCCCcHHHHHH-----HHHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSL-------RRSAFIVDWHNFGYTL----LSLS-LGRRSHFVSIY-----RWIEKY 162 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~-------~~~~~Iv~~H~~~~~l----~~~~-~~~~~~~~~i~-----~~~Ek~ 162 (414)
.+|||||+|++ .+++++.+++.. .++|+|+|+|+..+.- .... +-.......+. ..+.|.
T Consensus 140 ~~pDiiH~hdw---~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~ 216 (489)
T PRK14098 140 WKPDIIHCHDW---YAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYT 216 (489)
T ss_pred CCCCEEEecCc---HHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHH
Confidence 58999999997 666666666543 3799999999974310 0000 00000000000 123455
Q ss_pred HhccCCEEEEeCHHHHHHHHHh----hCC---------cEEEecCC-CCCCcCCCChH----------------HHHHHH
Q 015058 163 YGKMANGCLCVTQAMQHELAQN----WGI---------KATVLYDQ-PPEFFHPTSLE----------------EKHELF 212 (414)
Q Consensus 163 ~~k~ad~ii~vS~~~~~~l~~~----~gi---------~i~vI~n~-~~~~f~p~~~~----------------~~~~l~ 212 (414)
..+.||.|+|+|+.+++++.+. +|. ++.+|+|| |.+.|.|.... .+..++
T Consensus 217 ~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~ 296 (489)
T PRK14098 217 GVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALL 296 (489)
T ss_pred HHHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHHH
Confidence 6689999999999999998752 232 48899999 88889875421 122333
Q ss_pred HHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccC--CCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhh
Q 015058 213 CRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK--PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAI 290 (414)
Q Consensus 213 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~ 290 (414)
+++ +++ ++.| +++++||++++||++.|++|+..+.+
T Consensus 297 ~~l------------------------------------gl~~~~~~~-~i~~vgRl~~~KG~d~li~a~~~l~~----- 334 (489)
T PRK14098 297 EEV------------------------------------GLPFDEETP-LVGVIINFDDFQGAELLAESLEKLVE----- 334 (489)
T ss_pred HHh------------------------------------CCCCccCCC-EEEEeccccccCcHHHHHHHHHHHHh-----
Confidence 332 333 3444 89999999999999999999998864
Q ss_pred hccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCC--hHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEee
Q 015058 291 LNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCL 368 (414)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~--~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~ 368 (414)
++++|+|+|+|+. ++++++++++++ .+|.|.| .+++++++.+|++||++|+|
T Consensus 335 ------------------------~~~~lvivG~G~~~~~~~l~~l~~~~~-~~V~~~g-~~~~~~~~~~~a~aDi~l~P 388 (489)
T PRK14098 335 ------------------------LDIQLVICGSGDKEYEKRFQDFAEEHP-EQVSVQT-EFTDAFFHLAIAGLDMLLMP 388 (489)
T ss_pred ------------------------cCcEEEEEeCCCHHHHHHHHHHHHHCC-CCEEEEE-ecCHHHHHHHHHhCCEEEeC
Confidence 3699999999985 578899988874 4899997 78999999999999999987
Q ss_pred ccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 369 HTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 369 ~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
+ ..|++|...+|||+||+|+|+++++|.
T Consensus 389 S---~~E~~Gl~~lEAma~G~ppVv~~~GGl 416 (489)
T PRK14098 389 G---KIESCGMLQMFAMSYGTIPVAYAGGGI 416 (489)
T ss_pred C---CCCCchHHHHHHHhCCCCeEEecCCCC
Confidence 4 357889999999999999999988764
|
|
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-26 Score=219.76 Aligned_cols=219 Identities=20% Similarity=0.210 Sum_probs=172.1
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
..+||+||++.+ .+...++.+..+..++|++++.|+..... . .. ....+..++...+.+|.++++|+.++
T Consensus 91 ~~~~dii~~~~~--~~~~~~~~~~~~~~~~~~i~~~h~~~~~~----~--~~--~~~~~~~~~~~~~~~d~ii~~s~~~~ 160 (377)
T cd03798 91 RFRPDLIHAHFA--YPDGFAAALLKRKLGIPLVVTLHGSDVNL----L--PR--KRLLRALLRRALRRADAVIAVSEALA 160 (377)
T ss_pred cCCCCEEEEecc--chHHHHHHHHHHhcCCCEEEEeecchhcc----c--Cc--hhhHHHHHHHHHhcCCeEEeCCHHHH
Confidence 479999999965 24445566666777899999999875311 1 11 11345667788899999999999999
Q ss_pred HHHHHh--hCCcEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCC
Q 015058 179 HELAQN--WGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (414)
Q Consensus 179 ~~l~~~--~gi~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 255 (414)
+.+.+. .+.++.+++|+ |...|.+..... . +++ ....
T Consensus 161 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~---~~~------------------------------------~~~~ 200 (377)
T cd03798 161 DELKALGIDPEKVTVIPNGVDTERFSPADRAE-A---RKL------------------------------------GLPE 200 (377)
T ss_pred HHHHHhcCCCCceEEcCCCcCcccCCCcchHH-H---Hhc------------------------------------cCCC
Confidence 999886 33458999999 666676654211 1 111 1122
Q ss_pred CCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHH
Q 015058 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 335 (414)
Q Consensus 256 ~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i 335 (414)
+ +..++++|++.+.||++.+++|++.+.+ .+++++|+|+|+|+..+.+++.+
T Consensus 201 ~-~~~i~~~g~~~~~k~~~~li~~~~~~~~---------------------------~~~~~~l~i~g~~~~~~~~~~~~ 252 (377)
T cd03798 201 D-KKVILFVGRLVPRKGIDYLIEALARLLK---------------------------KRPDVHLVIVGDGPLREALEALA 252 (377)
T ss_pred C-ceEEEEeccCccccCHHHHHHHHHHHHh---------------------------cCCCeEEEEEcCCcchHHHHHHH
Confidence 3 3589999999999999999999999875 35789999999999999999999
Q ss_pred HHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 336 RRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 336 ~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
+++++. +|.+.| +++.+++..+|++||++++++.. +++|.+++|||++|+|||+++.++.
T Consensus 253 ~~~~~~~~v~~~g-~~~~~~~~~~~~~ad~~i~~~~~---~~~~~~~~Ea~~~G~pvI~~~~~~~ 313 (377)
T cd03798 253 AELGLEDRVTFLG-AVPHEEVPAYYAAADVFVLPSLR---EGFGLVLLEAMACGLPVVATDVGGI 313 (377)
T ss_pred HhcCCcceEEEeC-CCCHHHHHHHHHhcCeeecchhh---ccCChHHHHHHhcCCCEEEecCCCh
Confidence 999988 999997 99999999999999999976432 6789999999999999999987653
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=244.95 Aligned_cols=229 Identities=13% Similarity=0.119 Sum_probs=170.5
Q ss_pred hcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEE-EcCcchhhhhhccCCCcHHHHHHHHHHH--HHhccCCEEEEeC
Q 015058 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVD-WHNFGYTLLSLSLGRRSHFVSIYRWIEK--YYGKMANGCLCVT 174 (414)
Q Consensus 98 k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~-~H~~~~~l~~~~~~~~~~~~~i~~~~Ek--~~~k~ad~ii~vS 174 (414)
+..+||+||+|+. .+...+.+++++.|+|+|++ .|++.. ......+..-+.++.+ .+...+| ++++|
T Consensus 277 r~~rpDIVHt~~~---~a~l~g~laA~lagvpviv~~~h~~~~------~~~~r~~~~e~~~~~~a~~i~~~sd-~v~~s 346 (578)
T PRK15490 277 CERKLDYLSVWQD---GACLMIALAALIAGVPRIQLGLRGLPP------VVRKRLFKPEYEPLYQALAVVPGVD-FMSNN 346 (578)
T ss_pred HHcCCCEEEEcCc---ccHHHHHHHHHhcCCCEEEEeecccCC------cchhhHHHHHHHHhhhhceeEecch-hhhcc
Confidence 3489999999987 45556778888889999875 566321 0111111110111111 2244566 77899
Q ss_pred HHHHHHHHHhhCCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccc
Q 015058 175 QAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGID 250 (414)
Q Consensus 175 ~~~~~~l~~~~gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (414)
...++.+++.++++ +.+|||| |++.|.|... .....++++.
T Consensus 347 ~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~-~~~~~r~~~~---------------------------------- 391 (578)
T PRK15490 347 HCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSE-VPHKIWQQFT---------------------------------- 391 (578)
T ss_pred HHHHHHHHHHhCCCHHHEEEEeCCcchhhcCccch-hhHHHHHHhh----------------------------------
Confidence 99999998877776 8999999 8888887542 1122332221
Q ss_pred cccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHH
Q 015058 251 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 330 (414)
Q Consensus 251 ~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~ 330 (414)
.+++++. .+|+++||+.++||+..+++|+..+.++ .|+++|+|+|+|+++++
T Consensus 392 ~~l~~~~-~vIg~VgRl~~~Kg~~~LI~A~a~llk~---------------------------~pdirLvIVGdG~~~ee 443 (578)
T PRK15490 392 QKTQDAD-TTIGGVFRFVGDKNPFAWIDFAARYLQH---------------------------HPATRFVLVGDGDLRAE 443 (578)
T ss_pred hccCCCC-cEEEEEEEEehhcCHHHHHHHHHHHHhH---------------------------CCCeEEEEEeCchhHHH
Confidence 1233344 4889999999999999999999887652 57899999999999999
Q ss_pred HHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC--------ccc
Q 015058 331 YEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS--------VVG 401 (414)
Q Consensus 331 l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~--------~~~ 401 (414)
+++.++++|++ +|+|+| ..+|++.+|++||+||+++ ..|++|++++||||||+|||+++++| ++|
T Consensus 444 Lk~la~elgL~d~V~FlG---~~~Dv~~~LaaADVfVlPS---~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG 517 (578)
T PRK15490 444 AQKRAEQLGILERILFVG---ASRDVGYWLQKMNVFILFS---RYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSG 517 (578)
T ss_pred HHHHHHHcCCCCcEEECC---ChhhHHHHHHhCCEEEEcc---cccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcE
Confidence 99999999997 999998 5789999999999999763 35889999999999999999999864 567
Q ss_pred chhh
Q 015058 402 CLFV 405 (414)
Q Consensus 402 ~~~~ 405 (414)
.++-
T Consensus 518 ~LVp 521 (578)
T PRK15490 518 FILD 521 (578)
T ss_pred EEEC
Confidence 7653
|
|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-26 Score=235.02 Aligned_cols=298 Identities=14% Similarity=0.109 Sum_probs=193.6
Q ss_pred CChHHHHHH-HHHHhh-CCCcEEEEecCCCCCC----------cccccCCCeEEEEee-c-CCCCCCCCCCchHHHHHHH
Q 015058 17 RSPRMQYQA-LSLARQ-MSLEVDVVAYGGSKPH----------AAILEHPSIHIHTMT-Q-WPTIPRGLPKVLKPVLLLL 82 (414)
Q Consensus 17 ~~~r~~~~a-~~La~~-~g~eV~vv~~~~~~~~----------~~~~~~~~i~i~~v~-~-~~~~~~~~~~~~~~~~~l~ 82 (414)
++.|+...| ..|.+. .+++|+|+|......+ -++....++++.++. . ...+....++......
T Consensus 15 g~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--- 91 (419)
T cd03806 15 GGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYRKLVEASTYPRFTLLGQ--- 91 (419)
T ss_pred CchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecceeeeccccCCceeeHHH---
Confidence 677777655 555553 3789999997754321 111223556655542 1 1111111222221111
Q ss_pred HHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcc----hhhhhhccC-----------
Q 015058 83 KPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFG----YTLLSLSLG----------- 147 (414)
Q Consensus 83 k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~----~~l~~~~~~----------- 147 (414)
.+.+.+ +.|..+.+ .+||||+.+.... .+++++ +.+.++|+|...| ++ ..+..+..+
T Consensus 92 -~~~~~~-~~~~~~~~-~~pDv~i~~~g~~-~~~~~~---~~~~~~~~i~y~h-~P~~~~d~l~~~~~~~~~~~~~~~~~ 163 (419)
T cd03806 92 -ALGSMI-LGLEALLK-LVPDIFIDTMGYP-FTYPLV---RLLGGCPVGAYVH-YPTISTDMLQKVRSREASYNNSATIA 163 (419)
T ss_pred -HHHHHH-HHHHHHHh-cCCCEEEEcCCcc-cHHHHH---HHhcCCeEEEEec-CCcchHHHHHHHhhccccccCccchh
Confidence 121111 11221112 5899988876311 122333 3334789999999 44 222222111
Q ss_pred CCc---HH----HHHHHHHHHHHhccCCEEEEeCHHHHHHHHHhhCC--cEEEecCC-CCCCcCCCChHHHHHHHHHhhh
Q 015058 148 RRS---HF----VSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNK 217 (414)
Q Consensus 148 ~~~---~~----~~i~~~~Ek~~~k~ad~ii~vS~~~~~~l~~~~gi--~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~ 217 (414)
+++ .. ++++.++|++.++.||.++|+|+..++.+.+.++. ++.+|||+ +.+.|.+.+..
T Consensus 164 ~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~~~~~vi~~gvd~~~~~~~~~~----------- 232 (419)
T cd03806 164 RSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYPPCDVEELLKLPLD----------- 232 (419)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHhCcCCCcEEEcCCCCHHHhcccccc-----------
Confidence 111 21 33445678999999999999999999999888766 58999998 55545433200
Q ss_pred hccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCc
Q 015058 218 ILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 297 (414)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~ 297 (414)
...+. ..|+|+||+.++||++.+|+|+..+.++.+
T Consensus 233 -----------------------------------~~~~~-~~il~vgr~~~~K~~~~li~A~~~l~~~~~--------- 267 (419)
T cd03806 233 -----------------------------------EKTRE-NQILSIAQFRPEKNHPLQLRAFAKLLKRLP--------- 267 (419)
T ss_pred -----------------------------------cccCC-cEEEEEEeecCCCCHHHHHHHHHHHHHhCc---------
Confidence 01122 489999999999999999999999876310
Q ss_pred hhhhhhhhhcCCccCCCCcEEEEEEcCCC------ChHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeecc
Q 015058 298 NEEVFLKEISDGKQYLYPRLLFIITGKGP------DKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHT 370 (414)
Q Consensus 298 ~~~~~~~~~~~~~~~~~p~i~liI~G~G~------~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~ 370 (414)
+ ...++++|+|+|+|+ ..+++++++++++++ +|+|+| +++.++++.+|+.||++|.+
T Consensus 268 ----------~---~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g-~v~~~~l~~~l~~adv~v~~-- 331 (419)
T cd03806 268 ----------E---EIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVV-NAPFEELLEELSTASIGLHT-- 331 (419)
T ss_pred ----------c---cccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEec-CCCHHHHHHHHHhCeEEEEC--
Confidence 0 002469999999984 356788899999998 999997 89999999999999999964
Q ss_pred CCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 371 SSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 371 s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
+..++||++++||||||+|+|+++++|
T Consensus 332 -s~~E~Fgi~~lEAMa~G~pvIa~~~gg 358 (419)
T cd03806 332 -MWNEHFGIGVVEYMAAGLIPLAHASGG 358 (419)
T ss_pred -CccCCcccHHHHHHHcCCcEEEEcCCC
Confidence 234789999999999999999998754
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.9e-26 Score=214.87 Aligned_cols=215 Identities=21% Similarity=0.209 Sum_probs=165.6
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
..+||+||++++ ....+++.+..+. ++|++++.|+..... ...... .. .+++...+.+|.++|+|+.++
T Consensus 79 ~~~~dii~~~~~--~~~~~~~~~~~~~-~~~~i~~~~~~~~~~----~~~~~~-~~---~~~~~~~~~~d~ii~~s~~~~ 147 (353)
T cd03811 79 KEKPDVVISHLT--TTPNVLALLAARL-GTKLIVWEHNSLSLE----LKRKLR-LL---LLIRKLYRRADKIVAVSEGVK 147 (353)
T ss_pred hcCCCEEEEcCc--cchhHHHHHHhhc-CCceEEEEcCcchhh----hccchh-HH---HHHHhhccccceEEEeccchh
Confidence 369999999986 2233444454444 899999999985421 111111 11 567788899999999999999
Q ss_pred HHHHHhhCC---cEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccC
Q 015058 179 HELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (414)
Q Consensus 179 ~~l~~~~gi---~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 254 (414)
+.+.+.++. ++.++||+ +.+.+.+.... .. ++ ...
T Consensus 148 ~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~--~~---~~------------------------------------~~~ 186 (353)
T cd03811 148 EDLLKLLGIPPDKIEVIYNPIDIEEIRALAEE--PL---EL------------------------------------GIP 186 (353)
T ss_pred hhHHHhhcCCccccEEecCCcChhhcCcccch--hh---hc------------------------------------CCC
Confidence 999988773 38999999 65555443211 00 10 122
Q ss_pred CCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHH
Q 015058 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK 334 (414)
Q Consensus 255 ~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~ 334 (414)
.+ +..++++|++.+.||++.+++|++.+.+ ..++++|+|+|+|+..+.+++.
T Consensus 187 ~~-~~~i~~~g~~~~~k~~~~~i~~~~~l~~---------------------------~~~~~~l~i~G~~~~~~~~~~~ 238 (353)
T cd03811 187 PD-GPVILAVGRLSPQKGFDTLIRAFALLRK---------------------------EGPDARLVILGDGPLREELEAL 238 (353)
T ss_pred CC-ceEEEEEecchhhcChHHHHHHHHHhhh---------------------------cCCCceEEEEcCCccHHHHHHH
Confidence 33 3589999999999999999999999875 2578999999999999999999
Q ss_pred HHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 335 IRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 335 i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
++++++. +|.|.| ..+++..+++.||++++++. .+++|++++|||++|+|||+++.+|.
T Consensus 239 ~~~~~~~~~v~~~g---~~~~~~~~~~~~d~~i~ps~---~e~~~~~~~Ea~~~G~PvI~~~~~~~ 298 (353)
T cd03811 239 AKELGLADRVHFLG---FQSNPYPYLKAADLFVLSSR---YEGFPNVLLEAMALGTPVVATDCPGP 298 (353)
T ss_pred HHhcCCCccEEEec---ccCCHHHHHHhCCEEEeCcc---cCCCCcHHHHHHHhCCCEEEcCCCCh
Confidence 9999998 999998 46789999999999997643 36799999999999999999998864
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.4e-26 Score=248.94 Aligned_cols=226 Identities=14% Similarity=0.112 Sum_probs=162.9
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHh------hcCCeEEEEEcCcchhhh----hhc-cCCC-cHHHHHHHHHH-------
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASS------LRRSAFIVDWHNFGYTLL----SLS-LGRR-SHFVSIYRWIE------- 160 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~------~~~~~~Iv~~H~~~~~l~----~~~-~~~~-~~~~~i~~~~E------- 160 (414)
.+|||||+|++ ++++++.++.. +.++|+|+|+||+.|.-. .+. .|-. ..+.+ ..+++
T Consensus 609 ~~PDIIH~HDW---~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~-~d~le~~~~~~i 684 (977)
T PLN02939 609 KKPDIIHCHDW---QTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDR-PDRMQDNAHGRI 684 (977)
T ss_pred CCCCEEEECCc---cHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccC-hhhhhhccCCch
Confidence 69999999998 55554322221 356899999999854210 000 0000 00000 01111
Q ss_pred ---HHHhccCCEEEEeCHHHHHHHHHhhCC-----------cEEEecCC-CCCCcCCCChH----------------HHH
Q 015058 161 ---KYYGKMANGCLCVTQAMQHELAQNWGI-----------KATVLYDQ-PPEFFHPTSLE----------------EKH 209 (414)
Q Consensus 161 ---k~~~k~ad~ii~vS~~~~~~l~~~~gi-----------~i~vI~n~-~~~~f~p~~~~----------------~~~ 209 (414)
|.-...||.|+|||+.+++++...+|. ++.+|+|| |.+.|.|.... .+.
T Consensus 685 N~LK~GIv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~ 764 (977)
T PLN02939 685 NVVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKA 764 (977)
T ss_pred HHHHHHHHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhH
Confidence 222346999999999999998764331 27899999 88889886421 133
Q ss_pred HHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCC---CCCeEEEEeccCCCCCChHHHHHHHHHhHHH
Q 015058 210 ELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP---NRPALVVSSTSWTPDEDFGILLEAALMYDRR 286 (414)
Q Consensus 210 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~ 286 (414)
++++++ |+++ +.| +|+++||++++||++.|++|+..+.+
T Consensus 765 aLRkel------------------------------------GL~~~d~d~p-LIg~VGRL~~QKGiDlLleA~~~Ll~- 806 (977)
T PLN02939 765 ALRKQL------------------------------------GLSSADASQP-LVGCITRLVPQKGVHLIRHAIYKTAE- 806 (977)
T ss_pred HHHHHh------------------------------------CCCcccccce-EEEEeecCCcccChHHHHHHHHHHhh-
Confidence 444443 3442 345 89999999999999999999987753
Q ss_pred HhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCC---hHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhc
Q 015058 287 VAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD---KESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSA 362 (414)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~---~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~a 362 (414)
++++|+|+|+||+ +++++++++++++. +|+|+| +.+.+..+.+|++|
T Consensus 807 ----------------------------~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG-~~de~lah~IYAaA 857 (977)
T PLN02939 807 ----------------------------LGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLIL-KYDEALSHSIYAAS 857 (977)
T ss_pred ----------------------------cCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEe-ccCHHHHHHHHHhC
Confidence 3689999999986 36788899999987 899997 76777788999999
Q ss_pred cEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 363 DLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 363 Dl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
|+||+|+. .|++|..++|||+||+|+|+++++|.
T Consensus 858 DIFLmPSr---~EPfGLvqLEAMAyGtPPVVs~vGGL 891 (977)
T PLN02939 858 DMFIIPSM---FEPCGLTQMIAMRYGSVPIVRKTGGL 891 (977)
T ss_pred CEEEECCC---ccCCcHHHHHHHHCCCCEEEecCCCC
Confidence 99998743 57899999999999999999998884
|
|
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-26 Score=237.50 Aligned_cols=300 Identities=12% Similarity=0.053 Sum_probs=184.9
Q ss_pred CCCCEEEEEEeCCCCCChHH----HHHHHHHHhhCC-CcEEEEecCCCCCC-------------cc-----cccCCCeEE
Q 015058 2 GRRGRACVVVLGDLGRSPRM----QYQALSLARQMS-LEVDVVAYGGSKPH-------------AA-----ILEHPSIHI 58 (414)
Q Consensus 2 ~~~~~~~v~~~~d~~~~~r~----~~~a~~La~~~g-~eV~vv~~~~~~~~-------------~~-----~~~~~~i~i 58 (414)
+..-++.|+.-+-++..+|+ ...+..|+++ | |+|+|+++...... +. +.+..+-++
T Consensus 2 ~~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~-G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~~~v 80 (462)
T PLN02846 2 QKKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKD-GDREVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLEERI 80 (462)
T ss_pred CCCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhc-CCcEEEEEecCCccccccccccccccccCchhhhhhhhhhccCeE
Confidence 33445666666666555555 5677899996 9 79999998643100 00 000113355
Q ss_pred EEeecCCCCCCCCCC-c---hHHHHHHHHHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHH--HHHHHhhcCCeEEE
Q 015058 59 HTMTQWPTIPRGLPK-V---LKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVA--VKWASSLRRSAFIV 132 (414)
Q Consensus 59 ~~v~~~~~~~~~~~~-~---~~~~~~l~k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~--~~la~~~~~~~~Iv 132 (414)
.++++.+.+. ++. . ...+. ...-+.+ .+ +..+|||||+++|..+ +++ +...++..++ +|.
T Consensus 81 ~r~~s~~~p~--yp~r~~~~~r~~~-~~~~i~~-------~l-~~~~pDVIHv~tP~~L--G~~~~g~~~~~k~~~-vV~ 146 (462)
T PLN02846 81 SFLPKFSIKF--YPGKFSTDKRSIL-PVGDISE-------TI-PDEEADIAVLEEPEHL--TWYHHGKRWKTKFRL-VIG 146 (462)
T ss_pred EEeccccccc--CcccccccccccC-ChHHHHH-------HH-HhcCCCEEEEcCchhh--hhHHHHHHHHhcCCc-EEE
Confidence 5666433221 111 0 00000 0011111 11 2379999999998422 232 3333333344 676
Q ss_pred EEcCcchhhhhhccCCCcH-HHHHHHHHHHHHhcc-CCEEEEeCHHHHHHHHHhhCCcEEEecCC-CCCCcCCCChHHHH
Q 015058 133 DWHNFGYTLLSLSLGRRSH-FVSIYRWIEKYYGKM-ANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKH 209 (414)
Q Consensus 133 ~~H~~~~~l~~~~~~~~~~-~~~i~~~~Ek~~~k~-ad~ii~vS~~~~~~l~~~~gi~i~vI~n~-~~~~f~p~~~~~~~ 209 (414)
++|....... .+-.... ...+.+++.+|+.+. +|.+++.|+.+++ +.+. +.+..+| |+++|+|....
T Consensus 147 tyHT~y~~Y~--~~~~~g~~~~~l~~~~~~~~~r~~~d~vi~pS~~~~~-l~~~----~i~~v~GVd~~~f~~~~~~--- 216 (462)
T PLN02846 147 IVHTNYLEYV--KREKNGRVKAFLLKYINSWVVDIYCHKVIRLSAATQD-YPRS----IICNVHGVNPKFLEIGKLK--- 216 (462)
T ss_pred EECCChHHHH--HHhccchHHHHHHHHHHHHHHHHhcCEEEccCHHHHH-HhhC----EEecCceechhhcCCCccc---
Confidence 8998421111 1101111 122333444555433 8999999998877 5432 3333467 88888876421
Q ss_pred HHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCC-CeEEEEeccCCCCCChHHHHHHHHHhHHHHh
Q 015058 210 ELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNR-PALVVSSTSWTPDEDFGILLEAALMYDRRVA 288 (414)
Q Consensus 210 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~ 288 (414)
.++... ..+. ..+++|+||+.++||++.||+|++.+.+
T Consensus 217 -~~~~~~-------------------------------------~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~--- 255 (462)
T PLN02846 217 -LEQQKN-------------------------------------GEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQK--- 255 (462)
T ss_pred -HhhhcC-------------------------------------CCCCcceEEEEEecCcccCCHHHHHHHHHHHHh---
Confidence 111100 1111 1268899999999999999999998875
Q ss_pred hhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEee
Q 015058 289 AILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCL 368 (414)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~ 368 (414)
..|+++|+|+|+||+++++++++++++++...|.| .. +...+++++|+||.+
T Consensus 256 ------------------------~~~~~~l~ivGdGp~~~~L~~~a~~l~l~~~vf~G-~~---~~~~~~~~~DvFv~p 307 (462)
T PLN02846 256 ------------------------ELSGLEVDLYGSGEDSDEVKAAAEKLELDVRVYPG-RD---HADPLFHDYKVFLNP 307 (462)
T ss_pred ------------------------hCCCeEEEEECCCccHHHHHHHHHhcCCcEEEECC-CC---CHHHHHHhCCEEEEC
Confidence 25789999999999999999999999998323665 43 334799999999976
Q ss_pred ccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 369 HTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 369 ~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
+ ..|++|++++||||||+|||+++.+|
T Consensus 308 S---~~Et~g~v~lEAmA~G~PVVa~~~~~ 334 (462)
T PLN02846 308 S---TTDVVCTTTAEALAMGKIVVCANHPS 334 (462)
T ss_pred C---CcccchHHHHHHHHcCCcEEEecCCC
Confidence 4 35789999999999999999999876
|
|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.3e-27 Score=243.17 Aligned_cols=218 Identities=16% Similarity=0.146 Sum_probs=169.8
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccC--------CCcHHHHHHHHHHHHHhccCCEE
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLG--------RRSHFVSIYRWIEKYYGKMANGC 170 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~--------~~~~~~~i~~~~Ek~~~k~ad~i 170 (414)
..++|++|+|+++ .+++++.++++..++|+|++.|+....-....+. .++.+.+++.++++..++.||.|
T Consensus 171 ~~~~dviH~~s~~--~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~I 248 (475)
T cd03813 171 LPKADVYHAVSTG--YAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRI 248 (475)
T ss_pred CCCCCEEeccCcc--hHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 3589999999762 3456677778888999999999963210000000 12234566778889999999999
Q ss_pred EEeCHHHHHHHHHhhCCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeec
Q 015058 171 LCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSL 246 (414)
Q Consensus 171 i~vS~~~~~~l~~~~gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (414)
+++|+..++.+.+ +|.+ +.+|||| +.+.|.|.... .
T Consensus 249 i~~s~~~~~~~~~-~g~~~~ki~vIpNgid~~~f~~~~~~-------~-------------------------------- 288 (475)
T cd03813 249 TTLYEGNRERQIE-DGADPEKIRVIPNGIDPERFAPARRA-------R-------------------------------- 288 (475)
T ss_pred EecCHHHHHHHHH-cCCCHHHeEEeCCCcCHHHcCCcccc-------c--------------------------------
Confidence 9999999987655 4764 8899999 76777654310 0
Q ss_pred cccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCC
Q 015058 247 AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP 326 (414)
Q Consensus 247 ~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~ 326 (414)
..+++ ++|+++||+.+.||++.+++|++.++++ .|+++|+|+|+|+
T Consensus 289 ------~~~~~-~~i~~vGrl~~~Kg~~~li~a~~~l~~~---------------------------~p~~~l~IvG~g~ 334 (475)
T cd03813 289 ------PEKEP-PVVGLIGRVVPIKDIKTFIRAAAIVRKK---------------------------IPDAEGWVIGPTD 334 (475)
T ss_pred ------cCCCC-cEEEEEeccccccCHHHHHHHHHHHHHh---------------------------CCCeEEEEECCCC
Confidence 11233 4899999999999999999999998863 6899999999995
Q ss_pred C----hHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 327 D----KESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 327 ~----~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
+ .+++++++++++++ +|+|+| .++++.+|++||++|+++ ..+++|++++||||||+|||+|+++|.
T Consensus 335 ~~~~~~~e~~~li~~l~l~~~V~f~G----~~~v~~~l~~aDv~vlpS---~~Eg~p~~vlEAma~G~PVVatd~g~~ 405 (475)
T cd03813 335 EDPEYAEECRELVESLGLEDNVKFTG----FQNVKEYLPKLDVLVLTS---ISEGQPLVILEAMAAGIPVVATDVGSC 405 (475)
T ss_pred cChHHHHHHHHHHHHhCCCCeEEEcC----CccHHHHHHhCCEEEeCc---hhhcCChHHHHHHHcCCCEEECCCCCh
Confidence 3 45678889999997 999997 788999999999999764 346899999999999999999998763
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.5e-26 Score=237.43 Aligned_cols=224 Identities=15% Similarity=0.098 Sum_probs=159.5
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhh--cCCeEEEEEcCcchhhh-h---h-ccCCC-cHH--HHH--H--HHHHHHHhc
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTLL-S---L-SLGRR-SHF--VSI--Y--RWIEKYYGK 165 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~--~~~~~Iv~~H~~~~~l~-~---~-~~~~~-~~~--~~i--~--~~~Ek~~~k 165 (414)
.+|||||+|++ ++++++.+++.. .++|+|+|+|+..+.-. . . .++.. ..+ ..+ + ..+.|+..+
T Consensus 132 ~~pDIiH~Hdw---~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~ 208 (485)
T PRK14099 132 FVPDIVHAHDW---QAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ 208 (485)
T ss_pred CCCCEEEECCc---HHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHH
Confidence 69999999997 666666555432 36899999999754100 0 0 00000 000 000 0 013567778
Q ss_pred cCCEEEEeCHHHHHHHHHhh---C---------CcEEEecCC-CCCCcCCCChH----------------HHHHHHHHhh
Q 015058 166 MANGCLCVTQAMQHELAQNW---G---------IKATVLYDQ-PPEFFHPTSLE----------------EKHELFCRLN 216 (414)
Q Consensus 166 ~ad~ii~vS~~~~~~l~~~~---g---------i~i~vI~n~-~~~~f~p~~~~----------------~~~~l~~~l~ 216 (414)
.||.|+|+|+.+++++.+.+ | .++.+|+|| |++.|.|.... .+.++++++
T Consensus 209 ~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~- 287 (485)
T PRK14099 209 LADRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARF- 287 (485)
T ss_pred hcCeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHc-
Confidence 99999999999999987532 1 238899999 88889886421 123344443
Q ss_pred hhccCCCCccccccCCCCCCCCccceeeeccccccccC--CCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccC
Q 015058 217 KILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK--PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 294 (414)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~ 294 (414)
+++ ++.+ +++++||++++||++.|++|+..+.+
T Consensus 288 -----------------------------------gl~~~~~~~-li~~VgRL~~~KG~d~Li~A~~~l~~--------- 322 (485)
T PRK14099 288 -----------------------------------GLDPDPDAL-LLGVISRLSWQKGLDLLLEALPTLLG--------- 322 (485)
T ss_pred -----------------------------------CCCcccCCc-EEEEEecCCccccHHHHHHHHHHHHh---------
Confidence 343 2343 88899999999999999999998864
Q ss_pred CCchhhhhhhhhcCCccCCCCcEEEEEEcCCC--ChHHHHHHHHHcCCCcEEEecCCCChhhHHHHH-hhccEEEeeccC
Q 015058 295 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL-GSADLGVCLHTS 371 (414)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~--~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l-~~aDl~V~~~~s 371 (414)
.+++|+|+|+|+ .++.+++++++++...+.|+| .+++++.+| ++||+||+|+.
T Consensus 323 --------------------~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G---~~~~l~~~~~a~aDifv~PS~- 378 (485)
T PRK14099 323 --------------------EGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIG---YDEALAHLIQAGADALLVPSR- 378 (485)
T ss_pred --------------------cCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeC---CCHHHHHHHHhcCCEEEECCc-
Confidence 258999999997 367888888887633347888 588999987 57999998743
Q ss_pred CCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 372 SSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 372 ~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
.|++|..++|||+||+|+|+++++|
T Consensus 379 --~E~fGl~~lEAma~G~ppVvs~~GG 403 (485)
T PRK14099 379 --FEPCGLTQLCALRYGAVPVVARVGG 403 (485)
T ss_pred --cCCCcHHHHHHHHCCCCcEEeCCCC
Confidence 5789999999999998888888776
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.6e-26 Score=234.24 Aligned_cols=229 Identities=18% Similarity=0.093 Sum_probs=161.6
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhh------cCCeEEEEEcCcchhh----hhhc-cCCCc--HH------HHHHHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSL------RRSAFIVDWHNFGYTL----LSLS-LGRRS--HF------VSIYRWI 159 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~------~~~~~Iv~~H~~~~~l----~~~~-~~~~~--~~------~~i~~~~ 159 (414)
..+|||||+|++ ++++++.+++.. .++|+|+|.|+..+.- .... .+... .+ ......+
T Consensus 127 ~~~pDviH~hd~---~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (476)
T cd03791 127 GWKPDIIHCHDW---HTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNF 203 (476)
T ss_pred CCCCcEEEECch---HHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccH
Confidence 379999999998 555555555443 4899999999974310 0000 00000 00 0001245
Q ss_pred HHHHhccCCEEEEeCHHHHHHHHHh------------hCCcEEEecCC-CCCCcCCCChH----------------HHHH
Q 015058 160 EKYYGKMANGCLCVTQAMQHELAQN------------WGIKATVLYDQ-PPEFFHPTSLE----------------EKHE 210 (414)
Q Consensus 160 Ek~~~k~ad~ii~vS~~~~~~l~~~------------~gi~i~vI~n~-~~~~f~p~~~~----------------~~~~ 210 (414)
++...+.||.++++|+.+++++.+. ...++.+|+|| |.+.|.|.... .+..
T Consensus 204 ~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~ 283 (476)
T cd03791 204 LKAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAA 283 (476)
T ss_pred HHHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHH
Confidence 7777899999999999999887631 12348999999 78888775321 1233
Q ss_pred HHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhh
Q 015058 211 LFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAI 290 (414)
Q Consensus 211 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~ 290 (414)
++++++.+ ..++.+ +|+++||++++||++.|++|++.+.++
T Consensus 284 l~~~~g~~----------------------------------~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~~---- 324 (476)
T cd03791 284 LQEELGLP----------------------------------VDPDAP-LFGFVGRLTEQKGIDLLLEALPELLEL---- 324 (476)
T ss_pred HHHHcCCC----------------------------------cCCCCC-EEEEEeeccccccHHHHHHHHHHHHHc----
Confidence 44443210 124555 899999999999999999999988751
Q ss_pred hccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCC--hHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEee
Q 015058 291 LNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCL 368 (414)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~--~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~ 368 (414)
+++|+|+|+|+. ++.++++++++ ..+|.|.+++ +.++++.+|++||++++|
T Consensus 325 -------------------------~~~lvi~G~g~~~~~~~~~~~~~~~-~~~v~~~~~~-~~~~~~~~~~~aDv~l~p 377 (476)
T cd03791 325 -------------------------GGQLVILGSGDPEYEEALRELAARY-PGRVAVLIGY-DEALAHLIYAGADFFLMP 377 (476)
T ss_pred -------------------------CcEEEEEecCCHHHHHHHHHHHHhC-CCcEEEEEeC-CHHHHHHHHHhCCEEECC
Confidence 389999999964 35667776665 4488887644 678889999999999976
Q ss_pred ccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 369 HTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 369 ~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
+ ..|++|..++|||+||+|+|+++++|.
T Consensus 378 S---~~E~~gl~~lEAma~G~pvI~~~~gg~ 405 (476)
T cd03791 378 S---RFEPCGLTQMYAMRYGTVPIVRATGGL 405 (476)
T ss_pred C---CCCCCcHHHHHHhhCCCCCEECcCCCc
Confidence 3 357789999999999999999998874
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-25 Score=213.40 Aligned_cols=263 Identities=18% Similarity=0.174 Sum_probs=179.6
Q ss_pred HHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 015058 23 YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASP 102 (414)
Q Consensus 23 ~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k~~~~ 102 (414)
..+..|+++ ||+|++++..... .......+++.+..++ ........... ..... +..++ +..+|
T Consensus 21 ~l~~~L~~~-g~~v~v~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~-------~~~~~----~~~~l-~~~~~ 84 (348)
T cd03820 21 NLANALAEK-GHEVTIISLDKGE-PPFYELDPKIKVIDLG--DKRDSKLLARF-------KKLRR----LRKLL-KNNKP 84 (348)
T ss_pred HHHHHHHhC-CCeEEEEecCCCC-CCccccCCccceeecc--cccccchhccc-------cchHH----HHHhh-cccCC
Confidence 455667665 9999999987653 1112234567776665 21110000001 11111 11111 33799
Q ss_pred cEEEEeCCCCchHHHHHHHHHhhcC-CeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHHHH
Q 015058 103 DVFLVQNPPSVPTLVAVKWASSLRR-SAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181 (414)
Q Consensus 103 Dvvh~~~pp~~~~~~~~~la~~~~~-~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~~l 181 (414)
|+||++.++ ....++....+ +|++++.|+..... .... .....++.+++.+|.++|+|+.++...
T Consensus 85 d~i~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~-------~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~ 150 (348)
T cd03820 85 DVVISFLTS-----LLTFLASLGLKIVKLIVSEHNSPDAY-------KKRL--RRLLLRRLLYRRADAVVVLTEEDRALY 150 (348)
T ss_pred CEEEEcCch-----HHHHHHHHhhccccEEEecCCCccch-------hhhh--HHHHHHHHHHhcCCEEEEeCHHHHHHh
Confidence 999999873 11222223334 48899989864311 1111 111257888899999999999997333
Q ss_pred HHhhCCcEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeE
Q 015058 182 AQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPAL 260 (414)
Q Consensus 182 ~~~~gi~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 260 (414)
....+.++.++||+ +...+.+. ...++ ..
T Consensus 151 ~~~~~~~~~vi~~~~~~~~~~~~-------------------------------------------------~~~~~-~~ 180 (348)
T cd03820 151 YKKFNKNVVVIPNPLPFPPEEPS-------------------------------------------------SDLKS-KR 180 (348)
T ss_pred hccCCCCeEEecCCcChhhcccc-------------------------------------------------CCCCC-cE
Confidence 22223448999999 43322111 01123 48
Q ss_pred EEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHHHcCC
Q 015058 261 VVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL 340 (414)
Q Consensus 261 i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~l~l 340 (414)
++++|++.+.||++.+++|++.+.+ ..|+++|+|+|+|++++.+++.++++++
T Consensus 181 i~~~g~~~~~K~~~~l~~~~~~l~~---------------------------~~~~~~l~i~G~~~~~~~~~~~~~~~~~ 233 (348)
T cd03820 181 ILAVGRLVPQKGFDLLIEAWAKIAK---------------------------KHPDWKLRIVGDGPEREALEALIKELGL 233 (348)
T ss_pred EEEEEeeccccCHHHHHHHHHHHHh---------------------------cCCCeEEEEEeCCCCHHHHHHHHHHcCC
Confidence 9999999999999999999999875 3678999999999999999999999999
Q ss_pred C-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 341 K-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 341 ~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
. +|.|.| ..+++..+|++||++++++. .+++|.+++|||+||+|||+++.++
T Consensus 234 ~~~v~~~g---~~~~~~~~~~~ad~~i~ps~---~e~~~~~~~Ea~a~G~Pvi~~~~~~ 286 (348)
T cd03820 234 EDRVILLG---FTKNIEEYYAKASIFVLTSR---FEGFPMVLLEAMAFGLPVISFDCPT 286 (348)
T ss_pred CCeEEEcC---CcchHHHHHHhCCEEEeCcc---ccccCHHHHHHHHcCCCEEEecCCC
Confidence 8 999998 48999999999999997643 3689999999999999999998754
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-25 Score=249.87 Aligned_cols=211 Identities=18% Similarity=0.155 Sum_probs=159.0
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHh------hcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEe
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASS------LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCV 173 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~------~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~v 173 (414)
.+|||||+|++ ++++++.+++. +.++|+|+|+|+..+ . .+. + +.....||.|+||
T Consensus 708 ~~PDIIHaHDW---~talva~llk~~~~~~~~~~~p~V~TiHnl~~-------~-~n~-------l-k~~l~~AD~ViTV 768 (1036)
T PLN02316 708 FHPDIIHCHDW---SSAPVAWLFKDHYAHYGLSKARVVFTIHNLEF-------G-ANH-------I-GKAMAYADKATTV 768 (1036)
T ss_pred CCCCEEEECCC---hHHHHHHHHHHhhhhhccCCCCEEEEeCCccc-------c-hhH-------H-HHHHHHCCEEEeC
Confidence 58999999998 55555555544 246899999999753 1 111 1 2344789999999
Q ss_pred CHHHHHHHHHhhCC-----cEEEecCC-CCCCcCCCCh-----------------HHHHHHHHHhhhhccCCCCcccccc
Q 015058 174 TQAMQHELAQNWGI-----KATVLYDQ-PPEFFHPTSL-----------------EEKHELFCRLNKILHQPLGVQDCVS 230 (414)
Q Consensus 174 S~~~~~~l~~~~gi-----~i~vI~n~-~~~~f~p~~~-----------------~~~~~l~~~l~~~~~~~~~~~~~~~ 230 (414)
|+.+++++.....+ ++.+|+|| |++.|.|... ..+..+++++
T Consensus 769 S~tya~EI~~~~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~l--------------- 833 (1036)
T PLN02316 769 SPTYSREVSGNSAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRL--------------- 833 (1036)
T ss_pred CHHHHHHHHhccCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHh---------------
Confidence 99999998765332 38899999 8888877421 0122344443
Q ss_pred CCCCCCCCccceeeeccccccccCC-CCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCC
Q 015058 231 NGMEGQKADETIFTSLAGIDVFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDG 309 (414)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (414)
+++. +.| +|+++|||+++||++.|++|+..+.+
T Consensus 834 ---------------------GL~~~d~p-lVg~VGRL~~qKGvdlLi~Al~~ll~------------------------ 867 (1036)
T PLN02316 834 ---------------------GLKQADLP-LVGIITRLTHQKGIHLIKHAIWRTLE------------------------ 867 (1036)
T ss_pred ---------------------CCCcccCe-EEEEEeccccccCHHHHHHHHHHHhh------------------------
Confidence 3442 455 89999999999999999999998764
Q ss_pred ccCCCCcEEEEEEcCCCC---hHHHHHHHHHcCC--C-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHH
Q 015058 310 KQYLYPRLLFIITGKGPD---KESYEEKIRRLRL--K-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCY 383 (414)
Q Consensus 310 ~~~~~p~i~liI~G~G~~---~e~l~~~i~~l~l--~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~E 383 (414)
++++|+|+|+||+ ++.++++++++++ . +|.|.| ..+......+|++||+||+|+ ..|++|...+|
T Consensus 868 -----~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g-~~de~lah~iyaaADiflmPS---~~EP~GLvqLE 938 (1036)
T PLN02316 868 -----RNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCL-TYDEPLSHLIYAGADFILVPS---IFEPCGLTQLT 938 (1036)
T ss_pred -----cCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEe-cCCHHHHHHHHHhCcEEEeCC---cccCccHHHHH
Confidence 3689999999986 4678889999876 3 799987 333333358999999999874 35789999999
Q ss_pred HHHcCCeEEEeeeCCc
Q 015058 384 CWYSRYSLKLLWTCSV 399 (414)
Q Consensus 384 ama~G~Pvi~s~~~~~ 399 (414)
||+||+|+|+++++|.
T Consensus 939 AMa~GtppVvs~vGGL 954 (1036)
T PLN02316 939 AMRYGSIPVVRKTGGL 954 (1036)
T ss_pred HHHcCCCeEEEcCCCc
Confidence 9999999999998874
|
|
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-26 Score=229.68 Aligned_cols=199 Identities=15% Similarity=0.139 Sum_probs=148.5
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeE--EEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAF--IVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQA 176 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~--Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~ 176 (414)
..+||+||+|++ ....++.++++..+.|+ +...|.... .... . ...+ .+.+|.++++|+.
T Consensus 82 ~~~~Dii~~~~~---~~~~~~~~~~~~~~~~~~~~~~~h~~~~--------~~~~-~----~~~~--~~~~d~~i~~S~~ 143 (359)
T PRK09922 82 ETQPDIVICIDV---ISCLYANKARKKSGKQFKIFSWPHFSLD--------HKKH-A----ECKK--ITCADYHLAISSG 143 (359)
T ss_pred hcCCCEEEEcCH---HHHHHHHHHHHHhCCCCeEEEEecCccc--------ccch-h----hhhh--hhcCCEEEEcCHH
Confidence 479999999986 34455666666666554 444564311 1111 1 1111 2789999999999
Q ss_pred HHHHHHHhhCCc---EEEecCC-CCCCcC-CCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeecccccc
Q 015058 177 MQHELAQNWGIK---ATVLYDQ-PPEFFH-PTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDV 251 (414)
Q Consensus 177 ~~~~l~~~~gi~---i~vI~n~-~~~~f~-p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (414)
+++.+.+. |++ +.+|||+ +.+.|. |.+ .
T Consensus 144 ~~~~~~~~-~~~~~ki~vi~N~id~~~~~~~~~-~--------------------------------------------- 176 (359)
T PRK09922 144 IKEQMMAR-GISAQRISVIYNPVEIKTIIIPPP-E--------------------------------------------- 176 (359)
T ss_pred HHHHHHHc-CCCHHHEEEEcCCCCHHHccCCCc-c---------------------------------------------
Confidence 99999864 764 8999999 533221 211 0
Q ss_pred ccCCCCCeEEEEeccCC--CCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChH
Q 015058 252 FLKPNRPALVVSSTSWT--PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE 329 (414)
Q Consensus 252 ~l~~~~~~~i~~vgrl~--~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e 329 (414)
..++ ..++++||+. +.||++.+++|+..+. ++++|+|+|+|++++
T Consensus 177 --~~~~-~~i~~~Grl~~~~~k~~~~l~~a~~~~~------------------------------~~~~l~ivG~g~~~~ 223 (359)
T PRK09922 177 --RDKP-AVFLYVGRLKFEGQKNVKELFDGLSQTT------------------------------GEWQLHIIGDGSDFE 223 (359)
T ss_pred --cCCC-cEEEEEEEEecccCcCHHHHHHHHHhhC------------------------------CCeEEEEEeCCccHH
Confidence 0122 4889999997 4599999999998763 269999999999999
Q ss_pred HHHHHHHHcCCC-cEEEecCCCC--hhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEee-eCCc
Q 015058 330 SYEEKIRRLRLK-RVAFRTMWLS--AEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLW-TCSV 399 (414)
Q Consensus 330 ~l~~~i~~l~l~-~V~f~g~~v~--~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~-~~~~ 399 (414)
++++.++++++. +|+|.| +++ .++++.+|++||++|+++ ..|++|++++||||||+|||+++ ++|.
T Consensus 224 ~l~~~~~~~~l~~~v~f~G-~~~~~~~~~~~~~~~~d~~v~~s---~~Egf~~~~lEAma~G~Pvv~s~~~~g~ 293 (359)
T PRK09922 224 KCKAYSRELGIEQRIIWHG-WQSQPWEVVQQKIKNVSALLLTS---KFEGFPMTLLEAMSYGIPCISSDCMSGP 293 (359)
T ss_pred HHHHHHHHcCCCCeEEEec-ccCCcHHHHHHHHhcCcEEEECC---cccCcChHHHHHHHcCCCEEEeCCCCCh
Confidence 999999999998 999997 764 488999999999999763 35789999999999999999999 5543
|
|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-25 Score=213.73 Aligned_cols=226 Identities=16% Similarity=0.163 Sum_probs=164.5
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHH-HH-HHHHHHHHhccCCEEEEeCHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFV-SI-YRWIEKYYGKMANGCLCVTQA 176 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~-~i-~~~~Ek~~~k~ad~ii~vS~~ 176 (414)
..+||+||+|++....... +....+..++|++++.|+...... . ..+.+. .+ ..+.++...+.+|.++++|+.
T Consensus 85 ~~~~dii~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~ 159 (375)
T cd03821 85 IREADIVHVHGLWSYPSLA-AARAARKYGIPYVVSPHGMLDPWA---L-PHKALKKRLAWFLFERRLLQAAAAVHATSEQ 159 (375)
T ss_pred CCCCCEEEEecccchHHHH-HHHHHHHhCCCEEEEccccccccc---c-ccchhhhHHHHHHHHHHHHhcCCEEEECCHH
Confidence 4789999999864333333 333344578999999998643211 0 111221 12 234567788899999999988
Q ss_pred HHHHHHHhh-CCcEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccC
Q 015058 177 MQHELAQNW-GIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (414)
Q Consensus 177 ~~~~l~~~~-gi~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 254 (414)
..+.+.... ..++.++||+ +.+.|.+.... .. ++++ +.+
T Consensus 160 ~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~--~~-~~~~------------------------------------~~~ 200 (375)
T cd03821 160 EAAEIRRLGLKAPIAVIPNGVDIPPFAALPSR--GR-RRKF------------------------------------PIL 200 (375)
T ss_pred HHHHHHhhCCcccEEEcCCCcChhccCcchhh--hh-hhhc------------------------------------cCC
Confidence 777665532 2338999999 66667654321 11 2221 223
Q ss_pred CCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCC--hHHHH
Q 015058 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYE 332 (414)
Q Consensus 255 ~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~--~e~l~ 332 (414)
+++ ..++++||+.+.||++.+++|+..+.+ +.++++|+|+|+|+. .+.++
T Consensus 201 ~~~-~~i~~~G~~~~~K~~~~li~a~~~l~~---------------------------~~~~~~l~i~G~~~~~~~~~~~ 252 (375)
T cd03821 201 PDK-RIILFLGRLHPKKGLDLLIEAFAKLAE---------------------------RFPDWHLVIAGPDEGGYRAELK 252 (375)
T ss_pred CCC-cEEEEEeCcchhcCHHHHHHHHHHhhh---------------------------hcCCeEEEEECCCCcchHHHHH
Confidence 344 489999999999999999999999886 367899999998754 45566
Q ss_pred HHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCcc
Q 015058 333 EKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSVV 400 (414)
Q Consensus 333 ~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~~ 400 (414)
..++++++. +|.|+| +++.+++..+|++||++|+++. .+++|++++|||+||+|||+++.+|..
T Consensus 253 ~~~~~~~~~~~v~~~g-~~~~~~~~~~~~~adv~v~ps~---~e~~~~~~~Eama~G~PvI~~~~~~~~ 317 (375)
T cd03821 253 QIAAALGLEDRVTFTG-MLYGEDKAAALADADLFVLPSH---SENFGIVVAEALACGTPVVTTDKVPWQ 317 (375)
T ss_pred HHHHhcCccceEEEcC-CCChHHHHHHHhhCCEEEeccc---cCCCCcHHHHHHhcCCCEEEcCCCCHH
Confidence 666888987 999997 9999999999999999997643 378999999999999999999987754
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.3e-26 Score=226.61 Aligned_cols=214 Identities=13% Similarity=0.115 Sum_probs=150.0
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
..+||+||+|++. + ..+ ..+.+..++|+|+++|..... .. ..+.+++ +.+.+.+|.+++.|+..
T Consensus 83 ~~~~Dvv~~h~~~--~-~~~-~~~~~~~~~~~i~~~H~~~~~--------~~--~~~~~~~-~~~~~~~d~~i~~~~~~- 146 (372)
T cd03792 83 DLDADVVVIHDPQ--P-LAL-PLFKKKRGRPWIWRCHIDLSS--------PN--RRVWDFL-QPYIEDYDAAVFHLPEY- 146 (372)
T ss_pred cCCCCEEEECCCC--c-hhH-HHhhhcCCCeEEEEeeeecCC--------Cc--HHHHHHH-HHHHHhCCEEeecHHHh-
Confidence 4689999999873 2 222 222333489999999975321 11 1222333 44557899999988432
Q ss_pred HHHHHhhCCcEEEecCC-CCCC-c-CCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCC
Q 015058 179 HELAQNWGIKATVLYDQ-PPEF-F-HPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (414)
Q Consensus 179 ~~l~~~~gi~i~vI~n~-~~~~-f-~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 255 (414)
+.+....+..++||+ |+.. + .+.+.+++..+++++ ++++
T Consensus 147 --~~~~~~~~~~vipngvd~~~~~~~~~~~~~~~~~~~~~------------------------------------~~~~ 188 (372)
T cd03792 147 --VPPQVPPRKVIIPPSIDPLSGKNRELSPADIEYILEKY------------------------------------GIDP 188 (372)
T ss_pred --cCCCCCCceEEeCCCCCCCccccCCCCHHHHHHHHHHh------------------------------------CCCC
Confidence 222222234499999 6542 2 122323344455443 3445
Q ss_pred CCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCCh-----HH
Q 015058 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-----ES 330 (414)
Q Consensus 256 ~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~-----e~ 330 (414)
+++ +|+++||+.++||++.|++|++.+.+ ..|+++|+|+|+|+.+ +.
T Consensus 189 ~~~-~i~~vgrl~~~Kg~~~ll~a~~~l~~---------------------------~~~~~~l~i~G~g~~~~~~~~~~ 240 (372)
T cd03792 189 ERP-YITQVSRFDPWKDPFGVIDAYRKVKE---------------------------RVPDPQLVLVGSGATDDPEGWIV 240 (372)
T ss_pred CCc-EEEEEeccccccCcHHHHHHHHHHHh---------------------------hCCCCEEEEEeCCCCCCchhHHH
Confidence 664 89999999999999999999999875 2578999999999753 23
Q ss_pred HHHHHHHcCCC-cEEEecCCC--ChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 331 YEEKIRRLRLK-RVAFRTMWL--SAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 331 l~~~i~~l~l~-~V~f~g~~v--~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
++++.+++++. +|.|.| +. ++++++.+|++||++|.++ ..+++|++++||||||+|||+|+.+|
T Consensus 241 ~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~ad~~v~~s---~~Eg~g~~~lEA~a~G~Pvv~s~~~~ 307 (372)
T cd03792 241 YEEVLEYAEGDPDIHVLT-LPPVSDLEVNALQRASTVVLQKS---IREGFGLTVTEALWKGKPVIAGPVGG 307 (372)
T ss_pred HHHHHHHhCCCCCeEEEe-cCCCCHHHHHHHHHhCeEEEeCC---CccCCCHHHHHHHHcCCCEEEcCCCC
Confidence 55556567777 899997 54 8899999999999999753 35789999999999999999999876
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-25 Score=213.97 Aligned_cols=219 Identities=17% Similarity=0.147 Sum_probs=154.3
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHH---HhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeC-
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWA---SSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVT- 174 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la---~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS- 174 (414)
..+||+||++.............+ .+..++|+|++.|+.... ... ....++++.+.+.+|.++|+|
T Consensus 74 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~-------~~~---~~~~~~~~~~~~~~d~ii~~s~ 143 (366)
T cd03822 74 LSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLH-------EPR---PGDRALLRLLLRRADAVIVMSS 143 (366)
T ss_pred hcCCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCcc-------ccc---hhhhHHHHHHHhcCCEEEEeeH
Confidence 379999999873211111111122 233789999999997210 111 123455677779999999996
Q ss_pred HHHHHHHHHhhCCcEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeecccccccc
Q 015058 175 QAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL 253 (414)
Q Consensus 175 ~~~~~~l~~~~gi~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 253 (414)
+..++.+...+..++.+++|+ +...+.+.. .. . +. ..
T Consensus 144 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~---~-~~------------------------------------~~ 181 (366)
T cd03822 144 ELLRALLLRAYPEKIAVIPHGVPDPPAEPPE--SL---K-AL------------------------------------GG 181 (366)
T ss_pred HHHHHHHhhcCCCcEEEeCCCCcCcccCCch--hh---H-hh------------------------------------cC
Confidence 455544433222458999999 544443321 11 1 11 11
Q ss_pred CCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHH
Q 015058 254 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (414)
Q Consensus 254 ~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~ 333 (414)
.+++ ..++++|+++++||++.+++|++.+.++ .++++|+|+|+|+.......
T Consensus 182 ~~~~-~~i~~~G~~~~~K~~~~ll~a~~~~~~~---------------------------~~~~~l~i~G~~~~~~~~~~ 233 (366)
T cd03822 182 LDGR-PVLLTFGLLRPYKGLELLLEALPLLVAK---------------------------HPDVRLLVAGETHPDLERYR 233 (366)
T ss_pred CCCC-eEEEEEeeccCCCCHHHHHHHHHHHHhh---------------------------CCCeEEEEeccCccchhhhh
Confidence 2233 4899999999999999999999998763 57899999999876443332
Q ss_pred -----HHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 334 -----KIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 334 -----~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
+++++++. +|.|.|++++.+++..+|+.||++++|+... ..++|++++|||+||+|||++++++
T Consensus 234 ~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e-~~~~~~~~~Ea~a~G~PvI~~~~~~ 303 (366)
T cd03822 234 GEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYRSA-DQTQSGVLAYAIGFGKPVISTPVGH 303 (366)
T ss_pred hhhHhHHHhcCCCCcEEEecCcCCHHHHHHHHhhcCEEEeccccc-ccccchHHHHHHHcCCCEEecCCCC
Confidence 38899998 9999986799999999999999999774321 1389999999999999999999876
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-25 Score=214.94 Aligned_cols=218 Identities=19% Similarity=0.163 Sum_probs=164.7
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~ 179 (414)
.+||+||+++++.... +..++|+|+++|+..+.... ..........++++++.+.+.+|.++++|+.+++
T Consensus 84 ~~~Dii~~~~~~~~~~--------~~~~~~~i~~~hd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~ 153 (365)
T cd03809 84 LGLDLLHSPHNTAPLL--------RLRGVPVVVTIHDLIPLRFP--EYFSPGFRRYFRRLLRRALRRADAIITVSEATKR 153 (365)
T ss_pred cCCCeeeecccccCcc--------cCCCCCEEEEeccchhhhCc--ccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHH
Confidence 7999999998732211 55789999999987432110 0112223456677888889999999999999999
Q ss_pred HHHHhhCCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCC
Q 015058 180 ELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (414)
Q Consensus 180 ~l~~~~gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 255 (414)
.+.+.++.+ +.++||+ +...+.+.... . +.+.. ..+
T Consensus 154 ~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~--~--~~~~~------------------------------------~~~ 193 (365)
T cd03809 154 DLLRYLGVPPDKIVVIPLGVDPRFRPPPAEA--E--VLRAL------------------------------------YLL 193 (365)
T ss_pred HHHHHhCcCHHHEEeeccccCccccCCCchH--H--HHHHh------------------------------------cCC
Confidence 999887743 8999999 66666554321 1 21211 122
Q ss_pred CCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCC-hHHHHHH
Q 015058 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-KESYEEK 334 (414)
Q Consensus 256 ~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~-~e~l~~~ 334 (414)
++ ..++++|++.+.||++.+++|+..+.++ .++++|+|+|.|+. .+...+.
T Consensus 194 ~~-~~i~~~G~~~~~K~~~~~l~~~~~~~~~---------------------------~~~~~l~i~G~~~~~~~~~~~~ 245 (365)
T cd03809 194 PR-PYFLYVGTIEPRKNLERLLEAFARLPAK---------------------------GPDPKLVIVGKRGWLNEELLAR 245 (365)
T ss_pred CC-CeEEEeCCCccccCHHHHHHHHHHHHHh---------------------------cCCCCEEEecCCccccHHHHHH
Confidence 33 4899999999999999999999999863 45789999998754 3444445
Q ss_pred HHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 335 IRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 335 i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
++++++. +|.|+| +++.+++..+|++||+++.|+. .+++|.+++|||++|+|||++++++.
T Consensus 246 ~~~~~~~~~v~~~g-~~~~~~~~~~~~~~d~~l~ps~---~e~~~~~~~Ea~a~G~pvI~~~~~~~ 307 (365)
T cd03809 246 LRELGLGDRVRFLG-YVSDEELAALYRGARAFVFPSL---YEGFGLPVLEAMACGTPVIASNISSL 307 (365)
T ss_pred HHHcCCCCeEEECC-CCChhHHHHHHhhhhhhcccch---hccCCCCHHHHhcCCCcEEecCCCCc
Confidence 5678887 999997 9999999999999999997643 46789999999999999999998653
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-25 Score=215.66 Aligned_cols=194 Identities=8% Similarity=0.011 Sum_probs=149.0
Q ss_pred hcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHH
Q 015058 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (414)
Q Consensus 98 k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~ 177 (414)
+..+||+||+|.+. .... +++..+.|+|+++|+.... .... . .......+.++++|+..
T Consensus 84 ~~~~~Divh~~~~~---~~~~---~~~~~~~~~v~~~h~~~~~-------~~~~---~-----~~~~~~~~~~~~~s~~~ 142 (335)
T cd03802 84 AAGDFDIVHNHSLH---LPLP---FARPLPVPVVTTLHGPPDP-------ELLK---L-----YYAARPDVPFVSISDAQ 142 (335)
T ss_pred hcCCCCEEEecCcc---cchh---hhcccCCCEEEEecCCCCc-------ccch---H-----HHhhCcCCeEEEecHHH
Confidence 34789999999873 2222 4566789999999997531 1111 1 12236778999999999
Q ss_pred HHHHHHhhCCcEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCC
Q 015058 178 QHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN 256 (414)
Q Consensus 178 ~~~l~~~~gi~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 256 (414)
++.+... .++.+|||+ |.+.|++.. .+
T Consensus 143 ~~~~~~~--~~~~vi~ngvd~~~~~~~~--------------------------------------------------~~ 170 (335)
T cd03802 143 RRPWPPL--PWVATVHNGIDLDDYPFRG--------------------------------------------------PK 170 (335)
T ss_pred Hhhcccc--cccEEecCCcChhhCCCCC--------------------------------------------------CC
Confidence 8866543 458899999 766665421 12
Q ss_pred CCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHH
Q 015058 257 RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIR 336 (414)
Q Consensus 257 ~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~ 336 (414)
+ ..++++||+.++||++.+++|++. ++++|+|+|+|+..+.++..++
T Consensus 171 ~-~~i~~~Gr~~~~Kg~~~li~~~~~--------------------------------~~~~l~i~G~~~~~~~~~~~~~ 217 (335)
T cd03802 171 G-DYLLFLGRISPEKGPHLAIRAARR--------------------------------AGIPLKLAGPVSDPDYFYREIA 217 (335)
T ss_pred C-CEEEEEEeeccccCHHHHHHHHHh--------------------------------cCCeEEEEeCCCCHHHHHHHHH
Confidence 2 278999999999999999998653 3589999999998888888777
Q ss_pred HcC-CC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCcc
Q 015058 337 RLR-LK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSVV 400 (414)
Q Consensus 337 ~l~-l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~~ 400 (414)
+.. +. +|+|.| +++.++++.+|++||++|+++. ..+++|.+++||||||+|||+++++|..
T Consensus 218 ~~~~~~~~v~~~G-~~~~~~~~~~~~~~d~~v~ps~--~~E~~~~~~lEAma~G~PvI~~~~~~~~ 280 (335)
T cd03802 218 PELLDGPDIEYLG-EVGGAEKAELLGNARALLFPIL--WEEPFGLVMIEAMACGTPVIAFRRGAVP 280 (335)
T ss_pred HhcccCCcEEEeC-CCCHHHHHHHHHhCcEEEeCCc--ccCCcchHHHHHHhcCCCEEEeCCCCch
Confidence 765 44 999997 9999999999999999997632 3478899999999999999999987643
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-24 Score=236.02 Aligned_cols=317 Identities=13% Similarity=0.055 Sum_probs=195.7
Q ss_pred HHhhCCC----cEEEEecCCCCCC--------cccccCCCeEEEEeecCCCCCCC--CCCchHHHHHHHHHHHHHHHHHH
Q 015058 28 LARQMSL----EVDVVAYGGSKPH--------AAILEHPSIHIHTMTQWPTIPRG--LPKVLKPVLLLLKPLIQFFMLLW 93 (414)
Q Consensus 28 La~~~g~----eV~vv~~~~~~~~--------~~~~~~~~i~i~~v~~~~~~~~~--~~~~~~~~~~l~k~l~~~~~l~~ 93 (414)
|+++ || +|+|+|....... ..+...++++|.++| ..+... .++.. .-..++.++..|..-+.
T Consensus 300 La~~-G~~v~~~V~I~TR~~~~~~~~~~~~~~e~~~~~~~~~I~rvp--~g~~~~~~~~~~i-~k~~l~p~l~~f~~~~~ 375 (784)
T TIGR02470 300 IKLQ-GLEITPKILIVTRLIPDAEGTTCNQRLEKVYGTEHAWILRVP--FRTENGIILRNWI-SRFEIWPYLETFAEDAE 375 (784)
T ss_pred HHhc-CCCccceEEEEecCCCCccccccccccccccCCCceEEEEec--CCCCccccccccc-CHHHHHHHHHHHHHHHH
Confidence 4565 99 7779998743211 122234789999998 333211 11111 11223334444333222
Q ss_pred H-Hhhh-cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccC--CCcH--HHHHHHHH--HHHHhc
Q 015058 94 F-LCVK-IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLG--RRSH--FVSIYRWI--EKYYGK 165 (414)
Q Consensus 94 ~-l~~k-~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~--~~~~--~~~i~~~~--Ek~~~k 165 (414)
. +... ..+||+||+|.+ .++.+|.++++..|+|++.+.|.+..+-. ...+ .... ..++...+ |....+
T Consensus 376 ~~~~~~~~~~pDlIHahy~---d~glva~lla~~lgVP~v~t~HsL~~~K~-~~~g~~~~~~e~~~~~~~r~~ae~~~~~ 451 (784)
T TIGR02470 376 KEILAELQGKPDLIIGNYS---DGNLVASLLARKLGVTQCTIAHALEKTKY-PDSDIYWQEFEDKYHFSCQFTADLIAMN 451 (784)
T ss_pred HHHHHhcCCCCCEEEECCC---chHHHHHHHHHhcCCCEEEECCcchhhcc-cccccccccchhHHHhhhhhhHHHHHHh
Confidence 1 1111 257999999998 67778888899999999999998743211 0001 0100 11222112 567778
Q ss_pred cCCEEEEeCHHHHHH----HHHh-----------h----CC-----cEEEecCC-CCCCcCCCChHHHH--HHHHHhhhh
Q 015058 166 MANGCLCVTQAMQHE----LAQN-----------W----GI-----KATVLYDQ-PPEFFHPTSLEEKH--ELFCRLNKI 218 (414)
Q Consensus 166 ~ad~ii~vS~~~~~~----l~~~-----------~----gi-----~i~vI~n~-~~~~f~p~~~~~~~--~l~~~l~~~ 218 (414)
.||.|||.|...... +.+. + |+ ++.+||+| |++.|.|.+...++ .+......-
T Consensus 452 ~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~l 531 (784)
T TIGR02470 452 AADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEEL 531 (784)
T ss_pred cCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhh
Confidence 899999999765332 2211 1 22 26899999 88888887532211 111000000
Q ss_pred ccCCCCccccccCCCCCCCCccceeeecccccccc--CCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCC
Q 015058 219 LHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL--KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS 296 (414)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~ 296 (414)
.+ ..+..+.. +++ ++++| +|+++||++++||++.|++|+..+.+
T Consensus 532 l~--------------~~~~~~~~--------~G~l~d~~kp-iIl~VGRL~~~KGid~LIeA~~~l~~----------- 577 (784)
T TIGR02470 532 LF--------------SLEDNDEH--------YGYLKDPNKP-IIFSMARLDRVKNLTGLVECYGRSPK----------- 577 (784)
T ss_pred cc--------------chhhHHHH--------hCCCCCCCCc-EEEEEeCCCccCCHHHHHHHHHHhHh-----------
Confidence 00 00000000 122 45666 89999999999999999999987754
Q ss_pred chhhhhhhhhcCCccCCCCcEEEEEEcCCCC------------hHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHh---
Q 015058 297 TNEEVFLKEISDGKQYLYPRLLFIITGKGPD------------KESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLG--- 360 (414)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~------------~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~--- 360 (414)
..++++|+|+|+|+. .+++.++++++|+. +|+|+|...+.++.+.+|.
T Consensus 578 ----------------l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iA 641 (784)
T TIGR02470 578 ----------------LRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIA 641 (784)
T ss_pred ----------------hCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhh
Confidence 134689999998753 24667789999998 9999983236667666664
Q ss_pred -hccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC--------cccchhh
Q 015058 361 -SADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS--------VVGCLFV 405 (414)
Q Consensus 361 -~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~--------~~~~~~~ 405 (414)
++|+||+|+ ..|++|++++||||||+|||+|+++| ++|.++.
T Consensus 642 d~adVfV~PS---~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVd 692 (784)
T TIGR02470 642 DTKGIFVQPA---LYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHID 692 (784)
T ss_pred ccCcEEEECC---cccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeC
Confidence 357999873 35789999999999999999999876 4677764
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.9e-24 Score=206.13 Aligned_cols=201 Identities=14% Similarity=0.093 Sum_probs=147.9
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
..+||+||++++... ......+.+..++|+|+++|++.+. ..... ...+..|.++|+|+.++
T Consensus 94 ~~~~dii~~~~~~~~--~~~~~~~~~~~~~~~i~~~hd~~~~---------~~~~~-------~~~~~~d~ii~~s~~~~ 155 (359)
T cd03823 94 DFRPDVVHFHHLQGL--GVSILRAARDRGIPIVLTLHDYWLI---------CPRQG-------LFKKGGDAVIAPSRFLL 155 (359)
T ss_pred HcCCCEEEECCccch--HHHHHHHHHhcCCCEEEEEeeeeee---------cchhh-------hhccCCCEEEEeCHHHH
Confidence 479999999987221 2222233445679999999986320 00001 11123399999999999
Q ss_pred HHHHHhhC--CcEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCC
Q 015058 179 HELAQNWG--IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (414)
Q Consensus 179 ~~l~~~~g--i~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 255 (414)
+.+.+... .++.+++|+ |...+.+... ..+
T Consensus 156 ~~~~~~~~~~~~~~vi~n~~~~~~~~~~~~----------------------------------------------~~~- 188 (359)
T cd03823 156 DRYVANGLFAEKISVIRNGIDLDRAKRPRR----------------------------------------------APP- 188 (359)
T ss_pred HHHHHcCCCccceEEecCCcChhhcccccc----------------------------------------------CCC-
Confidence 99987643 248999999 6554433210 011
Q ss_pred CCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHH
Q 015058 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 335 (414)
Q Consensus 256 ~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i 335 (414)
+++..++++|++.+.||++.+++|++.+.+ ++++|+++|.|+..+..+...
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~-----------------------------~~~~l~i~G~~~~~~~~~~~~ 239 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDLLLEAFKRLPR-----------------------------GDIELVIVGNGLELEEESYEL 239 (359)
T ss_pred CCceEEEEEecCccccCHHHHHHHHHHHHh-----------------------------cCcEEEEEcCchhhhHHHHhh
Confidence 233589999999999999999999998763 479999999998877655443
Q ss_pred HHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 336 RRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 336 ~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
+.. +|+|+| +++.+++..+|++||++++|+. ..+++|++++|||+||+|||++++++.
T Consensus 240 ---~~~~~v~~~g-~~~~~~~~~~~~~ad~~i~ps~--~~e~~~~~~~Ea~a~G~Pvi~~~~~~~ 298 (359)
T cd03823 240 ---EGDPRVEFLG-AYPQEEIDDFYAEIDVLVVPSI--WPENFPLVIREALAAGVPVIASDIGGM 298 (359)
T ss_pred ---cCCCeEEEeC-CCCHHHHHHHHHhCCEEEEcCc--ccCCCChHHHHHHHCCCCEEECCCCCH
Confidence 444 999997 9999999999999999997632 357899999999999999999998763
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-24 Score=221.06 Aligned_cols=212 Identities=14% Similarity=0.095 Sum_probs=151.2
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHH-hhcCCeEEEEEcCcchhh-hhhc-cC--CCcHHH----HHHHHHHHHHhccCCE
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTL-LSLS-LG--RRSHFV----SIYRWIEKYYGKMANG 169 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~-~~~~~~~Iv~~H~~~~~l-~~~~-~~--~~~~~~----~i~~~~Ek~~~k~ad~ 169 (414)
..++|+||+++++. +.++. +..++|+|++.|+..... .... .. ..+++. +.+.++|+.+++.+|.
T Consensus 102 ~~~~D~v~~~~~~~------~~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ 175 (397)
T TIGR03087 102 AEPVDAIVVFSSAM------AQYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLRWIYRREGRLLLAYERAIAARFDA 175 (397)
T ss_pred hCCCCEEEEecccc------ceeccccccCCCeEeehhhHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHhhCCe
Confidence 37999999998621 12222 346889999999863211 1110 00 112221 3345789999999999
Q ss_pred EEEeCHHHHHHHHHhhCC---cEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeee
Q 015058 170 CLCVTQAMQHELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTS 245 (414)
Q Consensus 170 ii~vS~~~~~~l~~~~gi---~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (414)
++++|+..++.+.+..+. ++.+|||| |.+.|.|.... . .
T Consensus 176 vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~~~-~----~-------------------------------- 218 (397)
T TIGR03087 176 ATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRDY-P----N-------------------------------- 218 (397)
T ss_pred EEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCccc-c----C--------------------------------
Confidence 999999999999875432 38899999 77777664310 0 0
Q ss_pred ccccccccCCCCCeEEEEeccCCCCCChHHHHH----HHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEE
Q 015058 246 LAGIDVFLKPNRPALVVSSTSWTPDEDFGILLE----AALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII 321 (414)
Q Consensus 246 ~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~Lle----A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI 321 (414)
.+.++++ +++|+|++.+.||++.+++ ++..+++ ..|+++|+|
T Consensus 219 ------~~~~~~~-~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~---------------------------~~p~~~l~i 264 (397)
T TIGR03087 219 ------PYPPGKR-VLVFTGAMDYWPNIDAVVWFAERVFPAVRA---------------------------RRPAAEFYI 264 (397)
T ss_pred ------CCCCCCc-EEEEEEecCCccCHHHHHHHHHHHHHHHHH---------------------------HCCCcEEEE
Confidence 0122343 8999999999999999885 4444543 368999999
Q ss_pred EcCCCChHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 322 TGKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 322 ~G~G~~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
+|+|+.. + +++++.. +|+|.| +++ |++.+|++||++|+|+. .++|+|+|++||||||+|||+|+.+
T Consensus 265 vG~g~~~-~----~~~l~~~~~V~~~G-~v~--~~~~~~~~adv~v~Ps~--~~eG~~~~~lEAma~G~PVV~t~~~ 331 (397)
T TIGR03087 265 VGAKPSP-A----VRALAALPGVTVTG-SVA--DVRPYLAHAAVAVAPLR--IARGIQNKVLEAMAMAKPVVASPEA 331 (397)
T ss_pred ECCCChH-H----HHHhccCCCeEEee-ecC--CHHHHHHhCCEEEeccc--ccCCcccHHHHHHHcCCCEEecCcc
Confidence 9999863 2 3444544 899998 664 79999999999998742 3578999999999999999999863
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-24 Score=214.14 Aligned_cols=280 Identities=14% Similarity=0.122 Sum_probs=181.3
Q ss_pred EEEEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCCCCCcc-cccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHH
Q 015058 7 ACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAA-ILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPL 85 (414)
Q Consensus 7 ~~v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~-~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l 85 (414)
++++.-+ +...+|..+++.+|++. ..++++.+......... ......+....+. .. +....... .+
T Consensus 2 i~~~~~~-~~~~GG~E~~~~~l~~~-l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~----~~ 68 (351)
T cd03804 2 VAIVHDW-LVNIGGGEKVVEALARL-FPDADIFTLVDDPDKLPRLLRLKKIRTSFIQ--KL-----PFARRRYR----KY 68 (351)
T ss_pred EEEEEec-cccCCCHHHHHHHHHHh-CCCCCEEEEeecCCccchhhcCCceeechhh--hc-----hhhHhhHh----hh
Confidence 4455544 34568889999999997 66677776543221111 1111223332222 11 00111111 11
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcc---hhhh---hhccC--CC---cHHHH
Q 015058 86 IQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFG---YTLL---SLSLG--RR---SHFVS 154 (414)
Q Consensus 86 ~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~---~~l~---~~~~~--~~---~~~~~ 154 (414)
..++..++..+ +..+||+||+++++ ... .+....+.|.+..+|... +... ....+ .. ....+
T Consensus 69 ~~~~~~~~~~~-~~~~~D~v~~~~~~---~~~---~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (351)
T cd03804 69 LPLMPLAIEQF-DLSGYDLVISSSHA---VAK---GVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLH 141 (351)
T ss_pred CchhhHHHHhc-cccCCCEEEEcCcH---Hhc---cccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHH
Confidence 12222222222 34789999988651 111 111345778888888631 1100 00011 11 11234
Q ss_pred HHHHHHHHHhccCCEEEEeCHHHHHHHHHhhCCcEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCC
Q 015058 155 IYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGM 233 (414)
Q Consensus 155 i~~~~Ek~~~k~ad~ii~vS~~~~~~l~~~~gi~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 233 (414)
.++..|+...+.+|.++|+|+.+++.+.+.++.+..+++|+ |.+.|.+..
T Consensus 142 ~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~vi~~~~d~~~~~~~~----------------------------- 192 (351)
T cd03804 142 YLRIWDRRSAARVDYFIANSRFVARRIKKYYGRDATVIYPPVDTDRFTPAE----------------------------- 192 (351)
T ss_pred HHHHHHHHHhcCCCEEEECCHHHHHHHHHHhCCCcEEECCCCCHhhcCcCC-----------------------------
Confidence 55666777789999999999999999988878778899998 544443321
Q ss_pred CCCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCC
Q 015058 234 EGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYL 313 (414)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (414)
...+ .++++|++.+.||++.+++|++.+
T Consensus 193 ---------------------~~~~-~il~~G~~~~~K~~~~li~a~~~~------------------------------ 220 (351)
T cd03804 193 ---------------------EKED-YYLSVGRLVPYKRIDLAIEAFNKL------------------------------ 220 (351)
T ss_pred ---------------------CCCC-EEEEEEcCccccChHHHHHHHHHC------------------------------
Confidence 0122 688999999999999999999753
Q ss_pred CCcEEEEEEcCCCChHHHHHHHHHcCC-CcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEE
Q 015058 314 YPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLK 392 (414)
Q Consensus 314 ~p~i~liI~G~G~~~e~l~~~i~~l~l-~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi 392 (414)
| ++|+|+|+|++++++++ +. ++|+|+| ++++++++.+|++||++++++ . +++|.+++||||||+|||
T Consensus 221 -~-~~l~ivG~g~~~~~l~~-----~~~~~V~~~g-~~~~~~~~~~~~~ad~~v~ps---~-e~~g~~~~Eama~G~Pvi 288 (351)
T cd03804 221 -G-KRLVVIGDGPELDRLRA-----KAGPNVTFLG-RVSDEELRDLYARARAFLFPA---E-EDFGIVPVEAMASGTPVI 288 (351)
T ss_pred -C-CcEEEEECChhHHHHHh-----hcCCCEEEec-CCCHHHHHHHHHhCCEEEECC---c-CCCCchHHHHHHcCCCEE
Confidence 3 78999999998887776 33 4999997 999999999999999999763 3 678899999999999999
Q ss_pred EeeeCCc
Q 015058 393 LLWTCSV 399 (414)
Q Consensus 393 ~s~~~~~ 399 (414)
+++.+|.
T Consensus 289 ~~~~~~~ 295 (351)
T cd03804 289 AYGKGGA 295 (351)
T ss_pred EeCCCCC
Confidence 9987653
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.4e-24 Score=226.51 Aligned_cols=296 Identities=11% Similarity=0.024 Sum_probs=192.2
Q ss_pred CEEEEEEeCCCCCChHHH----HHHHHHHhhCCCcEEEEecCCCCC-----Cc-c-cc---------------c----CC
Q 015058 5 GRACVVVLGDLGRSPRMQ----YQALSLARQMSLEVDVVAYGGSKP-----HA-A-IL---------------E----HP 54 (414)
Q Consensus 5 ~~~~v~~~~d~~~~~r~~----~~a~~La~~~g~eV~vv~~~~~~~-----~~-~-~~---------------~----~~ 54 (414)
..+.|+..+.++...|.. ..|-.|++..+++|+++-+.-... ++ . .+ + .+
T Consensus 323 r~~~ivTtAslPWmTGtavnpL~rAayLa~~~~~~VtlviPWl~~~dq~~vy~~~~~F~~p~eQe~~ir~wl~~r~g~~~ 402 (794)
T PLN02501 323 RHVAIVTTASLPWMTGTAVNPLFRAAYLAKSAKQNVTLLVPWLCKSDQELVYPNNLTFSSPEEQESYIRNWLEERIGFKA 402 (794)
T ss_pred CeEEEEEcccCcccccccccHHHHHHHhcccCCceEEEEEecCCccccccccCCCcccCCHHHHHHHHHHHHHHhcCCCC
Confidence 468999999887554433 467778875578999986652210 01 0 00 0 13
Q ss_pred CeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHH--HHHHHhhcCCeEEE
Q 015058 55 SIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVA--VKWASSLRRSAFIV 132 (414)
Q Consensus 55 ~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~--~~la~~~~~~~~Iv 132 (414)
+..|...|++.- ..... ..++-.+.+.+. ..+|||||+++|..+ +++ |..+++..+ |+|.
T Consensus 403 ~~~i~fYpg~~~--~~~~S-I~p~gdI~~~L~------------~f~PDVVHLatP~~L--Gw~~~Glr~ArKl~-PVVa 464 (794)
T PLN02501 403 DFKISFYPGKFS--KERRS-IIPAGDTSQFIP------------SKDADIAILEEPEHL--NWYHHGKRWTDKFN-HVVG 464 (794)
T ss_pred CceEEeecchhc--cCCcc-ccchHHHHHHhh------------ccCCCEEEECCchhh--ccHHHHHHHHHHcC-CeEE
Confidence 444544442211 11111 112222222222 369999999998432 233 444444456 8888
Q ss_pred EEcCcchhhhhhccCCCcHHHH-HHHHHHHHHhcc-CCEEEEeCHHHHHHHHHhhCCcEEEecCC-CCCCcCCCChHHHH
Q 015058 133 DWHNFGYTLLSLSLGRRSHFVS-IYRWIEKYYGKM-ANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKH 209 (414)
Q Consensus 133 ~~H~~~~~l~~~~~~~~~~~~~-i~~~~Ek~~~k~-ad~ii~vS~~~~~~l~~~~gi~i~vI~n~-~~~~f~p~~~~~~~ 209 (414)
++|-....... .+ ...++.. +.+++++|+.+. ||.++|+|..+++ +... + +..+ || |+++|+|....
T Consensus 465 syHTny~eYl~-~y-~~g~L~~~llk~l~~~v~r~hcD~VIaPS~atq~-L~~~-v--I~nV-nGVDte~F~P~~r~--- 534 (794)
T PLN02501 465 VVHTNYLEYIK-RE-KNGALQAFFVKHINNWVTRAYCHKVLRLSAATQD-LPKS-V--ICNV-HGVNPKFLKIGEKV--- 534 (794)
T ss_pred EEeCCcHHHHh-Hh-cchhHHHHHHHHHHHHHHHhhCCEEEcCCHHHHH-hccc-c--eeec-ccccccccCCcchh---
Confidence 88865322111 12 1233333 233445555433 8999999988884 4221 2 2222 57 89999987532
Q ss_pred HHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhh
Q 015058 210 ELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAA 289 (414)
Q Consensus 210 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~ 289 (414)
..+++++ ++... ..++|+||+.++||++.||+|++.+.+
T Consensus 535 ~~~r~lg------------------------------------i~~~~-kgiLfVGRLa~EKGld~LLeAla~L~~---- 573 (794)
T PLN02501 535 AEERELG------------------------------------QQAFS-KGAYFLGKMVWAKGYRELIDLLAKHKN---- 573 (794)
T ss_pred HHHHhcC------------------------------------Ccccc-CceEEEEcccccCCHHHHHHHHHHHHh----
Confidence 1112222 22222 257899999999999999999998875
Q ss_pred hhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeec
Q 015058 290 ILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLH 369 (414)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~ 369 (414)
..|+++|+|+|+||++++++++++++++ +|.|+| ..++.+.+|+++|+||+|+
T Consensus 574 -----------------------~~pnvrLvIVGDGP~reeLe~la~eLgL-~V~FLG---~~dd~~~lyasaDVFVlPS 626 (794)
T PLN02501 574 -----------------------ELDGFNLDVFGNGEDAHEVQRAAKRLDL-NLNFLK---GRDHADDSLHGYKVFINPS 626 (794)
T ss_pred -----------------------hCCCeEEEEEcCCccHHHHHHHHHHcCC-EEEecC---CCCCHHHHHHhCCEEEECC
Confidence 2578999999999999999999999988 499998 5777889999999999874
Q ss_pred cCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 370 TSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 370 ~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
. .|+||++++||||||+|||+++.+|.
T Consensus 627 ~---sEgFGlVlLEAMA~GlPVVATd~pG~ 653 (794)
T PLN02501 627 I---SDVLCTATAEALAMGKFVVCADHPSN 653 (794)
T ss_pred C---cccchHHHHHHHHcCCCEEEecCCCC
Confidence 3 47899999999999999999998764
|
|
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.2e-24 Score=233.25 Aligned_cols=321 Identities=12% Similarity=0.048 Sum_probs=198.3
Q ss_pred HHHHhhCCCcEE----EEecCCCCCC--------cccccCCCeEEEEeecCCCCCC-CCCCchHHHHHHHHHHHHHHHHH
Q 015058 26 LSLARQMSLEVD----VVAYGGSKPH--------AAILEHPSIHIHTMTQWPTIPR-GLPKVLKPVLLLLKPLIQFFMLL 92 (414)
Q Consensus 26 ~~La~~~g~eV~----vv~~~~~~~~--------~~~~~~~~i~i~~v~~~~~~~~-~~~~~~~~~~~l~k~l~~~~~l~ 92 (414)
..|+++ ||+|+ |+|..-.... ..+...++++|.++| ..+.. ..++.. .-..++.++..|..-+
T Consensus 322 ~~l~~~-G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~~~~I~rvP--~g~~~~~l~~~i-~ke~l~p~L~~f~~~~ 397 (815)
T PLN00142 322 LRIKQQ-GLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVP--FRTEKGILRKWI-SRFDVWPYLETFAEDA 397 (815)
T ss_pred HHHHhc-CCCccceeEEEEeccCCccCCcccCcceeccCCCceEEEecC--CCCCcccccccc-CHHHHHHHHHHHHHHH
Confidence 566775 99874 8887532210 122224589999998 43321 111111 1122334444433322
Q ss_pred H-HHhh-hcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhh---hccCCCcHHHHHH--HHHHHHHhc
Q 015058 93 W-FLCV-KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLS---LSLGRRSHFVSIY--RWIEKYYGK 165 (414)
Q Consensus 93 ~-~l~~-k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~---~~~~~~~~~~~i~--~~~Ek~~~k 165 (414)
. .+.. ...+||+||+|.+ .++.+|..+++..|+|++.+.|...-+-.. ..+......+++. ...|+....
T Consensus 398 ~~~~~~~~~~~PDlIHaHYw---dsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~ 474 (815)
T PLN00142 398 ASEILAELQGKPDLIIGNYS---DGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMN 474 (815)
T ss_pred HHHHHHhcCCCCCEEEECCc---cHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHH
Confidence 1 1211 1257999999988 677888888888999999999977422110 0000001112222 234788888
Q ss_pred cCCEEEEeCHHHHHHH----H---Hh------------hCC-----cEEEecCC-CCCCcCCCChHHHHHHHHHhhhhcc
Q 015058 166 MANGCLCVTQAMQHEL----A---QN------------WGI-----KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILH 220 (414)
Q Consensus 166 ~ad~ii~vS~~~~~~l----~---~~------------~gi-----~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~ 220 (414)
.||.||+.|.+.+..+ . .+ .|+ ++.+|++| |...|.|....++ .+. .+.
T Consensus 475 ~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~-rl~-~l~---- 548 (815)
T PLN00142 475 HADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQK-RLT-SLH---- 548 (815)
T ss_pred hhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHh-hHH-hhc----
Confidence 9999999998776422 1 10 133 36889999 8888888653211 110 100
Q ss_pred CCCCccccccCCCCCCCCccceeeec-ccccccc--CCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCc
Q 015058 221 QPLGVQDCVSNGMEGQKADETIFTSL-AGIDVFL--KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 297 (414)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l--~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~ 297 (414)
|+.+. .+|.-. ....+++ ++++| +|+++||+.++||++.||+|+..+.+
T Consensus 549 ----------n~I~~-----~l~~~~~~~e~lg~l~~~~kp-vIl~VGRL~~~KGid~LIeA~a~l~~------------ 600 (815)
T PLN00142 549 ----------PSIEE-----LLYSPEQNDEHIGYLKDRKKP-IIFSMARLDRVKNLTGLVEWYGKNKR------------ 600 (815)
T ss_pred ----------ccchh-----hcCChHHHHHHhCCccCCCCc-EEEEEecCcccCCHHHHHHHHHHHHH------------
Confidence 11110 000000 0001122 34555 89999999999999999999998765
Q ss_pred hhhhhhhhhcCCccCCCCcEEEEEEcCCC------Ch------HHHHHHHHHcCCC-cEEEecC---CCChhhHHHHHh-
Q 015058 298 NEEVFLKEISDGKQYLYPRLLFIITGKGP------DK------ESYEEKIRRLRLK-RVAFRTM---WLSAEDYPLLLG- 360 (414)
Q Consensus 298 ~~~~~~~~~~~~~~~~~p~i~liI~G~G~------~~------e~l~~~i~~l~l~-~V~f~g~---~v~~ed~~~~l~- 360 (414)
..++++|+|+|+|+ +. ++++++++++++. +|+|+|. .++.+++..+++
T Consensus 601 ---------------l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iad 665 (815)
T PLN00142 601 ---------------LRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIAD 665 (815)
T ss_pred ---------------hCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHh
Confidence 24579999999882 11 3477789999998 9999872 233456777776
Q ss_pred hccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC--------cccchhh
Q 015058 361 SADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS--------VVGCLFV 405 (414)
Q Consensus 361 ~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~--------~~~~~~~ 405 (414)
++|+||+|+ ..|+||++++||||||+|||+|+++| ++|.++.
T Consensus 666 aaDVfVlPS---~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~ 715 (815)
T PLN00142 666 TKGAFVQPA---LYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHID 715 (815)
T ss_pred hCCEEEeCC---cccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeC
Confidence 579999763 35789999999999999999999876 4677764
|
|
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.7e-25 Score=217.51 Aligned_cols=297 Identities=12% Similarity=0.056 Sum_probs=202.3
Q ss_pred EEEEeCCCCCChHHHHHHHHHHhh---CCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHH
Q 015058 8 CVVVLGDLGRSPRMQYQALSLARQ---MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKP 84 (414)
Q Consensus 8 ~v~~~~d~~~~~r~~~~a~~La~~---~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~ 84 (414)
+++.-.=|+..+++..+...|++. +||.|.+++..-.....-....++.+++++|-... .+ -.-.+..+
T Consensus 4 ~mVsdff~P~~ggveshiy~lSq~li~lghkVvvithayg~r~girylt~glkVyylp~~v~-~n-~tT~ptv~------ 75 (426)
T KOG1111|consen 4 LMVSDFFYPSTGGVESHIYALSQCLIRLGHKVVVITHAYGNRVGIRYLTNGLKVYYLPAVVG-YN-QTTFPTVF------ 75 (426)
T ss_pred eeeCcccccCCCChhhhHHHhhcchhhcCCeEEEEeccccCccceeeecCCceEEEEeeeee-ec-ccchhhhh------
Confidence 334333334556666555555443 69999999855322111122346799999882111 11 00011111
Q ss_pred HHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHh
Q 015058 85 LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYG 164 (414)
Q Consensus 85 l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~ 164 (414)
..+-++...+. .++..+||-|++.+..+- =+.+.++..|.+.++|=|.+.. +.. .-......+-++..
T Consensus 76 --~~~Pllr~i~l-rE~I~ivhghs~fS~lah-e~l~hartMGlktVfTdHSlfG------fad--~~si~~n~ll~~sL 143 (426)
T KOG1111|consen 76 --SDFPLLRPILL-RERIEIVHGHSPFSYLAH-EALMHARTMGLKTVFTDHSLFG------FAD--IGSILTNKLLPLSL 143 (426)
T ss_pred --ccCcccchhhh-hhceEEEecCChHHHHHH-HHHHHHHhcCceEEEecccccc------ccc--hhhhhhcceeeeee
Confidence 11111111111 269999999988432221 1455667789999998888521 111 10111122234555
Q ss_pred ccCCEEEEeCHHHHHHHHHhhCCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCcc
Q 015058 165 KMANGCLCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240 (414)
Q Consensus 165 k~ad~ii~vS~~~~~~l~~~~gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (414)
...|.+||+|...++...-+..++ +.+|||. +.+.|.|.+.+ +
T Consensus 144 ~~id~~IcVshtskentvlr~~L~p~kvsvIPnAv~~~~f~P~~~~-~-------------------------------- 190 (426)
T KOG1111|consen 144 ANIDRIICVSHTSKENTVLRGALAPAKVSVIPNAVVTHTFTPDAAD-K-------------------------------- 190 (426)
T ss_pred cCCCcEEEEeecCCCceEEEeccCHhHeeeccceeeccccccCccc-c--------------------------------
Confidence 788999999999888644332333 8899999 88889886521 1
Q ss_pred ceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEE
Q 015058 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI 320 (414)
Q Consensus 241 ~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~li 320 (414)
+.+..+.++.++|+-.+||+|.|+++...+.+ ++|+++|+
T Consensus 191 -------------~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~---------------------------~~p~vrfi 230 (426)
T KOG1111|consen 191 -------------PSADIITIVVASRLVYRKGIDLLLEIIPSVCD---------------------------KHPEVRFI 230 (426)
T ss_pred -------------CCCCeeEEEEEeeeeeccchHHHHHHHHHHHh---------------------------cCCCeeEE
Confidence 11112578999999999999999999999886 58999999
Q ss_pred EEcCCCChHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 321 ITGKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 321 I~G~G~~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
|+||||.+..|||..+++.++ +|.++| -++++++.+.|.+.|+|+.+ |..|.|.+.++||++||+|||++.++|.
T Consensus 231 i~GDGPk~i~lee~lEk~~l~~rV~~lG-~v~h~~Vr~vl~~G~IFlnt---SlTEafc~~ivEAaScGL~VVsTrVGGI 306 (426)
T KOG1111|consen 231 IIGDGPKRIDLEEMLEKLFLQDRVVMLG-TVPHDRVRDVLVRGDIFLNT---SLTEAFCMVIVEAASCGLPVVSTRVGGI 306 (426)
T ss_pred EecCCcccchHHHHHHHhhccCceEEec-ccchHHHHHHHhcCcEEecc---HHHHHHHHHHHHHHhCCCEEEEeecCCc
Confidence 999999999999999999999 999998 99999999999999999954 3357899999999999999999999996
Q ss_pred cc
Q 015058 400 VG 401 (414)
Q Consensus 400 ~~ 401 (414)
--
T Consensus 307 pe 308 (426)
T KOG1111|consen 307 PE 308 (426)
T ss_pred cc
Confidence 43
|
|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-23 Score=217.13 Aligned_cols=171 Identities=16% Similarity=0.233 Sum_probs=134.2
Q ss_pred HHHHHHHHHHhccCCEEEEeCHHHHHHHHHhhCCc--EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCcccccc
Q 015058 154 SIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIK--ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVS 230 (414)
Q Consensus 154 ~i~~~~Ek~~~k~ad~ii~vS~~~~~~l~~~~gi~--i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 230 (414)
+.+.+++++..+.||.++|+|+..++.+.+.|+.+ +.++||+ +.+.|.+.+.
T Consensus 208 ~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~~~~~~~i~vvyp~vd~~~~~~~~~------------------------- 262 (463)
T PLN02949 208 RAFAWMYGLVGRCAHLAMVNSSWTKSHIEALWRIPERIKRVYPPCDTSGLQALPL------------------------- 262 (463)
T ss_pred HHHHHHHHHHcCCCCEEEECCHHHHHHHHHHcCCCCCeEEEcCCCCHHHcccCCc-------------------------
Confidence 33444667777999999999999999998877653 7889988 5433321110
Q ss_pred CCCCCCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCc
Q 015058 231 NGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGK 310 (414)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (414)
.-+++++ .++++||+.++||++.+|+|+..+.++. .+
T Consensus 263 ---------------------~~~~~~~-~il~vGR~~~~Kg~~llI~A~~~l~~~~-------------------~~-- 299 (463)
T PLN02949 263 ---------------------ERSEDPP-YIISVAQFRPEKAHALQLEAFALALEKL-------------------DA-- 299 (463)
T ss_pred ---------------------cccCCCC-EEEEEEeeeccCCHHHHHHHHHHHHHhc-------------------cc--
Confidence 0011233 7889999999999999999999876521 00
Q ss_pred cCCCCcEEEEEEcCCCC------hHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHH
Q 015058 311 QYLYPRLLFIITGKGPD------KESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCY 383 (414)
Q Consensus 311 ~~~~p~i~liI~G~G~~------~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~E 383 (414)
..|+++|+|+|+|+. .+++++++++++++ +|+|+| +++.++++.+|+.||++|.+ +..|+||++++|
T Consensus 300 --~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g-~v~~~el~~ll~~a~~~v~~---s~~E~FGivvlE 373 (463)
T PLN02949 300 --DVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHK-NVSYRDLVRLLGGAVAGLHS---MIDEHFGISVVE 373 (463)
T ss_pred --cCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeC-CCCHHHHHHHHHhCcEEEeC---CccCCCChHHHH
Confidence 247899999999853 25788999999998 999997 99999999999999999953 346889999999
Q ss_pred HHHcCCeEEEeeeCC
Q 015058 384 CWYSRYSLKLLWTCS 398 (414)
Q Consensus 384 ama~G~Pvi~s~~~~ 398 (414)
|||||+|||+++.+|
T Consensus 374 AMA~G~PVIa~~~gG 388 (463)
T PLN02949 374 YMAAGAVPIAHNSAG 388 (463)
T ss_pred HHHcCCcEEEeCCCC
Confidence 999999999999876
|
|
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.3e-23 Score=202.66 Aligned_cols=222 Identities=14% Similarity=0.107 Sum_probs=152.8
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhh-cCCeEEEEEcCcchhhhhhcc-----------------CC-C--cHHHHHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSL-----------------GR-R--SHFVSIYRW 158 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~-~~~~~Iv~~H~~~~~l~~~~~-----------------~~-~--~~~~~i~~~ 158 (414)
.+||+||+|.+... .+...++.+. .++|+|++.|++......... .. . .......++
T Consensus 50 ~~~diih~~~~~~~--~~~~~~~~~~~~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (365)
T cd03825 50 INADIVHLHWIHGG--FLSIEDLSKLLDRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRR 127 (365)
T ss_pred ccCCEEEEEccccC--ccCHHHHHHHHcCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHH
Confidence 79999999985322 1111222332 489999999986211000000 00 0 122333344
Q ss_pred HHHHHhccCCEEEEeCHHHHHHHHHhhCC---cEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCC
Q 015058 159 IEKYYGKMANGCLCVTQAMQHELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGME 234 (414)
Q Consensus 159 ~Ek~~~k~ad~ii~vS~~~~~~l~~~~gi---~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 234 (414)
..+.+.+.++.++++|+.+++.+.+.+.. ++.++||+ +.+.|.|.+. ...+.++
T Consensus 128 ~~~~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~---~~~~~~~------------------- 185 (365)
T cd03825 128 KRKAWADLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPRDK---REARKRL------------------- 185 (365)
T ss_pred HHHHhccCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCCCcH---HHHHHHh-------------------
Confidence 44445467889999999999998876433 48999999 7777766642 2333332
Q ss_pred CCCCccceeeeccccccccCCCCCeEEEEeccCCC--CCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccC
Q 015058 235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTP--DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQY 312 (414)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~--~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (414)
+++++++ +++++|+... .||++.+++|++.+.++
T Consensus 186 -----------------~~~~~~~-~i~~~~~~~~~~~K~~~~ll~a~~~l~~~-------------------------- 221 (365)
T cd03825 186 -----------------GLPADKK-IILFGAVGGTDPRKGFDELIEALKRLAER-------------------------- 221 (365)
T ss_pred -----------------CCCCCCe-EEEEEecCCCccccCHHHHHHHHHHhhhc--------------------------
Confidence 2344443 6666666655 89999999999988751
Q ss_pred CCCcEEEEEEcCCCChHHHHHHHHHcCCC-cEEEecCCCC-hhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCe
Q 015058 313 LYPRLLFIITGKGPDKESYEEKIRRLRLK-RVAFRTMWLS-AEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYS 390 (414)
Q Consensus 313 ~~p~i~liI~G~G~~~e~l~~~i~~l~l~-~V~f~g~~v~-~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~P 390 (414)
..++++++++|+|+..+.. +++ +|.|+| +++ .++++.+|++||++++++ ..+++|.+++|||+||+|
T Consensus 222 ~~~~~~~~i~G~~~~~~~~-------~~~~~v~~~g-~~~~~~~~~~~~~~ad~~l~ps---~~e~~g~~~~Eam~~g~P 290 (365)
T cd03825 222 WKDDIELVVFGASDPEIPP-------DLPFPVHYLG-SLNDDESLALIYSAADVFVVPS---LQENFPNTAIEALACGTP 290 (365)
T ss_pred cCCCeEEEEeCCCchhhhc-------cCCCceEecC-CcCCHHHHHHHHHhCCEEEecc---ccccccHHHHHHHhcCCC
Confidence 1478999999999865431 455 899997 888 889999999999999763 357899999999999999
Q ss_pred EEEeeeCCcc
Q 015058 391 LKLLWTCSVV 400 (414)
Q Consensus 391 vi~s~~~~~~ 400 (414)
||+++++|..
T Consensus 291 vI~~~~~~~~ 300 (365)
T cd03825 291 VVAFDVGGIP 300 (365)
T ss_pred EEEecCCCCh
Confidence 9999987754
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.9e-23 Score=211.09 Aligned_cols=210 Identities=15% Similarity=0.116 Sum_probs=154.5
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhhcCC-eEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRS-AFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~~~~-~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
.++|++|.+-. .+...++.++++..+. ++|++.|++.... ... ...+..+.+++.+.+|.++|+|+.++
T Consensus 126 ~~~~v~~sy~~--~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~-----~~~---~~~~~~~~~~~~~~~d~ii~~S~~~~ 195 (407)
T cd04946 126 GQGTVFYSYWL--HETAYALALLKKEYLRKRVISRAHGYDLYE-----DRY---PSGYIPLRRYLLSSLDAVFPCSEQGR 195 (407)
T ss_pred cCceEEEEecC--chHHHHHHHHHHhcCCceEEEEeccchhhh-----hhc---cccchHHHHHHHhcCCEEEECCHHHH
Confidence 45567666533 2333333334444444 5899999864210 000 11122344566789999999999999
Q ss_pred HHHHHhhCCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccC
Q 015058 179 HELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (414)
Q Consensus 179 ~~l~~~~gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 254 (414)
+++.+.++.. +.++||| +.+.+.+.. .
T Consensus 196 ~~l~~~~~~~~~ki~vi~~gv~~~~~~~~~-------------------------------------------------~ 226 (407)
T cd04946 196 NYLQKRYPAYKEKIKVSYLGVSDPGIISKP-------------------------------------------------S 226 (407)
T ss_pred HHHHHHCCCccccEEEEECCcccccccCCC-------------------------------------------------C
Confidence 9999887754 7889999 433332110 0
Q ss_pred CCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCC--cEEEEEEcCCCChHHHH
Q 015058 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP--RLLFIITGKGPDKESYE 332 (414)
Q Consensus 255 ~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~i~liI~G~G~~~e~l~ 332 (414)
.++++.++++|++.+.||++.+++|+..+.++ .| ++.++++|+|++.+.++
T Consensus 227 ~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~---------------------------~p~~~l~~~iiG~g~~~~~l~ 279 (407)
T cd04946 227 KDDTLRIVSCSYLVPVKRVDLIIKALAALAKA---------------------------RPSIKIKWTHIGGGPLEDTLK 279 (407)
T ss_pred CCCCEEEEEeeccccccCHHHHHHHHHHHHHh---------------------------CCCceEEEEEEeCchHHHHHH
Confidence 12235899999999999999999999999863 33 57889999999999999
Q ss_pred HHHHHcCCC-cEEEecCCCChhhHHHHHhh--ccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 333 EKIRRLRLK-RVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 333 ~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~--aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
+++++++.. +|+|+| +++.+|+..+|+. ||++|.++ ..+|+|.+++||||||+|||+|+++|.
T Consensus 280 ~~~~~~~~~~~V~f~G-~v~~~e~~~~~~~~~~~v~v~~S---~~Eg~p~~llEAma~G~PVIas~vgg~ 345 (407)
T cd04946 280 ELAESKPENISVNFTG-ELSNSEVYKLYKENPVDVFVNLS---ESEGLPVSIMEAMSFGIPVIATNVGGT 345 (407)
T ss_pred HHHHhcCCCceEEEec-CCChHHHHHHHhhcCCCEEEeCC---ccccccHHHHHHHHcCCCEEeCCCCCc
Confidence 999988888 999997 9999999999976 67777543 357899999999999999999998765
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.3e-22 Score=204.84 Aligned_cols=297 Identities=10% Similarity=0.024 Sum_probs=176.2
Q ss_pred CCEEEEEEeCCCCCChHHHH-HHHHHHhhCCCcEEEEecCCCCCCcccccCCCe-EEEEeecCCCCCCCCCCchHHHHHH
Q 015058 4 RGRACVVVLGDLGRSPRMQY-QALSLARQMSLEVDVVAYGGSKPHAAILEHPSI-HIHTMTQWPTIPRGLPKVLKPVLLL 81 (414)
Q Consensus 4 ~~~~~v~~~~d~~~~~r~~~-~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i-~i~~v~~~~~~~~~~~~~~~~~~~l 81 (414)
||.+.|.+...+|+.+|+-. .+..+.++ ||+|+++...+..+.... ...++ .++... ++ ....+..+
T Consensus 1 mkil~i~~~l~~GGaeri~~~L~~~l~~~-G~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~--~~-------~~~~~~~~ 69 (405)
T PRK10125 1 MNILQFNVRLAEGGAAGVALDLHQRALQQ-GLASHFVYGYGKGGKESV-SHQNYPQVIKHT--PR-------MTAMANIA 69 (405)
T ss_pred CeEEEEEeeecCCchhHHHHHHHHHHHhc-CCeEEEEEecCCCccccc-ccCCcceEEEec--cc-------HHHHHHHH
Confidence 47788887777777777654 45666665 999999887654432211 12222 222222 11 11111110
Q ss_pred ------HHHHHHHHHHHHHHhhhcCCCcEEEEeCCCCch-HH-HHHHH---H-HhhcCCeEEEEEcCcc-hh--------
Q 015058 82 ------LKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVP-TL-VAVKW---A-SSLRRSAFIVDWHNFG-YT-------- 140 (414)
Q Consensus 82 ------~k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~-~~-~~~~l---a-~~~~~~~~Iv~~H~~~-~~-------- 140 (414)
...+.. ..-..++..+..+|||||.|+.-... .. .+..+ + .+..++|+|.|.|+.- .+
T Consensus 70 ~~~~~~~~~~~~-~~~~~~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~ 148 (405)
T PRK10125 70 LFRLFNRDLFGN-FNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDG 148 (405)
T ss_pred HHHhcchhhcch-HHHHHHHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcc
Confidence 000011 11111122235799999999752211 11 11211 1 1234789999999862 11
Q ss_pred ---hh-h------hc-cCC--CcHHHHHHHHHHHHH---hccCCEEEEeCHHHHHHHHHhhCCc-EEEecCC-CCCCcCC
Q 015058 141 ---LL-S------LS-LGR--RSHFVSIYRWIEKYY---GKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHP 202 (414)
Q Consensus 141 ---l~-~------~~-~~~--~~~~~~i~~~~Ek~~---~k~ad~ii~vS~~~~~~l~~~~gi~-i~vI~n~-~~~~f~p 202 (414)
.. . +. +.. .....+.+..-.+.+ .+.++.++++|+.+++.+.+.++.. +.+|||| |++.+.+
T Consensus 149 C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~~~~~~i~vI~NGid~~~~~~ 228 (405)
T PRK10125 149 CEGWKTGCQKCPTLNNYPPVKVDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEAI 228 (405)
T ss_pred cccccccCCCCCCccCCCCCccchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHHcCCCCEEEeCCCcCcccccc
Confidence 00 0 00 000 001111111112222 3457899999999999988766644 8999999 6543332
Q ss_pred CChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeEEEEeccC--CCCCChHHHHHHH
Q 015058 203 TSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSW--TPDEDFGILLEAA 280 (414)
Q Consensus 203 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl--~~~Kg~~~LleA~ 280 (414)
.+. .... ..+++++ +++++|+. .+.||++.|++|+
T Consensus 229 ~~~--~~~~----------------------------------------~~~~~~~-~il~v~~~~~~~~Kg~~~li~A~ 265 (405)
T PRK10125 229 LAE--LPPV----------------------------------------RETQGKP-KIAVVAHDLRYDGKTDQQLVREM 265 (405)
T ss_pred ccc--cccc----------------------------------------ccCCCCC-EEEEEEeccccCCccHHHHHHHH
Confidence 210 0000 0122343 78888983 4789999999999
Q ss_pred HHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHHHcCCCcEEEecCCC-ChhhHHHHH
Q 015058 281 LMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWL-SAEDYPLLL 359 (414)
Q Consensus 281 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~l~l~~V~f~g~~v-~~ed~~~~l 359 (414)
..+. ++++|+|+|+|+... ..+|.++| +. +.+++..+|
T Consensus 266 ~~l~------------------------------~~~~L~ivG~g~~~~----------~~~v~~~g-~~~~~~~l~~~y 304 (405)
T PRK10125 266 MALG------------------------------DKIELHTFGKFSPFT----------AGNVVNHG-FETDKRKLMSAL 304 (405)
T ss_pred HhCC------------------------------CCeEEEEEcCCCccc----------ccceEEec-CcCCHHHHHHHH
Confidence 8753 368999999986532 13688887 54 668999999
Q ss_pred hhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 360 GSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 360 ~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
++||+||+|+ ..|++|++++||||||+|||+|+++|.
T Consensus 305 ~~aDvfV~pS---~~Egfp~vilEAmA~G~PVVat~~gG~ 341 (405)
T PRK10125 305 NQMDALVFSS---RVDNYPLILCEALSIGVPVIATHSDAA 341 (405)
T ss_pred HhCCEEEECC---ccccCcCHHHHHHHcCCCEEEeCCCCh
Confidence 9999999763 368999999999999999999999883
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.8e-23 Score=215.13 Aligned_cols=215 Identities=11% Similarity=0.133 Sum_probs=157.5
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcH-HHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSH-FVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~-~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
.++||+|+..++. ...+ ++.....+|+++.+|+..+.-. ....... +...+.+.-+ ..+.+|.+|++|+..+
T Consensus 210 ~~~di~i~dr~~~---~~~~-~~~~~~~~~~v~~lH~~h~~~~--~~~~~~~~~~~~y~~~~~-~~~~~D~iI~~S~~~~ 282 (500)
T TIGR02918 210 TKKDIIILDRSTG---IGQA-VLENKGPAKLGVVVHAEHFSES--ATNETYILWNNYYEYQFS-NADYIDFFITATDIQN 282 (500)
T ss_pred CCCCEEEEcCCcc---cchH-HHhcCCCceEEEEEChhhhcCc--cCcchhHHHHHHHHHHHh-chhhCCEEEECCHHHH
Confidence 6899999998742 1112 3344557899999998543110 0111111 2222222111 2367899999999999
Q ss_pred HHHHHhhC------CcEEEecCCC-CCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeecccccc
Q 015058 179 HELAQNWG------IKATVLYDQP-PEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDV 251 (414)
Q Consensus 179 ~~l~~~~g------i~i~vI~n~~-~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (414)
+.+.+.++ .++.+||||. ...+.|..
T Consensus 283 ~~l~~~~~~~~~~~~ki~viP~g~~~~~~~~~~----------------------------------------------- 315 (500)
T TIGR02918 283 QILKNQFKKYYNIEPRIYTIPVGSLDELQYPEQ----------------------------------------------- 315 (500)
T ss_pred HHHHHHhhhhcCCCCcEEEEcCCCcccccCccc-----------------------------------------------
Confidence 88887653 1278999993 22222210
Q ss_pred ccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHH
Q 015058 252 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 331 (414)
Q Consensus 252 ~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l 331 (414)
..++..|+++||+.++||++.||+|+..+.+ ..|+++|.|+|+|++++++
T Consensus 316 ---~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~---------------------------~~p~~~l~i~G~G~~~~~l 365 (500)
T TIGR02918 316 ---ERKPFSIITASRLAKEKHIDWLVKAVVKAKK---------------------------SVPELTFDIYGEGGEKQKL 365 (500)
T ss_pred ---ccCCeEEEEEeccccccCHHHHHHHHHHHHh---------------------------hCCCeEEEEEECchhHHHH
Confidence 0123489999999999999999999999886 3789999999999999999
Q ss_pred HHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC---------Cccc
Q 015058 332 EEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC---------SVVG 401 (414)
Q Consensus 332 ~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~---------~~~~ 401 (414)
++++++++++ +|.|.| + .+++.+|+.||++|+|+ ..|++|++++||||||+|||+++++ |.+|
T Consensus 366 ~~~i~~~~l~~~V~f~G-~---~~~~~~~~~adv~v~pS---~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG 438 (500)
T TIGR02918 366 QKIINENQAQDYIHLKG-H---RNLSEVYKDYELYLSAS---TSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNG 438 (500)
T ss_pred HHHHHHcCCCCeEEEcC-C---CCHHHHHHhCCEEEEcC---ccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCE
Confidence 9999999998 899998 3 37899999999999764 3578999999999999999999975 4578
Q ss_pred chhh
Q 015058 402 CLFV 405 (414)
Q Consensus 402 ~~~~ 405 (414)
.++-
T Consensus 439 ~lv~ 442 (500)
T TIGR02918 439 YLIP 442 (500)
T ss_pred EEEe
Confidence 8764
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-21 Score=193.76 Aligned_cols=265 Identities=19% Similarity=0.099 Sum_probs=168.3
Q ss_pred HHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhhc
Q 015058 20 RMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKI 99 (414)
Q Consensus 20 r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k~ 99 (414)
++...++.|.++ ||+|+++|..... .....+..++++++++ .....+.. ....+...+..+..+.. +.+++ +.
T Consensus 15 ~~~~la~~l~~~-G~ev~v~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i-~~ 87 (350)
T cd03785 15 PALALAEELRER-GAEVLFLGTKRGL-EARLVPKAGIPLHTIP--VGGLRRKG-SLKKLKAPFKLLKGVLQ-ARKIL-KK 87 (350)
T ss_pred HHHHHHHHHHhC-CCEEEEEECCCcc-hhhcccccCCceEEEE--ecCcCCCC-hHHHHHHHHHHHHHHHH-HHHHH-Hh
Confidence 344677888886 9999999976432 1222233578898887 22111111 11111111111111111 11222 34
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~ 179 (414)
.+||+||+++++ ..+.+.++++..++|+++..|+.. .. ..++++++.+|.++++|+.+++
T Consensus 88 ~~pDvI~~~~~~---~~~~~~~~a~~~~~p~v~~~~~~~----------~~-------~~~~~~~~~~~~vi~~s~~~~~ 147 (350)
T cd03785 88 FKPDVVVGFGGY---VSGPVGLAAKLLGIPLVIHEQNAV----------PG-------LANRLLARFADRVALSFPETAK 147 (350)
T ss_pred cCCCEEEECCCC---cchHHHHHHHHhCCCEEEEcCCCC----------cc-------HHHHHHHHhhCEEEEcchhhhh
Confidence 799999999863 234455667778999987544421 11 2356677889999999999887
Q ss_pred HHHHhhCCcEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCC
Q 015058 180 ELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRP 258 (414)
Q Consensus 180 ~l~~~~gi~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 258 (414)
+ ..+.++.+++|+ +.+.|.+.+ . ++++ +++++++
T Consensus 148 ~---~~~~~~~~i~n~v~~~~~~~~~--~----~~~~------------------------------------~~~~~~~ 182 (350)
T cd03785 148 Y---FPKDKAVVTGNPVREEILALDR--E----RARL------------------------------------GLRPGKP 182 (350)
T ss_pred c---CCCCcEEEECCCCchHHhhhhh--h----HHhc------------------------------------CCCCCCe
Confidence 6 223458899999 555554431 1 2222 2444554
Q ss_pred eEEEEeccCCCCCChHH-HHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEE-EEEEcCCCChHHHHHHHH
Q 015058 259 ALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL-FIITGKGPDKESYEEKIR 336 (414)
Q Consensus 259 ~~i~~vgrl~~~Kg~~~-LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~-liI~G~G~~~e~l~~~i~ 336 (414)
+|+++|+....|+... +++|++.+.+ +++. ++++|+| +++++++.++
T Consensus 183 -~i~~~~g~~~~~~~~~~l~~a~~~l~~-----------------------------~~~~~~~i~G~g-~~~~l~~~~~ 231 (350)
T cd03785 183 -TLLVFGGSQGARAINEAVPEALAELLR-----------------------------KRLQVIHQTGKG-DLEEVKKAYE 231 (350)
T ss_pred -EEEEECCcHhHHHHHHHHHHHHHHhhc-----------------------------cCeEEEEEcCCc-cHHHHHHHHh
Confidence 6666666556667654 4588877752 2455 5688999 6688999988
Q ss_pred HcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 337 RLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 337 ~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
++ ..+|.|.| ++ ++++.+|+.||++|+. ++ +++++|||++|+|||++...+
T Consensus 232 ~~-~~~v~~~g-~~--~~~~~~l~~ad~~v~~----sg---~~t~~Eam~~G~Pvv~~~~~~ 282 (350)
T cd03785 232 EL-GVNYEVFP-FI--DDMAAAYAAADLVISR----AG---ASTVAELAALGLPAILIPLPY 282 (350)
T ss_pred cc-CCCeEEee-hh--hhHHHHHHhcCEEEEC----CC---HhHHHHHHHhCCCEEEeecCC
Confidence 87 34899998 54 8999999999999952 22 578999999999999987543
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-21 Score=194.24 Aligned_cols=278 Identities=16% Similarity=0.077 Sum_probs=175.4
Q ss_pred CEEEEEEeCCCCCChH-HHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHH
Q 015058 5 GRACVVVLGDLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLK 83 (414)
Q Consensus 5 ~~~~v~~~~d~~~~~r-~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k 83 (414)
.++.+++.+ .|++.+ +...+..|.++ ||+|++++...+. .....+..++++++++ .....+.+ ....+....+
T Consensus 2 ~~i~i~~~g-~gG~~~~~~~la~~L~~~-g~ev~vv~~~~~~-~~~~~~~~g~~~~~~~--~~~~~~~~-~~~~l~~~~~ 75 (357)
T PRK00726 2 KKILLAGGG-TGGHVFPALALAEELKKR-GWEVLYLGTARGM-EARLVPKAGIEFHFIP--SGGLRRKG-SLANLKAPFK 75 (357)
T ss_pred cEEEEEcCc-chHhhhHHHHHHHHHHhC-CCEEEEEECCCch-hhhccccCCCcEEEEe--ccCcCCCC-hHHHHHHHHH
Confidence 344555444 343333 34677788775 9999999986532 1222234688999987 32111111 1111222222
Q ss_pred HHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHH
Q 015058 84 PLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY 163 (414)
Q Consensus 84 ~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~ 163 (414)
.+..+. .+++++ +..+||+||+|++ ...+.+.++++..++|+|++.|+.. .. +.+++.
T Consensus 76 ~~~~~~-~~~~~i-k~~~pDvv~~~~~---~~~~~~~~~~~~~~~p~v~~~~~~~----------~~-------~~~r~~ 133 (357)
T PRK00726 76 LLKGVL-QARKIL-KRFKPDVVVGFGG---YVSGPGGLAARLLGIPLVIHEQNAV----------PG-------LANKLL 133 (357)
T ss_pred HHHHHH-HHHHHH-HhcCCCEEEECCC---cchhHHHHHHHHcCCCEEEEcCCCC----------cc-------HHHHHH
Confidence 222211 222333 3478999999986 2234556777788999997655431 11 245677
Q ss_pred hccCCEEEEeCHHHHHHHHHhhCCcEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccce
Q 015058 164 GKMANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETI 242 (414)
Q Consensus 164 ~k~ad~ii~vS~~~~~~l~~~~gi~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (414)
++.+|.+++.++.+.. +.-+.++.+++|+ +.+.+.+.. . +.++
T Consensus 134 ~~~~d~ii~~~~~~~~---~~~~~~i~vi~n~v~~~~~~~~~--~----~~~~--------------------------- 177 (357)
T PRK00726 134 ARFAKKVATAFPGAFP---EFFKPKAVVTGNPVREEILALAA--P----PARL--------------------------- 177 (357)
T ss_pred HHHhchheECchhhhh---ccCCCCEEEECCCCChHhhcccc--h----hhhc---------------------------
Confidence 7899999999986532 2223459999999 554443321 1 1111
Q ss_pred eeeccccccccCCCCCeEEEEeccCCCCCChHHHH-HHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEE
Q 015058 243 FTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILL-EAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII 321 (414)
Q Consensus 243 ~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~Ll-eA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI 321 (414)
+++++.+ +|+++|+..+.|++..++ +|++.+.+ .+ ..+++
T Consensus 178 ---------~~~~~~~-~i~~~gg~~~~~~~~~~l~~a~~~~~~----------------------------~~-~~~~~ 218 (357)
T PRK00726 178 ---------AGREGKP-TLLVVGGSQGARVLNEAVPEALALLPE----------------------------AL-QVIHQ 218 (357)
T ss_pred ---------cCCCCCe-EEEEECCcHhHHHHHHHHHHHHHHhhh----------------------------Cc-EEEEE
Confidence 2333443 777888888888876665 88887753 24 56789
Q ss_pred EcCCCChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 322 TGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 322 ~G~G~~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
+|+|+. +++++..+ ++++ |.|.| + .++++.+|++||++|+. +| |++++|||++|+|+|++..++
T Consensus 219 ~G~g~~-~~~~~~~~-~~~~-v~~~g-~--~~~~~~~~~~~d~~i~~----~g---~~~~~Ea~~~g~Pvv~~~~~~ 282 (357)
T PRK00726 219 TGKGDL-EEVRAAYA-AGIN-AEVVP-F--IDDMAAAYAAADLVICR----AG---ASTVAELAAAGLPAILVPLPH 282 (357)
T ss_pred cCCCcH-HHHHHHhh-cCCc-EEEee-h--HhhHHHHHHhCCEEEEC----CC---HHHHHHHHHhCCCEEEecCCC
Confidence 999986 45555556 7776 99998 5 48999999999999952 22 689999999999999987643
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.1e-22 Score=197.86 Aligned_cols=218 Identities=15% Similarity=0.191 Sum_probs=160.6
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~ 179 (414)
.++|+++++.+.... . .+.......+.++.+|+....... ......+...++++.+. .+.+|.++|+|+..++
T Consensus 98 ~~~diii~~~~~~~~--~--~~~~~~~~~~~i~~~h~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~d~ii~~s~~~~~ 170 (372)
T cd04949 98 TKPDVFILDRPTLDG--Q--ALLNMKKAAKVVVVLHSNHVSDNN--DPVHSLINNFYEYVFEN-LDKVDGVIVATEQQKQ 170 (372)
T ss_pred CCCCEEEECCccccc--h--hHHhccCCceEEEEEChHHhCCcc--cccccccchhhHHHHhC-hhhCCEEEEccHHHHH
Confidence 789999999873221 1 223333456788889975321100 00112223333333222 4789999999999999
Q ss_pred HHHHhhCCc--EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCC
Q 015058 180 ELAQNWGIK--ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN 256 (414)
Q Consensus 180 ~l~~~~gi~--i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 256 (414)
.+.+.++.. +.+|||+ +.+.+.+.+. .. .
T Consensus 171 ~l~~~~~~~~~v~~ip~g~~~~~~~~~~~-----------------------------------------------~~-~ 202 (372)
T cd04949 171 DLQKQFGNYNPIYTIPVGSIDPLKLPAQF-----------------------------------------------KQ-R 202 (372)
T ss_pred HHHHHhCCCCceEEEcccccChhhcccch-----------------------------------------------hh-c
Confidence 998887654 7899999 5443433210 01 1
Q ss_pred CCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHH
Q 015058 257 RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIR 336 (414)
Q Consensus 257 ~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~ 336 (414)
.+..++++||+.++||++.+++|+..+.+ ..|+++|+|+|.|+..+.+++.++
T Consensus 203 ~~~~i~~vgrl~~~K~~~~li~a~~~l~~---------------------------~~~~~~l~i~G~g~~~~~~~~~~~ 255 (372)
T cd04949 203 KPHKIITVARLAPEKQLDQLIKAFAKVVK---------------------------QVPDATLDIYGYGDEEEKLKELIE 255 (372)
T ss_pred CCCeEEEEEccCcccCHHHHHHHHHHHHH---------------------------hCCCcEEEEEEeCchHHHHHHHHH
Confidence 22478999999999999999999999986 368999999999999999999999
Q ss_pred HcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC---------Ccccchhh
Q 015058 337 RLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC---------SVVGCLFV 405 (414)
Q Consensus 337 ~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~---------~~~~~~~~ 405 (414)
+++++ +|.|.| +.+++..+|+.||++|.++. .+++|++++|||++|+|||+++++ |.+|.++.
T Consensus 256 ~~~~~~~v~~~g---~~~~~~~~~~~ad~~v~~S~---~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~ 328 (372)
T cd04949 256 ELGLEDYVFLKG---YTRDLDEVYQKAQLSLLTSQ---SEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVP 328 (372)
T ss_pred HcCCcceEEEcC---CCCCHHHHHhhhhEEEeccc---ccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeC
Confidence 99998 999998 67899999999999997643 478999999999999999999876 45666654
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.1e-21 Score=195.14 Aligned_cols=302 Identities=17% Similarity=0.070 Sum_probs=182.2
Q ss_pred CCCCCEEEEEEeCCCC-CChHHHHHHHHHHhhCCCcEEEEecCCC--CCCcccccCCCeEEEEeecCCCCCCCCC-----
Q 015058 1 MGRRGRACVVVLGDLG-RSPRMQYQALSLARQMSLEVDVVAYGGS--KPHAAILEHPSIHIHTMTQWPTIPRGLP----- 72 (414)
Q Consensus 1 ~~~~~~~~v~~~~d~~-~~~r~~~~a~~La~~~g~eV~vv~~~~~--~~~~~~~~~~~i~i~~v~~~~~~~~~~~----- 72 (414)
|...+.+.++...+.+ ...|-|..+..|+++ |+.|..+...+- .+.. ...+..++..-. ....+...
T Consensus 1 ~~~~~~~~~~~~~~w~~~~~~~qhl~~~~a~~-~~~vl~v~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~ 75 (373)
T cd04950 1 MADRPDILVFSADDWDFLWQRPQHLAARLAER-GNRVLYVEPPGLSRTPQP--RGRDWVRVVLRL--RAALRRPRRLDPL 75 (373)
T ss_pred CCCCCeEEEecccCcCCCCCCHHHHHHHHHhC-CCeEEEEeCCCccCCCCC--CCcccEEeeecc--cccccCccccCcc
Confidence 3444455555444555 567888999999975 999999876542 2111 112222232111 00000000
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHH
Q 015058 73 KVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF 152 (414)
Q Consensus 73 ~~~~~~~~l~k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~ 152 (414)
-.+.........+.. .+.|.......+..++.+++| .+. .++..+.+.++|++.++..... .+..+.
T Consensus 76 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~P---~~~---~~~~~~~~~~~Vyd~~D~~~~~----~~~~~~- 142 (373)
T cd04950 76 IPARRRRLLRLLLNA--LLFWAQLELGFGRPILWYYTP---YTL---PVAALLQASLVVYDCVDDLSAF----PGGPPE- 142 (373)
T ss_pred ccchhhhHHHHHHHH--HHHHHHHhcCCCCcEEEEeCc---cHH---HHHhhcCCCeEEEEcccchhcc----CCCCHH-
Confidence 001111111111111 111211111244556666655 222 2223356789999988753211 111111
Q ss_pred HHHHHHHHHHHhccCCEEEEeCHHHHHHHHHhhCCcEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccC
Q 015058 153 VSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSN 231 (414)
Q Consensus 153 ~~i~~~~Ek~~~k~ad~ii~vS~~~~~~l~~~~gi~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 231 (414)
..+.|+.+++.||.|+|+|+.+++.+.+. +.++.+|+|| |.+.|.+...... ..+ .+
T Consensus 143 ---~~~~e~~~~~~ad~vi~~S~~l~~~~~~~-~~~i~~i~ngvd~~~f~~~~~~~~-~~~-~~---------------- 200 (373)
T cd04950 143 ---LLEAERRLLKRADLVFTTSPSLYEAKRRL-NPNVVLVPNGVDYEHFAAARDPPP-PPA-DL---------------- 200 (373)
T ss_pred ---HHHHHHHHHHhCCEEEECCHHHHHHHhhC-CCCEEEcccccCHHHhhcccccCC-Chh-HH----------------
Confidence 12678899999999999999999988764 6669999999 7777765431100 000 00
Q ss_pred CCCCCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCcc
Q 015058 232 GMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQ 311 (414)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (414)
...+++ .++|+|++.+.++++.+.++++.
T Consensus 201 ---------------------~~~~~~-~i~y~G~l~~~~d~~ll~~la~~----------------------------- 229 (373)
T cd04950 201 ---------------------AALPRP-VIGYYGAIAEWLDLELLEALAKA----------------------------- 229 (373)
T ss_pred ---------------------hcCCCC-EEEEEeccccccCHHHHHHHHHH-----------------------------
Confidence 112344 89999999998888766554431
Q ss_pred CCCCcEEEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCC--CCCCCchhHHHHHHcCC
Q 015058 312 YLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS--SGLDLPMKVCYCWYSRY 389 (414)
Q Consensus 312 ~~~p~i~liI~G~G~~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~--~g~~lP~kl~Eama~G~ 389 (414)
.|+++|+|+|+|+...... +.....||+|+| +++.++++.+|+.||++++|.... ...++|+|++||||||+
T Consensus 230 --~p~~~~vliG~~~~~~~~~---~~~~~~nV~~~G-~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~ 303 (373)
T cd04950 230 --RPDWSFVLIGPVDVSIDPS---ALLRLPNVHYLG-PKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGK 303 (373)
T ss_pred --CCCCEEEEECCCcCccChh---HhccCCCEEEeC-CCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCC
Confidence 4789999999984333222 222356999997 999999999999999999875432 23468999999999999
Q ss_pred eEEEeeeCCc
Q 015058 390 SLKLLWTCSV 399 (414)
Q Consensus 390 Pvi~s~~~~~ 399 (414)
|||+++.+.+
T Consensus 304 PVVat~~~~~ 313 (373)
T cd04950 304 PVVATPLPEV 313 (373)
T ss_pred CEEecCcHHH
Confidence 9999886644
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.1e-21 Score=191.71 Aligned_cols=275 Identities=15% Similarity=0.067 Sum_probs=168.9
Q ss_pred EEEEEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHH
Q 015058 6 RACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPL 85 (414)
Q Consensus 6 ~~~v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l 85 (414)
++++++.+.-|.-.+....++.|.++ ||+|+++|..... .....+..++++++++ .....+.. ....+......+
T Consensus 2 ~i~~~~g~~~g~~~~~~~La~~L~~~-g~eV~vv~~~~~~-~~~~~~~~g~~~~~i~--~~~~~~~~-~~~~l~~~~~~~ 76 (348)
T TIGR01133 2 KVVLAAGGTGGHIFPALAVAEELIKR-GVEVLWLGTKRGL-EKRLVPKAGIEFYFIP--VGGLRRKG-SFRLIKTPLKLL 76 (348)
T ss_pred eEEEEeCccHHHHhHHHHHHHHHHhC-CCEEEEEeCCCcc-hhcccccCCCceEEEe--ccCcCCCC-hHHHHHHHHHHH
Confidence 45555555422222233678888885 9999999864321 2222334688999887 32211111 111111111111
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhc
Q 015058 86 IQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK 165 (414)
Q Consensus 86 ~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k 165 (414)
..+.. +.++ .+..+||+||++++ ...+.+.++++..++|+|+..|+.. . .+.++++++
T Consensus 77 ~~~~~-l~~~-i~~~~pDvVi~~~~---~~~~~~~~~~~~~~~p~v~~~~~~~----------~-------~~~~~~~~~ 134 (348)
T TIGR01133 77 KAVFQ-ARRI-LKKFKPDAVIGFGG---YVSGPAGLAAKLLGIPLFHHEQNAV----------P-------GLTNKLLSR 134 (348)
T ss_pred HHHHH-HHHH-HHhcCCCEEEEcCC---cccHHHHHHHHHcCCCEEEECCCCC----------c-------cHHHHHHHH
Confidence 11111 1121 24479999999976 2334455667778899975433221 1 123567788
Q ss_pred cCCEEEEeCHHHHHHHHHhhCCcEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceee
Q 015058 166 MANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFT 244 (414)
Q Consensus 166 ~ad~ii~vS~~~~~~l~~~~gi~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (414)
.+|.++++|+.+++++ +..+++|+ +...+.+.. . ++++
T Consensus 135 ~~d~ii~~~~~~~~~~------~~~~i~n~v~~~~~~~~~--~----~~~~----------------------------- 173 (348)
T TIGR01133 135 FAKKVLISFPGAKDHF------EAVLVGNPVRQEIRSLPV--P----RERF----------------------------- 173 (348)
T ss_pred HhCeeEECchhHhhcC------CceEEcCCcCHHHhcccc--h----hhhc-----------------------------
Confidence 9999999999988765 34688998 444333221 1 1111
Q ss_pred eccccccccCCCCCeEEEEeccCCCCCChHH-HHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEE-EEE
Q 015058 245 SLAGIDVFLKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IIT 322 (414)
Q Consensus 245 ~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~-LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~l-iI~ 322 (414)
+++++.+ +|+++|+....|++.. +++|++.+.+ +++++ +++
T Consensus 174 -------~~~~~~~-~i~~~gg~~~~~~~~~~l~~a~~~l~~-----------------------------~~~~~~~~~ 216 (348)
T TIGR01133 174 -------GLREGKP-TILVLGGSQGAKILNELVPKALAKLAE-----------------------------KGIQIVHQT 216 (348)
T ss_pred -------CCCCCCe-EEEEECCchhHHHHHHHHHHHHHHHhh-----------------------------cCcEEEEEC
Confidence 2444544 7888888777888765 4588877753 13444 456
Q ss_pred cCCCChHHHHHHHHHcCCCc-EEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 323 GKGPDKESYEEKIRRLRLKR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 323 G~G~~~e~l~~~i~~l~l~~-V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
|+|+ ++++++.++++++.+ |.|. .. |++.+|++||++|+. +| |++++|||++|+|+|+++..|
T Consensus 217 g~~~-~~~l~~~~~~~~l~~~v~~~----~~-~~~~~l~~ad~~v~~----~g---~~~l~Ea~~~g~Pvv~~~~~~ 280 (348)
T TIGR01133 217 GKND-LEKVKNVYQELGIEAIVTFI----DE-NMAAAYAAADLVISR----AG---ASTVAELAAAGVPAILIPYPY 280 (348)
T ss_pred Ccch-HHHHHHHHhhCCceEEecCc----cc-CHHHHHHhCCEEEEC----CC---hhHHHHHHHcCCCEEEeeCCC
Confidence 6664 488999999999874 4443 23 999999999999952 22 789999999999999987754
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-20 Score=192.72 Aligned_cols=216 Identities=15% Similarity=0.121 Sum_probs=150.5
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
..+||++|++.....+. ...+++..++|+++..|..... ++ ..++.+.++++++++.+|.|+++|+.++
T Consensus 122 ~~~Pd~v~~~~~~~~~~---~l~~~~~~~ip~vl~~~~~~~~----s~----~~~~~~~~~~r~~~~~~d~ii~~S~~~~ 190 (425)
T PRK05749 122 FWRPKLVIIMETELWPN---LIAELKRRGIPLVLANARLSER----SF----KRYQKFKRFYRLLFKNIDLVLAQSEEDA 190 (425)
T ss_pred hhCCCEEEEEecchhHH---HHHHHHHCCCCEEEEeccCChh----hH----HHHHHHHHHHHHHHHhCCEEEECCHHHH
Confidence 37999999885532232 2223456789998865544210 01 1123345677888899999999999999
Q ss_pred HHHHHhhCCc--EEEecCCCCCCcCCCC-hHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCC
Q 015058 179 HELAQNWGIK--ATVLYDQPPEFFHPTS-LEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (414)
Q Consensus 179 ~~l~~~~gi~--i~vI~n~~~~~f~p~~-~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 255 (414)
+.+.+. |.+ +.+++|.+.+.+.+.. .....++++++ + +
T Consensus 191 ~~l~~~-g~~~~i~vi~n~~~d~~~~~~~~~~~~~~r~~~------------------------------------~--~ 231 (425)
T PRK05749 191 ERFLAL-GAKNEVTVTGNLKFDIEVPPELAARAATLRRQL------------------------------------A--P 231 (425)
T ss_pred HHHHHc-CCCCCcEecccccccCCCChhhHHHHHHHHHHh------------------------------------c--C
Confidence 999874 754 6788887544443321 11223344332 1 2
Q ss_pred CCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCCh-HHHHHH
Q 015058 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYEEK 334 (414)
Q Consensus 256 ~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~-e~l~~~ 334 (414)
+++ +++++|+. .|+.+.|++|++.+.+ .+|+++|+|+|+|+++ ++++++
T Consensus 232 ~~~-vil~~~~~--~~~~~~ll~A~~~l~~---------------------------~~~~~~liivG~g~~r~~~l~~~ 281 (425)
T PRK05749 232 NRP-VWIAASTH--EGEEELVLDAHRALLK---------------------------QFPNLLLILVPRHPERFKEVEEL 281 (425)
T ss_pred CCc-EEEEeCCC--chHHHHHHHHHHHHHH---------------------------hCCCcEEEEcCCChhhHHHHHHH
Confidence 444 66777764 6789999999998875 3689999999999987 799999
Q ss_pred HHHcCCCcEEEecCCC-----------ChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 335 IRRLRLKRVAFRTMWL-----------SAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 335 i~~l~l~~V~f~g~~v-----------~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
++++|++.+.|.++.. +.+|++.+|+.||+++++ ++..+++|..++||||||+|||++..
T Consensus 282 ~~~~gl~~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~--~S~~e~~g~~~lEAma~G~PVI~g~~ 352 (425)
T PRK05749 282 LKKAGLSYVRRSQGEPPSADTDVLLGDTMGELGLLYAIADIAFVG--GSLVKRGGHNPLEPAAFGVPVISGPH 352 (425)
T ss_pred HHhCCCcEEEccCCCCCCCCCcEEEEecHHHHHHHHHhCCEEEEC--CCcCCCCCCCHHHHHHhCCCEEECCC
Confidence 9999997666665322 246899999999996653 22234578889999999999999754
|
|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-20 Score=188.73 Aligned_cols=170 Identities=11% Similarity=0.093 Sum_probs=131.9
Q ss_pred cCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHH-hccCCEEEEeCHHHHHHHHHhhCC----cEEEecCC-CCCC
Q 015058 126 RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY-GKMANGCLCVTQAMQHELAQNWGI----KATVLYDQ-PPEF 199 (414)
Q Consensus 126 ~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~-~k~ad~ii~vS~~~~~~l~~~~gi----~i~vI~n~-~~~~ 199 (414)
.|.|+++++|+.. ++.+.++.++ .+.||.++|+|+.+++.+.+. |+ ++.+|||| |++.
T Consensus 68 ~~~~~v~e~~~~~---------------~l~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~-g~~~~~~i~vIpNGVd~~~ 131 (331)
T PHA01630 68 VGKNIVFEVADTD---------------AISHTALYFFRNQPVDEIVVPSQWSKNAFYTS-GLKIPQPIYVIPHNLNPRM 131 (331)
T ss_pred cCCceEEEEEeec---------------hhhHHHHHHHhhccCCEEEECCHHHHHHHHHc-CCCCCCCEEEECCCCCHHH
Confidence 4779999998832 1333455667 789999999999999998765 43 48899999 7777
Q ss_pred cCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHH
Q 015058 200 FHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEA 279 (414)
Q Consensus 200 f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA 279 (414)
|.|...+ .+.+.+++++|++.++||++.||+|
T Consensus 132 f~~~~~~------------------------------------------------~~~~~vl~~~g~~~~~Kg~d~Li~A 163 (331)
T PHA01630 132 FEYKPKE------------------------------------------------KPHPCVLAILPHSWDRKGGDIVVKI 163 (331)
T ss_pred cCCCccc------------------------------------------------cCCCEEEEEeccccccCCHHHHHHH
Confidence 7654210 0123577889999999999999999
Q ss_pred HHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCChhhHHHHH
Q 015058 280 ALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL 359 (414)
Q Consensus 280 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l 359 (414)
++.+.++ .++++|+|+|+|+...++ .++.. +.| .++.++++.+|
T Consensus 164 ~~~l~~~---------------------------~~~~~llivG~~~~~~~l------~~~~~--~~~-~v~~~~l~~~y 207 (331)
T PHA01630 164 FHELQNE---------------------------GYDFYFLIKSSNMLDPRL------FGLNG--VKT-PLPDDDIYSLF 207 (331)
T ss_pred HHHHHhh---------------------------CCCEEEEEEeCcccchhh------ccccc--eec-cCCHHHHHHHH
Confidence 9998762 578999999988764432 13332 233 57999999999
Q ss_pred hhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 360 GSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 360 ~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
++||++|+|+. .+++|++++||||||+|||+|+++|
T Consensus 208 ~~aDv~v~pS~---~E~fgl~~lEAMA~G~PVIas~~gg 243 (331)
T PHA01630 208 AGCDILFYPVR---GGAFEIPVIEALALGLDVVVTEKGA 243 (331)
T ss_pred HhCCEEEECCc---cccCChHHHHHHHcCCCEEEeCCCC
Confidence 99999998743 4789999999999999999999887
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.4e-19 Score=180.66 Aligned_cols=198 Identities=13% Similarity=0.172 Sum_probs=143.6
Q ss_pred EEeCCCCchHHHHHHHHHhhc-CCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHHHHHHh
Q 015058 106 LVQNPPSVPTLVAVKWASSLR-RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQN 184 (414)
Q Consensus 106 h~~~pp~~~~~~~~~la~~~~-~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~~l~~~ 184 (414)
.-.+||++..++.+. .+++ +.+++.++|+..- . .++.+++.+ .+.+||+|+.+++.+++.
T Consensus 50 ~~~~~~~~~~~~~~~--~~~~~~~~~~tt~~g~~~-~---------------~~y~~~m~~-~~~vIavS~~t~~~L~~~ 110 (335)
T PHA01633 50 IPFHPPSLNPYLYAY--YQFKGKKYFYTTCDGIPN-I---------------EIVNKYLLQ-DVKFIPNSKFSAENLQEV 110 (335)
T ss_pred eecCCcccchHHhhh--hhhcCCCceEEeeCCcCc-h---------------HHHHHHHhc-CCEEEeCCHHHHHHHHHh
Confidence 344677666555442 3344 5678889998631 0 234456655 558899999999999875
Q ss_pred hCCc-EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeEEE
Q 015058 185 WGIK-ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVV 262 (414)
Q Consensus 185 ~gi~-i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 262 (414)
|++ ..+|++| |.+.|.|... ...+++++++.. . ++. .+++
T Consensus 111 -G~~~~i~I~~GVD~~~f~p~~~-~~~~~r~~~~~~----------------------------------~-~~~-~~i~ 152 (335)
T PHA01633 111 -GLQVDLPVFHGINFKIVENAEK-LVPQLKQKLDKD----------------------------------F-PDT-IKFG 152 (335)
T ss_pred -CCCCceeeeCCCChhhcCccch-hhHHHHHHhCcC----------------------------------C-CCC-eEEE
Confidence 765 2346778 8888877531 223455554311 1 233 4889
Q ss_pred EeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCC----cEEEEEEcCCCChHHHHHHHHHc
Q 015058 263 SSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP----RLLFIITGKGPDKESYEEKIRRL 338 (414)
Q Consensus 263 ~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~i~liI~G~G~~~e~l~~~i~~l 338 (414)
++||++++||++.|++|++.+.++ +| +++++++|++ ..+++
T Consensus 153 ~vGRl~~~KG~~~LI~A~~~L~~~---------------------------~p~~~~~i~l~ivG~~--------~~~~l 197 (335)
T PHA01633 153 IVSGLTKRKNMDLMLQVFNELNTK---------------------------YPDIAKKIHFFVISHK--------QFTQL 197 (335)
T ss_pred EEeCCccccCHHHHHHHHHHHHHh---------------------------CCCccccEEEEEEcHH--------HHHHc
Confidence 999999999999999999998763 33 4688888742 34567
Q ss_pred CCC-cEEEec--CCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 339 RLK-RVAFRT--MWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 339 ~l~-~V~f~g--~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
++. +|+|.| ++++++|++.+|++||++|+|+. .|++|+.++||||||+|||+++.+|
T Consensus 198 ~l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~---~EgfGlvlLEAMA~G~PVVas~~~~ 257 (335)
T PHA01633 198 EVPANVHFVAEFGHNSREYIFAFYGAMDFTIVPSG---TEGFGMPVLESMAMGTPVIHQLMPP 257 (335)
T ss_pred CCCCcEEEEecCCCCCHHHHHHHHHhCCEEEECCc---cccCCHHHHHHHHcCCCEEEccCCC
Confidence 887 999995 37789999999999999998743 5889999999999999999997764
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.3e-19 Score=176.58 Aligned_cols=196 Identities=12% Similarity=0.093 Sum_probs=134.3
Q ss_pred hcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHH
Q 015058 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (414)
Q Consensus 98 k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~ 177 (414)
+..+||+||++.|. ..+......+..++|++...+++.. . .+|+++.+|.++++|+.+
T Consensus 101 ~~~~pD~Vi~~~~~---~~~~~~~~~~~~~ip~~~~~td~~~---------~----------~~~~~~~ad~i~~~s~~~ 158 (380)
T PRK13609 101 QAEKPDIVINTFPI---IAVPELKKQTGISIPTYNVLTDFCL---------H----------KIWVHREVDRYFVATDHV 158 (380)
T ss_pred HHhCcCEEEEcChH---HHHHHHHHhcCCCCCeEEEeCCCCC---------C----------cccccCCCCEEEECCHHH
Confidence 34799999998762 2222222233457887754444321 1 125568999999999999
Q ss_pred HHHHHHhhCCc---EEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccC
Q 015058 178 QHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (414)
Q Consensus 178 ~~~l~~~~gi~---i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 254 (414)
++.+.+. |++ +.++.+...+.|.+.. .+..+++++ +++
T Consensus 159 ~~~l~~~-gi~~~ki~v~G~p~~~~f~~~~--~~~~~~~~~------------------------------------~l~ 199 (380)
T PRK13609 159 KKVLVDI-GVPPEQVVETGIPIRSSFELKI--NPDIIYNKY------------------------------------QLC 199 (380)
T ss_pred HHHHHHc-CCChhHEEEECcccChHHcCcC--CHHHHHHHc------------------------------------CCC
Confidence 9999874 774 6666444223343322 123345443 355
Q ss_pred CCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEE-cCC-CChHHHH
Q 015058 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKG-PDKESYE 332 (414)
Q Consensus 255 ~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~-G~G-~~~e~l~ 332 (414)
++++.++++.|++...|+++.+++++.. .++++++++ |++ +.+++++
T Consensus 200 ~~~~~il~~~G~~~~~k~~~~li~~l~~-------------------------------~~~~~~viv~G~~~~~~~~l~ 248 (380)
T PRK13609 200 PNKKILLIMAGAHGVLGNVKELCQSLMS-------------------------------VPDLQVVVVCGKNEALKQSLE 248 (380)
T ss_pred CCCcEEEEEcCCCCCCcCHHHHHHHHhh-------------------------------CCCcEEEEEeCCCHHHHHHHH
Confidence 5666677888999999999998888642 357888765 544 4678888
Q ss_pred HHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 333 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 333 ~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
+++++++ .+|+|+| + .++++.+|++||++|+ . + -|+.++|||+||+|||+++.
T Consensus 249 ~~~~~~~-~~v~~~g-~--~~~~~~l~~~aD~~v~--~-~----gg~t~~EA~a~g~PvI~~~~ 301 (380)
T PRK13609 249 DLQETNP-DALKVFG-Y--VENIDELFRVTSCMIT--K-P----GGITLSEAAALGVPVILYKP 301 (380)
T ss_pred HHHhcCC-CcEEEEe-c--hhhHHHHHHhccEEEe--C-C----CchHHHHHHHhCCCEEECCC
Confidence 8887766 5899998 5 4689999999999984 1 1 26688999999999999863
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.7e-18 Score=182.11 Aligned_cols=247 Identities=16% Similarity=0.087 Sum_probs=161.6
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHH-hhcCCeEEEEEcCcchhhhhhcc-CCCcHHH-----------------HHHHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTLLSLSL-GRRSHFV-----------------SIYRWIE 160 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~-~~~~~~~Iv~~H~~~~~l~~~~~-~~~~~~~-----------------~i~~~~E 160 (414)
.++||+|+|.+ .++.++..++ +..++|+|.|.|.... ...+ +....+. .-..++|
T Consensus 147 ~~~dViH~HeW---m~g~a~~~lK~~~~~VptVfTtHAT~~---GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE 220 (590)
T cd03793 147 EPAVVAHFHEW---QAGVGLPLLRKRKVDVSTIFTTHATLL---GRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIE 220 (590)
T ss_pred CCCeEEEEcch---hHhHHHHHHHHhCCCCCEEEEeccccc---ccccccCCcccchhhhhcchhhhhhcccchHHHHHH
Confidence 68999999998 6666666666 4468899999997532 1100 0000011 1223589
Q ss_pred HHHhccCCEEEEeCHHHHHHHHHhhCCc-EEEecCC-CCCCcCCCChH-HHH-HHHHHhhhhccCCCCccccccCCCCCC
Q 015058 161 KYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTSLE-EKH-ELFCRLNKILHQPLGVQDCVSNGMEGQ 236 (414)
Q Consensus 161 k~~~k~ad~ii~vS~~~~~~l~~~~gi~-i~vI~n~-~~~~f~p~~~~-~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~~ 236 (414)
++....||.+++||+.+++++...++.+ -.||||| +++.|.+.... .++ ..++++..- +
T Consensus 221 ~~aa~~Ad~fttVS~it~~E~~~Ll~~~pd~ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f----------~------- 283 (590)
T cd03793 221 RAAAHCAHVFTTVSEITAYEAEHLLKRKPDVVLPNGLNVKKFSALHEFQNLHAQSKEKINEF----------V------- 283 (590)
T ss_pred HHHHhhCCEEEECChHHHHHHHHHhCCCCCEEeCCCcchhhcccchhhhhhhHHhhhhhhHH----------H-------
Confidence 9999999999999999999999988987 3499999 88888665321 111 222222100 0
Q ss_pred CCccceeeeccccccccCCCCCeEEEEeccCCC-CCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCC
Q 015058 237 KADETIFTSLAGIDVFLKPNRPALVVSSTSWTP-DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP 315 (414)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~-~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 315 (414)
...| .+..+++++++++++++||+.. +||++.||+|+.++.... ..+.| | ..
T Consensus 284 ---~~~~----~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l----~~~~~-----------~-----~t 336 (590)
T cd03793 284 ---RGHF----YGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLL----KVEGS-----------D-----TT 336 (590)
T ss_pred ---HHHH----hhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHH----HhcCC-----------C-----Ce
Confidence 0001 2334566677633344899999 999999999999987642 11111 0 01
Q ss_pred cEEEEEEcCC----------------------------------------------------------------------
Q 015058 316 RLLFIITGKG---------------------------------------------------------------------- 325 (414)
Q Consensus 316 ~i~liI~G~G---------------------------------------------------------------------- 325 (414)
-+-|+|+-.+
T Consensus 337 Vvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~ 416 (590)
T cd03793 337 VVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLP 416 (590)
T ss_pred EEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCC
Confidence 1222222111
Q ss_pred ---------CChHHHHHHHHHcCCC-------cEEEecCCCC------hhhHHHHHhhccEEEeeccCCCCCCCchhHHH
Q 015058 326 ---------PDKESYEEKIRRLRLK-------RVAFRTMWLS------AEDYPLLLGSADLGVCLHTSSSGLDLPMKVCY 383 (414)
Q Consensus 326 ---------~~~e~l~~~i~~l~l~-------~V~f~g~~v~------~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~E 383 (414)
...+.+-..+++++|- .|+|...+++ ..++.++++.||+||+|+. .|+++..++|
T Consensus 417 p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~---yE~fG~~~lE 493 (590)
T cd03793 417 PVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSY---YEPWGYTPAE 493 (590)
T ss_pred CeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccc---cCCCCcHHHH
Confidence 1223455566666662 4677755544 4469999999999998743 4788999999
Q ss_pred HHHcCCeEEEeeeCCc
Q 015058 384 CWYSRYSLKLLWTCSV 399 (414)
Q Consensus 384 ama~G~Pvi~s~~~~~ 399 (414)
|||||+|||+|+.+|.
T Consensus 494 Ama~G~PvI~t~~~gf 509 (590)
T cd03793 494 CTVMGIPSITTNLSGF 509 (590)
T ss_pred HHHcCCCEEEccCcch
Confidence 9999999999999876
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.3e-18 Score=167.80 Aligned_cols=195 Identities=12% Similarity=0.119 Sum_probs=129.6
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhh--cCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~--~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~ 177 (414)
.+-|+||+|+|+.....+...++.++ .++|+|+++|+..+ .. ...... .++.|+++++.||.++|+|+.|
T Consensus 63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~-~~---~~~~~~----~~~~~~~~~~~aD~iI~~S~~~ 134 (333)
T PRK09814 63 KPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEP-LR---FDSNYY----LMKEEIDMLNLADVLIVHSKKM 134 (333)
T ss_pred CCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHH-Hh---ccccch----hhHHHHHHHHhCCEEEECCHHH
Confidence 34499999998644322222222222 37999999999743 11 111111 2466888999999999999999
Q ss_pred HHHHHHhhCCc---EEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccC
Q 015058 178 QHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (414)
Q Consensus 178 ~~~l~~~~gi~---i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 254 (414)
+++++++ |.+ +.++++++.... .. .+ . .+
T Consensus 135 ~~~l~~~-g~~~~~i~~~~~~~~~~~--~~------~~-~--------------------------------------~~ 166 (333)
T PRK09814 135 KDRLVEE-GLTTDKIIVQGIFDYLND--IE------LV-K--------------------------------------TP 166 (333)
T ss_pred HHHHHHc-CCCcCceEeccccccccc--cc------cc-c--------------------------------------cc
Confidence 9999875 763 666666642110 00 00 0 01
Q ss_pred CCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHH
Q 015058 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK 334 (414)
Q Consensus 255 ~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~ 334 (414)
.++ ..|+|+|++.+.++ +.+ ..++++|+|+|+|++++
T Consensus 167 ~~~-~~i~yaG~l~k~~~----------l~~---------------------------~~~~~~l~i~G~g~~~~----- 203 (333)
T PRK09814 167 SFQ-KKINFAGNLEKSPF----------LKN---------------------------WSQGIKLTVFGPNPEDL----- 203 (333)
T ss_pred cCC-ceEEEecChhhchH----------HHh---------------------------cCCCCeEEEECCCcccc-----
Confidence 122 38999999984321 111 13578999999999765
Q ss_pred HHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccC----C----CCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 335 IRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTS----S----SGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 335 i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s----~----~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
....+|+|.| +++.++++.+|+. |+++++... . ....+|+|+.+|||||+|||+++.++
T Consensus 204 ---~~~~~V~f~G-~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~ 270 (333)
T PRK09814 204 ---ENSANISYKG-WFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAA 270 (333)
T ss_pred ---ccCCCeEEec-CCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCcc
Confidence 1234999997 9999999999998 777644221 0 12458999999999999999987654
|
|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-17 Score=174.58 Aligned_cols=222 Identities=13% Similarity=0.011 Sum_probs=145.1
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhh-cCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~-~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
...|+|++|++ ..++++.++++. .+.|+++.+|-..++.. + +..-..-..+. +.+ -.+|.|...+....
T Consensus 130 ~~~d~iwihDy---hl~llp~~lr~~~~~~~i~~f~HipfP~~e-~-~~~lp~~~~ll----~~~-l~~D~igF~t~~~~ 199 (460)
T cd03788 130 RPGDLVWVHDY---HLLLLPQMLRERGPDARIGFFLHIPFPSSE-I-FRCLPWREELL----RGL-LGADLIGFQTERYA 199 (460)
T ss_pred CCCCEEEEeCh---hhhHHHHHHHhhCCCCeEEEEEeCCCCChH-H-HhhCCChHHHH----HHH-hcCCEEEECCHHHH
Confidence 46799999998 445555555543 35788878885321110 0 10000001122 222 24899988887655
Q ss_pred HHHHHh-----------------hCC--cEEEecCC-CCCCcCCCC--hHHHHHHHHHhhhhccCCCCccccccCCCCCC
Q 015058 179 HELAQN-----------------WGI--KATVLYDQ-PPEFFHPTS--LEEKHELFCRLNKILHQPLGVQDCVSNGMEGQ 236 (414)
Q Consensus 179 ~~l~~~-----------------~gi--~i~vI~n~-~~~~f~p~~--~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 236 (414)
..+.+. .|. ++.++||| |++.|.+.. .+.+..+++..
T Consensus 200 ~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~--------------------- 258 (460)
T cd03788 200 RNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELR--------------------- 258 (460)
T ss_pred HHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHHHHH---------------------
Confidence 443331 122 27889999 888886542 11222222111
Q ss_pred CCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCc
Q 015058 237 KADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR 316 (414)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 316 (414)
+..+++ .+|+++||+.+.||++.+++|++.+.++ +|+
T Consensus 259 ---------------~~~~~~-~~il~vgRl~~~Kgi~~ll~A~~~ll~~---------------------------~p~ 295 (460)
T cd03788 259 ---------------ERLGGR-KLIVGVDRLDYSKGIPERLLAFERLLER---------------------------YPE 295 (460)
T ss_pred ---------------HhcCCC-EEEEEecCccccCCHHHHHHHHHHHHHh---------------------------Chh
Confidence 122345 4899999999999999999999988763 454
Q ss_pred ----EEEEEEcC-----CCChHHHHHHHHHc----C-------CCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCC
Q 015058 317 ----LLFIITGK-----GPDKESYEEKIRRL----R-------LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLD 376 (414)
Q Consensus 317 ----i~liI~G~-----G~~~e~l~~~i~~l----~-------l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~ 376 (414)
+.|+++|. |++.+++++.++++ + ...|.|+++.++.++++.+|++||++|+++ ..++
T Consensus 296 ~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS---~~Eg 372 (460)
T cd03788 296 WRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTP---LRDG 372 (460)
T ss_pred hcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCc---cccc
Confidence 67888853 45555565555543 2 235777766899999999999999999764 3578
Q ss_pred CchhHHHHHHcCCe----EEEeeeCC
Q 015058 377 LPMKVCYCWYSRYS----LKLLWTCS 398 (414)
Q Consensus 377 lP~kl~Eama~G~P----vi~s~~~~ 398 (414)
+|.+++||||||+| ||+|+.+|
T Consensus 373 ~~lv~lEAma~g~p~~g~vV~S~~~G 398 (460)
T cd03788 373 MNLVAKEYVACQDDDPGVLILSEFAG 398 (460)
T ss_pred cCcccceeEEEecCCCceEEEecccc
Confidence 99999999999999 99998776
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.2e-17 Score=161.58 Aligned_cols=281 Identities=14% Similarity=0.005 Sum_probs=175.1
Q ss_pred CCCChHHHHHHHHHHhhCCCcEEEEecCCCC-C-C-ccccc---CCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHH
Q 015058 15 LGRSPRMQYQALSLARQMSLEVDVVAYGGSK-P-H-AAILE---HPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQF 88 (414)
Q Consensus 15 ~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~-~-~-~~~~~---~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~ 88 (414)
-.....+.-....|.++.++++.++..+... + . ....+ ..+.++ .+. ... . .+.........+.++
T Consensus 9 r~~~~~~~pl~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~~~~~~~~~~~-~l~--~~~---~--~~~~~~~~~~~~~~l 80 (363)
T cd03786 9 RPEYIKLAPLIRALKKDPGFELVLVVTGQHYDMEMGVTFFEILFIIKPDY-DLL--LGS---D--SQSLGAQTAGLLIGL 80 (363)
T ss_pred CHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCChhhhHHHHHhhCCCCCCE-EEe--cCC---C--CCCHHHHHHHHHHHH
Confidence 3444566677788887558999987766432 1 1 11111 112222 333 110 0 011111112222222
Q ss_pred HHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCC
Q 015058 89 FMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMAN 168 (414)
Q Consensus 89 ~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad 168 (414)
... ++ ..+||+||+|... ...+++.++++..++|++...|+.. + +....... +..+++.+.+|
T Consensus 81 ~~~----l~-~~~pDvV~~~g~~--~~~~~~~~aa~~~~iPvv~~~~g~~-s-----~~~~~~~~----~~r~~~~~~ad 143 (363)
T cd03786 81 EAV----LL-EEKPDLVLVLGDT--NETLAAALAAFKLGIPVAHVEAGLR-S-----FDRGMPDE----ENRHAIDKLSD 143 (363)
T ss_pred HHH----HH-HhCCCEEEEeCCc--hHHHHHHHHHHHcCCCEEEEecccc-c-----CCCCCCch----HHHHHHHHHhh
Confidence 211 22 3699999999642 3445566777778999887666531 1 10111111 11234567899
Q ss_pred EEEEeCHHHHHHHHHhhCCc---EEEecCC--CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCcccee
Q 015058 169 GCLCVTQAMQHELAQNWGIK---ATVLYDQ--PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIF 243 (414)
Q Consensus 169 ~ii~vS~~~~~~l~~~~gi~---i~vI~n~--~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (414)
.++|.|+..++.+.+. |++ +.+++|+ |...+.+.. ......+++
T Consensus 144 ~~~~~s~~~~~~l~~~-G~~~~kI~vign~v~d~~~~~~~~-~~~~~~~~~----------------------------- 192 (363)
T cd03786 144 LHFAPTEEARRNLLQE-GEPPERIFVVGNTMIDALLRLLEL-AKKELILEL----------------------------- 192 (363)
T ss_pred hccCCCHHHHHHHHHc-CCCcccEEEECchHHHHHHHHHHh-hccchhhhh-----------------------------
Confidence 9999999999999865 776 7788887 322221110 000001111
Q ss_pred eeccccccccCCCCCeEEEEeccCCC---CCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEE
Q 015058 244 TSLAGIDVFLKPNRPALVVSSTSWTP---DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI 320 (414)
Q Consensus 244 ~~~~~~~~~l~~~~~~~i~~vgrl~~---~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~li 320 (414)
.+++ +.+.++++.||.+. .|+++.+++|++.+.+ . ++.++
T Consensus 193 -------~~~~-~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~----------------------------~-~~~vi 235 (363)
T cd03786 193 -------LGLL-PKKYILVTLHRVENVDDGEQLEEILEALAELAE----------------------------E-DVPVV 235 (363)
T ss_pred -------cccC-CCCEEEEEeCCccccCChHHHHHHHHHHHHHHh----------------------------c-CCEEE
Confidence 1333 34467889999885 7999999999988753 1 57888
Q ss_pred EEcCCCChHHHHHHHHHcCC--CcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 321 ITGKGPDKESYEEKIRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 321 I~G~G~~~e~l~~~i~~l~l--~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
+.|.|+.++.+++.++++++ .+|+|.| ..+.++++.+|++||++|+++ + + .+.|||++|+|+|++...
T Consensus 236 ~~~~~~~~~~l~~~~~~~~~~~~~v~~~~-~~~~~~~~~l~~~ad~~v~~S----g-g---i~~Ea~~~g~PvI~~~~~ 305 (363)
T cd03786 236 FPNHPRTRPRIREAGLEFLGHHPNVLLIS-PLGYLYFLLLLKNADLVLTDS----G-G---IQEEASFLGVPVLNLRDR 305 (363)
T ss_pred EECCCChHHHHHHHHHhhccCCCCEEEEC-CcCHHHHHHHHHcCcEEEEcC----c-c---HHhhhhhcCCCEEeeCCC
Confidence 88999989999999999887 4999997 678899999999999999642 2 2 368999999999998643
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.2e-16 Score=144.55 Aligned_cols=106 Identities=26% Similarity=0.270 Sum_probs=91.7
Q ss_pred EeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHHHcCCC-
Q 015058 263 SSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLK- 341 (414)
Q Consensus 263 ~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~l~l~- 341 (414)
++|++.+.||++.+++|+..+.++ .|+++|+|+|.++..+..++.+.+++..
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~---------------------------~~~~~~~i~G~~~~~~~~~~~~~~~~~~~ 161 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKER---------------------------GPDLKLVIAGDGPEREYLEELLAALLLLD 161 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHh---------------------------CCCeEEEEEeCCCChHHHHHHHHhcCCcc
Confidence 889999999999999999999763 5789999999999988877767788877
Q ss_pred cEEEecCCC-ChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 342 RVAFRTMWL-SAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 342 ~V~f~g~~v-~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
+|.+.| ++ +.+++..++++||++++++. .+++|++++|||++|+|+|+|+.++.
T Consensus 162 ~v~~~~-~~~~~~~~~~~~~~~di~l~~~~---~e~~~~~~~Eam~~g~pvi~s~~~~~ 216 (229)
T cd01635 162 RVIFLG-GLDPEELLALLLAAADVFVLPSL---REGFGLVVLEAMACGLPVIATDVGGP 216 (229)
T ss_pred cEEEeC-CCCcHHHHHHHhhcCCEEEeccc---ccCcChHHHHHHhCCCCEEEcCCCCc
Confidence 999998 55 67788888888999997643 34789999999999999999998765
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.8e-17 Score=172.01 Aligned_cols=220 Identities=12% Similarity=0.040 Sum_probs=149.9
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhhc-CCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSLR-RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~~-~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
..-|+|.+|+. ..++++.+++... ..++.+-+|-..++. .+ +..-..-..+. +.+ -.||.|...++..+
T Consensus 126 ~~~d~vwvhDY---hl~l~p~~lr~~~~~~~igfFlHipfP~~-e~-f~~lp~r~~il----~gl-l~~dligF~t~~~~ 195 (456)
T TIGR02400 126 QPGDIVWVHDY---HLMLLPAMLRELGVQNKIGFFLHIPFPSS-EI-YRTLPWRRELL----EGL-LAYDLVGFQTYDDA 195 (456)
T ss_pred CCCCEEEEecc---hhhHHHHHHHhhCCCCeEEEEEeCCCCCh-HH-HhhCCcHHHHH----HHH-hcCCEEEECCHHHH
Confidence 34579999987 5556666666654 446666677531111 00 10000001121 222 37999999999888
Q ss_pred HHHHHh----hC------------C--cEEEecCC-CCCCcCCCCh--HH---HHHHHHHhhhhccCCCCccccccCCCC
Q 015058 179 HELAQN----WG------------I--KATVLYDQ-PPEFFHPTSL--EE---KHELFCRLNKILHQPLGVQDCVSNGME 234 (414)
Q Consensus 179 ~~l~~~----~g------------i--~i~vI~n~-~~~~f~p~~~--~~---~~~l~~~l~~~~~~~~~~~~~~~~~~~ 234 (414)
+.+.+. .| . ++.++||| |++.|.|... +. ..++++++
T Consensus 196 ~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~------------------- 256 (456)
T TIGR02400 196 RNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESL------------------- 256 (456)
T ss_pred HHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHc-------------------
Confidence 765531 12 1 27789999 8888876421 11 11233221
Q ss_pred CCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCC
Q 015058 235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY 314 (414)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (414)
+++ .+|+++||+++.||++.+++|++.+.++ +
T Consensus 257 --------------------~~~-~vIl~VgRLd~~KGi~~ll~A~~~ll~~---------------------------~ 288 (456)
T TIGR02400 257 --------------------KGR-KLIIGVDRLDYSKGLPERLLAFERFLEE---------------------------H 288 (456)
T ss_pred --------------------CCC-eEEEEccccccccCHHHHHHHHHHHHHh---------------------------C
Confidence 134 3899999999999999999999998753 4
Q ss_pred Cc----EEEEEE-----cCCCChHHHHHHHHHc--------C-C--CcEEEecCCCChhhHHHHHhhccEEEeeccCCCC
Q 015058 315 PR----LLFIIT-----GKGPDKESYEEKIRRL--------R-L--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG 374 (414)
Q Consensus 315 p~----i~liI~-----G~G~~~e~l~~~i~~l--------~-l--~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g 374 (414)
|+ +.|+++ |+|++.+++++.++++ + + ..|.++++.++.++++.+|++||++|+++ ..
T Consensus 289 p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S---~~ 365 (456)
T TIGR02400 289 PEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTP---LR 365 (456)
T ss_pred ccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECc---cc
Confidence 54 567766 5677878888888776 1 1 13667777899999999999999999753 35
Q ss_pred CCCchhHHHHHHcCCe----EEEeeeCCc
Q 015058 375 LDLPMKVCYCWYSRYS----LKLLWTCSV 399 (414)
Q Consensus 375 ~~lP~kl~Eama~G~P----vi~s~~~~~ 399 (414)
+|+|.+++||||||+| +|+|+.+|.
T Consensus 366 EG~~Lv~lEamA~g~P~~g~vVlS~~~G~ 394 (456)
T TIGR02400 366 DGMNLVAKEYVAAQDPKDGVLILSEFAGA 394 (456)
T ss_pred cccCccHHHHHHhcCCCCceEEEeCCCCC
Confidence 7899999999999999 999998885
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.9e-17 Score=164.14 Aligned_cols=203 Identities=16% Similarity=0.168 Sum_probs=135.2
Q ss_pred cCCCcEEEEeCCCCc--hHHHHHHHHH-hhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCH
Q 015058 99 IASPDVFLVQNPPSV--PTLVAVKWAS-SLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQ 175 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~--~~~~~~~la~-~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~ 175 (414)
..+||+||++.|... +..++..+.. ...++|+++...++.. .. ..|+++.+|.++++|+
T Consensus 98 ~~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~--------~~----------~~w~~~~~d~~~~~s~ 159 (382)
T PLN02605 98 KYKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGT--------CH----------PTWFHKGVTRCFCPSE 159 (382)
T ss_pred hcCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCC--------cC----------cccccCCCCEEEECCH
Confidence 479999999765211 1212221111 1247888877666521 00 1355689999999999
Q ss_pred HHHHHHHHhhCCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeecccccc
Q 015058 176 AMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDV 251 (414)
Q Consensus 176 ~~~~~l~~~~gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (414)
.+++.+.+. |++ +.+++++ +++++.+.. .+.++++++
T Consensus 160 ~~~~~l~~~-g~~~~ki~v~g~~v~~~f~~~~~--~~~~~r~~~------------------------------------ 200 (382)
T PLN02605 160 EVAKRALKR-GLEPSQIRVYGLPIRPSFARAVR--PKDELRREL------------------------------------ 200 (382)
T ss_pred HHHHHHHHc-CCCHHHEEEECcccCHhhccCCC--CHHHHHHHc------------------------------------
Confidence 999998875 775 7777766 444333332 345566554
Q ss_pred ccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEE-EEEEcCCCC-hH
Q 015058 252 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL-FIITGKGPD-KE 329 (414)
Q Consensus 252 ~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~-liI~G~G~~-~e 329 (414)
+++++++ +|+++|+....|++..+++++....... + ...++.+ ++|+|+|+. ++
T Consensus 201 gl~~~~~-~il~~Gg~~g~~~~~~li~~l~~~~~~~----------------------~-~~~~~~~~~vi~G~~~~~~~ 256 (382)
T PLN02605 201 GMDEDLP-AVLLMGGGEGMGPLEETARALGDSLYDK----------------------N-LGKPIGQVVVICGRNKKLQS 256 (382)
T ss_pred CCCCCCc-EEEEECCCcccccHHHHHHHHHHhhccc----------------------c-ccCCCceEEEEECCCHHHHH
Confidence 4556665 8889999999999999999987542100 0 0124554 678898853 44
Q ss_pred HHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 330 SYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 330 ~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
++++. ... +|+|+| + .+|++.+|++||++|+. +| |+++.||||||+|+|+++.
T Consensus 257 ~L~~~----~~~~~v~~~G-~--~~~~~~l~~aaDv~V~~----~g---~~ti~EAma~g~PvI~~~~ 310 (382)
T PLN02605 257 KLESR----DWKIPVKVRG-F--VTNMEEWMGACDCIITK----AG---PGTIAEALIRGLPIILNGY 310 (382)
T ss_pred HHHhh----cccCCeEEEe-c--cccHHHHHHhCCEEEEC----CC---cchHHHHHHcCCCEEEecC
Confidence 44433 334 799998 5 46899999999999952 12 6789999999999999983
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.6e-16 Score=154.83 Aligned_cols=201 Identities=16% Similarity=0.114 Sum_probs=129.8
Q ss_pred hcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHH
Q 015058 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (414)
Q Consensus 98 k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~ 177 (414)
+..+||+||++..++.+..+ +.. .+..|+|+++..|+..+. + ... +. +.+.+.+|.+++.|+..
T Consensus 82 ~~~kPdivi~~~~~~~~~~~-a~~-a~~~~ip~i~~~~~~~~~-----~-~~~---~~-----~~~~~~~d~i~~~~~~~ 145 (380)
T PRK00025 82 LAEPPDVFIGIDAPDFNLRL-EKK-LRKAGIPTIHYVSPSVWA-----W-RQG---RA-----FKIAKATDHVLALFPFE 145 (380)
T ss_pred HHcCCCEEEEeCCCCCCHHH-HHH-HHHCCCCEEEEeCCchhh-----c-Cch---HH-----HHHHHHHhhheeCCccC
Confidence 34799999998754333322 222 344689998766553220 0 011 11 12357889999999999
Q ss_pred HHHHHHhhCCcEEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCC
Q 015058 178 QHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNR 257 (414)
Q Consensus 178 ~~~l~~~~gi~i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 257 (414)
++.+.+ .|.++.++.|.-.+.+.+.. ++.+.++++ ++++++
T Consensus 146 ~~~~~~-~g~~~~~~G~p~~~~~~~~~--~~~~~~~~l------------------------------------~~~~~~ 186 (380)
T PRK00025 146 AAFYDK-LGVPVTFVGHPLADAIPLLP--DRAAARARL------------------------------------GLDPDA 186 (380)
T ss_pred HHHHHh-cCCCeEEECcCHHHhccccc--ChHHHHHHc------------------------------------CCCCCC
Confidence 988876 47775555444112121111 233444443 344556
Q ss_pred CeEEEEecc-CCCC-CChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcC-CCChHHHHHH
Q 015058 258 PALVVSSTS-WTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK-GPDKESYEEK 334 (414)
Q Consensus 258 ~~~i~~vgr-l~~~-Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~-G~~~e~l~~~ 334 (414)
+.++++.|+ ..+. +.++.+++|++.+.+ .+|+++++++|. |+.++++++.
T Consensus 187 ~~il~~~gsr~~~~~~~~~~l~~a~~~l~~---------------------------~~~~~~~ii~~~~~~~~~~~~~~ 239 (380)
T PRK00025 187 RVLALLPGSRGQEIKRLLPPFLKAAQLLQQ---------------------------RYPDLRFVLPLVNPKRREQIEEA 239 (380)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHHH---------------------------hCCCeEEEEecCChhhHHHHHHH
Confidence 544555553 3333 447899999998875 267899999876 6677888888
Q ss_pred HHHc-CCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe
Q 015058 335 IRRL-RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL 394 (414)
Q Consensus 335 i~~l-~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s 394 (414)
++++ ++. +.+. .++++.+|++||++|+++ |...+|||++|+|+|++
T Consensus 240 ~~~~~~~~-v~~~-----~~~~~~~~~~aDl~v~~s--------G~~~lEa~a~G~PvI~~ 286 (380)
T PRK00025 240 LAEYAGLE-VTLL-----DGQKREAMAAADAALAAS--------GTVTLELALLKVPMVVG 286 (380)
T ss_pred HhhcCCCC-eEEE-----cccHHHHHHhCCEEEECc--------cHHHHHHHHhCCCEEEE
Confidence 8887 665 5554 358999999999999742 34678999999999987
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.1e-15 Score=156.13 Aligned_cols=194 Identities=12% Similarity=0.185 Sum_probs=129.2
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
..+||+||++.|. + .+.....++..++|++....++.. .+ +|+++.+|.+++.|+.++
T Consensus 102 ~~kPDvVi~~~p~--~-~~~~l~~~~~~~iP~~~v~td~~~---------~~----------~w~~~~~d~~~v~s~~~~ 159 (391)
T PRK13608 102 KEKPDLILLTFPT--P-VMSVLTEQFNINIPVATVMTDYRL---------HK----------NWITPYSTRYYVATKETK 159 (391)
T ss_pred HhCcCEEEECCcH--H-HHHHHHHhcCCCCCEEEEeCCCCc---------cc----------ccccCCCCEEEECCHHHH
Confidence 4799999998762 2 222122233457898654444310 11 245689999999999999
Q ss_pred HHHHHhhCCc---EEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCC
Q 015058 179 HELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (414)
Q Consensus 179 ~~l~~~~gi~---i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 255 (414)
+.+.+. |++ +.++.|...+.|.+.. .+.+.++++ ++++
T Consensus 160 ~~l~~~-gi~~~ki~v~GiPv~~~f~~~~--~~~~~~~~~------------------------------------~l~~ 200 (391)
T PRK13608 160 QDFIDV-GIDPSTVKVTGIPIDNKFETPI--DQKQWLIDN------------------------------------NLDP 200 (391)
T ss_pred HHHHHc-CCCHHHEEEECeecChHhcccc--cHHHHHHHc------------------------------------CCCC
Confidence 999875 875 6666555334454322 223444343 3556
Q ss_pred CCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEE-cCCC-ChHHHHH
Q 015058 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGP-DKESYEE 333 (414)
Q Consensus 256 ~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~-G~G~-~~e~l~~ 333 (414)
+++.+++++|++...||++.+++++. . ..++++++++ |+++ .+++++
T Consensus 201 ~~~~ilv~~G~lg~~k~~~~li~~~~--~----------------------------~~~~~~~vvv~G~~~~l~~~l~- 249 (391)
T PRK13608 201 DKQTILMSAGAFGVSKGFDTMITDIL--A----------------------------KSANAQVVMICGKSKELKRSLT- 249 (391)
T ss_pred CCCEEEEECCCcccchhHHHHHHHHH--h----------------------------cCCCceEEEEcCCCHHHHHHHH-
Confidence 66667889999999999999999853 1 1356888654 5553 223343
Q ss_pred HHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 334 KIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 334 ~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
+..+.. +|.|+| + .++++.+|++||++|+. + .|..+.|||++|+|+|+++.
T Consensus 250 --~~~~~~~~v~~~G-~--~~~~~~~~~~aDl~I~k---~----gg~tl~EA~a~G~PvI~~~~ 301 (391)
T PRK13608 250 --AKFKSNENVLILG-Y--TKHMNEWMASSQLMITK---P----GGITISEGLARCIPMIFLNP 301 (391)
T ss_pred --HHhccCCCeEEEe-c--cchHHHHHHhhhEEEeC---C----chHHHHHHHHhCCCEEECCC
Confidence 334444 899998 4 57999999999999951 1 25689999999999999864
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.7e-15 Score=152.18 Aligned_cols=209 Identities=14% Similarity=0.052 Sum_probs=134.5
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHH-HHHHHHHHHHHhccCCEEEEeCHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRWIEKYYGKMANGCLCVTQAM 177 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~-~~i~~~~Ek~~~k~ad~ii~vS~~~ 177 (414)
..+||+||+|... ...+++.++++..++|++...++.. + .+....+ .... .+++.+.||.++++|+..
T Consensus 84 ~~~pDiv~~~gd~--~~~la~a~aa~~~~ipv~h~~~g~~-s-----~~~~~~~~~~~~---r~~~~~~ad~~~~~s~~~ 152 (365)
T TIGR00236 84 EEKPDIVLVQGDT--TTTLAGALAAFYLQIPVGHVEAGLR-T-----GDRYSPMPEEIN---RQLTGHIADLHFAPTEQA 152 (365)
T ss_pred HcCCCEEEEeCCc--hHHHHHHHHHHHhCCCEEEEeCCCC-c-----CCCCCCCccHHH---HHHHHHHHHhccCCCHHH
Confidence 4789999999752 4456677888889999875444321 1 1111101 1111 123456799999999999
Q ss_pred HHHHHHhhCCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeecccccccc
Q 015058 178 QHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL 253 (414)
Q Consensus 178 ~~~l~~~~gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 253 (414)
++.+.+. |++ +.+++|+ ....+.+.....+.++++++ +
T Consensus 153 ~~~l~~~-G~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~------------------------------------~- 194 (365)
T TIGR00236 153 KDNLLRE-NVKADSIFVTGNTVIDALLTNVEIAYSSPVLSEF------------------------------------G- 194 (365)
T ss_pred HHHHHHc-CCCcccEEEeCChHHHHHHHHHhhccchhHHHhc------------------------------------C-
Confidence 9999875 875 7889998 22222111111122333221 1
Q ss_pred CCCCCeEEEEeccC-CCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHH
Q 015058 254 KPNRPALVVSSTSW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (414)
Q Consensus 254 ~~~~~~~i~~vgrl-~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~ 332 (414)
.+.+.++++.+|. ...|+++.+++|+..+.++ +|++++++.|.+.. +..+
T Consensus 195 -~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~---------------------------~~~~~~vi~~~~~~-~~~~ 245 (365)
T TIGR00236 195 -EDKRYILLTLHRRENVGEPLENIFKAIREIVEE---------------------------FEDVQIVYPVHLNP-VVRE 245 (365)
T ss_pred -CCCCEEEEecCchhhhhhHHHHHHHHHHHHHHH---------------------------CCCCEEEEECCCCh-HHHH
Confidence 1233455554454 3458999999999988652 67888888764422 2222
Q ss_pred HHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe
Q 015058 333 EKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL 394 (414)
Q Consensus 333 ~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s 394 (414)
++.+.++.. +|.|++ .+...++..+++.||+++.+ + +..+.|||+||+|||++
T Consensus 246 ~~~~~~~~~~~v~~~~-~~~~~~~~~~l~~ad~vv~~---S-----g~~~~EA~a~g~PvI~~ 299 (365)
T TIGR00236 246 PLHKHLGDSKRVHLIE-PLEYLDFLNLAANSHLILTD---S-----GGVQEEAPSLGKPVLVL 299 (365)
T ss_pred HHHHHhCCCCCEEEEC-CCChHHHHHHHHhCCEEEEC---C-----hhHHHHHHHcCCCEEEC
Confidence 344555665 899997 88899999999999999853 2 22479999999999996
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.5e-16 Score=140.57 Aligned_cols=113 Identities=16% Similarity=0.235 Sum_probs=98.3
Q ss_pred CCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHH
Q 015058 257 RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIR 336 (414)
Q Consensus 257 ~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~ 336 (414)
.+.+|+++||+.++||++.+++|+..+.++ ..+++.|+|+|+|+....++..++
T Consensus 14 ~~~~il~~g~~~~~K~~~~li~a~~~l~~~--------------------------~~~~~~l~i~G~~~~~~~~~~~~~ 67 (172)
T PF00534_consen 14 KKKIILFIGRLDPEKGIDLLIEAFKKLKEK--------------------------KNPNYKLVIVGDGEYKKELKNLIE 67 (172)
T ss_dssp TSEEEEEESESSGGGTHHHHHHHHHHHHHH--------------------------HHTTEEEEEESHCCHHHHHHHHHH
T ss_pred CCeEEEEEecCccccCHHHHHHHHHHHHhh--------------------------cCCCeEEEEEcccccccccccccc
Confidence 346999999999999999999999999753 146899999999999999999999
Q ss_pred HcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 337 RLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 337 ~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
.++++ +|.|.| +++.+++..+|+.||++|+++. .+++|.+++|||+||+|||++++++.
T Consensus 68 ~~~~~~~i~~~~-~~~~~~l~~~~~~~di~v~~s~---~e~~~~~~~Ea~~~g~pvI~~~~~~~ 127 (172)
T PF00534_consen 68 KLNLKENIIFLG-YVPDDELDELYKSSDIFVSPSR---NEGFGLSLLEAMACGCPVIASDIGGN 127 (172)
T ss_dssp HTTCGTTEEEEE-SHSHHHHHHHHHHTSEEEE-BS---SBSS-HHHHHHHHTT-EEEEESSTHH
T ss_pred cccccccccccc-cccccccccccccceecccccc---ccccccccccccccccceeeccccCC
Confidence 99997 999997 8888999999999999998754 37899999999999999999996654
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.6e-15 Score=149.84 Aligned_cols=270 Identities=13% Similarity=0.053 Sum_probs=162.7
Q ss_pred HHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 015058 23 YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASP 102 (414)
Q Consensus 23 ~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k~~~~ 102 (414)
..+++|.++ +.++.+++.++.. ..+..-...++++.++ .. ++....+.+..+++.+.+ ..+++ +..+|
T Consensus 23 al~~~l~~~-~~~~~~~g~gg~~-m~~~g~~~~~~~~~l~--v~---G~~~~l~~~~~~~~~~~~----~~~~l-~~~kP 90 (385)
T TIGR00215 23 GLRQQLKEH-YPNARFIGVAGPR-MAAEGCEVLYSMEELS--VM---GLREVLGRLGRLLKIRKE----VVQLA-KQAKP 90 (385)
T ss_pred HHHHHHHhc-CCCcEEEEEccHH-HHhCcCccccChHHhh--hc---cHHHHHHHHHHHHHHHHH----HHHHH-HhcCC
Confidence 566777765 8999999866432 1111001123444443 11 111111122222222222 22222 34799
Q ss_pred cEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHHHHH
Q 015058 103 DVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELA 182 (414)
Q Consensus 103 Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~~l~ 182 (414)
|+|+....|+.+..+ + .+++..|+|+++++.--.+. +..++ -|.+.+.+|.++|.++..++.+.
T Consensus 91 d~vi~~g~~~~~~~~-a-~aa~~~gip~v~~i~P~~wa-----w~~~~---------~r~l~~~~d~v~~~~~~e~~~~~ 154 (385)
T TIGR00215 91 DLLVGIDAPDFNLTK-E-LKKKDPGIKIIYYISPQVWA-----WRKWR---------AKKIEKATDFLLAILPFEKAFYQ 154 (385)
T ss_pred CEEEEeCCCCccHHH-H-HHHhhCCCCEEEEeCCcHhh-----cCcch---------HHHHHHHHhHhhccCCCcHHHHH
Confidence 999999876555432 2 34566799998543111111 11110 24566889999999999988877
Q ss_pred HhhCCcEEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeEEE
Q 015058 183 QNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVV 262 (414)
Q Consensus 183 ~~~gi~i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 262 (414)
+ +|.++.++.|.-.+.+.+... ++.+.++++ +++++++.+++
T Consensus 155 ~-~g~~~~~vGnPv~~~~~~~~~-~~~~~r~~l------------------------------------gl~~~~~~Ilv 196 (385)
T TIGR00215 155 K-KNVPCRFVGHPLLDAIPLYKP-DRKSAREKL------------------------------------GIDHNGETLAL 196 (385)
T ss_pred h-cCCCEEEECCchhhhccccCC-CHHHHHHHc------------------------------------CCCCCCCEEEE
Confidence 5 478877776663222322101 233444443 34556664444
Q ss_pred Eec-cCCC-CCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEE-EcCCCChHHHHHHHHHcC
Q 015058 263 SST-SWTP-DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII-TGKGPDKESYEEKIRRLR 339 (414)
Q Consensus 263 ~vg-rl~~-~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI-~G~G~~~e~l~~~i~~l~ 339 (414)
..| |..+ .|++..+++|++.+.+ ..|++++++ ++.|..++.+++..++++
T Consensus 197 l~GSR~aei~k~~~~ll~a~~~l~~---------------------------~~p~~~~vi~~~~~~~~~~~~~~~~~~~ 249 (385)
T TIGR00215 197 LPGSRGSEVEKLFPLFLKAAQLLEQ---------------------------QEPDLRRVLPVVNFKRRLQFEQIKAEYG 249 (385)
T ss_pred ECCCCHHHHHHhHHHHHHHHHHHHH---------------------------hCCCeEEEEEeCCchhHHHHHHHHHHhC
Confidence 444 6666 6899999999998875 368888866 567777888888888877
Q ss_pred CC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 340 LK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 340 l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
.. +|.+.+ . +.+.+|++||++|+.+ +..++|+|++|+|+|.+.-.+
T Consensus 250 ~~~~v~~~~---~--~~~~~l~aADl~V~~S--------Gt~tlEa~a~G~P~Vv~yk~~ 296 (385)
T TIGR00215 250 PDLQLHLID---G--DARKAMFAADAALLAS--------GTAALEAALIKTPMVVGYRMK 296 (385)
T ss_pred CCCcEEEEC---c--hHHHHHHhCCEEeecC--------CHHHHHHHHcCCCEEEEEcCC
Confidence 76 777765 2 5678999999999753 335679999999999985543
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.3e-15 Score=162.25 Aligned_cols=220 Identities=11% Similarity=0.011 Sum_probs=145.8
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhh-cCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~-~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
..-|+|.+|.. ..+++..++++. .+.++-+-+|-..++..- +..-..-..+.+ .+ -.||.|-..+....
T Consensus 146 ~~~d~vWvhDY---hL~llp~~lR~~~~~~~igfFlHiPFPs~e~--fr~lp~r~~il~----gl-l~aDligF~t~~y~ 215 (797)
T PLN03063 146 EEGDVVWCHDY---HLMFLPQYLKEYNNKMKVGWFLHTPFPSSEI--YKTLPSRSELLR----AV-LTADLIGFHTYDFA 215 (797)
T ss_pred CCCCEEEEecc---hhhhHHHHHHHhCCCCcEEEEecCCCCCHHH--HhhCCCHHHHHH----HH-hcCCEEEeCCHHHH
Confidence 34579999987 555566666654 356666666763221110 100000011222 11 26788888888777
Q ss_pred HHHHHh----------------hCC--cEEEecCC-CCCCcCCCC--hHHHH---HHHHHhhhhccCCCCccccccCCCC
Q 015058 179 HELAQN----------------WGI--KATVLYDQ-PPEFFHPTS--LEEKH---ELFCRLNKILHQPLGVQDCVSNGME 234 (414)
Q Consensus 179 ~~l~~~----------------~gi--~i~vI~n~-~~~~f~p~~--~~~~~---~l~~~l~~~~~~~~~~~~~~~~~~~ 234 (414)
+.+.+. .|. ++.++||| |++.|.+.. ++.+. +++++
T Consensus 216 r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~-------------------- 275 (797)
T PLN03063 216 RHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRF-------------------- 275 (797)
T ss_pred HHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHh--------------------
Confidence 665431 111 27789999 777786542 11111 22222
Q ss_pred CCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCC
Q 015058 235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY 314 (414)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (414)
+ .+++ +|+++||+.+.||++.+|+|++.+.++ +
T Consensus 276 ------------------~-~~~~-lIl~VgRLd~~KGi~~lL~Afe~lL~~---------------------------~ 308 (797)
T PLN03063 276 ------------------F-AGRK-VILGVDRLDMIKGIPQKYLAFEKFLEE---------------------------N 308 (797)
T ss_pred ------------------c-CCCe-EEEEecccccccCHHHHHHHHHHHHHh---------------------------C
Confidence 1 1343 889999999999999999999998753 5
Q ss_pred CcE----EEEEE-----cCCCChHHHHHHHHHcC--CC---------cEEEecCCCChhhHHHHHhhccEEEeeccCCCC
Q 015058 315 PRL----LFIIT-----GKGPDKESYEEKIRRLR--LK---------RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG 374 (414)
Q Consensus 315 p~i----~liI~-----G~G~~~e~l~~~i~~l~--l~---------~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g 374 (414)
|++ .|+++ |+|++.+++++.++++. ++ -|.+++..++.+++..+|++||+||+++ ..
T Consensus 309 P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtS---lr 385 (797)
T PLN03063 309 PEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTS---LR 385 (797)
T ss_pred ccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCc---cc
Confidence 654 34433 46777788888888874 32 2556666889999999999999999753 35
Q ss_pred CCCchhHHHHHHcCCe----EEEeeeCCc
Q 015058 375 LDLPMKVCYCWYSRYS----LKLLWTCSV 399 (414)
Q Consensus 375 ~~lP~kl~Eama~G~P----vi~s~~~~~ 399 (414)
+|++..++||||||.| +|+|..+|.
T Consensus 386 EGmnLv~lEamA~g~p~~gvlVlSe~~G~ 414 (797)
T PLN03063 386 DGMNLVSYEFVACQKAKKGVLVLSEFAGA 414 (797)
T ss_pred cccCcchhhHheeecCCCCCEEeeCCcCc
Confidence 7889999999999999 999999985
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.7e-15 Score=128.03 Aligned_cols=153 Identities=21% Similarity=0.278 Sum_probs=87.9
Q ss_pred hHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhh
Q 015058 19 PRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVK 98 (414)
Q Consensus 19 ~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k 98 (414)
..+...+.+|+++ ||+|+|+++....... .....++.+++++. .... .....+ ..+..+..++ ..+
T Consensus 5 ~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~---~~~~~~----~~~~~~~~~l---~~~ 70 (160)
T PF13579_consen 5 RYVRELARALAAR-GHEVTVVTPQPDPEDD-EEEEDGVRVHRLPL--PRRP---WPLRLL----RFLRRLRRLL---AAR 70 (160)
T ss_dssp HHHHHHHHHHHHT-T-EEEEEEE---GGG--SEEETTEEEEEE----S-SS---SGGGHC----CHHHHHHHHC---HHC
T ss_pred HHHHHHHHHHHHC-CCEEEEEecCCCCccc-ccccCCceEEeccC--Cccc---hhhhhH----HHHHHHHHHH---hhh
Confidence 3566788899996 9999999987654322 23467899999983 2211 111111 1111111111 114
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
..+||+||+|++ ...+++.++++..++|+|+++|+.... ....+..++++++|+++++.||.++++|+.++
T Consensus 71 ~~~~Dvv~~~~~---~~~~~~~~~~~~~~~p~v~~~h~~~~~------~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~ 141 (160)
T PF13579_consen 71 RERPDVVHAHSP---TAGLVAALARRRRGIPLVVTVHGTLFR------RGSRWKRRLYRWLERRLLRRADRVIVVSEAMR 141 (160)
T ss_dssp T---SEEEEEHH---HHHHHHHHHHHHHT--EEEE-SS-T------------HHHHHHHHHHHHHHHH-SEEEESSHHHH
T ss_pred ccCCeEEEeccc---chhHHHHHHHHccCCcEEEEECCCchh------hccchhhHHHHHHHHHHHhcCCEEEECCHHHH
Confidence 589999999996 456667777767799999999986421 11345567788999999999999999999999
Q ss_pred HHHHHhhCCc---EEEecCC
Q 015058 179 HELAQNWGIK---ATVLYDQ 195 (414)
Q Consensus 179 ~~l~~~~gi~---i~vI~n~ 195 (414)
+.+.+ +|.+ +.|||||
T Consensus 142 ~~l~~-~g~~~~ri~vipnG 160 (160)
T PF13579_consen 142 RYLRR-YGVPPDRIHVIPNG 160 (160)
T ss_dssp HHHHH-H---GGGEEE----
T ss_pred HHHHH-hCCCCCcEEEeCcC
Confidence 99998 6875 8999997
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.1e-12 Score=122.32 Aligned_cols=221 Identities=21% Similarity=0.246 Sum_probs=147.0
Q ss_pred CcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCC-CcHHHH-HHHHHHHHHhccCCEEEEeCHHHHH
Q 015058 102 PDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR-RSHFVS-IYRWIEKYYGKMANGCLCVTQAMQH 179 (414)
Q Consensus 102 ~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~-~~~~~~-i~~~~Ek~~~k~ad~ii~vS~~~~~ 179 (414)
+|+++.+.....+............+.+.+..+|............. ...... ...+........++.+++.++...+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLKRLKKALRLLADRVIAVSPALKE 163 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHHHHHHHHhccccccEEEECCHHHHH
Confidence 59998876522222122333344457788888888743211000000 111111 1111111111247899999998866
Q ss_pred HHHHhhCC-cEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCC
Q 015058 180 ELAQNWGI-KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNR 257 (414)
Q Consensus 180 ~l~~~~gi-~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 257 (414)
.....+.. ++.+++|+ +.+.+.+. + ..+.++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------~------------------------------------~~~~~~~ 197 (381)
T COG0438 164 LLEALGVPNKIVVIPNGIDTEKFAPA----------R------------------------------------IGLLPEG 197 (381)
T ss_pred HHHHhCCCCCceEecCCcCHHHcCcc----------c------------------------------------cCCCccc
Confidence 66555333 26677777 44433321 0 0111222
Q ss_pred -CeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCC-hHHHHHHH
Q 015058 258 -PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-KESYEEKI 335 (414)
Q Consensus 258 -~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~-~e~l~~~i 335 (414)
...++++||+.+.||++.+++|+..+.+. .+++.+.++|.|+. .+.+.+.+
T Consensus 198 ~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~---------------------------~~~~~~~~~g~~~~~~~~~~~~~ 250 (381)
T COG0438 198 GKFVVLYVGRLDPEKGLDLLIEAAAKLKKR---------------------------GPDIKLVIVGDGPERREELEKLA 250 (381)
T ss_pred CceEEEEeeccChhcCHHHHHHHHHHhhhh---------------------------cCCeEEEEEcCCCccHHHHHHHH
Confidence 24899999999999999999999999863 44589999999998 47788888
Q ss_pred HHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 336 RRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 336 ~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
++++.. +|.|.| +++.+++..+++.||+++.|+.+ +++|..++|||++|+|||++++++.
T Consensus 251 ~~~~~~~~v~~~g-~~~~~~~~~~~~~~~~~v~ps~~---e~~~~~~~Ea~a~g~pvi~~~~~~~ 311 (381)
T COG0438 251 KKLGLEDNVKFLG-YVPDEELAELLASADVFVLPSLS---EGFGLVLLEAMAAGTPVIASDVGGI 311 (381)
T ss_pred HHhCCCCcEEEec-ccCHHHHHHHHHhCCEEEecccc---ccchHHHHHHHhcCCcEEECCCCCh
Confidence 888886 899986 88988999999999999977432 6788889999999999999998744
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.3e-13 Score=151.88 Aligned_cols=210 Identities=13% Similarity=0.034 Sum_probs=133.3
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhhc-CCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSLR-RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~~-~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
..-|+|.+|+. ..+++..+++... ..++-+-+|-..++... +..-..-..+.+ .+ -.+|.|-..+....
T Consensus 132 ~~~d~vwvhDY---hl~l~p~~lr~~~~~~~igfFlH~pfP~~~~--f~~lp~~~~ll~----~l-l~~Dligf~t~~~~ 201 (726)
T PRK14501 132 RPGDVVWVHDY---QLMLLPAMLRERLPDARIGFFLHIPFPSFEV--FRLLPWREEILE----GL-LGADLIGFHTYDYV 201 (726)
T ss_pred CCCCEEEEeCc---hhhhHHHHHHhhCCCCcEEEEeeCCCCChHH--HhhCCChHHHHH----HH-hcCCeEEeCCHHHH
Confidence 34589999987 5556666666543 44555556653211110 000001011111 12 36888888888865
Q ss_pred HHHHHh----hC------------C--cEEEecCC-CCCCcCCCCh--HHH---HHHHHHhhhhccCCCCccccccCCCC
Q 015058 179 HELAQN----WG------------I--KATVLYDQ-PPEFFHPTSL--EEK---HELFCRLNKILHQPLGVQDCVSNGME 234 (414)
Q Consensus 179 ~~l~~~----~g------------i--~i~vI~n~-~~~~f~p~~~--~~~---~~l~~~l~~~~~~~~~~~~~~~~~~~ 234 (414)
+.+.+. .+ . ++.++||| |++.|.+... +.+ .+++++
T Consensus 202 r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~-------------------- 261 (726)
T PRK14501 202 RHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQD-------------------- 261 (726)
T ss_pred HHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHH--------------------
Confidence 543321 12 1 26789999 8888876421 111 112211
Q ss_pred CCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCC
Q 015058 235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY 314 (414)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (414)
.+++ .+|+++||+.+.||+..+++|++.+.++ +
T Consensus 262 -------------------~~~~-~~il~VgRl~~~Kgi~~~l~A~~~ll~~---------------------------~ 294 (726)
T PRK14501 262 -------------------LRGR-KIILSIDRLDYTKGIPRRLLAFERFLEK---------------------------N 294 (726)
T ss_pred -------------------cCCC-EEEEEecCcccccCHHHHHHHHHHHHHh---------------------------C
Confidence 1244 3899999999999999999999988753 4
Q ss_pred Cc----EEEEEEc----CC-CChHHHHHHHHHc----C-------CCcEEEecCCCChhhHHHHHhhccEEEeeccCCCC
Q 015058 315 PR----LLFIITG----KG-PDKESYEEKIRRL----R-------LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG 374 (414)
Q Consensus 315 p~----i~liI~G----~G-~~~e~l~~~i~~l----~-------l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g 374 (414)
|+ ++|+++| +| ++.+++++.++++ + ...|.+..+.++++|++.+|++||+|++++ ..
T Consensus 295 p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S---~~ 371 (726)
T PRK14501 295 PEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTP---LR 371 (726)
T ss_pred ccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecc---cc
Confidence 54 7888887 44 5555666666554 1 223554445899999999999999999753 45
Q ss_pred CCCchhHHHHHHcCC
Q 015058 375 LDLPMKVCYCWYSRY 389 (414)
Q Consensus 375 ~~lP~kl~Eama~G~ 389 (414)
+|||.+++||||||.
T Consensus 372 EG~~lv~~Eama~~~ 386 (726)
T PRK14501 372 DGMNLVAKEYVASRT 386 (726)
T ss_pred cccCcccceEEEEcC
Confidence 789999999999965
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.9e-12 Score=136.30 Aligned_cols=234 Identities=17% Similarity=0.071 Sum_probs=156.3
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHh----hcCCeEEEEEcCcchhhh-------hhccCCCcHHHHH-------HHHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASS----LRRSAFIVDWHNFGYTLL-------SLSLGRRSHFVSI-------YRWIEK 161 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~----~~~~~~Iv~~H~~~~~l~-------~~~~~~~~~~~~i-------~~~~Ek 161 (414)
..|||||+|++ ++.++..+.+. ...+|.|+|+||+.|.-. .+++ ....... ...++|
T Consensus 129 ~~pDIvH~hDW---qt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgL--p~~~~~~~~l~~~~~~~~lK 203 (487)
T COG0297 129 WLPDIVHAHDW---QTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGL--PFEAYASFGLEFYGQISFLK 203 (487)
T ss_pred CCCCEEEeecH---HHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcC--CHHHhhhceeeecCcchhhh
Confidence 47999999998 77776666665 457899999998744210 0111 1111110 002345
Q ss_pred HHhccCCEEEEeCHHHHHHHHH-hhCC-----------cEEEecCC-CCCCcCCCChH------------HHHHHHHHhh
Q 015058 162 YYGKMANGCLCVTQAMQHELAQ-NWGI-----------KATVLYDQ-PPEFFHPTSLE------------EKHELFCRLN 216 (414)
Q Consensus 162 ~~~k~ad~ii~vS~~~~~~l~~-~~gi-----------~i~vI~n~-~~~~f~p~~~~------------~~~~l~~~l~ 216 (414)
.-.-.||.|.+||+..++++.. .+|. +..-|.|+ |.+.+.|.... .|.+-+..|.
T Consensus 204 ~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~ 283 (487)
T COG0297 204 GGLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQ 283 (487)
T ss_pred hhheeccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHH
Confidence 5556899999999999988762 2221 14556777 66656554321 0111111111
Q ss_pred hhccCCCCccccccCCCCCCCCccceeeeccccccccC--CCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccC
Q 015058 217 KILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK--PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 294 (414)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~ 294 (414)
..++++ .+.| ++..+||++.+||++.+++|+..+.+.
T Consensus 284 --------------------------------~~~gL~~~~~~p-l~~~vsRl~~QKG~dl~~~~i~~~l~~-------- 322 (487)
T COG0297 284 --------------------------------ERLGLDVDLPGP-LFGFVSRLTAQKGLDLLLEAIDELLEQ-------- 322 (487)
T ss_pred --------------------------------HHhCCCCCCCCc-EEEEeeccccccchhHHHHHHHHHHHh--------
Confidence 112333 2345 999999999999999999999988752
Q ss_pred CCchhhhhhhhhcCCccCCCCcEEEEEEcCCC--ChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCC
Q 015058 295 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS 372 (414)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~--~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~ 372 (414)
.++|+|.|.|. .++.+.++++++.- ++... .+.+..-...+++.||+++.| |
T Consensus 323 ---------------------~~~~vilG~gd~~le~~~~~la~~~~~-~~~~~-i~~~~~la~~i~agaD~~lmP---S 376 (487)
T COG0297 323 ---------------------GWQLVLLGTGDPELEEALRALASRHPG-RVLVV-IGYDEPLAHLIYAGADVILMP---S 376 (487)
T ss_pred ---------------------CceEEEEecCcHHHHHHHHHHHHhcCc-eEEEE-eeecHHHHHHHHhcCCEEEeC---C
Confidence 38999999992 23455556665544 45554 366888999999999999987 3
Q ss_pred CCCCCchhHHHHHHcCCeEEEeeeCCcccchhh
Q 015058 373 SGLDLPMKVCYCWYSRYSLKLLWTCSVVGCLFV 405 (414)
Q Consensus 373 ~g~~lP~kl~Eama~G~Pvi~s~~~~~~~~~~~ 405 (414)
..|..+..-++||..|++.|+..|+|..+-++.
T Consensus 377 rfEPcGL~ql~amryGtvpIv~~tGGLadTV~~ 409 (487)
T COG0297 377 RFEPCGLTQLYAMRYGTLPIVRETGGLADTVVD 409 (487)
T ss_pred cCcCCcHHHHHHHHcCCcceEcccCCccceecC
Confidence 466777788999999999999999987665543
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.48 E-value=8.8e-14 Score=119.52 Aligned_cols=100 Identities=23% Similarity=0.318 Sum_probs=74.8
Q ss_pred eEEEEeccCCCCCChHHHHH-HHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHHH
Q 015058 259 ALVVSSTSWTPDEDFGILLE-AALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRR 337 (414)
Q Consensus 259 ~~i~~vgrl~~~Kg~~~Lle-A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~ 337 (414)
..+++.|++.+.||++.+++ |++.++++ .|+++|.|+|.+++ +++++
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~---------------------------~p~~~l~i~G~~~~--~l~~~--- 50 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKEK---------------------------HPDIELIIIGNGPD--ELKRL--- 50 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHHH---------------------------STTEEEEEECESS---HHCCH---
T ss_pred ccccccccccccccccchhhhHHHHHHHH---------------------------CcCEEEEEEeCCHH--HHHHh---
Confidence 47899999999999999999 99999874 68999999999988 24443
Q ss_pred cCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 338 LRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 338 l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
.-++|+|+| ++ ++++.++++||++++|.. .++++|+|++|||++|+|||+++.
T Consensus 51 -~~~~v~~~g-~~--~e~~~~l~~~dv~l~p~~--~~~~~~~k~~e~~~~G~pvi~~~~ 103 (135)
T PF13692_consen 51 -RRPNVRFHG-FV--EELPEILAAADVGLIPSR--FNEGFPNKLLEAMAAGKPVIASDN 103 (135)
T ss_dssp -HHCTEEEE--S---HHHHHHHHC-SEEEE-BS--S-SCC-HHHHHHHCTT--EEEEHH
T ss_pred -cCCCEEEcC-CH--HHHHHHHHhCCEEEEEee--CCCcCcHHHHHHHHhCCCEEECCc
Confidence 122899998 76 689999999999998743 234789999999999999999988
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.4e-13 Score=118.25 Aligned_cols=168 Identities=22% Similarity=0.257 Sum_probs=85.9
Q ss_pred EEeCCCCCChHHHHHHHHHHhh---CCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHH
Q 015058 10 VVLGDLGRSPRMQYQALSLARQ---MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLI 86 (414)
Q Consensus 10 ~~~~d~~~~~r~~~~a~~La~~---~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~ 86 (414)
++...+...+|++.++.+|++. .||+|+++|.....+... ......... .... .......+. ..
T Consensus 3 i~~~~~~~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~----~~~~~~~~~--~~~~--~~~~~~~~~----~~- 69 (177)
T PF13439_consen 3 ITNIFLPNIGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEE----ELVKIFVKI--PYPI--RKRFLRSFF----FM- 69 (177)
T ss_dssp EECC-TTSSSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SS----TEEEE---T--T-SS--TSS--HHHH----HH-
T ss_pred EEEecCCCCChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchh----hccceeeee--eccc--ccccchhHH----HH-
Confidence 3334445667777666555444 599999999876442221 111111111 1111 111111111 11
Q ss_pred HHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhcc
Q 015058 87 QFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKM 166 (414)
Q Consensus 87 ~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ 166 (414)
..++.++ +..+||+||+|.++.. ..+.++.+ ++|++.++|+........ ....+.......++++.+++.
T Consensus 70 ---~~~~~~i-~~~~~DiVh~~~~~~~---~~~~~~~~--~~~~v~~~H~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 139 (177)
T PF13439_consen 70 ---RRLRRLI-KKEKPDIVHIHGPPAF---WIALLACR--KVPIVYTIHGPYFERRFL-KSKLSPYSYLNFRIERKLYKK 139 (177)
T ss_dssp ---HHHHHHH-HHHT-SEEECCTTHCC---CHHHHHHH--CSCEEEEE-HHH--HHTT-TTSCCCHHHHHHCTTHHHHCC
T ss_pred ---HHHHHHH-HHcCCCeEEecccchh---HHHHHhcc--CCCEEEEeCCCccccccc-ccccchhhhhhhhhhhhHHhc
Confidence 1122222 2369999999987322 23333333 899999999975210000 112334445555667777899
Q ss_pred CCEEEEeCHHHHHHHHHhhCCc---EEEecCC-CCCCcC
Q 015058 167 ANGCLCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFH 201 (414)
Q Consensus 167 ad~ii~vS~~~~~~l~~~~gi~---i~vI~n~-~~~~f~ 201 (414)
+|.++|+|+.+++++.+ +|++ +.+|||| |.+.|+
T Consensus 140 ~~~ii~vS~~~~~~l~~-~~~~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 140 ADRIIAVSESTKDELIK-FGIPPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp SSEEEESSHHHHHHHHH-HT--SS-EEE----B-CCCH-
T ss_pred CCEEEEECHHHHHHHHH-hCCcccCCEEEECCccHHHcC
Confidence 99999999999999999 7865 8999999 888773
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.2e-11 Score=130.43 Aligned_cols=111 Identities=15% Similarity=0.030 Sum_probs=88.4
Q ss_pred eEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCc----EEEEEEcCCC-----C--
Q 015058 259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR----LLFIITGKGP-----D-- 327 (414)
Q Consensus 259 ~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----i~liI~G~G~-----~-- 327 (414)
.+|++++|+...||+...++|++.+.++ +|+ +.|+++|.+. +
T Consensus 286 kiIl~VDRLDy~KGI~~kl~Afe~~L~~---------------------------~Pe~~gkv~Lvqi~~psr~~v~~y~ 338 (487)
T TIGR02398 286 KLILSAERVDYTKGILEKLNAYERLLER---------------------------RPELLGKVTLVTACVPAASGMTIYD 338 (487)
T ss_pred eEEEEecccccccCHHHHHHHHHHHHHh---------------------------CccccCceEEEEEeCCCcccchHHH
Confidence 3999999999999999999999998663 564 7899998763 2
Q ss_pred --hHHHHHHHHHc-------CCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCC----eEEEe
Q 015058 328 --KESYEEKIRRL-------RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRY----SLKLL 394 (414)
Q Consensus 328 --~e~l~~~i~~l-------~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~----Pvi~s 394 (414)
++++++.+.+. +...|.+..+.++.+++..+|+.||+++++ +.-.|+-.+..||+||+. |+|.|
T Consensus 339 ~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT---~lrDGmNLVa~Eyva~~~~~~GvLILS 415 (487)
T TIGR02398 339 ELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWIT---PLRDGLNLVAKEYVAAQGLLDGVLVLS 415 (487)
T ss_pred HHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEEC---ccccccCcchhhHHhhhcCCCCCEEEe
Confidence 34555555554 566455555599999999999999999864 334577889999999999 99999
Q ss_pred eeCCc
Q 015058 395 WTCSV 399 (414)
Q Consensus 395 ~~~~~ 399 (414)
...|.
T Consensus 416 efaGa 420 (487)
T TIGR02398 416 EFAGA 420 (487)
T ss_pred ccccc
Confidence 98875
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.2e-10 Score=100.86 Aligned_cols=137 Identities=18% Similarity=0.244 Sum_probs=91.4
Q ss_pred EEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHH
Q 015058 9 VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQF 88 (414)
Q Consensus 9 v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~ 88 (414)
|+.+++. .++.+..++.+|.++ ||+|+++|..... ......+++++++++ .. .+ . .+.++ +.
T Consensus 2 Il~i~~~-~~~~~~~~~~~L~~~-g~~V~ii~~~~~~--~~~~~~~~i~~~~~~--~~-~k----~--~~~~~-~~---- 63 (139)
T PF13477_consen 2 ILLIGNT-PSTFIYNLAKELKKR-GYDVHIITPRNDY--EKYEIIEGIKVIRLP--SP-RK----S--PLNYI-KY---- 63 (139)
T ss_pred EEEEecC-cHHHHHHHHHHHHHC-CCEEEEEEcCCCc--hhhhHhCCeEEEEec--CC-CC----c--cHHHH-HH----
Confidence 4444542 356788999999996 9999999986543 333346789999987 22 11 1 11111 11
Q ss_pred HHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcC-CeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccC
Q 015058 89 FMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRR-SAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMA 167 (414)
Q Consensus 89 ~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~-~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~a 167 (414)
. .+++++ +..+||+||+|.+. +.++++.+++++.+ +|+|++.|+.+. +. .+...++.++++++..++|
T Consensus 64 ~-~l~k~i-k~~~~DvIh~h~~~--~~~~~~~l~~~~~~~~~~i~~~hg~~~------~~-~~~~~~~~~~~~~~~~k~~ 132 (139)
T PF13477_consen 64 F-RLRKII-KKEKPDVIHCHTPS--PYGLFAMLAKKLLKNKKVIYTVHGSDF------YN-SSKKKKLKKFIIKFAFKRA 132 (139)
T ss_pred H-HHHHHh-ccCCCCEEEEecCC--hHHHHHHHHHHHcCCCCEEEEecCCee------ec-CCchHHHHHHHHHHHHHhC
Confidence 1 122333 34789999999872 33566777788888 999999998753 11 1222337788999999999
Q ss_pred CEEEEeC
Q 015058 168 NGCLCVT 174 (414)
Q Consensus 168 d~ii~vS 174 (414)
|.++|.|
T Consensus 133 ~~ii~~~ 139 (139)
T PF13477_consen 133 DKIIVQS 139 (139)
T ss_pred CEEEEcC
Confidence 9999976
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.2e-09 Score=107.77 Aligned_cols=267 Identities=12% Similarity=0.088 Sum_probs=140.0
Q ss_pred CCChHHHHHHHHHHhh---CCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 015058 16 GRSPRMQYQALSLARQ---MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLL 92 (414)
Q Consensus 16 ~~~~r~~~~a~~La~~---~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~ 92 (414)
|+.+|+-+=|.++++. .||+|.+++..... ..++....++.++.++ ....++. .....+..+++.+...+..+
T Consensus 9 GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~-e~~l~~~~g~~~~~~~--~~~l~~~-~~~~~~~~~~~~~~~~~~~~ 84 (352)
T PRK12446 9 GGSAGHVTPNLAIIPYLKEDNWDISYIGSHQGI-EKTIIEKENIPYYSIS--SGKLRRY-FDLKNIKDPFLVMKGVMDAY 84 (352)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCEEEEEECCCcc-ccccCcccCCcEEEEe--ccCcCCC-chHHHHHHHHHHHHHHHHHH
Confidence 3446666655444433 49999999966432 2333334467777776 2221111 01222333334333322222
Q ss_pred HHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEE
Q 015058 93 WFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLC 172 (414)
Q Consensus 93 ~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~ 172 (414)
+++ +..+||+||.+.. ...+.+.+++++.|+|++++-.+... .. .-+.+.+.||.+.+
T Consensus 85 -~i~-~~~kPdvvi~~Gg---y~s~p~~~aa~~~~~p~~i~e~n~~~----------g~-------~nr~~~~~a~~v~~ 142 (352)
T PRK12446 85 -VRI-RKLKPDVIFSKGG---FVSVPVVIGGWLNRVPVLLHESDMTP----------GL-------ANKIALRFASKIFV 142 (352)
T ss_pred -HHH-HhcCCCEEEecCc---hhhHHHHHHHHHcCCCEEEECCCCCc----------cH-------HHHHHHHhhCEEEE
Confidence 222 4589999999864 23334567788899999875444321 11 12345578888876
Q ss_pred eCHHHHHHHHHhhC-CcEEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeecccccc
Q 015058 173 VTQAMQHELAQNWG-IKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDV 251 (414)
Q Consensus 173 vS~~~~~~l~~~~g-i~i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (414)
--+...+ .+. .++.++-|.-.+.|... .+.+.++++
T Consensus 143 ~f~~~~~----~~~~~k~~~tG~Pvr~~~~~~---~~~~~~~~~------------------------------------ 179 (352)
T PRK12446 143 TFEEAAK----HLPKEKVIYTGSPVREEVLKG---NREKGLAFL------------------------------------ 179 (352)
T ss_pred Eccchhh----hCCCCCeEEECCcCCcccccc---cchHHHHhc------------------------------------
Confidence 5544332 222 12433322211223211 122223222
Q ss_pred ccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEE-EEcCCCChHH
Q 015058 252 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI-ITGKGPDKES 330 (414)
Q Consensus 252 ~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~li-I~G~G~~~e~ 330 (414)
++++++|.++++-|+... ..+-+++..+.... ..+++++ ++|+..
T Consensus 180 ~l~~~~~~iLv~GGS~Ga----~~in~~~~~~l~~l--------------------------~~~~~vv~~~G~~~---- 225 (352)
T PRK12446 180 GFSRKKPVITIMGGSLGA----KKINETVREALPEL--------------------------LLKYQIVHLCGKGN---- 225 (352)
T ss_pred CCCCCCcEEEEECCccch----HHHHHHHHHHHHhh--------------------------ccCcEEEEEeCCch----
Confidence 345667777788888864 33334333322110 1135554 467543
Q ss_pred HHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 331 YEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 331 l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
+++...+. .++...+ ++ .++++.+|++||++|+- .| .+.+.|++++|+|.|....
T Consensus 226 ~~~~~~~~--~~~~~~~-f~-~~~m~~~~~~adlvIsr----~G---~~t~~E~~~~g~P~I~iP~ 280 (352)
T PRK12446 226 LDDSLQNK--EGYRQFE-YV-HGELPDILAITDFVISR----AG---SNAIFEFLTLQKPMLLIPL 280 (352)
T ss_pred HHHHHhhc--CCcEEec-ch-hhhHHHHHHhCCEEEEC----CC---hhHHHHHHHcCCCEEEEcC
Confidence 22222221 2334444 42 37899999999999953 11 3468999999999998743
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.2e-08 Score=100.48 Aligned_cols=221 Identities=19% Similarity=0.282 Sum_probs=142.0
Q ss_pred CCCcEEEEeCCCCch-HHHHHHHHHhhcCCeEEEEEcCcchh--hhh-hccC-CCcH-------HHHHHHHHHHHHhccC
Q 015058 100 ASPDVFLVQNPPSVP-TLVAVKWASSLRRSAFIVDWHNFGYT--LLS-LSLG-RRSH-------FVSIYRWIEKYYGKMA 167 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~-~~~~~~la~~~~~~~~Iv~~H~~~~~--l~~-~~~~-~~~~-------~~~i~~~~Ek~~~k~a 167 (414)
.-|||.+=..- ++ +++ ..+++.++|++.-+|-..-+ .+. +... ..+. .++++..+-++.+..|
T Consensus 149 ~~Pdi~IDtMG--Y~fs~p---~~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~lY~~~G~~a 223 (465)
T KOG1387|consen 149 FPPDIFIDTMG--YPFSYP---IFRRLRRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALLYQSAGSKA 223 (465)
T ss_pred CCchheEecCC--CcchhH---HHHHHccCceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHHHHhccccc
Confidence 68998655431 11 222 33557899999888864111 111 1000 0111 1344444446778899
Q ss_pred CEEEEeCHHHHHHHHHhhCCc-EEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeec
Q 015058 168 NGCLCVTQAMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSL 246 (414)
Q Consensus 168 d~ii~vS~~~~~~l~~~~gi~-i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (414)
|.+++.|-=.+..+.+.|+.. ..++|-. -+.+ .+.+..+ +
T Consensus 224 d~vm~NssWT~nHI~qiW~~~~~~iVyPP-------C~~e---~lks~~~-------------------t---------- 264 (465)
T KOG1387|consen 224 DIVMTNSSWTNNHIKQIWQSNTCSIVYPP-------CSTE---DLKSKFG-------------------T---------- 264 (465)
T ss_pred eEEEecchhhHHHHHHHhhccceeEEcCC-------CCHH---HHHHHhc-------------------c----------
Confidence 999999999999999999765 5555422 2211 2222211 0
Q ss_pred cccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcC--
Q 015058 247 AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK-- 324 (414)
Q Consensus 247 ~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~-- 324 (414)
..++...++++|.++|+|++. +|+.+.....+ |--| ..-+.++|+|+|.
T Consensus 265 -------e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~------------------~pl~---a~~~~iKL~ivGScR 315 (465)
T KOG1387|consen 265 -------EGERENQLLSLAQFRPEKNHK-ILQLFALYLKN------------------EPLE---ASVSPIKLIIVGSCR 315 (465)
T ss_pred -------cCCcceEEEEEeecCcccccH-HHHHHHHHHhc------------------Cchh---hccCCceEEEEeccC
Confidence 123335899999999999999 66666655432 0000 1235699999995
Q ss_pred CC-Ch---HHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 325 GP-DK---ESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 325 G~-~~---e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
+. +. +.++.++++|.++ +|+|-- -+|.+|+..+|+.|.++| |+- -.|-|+..+.||||+|+=.|+-+-+
T Consensus 316 neeD~ervk~Lkd~a~~L~i~~~v~F~~-N~Py~~lv~lL~~a~iGv--h~M-wNEHFGIsVVEyMAAGlIpi~h~Sg 389 (465)
T KOG1387|consen 316 NEEDEERVKSLKDLAEELKIPKHVQFEK-NVPYEKLVELLGKATIGV--HTM-WNEHFGISVVEYMAAGLIPIVHNSG 389 (465)
T ss_pred ChhhHHHHHHHHHHHHhcCCccceEEEe-cCCHHHHHHHhccceeeh--hhh-hhhhcchhHHHHHhcCceEEEeCCC
Confidence 32 22 3677788999998 999985 899999999999999999 321 2345778899999999877664433
|
|
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.9e-09 Score=97.77 Aligned_cols=163 Identities=13% Similarity=0.161 Sum_probs=106.9
Q ss_pred CChHHHHHHHHHHhh---CCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 015058 17 RSPRMQYQALSLARQ---MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLW 93 (414)
Q Consensus 17 ~~~r~~~~a~~La~~---~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~ 93 (414)
.-+|.+..+++|+.+ .|++|+|.|.....+ ....+..|+++.++| ....+ ....+.+ -+..+...++
T Consensus 15 ~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~-~~~~~y~gv~l~~i~--~~~~g----~~~si~y---d~~sl~~al~ 84 (185)
T PF09314_consen 15 RYGGFETFVEELAPRLVSKGIDVTVYCRSDYYP-YKEFEYNGVRLVYIP--APKNG----SAESIIY---DFLSLLHALR 84 (185)
T ss_pred ccCcHHHHHHHHHHHHhcCCceEEEEEccCCCC-CCCcccCCeEEEEeC--CCCCC----chHHHHH---HHHHHHHHHH
Confidence 456777777777655 599999999876442 334456899999998 32111 1111111 1111111111
Q ss_pred HHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhc--CCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEE
Q 015058 94 FLCVKIASPDVFLVQNPPSVPTLVAVKWASSLR--RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCL 171 (414)
Q Consensus 94 ~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~--~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii 171 (414)
.......+.||+|++... +..++..++++++ |.|++++.|+..|.- -+.+.+.++++++-|+..-+.||.+|
T Consensus 85 ~~~~~~~~~~ii~ilg~~--~g~~~~~~~r~~~~~g~~v~vN~DGlEWkR----~KW~~~~k~~lk~~E~~avk~ad~lI 158 (185)
T PF09314_consen 85 FIKQDKIKYDIILILGYG--IGPFFLPFLRKLRKKGGKVVVNMDGLEWKR----AKWGRPAKKYLKFSEKLAVKYADRLI 158 (185)
T ss_pred HHhhccccCCEEEEEcCC--ccHHHHHHHHhhhhcCCcEEECCCcchhhh----hhcCHHHHHHHHHHHHHHHHhCCEEE
Confidence 111122468899999762 1234445555543 679999999987621 12344557888888999999999999
Q ss_pred EeCHHHHHHHHHhhC-CcEEEecCC
Q 015058 172 CVTQAMQHELAQNWG-IKATVLYDQ 195 (414)
Q Consensus 172 ~vS~~~~~~l~~~~g-i~i~vI~n~ 195 (414)
|-|+.++++++++|+ .+.++|++|
T Consensus 159 aDs~~I~~y~~~~y~~~~s~~IaYG 183 (185)
T PF09314_consen 159 ADSKGIQDYIKERYGRKKSTFIAYG 183 (185)
T ss_pred EcCHHHHHHHHHHcCCCCcEEecCC
Confidence 999999999999999 678888877
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.06 E-value=6.7e-08 Score=98.71 Aligned_cols=255 Identities=19% Similarity=0.125 Sum_probs=138.9
Q ss_pred HHHHHHhhCCCc-EEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 015058 24 QALSLARQMSLE-VDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASP 102 (414)
Q Consensus 24 ~a~~La~~~g~e-V~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k~~~~ 102 (414)
.++.|.++ |++ |.++...... ...+....+++++.++ ....++... ...+...++.+...+.. .+++ +..+|
T Consensus 20 l~~~l~~~-g~~~v~~~~~~~~~-e~~l~~~~~~~~~~I~--~~~~~~~~~-~~~~~~~~~~~~~~~~a-~~il-~~~kP 92 (357)
T COG0707 20 LAEELAKR-GWEQVIVLGTGDGL-EAFLVKQYGIEFELIP--SGGLRRKGS-LKLLKAPFKLLKGVLQA-RKIL-KKLKP 92 (357)
T ss_pred HHHHHHhh-CccEEEEecccccc-eeeeccccCceEEEEe--cccccccCc-HHHHHHHHHHHHHHHHH-HHHH-HHcCC
Confidence 44566665 996 5555443322 2233344588999998 333322221 11222222322221111 1222 34899
Q ss_pred cEEEEeCC-CCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHHHH
Q 015058 103 DVFLVQNP-PSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181 (414)
Q Consensus 103 Dvvh~~~p-p~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~~l 181 (414)
|+|+.... ++.|. .++++..|+|++++..|... |.. .++..+.|+.|.+.-+...
T Consensus 93 d~vig~Ggyvs~P~----~~Aa~~~~iPv~ihEqn~~~-------G~a----------nk~~~~~a~~V~~~f~~~~--- 148 (357)
T COG0707 93 DVVIGTGGYVSGPV----GIAAKLLGIPVIIHEQNAVP-------GLA----------NKILSKFAKKVASAFPKLE--- 148 (357)
T ss_pred CEEEecCCccccHH----HHHHHhCCCCEEEEecCCCc-------chh----------HHHhHHhhceeeecccccc---
Confidence 99988643 34433 34566788999987766532 111 1344566777766555411
Q ss_pred HHhhC-CcEEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeE
Q 015058 182 AQNWG-IKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPAL 260 (414)
Q Consensus 182 ~~~~g-i~i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 260 (414)
.... -++.+.-|.....|.... . .+.+.. ...+++.+
T Consensus 149 -~~~~~~~~~~tG~Pvr~~~~~~~-~--~~~~~~--------------------------------------~~~~~~~i 186 (357)
T COG0707 149 -AGVKPENVVVTGIPVRPEFEELP-A--AEVRKD--------------------------------------GRLDKKTI 186 (357)
T ss_pred -ccCCCCceEEecCcccHHhhccc-h--hhhhhh--------------------------------------ccCCCcEE
Confidence 1111 124444444222232211 1 111100 01145567
Q ss_pred EEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEE-EEEcCCCChHHHHHHHHHcC
Q 015058 261 VVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKGPDKESYEEKIRRLR 339 (414)
Q Consensus 261 i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~l-iI~G~G~~~e~l~~~i~~l~ 339 (414)
+++-|+...+ .+-+++..+.... ..++++ .++|++. .+++++.-++++
T Consensus 187 lV~GGS~Ga~----~ln~~v~~~~~~l--------------------------~~~~~v~~~~G~~~-~~~~~~~~~~~~ 235 (357)
T COG0707 187 LVTGGSQGAK----ALNDLVPEALAKL--------------------------ANRIQVIHQTGKND-LEELKSAYNELG 235 (357)
T ss_pred EEECCcchhH----HHHHHHHHHHHHh--------------------------hhCeEEEEEcCcch-HHHHHHHHhhcC
Confidence 7888887544 4444444433210 114665 4577776 677777777777
Q ss_pred CCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe
Q 015058 340 LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL 394 (414)
Q Consensus 340 l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s 394 (414)
. +...+ ..+|++.+|++||+.||-. | .+.+.|+.++|+|+|.-
T Consensus 236 ~--~~v~~---f~~dm~~~~~~ADLvIsRa----G---a~Ti~E~~a~g~P~Ili 278 (357)
T COG0707 236 V--VRVLP---FIDDMAALLAAADLVISRA----G---ALTIAELLALGVPAILV 278 (357)
T ss_pred c--EEEee---HHhhHHHHHHhccEEEeCC----c---ccHHHHHHHhCCCEEEe
Confidence 6 77777 7889999999999999632 2 34689999999999963
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=1e-08 Score=115.31 Aligned_cols=218 Identities=10% Similarity=-0.009 Sum_probs=135.7
Q ss_pred CCcEEEEeCCCCchHHHHHHHHHhhc-CCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHh--ccCCEEEEeCHHH
Q 015058 101 SPDVFLVQNPPSVPTLVAVKWASSLR-RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYG--KMANGCLCVTQAM 177 (414)
Q Consensus 101 ~~Dvvh~~~pp~~~~~~~~~la~~~~-~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~--k~ad~ii~vS~~~ 177 (414)
.-|+|.+|+. ..+++..+++... ..++-+-+|-..++. -+.+.+.|=+..+. =.||.|-..+...
T Consensus 231 ~gD~VWVHDY---HL~LlP~~LR~~~p~~~IGfFlHiPFPs~---------Eifr~LP~r~elL~glL~aDlIGFqT~~y 298 (934)
T PLN03064 231 EGDVVWCHDY---HLMFLPKCLKEYNSNMKVGWFLHTPFPSS---------EIHRTLPSRSELLRSVLAADLVGFHTYDY 298 (934)
T ss_pred CCCEEEEecc---hhhHHHHHHHHhCCCCcEEEEecCCCCCh---------HHHhhCCcHHHHHHHHhcCCeEEeCCHHH
Confidence 4479999987 5555666666543 455555566532111 11111111111111 2689999999988
Q ss_pred HHHHHHh----hCCc--------------EEEecCC-CCCCcCCC--ChH---HHHHHHHHhhhhccCCCCccccccCCC
Q 015058 178 QHELAQN----WGIK--------------ATVLYDQ-PPEFFHPT--SLE---EKHELFCRLNKILHQPLGVQDCVSNGM 233 (414)
Q Consensus 178 ~~~l~~~----~gi~--------------i~vI~n~-~~~~f~p~--~~~---~~~~l~~~l~~~~~~~~~~~~~~~~~~ 233 (414)
++.+.+- .|.. +.+.|-| |++.|... +++ ...++++++
T Consensus 299 ~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~------------------ 360 (934)
T PLN03064 299 ARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERF------------------ 360 (934)
T ss_pred HHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHh------------------
Confidence 7765431 1211 3455666 66666432 111 112333332
Q ss_pred CCCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCC
Q 015058 234 EGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYL 313 (414)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (414)
. ++ .+|++++|+.+.||+...++|++.+.++
T Consensus 361 --------------------~-g~-kiIlgVDRLD~~KGI~~kL~AfE~fL~~--------------------------- 391 (934)
T PLN03064 361 --------------------A-GR-KVMLGVDRLDMIKGIPQKILAFEKFLEE--------------------------- 391 (934)
T ss_pred --------------------C-Cc-eEEEEeeccccccCHHHHHHHHHHHHHh---------------------------
Confidence 1 34 3999999999999999999999987653
Q ss_pred CCcEE--EEEE-------cCCCChHHHHHHHHH----cC-------CCcEEEecCCCChhhHHHHHhhccEEEeeccCCC
Q 015058 314 YPRLL--FIIT-------GKGPDKESYEEKIRR----LR-------LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS 373 (414)
Q Consensus 314 ~p~i~--liI~-------G~G~~~e~l~~~i~~----l~-------l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~ 373 (414)
+|+.+ ++++ |++++.+++++.+.+ .+ ..-|.++...++.+++..+|+.||+++++ +.
T Consensus 392 ~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvT---sl 468 (934)
T PLN03064 392 NPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVT---SL 468 (934)
T ss_pred CccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeC---cc
Confidence 56643 4444 677776666555544 22 12366665568999999999999999964 33
Q ss_pred CCCCchhHHHHHHcCC----eEEEeeeCCcc
Q 015058 374 GLDLPMKVCYCWYSRY----SLKLLWTCSVV 400 (414)
Q Consensus 374 g~~lP~kl~Eama~G~----Pvi~s~~~~~~ 400 (414)
-+|+.....|||+|+. ++|.|...|.-
T Consensus 469 rDGmNLva~Eyva~~~~~~GvLILSEfaGaa 499 (934)
T PLN03064 469 RDGMNLVSYEFVACQDSKKGVLILSEFAGAA 499 (934)
T ss_pred ccccCchHHHHHHhhcCCCCCeEEeCCCchH
Confidence 4677888999999954 45558888765
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.9e-08 Score=105.74 Aligned_cols=195 Identities=14% Similarity=0.055 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHhccCCEEEEeCHHHHHHHHHhh---CCc-EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccc
Q 015058 153 VSIYRWIEKYYGKMANGCLCVTQAMQHELAQNW---GIK-ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQD 227 (414)
Q Consensus 153 ~~i~~~~Ek~~~k~ad~ii~vS~~~~~~l~~~~---gi~-i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~ 227 (414)
...+.++|-.....+|.+++.|.-.+......+ +.. +++.|-. +.+.+.+.--+.+.+.+
T Consensus 196 ~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d~~~~y~ei~~s~~~~~~~~~~~~~~--------------- 260 (495)
T KOG0853|consen 196 RHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSDITSTYPEIDGSWFTYGQYESHLELR--------------- 260 (495)
T ss_pred hhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCCcceeeccccchhccccccccchhcc---------------
Confidence 344566666666789999999887776554432 111 4555444 33333331111111111
Q ss_pred cccCCCCCCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhc
Q 015058 228 CVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEIS 307 (414)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 307 (414)
...+...+....+ .+.....++.|.||++.+++|+..+....+
T Consensus 261 -----------------~~~r~~~~v~~~d-~~~~siN~~~pgkd~~l~l~a~~~~~~~i~------------------- 303 (495)
T KOG0853|consen 261 -----------------LPVRLYRGVSGID-RFFPSINRFEPGKDQDLALPAFTLLHDSIP------------------- 303 (495)
T ss_pred -----------------cccceeeeecccc-eEeeeeeecCCCCCceeehhhHHhhhcccC-------------------
Confidence 1111112222212 467788899999999999999998876421
Q ss_pred CCccCCCCcEEEEEEcC-CC---------ChHHHHHHHHHcCC-C-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCC
Q 015058 308 DGKQYLYPRLLFIITGK-GP---------DKESYEEKIRRLRL-K-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGL 375 (414)
Q Consensus 308 ~~~~~~~p~i~liI~G~-G~---------~~e~l~~~i~~l~l-~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~ 375 (414)
++..++.+++++|+ |- ..+++.++++++++ + .|.|+. +..+...|..+||.-+..++ +.+|
T Consensus 304 ---~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~---s~~~~~~yrl~adt~~v~~q-Pa~E 376 (495)
T KOG0853|consen 304 ---EPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLLGQFVWFLP---STTRVAKYRLAADTKGVLYQ-PANE 376 (495)
T ss_pred ---CCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCccCceEEEec---CCchHHHHHHHHhcceEEec-CCCC
Confidence 12456789999983 21 23578889999998 3 788876 66677778888887654444 3458
Q ss_pred CCchhHHHHHHcCCeEEEeeeCC--------cccchhhh
Q 015058 376 DLPMKVCYCWYSRYSLKLLWTCS--------VVGCLFVL 406 (414)
Q Consensus 376 ~lP~kl~Eama~G~Pvi~s~~~~--------~~~~~~~~ 406 (414)
.|+...+||||||+||+|++.+| ++|.|...
T Consensus 377 ~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp 415 (495)
T KOG0853|consen 377 HFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP 415 (495)
T ss_pred CccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC
Confidence 89999999999999999988776 56776543
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.00 E-value=6.4e-09 Score=110.96 Aligned_cols=112 Identities=19% Similarity=0.141 Sum_probs=93.4
Q ss_pred EEEEec--cCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCCh---HHHHHH
Q 015058 260 LVVSST--SWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK---ESYEEK 334 (414)
Q Consensus 260 ~i~~vg--rl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~---e~l~~~ 334 (414)
.+++++ |+ ++|.++.+|+|+..+.+ +.|+++|.+.|.|... +.+++.
T Consensus 321 ~~I~v~idrL-~ek~~~~~I~av~~~~~---------------------------~~p~~~L~~~gy~~~~~~~~~l~~~ 372 (519)
T TIGR03713 321 TEIGFWIDGL-SDEELQQILQQLLQYIL---------------------------KNPDYELKILTYNNDNDITQLLEDI 372 (519)
T ss_pred eEEEEEcCCC-ChHHHHHHHHHHHHHHh---------------------------hCCCeEEEEEEecCchhHHHHHHHH
Confidence 677888 99 99999999999999976 4899999999988654 667777
Q ss_pred HHHcCCC------------------------------cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHH
Q 015058 335 IRRLRLK------------------------------RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYC 384 (414)
Q Consensus 335 i~~l~l~------------------------------~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Ea 384 (414)
+++++++ +|+|.| +.+.+|+...|+.|.++|.++ ..+|++ .++||
T Consensus 373 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~g-y~~e~dl~~~~~~arl~id~s---~~eg~~-~~ieA 447 (519)
T TIGR03713 373 LEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERIAFTT-LTNEEDLISALDKLRLIIDLS---KEPDLY-TQISG 447 (519)
T ss_pred HHHHHhhhchhhhccccchhhhhhhcccchhhcccccEEEEEe-cCCHHHHHHHHhhheEEEECC---CCCChH-HHHHH
Confidence 7777555 899997 767779999999999999653 346889 99999
Q ss_pred HHcCCeEEE-----eeeCCcccchh
Q 015058 385 WYSRYSLKL-----LWTCSVVGCLF 404 (414)
Q Consensus 385 ma~G~Pvi~-----s~~~~~~~~~~ 404 (414)
+++|+|+|- ....|.+|.|+
T Consensus 448 iS~GiPqInyg~~~~V~d~~NG~li 472 (519)
T TIGR03713 448 ISAGIPQINKVETDYVEHNKNGYII 472 (519)
T ss_pred HHcCCCeeecCCceeeEcCCCcEEe
Confidence 999999994 34678899983
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.5e-07 Score=97.17 Aligned_cols=279 Identities=13% Similarity=0.101 Sum_probs=155.9
Q ss_pred ChHHHHHHHHHHhh-CCCcEE---EEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCC--chHHHHHHHH-HHHHHHH
Q 015058 18 SPRMQYQALSLARQ-MSLEVD---VVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPK--VLKPVLLLLK-PLIQFFM 90 (414)
Q Consensus 18 ~~r~~~~a~~La~~-~g~eV~---vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~--~~~~~~~l~k-~l~~~~~ 90 (414)
+--....++.|.++ .|++|. +|+.+... ........+ +++.+| . .++.+ ....+..+++ .+...+
T Consensus 10 d~~a~ai~~~l~~~~~~~~v~~~p~vG~~~~~-e~~~ip~~g-~~~~~~--s---gg~~~~~~~~~~~~~~~gl~~~~~- 81 (396)
T TIGR03492 10 DLIAARIAKALLQLSPDLNLEALPLVGEGRAY-QNLGIPIIG-PTKELP--S---GGFSYQSLRGLLRDLRAGLVGLTL- 81 (396)
T ss_pred HHHHHHHHHHHHhhCCCCCeEEeCcccCCHHH-hhCCCceeC-CCCCCC--C---CCccCCCHHHHHHHHHhhHHHHHH-
Confidence 33344566777662 499999 77655432 111112222 444554 2 22321 1122222222 111111
Q ss_pred HHHHHhhh-cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEE-EEcCcchhhhhh-ccCCCcHHH-----HHHHHHH--
Q 015058 91 LLWFLCVK-IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV-DWHNFGYTLLSL-SLGRRSHFV-----SIYRWIE-- 160 (414)
Q Consensus 91 l~~~l~~k-~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv-~~H~~~~~l~~~-~~~~~~~~~-----~i~~~~E-- 160 (414)
.-|++.++ .++||+|++-.- . +..+++++.|+|+++ -.|...+.+.+- .......+. ....| |
T Consensus 82 ~~~~~~~~~~~~p~~v~~~Gg-----~-v~~~aA~~~~~p~~~~~~~esn~~~~~~~~~~~~~~~~~~~G~~~~p~-e~n 154 (396)
T TIGR03492 82 GQWRALRKWAKKGDLIVAVGD-----I-VPLLFAWLSGKPYAFVGTAKSDYYWESGPRRSPSDEYHRLEGSLYLPW-ERW 154 (396)
T ss_pred HHHHHHHHHhhcCCEEEEECc-----H-HHHHHHHHcCCCceEEEeeccceeecCCCCCccchhhhccCCCccCHH-HHH
Confidence 11222222 139999988853 1 255566778999866 345443321000 000000000 01122 3
Q ss_pred HHHhccCCEEEEeCHHHHHHHHHhhCCcEEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCcc
Q 015058 161 KYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240 (414)
Q Consensus 161 k~~~k~ad~ii~vS~~~~~~l~~~~gi~i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (414)
+...+.||.+.+-.+...+.+.+ +|+++.++=|.-.+.+.+.. +.
T Consensus 155 ~l~~~~a~~v~~~~~~t~~~l~~-~g~k~~~vGnPv~d~l~~~~---~~------------------------------- 199 (396)
T TIGR03492 155 LMRSRRCLAVFVRDRLTARDLRR-QGVRASYLGNPMMDGLEPPE---RK------------------------------- 199 (396)
T ss_pred HhhchhhCEEeCCCHHHHHHHHH-CCCeEEEeCcCHHhcCcccc---cc-------------------------------
Confidence 56668999999999999999876 48887766554212121111 00
Q ss_pred ceeeeccccccccCCCCCeEEEEeccCCC--CCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEE
Q 015058 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTP--DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL 318 (414)
Q Consensus 241 ~~~~~~~~~~~~l~~~~~~~i~~vgrl~~--~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~ 318 (414)
+++++.+.+++..|+-.+ .+++..+++|++.+.+ . +++.
T Consensus 200 -----------~l~~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~---------------------------~-~~~~ 240 (396)
T TIGR03492 200 -----------PLLTGRFRIALLPGSRPPEAYRNLKLLLRALEALPD---------------------------S-QPFV 240 (396)
T ss_pred -----------ccCCCCCEEEEECCCCHHHHHccHHHHHHHHHHHhh---------------------------C-CCeE
Confidence 122344456666666633 3466789999988854 2 5677
Q ss_pred EEE-EcCCCChHHHHHHHHHcCCC---------------cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHH
Q 015058 319 FII-TGKGPDKESYEEKIRRLRLK---------------RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVC 382 (414)
Q Consensus 319 liI-~G~G~~~e~l~~~i~~l~l~---------------~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~ 382 (414)
|++ +..+.+.+.+++..++.++. ++.+.. ..+|++.+|++||+.|+. +| ....
T Consensus 241 ~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~---~~~~~~~~l~~ADlvI~r----SG----t~T~ 309 (396)
T TIGR03492 241 FLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLL---GRGAFAEILHWADLGIAM----AG----TATE 309 (396)
T ss_pred EEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCceEEEe---chHhHHHHHHhCCEEEEC----cC----HHHH
Confidence 765 43566778888888776664 256654 567899999999999964 23 3569
Q ss_pred HHHHcCCeEEEeee
Q 015058 383 YCWYSRYSLKLLWT 396 (414)
Q Consensus 383 Eama~G~Pvi~s~~ 396 (414)
|++++|+|+|....
T Consensus 310 E~a~lg~P~Ilip~ 323 (396)
T TIGR03492 310 QAVGLGKPVIQLPG 323 (396)
T ss_pred HHHHhCCCEEEEeC
Confidence 99999999999763
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.88 E-value=9.7e-07 Score=90.16 Aligned_cols=293 Identities=16% Similarity=0.085 Sum_probs=151.5
Q ss_pred EEEEEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCCCCC-----cccccCCCeEEEEeecCCCCCCCCCCchHHHHH
Q 015058 6 RACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPH-----AAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLL 80 (414)
Q Consensus 6 ~~~v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~-----~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~ 80 (414)
++++++.+ -..-..|.-....|.+..++++.++..+..... ....+..++.+..-. ....... ..-.....
T Consensus 2 ki~~v~Gt-Rpe~iklapv~~~l~~~~~~~~~lv~tGqH~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~ 77 (365)
T TIGR03568 2 KICVVTGT-RADYGLLRPLLKALQDDPDLELQLIVTGMHLSPEYGNTVNEIEKDGFDIDEKI--EILLDSD-SNAGMAKS 77 (365)
T ss_pred eEEEEEec-ChhHHHHHHHHHHHhcCCCCcEEEEEeCCCCChhhccHHHHHHHcCCCCCCcc--ccccCCC-CCCCHHHH
Confidence 34444433 444456666778887744789888876653211 111222333331111 0000000 00011122
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHH
Q 015058 81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIE 160 (414)
Q Consensus 81 l~k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~E 160 (414)
....+..+-.++ +..+||+|+++... .+.+++.+++..+++|++. +|.-..+ ++. .--.. .
T Consensus 78 ~~~~~~~~~~~~-----~~~~Pd~vlv~GD~--~~~la~alaA~~~~IPv~H-veaG~rs-----~~~---~eE~~---r 138 (365)
T TIGR03568 78 MGLTIIGFSDAF-----ERLKPDLVVVLGDR--FEMLAAAIAAALLNIPIAH-IHGGEVT-----EGA---IDESI---R 138 (365)
T ss_pred HHHHHHHHHHHH-----HHhCCCEEEEeCCc--hHHHHHHHHHHHhCCcEEE-EECCccC-----CCC---chHHH---H
Confidence 222233322222 23799999999752 4456677888889999973 3332111 111 11111 1
Q ss_pred HHHhccCCEEEEeCHHHHHHHHHhhCCc---EEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCC
Q 015058 161 KYYGKMANGCLCVTQAMQHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQK 237 (414)
Q Consensus 161 k~~~k~ad~ii~vS~~~~~~l~~~~gi~---i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 237 (414)
+...+.||..++.++..++.|.+. |.+ +.++-|...+.+.......+.++.+++
T Consensus 139 ~~i~~la~l~f~~t~~~~~~L~~e-g~~~~~i~~tG~~~iD~l~~~~~~~~~~~~~~l---------------------- 195 (365)
T TIGR03568 139 HAITKLSHLHFVATEEYRQRVIQM-GEDPDRVFNVGSPGLDNILSLDLLSKEELEEKL---------------------- 195 (365)
T ss_pred HHHHHHHhhccCCCHHHHHHHHHc-CCCCCcEEEECCcHHHHHHhhhccCHHHHHHHh----------------------
Confidence 344577888899999999988764 764 555544422222111000123344333
Q ss_pred CccceeeeccccccccCCCCCeEEEEeccCC--CCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCC
Q 015058 238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWT--PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP 315 (414)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~--~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 315 (414)
+++++++++++..-+-+ ...+.+.+.+.++.+.+. ..
T Consensus 196 --------------gl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~---------------------------~~ 234 (365)
T TIGR03568 196 --------------GIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDEL---------------------------NK 234 (365)
T ss_pred --------------CCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHh---------------------------cc
Confidence 23333344444443322 333334444444444331 11
Q ss_pred cEEEEEEcCCCChHHHHHHHHHcC--CCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEE
Q 015058 316 RLLFIITGKGPDKESYEEKIRRLR--LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKL 393 (414)
Q Consensus 316 ~i~liI~G~G~~~e~l~~~i~~l~--l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~ 393 (414)
++.++.-..+|..+.+.+.++++. ..+|.+.+ .++..++..+++.||++|. .+++ + +-||.+.|+|+|.
T Consensus 235 ~~~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~-~l~~~~~l~Ll~~a~~vit---dSSg---g--i~EA~~lg~Pvv~ 305 (365)
T TIGR03568 235 NYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFK-SLGQERYLSLLKNADAVIG---NSSS---G--IIEAPSFGVPTIN 305 (365)
T ss_pred CCEEEEeCCCCCchHHHHHHHHHhcCCCCEEEEC-CCChHHHHHHHHhCCEEEE---cChh---H--HHhhhhcCCCEEe
Confidence 343333223354444555555543 34899997 8899999999999999994 2222 1 4799999999997
Q ss_pred e
Q 015058 394 L 394 (414)
Q Consensus 394 s 394 (414)
.
T Consensus 306 l 306 (365)
T TIGR03568 306 I 306 (365)
T ss_pred e
Confidence 3
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.79 E-value=5.7e-07 Score=88.39 Aligned_cols=89 Identities=21% Similarity=0.280 Sum_probs=62.8
Q ss_pred CCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHH
Q 015058 257 RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIR 336 (414)
Q Consensus 257 ~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~ 336 (414)
.+.++++.|..... .++++++. .|+..++++|.+....
T Consensus 192 ~~~iLv~~gg~~~~----~~~~~l~~-------------------------------~~~~~~~v~g~~~~~~------- 229 (318)
T PF13528_consen 192 EPKILVYFGGGGPG----DLIEALKA-------------------------------LPDYQFIVFGPNAADP------- 229 (318)
T ss_pred CCEEEEEeCCCcHH----HHHHHHHh-------------------------------CCCCeEEEEcCCcccc-------
Confidence 34588898888655 55666554 3567888887663111
Q ss_pred HcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 337 RLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 337 ~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
...||++.+ + ..++++.+|++||+.|+. .|. +.+.|++++|+|++..-..+
T Consensus 230 --~~~ni~~~~-~-~~~~~~~~m~~ad~vIs~----~G~---~t~~Ea~~~g~P~l~ip~~~ 280 (318)
T PF13528_consen 230 --RPGNIHVRP-F-STPDFAELMAAADLVISK----GGY---TTISEALALGKPALVIPRPG 280 (318)
T ss_pred --cCCCEEEee-c-ChHHHHHHHHhCCEEEEC----CCH---HHHHHHHHcCCCEEEEeCCC
Confidence 134899886 2 348999999999999953 232 35899999999999877643
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.1e-06 Score=84.59 Aligned_cols=96 Identities=17% Similarity=0.151 Sum_probs=72.9
Q ss_pred eEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCC-CChHHHHHHHHH
Q 015058 259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKESYEEKIRR 337 (414)
Q Consensus 259 ~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G-~~~e~l~~~i~~ 337 (414)
.++++.|...+.+....+++++..... ..++. +|+|.| +..+++++.++.
T Consensus 172 ~iLi~~GG~d~~~~~~~~l~~l~~~~~----------------------------~~~i~-vv~G~~~~~~~~l~~~~~~ 222 (279)
T TIGR03590 172 RVLVSFGGADPDNLTLKLLSALAESQI----------------------------NISIT-LVTGSSNPNLDELKKFAKE 222 (279)
T ss_pred eEEEEeCCcCCcCHHHHHHHHHhcccc----------------------------CceEE-EEECCCCcCHHHHHHHHHh
Confidence 478888888887766777887765421 11233 478877 677888888776
Q ss_pred cCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 338 LRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 338 l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
. .+|.+.+ +.++++.+|+.||++|+. .| +.++|++++|+|+|+..+
T Consensus 223 ~--~~i~~~~---~~~~m~~lm~~aDl~Is~----~G----~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 223 Y--PNIILFI---DVENMAELMNEADLAIGA----AG----STSWERCCLGLPSLAICL 268 (279)
T ss_pred C--CCEEEEe---CHHHHHHHHHHCCEEEEC----Cc----hHHHHHHHcCCCEEEEEe
Confidence 3 3788888 889999999999999963 12 468999999999998755
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=98.73 E-value=9.6e-07 Score=95.89 Aligned_cols=126 Identities=10% Similarity=0.039 Sum_probs=84.9
Q ss_pred cCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCCh----
Q 015058 253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK---- 328 (414)
Q Consensus 253 l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~---- 328 (414)
++++.+ ++++++|++++||++.+++++..+.+-. + + +. .+++|++.|+|...
T Consensus 385 ~dpd~~-~ig~v~Rl~~yKr~dLil~~i~~l~~i~----~---------------~---~~-~pvq~V~~Gka~p~d~~g 440 (601)
T TIGR02094 385 LDPDVL-TIGFARRFATYKRADLIFRDLERLARIL----N---------------N---PE-RPVQIVFAGKAHPADGEG 440 (601)
T ss_pred cCCCCc-EEEEEEcchhhhhHHHHHHHHHHHHHHh----h---------------C---CC-CCeEEEEEEecCcccchH
Confidence 456775 8999999999999999999988886410 0 0 01 24999999999643
Q ss_pred ----HHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEe-eccCCCCCCCchhHHHHHHcCCeEEEeee------
Q 015058 329 ----ESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVC-LHTSSSGLDLPMKVCYCWYSRYSLKLLWT------ 396 (414)
Q Consensus 329 ----e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~-~~~s~~g~~lP~kl~Eama~G~Pvi~s~~------ 396 (414)
+.+.+++++-... +|.|+-+ -..+--..+++.||+++. |+...+ .=+..=+-||.-|-+.+++..
T Consensus 441 k~~i~~i~~la~~~~~~~kv~f~~~-Yd~~lA~~i~aG~Dv~L~~Psr~~E--acGtsqMka~~nGgL~~sv~DG~~~E~ 517 (601)
T TIGR02094 441 KEIIQRIVEFSKRPEFRGRIVFLEN-YDINLARYLVSGVDVWLNNPRRPLE--ASGTSGMKAAMNGVLNLSILDGWWGEG 517 (601)
T ss_pred HHHHHHHHHHHhcccCCCCEEEEcC-CCHHHHHHHhhhheeEEeCCCCCcC--CchHHHHHHHHcCCceeecccCccccc
Confidence 3344444432344 8999853 366677789999999997 543121 112245678888988887643
Q ss_pred -CCcccchhh
Q 015058 397 -CSVVGCLFV 405 (414)
Q Consensus 397 -~~~~~~~~~ 405 (414)
.+.+|-.|-
T Consensus 518 ~~~~nGf~f~ 527 (601)
T TIGR02094 518 YDGDNGWAIG 527 (601)
T ss_pred CCCCcEEEEC
Confidence 345776664
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.50 E-value=3.3e-05 Score=76.99 Aligned_cols=48 Identities=15% Similarity=0.188 Sum_probs=38.9
Q ss_pred cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 342 ~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
++.+.+ |.+ +|+..+|+.||++|+- .|. +.+.|++++|+|++..-..+
T Consensus 230 ~v~~~~-~~~-~~~~~~l~~ad~vI~~----~G~---~t~~Ea~~~g~P~l~ip~~~ 277 (321)
T TIGR00661 230 NVEIRR-ITT-DNFKELIKNAELVITH----GGF---SLISEALSLGKPLIVIPDLG 277 (321)
T ss_pred CEEEEE-CCh-HHHHHHHHhCCEEEEC----CCh---HHHHHHHHcCCCEEEEcCCC
Confidence 889886 766 7999999999999963 222 25899999999999977654
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=98.45 E-value=8.6e-06 Score=87.52 Aligned_cols=266 Identities=17% Similarity=0.102 Sum_probs=133.5
Q ss_pred CCcE-EEEeCCCCchHHHHHHHHHhh-cCCeEEEEEcCcc--hhhhh--------hc-cCCC----cHHHHHHHHHHHHH
Q 015058 101 SPDV-FLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFG--YTLLS--------LS-LGRR----SHFVSIYRWIEKYY 163 (414)
Q Consensus 101 ~~Dv-vh~~~pp~~~~~~~~~la~~~-~~~~~Iv~~H~~~--~~l~~--------~~-~~~~----~~~~~i~~~~Ek~~ 163 (414)
++.| .|+|-+ .+++...++++. ..+..|+|-|-.. -++-+ +. ++.+ .+-...-..+||..
T Consensus 142 ~~~ViaHfHEW---maG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraa 218 (633)
T PF05693_consen 142 KPKVIAHFHEW---MAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAA 218 (633)
T ss_dssp SEEEEEEEESG---GGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHH
T ss_pred CCcEEEEechH---hHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHH
Confidence 4554 488887 444433333332 3677899999752 11100 00 0000 00011224679999
Q ss_pred hccCCEEEEeCHHHHHHHHHhhCCcE-EEecCC-CCCCcCCCChH-HH-HHHHHHhhhhccCCCCccccccCCCCCCCCc
Q 015058 164 GKMANGCLCVTQAMQHELAQNWGIKA-TVLYDQ-PPEFFHPTSLE-EK-HELFCRLNKILHQPLGVQDCVSNGMEGQKAD 239 (414)
Q Consensus 164 ~k~ad~ii~vS~~~~~~l~~~~gi~i-~vI~n~-~~~~f~p~~~~-~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 239 (414)
.+.||...+||+-.+.+-+...+.+. .|+||| +.++|.....- .+ ...|+++.. ++
T Consensus 219 A~~AdvFTTVSeITa~Ea~~LL~r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~----------fv---------- 278 (633)
T PF05693_consen 219 AHYADVFTTVSEITAKEAEHLLKRKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHE----------FV---------- 278 (633)
T ss_dssp HHHSSEEEESSHHHHHHHHHHHSS--SEE----B-GGGTSSTTHHHHHHHHHHHHHHH----------HH----------
T ss_pred HHhcCeeeehhhhHHHHHHHHhCCCCCEEcCCCccccccccchHHHHHHHHHHHHHHH----------HH----------
Confidence 99999999999999988877666654 788999 66666444321 11 223334321 11
Q ss_pred cceeeeccccccccCCCCCeEEEEeccCC-CCCChHHHHHHHHHhHHHHhhhhccCC--------------Cchhhh---
Q 015058 240 ETIFTSLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDD--------------STNEEV--- 301 (414)
Q Consensus 240 ~~~~~~~~~~~~~l~~~~~~~i~~vgrl~-~~Kg~~~LleA~~~l~~~~~~~~~~~~--------------~~~~~~--- 301 (414)
+..| .|.+.+++++.++++++||.. ..||+|.+|||+.++...... ..++ +-|-|+
T Consensus 279 ~~~f----~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~--~~~~~tVVaFii~pa~~~~~~ve~l~~ 352 (633)
T PF05693_consen 279 RGHF----YGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQ--AGSDKTVVAFIIVPAKTNSFNVESLKG 352 (633)
T ss_dssp HHHS----TT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHH--TT-S-EEEEEEE---SEEEE-HHHHHH
T ss_pred HHHh----cccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhh--cCCCCeEEEEEEecCccCCcCHHHHhh
Confidence 0111 233345556667888999997 679999999999998753210 0111 111111
Q ss_pred ----------------------h----------------------hhh-hcCCccCCCCcEEEEEEcCCCChHHHHHHHH
Q 015058 302 ----------------------F----------------------LKE-ISDGKQYLYPRLLFIITGKGPDKESYEEKIR 336 (414)
Q Consensus 302 ----------------------~----------------------~~~-~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~ 336 (414)
| ||. |-.-+....|-+.-.-.- -...+.+-..++
T Consensus 353 ~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~-d~~~DpILn~ir 431 (633)
T PF05693_consen 353 QAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLH-DDSNDPILNMIR 431 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEET-TTTT-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCC-CCccCHHHHHHH
Confidence 1 010 000011122222111111 234567888899
Q ss_pred HcCCC-------cEEEecCCCC------hhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 337 RLRLK-------RVAFRTMWLS------AEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 337 ~l~l~-------~V~f~g~~v~------~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
++++. .|+|...+++ .-+|.+++..||++|+|+.- |..+-.-+||.+.|+|.|+|+.+|.
T Consensus 432 r~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYY---EPWGYTPlE~~a~gVPsITTnLsGF 504 (633)
T PF05693_consen 432 RLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYY---EPWGYTPLECTAFGVPSITTNLSGF 504 (633)
T ss_dssp HTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SS---BSS-HHHHHHHHTT--EEEETTBHH
T ss_pred hCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeecccc---ccccCChHHHhhcCCceeeccchhH
Confidence 98882 4777755544 45899999999999998542 3334456999999999999998874
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.39 E-value=7.7e-05 Score=75.79 Aligned_cols=122 Identities=16% Similarity=0.083 Sum_probs=66.8
Q ss_pred EEEEEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCC-CCC-C---------CC-
Q 015058 6 RACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTI-PRG-L---------PK- 73 (414)
Q Consensus 6 ~~~v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~-~~~-~---------~~- 73 (414)
|+.++..+..|.-..+...+..|.++ ||+|+++|.... ....+..|++++.++..... ... . ..
T Consensus 2 rIl~~~~p~~GHv~P~l~la~~L~~r-Gh~V~~~t~~~~---~~~v~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (401)
T cd03784 2 RVLITTIGSRGDVQPLVALAWALRAA-GHEVRVATPPEF---ADLVEAAGLEFVPVGGDPDELLASPERNAGLLLLGPGL 77 (401)
T ss_pred eEEEEeCCCcchHHHHHHHHHHHHHC-CCeEEEeeCHhH---HHHHHHcCCceeeCCCCHHHHHhhhhhcccccccchHH
Confidence 56667777777778888899999996 999999997642 22334566776665520000 000 0 00
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCc
Q 015058 74 VLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNF 137 (414)
Q Consensus 74 ~~~~~~~l~k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~ 137 (414)
...............+.-.+..+ +..+||+|+++.. ...+..++...++|++...+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~pDlvi~d~~-----~~~~~~~A~~~giP~v~~~~~~ 135 (401)
T cd03784 78 LLGALRLLRREAEAMLDDLVAAA-RDWGPDLVVADPL-----AFAGAVAAEALGIPAVRLLLGP 135 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-cccCCCEEEeCcH-----HHHHHHHHHHhCCCeEEeeccc
Confidence 00001111111111111122222 2479999887742 2334555667899998866653
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.31 E-value=0.00018 Score=74.61 Aligned_cols=211 Identities=17% Similarity=0.176 Sum_probs=128.0
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~ 179 (414)
.+||++++.-.-.+|..+ .-.+.+++|+++-.--... .++. . ++-.+.+.+.+.+..|.|+++|+..++
T Consensus 122 ~~P~l~Ii~EtElWPnli---~e~~~~~~p~~LvNaRLS~----rS~~---~-y~k~~~~~~~~~~~i~li~aQse~D~~ 190 (419)
T COG1519 122 WRPKLLIIMETELWPNLI---NELKRRGIPLVLVNARLSD----RSFA---R-YAKLKFLARLLFKNIDLILAQSEEDAQ 190 (419)
T ss_pred cCCCEEEEEeccccHHHH---HHHHHcCCCEEEEeeeech----hhhH---H-HHHHHHHHHHHHHhcceeeecCHHHHH
Confidence 799987776543344433 2245678998763211110 0111 1 122233345556889999999999999
Q ss_pred HHHHhhCCc-EEEecCCCCCCcC-C--CChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCC
Q 015058 180 ELAQNWGIK-ATVLYDQPPEFFH-P--TSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (414)
Q Consensus 180 ~l~~~~gi~-i~vI~n~~~~~f~-p--~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 255 (414)
.+.+. |.+ +.+.-|- .++. | ....+...++.+ ++.
T Consensus 191 Rf~~L-Ga~~v~v~GNl--Kfd~~~~~~~~~~~~~~r~~--------------------------------------l~~ 229 (419)
T COG1519 191 RFRSL-GAKPVVVTGNL--KFDIEPPPQLAAELAALRRQ--------------------------------------LGG 229 (419)
T ss_pred HHHhc-CCcceEEecce--eecCCCChhhHHHHHHHHHh--------------------------------------cCC
Confidence 99875 877 4544443 2221 1 222223334433 222
Q ss_pred CCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCCh-HHHHHH
Q 015058 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYEEK 334 (414)
Q Consensus 256 ~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~-e~l~~~ 334 (414)
.||..|.-+ . .+..-+.+++|.+.+++ .+||.+++++-.=|++ +..+++
T Consensus 230 ~r~v~iaaS-T--H~GEeei~l~~~~~l~~---------------------------~~~~~llIlVPRHpERf~~v~~l 279 (419)
T COG1519 230 HRPVWVAAS-T--HEGEEEIILDAHQALKK---------------------------QFPNLLLILVPRHPERFKAVENL 279 (419)
T ss_pred CCceEEEec-C--CCchHHHHHHHHHHHHh---------------------------hCCCceEEEecCChhhHHHHHHH
Confidence 265333333 3 23344678999999987 4789999999888876 689999
Q ss_pred HHHcCCCcEEEecC-CC----------ChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe
Q 015058 335 IRRLRLKRVAFRTM-WL----------SAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL 394 (414)
Q Consensus 335 i~~l~l~~V~f~g~-~v----------~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s 394 (414)
+++.|++...+..+ .. +--++-.+|+.||+..+- .|-...| +--++|+.++|+|||..
T Consensus 280 ~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVG-GSlv~~G-GHN~LEpa~~~~pvi~G 348 (419)
T COG1519 280 LKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVG-GSLVPIG-GHNPLEPAAFGTPVIFG 348 (419)
T ss_pred HHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEEC-CcccCCC-CCChhhHHHcCCCEEeC
Confidence 99999875554432 11 123688999999996532 1111122 23479999999999973
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.9e-05 Score=82.92 Aligned_cols=89 Identities=10% Similarity=0.036 Sum_probs=72.3
Q ss_pred HHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCC-hHHHHHHHHHcCCCcEEEecCCCCh
Q 015058 274 GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-KESYEEKIRRLRLKRVAFRTMWLSA 352 (414)
Q Consensus 274 ~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~-~e~l~~~i~~l~l~~V~f~g~~v~~ 352 (414)
+.+|++++.+.+ ..|+++|-| |.|.+ .++|.++ .+. ++|+...++ ..
T Consensus 291 s~~I~~i~~Lv~---------------------------~lPd~~f~I-ga~te~s~kL~~L-~~y--~nvvly~~~-~~ 338 (438)
T TIGR02919 291 SDQIEHLEEIVQ---------------------------ALPDYHFHI-AALTEMSSKLMSL-DKY--DNVKLYPNI-TT 338 (438)
T ss_pred HHHHHHHHHHHH---------------------------hCCCcEEEE-EecCcccHHHHHH-Hhc--CCcEEECCc-Ch
Confidence 788999999987 379999999 88877 6788887 665 655555423 45
Q ss_pred hhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 353 EDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 353 ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
.++.++|..||+++.. +.++++++.+.||++.|+||++.++.
T Consensus 339 ~~l~~ly~~~dlyLdi---n~~e~~~~al~eA~~~G~pI~afd~t 380 (438)
T TIGR02919 339 QKIQELYQTCDIYLDI---NHGNEILNAVRRAFEYNLLILGFEET 380 (438)
T ss_pred HHHHHHHHhccEEEEc---cccccHHHHHHHHHHcCCcEEEEecc
Confidence 6899999999999953 34678999999999999999997765
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=98.21 E-value=8.2e-05 Score=75.42 Aligned_cols=216 Identities=19% Similarity=0.278 Sum_probs=124.9
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
..+-+-++.|.-. -+.++++.+..+++..++ .||-++..+.+ ...++..++...+.+...++...|.+ ++...
T Consensus 76 ~~r~~kff~HGqF-n~~lwlaLl~g~~~~~k~--~WhIWGaDLYe---~~~~~k~rlfy~lRr~aq~rvg~V~a-t~GDl 148 (360)
T PF07429_consen 76 ADRADKFFLHGQF-NPWLWLALLFGKIKLKKC--YWHIWGADLYE---DSRSLKFRLFYFLRRLAQKRVGHVFA-TRGDL 148 (360)
T ss_pred hCccceEEEeccC-cHHHHHHHHcCCccccce--EEEEeCchhhc---cccccchhHHHHHHHHHHhhcCeEEE-EcchH
Confidence 3577766666432 145566666665554444 47777655443 12333455666777888888888876 56666
Q ss_pred HHHHHhhCCc-EEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCC
Q 015058 179 HELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNR 257 (414)
Q Consensus 179 ~~l~~~~gi~-i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 257 (414)
...++.++.. ...+ |-|+.-+ ..+. . . +.....+. ..
T Consensus 149 ~~~~q~~~~~~~~~l-------yfPt~m~--~~~~-~-~-----------------~~~~~~~~--------------~l 186 (360)
T PF07429_consen 149 AYFQQRYPRVPASLL-------YFPTRMD--PALT-L-S-----------------EKNKKNKG--------------KL 186 (360)
T ss_pred HHHHHHcCCCCceEE-------EcCCCCc--hhhh-c-c-----------------ccccCCCC--------------ce
Confidence 6788877533 3333 2333211 0110 0 0 00000000 11
Q ss_pred CeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEE-EcCCCC----hHHHH
Q 015058 258 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII-TGKGPD----KESYE 332 (414)
Q Consensus 258 ~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI-~G~G~~----~e~l~ 332 (414)
.++|+++| ++..++ +||++.+++. ...++++++ .|-|.. .++++
T Consensus 187 tILvGNSg--d~sNnH---ieaL~~L~~~--------------------------~~~~~kIivPLsYg~~n~~Yi~~V~ 235 (360)
T PF07429_consen 187 TILVGNSG--DPSNNH---IEALEALKQQ--------------------------FGDDVKIIVPLSYGANNQAYIQQVI 235 (360)
T ss_pred EEEEcCCC--CCCccH---HHHHHHHHHh--------------------------cCCCeEEEEECCCCCchHHHHHHHH
Confidence 13444444 345566 4555555432 234688776 666653 34444
Q ss_pred HHHHHc-CCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 333 EKIRRL-RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 333 ~~i~~l-~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
+..+++ +-+++..+..++|-+||-.+|+.||++++.|.-.-|. + -++=.+++|+||+.+...
T Consensus 236 ~~~~~lF~~~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgi--G-nI~lLl~~G~~v~L~~~n 298 (360)
T PF07429_consen 236 QAGKELFGAENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGI--G-NICLLLQLGKKVFLSRDN 298 (360)
T ss_pred HHHHHhcCccceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhH--h-HHHHHHHcCCeEEEecCC
Confidence 555554 3347888877999999999999999999876544444 3 488899999999987654
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.00023 Score=73.33 Aligned_cols=282 Identities=17% Similarity=0.179 Sum_probs=153.3
Q ss_pred EEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEE-EEeecCCCCCCCCCCchHHHHHHHHHHHH
Q 015058 9 VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHI-HTMTQWPTIPRGLPKVLKPVLLLLKPLIQ 87 (414)
Q Consensus 9 v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i-~~v~~~~~~~~~~~~~~~~~~~l~k~l~~ 87 (414)
.++.|+-+++---...+.+|.++ .-++.+.+-++.. .+..|++. ..+. ....-++-...+.+..+++...+
T Consensus 2 ~i~AGE~SGD~~ga~Li~~Lk~~-~p~~~~~GvGG~~-----M~~~G~~~l~d~~--~lsvmG~~Evl~~l~~~~~~~~~ 73 (373)
T PF02684_consen 2 FISAGEASGDLHGARLIRALKAR-DPDIEFYGVGGPR-----MQAAGVESLFDME--ELSVMGFVEVLKKLPKLKRLFRK 73 (373)
T ss_pred EEEeeCccHHHHHHHHHHHHHhh-CCCcEEEEEechH-----HHhCCCceecchH--HhhhccHHHHHHHHHHHHHHHHH
Confidence 35566666666666778888776 5678888776542 11234332 1222 00000110111111222222222
Q ss_pred HHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCe--EEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhc
Q 015058 88 FFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSA--FIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK 165 (414)
Q Consensus 88 ~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~--~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k 165 (414)
.. .. .+..+||+++.-+.|.. ++-+++.+++ ++++ +|+-+---.|. ++ .+. + +.+.+
T Consensus 74 ~~----~~-~~~~~pd~vIlID~pgF-Nlrlak~lk~-~~~~~~viyYI~PqvWA-----Wr-~~R---~-----~~i~~ 132 (373)
T PF02684_consen 74 LV----ER-IKEEKPDVVILIDYPGF-NLRLAKKLKK-RGIPIKVIYYISPQVWA-----WR-PGR---A-----KKIKK 132 (373)
T ss_pred HH----HH-HHHcCCCEEEEeCCCCc-cHHHHHHHHH-hCCCceEEEEECCceee-----eC-ccH---H-----HHHHH
Confidence 11 11 13589998877776544 3445555554 3444 65433221110 21 111 1 12335
Q ss_pred cCCEEEEeCHHHHHHHHHhhCCcEEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeee
Q 015058 166 MANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTS 245 (414)
Q Consensus 166 ~ad~ii~vS~~~~~~l~~~~gi~i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (414)
.+|.++|+=+--.++..+. |++++.+=|.-.+...+... +.+.++++
T Consensus 133 ~~D~ll~ifPFE~~~y~~~-g~~~~~VGHPl~d~~~~~~~--~~~~~~~~------------------------------ 179 (373)
T PF02684_consen 133 YVDHLLVIFPFEPEFYKKH-GVPVTYVGHPLLDEVKPEPD--RAEAREKL------------------------------ 179 (373)
T ss_pred HHhheeECCcccHHHHhcc-CCCeEEECCcchhhhccCCC--HHHHHHhc------------------------------
Confidence 6799999999888888764 88877775552233333321 12223221
Q ss_pred ccccccccCCCCCeEEEEecc-CCCC-CChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEc
Q 015058 246 LAGIDVFLKPNRPALVVSSTS-WTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG 323 (414)
Q Consensus 246 ~~~~~~~l~~~~~~~i~~vgr-l~~~-Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G 323 (414)
++++++.+.+.-|+ -++- +.+..+++|++.+++ .+|+++|++..
T Consensus 180 -------l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~---------------------------~~p~l~fvvp~ 225 (373)
T PF02684_consen 180 -------LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKK---------------------------QRPDLQFVVPV 225 (373)
T ss_pred -------CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHH---------------------------hCCCeEEEEec
Confidence 34455555555443 2232 344788999999887 47899999876
Q ss_pred CCCChHH-HHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 324 KGPDKES-YEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 324 ~G~~~e~-l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
--...++ +++..++.+.. +...- ..++-...|++||+.+.. || ++.+|++..|+|.|...--+
T Consensus 226 a~~~~~~~i~~~~~~~~~~-~~~~~---~~~~~~~~m~~ad~al~~----SG----TaTLE~Al~g~P~Vv~Yk~~ 289 (373)
T PF02684_consen 226 APEVHEELIEEILAEYPPD-VSIVI---IEGESYDAMAAADAALAA----SG----TATLEAALLGVPMVVAYKVS 289 (373)
T ss_pred CCHHHHHHHHHHHHhhCCC-CeEEE---cCCchHHHHHhCcchhhc----CC----HHHHHHHHhCCCEEEEEcCc
Confidence 5444444 55555555444 22221 244566689999998853 33 37899999999999765433
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.14 E-value=0.00016 Score=72.46 Aligned_cols=215 Identities=18% Similarity=0.188 Sum_probs=124.8
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~ 179 (414)
.+.+=+++|.-. -+.++++.+..+.+..+ +.||-++..+.. ...++..+++..+.|...++...+++ ++....
T Consensus 38 ~r~~rff~HGqF-n~~lwlall~g~~~~~q--~yWhiWGaDLYe---~~~~lk~rlfy~lRR~aq~rvg~v~a-trGD~~ 110 (322)
T PRK02797 38 NRAQRFFLHGQF-NPTLWLALLSGKIKPKQ--FYWHIWGADLYE---ESKGLKFRLFYPLRRLAQKRVGHVFA-TRGDLS 110 (322)
T ss_pred CccceEEEecCC-CHHHHHHHHhCCcCccc--eEEEEEChhhhh---cccchhHHHHHHHHHHHHhhcCeEEE-ecchHH
Confidence 566656666432 14555565555444333 348877665542 13455567777888888899999999 554444
Q ss_pred H-HHHhhCCcEEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCC
Q 015058 180 E-LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRP 258 (414)
Q Consensus 180 ~-l~~~~gi~i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 258 (414)
+ -+++++.+...+| -|+.... .+. . ++........+|
T Consensus 111 ~~a~~~~~v~~~lly-------fpt~m~~--~l~-~------------------~~~~~~~~~~~t-------------- 148 (322)
T PRK02797 111 YFAQRHPKVPGSLLY-------FPTRMDP--SLN-T------------------MANDRQRAGKMT-------------- 148 (322)
T ss_pred HHHHhcCCCCccEEe-------cCCcchh--hhc-c------------------ccccccCCCceE--------------
Confidence 5 4455577644332 2322110 000 0 000000001111
Q ss_pred eEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEE-EcC--CC--ChHHHHH
Q 015058 259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII-TGK--GP--DKESYEE 333 (414)
Q Consensus 259 ~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI-~G~--G~--~~e~l~~ 333 (414)
++|+++| +|-.++-..|++++... ..++++++ .|- |. +.+++++
T Consensus 149 IlvGNSg--d~SN~Hie~L~~l~~~~-----------------------------~~~v~ii~PlsYp~gn~~Yi~~V~~ 197 (322)
T PRK02797 149 ILVGNSG--DRSNRHIEALRALHQQF-----------------------------GDNVKIIVPMGYPANNQAYIEEVRQ 197 (322)
T ss_pred EEEeCCC--CCcccHHHHHHHHHHHh-----------------------------CCCeEEEEECCcCCCCHHHHHHHHH
Confidence 2333433 34556645555544432 35788877 555 32 3345555
Q ss_pred HHHHcCC-CcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 334 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 334 ~i~~l~l-~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
..+++-- ++++.+..+++-+||..+|+.||++++.|.-.-|.| -+|=.++.|+||+.+...
T Consensus 198 ~~~~lF~~~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiG---nl~lLi~~G~~v~l~r~n 259 (322)
T PRK02797 198 AGLALFGAENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIG---TLCLLIQLGKPVVLSRDN 259 (322)
T ss_pred HHHHhcCcccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHh---HHHHHHHCCCcEEEecCC
Confidence 5566654 489998889999999999999999998765444443 478889999999986543
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00083 Score=68.41 Aligned_cols=65 Identities=18% Similarity=0.264 Sum_probs=44.2
Q ss_pred EEEEcCCCChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 319 FIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 319 liI~G~G~~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
++.+|.|...+.+++ + -.+|.+.+ |++.. .+|..||++|+. .|. ..+.||+++|+|+|+.-..+
T Consensus 258 i~~~g~~~~~~~~~~----~-~~~v~~~~-~~p~~---~ll~~~~~~I~h----gG~---~t~~Eal~~G~P~v~~p~~~ 321 (392)
T TIGR01426 258 VLSVGRGVDPADLGE----L-PPNVEVRQ-WVPQL---EILKKADAFITH----GGM---NSTMEALFNGVPMVAVPQGA 321 (392)
T ss_pred EEEECCCCChhHhcc----C-CCCeEEeC-CCCHH---HHHhhCCEEEEC----CCc---hHHHHHHHhCCCEEecCCcc
Confidence 445777765443322 1 13888886 88864 578999999952 222 26899999999999965544
Q ss_pred c
Q 015058 399 V 399 (414)
Q Consensus 399 ~ 399 (414)
+
T Consensus 322 d 322 (392)
T TIGR01426 322 D 322 (392)
T ss_pred c
Confidence 3
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.09 E-value=3.2e-05 Score=78.68 Aligned_cols=209 Identities=19% Similarity=0.121 Sum_probs=109.0
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
..+||+|+++.-. ...+++.+++...++| |+++|.=..+. ..+.+ ..--..| +...+.||.-+|.++..+
T Consensus 65 ~~~Pd~Vlv~GD~--~~~la~alaA~~~~ip-v~HieaGlRs~-d~~~g---~~de~~R---~~i~~la~lhf~~t~~~~ 134 (346)
T PF02350_consen 65 REKPDAVLVLGDR--NEALAAALAAFYLNIP-VAHIEAGLRSG-DRTEG---MPDEINR---HAIDKLAHLHFAPTEEAR 134 (346)
T ss_dssp HHT-SEEEEETTS--HHHHHHHHHHHHTT-E-EEEES-----S--TTSS---TTHHHHH---HHHHHH-SEEEESSHHHH
T ss_pred hcCCCEEEEEcCC--chHHHHHHHHHHhCCC-EEEecCCCCcc-ccCCC---Cchhhhh---hhhhhhhhhhccCCHHHH
Confidence 3799999999762 4556777888889999 44555421100 00011 1122222 355689999999999999
Q ss_pred HHHHHhhCCc---EEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeecccccccc--
Q 015058 179 HELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL-- 253 (414)
Q Consensus 179 ~~l~~~~gi~---i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-- 253 (414)
+.|.+. |++ +.++=|.-.+.+ ...+.+.. ..+. ..++
T Consensus 135 ~~L~~~-G~~~~rI~~vG~~~~D~l--------~~~~~~~~------------------------~~~~-----~~~i~~ 176 (346)
T PF02350_consen 135 ERLLQE-GEPPERIFVVGNPGIDAL--------LQNKEEIE------------------------EKYK-----NSGILQ 176 (346)
T ss_dssp HHHHHT-T--GGGEEE---HHHHHH--------HHHHHTTC------------------------C-HH-----HHHHHH
T ss_pred HHHHhc-CCCCCeEEEEChHHHHHH--------HHhHHHHh------------------------hhhh-----hHHHHh
Confidence 999886 885 555522211111 00000000 0000 0011
Q ss_pred CCCCCeEEEEeccCCC---CCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcC--CCCh
Q 015058 254 KPNRPALVVSSTSWTP---DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK--GPDK 328 (414)
Q Consensus 254 ~~~~~~~i~~vgrl~~---~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~--G~~~ 328 (414)
...+++++++.=+.+. .+....+.++++.+.+ .+++.+++..- =+..
T Consensus 177 ~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~----------------------------~~~~~vi~~~hn~p~~~ 228 (346)
T PF02350_consen 177 DAPKPYILVTLHPVTNEDNPERLEQILEALKALAE----------------------------RQNVPVIFPLHNNPRGS 228 (346)
T ss_dssp CTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHH----------------------------HTTEEEEEE--S-HHHH
T ss_pred ccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHh----------------------------cCCCcEEEEecCCchHH
Confidence 1233455555533322 2334566666666664 24688887653 1234
Q ss_pred HHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHH-HHHHcCCeEEEee
Q 015058 329 ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVC-YCWYSRYSLKLLW 395 (414)
Q Consensus 329 e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~-Eama~G~Pvi~s~ 395 (414)
..+.+.++++ ++|++.. .++..++..+++.|++.|. .|+| +. ||.+.|+|+|...
T Consensus 229 ~~i~~~l~~~--~~v~~~~-~l~~~~~l~ll~~a~~vvg---dSsG------I~eEa~~lg~P~v~iR 284 (346)
T PF02350_consen 229 DIIIEKLKKY--DNVRLIE-PLGYEEYLSLLKNADLVVG---DSSG------IQEEAPSLGKPVVNIR 284 (346)
T ss_dssp HHHHHHHTT---TTEEEE-----HHHHHHHHHHESEEEE---SSHH------HHHHGGGGT--EEECS
T ss_pred HHHHHHhccc--CCEEEEC-CCCHHHHHHHHhcceEEEE---cCcc------HHHHHHHhCCeEEEec
Confidence 4555555555 4899996 7899999999999999983 2323 56 9999999999873
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00049 Score=70.65 Aligned_cols=280 Identities=15% Similarity=0.146 Sum_probs=148.7
Q ss_pred EEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEE-EeecCCCCCCCCCCchHHHHHHHHHHHHH
Q 015058 10 VVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIH-TMTQWPTIPRGLPKVLKPVLLLLKPLIQF 88 (414)
Q Consensus 10 ~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~-~v~~~~~~~~~~~~~~~~~~~l~k~l~~~ 88 (414)
++.|+-+++---....++|-.+-+ +|.+++-++.. . +..|++.. .+. ....-++-.....+..+++...+.
T Consensus 6 i~AGE~SGDllGa~LikaLk~~~~-~~efvGvgG~~-m----~aeG~~sl~~~~--elsvmGf~EVL~~lp~llk~~~~~ 77 (381)
T COG0763 6 LSAGEASGDLLGAGLIKALKARYP-DVEFVGVGGEK-M----EAEGLESLFDME--ELSVMGFVEVLGRLPRLLKIRREL 77 (381)
T ss_pred EEecccchhhHHHHHHHHHHhhCC-CeEEEEeccHH-H----HhccCccccCHH--HHHHhhHHHHHHHHHHHHHHHHHH
Confidence 344555666556667778877634 89999877543 1 11222111 011 000000111112222222222222
Q ss_pred HHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhc-CCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccC
Q 015058 89 FMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLR-RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMA 167 (414)
Q Consensus 89 ~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~-~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~a 167 (414)
... + ...+||+++.-+.|... .-++..+++.. .+|+|.-+--..|. +... |. . .+.+.+
T Consensus 78 ~~~----i-~~~kpD~~i~IDsPdFn-l~vak~lrk~~p~i~iihYV~PsVWA-----Wr~~----Ra-~----~i~~~~ 137 (381)
T COG0763 78 VRY----I-LANKPDVLILIDSPDFN-LRVAKKLRKAGPKIKIIHYVSPSVWA-----WRPK----RA-V----KIAKYV 137 (381)
T ss_pred HHH----H-HhcCCCEEEEeCCCCCc-hHHHHHHHHhCCCCCeEEEECcceee-----echh----hH-H----HHHHHh
Confidence 111 1 24899998888776553 33444444432 47877543332221 1111 11 1 222567
Q ss_pred CEEEEeCHHHHHHHHHhhCCcEEEecCC--CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeee
Q 015058 168 NGCLCVTQAMQHELAQNWGIKATVLYDQ--PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTS 245 (414)
Q Consensus 168 d~ii~vS~~~~~~l~~~~gi~i~vI~n~--~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (414)
|.++|+=+-..++..+ +|.+.+.|-+. |...+.+ .+.+.+++++
T Consensus 138 D~lLailPFE~~~y~k-~g~~~~yVGHpl~d~i~~~~----~r~~ar~~l~----------------------------- 183 (381)
T COG0763 138 DHLLAILPFEPAFYDK-FGLPCTYVGHPLADEIPLLP----DREAAREKLG----------------------------- 183 (381)
T ss_pred hHeeeecCCCHHHHHh-cCCCeEEeCChhhhhccccc----cHHHHHHHhC-----------------------------
Confidence 9999999988888765 58885555333 2111222 3455776654
Q ss_pred ccccccccCCCCCeEEEEeccCC-C-CCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEc
Q 015058 246 LAGIDVFLKPNRPALVVSSTSWT-P-DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG 323 (414)
Q Consensus 246 ~~~~~~~l~~~~~~~i~~vgrl~-~-~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G 323 (414)
++.+++.+.+.-|+=. + +.-...+.+|++.+++ .+|+++|++-=
T Consensus 184 -------~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~---------------------------~~~~~~~vlp~ 229 (381)
T COG0763 184 -------IDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKA---------------------------RYPDLKFVLPL 229 (381)
T ss_pred -------CCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHh---------------------------hCCCceEEEec
Confidence 3344445555555421 1 2234566777777775 47899999865
Q ss_pred CCCChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 324 KGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 324 ~G~~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
--+..+.+++...+...-..... +...+-.+.+.+||+.+.. || ++.+|++.+|+|.|++.-
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~a~~~aD~al~a----SG----T~tLE~aL~g~P~Vv~Yk 291 (381)
T COG0763 230 VNAKYRRIIEEALKWEVAGLSLI---LIDGEKRKAFAAADAALAA----SG----TATLEAALAGTPMVVAYK 291 (381)
T ss_pred CcHHHHHHHHHHhhccccCceEE---ecCchHHHHHHHhhHHHHh----cc----HHHHHHHHhCCCEEEEEe
Confidence 44443444433332221012222 2567778899999998743 23 378999999999998643
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.0013 Score=71.43 Aligned_cols=203 Identities=11% Similarity=0.026 Sum_probs=116.9
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCC--eEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRS--AFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQA 176 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~--~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~ 176 (414)
..+||+++.-+.|.. ++-+++.+++ .|+ |+|+-+---.|. ++ .+. + +.+.+.+|.++|+=+-
T Consensus 308 ~~kPD~vIlID~PgF-NlrLAK~lkk-~Gi~ipviyYVsPqVWA-----WR-~~R---i-----kki~k~vD~ll~IfPF 371 (608)
T PRK01021 308 KTNPRTVICIDFPDF-HFLLIKKLRK-RGYKGKIVHYVCPSIWA-----WR-PKR---K-----TILEKYLDLLLLILPF 371 (608)
T ss_pred hcCCCEEEEeCCCCC-CHHHHHHHHh-cCCCCCEEEEECcccee-----eC-cch---H-----HHHHHHhhhheecCcc
Confidence 479999887776544 3345666555 464 876533222221 21 211 1 1223567999999999
Q ss_pred HHHHHHHhhCCcEEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCC
Q 015058 177 MQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN 256 (414)
Q Consensus 177 ~~~~l~~~~gi~i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 256 (414)
..+..++ +|++++.+=+.-.+...+.. .+.+.+++++ ++++
T Consensus 372 E~~~y~~-~gv~v~yVGHPL~d~i~~~~--~~~~~r~~lg------------------------------------l~~~ 412 (608)
T PRK01021 372 EQNLFKD-SPLRTVYLGHPLVETISSFS--PNLSWKEQLH------------------------------------LPSD 412 (608)
T ss_pred CHHHHHh-cCCCeEEECCcHHhhcccCC--CHHHHHHHcC------------------------------------CCCC
Confidence 8988876 59997777555222222111 2234454533 3445
Q ss_pred CCeEEEEecc-CCC-CCChHHHHHHHH--HhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcC-CCChHHH
Q 015058 257 RPALVVSSTS-WTP-DEDFGILLEAAL--MYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK-GPDKESY 331 (414)
Q Consensus 257 ~~~~i~~vgr-l~~-~Kg~~~LleA~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~-G~~~e~l 331 (414)
++.+.+.-|+ -++ ....+.+++|++ .+. ++.+|++... +..++.+
T Consensus 413 ~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~------------------------------~~l~fvvp~a~~~~~~~i 462 (608)
T PRK01021 413 KPIVAAFPGSRRGDILRNLTIQVQAFLASSLA------------------------------STHQLLVSSANPKYDHLI 462 (608)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc------------------------------cCeEEEEecCchhhHHHH
Confidence 5544444443 222 234567777776 332 2578877532 2335677
Q ss_pred HHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 332 EEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 332 ~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
++.++..++-.+.+.. .+ +-.+++++||+.+.. || ++.+|++..|+|.|...--+
T Consensus 463 ~~~~~~~~~~~~~ii~---~~-~~~~~m~aaD~aLaa----SG----TaTLEaAL~g~PmVV~YK~s 517 (608)
T PRK01021 463 LEVLQQEGCLHSHIVP---SQ-FRYELMRECDCALAK----CG----TIVLETALNQTPTIVTCQLR 517 (608)
T ss_pred HHHHhhcCCCCeEEec---Cc-chHHHHHhcCeeeec----CC----HHHHHHHHhCCCEEEEEecC
Confidence 7777554422344442 22 236899999999853 23 47899999999999865443
|
|
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.001 Score=74.43 Aligned_cols=115 Identities=17% Similarity=0.179 Sum_probs=77.2
Q ss_pred cCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCCh----
Q 015058 253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK---- 328 (414)
Q Consensus 253 l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~---- 328 (414)
++|+.+ +|++++|++++|+.+.+++.+..+.+ |+++ +..| ++|++.|+|...
T Consensus 474 ldpd~l-tigfarRfa~YKR~~Lil~dl~rl~~----il~~------------------~~~p-vQ~IfaGKAhP~d~~g 529 (778)
T cd04299 474 LDPNVL-TIGFARRFATYKRATLLLRDPERLKR----LLND------------------PERP-VQFIFAGKAHPADEPG 529 (778)
T ss_pred cCCCcc-EEeeeecchhhhhHHHHHHHHHHHHH----HhhC------------------CCCC-eEEEEEEecCccchHH
Confidence 556664 89999999999999999999888764 1111 1234 999999998521
Q ss_pred HHHHHHHHHc----CCC-cEEEecCCCChhhHHHHHhhccEEEeeccC---CCCCCCchhHHHHHHcCCeEEEeee
Q 015058 329 ESYEEKIRRL----RLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTS---SSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 329 e~l~~~i~~l----~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s---~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
+++.+.+.++ ... +|.|+-++ ..+--..+++.||+.+.++.. .+|++ =+-||.-|.+-+++-.
T Consensus 530 K~iIk~i~~~a~~p~~~~kVvfle~Y-d~~lA~~LvaG~DvwLn~prrp~EAsGTS----gMKA~~NG~LnlSvlD 600 (778)
T cd04299 530 KELIQEIVEFSRRPEFRGRIVFLEDY-DMALARHLVQGVDVWLNTPRRPLEASGTS----GMKAALNGGLNLSVLD 600 (778)
T ss_pred HHHHHHHHHHHhCcCCCCcEEEEcCC-CHHHHHHHHhhhhhcccCCCCCCCCCccc----hHHHHHcCCeeeeccc
Confidence 2333333333 344 89998633 666677889999999965431 23432 3557778887776433
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.0012 Score=70.07 Aligned_cols=115 Identities=7% Similarity=-0.011 Sum_probs=79.2
Q ss_pred eEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcC-----CCC----hH
Q 015058 259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK-----GPD----KE 329 (414)
Q Consensus 259 ~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~-----G~~----~e 329 (414)
.+|+.+.|+..-||+..=++|++.+.++.+. ...++.|+-+.- .+. +.
T Consensus 256 ~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe-----------------------~~gkvvlvQia~psR~~v~~Y~~l~~ 312 (474)
T PRK10117 256 QNIFSVERLDYSKGLPERFLAYEALLEKYPQ-----------------------HHGKIRYTQIAPTSRGDVQAYQDIRH 312 (474)
T ss_pred eEEEEecccccccCHHHHHHHHHHHHHhChh-----------------------hcCCEEEEEEcCCCCCccHHHHHHHH
Confidence 3899999999999999999999998764210 112466765542 222 23
Q ss_pred HHHHHHHHcC-------CCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCe-----EEEeeeC
Q 015058 330 SYEEKIRRLR-------LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYS-----LKLLWTC 397 (414)
Q Consensus 330 ~l~~~i~~l~-------l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~P-----vi~s~~~ 397 (414)
++++.+.+-+ ..-|.++...++++++..+|+.||++++. +.-.|+-.+.-||.||.-| +|.|...
T Consensus 313 ~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVT---plRDGMNLVAkEyva~q~~~~~GvLILSefA 389 (474)
T PRK10117 313 QLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVT---PLRDGMNLVAKEYVAAQDPANPGVLVLSQFA 389 (474)
T ss_pred HHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEec---ccccccccccchheeeecCCCCccEEEeccc
Confidence 3444444422 22477776678999999999999999853 2234566688999999763 7777776
Q ss_pred Cc
Q 015058 398 SV 399 (414)
Q Consensus 398 ~~ 399 (414)
|.
T Consensus 390 Ga 391 (474)
T PRK10117 390 GA 391 (474)
T ss_pred ch
Confidence 64
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.0023 Score=72.54 Aligned_cols=101 Identities=11% Similarity=0.073 Sum_probs=73.1
Q ss_pred eEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCc----EEEEEEc-----CCCChH
Q 015058 259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR----LLFIITG-----KGPDKE 329 (414)
Q Consensus 259 ~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----i~liI~G-----~G~~~e 329 (414)
.+|+.+.|+..-||+..=++|++.+.++ +|+ +.|+-+. ++++.+
T Consensus 340 ~~ilgVDrlD~~KGi~~kl~A~e~~L~~---------------------------~P~~~gkvvlvQia~psr~~~~~y~ 392 (854)
T PLN02205 340 IMLLGVDDMDIFKGISLKLLAMEQLLMQ---------------------------HPEWQGKVVLVQIANPARGKGKDVK 392 (854)
T ss_pred EEEEEccCcccccCHHHHHHHHHHHHHh---------------------------CccccCCEEEEEEecCCCcccHHHH
Confidence 4999999999999999999999998763 443 4566554 344444
Q ss_pred HHH----HHHHHc-------CCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCC
Q 015058 330 SYE----EKIRRL-------RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRY 389 (414)
Q Consensus 330 ~l~----~~i~~l-------~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~ 389 (414)
+++ +.+.+- +..-|.++...++.+++..+|+.||++++. +.-.|+-.+..||.+|..
T Consensus 393 ~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT---~lRDGMNLva~Eyia~~~ 460 (854)
T PLN02205 393 EVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVT---AVRDGMNLIPYEYIISRQ 460 (854)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEec---cccccccccchheeEEcc
Confidence 444 444432 223578886578999999999999999853 223456667899999875
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0054 Score=61.23 Aligned_cols=103 Identities=17% Similarity=0.109 Sum_probs=67.2
Q ss_pred CCCCCeEEEEecc-CCCCCCh--HHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHH
Q 015058 254 KPNRPALVVSSTS-WTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 330 (414)
Q Consensus 254 ~~~~~~~i~~vgr-l~~~Kg~--~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~ 330 (414)
.++++++++..|. +.+.|.- +...+.++.+.+ .+.+++++|...+++.
T Consensus 171 ~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~-----------------------------~~~~ivl~G~~~e~~~ 221 (334)
T TIGR02195 171 DTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID-----------------------------QGYQVVLFGSAKDHPA 221 (334)
T ss_pred CCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH-----------------------------CCCEEEEEEChhhHHH
Confidence 3445667777665 4455544 477777766653 1467888987666665
Q ss_pred HHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe
Q 015058 331 YEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL 394 (414)
Q Consensus 331 l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s 394 (414)
.++..+..+-..+.+.| ..+-.++..+++.||++|+..+ | |+=+ |-|.|+|+|+.
T Consensus 222 ~~~i~~~~~~~~~~l~g-~~sL~el~ali~~a~l~I~~DS---G---p~Hl--AaA~~~P~i~l 276 (334)
T TIGR02195 222 GNEIEALLPGELRNLAG-ETSLDEAVDLIALAKAVVTNDS---G---LMHV--AAALNRPLVAL 276 (334)
T ss_pred HHHHHHhCCcccccCCC-CCCHHHHHHHHHhCCEEEeeCC---H---HHHH--HHHcCCCEEEE
Confidence 55554443222344665 7789999999999999996432 1 2222 67899999984
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0032 Score=67.01 Aligned_cols=116 Identities=16% Similarity=0.106 Sum_probs=69.9
Q ss_pred eEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcC-----CCC----hH
Q 015058 259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK-----GPD----KE 329 (414)
Q Consensus 259 ~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~-----G~~----~e 329 (414)
.+|+.+.|+..-||+..=++|++.+.++.+. ...++.|+-++- .++ ++
T Consensus 277 ~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~-----------------------~~~kv~liQi~~psr~~~~~y~~~~~ 333 (474)
T PF00982_consen 277 KIIVGVDRLDYTKGIPEKLRAFERFLERYPE-----------------------YRGKVVLIQIAVPSREDVPEYQELRR 333 (474)
T ss_dssp EEEEEE--B-GGG-HHHHHHHHHHHHHH-GG-----------------------GTTTEEEEEE--B-STTSHHHHHHHH
T ss_pred EEEEEeccchhhcCHHHHHHHHHHHHHhCcC-----------------------ccCcEEEEEEeeccCccchhHHHHHH
Confidence 4999999999999999999999988765321 123477776653 121 23
Q ss_pred HHHHHHHHc----C---CCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCe----EEEeeeCC
Q 015058 330 SYEEKIRRL----R---LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYS----LKLLWTCS 398 (414)
Q Consensus 330 ~l~~~i~~l----~---l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~P----vi~s~~~~ 398 (414)
++++++.+. | ..-|.++...++.+++..+|+.||++++. +.-.|+-....||.+|..+ +|.|...|
T Consensus 334 ~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvT---slrDGmNLva~Eyva~q~~~~GvLiLSefaG 410 (474)
T PF00982_consen 334 EVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVT---SLRDGMNLVAKEYVACQDDNPGVLILSEFAG 410 (474)
T ss_dssp HHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE-----SSBS--HHHHHHHHHS-TS--EEEEETTBG
T ss_pred HHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEec---chhhccCCcceEEEEEecCCCCceEeeccCC
Confidence 444444432 2 12477777678999999999999999863 2345677899999999876 67777766
Q ss_pred cc
Q 015058 399 VV 400 (414)
Q Consensus 399 ~~ 400 (414)
.-
T Consensus 411 aa 412 (474)
T PF00982_consen 411 AA 412 (474)
T ss_dssp GG
T ss_pred HH
Confidence 54
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=97.64 E-value=9.4e-05 Score=71.63 Aligned_cols=81 Identities=17% Similarity=0.146 Sum_probs=47.5
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhhc-------CCeEEEEEcCcchhhh----h---hccCCCcH-------HHHHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSLR-------RSAFIVDWHNFGYTLL----S---LSLGRRSH-------FVSIYRW 158 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~~-------~~~~Iv~~H~~~~~l~----~---~~~~~~~~-------~~~i~~~ 158 (414)
.+|||||+|++ ++++++.+++... ++|+++|+||..+.-. . +++....+ ......
T Consensus 132 ~~pDIIH~hDW---~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in- 207 (245)
T PF08323_consen 132 WKPDIIHCHDW---HTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQIN- 207 (245)
T ss_dssp -S-SEEEEECG---GGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEE-
T ss_pred CCCCEEEecCc---hHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccC-
Confidence 58999999998 6666666666543 5999999999743200 0 00000000 000001
Q ss_pred HHHHHhccCCEEEEeCHHHHHHHHHh
Q 015058 159 IEKYYGKMANGCLCVTQAMQHELAQN 184 (414)
Q Consensus 159 ~Ek~~~k~ad~ii~vS~~~~~~l~~~ 184 (414)
+.|.-...||.|++||+.+++++.+.
T Consensus 208 ~lk~gi~~AD~v~TVS~~Ya~Ei~~~ 233 (245)
T PF08323_consen 208 FLKAGIVYADKVTTVSPTYAREIQTP 233 (245)
T ss_dssp HHHHHHHHSSEEEESSHHHHHHTTSH
T ss_pred HHHHHHHhcCEeeeCCHHHHHHHhCc
Confidence 22345578999999999999887654
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.033 Score=55.03 Aligned_cols=205 Identities=13% Similarity=0.058 Sum_probs=114.1
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~ 179 (414)
..||.++...- -+.+++..+++..+-+.+|.+.+.. + . +++.|.+|..-.+-.+
T Consensus 69 ~~Pdl~I~aGr---rta~l~~~lkk~~~~~~vVqI~~Pr--l------p---------------~~~fDlvivp~HD~~~ 122 (329)
T COG3660 69 QRPDLIITAGR---RTAPLAFYLKKKFGGIKVVQIQDPR--L------P---------------YNHFDLVIVPYHDWRE 122 (329)
T ss_pred CCCceEEeccc---chhHHHHHHHHhcCCceEEEeeCCC--C------C---------------cccceEEeccchhhhh
Confidence 56999998876 5667777777766556666554421 0 0 1355777776666665
Q ss_pred HHHHhhCCcEEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCe
Q 015058 180 ELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPA 259 (414)
Q Consensus 180 ~l~~~~gi~i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 259 (414)
...+. |.++.-| ||.+...-+.-...-.++++++. +..++.
T Consensus 123 ~~s~~-~~Nilpi-~Gs~h~Vt~~~lAa~~e~~~~~~-------------------------------------p~~rq~ 163 (329)
T COG3660 123 ELSDQ-GPNILPI-NGSPHNVTSQRLAALREAFKHLL-------------------------------------PLPRQR 163 (329)
T ss_pred hhhcc-CCceeec-cCCCCcccHHHhhhhHHHHHhhC-------------------------------------CCCCce
Confidence 54333 4444333 33211110100011123444431 334556
Q ss_pred EEEEeccCCCCCCh--HHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHHH
Q 015058 260 LVVSSTSWTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRR 337 (414)
Q Consensus 260 ~i~~vgrl~~~Kg~--~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~ 337 (414)
+-+.+|.=+++-.+ +...+-+..+.+-. ......|+|.=+-..-+..++.++.
T Consensus 164 vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l-------------------------~~~g~~~lisfSRRTp~~~~s~l~~ 218 (329)
T COG3660 164 VAVLVGGNNKAFVFQEDKAHQFASLLVKIL-------------------------ENQGGSFLISFSRRTPDTVKSILKN 218 (329)
T ss_pred EEEEecCCCCCCccCHHHHHHHHHHHHHHH-------------------------HhCCceEEEEeecCCcHHHHHHHHh
Confidence 77777766665555 33333333333211 1224677776554445567776665
Q ss_pred -cCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCcc
Q 015058 338 -LRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSVV 400 (414)
Q Consensus 338 -l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~~ 400 (414)
+.-. -+-+-+.--..+-|..+|++||.+|+.-.|. . -..||.++|+||-+..-.+++
T Consensus 219 ~l~s~~~i~w~~~d~g~NPY~~~La~Adyii~TaDSi---n---M~sEAasTgkPv~~~~~~~~~ 277 (329)
T COG3660 219 NLNSSPGIVWNNEDTGYNPYIDMLAAADYIISTADSI---N---MCSEAASTGKPVFILEPPNFN 277 (329)
T ss_pred ccccCceeEeCCCCCCCCchHHHHhhcceEEEecchh---h---hhHHHhccCCCeEEEecCCcc
Confidence 3333 3333221113458999999999999754332 2 258999999999998777765
|
|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.017 Score=58.97 Aligned_cols=135 Identities=16% Similarity=0.102 Sum_probs=74.4
Q ss_pred HHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCc
Q 015058 24 QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPD 103 (414)
Q Consensus 24 ~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k~~~~D 103 (414)
.+.+|-++ ||+|.|.|..... ..++.+.-|++...+. ... .. ....+...+.....++.. . +..+||
T Consensus 19 ~I~eL~~~-GheV~it~R~~~~-~~~LL~~yg~~y~~iG--~~g---~~----~~~Kl~~~~~R~~~l~~~-~-~~~~pD 85 (335)
T PF04007_consen 19 IIRELEKR-GHEVLITARDKDE-TEELLDLYGIDYIVIG--KHG---DS----LYGKLLESIERQYKLLKL-I-KKFKPD 85 (335)
T ss_pred HHHHHHhC-CCEEEEEEeccch-HHHHHHHcCCCeEEEc--CCC---CC----HHHHHHHHHHHHHHHHHH-H-HhhCCC
Confidence 45777775 9999999977532 3455666788887776 221 11 111122222222222221 1 337999
Q ss_pred EEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHHHHHH
Q 015058 104 VFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQ 183 (414)
Q Consensus 104 vvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~~l~~ 183 (414)
++++..+ + .+..+++.+|+|.|.-.++ +... . ..+.....||.+++.+---.+.+ .
T Consensus 86 v~is~~s---~---~a~~va~~lgiP~I~f~D~-e~a~----~------------~~~Lt~Pla~~i~~P~~~~~~~~-~ 141 (335)
T PF04007_consen 86 VAISFGS---P---EAARVAFGLGIPSIVFNDT-EHAI----A------------QNRLTLPLADVIITPEAIPKEFL-K 141 (335)
T ss_pred EEEecCc---H---HHHHHHHHhCCCeEEEecC-chhh----c------------cceeehhcCCeeECCcccCHHHH-H
Confidence 9988765 2 2334466789999874443 2210 0 11234468999887665444433 3
Q ss_pred hhCCcEEEe-cCC
Q 015058 184 NWGIKATVL-YDQ 195 (414)
Q Consensus 184 ~~gi~i~vI-~n~ 195 (414)
++|.+-.+. |||
T Consensus 142 ~~G~~~~i~~y~G 154 (335)
T PF04007_consen 142 RFGAKNQIRTYNG 154 (335)
T ss_pred hcCCcCCEEEECC
Confidence 467763344 677
|
They are found in archaea and some bacteria and have no known function. |
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.027 Score=56.95 Aligned_cols=100 Identities=11% Similarity=0.028 Sum_probs=60.7
Q ss_pred CeEEEEeccCCCCCC--hHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCC--hHHHHH
Q 015058 258 PALVVSSTSWTPDED--FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYEE 333 (414)
Q Consensus 258 ~~~i~~vgrl~~~Kg--~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~--~e~l~~ 333 (414)
++++++.|.=.+.|. .+...+.++.+.+ .+.+++++|...+ ++..++
T Consensus 184 ~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~-----------------------------~~~~vvl~ggp~e~e~~~~~~ 234 (352)
T PRK10422 184 NYVVIQPTARQIFKCWDNDKFSAVIDALQA-----------------------------RGYEVVLTSGPDKDDLACVNE 234 (352)
T ss_pred CeEEEecCCCccccCCCHHHHHHHHHHHHH-----------------------------CCCeEEEEcCCChHHHHHHHH
Confidence 456666665444554 4466666666643 1467788874322 222344
Q ss_pred HHHHcCCCc-EEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEee
Q 015058 334 KIRRLRLKR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLW 395 (414)
Q Consensus 334 ~i~~l~l~~-V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~ 395 (414)
..+...-.+ +.+.| ..+-.++..+++.||++|+..+ | |+=+ |-|.|+|+|+..
T Consensus 235 i~~~~~~~~~~~l~g-~~sL~el~ali~~a~l~v~nDS---G---p~Hl--AaA~g~P~v~lf 288 (352)
T PRK10422 235 IAQGCQTPPVTALAG-KTTFPELGALIDHAQLFIGVDS---A---PAHI--AAAVNTPLICLF 288 (352)
T ss_pred HHHhcCCCccccccC-CCCHHHHHHHHHhCCEEEecCC---H---HHHH--HHHcCCCEEEEE
Confidence 433323233 44555 7899999999999999996422 2 3322 678899999854
|
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.072 Score=54.59 Aligned_cols=66 Identities=18% Similarity=0.198 Sum_probs=45.3
Q ss_pred EEEEEcCCCChHHHHHHHHHcCC-CcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEE
Q 015058 318 LFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKL 393 (414)
Q Consensus 318 ~liI~G~G~~~e~l~~~i~~l~l-~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~ 393 (414)
-++|.|-=--++.-+++.+.-.- .+|+.+. .++|...+++.||+.|+. .|- +.+||.++.|+|.+.
T Consensus 253 ~~ivtGP~MP~~~r~~l~~~A~~~p~i~I~~---f~~~~~~ll~gA~~vVSm----~GY---NTvCeILs~~k~aLi 319 (400)
T COG4671 253 WLIVTGPFMPEAQRQKLLASAPKRPHISIFE---FRNDFESLLAGARLVVSM----GGY---NTVCEILSFGKPALI 319 (400)
T ss_pred eEEEeCCCCCHHHHHHHHHhcccCCCeEEEE---hhhhHHHHHHhhheeeec----ccc---hhhhHHHhCCCceEE
Confidence 46777643223333333333332 3899987 899999999999999953 222 368999999999875
|
|
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.03 Score=56.22 Aligned_cols=71 Identities=17% Similarity=0.141 Sum_probs=45.3
Q ss_pred cEEEEEEcCCCC--hHHHHHHHHHcCCCcE-EEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEE
Q 015058 316 RLLFIITGKGPD--KESYEEKIRRLRLKRV-AFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLK 392 (414)
Q Consensus 316 ~i~liI~G~G~~--~e~l~~~i~~l~l~~V-~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi 392 (414)
+..++++|.+.+ ++..++..+..+-.++ .+.| ..+-.++..+++.||++|+..+ | |+=+ |-|.|+|+|
T Consensus 213 ~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g-~~sL~el~ali~~a~l~Vs~DS---G---p~Hl--AaA~g~p~v 283 (344)
T TIGR02201 213 GYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAG-KLTLPQLAALIDHARLFIGVDS---V---PMHM--AAALGTPLV 283 (344)
T ss_pred CCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCC-CCCHHHHHHHHHhCCEEEecCC---H---HHHH--HHHcCCCEE
Confidence 467888884332 2233443333332344 4555 8889999999999999996422 2 3322 788999999
Q ss_pred Eee
Q 015058 393 LLW 395 (414)
Q Consensus 393 ~s~ 395 (414)
+.-
T Consensus 284 ~Lf 286 (344)
T TIGR02201 284 ALF 286 (344)
T ss_pred EEE
Confidence 853
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.028 Score=60.22 Aligned_cols=61 Identities=13% Similarity=0.098 Sum_probs=41.4
Q ss_pred EEEEEEcCCCChHHHHHHHHHcCCC-cEEEecCCCChhhHHHHH--hhccEEEeeccCCCCCCCchhHHHHHHcCCeEEE
Q 015058 317 LLFIITGKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLL--GSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKL 393 (414)
Q Consensus 317 i~liI~G~G~~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l--~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~ 393 (414)
.++++..++...+ .++. ||.+.+ |+|..+ +| ..+++||. |. |. ..+.||+++|+|+|+
T Consensus 329 ~~viw~~~~~~~~--------~~~p~Nv~i~~-w~Pq~~---lL~hp~v~~fIt-HG---G~---~s~~Eal~~GvP~v~ 389 (507)
T PHA03392 329 YNVLWKYDGEVEA--------INLPANVLTQK-WFPQRA---VLKHKNVKAFVT-QG---GV---QSTDEAIDALVPMVG 389 (507)
T ss_pred CeEEEEECCCcCc--------ccCCCceEEec-CCCHHH---HhcCCCCCEEEe-cC---Cc---ccHHHHHHcCCCEEE
Confidence 4677765543322 2344 999986 999866 45 56899994 32 22 258999999999998
Q ss_pred eee
Q 015058 394 LWT 396 (414)
Q Consensus 394 s~~ 396 (414)
.-.
T Consensus 390 iP~ 392 (507)
T PHA03392 390 LPM 392 (507)
T ss_pred CCC
Confidence 433
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0026 Score=64.42 Aligned_cols=190 Identities=13% Similarity=0.221 Sum_probs=86.9
Q ss_pred hhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHHHHHHhhCCcE-EEecCC-CC-CC-
Q 015058 124 SLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKA-TVLYDQ-PP-EF- 199 (414)
Q Consensus 124 ~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~~l~~~~gi~i-~vI~n~-~~-~~- 199 (414)
...+.++|-.||+.+..-.+..........+ .-+...+..|.++|.|+.+++.+.+.++.+. .++.-| |- +.
T Consensus 96 ~~~~~~~i~lwHG~~~K~~g~~~~~~~~~~~----~~~~~~~~~d~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l 171 (369)
T PF04464_consen 96 KRKNQKYIQLWHGIPLKKIGYDSPDNKNYRK----NYKRNYRNYDYFIVSSEFEKEIFKKAFGYPEDKILVTGYPRNDYL 171 (369)
T ss_dssp --TTSEEEE--SS--SB--GGG-S---TS-H----HHHHHHTT-SEEEESSHHHHHHHHHHTT--GGGEEES--GGGHHH
T ss_pred cCCCcEEEEecCCCcccccchhccccccchh----hhhhhccCCcEEEECCHHHHHHHHHHhccCcceEEEeCCCeEhHH
Confidence 3467889999999854221111100000001 1123457889999999999999999888872 444445 31 12
Q ss_pred cCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeEEEEeccCCCCCCh------
Q 015058 200 FHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDF------ 273 (414)
Q Consensus 200 f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~------ 273 (414)
+.... ..+..++++++ ++.++. +|+|+=.|+....-
T Consensus 172 ~~~~~-~~~~~i~~~~~------------------------------------~~~~~k-~ILyaPT~R~~~~~~~~~~~ 213 (369)
T PF04464_consen 172 FNKSK-ENRNRIKKKLG------------------------------------IDKDKK-VILYAPTWRDNSSNEYFKFF 213 (369)
T ss_dssp HHSTT--HHHHHHHHTT--------------------------------------SS-E-EEEEE----GGG--GGSS--
T ss_pred hccCH-HHHHHHHHHhc------------------------------------cCCCCc-EEEEeecccccccccccccc
Confidence 22222 22445555543 344553 88888777665443
Q ss_pred HHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHHH-cCCC-cEEEecCCCC
Q 015058 274 GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRR-LRLK-RVAFRTMWLS 351 (414)
Q Consensus 274 ~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~-l~l~-~V~f~g~~v~ 351 (414)
...++.-..... ..+++.+++-.= | ..+...+. .... +|.+.. +
T Consensus 214 ~~~~~~~~l~~~---------------------------~~~~~~li~k~H-p---~~~~~~~~~~~~~~~i~~~~---~ 259 (369)
T PF04464_consen 214 FSDLDFEKLNFL---------------------------LKNNYVLIIKPH-P---NMKKKFKDFKEDNSNIIFVS---D 259 (369)
T ss_dssp --TT-HHHHHHH---------------------------HTTTEEEEE--S-H---HHHTT----TT-TTTEEE-T---T
T ss_pred ccccCHHHHHHH---------------------------hCCCcEEEEEeC-c---hhhhchhhhhccCCcEEECC---C
Confidence 111111111110 134677777531 1 22222222 2333 899887 6
Q ss_pred hhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 352 AEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 352 ~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
.+++..+|..||+.|+ +..+.++|++.+++|||.-..+
T Consensus 260 ~~~~~~ll~~aDiLIT--------DySSi~fD~~~l~KPiify~~D 297 (369)
T PF04464_consen 260 NEDIYDLLAAADILIT--------DYSSIIFDFLLLNKPIIFYQPD 297 (369)
T ss_dssp -S-HHHHHHT-SEEEE--------SS-THHHHHGGGT--EEEE-TT
T ss_pred CCCHHHHHHhcCEEEE--------echhHHHHHHHhCCCEEEEecc
Confidence 7799999999999994 2234689999999999975433
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.029 Score=57.93 Aligned_cols=212 Identities=16% Similarity=0.111 Sum_probs=124.7
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
..+||+|.+|.-. .+.+++.+++...++|+-.---+.- ++... +--.+- .+...+.||.-+|.++..+
T Consensus 90 ~~kPD~VlVhGDT--~t~lA~alaa~~~~IpV~HvEAGlR------t~~~~-~PEE~N---R~l~~~~S~~hfapte~ar 157 (383)
T COG0381 90 EEKPDLVLVHGDT--NTTLAGALAAFYLKIPVGHVEAGLR------TGDLY-FPEEIN---RRLTSHLSDLHFAPTEIAR 157 (383)
T ss_pred hhCCCEEEEeCCc--chHHHHHHHHHHhCCceEEEecccc------cCCCC-CcHHHH---HHHHHHhhhhhcCChHHHH
Confidence 4899999999762 3445667778888999854222210 01111 111111 1355678899999999999
Q ss_pred HHHHHhhCCc---EEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccc-cccC
Q 015058 179 HELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGID-VFLK 254 (414)
Q Consensus 179 ~~l~~~~gi~---i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~ 254 (414)
+.|.+. |.+ +.++-|...+...-+. .....+.... .. +..+
T Consensus 158 ~nLl~E-G~~~~~IfvtGnt~iDal~~~~----~~~~~~~~~~------------------------------~~~~~~~ 202 (383)
T COG0381 158 KNLLRE-GVPEKRIFVTGNTVIDALLNTR----DRVLEDSKIL------------------------------AKGLDDK 202 (383)
T ss_pred HHHHHc-CCCccceEEeCChHHHHHHHHH----hhhccchhhH------------------------------Hhhhccc
Confidence 999886 876 6666555332221110 0000000000 00 1122
Q ss_pred CCCCeEEEEeccCCC-CCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHH
Q 015058 255 PNRPALVVSSTSWTP-DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (414)
Q Consensus 255 ~~~~~~i~~vgrl~~-~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~ 333 (414)
++..++++.=|-.. .+++..+.+|+..+.++ +|++.++.-= ..++.+++
T Consensus 203 -~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~---------------------------~~~~~viyp~--H~~~~v~e 252 (383)
T COG0381 203 -DKKYILVTAHRRENVGEPLEEICEALREIAEE---------------------------YPDVIVIYPV--HPRPRVRE 252 (383)
T ss_pred -cCcEEEEEcchhhcccccHHHHHHHHHHHHHh---------------------------CCCceEEEeC--CCChhhhH
Confidence 22345555443333 27888888888888763 5666655521 22356666
Q ss_pred HH-HHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 334 KI-RRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 334 ~i-~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
.. +.|+-. +|.++. .+...++..++..|-+.+ . .|.|. .=||-..|+||++...
T Consensus 253 ~~~~~L~~~~~v~li~-pl~~~~f~~L~~~a~~il--t-DSGgi-----qEEAp~lg~Pvl~lR~ 308 (383)
T COG0381 253 LVLKRLKNVERVKLID-PLGYLDFHNLMKNAFLIL--T-DSGGI-----QEEAPSLGKPVLVLRD 308 (383)
T ss_pred HHHHHhCCCCcEEEeC-CcchHHHHHHHHhceEEE--e-cCCch-----hhhHHhcCCcEEeecc
Confidence 66 556555 899995 788889999999996655 2 23332 4689999999998544
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0057 Score=64.86 Aligned_cols=118 Identities=8% Similarity=-0.086 Sum_probs=74.9
Q ss_pred eccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcC
Q 015058 245 SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK 324 (414)
Q Consensus 245 ~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~ 324 (414)
..-+..+||+.+. ++..+..++ .|=-+..+++...+.++ -|+.+|++...
T Consensus 273 ~~~R~~~gLp~d~-vvF~~fn~~--~KI~p~~l~~W~~IL~~---------------------------vP~S~L~L~~~ 322 (468)
T PF13844_consen 273 VTTRAQYGLPEDA-VVFGSFNNL--FKISPETLDLWARILKA---------------------------VPNSRLWLLRF 322 (468)
T ss_dssp EEETGGGT--SSS-EEEEE-S-G--GG--HHHHHHHHHHHHH---------------------------STTEEEEEEET
T ss_pred ccCHHHcCCCCCc-eEEEecCcc--ccCCHHHHHHHHHHHHh---------------------------CCCcEEEEeeC
Confidence 3458889998775 344444554 45667788888888775 58888877654
Q ss_pred CC-ChHHHHHHHHHcCCC--cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 325 GP-DKESYEEKIRRLRLK--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 325 G~-~~e~l~~~i~~l~l~--~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
+. .++.+++.++++|+. |+.|.+ ..+.++.-..++.+|+++=+ ... +=....+||+++|+|||+..-.
T Consensus 323 ~~~~~~~l~~~~~~~Gv~~~Ri~f~~-~~~~~ehl~~~~~~DI~LDT--~p~--nG~TTt~dALwmGVPvVTl~G~ 393 (468)
T PF13844_consen 323 PASGEARLRRRFAAHGVDPDRIIFSP-VAPREEHLRRYQLADICLDT--FPY--NGGTTTLDALWMGVPVVTLPGE 393 (468)
T ss_dssp STTHHHHHHHHHHHTTS-GGGEEEEE----HHHHHHHGGG-SEEE----SSS----SHHHHHHHHHT--EEB---S
T ss_pred CHHHHHHHHHHHHHcCCChhhEEEcC-CCCHHHHHHHhhhCCEEeeC--CCC--CCcHHHHHHHHcCCCEEeccCC
Confidence 43 357889999999997 999997 88999999999999999821 111 1245789999999999986533
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.14 Score=54.78 Aligned_cols=116 Identities=14% Similarity=0.042 Sum_probs=81.3
Q ss_pred eEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCC--ChH-------
Q 015058 259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKE------- 329 (414)
Q Consensus 259 ~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~--~~e------- 329 (414)
.+|+.+.|+..-||+..=+.|++.+.++.+. ...++.|+-++... +.+
T Consensus 283 kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe-----------------------~~~kvvliQi~~pSr~~v~~y~~~~~ 339 (486)
T COG0380 283 KLIVGVDRLDYSKGIPQRLLAFERLLEEYPE-----------------------WRGKVVLLQIAPPSREDVEEYQALRL 339 (486)
T ss_pred eEEEEehhcccccCcHHHHHHHHHHHHhChh-----------------------hhCceEEEEecCCCccccHHHHHHHH
Confidence 5999999999999999999999998864210 11246677666432 222
Q ss_pred HHHHHHHHc-------CCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCC----eEEEeeeCC
Q 015058 330 SYEEKIRRL-------RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRY----SLKLLWTCS 398 (414)
Q Consensus 330 ~l~~~i~~l-------~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~----Pvi~s~~~~ 398 (414)
++++.+.+- +..-|.|+...++.+++..+|+.||++++. +.-.|+-.+.-||.||.- |.|.|...|
T Consensus 340 ~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVt---plrDGMNLvakEyVa~q~~~~G~LiLSeFaG 416 (486)
T COG0380 340 QIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVT---PLRDGMNLVAKEYVAAQRDKPGVLILSEFAG 416 (486)
T ss_pred HHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeec---cccccccHHHHHHHHhhcCCCCcEEEecccc
Confidence 223333332 233688887668999999999999999853 334577788999988754 777777766
Q ss_pred cc
Q 015058 399 VV 400 (414)
Q Consensus 399 ~~ 400 (414)
--
T Consensus 417 aa 418 (486)
T COG0380 417 AA 418 (486)
T ss_pred ch
Confidence 43
|
|
| >PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.067 Score=52.86 Aligned_cols=85 Identities=9% Similarity=0.042 Sum_probs=58.8
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCC----------CcHHHHHHHHHHHHHhccCCE
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR----------RSHFVSIYRWIEKYYGKMANG 169 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~----------~~~~~~i~~~~Ek~~~k~ad~ 169 (414)
-+.||+|+.+. ..++++|.+++...|+|+++|-|+...--..+.... +..+.+++..+-+..|+.||.
T Consensus 171 P~advyHsvst--GyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~Ad~ 248 (268)
T PF11997_consen 171 PKADVYHSVST--GYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRAADR 248 (268)
T ss_pred CCCCEEecCCc--cHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhCe
Confidence 47799999975 356677888888899999999999832111111111 223356666667888999999
Q ss_pred EEEeCHHHHHHHHHhhCC
Q 015058 170 CLCVTQAMQHELAQNWGI 187 (414)
Q Consensus 170 ii~vS~~~~~~l~~~~gi 187 (414)
|++..+..++. +...|-
T Consensus 249 I~~l~~~n~~~-q~~~Ga 265 (268)
T PF11997_consen 249 ITPLYEYNREW-QIELGA 265 (268)
T ss_pred ecccchhhHHH-HHHhCC
Confidence 99999987764 333453
|
It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY. |
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.02 Score=61.57 Aligned_cols=108 Identities=13% Similarity=0.086 Sum_probs=78.9
Q ss_pred cccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCC---
Q 015058 251 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--- 327 (414)
Q Consensus 251 ~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~--- 327 (414)
+||+++. .+..+.++. .|=.+.+.+-..++.+. -|+-.|.+-|.|++
T Consensus 424 lglp~~a-vVf~c~~n~--~K~~pev~~~wmqIL~~---------------------------vP~Svl~L~~~~~~~~~ 473 (620)
T COG3914 424 LGLPEDA-VVFCCFNNY--FKITPEVFALWMQILSA---------------------------VPNSVLLLKAGGDDAEI 473 (620)
T ss_pred cCCCCCe-EEEEecCCc--ccCCHHHHHHHHHHHHh---------------------------CCCcEEEEecCCCcHHH
Confidence 4677653 233344444 45566666666666553 57878888887765
Q ss_pred hHHHHHHHHHcCCC--cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEE
Q 015058 328 KESYEEKIRRLRLK--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKL 393 (414)
Q Consensus 328 ~e~l~~~i~~l~l~--~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~ 393 (414)
...+++.+++.|+. |..|.+ ..+.++....|+.||+++ .+-+. +=.+...|++.+|+||++
T Consensus 474 ~~~l~~la~~~Gv~~eRL~f~p-~~~~~~h~a~~~iADlvL--DTyPY--~g~TTa~daLwm~vPVlT 536 (620)
T COG3914 474 NARLRDLAEREGVDSERLRFLP-PAPNEDHRARYGIADLVL--DTYPY--GGHTTASDALWMGVPVLT 536 (620)
T ss_pred HHHHHHHHHHcCCChhheeecC-CCCCHHHHHhhchhheee--ecccC--CCccchHHHHHhcCceee
Confidence 45889999999997 999996 889999999999999998 22222 123467999999999997
|
|
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.12 Score=51.98 Aligned_cols=102 Identities=18% Similarity=0.155 Sum_probs=65.0
Q ss_pred CCCeEEEEecc-CCCCC--ChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHH
Q 015058 256 NRPALVVSSTS-WTPDE--DFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (414)
Q Consensus 256 ~~~~~i~~vgr-l~~~K--g~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~ 332 (414)
+++.+++..|. +.+.| ..+...+.++.+.+ .+++++++|...+++..+
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~-----------------------------~~~~vvl~Gg~~e~~~~~ 229 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLID-----------------------------EGYQVVLFGSAKDHEAGN 229 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHH-----------------------------CCCeEEEEeCHHhHHHHH
Confidence 45566666655 43444 34456666665542 246888888666666666
Q ss_pred HHHHHcCCC---c-EEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEee
Q 015058 333 EKIRRLRLK---R-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLW 395 (414)
Q Consensus 333 ~~i~~l~l~---~-V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~ 395 (414)
+..+.++-. + +.+.| ..+-.++..+++.||++|+..+ | |+=+ |-|.|+|+|+..
T Consensus 230 ~i~~~~~~~~~~~~~~l~g-~~sL~el~ali~~a~l~I~nDT---G---p~Hl--AaA~g~P~valf 287 (348)
T PRK10916 230 EILAALNTEQQAWCRNLAG-ETQLEQAVILIAACKAIVTNDS---G---LMHV--AAALNRPLVALY 287 (348)
T ss_pred HHHHhcccccccceeeccC-CCCHHHHHHHHHhCCEEEecCC---h---HHHH--HHHhCCCEEEEE
Confidence 655544321 3 44554 7788999999999999996432 2 2222 778899999854
|
|
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.093 Score=51.97 Aligned_cols=100 Identities=17% Similarity=0.104 Sum_probs=63.0
Q ss_pred CCeEEEEeccCCCCCCh--HHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCCh-HHHHH
Q 015058 257 RPALVVSSTSWTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYEE 333 (414)
Q Consensus 257 ~~~~i~~vgrl~~~Kg~--~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~-e~l~~ 333 (414)
++.++++.|.=.+.|.. +...+.++.+.+ .+..++++|.|+.. +..++
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~-----------------------------~~~~~vl~~g~~~e~~~~~~ 229 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLA-----------------------------RGLQIVLPWGNDAEKQRAER 229 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHH-----------------------------CCCeEEEeCCCHHHHHHHHH
Confidence 44566666543355554 466666666643 14677887656543 44444
Q ss_pred HHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 334 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 334 ~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
..+. +.+..+.| ..+-.++..+++.||++|+..+ | |+=+ |-|.|+|+|+..-
T Consensus 230 i~~~--~~~~~l~g-~~sL~el~ali~~a~l~I~~DS---g---p~Hl--Aaa~g~P~i~lfg 281 (319)
T TIGR02193 230 IAEA--LPGAVVLP-KMSLAEVAALLAGADAVVGVDT---G---LTHL--AAALDKPTVTLYG 281 (319)
T ss_pred HHhh--CCCCeecC-CCCHHHHHHHHHcCCEEEeCCC---h---HHHH--HHHcCCCEEEEEC
Confidence 4433 33345666 7789999999999999996432 1 3322 6788999998653
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.3 Score=49.27 Aligned_cols=100 Identities=22% Similarity=0.229 Sum_probs=67.9
Q ss_pred CCeEEEEec-cCCCCCChH--HHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHH
Q 015058 257 RPALVVSST-SWTPDEDFG--ILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (414)
Q Consensus 257 ~~~~i~~vg-rl~~~Kg~~--~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~ 333 (414)
+|.++++.| +-...|... ...+.++.+.++ . .+++++|.+.+++..++
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~---------------------------~--~~Vvl~g~~~e~e~~~~ 225 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAK---------------------------G--YQVVLFGGPDEEERAEE 225 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHC---------------------------C--CEEEEecChHHHHHHHH
Confidence 456777777 665666543 666666666542 2 78889998766666666
Q ss_pred HHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEee
Q 015058 334 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLW 395 (414)
Q Consensus 334 ~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~ 395 (414)
..+.++- .+.+.| ..+-+++..+++.||++|+..+ | |+=+ |-|.|+|+|+.-
T Consensus 226 i~~~~~~-~~~l~~-k~sL~e~~~li~~a~l~I~~DS---g---~~Hl--AaA~~~P~I~iy 277 (334)
T COG0859 226 IAKGLPN-AVILAG-KTSLEELAALIAGADLVIGNDS---G---PMHL--AAALGTPTIALY 277 (334)
T ss_pred HHHhcCC-ccccCC-CCCHHHHHHHHhcCCEEEccCC---h---HHHH--HHHcCCCEEEEE
Confidence 6555432 223775 8899999999999999996532 2 2212 778899999854
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.07 Score=55.65 Aligned_cols=106 Identities=18% Similarity=0.160 Sum_probs=71.1
Q ss_pred cCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHH
Q 015058 253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (414)
Q Consensus 253 l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~ 332 (414)
+..++|.+.++.|+.... ..+++.+..... .-+.++++...+ .+..
T Consensus 233 ~~~d~~~vyvslGt~~~~---~~l~~~~~~a~~----------------------------~l~~~vi~~~~~-~~~~-- 278 (406)
T COG1819 233 IPADRPIVYVSLGTVGNA---VELLAIVLEALA----------------------------DLDVRVIVSLGG-ARDT-- 278 (406)
T ss_pred hcCCCCeEEEEcCCcccH---HHHHHHHHHHHh----------------------------cCCcEEEEeccc-cccc--
Confidence 355778788888888755 444554444332 124788887644 3222
Q ss_pred HHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc----------cc
Q 015058 333 EKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV----------VG 401 (414)
Q Consensus 333 ~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~----------~~ 401 (414)
..++. |+...+ |+|..+ ++..||++|+. . |. +.+.||++.|+|+|+-..+.+ .|
T Consensus 279 ----~~~~p~n~~v~~-~~p~~~---~l~~ad~vI~h-G---G~---gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G 343 (406)
T COG1819 279 ----LVNVPDNVIVAD-YVPQLE---LLPRADAVIHH-G---GA---GTTSEALYAGVPLVVIPDGADQPLNAERVEELG 343 (406)
T ss_pred ----cccCCCceEEec-CCCHHH---HhhhcCEEEec-C---Cc---chHHHHHHcCCCEEEecCCcchhHHHHHHHHcC
Confidence 22455 888886 888766 88999999963 2 22 258999999999999888875 47
Q ss_pred chhhhh
Q 015058 402 CLFVLF 407 (414)
Q Consensus 402 ~~~~~~ 407 (414)
|..++.
T Consensus 344 ~G~~l~ 349 (406)
T COG1819 344 AGIALP 349 (406)
T ss_pred CceecC
Confidence 775554
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.13 Score=52.77 Aligned_cols=62 Identities=11% Similarity=0.059 Sum_probs=41.8
Q ss_pred EEEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEee
Q 015058 317 LLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLW 395 (414)
Q Consensus 317 i~liI~G~G~~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~ 395 (414)
..|++.|.-. .+.+++...+. ..+.+.+ +...+|++||+.++. || +..+|++.+|+|.|...
T Consensus 200 ~~~~i~~a~~-~~~i~~~~~~~--~~~~~~~------~~~~~m~~aDlal~~----SG----T~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 200 KILVVPSFFK-GKDLKEIYGDI--SEFEISY------DTHKALLEAEFAFIC----SG----TATLEAALIGTPFVLAY 261 (347)
T ss_pred cEEEEeCCCc-HHHHHHHHhcC--CCcEEec------cHHHHHHhhhHHHhc----Cc----HHHHHHHHhCCCEEEEE
Confidence 6788887643 36666655432 2344432 446799999999853 23 25679999999999844
|
|
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=96.09 E-value=1.6 Score=42.86 Aligned_cols=181 Identities=19% Similarity=0.120 Sum_probs=97.8
Q ss_pred HHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHHHHHHhhCCcEEEecCCCCCCcC
Q 015058 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFH 201 (414)
Q Consensus 122 a~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~~l~~~~gi~i~vI~n~~~~~f~ 201 (414)
.+++.|.|+++--.++++ + ++. ..+++-+...+.+|.+.+=.+..++.+++ +|+++.+.++. .+..
T Consensus 94 ~a~~~~k~~~~~g~giGP------~--~~~---~~r~~~~~~l~~~~~i~vRD~~S~~~l~~-~g~~i~~~~D~--a~~l 159 (298)
T TIGR03609 94 LARLFGKPVILWGQGIGP------L--RRR---LSRWLVRRVLRGCRAISVRDAASYRLLKR-LGIPAELAADP--VWLL 159 (298)
T ss_pred HHHHcCCCEEEEecccCC------c--CCH---HHHHHHHHHHccCCEEEEeCHHHHHHHHH-hCCCceEeCCh--hhhC
Confidence 345578888765445432 1 111 23344456668999998888888887765 58876655533 2222
Q ss_pred CCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeEEEEeccCCC--CCChHHHHHH
Q 015058 202 PTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTP--DEDFGILLEA 279 (414)
Q Consensus 202 p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~--~Kg~~~LleA 279 (414)
+.... . . ....+++.+.+++..|.. ++..+.+.++
T Consensus 160 ~~~~~--~----~-------------------------------------~~~~~~~~i~i~~r~~~~~~~~~~~~l~~~ 196 (298)
T TIGR03609 160 PPEPW--P----G-------------------------------------GEPLPEPVIVVSLRPWPLLDVSRLLRLLRA 196 (298)
T ss_pred CCCcc--c----c-------------------------------------cccCCCCeEEEEECCCCcCCHHHHHHHHHH
Confidence 21100 0 0 001123345556555422 2234456666
Q ss_pred HHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHHHcCCC-cEEEecCCCChhhHHHH
Q 015058 280 ALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLL 358 (414)
Q Consensus 280 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~ 358 (414)
+..+.++. .-++.++=...+.+.+..++..+.+.-. +|. . ..+.+++-.+
T Consensus 197 l~~l~~~~--------------------------g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~--~-~~~~~e~~~~ 247 (298)
T TIGR03609 197 LDRLQRDT--------------------------GAFVLFLPFQQPQDLPLARALRDQLLGPAEVL--S-PLDPEELLGL 247 (298)
T ss_pred HHHHHHhh--------------------------CCeEEEEeCCcchhHHHHHHHHHhcCCCcEEE--e-cCCHHHHHHH
Confidence 66554320 1123332222234555555554444322 343 3 4488899999
Q ss_pred HhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 359 LGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 359 l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
+++||+.|..- -. .++=|+.+|+|+++...
T Consensus 248 i~~~~~vI~~R--lH------~~I~A~~~gvP~i~i~y 277 (298)
T TIGR03609 248 FASARLVIGMR--LH------ALILAAAAGVPFVALSY 277 (298)
T ss_pred HhhCCEEEEec--hH------HHHHHHHcCCCEEEeec
Confidence 99999998421 11 25779999999998643
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.83 Score=46.14 Aligned_cols=75 Identities=17% Similarity=0.028 Sum_probs=53.5
Q ss_pred EEEEEEcCCCChHHHHHHHHHcC--CCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe
Q 015058 317 LLFIITGKGPDKESYEEKIRRLR--LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL 394 (414)
Q Consensus 317 i~liI~G~G~~~e~l~~~i~~l~--l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s 394 (414)
..+.|+.+----++.++..+++- ...+.+.. .-+.+-|..+|+.||.+++...|. . =+.||.++|.||-..
T Consensus 183 ~~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~-~~~~nPy~~~La~ad~i~VT~DSv-----S-MvsEA~~tG~pV~v~ 255 (311)
T PF06258_consen 183 GSLLVTTSRRTPPEAEAALRELLKDNPGVYIWD-GTGENPYLGFLAAADAIVVTEDSV-----S-MVSEAAATGKPVYVL 255 (311)
T ss_pred CeEEEEcCCCCcHHHHHHHHHhhcCCCceEEec-CCCCCcHHHHHHhCCEEEEcCccH-----H-HHHHHHHcCCCEEEe
Confidence 78888887544445555554432 23674443 447778999999999998754332 2 389999999999998
Q ss_pred eeCC
Q 015058 395 WTCS 398 (414)
Q Consensus 395 ~~~~ 398 (414)
...+
T Consensus 256 ~l~~ 259 (311)
T PF06258_consen 256 PLPG 259 (311)
T ss_pred cCCC
Confidence 8887
|
The function of this family is unknown. |
| >PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.21 Score=46.06 Aligned_cols=65 Identities=23% Similarity=0.284 Sum_probs=38.0
Q ss_pred CCCcEEEEeCC-CCchHHHHHHHHHhh--cCCeEEE--EEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeC
Q 015058 100 ASPDVFLVQNP-PSVPTLVAVKWASSL--RRSAFIV--DWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVT 174 (414)
Q Consensus 100 ~~~Dvvh~~~p-p~~~~~~~~~la~~~--~~~~~Iv--~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS 174 (414)
.+||+|+++.| +++|..+++++.+.+ .|.++|+ +|-... ..+.-- |.+++.||..+++-
T Consensus 91 ~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES~aRv~---------~lSlTG-------klly~~aD~f~VQW 154 (170)
T PF08660_consen 91 ERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIESFARVK---------TLSLTG-------KLLYPFADRFIVQW 154 (170)
T ss_pred hCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEeeeecC---------CCchHH-------HHHHHhCCEEEEcC
Confidence 78999999988 333333333333211 2788876 232221 112111 24456799999999
Q ss_pred HHHHHH
Q 015058 175 QAMQHE 180 (414)
Q Consensus 175 ~~~~~~ 180 (414)
+++++.
T Consensus 155 ~~l~~~ 160 (170)
T PF08660_consen 155 EELAEK 160 (170)
T ss_pred HHHHhH
Confidence 998763
|
|
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.086 Score=51.27 Aligned_cols=98 Identities=20% Similarity=0.123 Sum_probs=65.3
Q ss_pred EEEEeccCCCCC--ChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHHH
Q 015058 260 LVVSSTSWTPDE--DFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRR 337 (414)
Q Consensus 260 ~i~~vgrl~~~K--g~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~ 337 (414)
+++..|.=.+.| ..+...+.++.+.+ . +.++++.|...+++..++..+.
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~----------------------------~-~~~ivl~g~~~e~~~~~~i~~~ 174 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLA----------------------------R-GARVVLTGGPAERELAEEIAAA 174 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHH----------------------------C-CCEEEEEechhhHHHHHHHHHh
Confidence 444444433333 44677888877764 2 5788999877777766666655
Q ss_pred cCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEee
Q 015058 338 LRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLW 395 (414)
Q Consensus 338 l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~ 395 (414)
.+-. .+.+.| ..+-.++..+++.||++|...+ | | +-=|.+.|+|+++..
T Consensus 175 ~~~~~~~~~~~-~~~l~e~~~li~~~~l~I~~Ds---g---~--~HlA~a~~~p~i~l~ 224 (279)
T cd03789 175 LGGPRVVNLAG-KTSLRELAALLARADLVVTNDS---G---P--MHLAAALGTPTVALF 224 (279)
T ss_pred cCCCccccCcC-CCCHHHHHHHHHhCCEEEeeCC---H---H--HHHHHHcCCCEEEEE
Confidence 4322 445565 6688999999999999996532 1 1 233578999999854
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.42 Score=44.31 Aligned_cols=157 Identities=11% Similarity=0.037 Sum_probs=74.8
Q ss_pred CCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCcEEEEeCCC
Q 015058 32 MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPP 111 (414)
Q Consensus 32 ~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp 111 (414)
.||+|..+|..... .. .+||++.+............-....+-....--......+..|..+-..||||+.|.-
T Consensus 2 ~gh~v~fl~~~~~~---~~--~~GV~~~~y~~~~~~~~~~~~~~~~~e~~~~rg~av~~a~~~L~~~Gf~PDvI~~H~G- 75 (171)
T PF12000_consen 2 RGHEVVFLTERKRP---PI--PPGVRVVRYRPPRGPTPGTHPYVRDFEAAVLRGQAVARAARQLRAQGFVPDVIIAHPG- 75 (171)
T ss_pred CCCEEEEEecCCCC---CC--CCCcEEEEeCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEcCC-
Confidence 39999999944322 11 1688888876211111111101111111111112222233334444568999999953
Q ss_pred CchHHHHHHHHHhh-cCCeEEE--EE-cCcchhhhhhccC---CCcHH----HHHHHHHHHHHhccCCEEEEeCHHHHHH
Q 015058 112 SVPTLVAVKWASSL-RRSAFIV--DW-HNFGYTLLSLSLG---RRSHF----VSIYRWIEKYYGKMANGCLCVTQAMQHE 180 (414)
Q Consensus 112 ~~~~~~~~~la~~~-~~~~~Iv--~~-H~~~~~l~~~~~~---~~~~~----~~i~~~~Ek~~~k~ad~ii~vS~~~~~~ 180 (414)
+--+++++-. ..+|+|. .| +..... ...+. ..+.- .++-....-.-...||..++.|+--++.
T Consensus 76 ----WGe~Lflkdv~P~a~li~Y~E~~y~~~g~--d~~FDpe~p~~~~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~~ 149 (171)
T PF12000_consen 76 ----WGETLFLKDVFPDAPLIGYFEFYYRASGA--DVGFDPEFPPSLDDRARLRMRNAHNLLALEQADAGISPTRWQRSQ 149 (171)
T ss_pred ----cchhhhHHHhCCCCcEEEEEEEEecCCCC--cCCCCCCCCCCHHHHHHHHHHhHHHHHHHHhCCcCcCCCHHHHHh
Confidence 2234455543 4788875 23 111000 01111 11111 1111111122235799999999876554
Q ss_pred HHHhhCCcEEEecCC-CCCCc
Q 015058 181 LAQNWGIKATVLYDQ-PPEFF 200 (414)
Q Consensus 181 l~~~~gi~i~vI~n~-~~~~f 200 (414)
.=..+.-++.||++| |++.+
T Consensus 150 fP~~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 150 FPAEFRSKISVIHDGIDTDRF 170 (171)
T ss_pred CCHHHHcCcEEeecccchhhc
Confidence 434344459999999 76654
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=94.59 E-value=6.1 Score=40.27 Aligned_cols=262 Identities=15% Similarity=0.104 Sum_probs=135.6
Q ss_pred CCCCCChHHHH---HHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHH
Q 015058 13 GDLGRSPRMQY---QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFF 89 (414)
Q Consensus 13 ~d~~~~~r~~~---~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~ 89 (414)
-|.+.++.+.. ...+|.++ ||+|.+.|..... ..+..+.-|++...+. ... ..... -.+......-.
T Consensus 5 iDI~n~~hvhfFk~lI~elekk-G~ev~iT~rd~~~-v~~LLd~ygf~~~~Ig--k~g---~~tl~---~Kl~~~~eR~~ 74 (346)
T COG1817 5 IDIGNPPHVHFFKNLIWELEKK-GHEVLITCRDFGV-VTELLDLYGFPYKSIG--KHG---GVTLK---EKLLESAERVY 74 (346)
T ss_pred EEcCCcchhhHHHHHHHHHHhC-CeEEEEEEeecCc-HHHHHHHhCCCeEeec--ccC---CccHH---HHHHHHHHHHH
Confidence 35565665554 34688886 9999998877533 3445556677776665 111 00111 01111111111
Q ss_pred HHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCE
Q 015058 90 MLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANG 169 (414)
Q Consensus 90 ~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ 169 (414)
.+.++. ...+||+...-++|- +.+. .+..|+|.|+-..+ +.+. ..+|.....||.
T Consensus 75 -~L~ki~-~~~kpdv~i~~~s~~-----l~rv-afgLg~psIi~~D~-ehA~----------------~qnkl~~Pla~~ 129 (346)
T COG1817 75 -KLSKII-AEFKPDVAIGKHSPE-----LPRV-AFGLGIPSIIFVDN-EHAE----------------AQNKLTLPLADV 129 (346)
T ss_pred -HHHHHH-hhcCCceEeecCCcc-----hhhH-HhhcCCceEEecCC-hhHH----------------HHhhcchhhhhh
Confidence 111222 237999876533321 2232 34467887763222 1110 124566789999
Q ss_pred EEEeCHHHHHHHHHhhCCc-E-EEecCC-----CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccce
Q 015058 170 CLCVTQAMQHELAQNWGIK-A-TVLYDQ-----PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETI 242 (414)
Q Consensus 170 ii~vS~~~~~~l~~~~gi~-i-~vI~n~-----~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (414)
+++.+-...+++.. +|.+ . .+-+|+ +...|.|.+ ++.++|+
T Consensus 130 ii~P~~~~~~~~~~-~G~~p~~i~~~~giae~~~v~~f~pd~-----evlkeLg-------------------------- 177 (346)
T COG1817 130 IITPEAIDEEELLD-FGADPNKISGYNGIAELANVYGFVPDP-----EVLKELG-------------------------- 177 (346)
T ss_pred eecccccchHHHHH-hCCCccceecccceeEEeecccCCCCH-----HHHHHcC--------------------------
Confidence 99888877777765 4765 2 333454 223366653 3444554
Q ss_pred eeeccccccccCCCCCeEEE-----EeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcE
Q 015058 243 FTSLAGIDVFLKPNRPALVV-----SSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRL 317 (414)
Q Consensus 243 ~~~~~~~~~~l~~~~~~~i~-----~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i 317 (414)
+.++.+.+|. .+.-..-+.+.+.+.++.+.+.+ ++
T Consensus 178 ----------l~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k----------------------------~g-- 217 (346)
T COG1817 178 ----------LEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKK----------------------------YG-- 217 (346)
T ss_pred ----------CCCCCceEEEeeccccceeeccccchhhHHHHHHHHHh----------------------------Cc--
Confidence 2232232332 12223345677778888888765 34
Q ss_pred EEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 318 LFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 318 ~liI~G~G~~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
.++|-=.+++++.+|. ..+++..- +.-|--.++=-||+.+-. + ++---||...|+|.|... .
T Consensus 218 iV~ipr~~~~~eife~------~~n~i~pk---~~vD~l~Llyya~lvig~----g----gTMarEaAlLGtpaIs~~-p 279 (346)
T COG1817 218 IVLIPREKEQAEIFEG------YRNIIIPK---KAVDTLSLLYYATLVIGA----G----GTMAREAALLGTPAISCY-P 279 (346)
T ss_pred EEEecCchhHHHHHhh------hccccCCc---ccccHHHHHhhhheeecC----C----chHHHHHHHhCCceEEec-C
Confidence 3333323333333332 22233222 333433466667777721 1 123579999999999887 5
Q ss_pred Cc
Q 015058 398 SV 399 (414)
Q Consensus 398 ~~ 399 (414)
|.
T Consensus 280 Gk 281 (346)
T COG1817 280 GK 281 (346)
T ss_pred Cc
Confidence 53
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=94.49 E-value=7.6 Score=40.98 Aligned_cols=76 Identities=9% Similarity=0.134 Sum_probs=47.6
Q ss_pred CCCcEEEEeCCCC------chHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEe
Q 015058 100 ASPDVFLVQNPPS------VPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCV 173 (414)
Q Consensus 100 ~~~Dvvh~~~pp~------~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~v 173 (414)
++.|+++...-.. ...... .+++++.|.|+++--+++++ + .++. .+++-++..+++|.|.+=
T Consensus 116 ~~aDlvI~gGG~lfqD~y~~~~~~y-~l~A~l~gkpv~l~gqsiGP------f-~~~~----~r~l~r~vl~~~~~ItvR 183 (426)
T PRK10017 116 SGYDAIIQVGGSFFVDLYGVPQFEH-ALCAFMAKKPLYMIGHSVGP------F-QDEQ----FNQLANYVFGHCDALILR 183 (426)
T ss_pred HhCCEEEECCCCccccCcccHHHHH-HHHHHHcCCCEEEECCcCCC------c-CCHH----HHHHHHHHHhcCCEEEEc
Confidence 6789876653111 111222 24566789999886677653 2 2222 334445667999999888
Q ss_pred CHHHHHHHHHhhCCc
Q 015058 174 TQAMQHELAQNWGIK 188 (414)
Q Consensus 174 S~~~~~~l~~~~gi~ 188 (414)
.+...+.|.+ +|++
T Consensus 184 D~~S~~~Lk~-lGv~ 197 (426)
T PRK10017 184 ESVSLDLMKR-SNIT 197 (426)
T ss_pred cHHHHHHHHH-hCCC
Confidence 8888888865 5886
|
|
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=94.33 E-value=0.13 Score=42.63 Aligned_cols=81 Identities=12% Similarity=0.025 Sum_probs=55.6
Q ss_pred EEEEcC-CCChHHHHHHHHHcCCCcEEE--ecCCCChh--hHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEE
Q 015058 319 FIITGK-GPDKESYEEKIRRLRLKRVAF--RTMWLSAE--DYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKL 393 (414)
Q Consensus 319 liI~G~-G~~~e~l~~~i~~l~l~~V~f--~g~~v~~e--d~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~ 393 (414)
++|+|. ....+.|++.+++.|.+.+.+ -+ ..... .++..+..||+.|++....+-...-..-=+|-..|+|++.
T Consensus 2 vliVGG~~~~~~~~~~~~~~~G~~~~~hg~~~-~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 2 VLIVGGREDRERRYKRILEKYGGKLIHHGRDG-GDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred EEEEcCCcccHHHHHHHHHHcCCEEEEEecCC-CCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEE
Confidence 456664 577889999999999986666 23 22333 4999999999998763322211122233455678999999
Q ss_pred eeeCCcc
Q 015058 394 LWTCSVV 400 (414)
Q Consensus 394 s~~~~~~ 400 (414)
+...|..
T Consensus 81 ~~~~~~~ 87 (97)
T PF10087_consen 81 SRSRGVS 87 (97)
T ss_pred ECCCCHH
Confidence 9988765
|
|
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.085 Score=50.04 Aligned_cols=102 Identities=15% Similarity=0.162 Sum_probs=56.8
Q ss_pred CCCeEEEEeccCCCCCChH--HHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCC-hHHHH
Q 015058 256 NRPALVVSSTSWTPDEDFG--ILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-KESYE 332 (414)
Q Consensus 256 ~~~~~i~~vgrl~~~Kg~~--~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~-~e~l~ 332 (414)
+++.++++.|.=.+.|... ...+.+..+.+ . ...++++|.+.+ .+++.
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~----------------------------~-~~~vvl~g~~~~~~~~~~ 154 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKE----------------------------R-GYRVVLLGGPEEQEKEIA 154 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCC----------------------------C-T-EEEE--SSHHHHHHHH
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHh----------------------------h-CceEEEEccchHHHHHHH
Confidence 4456777666655666644 35555555542 2 267888887666 23333
Q ss_pred HHHHH-cCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEee
Q 015058 333 EKIRR-LRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLW 395 (414)
Q Consensus 333 ~~i~~-l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~ 395 (414)
+.+.+ ..-..+.+.| ..+-.++..+++.||++|+..+. |+ ==|.|.|+|+|+..
T Consensus 155 ~~~~~~~~~~~~~~~~-~~~l~e~~ali~~a~~~I~~Dtg------~~--HlA~a~~~p~v~lf 209 (247)
T PF01075_consen 155 DQIAAGLQNPVINLAG-KTSLRELAALISRADLVIGNDTG------PM--HLAAALGTPTVALF 209 (247)
T ss_dssp HHHHTTHTTTTEEETT-TS-HHHHHHHHHTSSEEEEESSH------HH--HHHHHTT--EEEEE
T ss_pred HHHHHhcccceEeecC-CCCHHHHHHHHhcCCEEEecCCh------HH--HHHHHHhCCEEEEe
Confidence 33332 2222577776 77899999999999999975331 22 12788999999874
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.019 Score=51.56 Aligned_cols=70 Identities=16% Similarity=0.136 Sum_probs=43.8
Q ss_pred EEE-EEEcCCCChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEee
Q 015058 317 LLF-IITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLW 395 (414)
Q Consensus 317 i~l-iI~G~G~~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~ 395 (414)
.++ +++|+....+. ...++..+ .+|...+ +.++++.+|+.||+.|+- .| .+.+.|++++|+|.|.--
T Consensus 32 ~~viv~~G~~~~~~~-~~~~~~~~-~~v~~~~---~~~~m~~~m~~aDlvIs~----aG---~~Ti~E~l~~g~P~I~ip 99 (167)
T PF04101_consen 32 IQVIVQTGKNNYEEL-KIKVENFN-PNVKVFG---FVDNMAELMAAADLVISH----AG---AGTIAEALALGKPAIVIP 99 (167)
T ss_dssp CCCCCCCTTCECHHH-CCCHCCTT-CCCEEEC---SSSSHHHHHHHHSEEEEC----S----CHHHHHHHHCT--EEEE-
T ss_pred cEEEEEECCCcHHHH-HHHHhccC-CcEEEEe---chhhHHHHHHHcCEEEeC----CC---ccHHHHHHHcCCCeeccC
Confidence 444 45777644332 22233222 4788888 677899999999999952 22 347899999999998755
Q ss_pred eCC
Q 015058 396 TCS 398 (414)
Q Consensus 396 ~~~ 398 (414)
..+
T Consensus 100 ~~~ 102 (167)
T PF04101_consen 100 LPG 102 (167)
T ss_dssp -TT
T ss_pred CCC
Confidence 444
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=93.41 E-value=1 Score=48.31 Aligned_cols=76 Identities=11% Similarity=-0.089 Sum_probs=46.2
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhh-ccCCCcH--HHHHHHHH--HHHHhccCCEEEEeC
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSL-SLGRRSH--FVSIYRWI--EKYYGKMANGCLCVT 174 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~-~~~~~~~--~~~i~~~~--Ek~~~k~ad~ii~vS 174 (414)
.+||+||.|.. -++.+|.+++...|+|...+-|...-+-+.- +..+... .+++...+ |....+.||.|||-|
T Consensus 400 ~~PdlI~GnYs---DgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST 476 (550)
T PF00862_consen 400 GKPDLIIGNYS---DGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITST 476 (550)
T ss_dssp S--SEEEEEHH---HHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESS
T ss_pred CCCcEEEeccC---cchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcc
Confidence 78999999986 5667777888889999999999986543321 1111111 13444444 456668899999988
Q ss_pred HHHH
Q 015058 175 QAMQ 178 (414)
Q Consensus 175 ~~~~ 178 (414)
..-.
T Consensus 477 ~QEI 480 (550)
T PF00862_consen 477 YQEI 480 (550)
T ss_dssp HHHH
T ss_pred hHhh
Confidence 6544
|
4.1.13 from EC in the following reaction: |
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=93.11 E-value=14 Score=39.23 Aligned_cols=64 Identities=11% Similarity=0.094 Sum_probs=39.5
Q ss_pred cEEEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccE--EEeeccCCCCCCCchhHHHHHHcCCeEEE
Q 015058 316 RLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADL--GVCLHTSSSGLDLPMKVCYCWYSRYSLKL 393 (414)
Q Consensus 316 ~i~liI~G~G~~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl--~V~~~~s~~g~~lP~kl~Eama~G~Pvi~ 393 (414)
+..|+++.+++. +.+++... .++...+ |+|.++ +|+-+++ ||. |. | -+.++|++++|+|+|+
T Consensus 303 ~~~~lw~~~~~~-~~~~~~~~----~~~~v~~-w~pQ~~---iL~h~~v~~fvt-Hg---G---~nS~~eal~~GvP~l~ 366 (459)
T PLN02448 303 GVRFLWVARGEA-SRLKEICG----DMGLVVP-WCDQLK---VLCHSSVGGFWT-HC---G---WNSTLEAVFAGVPMLT 366 (459)
T ss_pred CCCEEEEEcCch-hhHhHhcc----CCEEEec-cCCHHH---HhccCccceEEe-cC---c---hhHHHHHHHcCCCEEe
Confidence 357776655442 22333321 2677775 999777 4555666 552 21 2 2478999999999998
Q ss_pred ee
Q 015058 394 LW 395 (414)
Q Consensus 394 s~ 395 (414)
--
T Consensus 367 ~P 368 (459)
T PLN02448 367 FP 368 (459)
T ss_pred cc
Confidence 43
|
|
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=92.62 E-value=0.49 Score=47.09 Aligned_cols=70 Identities=16% Similarity=0.044 Sum_probs=46.2
Q ss_pred cEEEEEEcCCC-ChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe
Q 015058 316 RLLFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL 394 (414)
Q Consensus 316 ~i~liI~G~G~-~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s 394 (414)
+..+++.|.|+ +++..++. .+. ...+.+.| ..+-.++..+++.||++|+..+ | |+=+ |-|+|+|+|+.
T Consensus 210 ~~~ivl~~G~~~e~~~~~~i-~~~-~~~~~l~g-~~sL~elaali~~a~l~I~nDS---G---p~Hl--A~A~g~p~val 278 (322)
T PRK10964 210 GLRIKLPWGAEHEEQRAKRL-AEG-FPYVEVLP-KLSLEQVARVLAGAKAVVSVDT---G---LSHL--TAALDRPNITL 278 (322)
T ss_pred CCeEEEeCCCHHHHHHHHHH-Hcc-CCcceecC-CCCHHHHHHHHHhCCEEEecCC---c---HHHH--HHHhCCCEEEE
Confidence 45667763354 44444444 332 23566776 7799999999999999996432 2 2222 78899999985
Q ss_pred ee
Q 015058 395 WT 396 (414)
Q Consensus 395 ~~ 396 (414)
.-
T Consensus 279 fG 280 (322)
T PRK10964 279 YG 280 (322)
T ss_pred EC
Confidence 53
|
|
| >COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=92.57 E-value=15 Score=38.38 Aligned_cols=191 Identities=15% Similarity=0.081 Sum_probs=104.8
Q ss_pred HHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHHHHHHhhCCcEEEecCCCCCC
Q 015058 120 KWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEF 199 (414)
Q Consensus 120 ~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~~l~~~~gi~i~vI~n~~~~~ 199 (414)
..++++.+.|+++--|+.++. . ....+|+-++..+++..+++=.+...+.|.+ +|++..... |+.+
T Consensus 117 ~~la~l~~kp~~~~g~svGP~--------~---~~~s~~~~~~~~~~~s~i~vRD~~S~~llk~-~gi~a~l~~--D~Af 182 (385)
T COG2327 117 ILLARLAGKPTFFFGQSVGPL--------K---HPLSRQLLNYVLGGCSAISVRDPVSYELLKQ-LGINARLVT--DPAF 182 (385)
T ss_pred HHHHHHcCCCEEEEeccCCCc--------c---CHHHHHHHHHHhcCCcEEEEecHHhHHHHHH-cCCCeEeec--Ccce
Confidence 555677899998876776541 1 1233455567778899999888899988874 699865554 5544
Q ss_pred cCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHH----
Q 015058 200 FHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGI---- 275 (414)
Q Consensus 200 f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~---- 275 (414)
-.|.+.++.... . ...+. +.+.++..-|.+....+.
T Consensus 183 ~L~~~~~~~~~~---~------------------------------------~~~~~-~~~~i~lr~~~~~~t~~~~~~~ 222 (385)
T COG2327 183 LLPASSQNATAS---D------------------------------------VEARE-KTVAITLRGLHPDNTAQRSILK 222 (385)
T ss_pred eccccccccccc---c------------------------------------ccccc-ceEEEEecccCCchhhhHHHHH
Confidence 443321111000 0 01112 235555555555333222
Q ss_pred -HHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHHHcC-CCcEEEecCCCChh
Q 015058 276 -LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLR-LKRVAFRTMWLSAE 353 (414)
Q Consensus 276 -LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~l~-l~~V~f~g~~v~~e 353 (414)
+-++........ . ..-.++++-.+.=.+..-.++..+... ..++.+.-.. ..+
T Consensus 223 ~v~~~l~~~~~~~-------------------~-----~~~~i~~~~~~~s~d~~va~~ia~~~~~~~~i~~~~d~-~~~ 277 (385)
T COG2327 223 YVNEALDLVERQV-------------------K-----ALWRITLIDYGASDDLAVADAIAQLVLDSAEILVSSDE-YAE 277 (385)
T ss_pred HHHHHHHHHHHhh-------------------h-----cceEEEeeeccccchhHHHHHHHhhcCCccceEeecch-HHH
Confidence 233333321110 0 011244444555344444444444433 2477776422 257
Q ss_pred hHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 354 DYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 354 d~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
++-..++++|+.|..-. = .++=|++.|.|+|+-...
T Consensus 278 ~~~~~l~~~dl~Vg~R~-------H-saI~al~~g~p~i~i~Y~ 313 (385)
T COG2327 278 ELGGILAACDLIVGMRL-------H-SAIMALAFGVPAIAIAYD 313 (385)
T ss_pred HHHHHhccCceEEeehh-------H-HHHHHHhcCCCeEEEeec
Confidence 78889999999994311 1 246699999999997654
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=91.68 E-value=0.11 Score=41.76 Aligned_cols=27 Identities=4% Similarity=-0.236 Sum_probs=22.4
Q ss_pred CCCchhHHHHHHcCCeEEEeeeCCccc
Q 015058 375 LDLPMKVCYCWYSRYSLKLLWTCSVVG 401 (414)
Q Consensus 375 ~~lP~kl~Eama~G~Pvi~s~~~~~~~ 401 (414)
.+++++++|+||||.|+|+.+..+...
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~~~~~~ 35 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDSPGLRE 35 (92)
T ss_pred CCCchHHHHHHHCCCeEEECChHHHHH
Confidence 457889999999999999988755443
|
|
| >PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [] | Back alignment and domain information |
|---|
Probab=90.66 E-value=2.2 Score=38.57 Aligned_cols=70 Identities=14% Similarity=0.247 Sum_probs=44.7
Q ss_pred hcCCCcEEEEeCCCCchHHH-HHHHHHhh-c-CCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeC
Q 015058 98 KIASPDVFLVQNPPSVPTLV-AVKWASSL-R-RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVT 174 (414)
Q Consensus 98 k~~~~Dvvh~~~pp~~~~~~-~~~la~~~-~-~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS 174 (414)
+..+||+|++..|. ++.+ ++.+-.+. . ++|++.-+=|+.. . .+ -|+...+|..++.|
T Consensus 86 ~~~~PD~IIsThp~--~~~~~l~~lk~~~~~~~~p~~tvvTD~~~------~--H~----------~W~~~~~D~y~Vas 145 (169)
T PF06925_consen 86 REFQPDLIISTHPF--PAQVPLSRLKRRGRLPNIPVVTVVTDFDT------V--HP----------FWIHPGVDRYFVAS 145 (169)
T ss_pred hhcCCCEEEECCcc--hhhhHHHHHHHhhcccCCcEEEEEcCCCC------C--Cc----------CeecCCCCEEEECC
Confidence 35899999988872 3444 44332222 3 5676543334310 0 11 14558899999999
Q ss_pred HHHHHHHHHhhCCc
Q 015058 175 QAMQHELAQNWGIK 188 (414)
Q Consensus 175 ~~~~~~l~~~~gi~ 188 (414)
+.+++.+.+. |++
T Consensus 146 e~~~~~l~~~-Gi~ 158 (169)
T PF06925_consen 146 EEVKEELIER-GIP 158 (169)
T ss_pred HHHHHHHHHc-CCC
Confidence 9999999985 987
|
; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process |
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
Probab=89.77 E-value=1.1 Score=37.24 Aligned_cols=73 Identities=10% Similarity=-0.038 Sum_probs=42.3
Q ss_pred CCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEE
Q 015058 53 HPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV 132 (414)
Q Consensus 53 ~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv 132 (414)
.+|++++++|.++.-. ....|. +..++.++..++. .+++||||.|...+..+ -=+.+.++..|.+.|+
T Consensus 13 tngLKVYYlP~~~~~~--~~t~Pt--------~~~~~pl~R~Ili-rE~I~IVHgH~a~S~l~-hE~i~hA~~mGlktVf 80 (90)
T PF08288_consen 13 TNGLKVYYLPLKVFYN--QCTLPT--------LFGSFPLLRNILI-RERIDIVHGHQAFSTLC-HEAILHARTMGLKTVF 80 (90)
T ss_pred CCCeEEEeecchhhhc--CcchHH--------HHHhhHHHHHHHH-HcCeeEEEeehhhhHHH-HHHHHHHHhCCCcEEe
Confidence 5789999999433211 111121 1122222222222 38999999998632211 1255667888999999
Q ss_pred EEcCc
Q 015058 133 DWHNF 137 (414)
Q Consensus 133 ~~H~~ 137 (414)
|=|+.
T Consensus 81 TDHSL 85 (90)
T PF08288_consen 81 TDHSL 85 (90)
T ss_pred ecccc
Confidence 88875
|
These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process |
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=88.84 E-value=3.7 Score=42.52 Aligned_cols=60 Identities=10% Similarity=-0.001 Sum_probs=45.1
Q ss_pred cEEEecCCCCh-hhHHHHHhhccEEEeeccCCCCC---CCchhHHHHHHcCCeEEEeeeCCcccc
Q 015058 342 RVAFRTMWLSA-EDYPLLLGSADLGVCLHTSSSGL---DLPMKVCYCWYSRYSLKLLWTCSVVGC 402 (414)
Q Consensus 342 ~V~f~g~~v~~-ed~~~~l~~aDl~V~~~~s~~g~---~lP~kl~Eama~G~Pvi~s~~~~~~~~ 402 (414)
++...| +++. ..++..+.--|+.+..+..+-.. ++++.++|+++||.|.+++...+.-|.
T Consensus 238 ~~~yIg-~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~ 301 (373)
T COG4641 238 NVQYIG-YYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKF 301 (373)
T ss_pred hhhhhh-ccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHh
Confidence 677776 6544 89999999999988543333222 248999999999999999888766554
|
|
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=88.32 E-value=3 Score=40.53 Aligned_cols=48 Identities=15% Similarity=0.054 Sum_probs=36.2
Q ss_pred CCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 339 RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 339 ~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
+..++.+.. +.-++..++..||..|+.+ |+ +-+||+..|+||++.-..
T Consensus 180 ~~~~~~~~~---~~~~~~~Ll~~s~~Vvtin-St-------vGlEAll~gkpVi~~G~~ 227 (269)
T PF05159_consen 180 NLPNVVIID---DDVNLYELLEQSDAVVTIN-ST-------VGLEALLHGKPVIVFGRA 227 (269)
T ss_pred cCCCeEEEC---CCCCHHHHHHhCCEEEEEC-CH-------HHHHHHHcCCceEEecCc
Confidence 345677766 6778999999999998542 22 349999999999985443
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=84.35 E-value=62 Score=34.55 Aligned_cols=42 Identities=17% Similarity=0.116 Sum_probs=30.8
Q ss_pred CcEEEecCCCChhhHHHHHhhccE--EEeeccCCCCCCCchhHHHHHHcCCeEEE
Q 015058 341 KRVAFRTMWLSAEDYPLLLGSADL--GVCLHTSSSGLDLPMKVCYCWYSRYSLKL 393 (414)
Q Consensus 341 ~~V~f~g~~v~~ed~~~~l~~aDl--~V~~~~s~~g~~lP~kl~Eama~G~Pvi~ 393 (414)
+++...+ |+|..+ +|+.+++ ||+ | .| -+.++|++++|+|+|+
T Consensus 345 ~g~~v~~-w~PQ~~---iL~h~~v~~fvt-H---~G---~nS~~Eal~~GVP~v~ 388 (482)
T PLN03007 345 KGLIIRG-WAPQVL---ILDHQATGGFVT-H---CG---WNSLLEGVAAGLPMVT 388 (482)
T ss_pred CCEEEec-CCCHHH---HhccCccceeee-c---Cc---chHHHHHHHcCCCeee
Confidence 3788886 999865 6777776 552 2 22 2368999999999998
|
|
| >KOG3349 consensus Predicted glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.32 E-value=9.7 Score=35.03 Aligned_cols=100 Identities=21% Similarity=0.219 Sum_probs=59.6
Q ss_pred EEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEE-EcCC-CCh-HHHHHHHH
Q 015058 260 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII-TGKG-PDK-ESYEEKIR 336 (414)
Q Consensus 260 ~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI-~G~G-~~~-e~l~~~i~ 336 (414)
+.+++|.-. +|.||.++.. |-|++|+.. ..+ .+++| +|+| +-- +...+..+
T Consensus 6 vFVTVGtT~----Fd~LI~~Vl~-----------------~~~~~~L~k---~G~--~kLiiQ~Grg~~~~~d~~~~~~k 59 (170)
T KOG3349|consen 6 VFVTVGTTS----FDDLISCVLS-----------------EEFLQELQK---RGF--TKLIIQIGRGQPFFGDPIDLIRK 59 (170)
T ss_pred EEEEecccc----HHHHHHHHcC-----------------HHHHHHHHH---cCc--cEEEEEecCCccCCCCHHHhhcc
Confidence 556676654 8889888642 224444433 012 35555 8998 321 22222223
Q ss_pred HcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 337 RLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 337 ~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
.-|+. |.... ....+.++++.||+.++ |. |-| .++|-+..|+|.|+-..
T Consensus 60 ~~gl~-id~y~---f~psl~e~I~~AdlVIs-HA---GaG---S~letL~l~KPlivVvN 108 (170)
T KOG3349|consen 60 NGGLT-IDGYD---FSPSLTEDIRSADLVIS-HA---GAG---SCLETLRLGKPLIVVVN 108 (170)
T ss_pred cCCeE-EEEEe---cCccHHHHHhhccEEEe-cC---Ccc---hHHHHHHcCCCEEEEeC
Confidence 33333 33333 67788889999999995 22 222 68999999999997543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 414 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-04 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 1e-04 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 5e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 2e-05
Identities = 53/327 (16%), Positives = 93/327 (28%), Gaps = 82/327 (25%)
Query: 101 SPDVFLVQNPPSVPTLVAVK-WASSLRRSAFIVDWHN---FGYTLLSLSLGRRSHFVS-- 154
VF N + + ++ LR + ++ G T ++L +
Sbjct: 122 DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL-IDGVLGSGKTWVALDVCLSYKVQCKM 180
Query: 155 ---IYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHEL 211
I+ W+ L + Q + +++ NW T D H +
Sbjct: 181 DFKIF-WLNLKNCNSPETVLEMLQKLLYQIDPNW----TSRSDHSSNIKLRI-----HSI 230
Query: 212 FCRLNKILHQP-----LGVQDCVSNGMEGQKAD---ETIFT----SLAGIDVFLKPNRPA 259
L ++L L V V N + + + T + +
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHIS 290
Query: 260 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNE---EVFLKEISDG------- 309
L S + TPDE +LL+ R + E +TN + + I DG
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDC---RPQDLPREVLTTNPRRLSIIAESIRDGLATWDNW 347
Query: 310 KQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLH 369
K +L II + S L+ +R M+ L V
Sbjct: 348 KHVNCDKLTTII------ESSLNV------LEPAEYRKMFD------------RLSVF-- 381
Query: 370 TSSSGLDLPMKVCYCWYSRYSLKLLWT 396
+P + L L+W
Sbjct: 382 --PPSAHIPTIL---------LSLIWF 397
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.8 bits (97), Expect = 4e-04
Identities = 51/334 (15%), Positives = 91/334 (27%), Gaps = 106/334 (31%)
Query: 46 PHAAILEHP----------SIHIHTMTQWPTIPR-GLPKVLKPVLLLLKPLIQ---FFML 91
P + +P + T W + L +++ L +L+P F L
Sbjct: 319 PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRL 378
Query: 92 LWFLC-VKIASPDVFLV---QNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLG 147
F I + + S +V K + S ++ S+ L
Sbjct: 379 SVFPPSAHI-PTILLSLIWFDVIKSDVMVVVNK---LHKYSLVEKQPKESTISIPSIYLE 434
Query: 148 RRSHFVSIY----RWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVL--YDQPPEFF- 200
+ + Y ++ Y + + L Y F+
Sbjct: 435 LKVKLENEYALHRSIVDHYNIPK---TFD-----------SDDLIPPYLDQY-----FYS 475
Query: 201 ----HPTSLE--EKHELFCRL--------NKILHQPLGVQDCVSNGMEGQKADETIFTSL 246
H ++E E+ LF + KI H D + G + L
Sbjct: 476 HIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRH------DSTAWNASGSILN--TLQQL 527
Query: 247 AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEI 306
++ N P Y+R V AIL+ FL +I
Sbjct: 528 KFYKPYICDNDPK-----------------------YERLVNAILD---------FLPKI 555
Query: 307 SDGKQYLYP--RLLFIITGKGPDKESYEEKIRRL 338
+ LL I D+ +EE +++
Sbjct: 556 EE-NLICSKYTDLLRIAL-MAEDEAIFEEAHKQV 587
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 43/361 (11%), Positives = 103/361 (28%), Gaps = 119/361 (32%)
Query: 24 QALSLARQMS---LEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLL 80
L +Q++ E+ + G P +P+I+ H + + + L
Sbjct: 32 VGTELGKQLAERGHEIHFITSGL--PFRLNKVYPNIYFH---EVTVNQYSVFQYPPYDLA 86
Query: 81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSA--FIVDWHNFG 138
L + + + + D+ V +P + A + + H
Sbjct: 87 LASKMAEV--------AQRENLDILHVHYA--IPHAICAYLAKQMIGERIKIVTTLHGTD 136
Query: 139 YTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLY--- 193
T+L + ++ + ++ V+ ++ +E + +Y
Sbjct: 137 ITVLGSD--------PSLNNLIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFI 188
Query: 194 DQPPEFFHPTSLEE-KHELFCRLNK--ILHQPLGVQDCVSNGMEGQKADETIFTSLAGID 250
D + + + K E ++ ++H +SN K +
Sbjct: 189 D--ERVYFKRDMTQLKKEYGISESEKILIH--------ISN-FRKVK----------RVQ 227
Query: 251 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGK 310
+++A A I+ E D+
Sbjct: 228 D------------------------VVQAF-------AKIVTEVDAK------------- 243
Query: 311 QYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAF---RTMWLSAEDYPLLLGSADLGV 366
++ G GP+ + + ++ L + RV F + ++ LL +DL +
Sbjct: 244 --------LLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQ------DNVAELLAMSDLML 289
Query: 367 C 367
Sbjct: 290 L 290
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 39.4 bits (93), Expect = 5e-04
Identities = 9/52 (17%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Query: 314 YPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADL 364
++ ++ GKGPD++ + ++L + F +++ + +L + L
Sbjct: 30 KQDIVLLLKGKGPDEKKIKLLAQKLGVKAEFGF----VNSNELLEILKTCTL 77
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 414 | |||
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.97 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.97 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.97 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.97 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.96 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.96 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.96 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.95 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.94 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.94 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.94 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.92 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.91 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.89 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.89 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.86 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.84 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.83 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.83 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.82 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.82 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.8 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.74 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.7 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.69 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.65 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.64 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.63 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.55 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.47 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.44 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.44 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.44 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.39 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.28 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.23 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.0 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 98.88 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 98.83 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 98.76 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 98.61 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 98.55 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 98.52 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 98.4 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 97.86 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 97.68 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 97.51 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 96.98 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 96.82 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 96.8 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 96.59 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 96.57 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 96.52 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 96.34 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 96.15 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 95.84 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 95.44 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 95.42 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 93.72 |
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=284.86 Aligned_cols=305 Identities=14% Similarity=0.034 Sum_probs=211.2
Q ss_pred HHHHHHHHHHhhCCCcEEEEecCCCCCCccc-----------------ccCCCeEEEEeecCCCCCC-CCCC-chHH-HH
Q 015058 20 RMQYQALSLARQMSLEVDVVAYGGSKPHAAI-----------------LEHPSIHIHTMTQWPTIPR-GLPK-VLKP-VL 79 (414)
Q Consensus 20 r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~-----------------~~~~~i~i~~v~~~~~~~~-~~~~-~~~~-~~ 79 (414)
.+...+..|+++ ||+|+|+|.......... ...+++++++++. ....+ .... .... ..
T Consensus 23 ~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~-~~~~~~~~~~~~~~~~~~ 100 (439)
T 3fro_A 23 ALTAISEALASL-GHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGG-GLLDSEDVYGPGWDGLIR 100 (439)
T ss_dssp HHHHHHHHHHHT-TCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEEES-GGGGCSSTTCSHHHHHHH
T ss_pred HHHHHHHHHHHC-CCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEecc-hhccccccccCCcchhhh
Confidence 355667788886 999999997654321110 0457999999983 11111 0000 0111 22
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhh-hccCCCcHH---HHH
Q 015058 80 LLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLS-LSLGRRSHF---VSI 155 (414)
Q Consensus 80 ~l~k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~-~~~~~~~~~---~~i 155 (414)
...........++..++.+..+||+||+|++ ....++.++++..++|+|+++|+....... ..+...... ...
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~---~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 177 (439)
T 3fro_A 101 KAVTFGRASVLLLNDLLREEPLPDVVHFHDW---HTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYP 177 (439)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCCCSEEEEESG---GGHHHHHHHHHHHCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSS
T ss_pred hhHHHHHHHHHHHHHHhccCCCCeEEEecch---hhhhhHHHHhhccCCCEEEEecccccccCchHHhCccccccccccc
Confidence 2222222222233333223579999999986 555666677777899999999997421000 000000000 000
Q ss_pred HHHHHHHHhccCCEEEEeCHHHHHHHHHhh---CCcEEEecCC-CCCCcCCC-----ChHHHHHHHHHhhhhccCCCCcc
Q 015058 156 YRWIEKYYGKMANGCLCVTQAMQHELAQNW---GIKATVLYDQ-PPEFFHPT-----SLEEKHELFCRLNKILHQPLGVQ 226 (414)
Q Consensus 156 ~~~~Ek~~~k~ad~ii~vS~~~~~~l~~~~---gi~i~vI~n~-~~~~f~p~-----~~~~~~~l~~~l~~~~~~~~~~~ 226 (414)
..++++...+.||.++|+|+.+++.....+ ..++.+|||+ |.+.|.|. ....+.+++++++
T Consensus 178 ~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~---------- 247 (439)
T 3fro_A 178 DIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFG---------- 247 (439)
T ss_dssp EECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHT----------
T ss_pred eeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcC----------
Confidence 115677888999999999999998855533 2349999999 88888775 2234556665543
Q ss_pred ccccCCCCCCCCccceeeeccccccccCCCCCeEEEEeccCC-CCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhh
Q 015058 227 DCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKE 305 (414)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~-~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~ 305 (414)
++++ .+++++||+. +.||++.+++|++.+.+
T Consensus 248 --------------------------~~~~--~~i~~~G~~~~~~Kg~~~li~a~~~l~~-------------------- 279 (439)
T 3fro_A 248 --------------------------MDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSS-------------------- 279 (439)
T ss_dssp --------------------------CCSC--EEEEEECCSSCTTBCHHHHHHHHHHHHT--------------------
T ss_pred --------------------------CCCC--cEEEEEcccccccccHHHHHHHHHHHHh--------------------
Confidence 4444 5999999999 99999999999999875
Q ss_pred hcCCccCCC--CcEEEEEEcCCCCh--HHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhH
Q 015058 306 ISDGKQYLY--PRLLFIITGKGPDK--ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKV 381 (414)
Q Consensus 306 ~~~~~~~~~--p~i~liI~G~G~~~--e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl 381 (414)
.. |+++|+|+|+|+.+ +.+++++++++ +.+.|.| +++.++++.+|++||++|+|+. .+++|+++
T Consensus 280 -------~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~-~~~~~~g-~~~~~~~~~~~~~adv~v~ps~---~e~~~~~~ 347 (439)
T 3fro_A 280 -------KKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITE-MLSREFVRELYGSVDFVIIPSY---FEPFGLVA 347 (439)
T ss_dssp -------SGGGGGEEEEEECCCCHHHHHHHHHHHHHCT-TEEEECS-CCCHHHHHHHHTTCSEEEECBS---CCSSCHHH
T ss_pred -------cccCCCeEEEEEcCCChhHHHHHHHHHhhcC-CEEEEcC-CCCHHHHHHHHHHCCEEEeCCC---CCCccHHH
Confidence 23 78999999999987 99999999999 7777876 9999999999999999998743 47899999
Q ss_pred HHHHHcCCeEEEeeeCCc
Q 015058 382 CYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 382 ~Eama~G~Pvi~s~~~~~ 399 (414)
+||||||+|||+++++|.
T Consensus 348 ~EAma~G~Pvi~s~~~~~ 365 (439)
T 3fro_A 348 LEAMCLGAIPIASAVGGL 365 (439)
T ss_dssp HHHHHTTCEEEEESSTHH
T ss_pred HHHHHCCCCeEEcCCCCc
Confidence 999999999999998653
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=282.26 Aligned_cols=299 Identities=15% Similarity=0.085 Sum_probs=208.0
Q ss_pred HHHHHHHHHhhCCCcEEEEecCCCCCCccc-ccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHH-hhh
Q 015058 21 MQYQALSLARQMSLEVDVVAYGGSKPHAAI-LEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFL-CVK 98 (414)
Q Consensus 21 ~~~~a~~La~~~g~eV~vv~~~~~~~~~~~-~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l-~~k 98 (414)
+...+..|+++ ||+|+|+|.......... ...+++++++++. .......+. .....+..+... +... +.+
T Consensus 48 ~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~--~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~ 119 (438)
T 3c48_A 48 ILSTATELAKQ-GIEVDIYTRATRPSQGEIVRVAENLRVINIAA--GPYEGLSKE-ELPTQLAAFTGG----MLSFTRRE 119 (438)
T ss_dssp HHHHHHHHHHT-TCEEEEEEECCCGGGCSEEEEETTEEEEEECC--SCSSSCCGG-GGGGGHHHHHHH----HHHHHHHH
T ss_pred HHHHHHHHHhc-CCEEEEEecCCCCCCcccccccCCeEEEEecC--CCccccchh-HHHHHHHHHHHH----HHHHHHhc
Confidence 44566777775 999999998754211111 2247899999873 221111111 111111111111 1111 222
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCC-CcHHHHHHHHHHHHHhccCCEEEEeCHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR-RSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~-~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~ 177 (414)
..+||+||+|.+ ....++.++++..++|+|+++|+..... ...+.. .........++|+++++.||.++|+|+.+
T Consensus 120 ~~~~Div~~~~~---~~~~~~~~~~~~~~~p~v~~~h~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 195 (438)
T 3c48_A 120 KVTYDLIHSHYW---LSGQVGWLLRDLWRIPLIHTAHTLAAVK-NSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEE 195 (438)
T ss_dssp TCCCSEEEEEHH---HHHHHHHHHHHHHTCCEEEECSSCHHHH-SCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHH
T ss_pred cCCCCEEEeCCc---cHHHHHHHHHHHcCCCEEEEecCCcccc-cccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHH
Confidence 235999999975 4455566667777999999999974211 000111 11113344567889999999999999999
Q ss_pred HHHHHHhhCCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeecccccccc
Q 015058 178 QHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL 253 (414)
Q Consensus 178 ~~~l~~~~gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 253 (414)
++.+.+.+|++ +.+|||+ |.+.|.|.+...+.+++++++ +
T Consensus 196 ~~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~------------------------------------~ 239 (438)
T 3c48_A 196 MQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELG------------------------------------I 239 (438)
T ss_dssp HHHHHHHHCCCGGGEEECCCCCCTTTSCCC----CHHHHHHTT------------------------------------C
T ss_pred HHHHHHHhCCChhheEEecCCccccccCCcccchhhhhHHhcC------------------------------------C
Confidence 99998877864 8999999 777787764333334555543 4
Q ss_pred CCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCC--cEEEEEEcC----CCC
Q 015058 254 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP--RLLFIITGK----GPD 327 (414)
Q Consensus 254 ~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~i~liI~G~----G~~ 327 (414)
++++ .+++++||+.++||++.+++|++.+.++ +| +++|+|+|+ |+.
T Consensus 240 ~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~~---------------------------~p~~~~~l~i~G~~~~~g~~ 291 (438)
T 3c48_A 240 PLHT-KVVAFVGRLQPFKGPQVLIKAVAALFDR---------------------------DPDRNLRVIICGGPSGPNAT 291 (438)
T ss_dssp CSSS-EEEEEESCBSGGGCHHHHHHHHHHHHHH---------------------------CTTCSEEEEEECCBC-----
T ss_pred CCCC-cEEEEEeeecccCCHHHHHHHHHHHHhh---------------------------CCCcceEEEEEeCCCCCCcH
Confidence 4454 4899999999999999999999999863 45 799999999 999
Q ss_pred hHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 328 KESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 328 ~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
.+++++++++++++ +|.|+| +++.+|++.+|++||++|+++ ..+++|++++|||+||+|||+++++|.
T Consensus 292 ~~~l~~~~~~~~l~~~v~~~g-~~~~~~~~~~~~~adv~v~ps---~~e~~~~~~~Eama~G~PvI~~~~~~~ 360 (438)
T 3c48_A 292 PDTYRHMAEELGVEKRIRFLD-PRPPSELVAVYRAADIVAVPS---FNESFGLVAMEAQASGTPVIAARVGGL 360 (438)
T ss_dssp -CHHHHHHHHTTCTTTEEEEC-CCCHHHHHHHHHHCSEEEECC---SCCSSCHHHHHHHHTTCCEEEESCTTH
T ss_pred HHHHHHHHHHcCCCCcEEEcC-CCChHHHHHHHHhCCEEEECc---cccCCchHHHHHHHcCCCEEecCCCCh
Confidence 99999999999998 999997 999999999999999999864 347899999999999999999998753
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-34 Score=278.45 Aligned_cols=303 Identities=13% Similarity=0.058 Sum_probs=222.7
Q ss_pred CCCCCEEEEEEeCCCCCChHHHHHHHHHHhh-CCCcEEEEecCCCCCC-cccccCCCeEEEEeecCCCCCCCCCCchHHH
Q 015058 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPH-AAILEHPSIHIHTMTQWPTIPRGLPKVLKPV 78 (414)
Q Consensus 1 ~~~~~~~~v~~~~d~~~~~r~~~~a~~La~~-~g~eV~vv~~~~~~~~-~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~ 78 (414)
|+++.+++++.-.-.+..+|+...+..+++. .||+|+|++....... .......++++++++. ... . ..+...
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~-~~~~~~ 75 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQDPESIVVFASTQNAEEAHAYDKTLDYEVIRWPR--SVM--L-PTPTTA 75 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTSCGGGEEEEEECSSHHHHHHHHTTCSSEEEEESS--SSC--C-SCHHHH
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHhcCCeEEEEECCCCccchhhhccccceEEEEccc--ccc--c-cchhhH
Confidence 6777777666654344568888888888886 5999999998764321 2233467899999883 211 1 122222
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCe-EEEEEcCcchhhhhhccCCCcHHHHHHH
Q 015058 79 LLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSA-FIVDWHNFGYTLLSLSLGRRSHFVSIYR 157 (414)
Q Consensus 79 ~~l~k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~-~Iv~~H~~~~~l~~~~~~~~~~~~~i~~ 157 (414)
..+.+.+ +..+||+||++.+. +...++.+++ ..++| +|+++|+.... +. . ....+
T Consensus 76 ~~l~~~~------------~~~~~Dvv~~~~~~--~~~~~~~~~~-~~~~~~~i~~~h~~~~~-----~~-~---~~~~~ 131 (394)
T 3okp_A 76 HAMAEII------------REREIDNVWFGAAA--PLALMAGTAK-QAGASKVIASTHGHEVG-----WS-M---LPGSR 131 (394)
T ss_dssp HHHHHHH------------HHTTCSEEEESSCT--TGGGGHHHHH-HTTCSEEEEECCSTHHH-----HT-T---SHHHH
T ss_pred HHHHHHH------------HhcCCCEEEECCcc--hHHHHHHHHH-hcCCCcEEEEeccchhh-----hh-h---cchhh
Confidence 2222222 23799999999763 2233344444 45665 78899987431 11 1 12345
Q ss_pred HHHHHHhccCCEEEEeCHHHHHHHHHhhCC--cEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCC
Q 015058 158 WIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGME 234 (414)
Q Consensus 158 ~~Ek~~~k~ad~ii~vS~~~~~~l~~~~gi--~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 234 (414)
++++.+.+.+|.++|+|+.+++.+.+.++. ++.+|||+ |.+.|.|.....+.+++++++
T Consensus 132 ~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~------------------ 193 (394)
T 3okp_A 132 QSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLG------------------ 193 (394)
T ss_dssp HHHHHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTT------------------
T ss_pred HHHHHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcCCCCchhhHHHHHhcC------------------
Confidence 566778899999999999999999988776 38999999 888888866556667776643
Q ss_pred CCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCC
Q 015058 235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY 314 (414)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (414)
+++++ .+++++||+.+.||++.+++|++.+.++ .
T Consensus 194 ------------------~~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~~---------------------------~ 227 (394)
T 3okp_A 194 ------------------FTDTT-PVIACNSRLVPRKGQDSLIKAMPQVIAA---------------------------R 227 (394)
T ss_dssp ------------------CCTTC-CEEEEESCSCGGGCHHHHHHHHHHHHHH---------------------------S
T ss_pred ------------------CCcCc-eEEEEEeccccccCHHHHHHHHHHHHhh---------------------------C
Confidence 44454 4899999999999999999999999863 6
Q ss_pred CcEEEEEEcCCCChHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCC----CCCCCchhHHHHHHcCC
Q 015058 315 PRLLFIITGKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS----SGLDLPMKVCYCWYSRY 389 (414)
Q Consensus 315 p~i~liI~G~G~~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~----~g~~lP~kl~Eama~G~ 389 (414)
|+++|+|+|+|++++.+++++ .++. +|.|+| +++++|+..+|++||++|+++... ..+++|++++|||++|+
T Consensus 228 ~~~~l~i~G~g~~~~~l~~~~--~~~~~~v~~~g-~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~ 304 (394)
T 3okp_A 228 PDAQLLIVGSGRYESTLRRLA--TDVSQNVKFLG-RLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGV 304 (394)
T ss_dssp TTCEEEEECCCTTHHHHHHHT--GGGGGGEEEEE-SCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTC
T ss_pred CCeEEEEEcCchHHHHHHHHH--hcccCeEEEcC-CCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCC
Confidence 789999999999999999988 6776 999998 999999999999999999874321 11789999999999999
Q ss_pred eEEEeeeCCc
Q 015058 390 SLKLLWTCSV 399 (414)
Q Consensus 390 Pvi~s~~~~~ 399 (414)
|||+++++|.
T Consensus 305 PvI~~~~~~~ 314 (394)
T 3okp_A 305 PVIAGTSGGA 314 (394)
T ss_dssp CEEECSSTTG
T ss_pred CEEEeCCCCh
Confidence 9999998765
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-32 Score=280.57 Aligned_cols=302 Identities=13% Similarity=0.037 Sum_probs=208.9
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCC-cc----ccc---CCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 015058 22 QYQALSLARQMSLEVDVVAYGGSKPH-AA----ILE---HPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLW 93 (414)
Q Consensus 22 ~~~a~~La~~~g~eV~vv~~~~~~~~-~~----~~~---~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~ 93 (414)
...+..|+++ ||+|+|+|....... .. ... .+++++++++. .......+. ..+..+...... ++
T Consensus 40 ~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~--~~~~~~~~~-~~~~~~~~~~~~----l~ 111 (499)
T 2r60_A 40 KEVSLALAEM-GVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRIPF--GGDKFLPKE-ELWPYLHEYVNK----II 111 (499)
T ss_dssp HHHHHHHHHT-TCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEECC--SCSSCCCGG-GCGGGHHHHHHH----HH
T ss_pred HHHHHHHHhc-CCeEEEEeCCCCcccccchhhhHHhccCCCCeEEEEecC--CCcCCcCHH-HHHHHHHHHHHH----HH
Confidence 3455666675 999999997653211 11 111 47899999983 221111110 111111111111 12
Q ss_pred HHhhhc-CCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCC----cHHHH-----HHHHHHHHH
Q 015058 94 FLCVKI-ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRR----SHFVS-----IYRWIEKYY 163 (414)
Q Consensus 94 ~l~~k~-~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~----~~~~~-----i~~~~Ek~~ 163 (414)
.++++. .+||+||+|++ ...+++.++++..++|+|+++|+....... ..... ..+.+ ...++|+.+
T Consensus 112 ~~l~~~~~~~Divh~~~~---~~~~~~~~~~~~~~~p~v~~~H~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (499)
T 2r60_A 112 NFYREEGKFPQVVTTHYG---DGGLAGVLLKNIKGLPFTFTGHSLGAQKME-KLNVNTSNFKEMDERFKFHRRIIAERLT 187 (499)
T ss_dssp HHHHHHTCCCSEEEEEHH---HHHHHHHHHHHHHCCCEEEECSSCHHHHHH-TTCCCSTTSHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHhcCCCCCEEEEcCC---cchHHHHHHHHhcCCcEEEEccCcccccch-hhccCCCCcchhhhhHHHHHHHHHHHHH
Confidence 222222 58999999975 445566667777899999999997432111 11110 11111 334578889
Q ss_pred hccCCEEEEeCHHHHHHHHHh--hC-C-------cEEEecCC-CCCCcCCCCh-HHHHHHHHHhhhhccCCCCccccccC
Q 015058 164 GKMANGCLCVTQAMQHELAQN--WG-I-------KATVLYDQ-PPEFFHPTSL-EEKHELFCRLNKILHQPLGVQDCVSN 231 (414)
Q Consensus 164 ~k~ad~ii~vS~~~~~~l~~~--~g-i-------~i~vI~n~-~~~~f~p~~~-~~~~~l~~~l~~~~~~~~~~~~~~~~ 231 (414)
.+.||.++|+|+.+++.+.+. +| + ++.+|||+ |.+.|.|... +.+.+++++++...
T Consensus 188 ~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~r~~~~~~~------------ 255 (499)
T 2r60_A 188 MSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDL------------ 255 (499)
T ss_dssp HHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTTSSSCCCHHHHHHHHHHHHHHS------------
T ss_pred HhcCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECCCcChhhcCccchhhhHHHHHHHhcccc------------
Confidence 999999999999999998877 77 4 38999999 8788877642 23456666654000
Q ss_pred CCCCCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCcc
Q 015058 232 GMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQ 311 (414)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (414)
..++++++ +|+++||+.++||++.|++|++.+.++
T Consensus 256 -------------------~~~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~~------------------------- 290 (499)
T 2r60_A 256 -------------------GSERMELP-AIIASSRLDQKKNHYGLVEAYVQNKEL------------------------- 290 (499)
T ss_dssp -------------------CGGGTTSC-EEEECSCCCGGGCHHHHHHHHHTCHHH-------------------------
T ss_pred -------------------cccCCCCc-EEEEeecCccccCHHHHHHHHHHHHHh-------------------------
Confidence 00233454 899999999999999999999998763
Q ss_pred CCCC-cEEEEEEcC--CC------C-------hHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhc----cEEEeecc
Q 015058 312 YLYP-RLLFIITGK--GP------D-------KESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSA----DLGVCLHT 370 (414)
Q Consensus 312 ~~~p-~i~liI~G~--G~------~-------~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~a----Dl~V~~~~ 370 (414)
+| .++|+|+|+ |+ . .++++++++++|++ +|+|+| +++++|++.+|++| |++|+|+.
T Consensus 291 --~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G-~v~~~~~~~~~~~a~~~~dv~v~pS~ 367 (499)
T 2r60_A 291 --QDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFP-LNSQQELAGCYAYLASKGSVFALTSF 367 (499)
T ss_dssp --HHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEE-CCSHHHHHHHHHHHHHTTCEEEECCS
T ss_pred --CCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECC-CCCHHHHHHHHHhcCcCCCEEEECcc
Confidence 23 368999998 55 1 78999999999998 899998 99999999999999 99998743
Q ss_pred CCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 371 SSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 371 s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
.+++|++++||||||+|||+++++|
T Consensus 368 ---~Eg~~~~~lEAma~G~PvI~s~~~g 392 (499)
T 2r60_A 368 ---YEPFGLAPVEAMASGLPAVVTRNGG 392 (499)
T ss_dssp ---CBCCCSHHHHHHHTTCCEEEESSBH
T ss_pred ---cCCCCcHHHHHHHcCCCEEEecCCC
Confidence 4789999999999999999999865
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-31 Score=265.15 Aligned_cols=280 Identities=12% Similarity=0.116 Sum_probs=198.4
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 015058 22 QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIAS 101 (414)
Q Consensus 22 ~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k~~~ 101 (414)
...+..|+++ ||+|+|+|....... ....+++.++.++...... .......+. .... ++.++ +..+
T Consensus 34 ~~la~~L~~~-G~~V~v~~~~~~~~~--~~~~~~i~~~~~~~~~~~~--~~~~~~~~~----~~~~----l~~~l-~~~~ 99 (394)
T 2jjm_A 34 TELGKQLAER-GHEIHFITSGLPFRL--NKVYPNIYFHEVTVNQYSV--FQYPPYDLA----LASK----MAEVA-QREN 99 (394)
T ss_dssp HHHHHHHHHT-TCEEEEECSSCC------CCCTTEEEECCCCC------CCSCCHHHH----HHHH----HHHHH-HHHT
T ss_pred HHHHHHHHhC-CCEEEEEeCCCCCcc--cccCCceEEEecccccccc--cccccccHH----HHHH----HHHHH-HHcC
Confidence 3455667775 999999997643211 1235688887776211110 111111111 1111 11112 2369
Q ss_pred CcEEEEeCCCCchHHHHHHHHHhhc--CCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHH
Q 015058 102 PDVFLVQNPPSVPTLVAVKWASSLR--RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (414)
Q Consensus 102 ~Dvvh~~~pp~~~~~~~~~la~~~~--~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~ 179 (414)
||+||+|++. +..+.+.+++++. ++|+|+++|+..... .+... .+++++++..+.||.++|+|+.+++
T Consensus 100 ~Dvv~~~~~~--~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~----~~~~~----~~~~~~~~~~~~ad~ii~~s~~~~~ 169 (394)
T 2jjm_A 100 LDILHVHYAI--PHAICAYLAKQMIGERIKIVTTLHGTDITV----LGSDP----SLNNLIRFGIEQSDVVTAVSHSLIN 169 (394)
T ss_dssp CSEEEECSST--THHHHHHHHHHHTTTCSEEEEECCHHHHHT----TTTCT----TTHHHHHHHHHHSSEEEESCHHHHH
T ss_pred CCEEEEcchh--HHHHHHHHHHHhhcCCCCEEEEEecCcccc----cCCCH----HHHHHHHHHHhhCCEEEECCHHHHH
Confidence 9999999762 3344455555554 599999999964321 11122 2234567778999999999999999
Q ss_pred HHHHhhCC--cEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCC
Q 015058 180 ELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN 256 (414)
Q Consensus 180 ~l~~~~gi--~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 256 (414)
.+.+.++. ++.+|||+ |++.|.|.+. .+++++++ ++++
T Consensus 170 ~~~~~~~~~~~~~vi~ngv~~~~~~~~~~---~~~~~~~~------------------------------------~~~~ 210 (394)
T 2jjm_A 170 ETHELVKPNKDIQTVYNFIDERVYFKRDM---TQLKKEYG------------------------------------ISES 210 (394)
T ss_dssp HHHHHTCCSSCEEECCCCCCTTTCCCCCC---HHHHHHTT------------------------------------CC--
T ss_pred HHHHhhCCcccEEEecCCccHHhcCCcch---HHHHHHcC------------------------------------CCCC
Confidence 99988765 48999999 7777876532 34454432 3344
Q ss_pred CCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHH
Q 015058 257 RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIR 336 (414)
Q Consensus 257 ~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~ 336 (414)
+ .+++++||+.++||++.+++|++.+.+ . ++++|+|+|+|++.+++++.++
T Consensus 211 ~-~~i~~~G~~~~~Kg~~~li~a~~~l~~---------------------------~-~~~~l~i~G~g~~~~~l~~~~~ 261 (394)
T 2jjm_A 211 E-KILIHISNFRKVKRVQDVVQAFAKIVT---------------------------E-VDAKLLLVGDGPEFCTILQLVK 261 (394)
T ss_dssp --CEEEEECCCCGGGTHHHHHHHHHHHHH---------------------------S-SCCEEEEECCCTTHHHHHHHHH
T ss_pred C-eEEEEeeccccccCHHHHHHHHHHHHh---------------------------h-CCCEEEEECCchHHHHHHHHHH
Confidence 4 489999999999999999999999875 2 4689999999999999999999
Q ss_pred HcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 337 RLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 337 ~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
++++. +|.|.| +.+|++.+|++||++|+|+. .+++|++++|||+||+|||+++++|.
T Consensus 262 ~~~l~~~v~~~g---~~~~~~~~~~~adv~v~ps~---~e~~~~~~~EAma~G~PvI~~~~~~~ 319 (394)
T 2jjm_A 262 NLHIEDRVLFLG---KQDNVAELLAMSDLMLLLSE---KESFGLVLLEAMACGVPCIGTRVGGI 319 (394)
T ss_dssp TTTCGGGBCCCB---SCSCTHHHHHTCSEEEECCS---CCSCCHHHHHHHHTTCCEEEECCTTS
T ss_pred HcCCCCeEEEeC---chhhHHHHHHhCCEEEeccc---cCCCchHHHHHHhcCCCEEEecCCCh
Confidence 99997 999998 68999999999999998643 57899999999999999999998753
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=265.95 Aligned_cols=225 Identities=12% Similarity=0.074 Sum_probs=166.7
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhh--cCCeEEEEEcCcchhh-h---hhc-cCCC-cHH----HHH--HHHHHHHHh
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTL-L---SLS-LGRR-SHF----VSI--YRWIEKYYG 164 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~--~~~~~Iv~~H~~~~~l-~---~~~-~~~~-~~~----~~i--~~~~Ek~~~ 164 (414)
..+|||||+|++ .+.+++.++++. .++|+|+++|+..+.- . .+. .+.. ..+ ... ..++++...
T Consensus 128 ~~~~DiIh~~~~---~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (485)
T 1rzu_A 128 GWRPDMVHAHDW---QAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGL 204 (485)
T ss_dssp SCCCSEEEEEHH---HHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHH
T ss_pred CCCCCEEEeccc---chhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHH
Confidence 478999999985 334445555554 7899999999963210 0 000 0000 000 000 124567788
Q ss_pred ccCCEEEEeCHHHHHHHHHh-hC-----------CcEEEecCC-CCCCcCCCChH----------------HHHHHHHHh
Q 015058 165 KMANGCLCVTQAMQHELAQN-WG-----------IKATVLYDQ-PPEFFHPTSLE----------------EKHELFCRL 215 (414)
Q Consensus 165 k~ad~ii~vS~~~~~~l~~~-~g-----------i~i~vI~n~-~~~~f~p~~~~----------------~~~~l~~~l 215 (414)
+.||.++|+|+.+++.+.+. +| .++.+|||+ |.+.|.|.... .+.++++++
T Consensus 205 ~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 284 (485)
T 1rzu_A 205 QTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHF 284 (485)
T ss_dssp HHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHH
T ss_pred hhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhc
Confidence 99999999999999988764 34 238999999 87888775321 245566554
Q ss_pred hhhccCCCCccccccCCCCCCCCccceeeeccccccccCCC-CCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccC
Q 015058 216 NKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN-RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 294 (414)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~ 294 (414)
+ ++++ ++ +|+++||+.++||++.|++|++.+.+
T Consensus 285 ~------------------------------------~~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~--------- 318 (485)
T 1rzu_A 285 R------------------------------------IDDDGSP-LFCVISRLTWQKGIDLMAEAVDEIVS--------- 318 (485)
T ss_dssp T------------------------------------CCCSSSC-EEEEESCBSTTTTHHHHHTTHHHHHH---------
T ss_pred C------------------------------------CCCCCCe-EEEEEccCccccCHHHHHHHHHHHHh---------
Confidence 3 4443 44 89999999999999999999999874
Q ss_pred CCchhhhhhhhhcCCccCCCCcEEEEEEcCCC--ChHHHHHHHHHcCCCcEE-EecCCCChhhHHHHHhhccEEEeeccC
Q 015058 295 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVA-FRTMWLSAEDYPLLLGSADLGVCLHTS 371 (414)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~--~~e~l~~~i~~l~l~~V~-f~g~~v~~ed~~~~l~~aDl~V~~~~s 371 (414)
++++|+|+|+|+ .++.+++++++++ .+|. |.| + +.++++.+|++||++|+|+.
T Consensus 319 --------------------~~~~l~ivG~g~~~~~~~l~~~~~~~~-~~v~~~~g-~-~~~~~~~~~~~adv~v~pS~- 374 (485)
T 1rzu_A 319 --------------------LGGRLVVLGAGDVALEGALLAAASRHH-GRVGVAIG-Y-NEPLSHLMQAGCDAIIIPSR- 374 (485)
T ss_dssp --------------------TTCEEEEEECBCHHHHHHHHHHHHHTT-TTEEEEES-C-CHHHHHHHHHHCSEEEECCS-
T ss_pred --------------------cCceEEEEeCCchHHHHHHHHHHHhCC-CcEEEecC-C-CHHHHHHHHhcCCEEEECcc-
Confidence 379999999997 4788999999986 6888 665 6 77888999999999998743
Q ss_pred CCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 372 SSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 372 ~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
.+++|++++||||||+|||+++++|
T Consensus 375 --~E~~~~~~lEAma~G~PvI~s~~gg 399 (485)
T 1rzu_A 375 --FEPCGLTQLYALRYGCIPVVARTGG 399 (485)
T ss_dssp --CCSSCSHHHHHHHHTCEEEEESSHH
T ss_pred --cCCCCHHHHHHHHCCCCEEEeCCCC
Confidence 5789999999999999999999855
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=261.45 Aligned_cols=278 Identities=12% Similarity=0.051 Sum_probs=193.2
Q ss_pred HHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcC
Q 015058 21 MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIA 100 (414)
Q Consensus 21 ~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k~~ 100 (414)
+...+..|+++ ||+|+|+|...... ...++++++++ ... .. .. ....+.... +..++ +..
T Consensus 20 ~~~l~~~L~~~-G~~V~v~~~~~~~~-----~~~~~~v~~~~--~~~---~~-~~---~~~~~~~~~----l~~~i-~~~ 79 (374)
T 2iw1_A 20 FMRIASTVAAR-GHHVRVYTQSWEGD-----CPKAFELIQVP--VKS---HT-NH---GRNAEYYAW----VQNHL-KEH 79 (374)
T ss_dssp HHHHHHHHHHT-TCCEEEEESEECSC-----CCTTCEEEECC--CCC---SS-HH---HHHHHHHHH----HHHHH-HHS
T ss_pred HHHHHHHHHhC-CCeEEEEecCCCCC-----CCCCcEEEEEc--cCc---cc-ch---hhHHHHHHH----HHHHH-hcc
Confidence 44566777775 99999999764221 12478888887 221 11 11 111111111 11222 347
Q ss_pred CCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhc--cCCEEEEeCHHHH
Q 015058 101 SPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK--MANGCLCVTQAMQ 178 (414)
Q Consensus 101 ~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k--~ad~ii~vS~~~~ 178 (414)
+||+||++++... ..+.++....+++.+.+.|+.... .....+.+.++|+..++ .+|.++++|+.++
T Consensus 80 ~~Dvv~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~ 148 (374)
T 2iw1_A 80 PADRVVGFNKMPG---LDVYFAADVCYAEKVAQEKGFLYR--------LTSRYRHYAAFERATFEQGKSTKLMMLTDKQI 148 (374)
T ss_dssp CCSEEEESSCCTT---CSEEECCSCCHHHHHHHHCCHHHH--------TSHHHHHHHHHHHHHHSTTCCCEEEESCHHHH
T ss_pred CCCEEEEecCCCC---ceeeeccccccceeeeecccchhh--------hcHHHHHHHHHHHHHhhccCCcEEEEcCHHHH
Confidence 9999999975211 111111122223333334443211 11223455677777765 6999999999999
Q ss_pred HHHHHhhCCc---EEEecCC-CCCCcCCCCh-HHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeecccccccc
Q 015058 179 HELAQNWGIK---ATVLYDQ-PPEFFHPTSL-EEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL 253 (414)
Q Consensus 179 ~~l~~~~gi~---i~vI~n~-~~~~f~p~~~-~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 253 (414)
+.+.+.+|.+ +.++||+ |.+.|.|... ..+.+++++++ +
T Consensus 149 ~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~------------------------------------~ 192 (374)
T 2iw1_A 149 ADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNG------------------------------------I 192 (374)
T ss_dssp HHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTT------------------------------------C
T ss_pred HHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHHHHHHhC------------------------------------C
Confidence 9999888864 8999999 7777766432 23455665543 4
Q ss_pred CCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHH
Q 015058 254 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (414)
Q Consensus 254 ~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~ 333 (414)
++++ .+++++||+.++||++.+++|++.+.++. .++++|+|+|+|+. +++++
T Consensus 193 ~~~~-~~i~~~G~~~~~K~~~~li~a~~~l~~~~--------------------------~~~~~l~i~G~g~~-~~~~~ 244 (374)
T 2iw1_A 193 KEQQ-NLLLQVGSDFGRKGVDRSIEALASLPESL--------------------------RHNTLLFVVGQDKP-RKFEA 244 (374)
T ss_dssp CTTC-EEEEEECSCTTTTTHHHHHHHHHTSCHHH--------------------------HHTEEEEEESSSCC-HHHHH
T ss_pred CCCC-eEEEEeccchhhcCHHHHHHHHHHhHhcc--------------------------CCceEEEEEcCCCH-HHHHH
Confidence 4444 58999999999999999999999987531 25799999999985 78999
Q ss_pred HHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 334 KIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 334 ~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
+++++++. +|+|+| +.+|++.+|++||++|+|+ ..+++|++++|||+||+|||+++++|.
T Consensus 245 ~~~~~~~~~~v~~~g---~~~~~~~~~~~ad~~v~ps---~~e~~~~~~~Ea~a~G~Pvi~~~~~~~ 305 (374)
T 2iw1_A 245 LAEKLGVRSNVHFFS---GRNDVSELMAAADLLLHPA---YQEAAGIVLLEAITAGLPVLTTAVCGY 305 (374)
T ss_dssp HHHHHTCGGGEEEES---CCSCHHHHHHHCSEEEECC---SCCSSCHHHHHHHHHTCCEEEETTSTT
T ss_pred HHHHcCCCCcEEECC---CcccHHHHHHhcCEEEecc---ccCCcccHHHHHHHCCCCEEEecCCCc
Confidence 99999997 999998 5789999999999999864 357899999999999999999998774
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-30 Score=263.98 Aligned_cols=224 Identities=15% Similarity=0.091 Sum_probs=166.6
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHH-hhcCCeEEEEEcCcchhh-hh---hc-cCCC-cHH------HHHHHHHHHHHhcc
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTL-LS---LS-LGRR-SHF------VSIYRWIEKYYGKM 166 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~-~~~~~~~Iv~~H~~~~~l-~~---~~-~~~~-~~~------~~i~~~~Ek~~~k~ 166 (414)
.+|||||+|++ ...+++.+++ +..++|+|+++|+..+.. .. +. .+.. ..+ .....++++...+.
T Consensus 128 ~~~Divh~~~~---~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (485)
T 2qzs_A 128 WRPDVVHAHDW---HAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYY 204 (485)
T ss_dssp CCCSEEEEETG---GGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHH
T ss_pred CCCCEEEeecc---chhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHh
Confidence 68999999986 3333444555 667999999999963210 00 00 0000 000 00012456777899
Q ss_pred CCEEEEeCHHHHHHHHHh-hC-------------CcEEEecCC-CCCCcCCCChH----------------HHHHHHHHh
Q 015058 167 ANGCLCVTQAMQHELAQN-WG-------------IKATVLYDQ-PPEFFHPTSLE----------------EKHELFCRL 215 (414)
Q Consensus 167 ad~ii~vS~~~~~~l~~~-~g-------------i~i~vI~n~-~~~~f~p~~~~----------------~~~~l~~~l 215 (414)
||.++|+|+.+++.+.+. +| .++.+|||+ |.+.|.|.... .+.++++++
T Consensus 205 ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 284 (485)
T 2qzs_A 205 ADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAM 284 (485)
T ss_dssp CSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHH
T ss_pred cCeEEecCHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHc
Confidence 999999999999988754 44 458999999 77888775321 245566554
Q ss_pred hhhccCCCCccccccCCCCCCCCccceeeeccccccccCC--CCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhcc
Q 015058 216 NKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP--NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE 293 (414)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~ 293 (414)
+ +++ ++ .+++++||+.++||++.|++|++.+.+
T Consensus 285 ~------------------------------------~~~~~~~-~~i~~vGrl~~~Kg~~~li~a~~~l~~-------- 319 (485)
T 2qzs_A 285 G------------------------------------LKVDDKV-PLFAVVSRLTSQKGLDLVLEALPGLLE-------- 319 (485)
T ss_dssp T------------------------------------CCCCTTS-CEEEEEEEESGGGCHHHHHHHHHHHHH--------
T ss_pred C------------------------------------CCCCCCC-eEEEEeccCccccCHHHHHHHHHHHhh--------
Confidence 3 333 44 489999999999999999999999874
Q ss_pred CCCchhhhhhhhhcCCccCCCCcEEEEEEcCCC--ChHHHHHHHHHcCCCcEE-EecCCCChhhHHHHHhhccEEEeecc
Q 015058 294 DDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVA-FRTMWLSAEDYPLLLGSADLGVCLHT 370 (414)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~--~~e~l~~~i~~l~l~~V~-f~g~~v~~ed~~~~l~~aDl~V~~~~ 370 (414)
++++|+|+|+|+ .++.+++++++++ .+|. |.| + +.++++.+|++||++|+|+.
T Consensus 320 ---------------------~~~~l~ivG~g~~~~~~~l~~~~~~~~-~~v~~~~g-~-~~~~~~~~~~~adv~v~pS~ 375 (485)
T 2qzs_A 320 ---------------------QGGQLALLGAGDPVLQEGFLAAAAEYP-GQVGVQIG-Y-HEAFSHRIMGGADVILVPSR 375 (485)
T ss_dssp ---------------------TTCEEEEEEEECHHHHHHHHHHHHHST-TTEEEEES-C-CHHHHHHHHHHCSEEEECCS
T ss_pred ---------------------CCcEEEEEeCCchHHHHHHHHHHHhCC-CcEEEeCC-C-CHHHHHHHHHhCCEEEECCc
Confidence 379999999997 5788999999987 6887 665 6 77888999999999998743
Q ss_pred CCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 371 SSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 371 s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
.+++|++++||||||+|||+++++|
T Consensus 376 ---~E~~g~~~lEAma~G~PvI~s~~gg 400 (485)
T 2qzs_A 376 ---FEPCGLTQLYGLKYGTLPLVRRTGG 400 (485)
T ss_dssp ---CCSSCSHHHHHHHHTCEEEEESSHH
T ss_pred ---cCCCcHHHHHHHHCCCCEEECCCCC
Confidence 5789999999999999999998754
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-30 Score=255.74 Aligned_cols=274 Identities=12% Similarity=0.089 Sum_probs=187.3
Q ss_pred HHHHHHHHHHhhCCCcEEEEecCCCCC-CcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhh
Q 015058 20 RMQYQALSLARQMSLEVDVVAYGGSKP-HAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVK 98 (414)
Q Consensus 20 r~~~~a~~La~~~g~eV~vv~~~~~~~-~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k 98 (414)
.+...+..|+++ ||+|++++...... ........+ ++++++ .... ..+.. ........ +..++ +
T Consensus 40 ~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~--~~~~~----~~~~~~~~----l~~~l-~ 104 (406)
T 2gek_A 40 HVLQLAEVLRDA-GHEVSVLAPASPHVKLPDYVVSGG-KAVPIP--YNGS--VARLR----FGPATHRK----VKKWI-A 104 (406)
T ss_dssp HHHHHHHHHHHT-TCEEEEEESCCTTSCCCTTEEECC-CCC--------------------CCHHHHHH----HHHHH-H
T ss_pred HHHHHHHHHHHC-CCeEEEEecCCccccCCcccccCC-cEEecc--ccCC--ccccc----ccHHHHHH----HHHHH-H
Confidence 344567778775 99999999876432 111111122 444444 1100 00000 00001111 11112 2
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
..+||+||++.+.... .+.++++..++|+|+++|+... .......+.++++ ...+.+|.++|+|+.++
T Consensus 105 ~~~~Dii~~~~~~~~~---~~~~~~~~~~~~~i~~~h~~~~--------~~~~~~~~~~~~~-~~~~~~d~ii~~s~~~~ 172 (406)
T 2gek_A 105 EGDFDVLHIHEPNAPS---LSMLALQAAEGPIVATFHTSTT--------KSLTLSVFQGILR-PYHEKIIGRIAVSDLAR 172 (406)
T ss_dssp HHCCSEEEEECCCSSS---HHHHHHHHEESSEEEEECCCCC--------SHHHHHHHHSTTH-HHHTTCSEEEESSHHHH
T ss_pred hcCCCEEEECCccchH---HHHHHHHhcCCCEEEEEcCcch--------hhhhHHHHHHHHH-HHHhhCCEEEECCHHHH
Confidence 3699999999874332 2445556668999999999632 1112233344445 66789999999999999
Q ss_pred HHHHHhhCCc-EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCC
Q 015058 179 HELAQNWGIK-ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN 256 (414)
Q Consensus 179 ~~l~~~~gi~-i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 256 (414)
+.+.+.++.+ + +|||+ +.+.|.+.... ..++++
T Consensus 173 ~~~~~~~~~~~~-vi~~~v~~~~~~~~~~~--------------------------------------------~~~~~~ 207 (406)
T 2gek_A 173 RWQMEALGSDAV-EIPNGVDVASFADAPLL--------------------------------------------DGYPRE 207 (406)
T ss_dssp HHHHHHHSSCEE-ECCCCBCHHHHHTCCCC--------------------------------------------TTCSCS
T ss_pred HHHHHhcCCCcE-EecCCCChhhcCCCchh--------------------------------------------hhccCC
Confidence 9998877766 7 99999 54444333210 012334
Q ss_pred CCeEEEEeccC-CCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHH
Q 015058 257 RPALVVSSTSW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 335 (414)
Q Consensus 257 ~~~~i~~vgrl-~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i 335 (414)
+ ..++++|++ .+.||++.+++|+..+.+ .+|+++|+|+|+|+. +++++++
T Consensus 208 ~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~---------------------------~~~~~~l~i~G~~~~-~~l~~~~ 258 (406)
T 2gek_A 208 G-RTVLFLGRYDEPRKGMAVLLAALPKLVA---------------------------RFPDVEILIVGRGDE-DELREQA 258 (406)
T ss_dssp S-CEEEEESCTTSGGGCHHHHHHHHHHHHT---------------------------TSTTCEEEEESCSCH-HHHHHHT
T ss_pred C-eEEEEEeeeCccccCHHHHHHHHHHHHH---------------------------HCCCeEEEEEcCCcH-HHHHHHH
Confidence 4 389999999 999999999999999875 367899999999999 9999999
Q ss_pred HHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 336 RRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 336 ~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
+++ -.+|.|.| +++.+++..+|++||++|+++ ...+++|++++|||+||+|||+++++|
T Consensus 259 ~~~-~~~v~~~g-~~~~~~~~~~~~~adv~v~ps--~~~e~~~~~~~Ea~a~G~PvI~~~~~~ 317 (406)
T 2gek_A 259 GDL-AGHLRFLG-QVDDATKASAMRSADVYCAPH--LGGESFGIVLVEAMAAGTAVVASDLDA 317 (406)
T ss_dssp GGG-GGGEEECC-SCCHHHHHHHHHHSSEEEECC--CSCCSSCHHHHHHHHHTCEEEECCCHH
T ss_pred Hhc-cCcEEEEe-cCCHHHHHHHHHHCCEEEecC--CCCCCCchHHHHHHHcCCCEEEecCCc
Confidence 887 34999997 999999999999999999863 235789999999999999999999854
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=251.82 Aligned_cols=213 Identities=14% Similarity=0.194 Sum_probs=156.5
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEE-EEeCHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGC-LCVTQAM 177 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~i-i~vS~~~ 177 (414)
..+||+||+|++... .++.+++ .++|+|++.|+... . .. ....+++++++ +.+|.+ +++|+..
T Consensus 124 ~~~~Dvv~~~~~~~~---~~~~~~~--~~~p~v~~~h~~~~------~-~~---~~~~~~~~~~~-~~~~~~i~~~s~~~ 187 (416)
T 2x6q_A 124 LSSFDYVLVHDPQPA---ALIEFYE--KKSPWLWRCHIDLS------S-PN---REFWEFLRRFV-EKYDRYIFHLPEYV 187 (416)
T ss_dssp GGGSSEEEEESSTTG---GGGGGSC--CCSCEEEECCSCCS------S-CC---HHHHHHHHHHH-TTSSEEEESSGGGS
T ss_pred hcCCCEEEEeccchh---hHHHHHH--hcCCEEEEEccccC------C-cc---HHHHHHHHHHH-HhCCEEEEechHHH
Confidence 358999999987322 1222222 23899999998642 1 11 12334555555 455554 5777765
Q ss_pred HHHHHHhhCCcEEEecCC-CCCCcCC--CChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccC
Q 015058 178 QHELAQNWGIKATVLYDQ-PPEFFHP--TSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (414)
Q Consensus 178 ~~~l~~~~gi~i~vI~n~-~~~~f~p--~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 254 (414)
++.+. ..++.+|||+ |+..|.+ .+.+++.+++++++ ++
T Consensus 188 ~~~~~---~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~------------------------------------~~ 228 (416)
T 2x6q_A 188 QPELD---RNKAVIMPPSIDPLSEKNVELKQTEILRILERFD------------------------------------VD 228 (416)
T ss_dssp CTTSC---TTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTT------------------------------------CC
T ss_pred HhhCC---ccceEEeCCCCChhhhcccccChhhHHHHHHHhC------------------------------------CC
Confidence 54221 1358899999 7666643 23334556665543 44
Q ss_pred CCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCC-----hH
Q 015058 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-----KE 329 (414)
Q Consensus 255 ~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~-----~e 329 (414)
++++ +++++||+.++||++.|++|++.+.++ .|+++|+|+|+|+. ++
T Consensus 229 ~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~~---------------------------~~~~~l~i~G~g~~~~~~~~~ 280 (416)
T 2x6q_A 229 PEKP-IITQVSRFDPWKGIFDVIEIYRKVKEK---------------------------IPGVQLLLVGVMAHDDPEGWI 280 (416)
T ss_dssp TTSC-EEEEECCCCTTSCHHHHHHHHHHHHHH---------------------------CTTCEEEEEECCCTTCHHHHH
T ss_pred CCCc-EEEEEeccccccCHHHHHHHHHHHHHh---------------------------CCCeEEEEEecCcccchhHHH
Confidence 5554 899999999999999999999999863 67899999999986 56
Q ss_pred HHHHHHHHcCCC-cEEEecCCCC---hhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 330 SYEEKIRRLRLK-RVAFRTMWLS---AEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 330 ~l~~~i~~l~l~-~V~f~g~~v~---~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
.++++++++++. +|+|+| +++ +++++.+|++||++|+++. .+++|++++||||||+|||+++++|
T Consensus 281 ~l~~~~~~~~~~~~V~~~G-~~~~~~~~~~~~~~~~ad~~v~ps~---~E~~~~~~lEAma~G~PvI~~~~~g 349 (416)
T 2x6q_A 281 YFEKTLRKIGEDYDVKVLT-NLIGVHAREVNAFQRASDVILQMSI---REGFGLTVTEAMWKGKPVIGRAVGG 349 (416)
T ss_dssp HHHHHHHHHTTCTTEEEEE-GGGTCCHHHHHHHHHHCSEEEECCS---SCSSCHHHHHHHHTTCCEEEESCHH
T ss_pred HHHHHHHHhCCCCcEEEec-ccCCCCHHHHHHHHHhCCEEEECCC---cCCCccHHHHHHHcCCCEEEccCCC
Confidence 789999999997 999997 554 7899999999999997643 4789999999999999999999854
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-29 Score=276.02 Aligned_cols=306 Identities=8% Similarity=-0.019 Sum_probs=199.6
Q ss_pred HHHHHhhCCCcEE----EEecCCCCC--------CcccccCCCeEEEEeecCCCC---CCCCCCchHHHHHHHHHHHHHH
Q 015058 25 ALSLARQMSLEVD----VVAYGGSKP--------HAAILEHPSIHIHTMTQWPTI---PRGLPKVLKPVLLLLKPLIQFF 89 (414)
Q Consensus 25 a~~La~~~g~eV~----vv~~~~~~~--------~~~~~~~~~i~i~~v~~~~~~---~~~~~~~~~~~~~l~k~l~~~~ 89 (414)
++.|+++ ||+|+ |+|.....+ ...+...++++|+++|-.+.. .+..++. ..+.++..+...
T Consensus 320 a~~L~~~-G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~-~L~~~L~~F~~~-- 395 (816)
T 3s28_A 320 LQRIKQQ-GLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRF-EVWPYLETYTED-- 395 (816)
T ss_dssp HHHHHHT-TCCCCCEEEEEEECCTTCTTSSTTSSEEECTTCSSEEEEEECEEETTEEECSCCCTT-TCGGGHHHHHHH--
T ss_pred HHHHHHC-CCccceeeEEEeCCCCCCCCCccCCcceeecCcCCeEEEEecCCCccccccccccHH-HHHHHHHHHHHH--
Confidence 3456665 99876 898764321 011112369999999832210 0111111 111111111111
Q ss_pred HHHHHHhh-hcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCc--HH---HHHHH--HHHH
Q 015058 90 MLLWFLCV-KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRS--HF---VSIYR--WIEK 161 (414)
Q Consensus 90 ~l~~~l~~-k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~--~~---~~i~~--~~Ek 161 (414)
.+..++. ...+|||||+|.+ .+++++.++++..|+|+|++.|+....... ..... .+ .++.. ..|+
T Consensus 396 -~l~~il~~~~~~PDVIHsH~~---~sglva~llar~~gvP~V~T~Hsl~~~k~~--~~~~~~~~~~~~y~~~~r~~aE~ 469 (816)
T 3s28_A 396 -AAVELSKELNGKPDLIIGNYS---DGNLVASLLAHKLGVTQCTIAHALEKTKYP--DSDIYWKKLDDKYHFSCQFTADI 469 (816)
T ss_dssp -HHHHHHHHCSSCCSEEEEEHH---HHHHHHHHHHHHHTCCEEEECSCCHHHHST--TTTTTHHHHHHHHCHHHHHHHHH
T ss_pred -HHHHHHHhcCCCCeEEEeCCc---hHHHHHHHHHHHcCCCEEEEEecccccccc--cccchhhhHHHHHHHHHHHHHHH
Confidence 1111222 2358999999975 566677788888899999999998532110 00100 11 11112 2378
Q ss_pred HHhccCCEEEEeCHHHHHHHHHh---hCC---------------------cEEEecCC-CCCCcCCCChHHH------HH
Q 015058 162 YYGKMANGCLCVTQAMQHELAQN---WGI---------------------KATVLYDQ-PPEFFHPTSLEEK------HE 210 (414)
Q Consensus 162 ~~~k~ad~ii~vS~~~~~~l~~~---~gi---------------------~i~vI~n~-~~~~f~p~~~~~~------~~ 210 (414)
...+.||.|||+|+..++.+.+. |+. ++.+|||| |.+.|.|.+...+ ..
T Consensus 470 ~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~ 549 (816)
T 3s28_A 470 FAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSE 549 (816)
T ss_dssp HHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHH
T ss_pred HHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhcccc
Confidence 89999999999999998853221 111 68999999 8888988652211 11
Q ss_pred HHHHhhhhccCCCCccccccCCCCCCCCccceeeecccccccc--CCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHh
Q 015058 211 LFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL--KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVA 288 (414)
Q Consensus 211 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~ 288 (414)
+...+. . | ... ...+++ +++++ +|+++||+.++||++.|++|+..+.++
T Consensus 550 i~~~l~-~---p--------------~~~--------r~~lg~l~~~~~~-vIl~vGRl~~~KGid~LIeA~~~L~~~-- 600 (816)
T 3s28_A 550 IEELLY-S---D--------------VEN--------KEHLCVLKDKKKP-ILFTMARLDRVKNLSGLVEWYGKNTRL-- 600 (816)
T ss_dssp HHHHHH-C---S--------------CCB--------TTEESCBSCTTSC-EEEEECCCCTTTTHHHHHHHHHHCHHH--
T ss_pred cccccc-c---h--------------hhH--------HHHhcccCCCCCe-EEEEEccCcccCCHHHHHHHHHHHHhh--
Confidence 110000 0 0 000 111233 44554 999999999999999999999999763
Q ss_pred hhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCC-----------ChHHHHHHHHHcCCC-cEEEecCCC----Ch
Q 015058 289 AILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-----------DKESYEEKIRRLRLK-RVAFRTMWL----SA 352 (414)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~-----------~~e~l~~~i~~l~l~-~V~f~g~~v----~~ 352 (414)
.|+++|+|+|+|+ ..++++++++++++. +|.|+| ++ +.
T Consensus 601 -------------------------~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG-~~~~~v~~ 654 (816)
T 3s28_A 601 -------------------------RELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWIS-SQMDRVRN 654 (816)
T ss_dssp -------------------------HHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEEC-CCCCHHHH
T ss_pred -------------------------CCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEcc-CccccCCH
Confidence 4689999999999 678899999999998 999997 44 45
Q ss_pred hhHHHHHh-hccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 353 EDYPLLLG-SADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 353 ed~~~~l~-~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
+++..+|+ +||++|+|+ ..+++|++++||||||+|||+|+++|
T Consensus 655 ~eL~~~~~~aaDvfV~PS---~~EgfglvllEAMA~G~PVIasd~GG 698 (816)
T 3s28_A 655 GELYRYICDTKGAFVQPA---LYEAFGLTVVEAMTCGLPTFATCKGG 698 (816)
T ss_dssp HHHHHHHHHTTCEEEECC---SCBSSCHHHHHHHHTTCCEEEESSBT
T ss_pred HHHHHHHHhcCeEEEECC---CccCccHHHHHHHHcCCCEEEeCCCC
Confidence 88999998 689999874 35789999999999999999999876
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-28 Score=237.57 Aligned_cols=232 Identities=16% Similarity=0.055 Sum_probs=173.1
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 015058 22 QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIAS 101 (414)
Q Consensus 22 ~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k~~~ 101 (414)
...+..|+++ ||+|++++....... .+++++++.+ . . ..+.+.+ +..+
T Consensus 37 ~~l~~~L~~~-G~~v~v~~~~~~~~~-----~~~~~~~~~~----------~-~---~~l~~~l------------~~~~ 84 (342)
T 2iuy_A 37 ANLMDGLLEL-GHEVFLLGAPGSPAG-----RPGLTVVPAG----------E-P---EEIERWL------------RTAD 84 (342)
T ss_dssp HHHHHHHHHT-TCEEEEESCTTSCCC-----STTEEECSCC----------S-H---HHHHHHH------------HHCC
T ss_pred HHHHHHHHHc-CCeEEEEecCCCCCC-----CCcceeccCC----------c-H---HHHHHHH------------HhcC
Confidence 3456777775 999999997754321 2455543211 1 1 1111211 2379
Q ss_pred CcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHHHH
Q 015058 102 PDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181 (414)
Q Consensus 102 ~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~~l 181 (414)
||+||+|++... . ++++..++| |+++|+... . .. .+|.++|+|+.+++.+
T Consensus 85 ~Dvi~~~~~~~~---~---~~~~~~~~p-v~~~h~~~~------~-~~----------------~~d~ii~~S~~~~~~~ 134 (342)
T 2iuy_A 85 VDVVHDHSGGVI---G---PAGLPPGTA-FISSHHFTT------R-PV----------------NPVGCTYSSRAQRAHC 134 (342)
T ss_dssp CSEEEECSSSSS---C---STTCCTTCE-EEEEECSSS------B-CS----------------CCTTEEESCHHHHHHT
T ss_pred CCEEEECCchhh---H---HHHhhcCCC-EEEecCCCC------C-cc----------------cceEEEEcCHHHHHHH
Confidence 999999987322 1 114567899 999999742 1 11 1999999999999988
Q ss_pred HHhhCCcEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeE
Q 015058 182 AQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPAL 260 (414)
Q Consensus 182 ~~~~gi~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 260 (414)
.+ ..++.+|||+ |.+.|.|... .. ++++ .
T Consensus 135 ~~--~~~~~vi~ngvd~~~~~~~~~----------------------------------------------~~-~~~~-~ 164 (342)
T 2iuy_A 135 GG--GDDAPVIPIPVDPARYRSAAD----------------------------------------------QV-AKED-F 164 (342)
T ss_dssp TC--CTTSCBCCCCBCGGGSCCSTT----------------------------------------------CC-CCCS-C
T ss_pred hc--CCceEEEcCCCChhhcCcccc----------------------------------------------cC-CCCC-E
Confidence 65 4568999999 7666655421 01 1333 7
Q ss_pred EEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHHHcCC
Q 015058 261 VVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL 340 (414)
Q Consensus 261 i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~l~l 340 (414)
++++||+.++||++.+++|++.+ +++|+|+|+|++++.+++++++++
T Consensus 165 i~~vG~~~~~Kg~~~li~a~~~~--------------------------------~~~l~i~G~g~~~~~l~~~~~~~~- 211 (342)
T 2iuy_A 165 LLFMGRVSPHKGALEAAAFAHAC--------------------------------GRRLVLAGPAWEPEYFDEITRRYG- 211 (342)
T ss_dssp EEEESCCCGGGTHHHHHHHHHHH--------------------------------TCCEEEESCCCCHHHHHHHHHHHT-
T ss_pred EEEEeccccccCHHHHHHHHHhc--------------------------------CcEEEEEeCcccHHHHHHHHHHhC-
Confidence 89999999999999999998864 478999999999999999999988
Q ss_pred CcEEEecCCCChhhHHHHHhhccEEEeeccCC-------CCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-------SGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 341 ~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~-------~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
.+|+|+| ++++++++.+|++||++|+++.+. ..+++|++++|||+||+|||+++++|.
T Consensus 212 ~~v~~~g-~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~ 276 (342)
T 2iuy_A 212 STVEPIG-EVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCL 276 (342)
T ss_dssp TTEEECC-CCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTH
T ss_pred CCEEEec-cCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCCh
Confidence 8999997 999999999999999999875411 157899999999999999999998754
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.8e-27 Score=235.43 Aligned_cols=203 Identities=12% Similarity=0.127 Sum_probs=158.5
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhhcCC----eEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCC--EEEEe
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRS----AFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMAN--GCLCV 173 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~~~~----~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad--~ii~v 173 (414)
.+||+||+|++ .. .++.++.+..++ +++..+|.... . .... .+++.+.+| .++|+
T Consensus 80 ~~~Div~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~--------~~~~~~~~~~~~ii~~ 140 (413)
T 3oy2_A 80 HKPDIVMIYND---PI-VIGNYLLAMGKCSHRTKIVLYVDLVSK------N-IREN--------LWWIFSHPKVVGVMAM 140 (413)
T ss_dssp HCCSEEEEEEC---HH-HHHHHHHHGGGCCSCCEEEEEECCCSB------S-CCGG--------GGGGGGCTTEEEEEES
T ss_pred cCCCEEEEcch---HH-HHHHHHHHhccCCCCCceeeeccccch------h-hHHH--------HHHHHhccCCceEEEc
Confidence 69999999965 22 334444554444 45566776532 1 1111 256778988 99999
Q ss_pred CHHHHHHHHHhhCC--cEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccc
Q 015058 174 TQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGID 250 (414)
Q Consensus 174 S~~~~~~l~~~~gi--~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (414)
|+.+++.+.+ +|. ++.+|||+ |.+.| . +.+++++
T Consensus 141 S~~~~~~~~~-~~~~~~~~vi~ngvd~~~~--~------~~~~~~~---------------------------------- 177 (413)
T 3oy2_A 141 SKCWISDICN-YGCKVPINIVSHFVDTKTI--Y------DARKLVG---------------------------------- 177 (413)
T ss_dssp STHHHHHHHH-TTCCSCEEECCCCCCCCCC--T------THHHHTT----------------------------------
T ss_pred CHHHHHHHHH-cCCCCceEEeCCCCCHHHH--H------HHHHhcC----------------------------------
Confidence 9999999988 575 38999999 76666 1 1222322
Q ss_pred cccCC--CCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCCh
Q 015058 251 VFLKP--NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 328 (414)
Q Consensus 251 ~~l~~--~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~ 328 (414)
+++ ++ .+++++||+.++||++.|++|++.+.++ .|+++|+|+|+|+..
T Consensus 178 --~~~~~~~-~~il~vGr~~~~Kg~~~li~a~~~l~~~---------------------------~~~~~l~ivG~g~~~ 227 (413)
T 3oy2_A 178 --LSEYNDD-VLFLNMNRNTARKRLDIYVLAAARFISK---------------------------YPDAKVRFLCNSHHE 227 (413)
T ss_dssp --CGGGTTS-EEEECCSCSSGGGTHHHHHHHHHHHHHH---------------------------CTTCCEEEEEECCTT
T ss_pred --CCcccCc-eEEEEcCCCchhcCcHHHHHHHHHHHHh---------------------------CCCcEEEEEeCCccc
Confidence 222 34 5899999999999999999999998763 688999999999876
Q ss_pred ------HHHHHHHHHcCCC-c-------EEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe
Q 015058 329 ------ESYEEKIRRLRLK-R-------VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL 394 (414)
Q Consensus 329 ------e~l~~~i~~l~l~-~-------V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s 394 (414)
+.++++++++|++ + |.|.| ++++++++.+|++||++|+|+ ..+++|++++||||||+|||++
T Consensus 228 ~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g-~~~~~~~~~~~~~adv~v~pS---~~E~~~~~~lEAma~G~PvI~s 303 (413)
T 3oy2_A 228 SKFDLHSIALRELVASGVDNVFTHLNKIMINRT-VLTDERVDMMYNACDVIVNCS---SGEGFGLCSAEGAVLGKPLIIS 303 (413)
T ss_dssp CSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECS-CCCHHHHHHHHHHCSEEEECC---SCCSSCHHHHHHHTTTCCEEEE
T ss_pred chhhHHHHHHHHHHHcCcccccccccceeeccC-cCCHHHHHHHHHhCCEEEeCC---CcCCCCcHHHHHHHcCCCEEEc
Confidence 8999999999999 5 77776 999999999999999999863 3688999999999999999999
Q ss_pred eeCC
Q 015058 395 WTCS 398 (414)
Q Consensus 395 ~~~~ 398 (414)
+++|
T Consensus 304 ~~~g 307 (413)
T 3oy2_A 304 AVGG 307 (413)
T ss_dssp CCHH
T ss_pred CCCC
Confidence 9876
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=226.29 Aligned_cols=259 Identities=15% Similarity=0.080 Sum_probs=176.4
Q ss_pred HHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 015058 23 YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASP 102 (414)
Q Consensus 23 ~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k~~~~ 102 (414)
..+..|+++ ||+|+++|..... ........+++++.++ ....... .....+......+... ..+++++ +..+|
T Consensus 25 ~la~~L~~~-G~~V~v~~~~~~~-~~~~~~~~g~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~-~~l~~~l-~~~~p 97 (364)
T 1f0k_A 25 AVAHHLMAQ-GWQVRWLGTADRM-EADLVPKHGIEIDFIR--ISGLRGK-GIKALIAAPLRIFNAW-RQARAIM-KAYKP 97 (364)
T ss_dssp HHHHHHHTT-TCEEEEEECTTST-HHHHGGGGTCEEEECC--CCCCTTC-CHHHHHTCHHHHHHHH-HHHHHHH-HHHCC
T ss_pred HHHHHHHHc-CCEEEEEecCCcc-hhhhccccCCceEEec--CCccCcC-ccHHHHHHHHHHHHHH-HHHHHHH-HhcCC
Confidence 466777775 9999999976532 2223344588888887 2211101 0011111111111111 1112222 23699
Q ss_pred cEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHHHHH
Q 015058 103 DVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELA 182 (414)
Q Consensus 103 Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~~l~ 182 (414)
|+||++.+. ..+.+.++++..++|+|++.|+... . +.++++++.+|.+++.++..
T Consensus 98 Dvv~~~~~~---~~~~~~~~~~~~~~p~v~~~~~~~~----------~-------~~~~~~~~~~d~v~~~~~~~----- 152 (364)
T 1f0k_A 98 DVVLGMGGY---VSGPGGLAAWSLGIPVVLHEQNGIA----------G-------LTNKWLAKIATKVMQAFPGA----- 152 (364)
T ss_dssp SEEEECSST---THHHHHHHHHHTTCCEEEEECSSSC----------C-------HHHHHHTTTCSEEEESSTTS-----
T ss_pred CEEEEeCCc---CchHHHHHHHHcCCCEEEEecCCCC----------c-------HHHHHHHHhCCEEEecChhh-----
Confidence 999999762 2233556667789999999888521 1 13457778999999998764
Q ss_pred HhhCCcEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeEE
Q 015058 183 QNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALV 261 (414)
Q Consensus 183 ~~~gi~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i 261 (414)
+. ++.+++|+ +.+.|.+.. .+ +++ +++++++.++
T Consensus 153 --~~-~~~~i~n~v~~~~~~~~~--~~----~~~------------------------------------~~~~~~~~il 187 (364)
T 1f0k_A 153 --FP-NAEVVGNPVRTDVLALPL--PQ----QRL------------------------------------AGREGPVRVL 187 (364)
T ss_dssp --SS-SCEECCCCCCHHHHTSCC--HH----HHH------------------------------------TTCCSSEEEE
T ss_pred --cC-CceEeCCccchhhcccch--hh----hhc------------------------------------ccCCCCcEEE
Confidence 22 57789998 555554432 11 122 2334555567
Q ss_pred EEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEE-EEEEcCCCChHHHHHHHHHcCC
Q 015058 262 VSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL-FIITGKGPDKESYEEKIRRLRL 340 (414)
Q Consensus 262 ~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~-liI~G~G~~~e~l~~~i~~l~l 340 (414)
++.|++.++|+++.+++|++.+.+ +++ ++|+|+|+ .+++++.++++++
T Consensus 188 ~~~g~~~~~k~~~~li~a~~~l~~------------------------------~~~~l~i~G~~~-~~~l~~~~~~~~~ 236 (364)
T 1f0k_A 188 VVGGSQGARILNQTMPQVAAKLGD------------------------------SVTIWHQSGKGS-QQSVEQAYAEAGQ 236 (364)
T ss_dssp EECTTTCCHHHHHHHHHHHHHHGG------------------------------GEEEEEECCTTC-HHHHHHHHHHTTC
T ss_pred EEcCchHhHHHHHHHHHHHHHhcC------------------------------CcEEEEEcCCch-HHHHHHHHhhcCC
Confidence 788899999999999999998751 577 57899998 5889999999998
Q ss_pred CcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 341 ~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
++|.|.| ++ ++++.+|+.||++|+++ | |++++|||+||+|||+++++|.
T Consensus 237 ~~v~~~g-~~--~~~~~~~~~ad~~v~~s----g---~~~~~EAma~G~Pvi~~~~~g~ 285 (364)
T 1f0k_A 237 PQHKVTE-FI--DDMAAAYAWADVVVCRS----G---ALTVSEIAAAGLPALFVPFQHK 285 (364)
T ss_dssp TTSEEES-CC--SCHHHHHHHCSEEEECC----C---HHHHHHHHHHTCCEEECCCCCT
T ss_pred CceEEec-ch--hhHHHHHHhCCEEEECC----c---hHHHHHHHHhCCCEEEeeCCCC
Confidence 8999998 65 89999999999999752 3 9999999999999999998863
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-25 Score=232.70 Aligned_cols=227 Identities=14% Similarity=0.021 Sum_probs=157.0
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHh-------hcCCeEEEEEcCcchhh----hhhc-cCC-CcHHHHH-----------
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASS-------LRRSAFIVDWHNFGYTL----LSLS-LGR-RSHFVSI----------- 155 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~-------~~~~~~Iv~~H~~~~~l----~~~~-~~~-~~~~~~i----------- 155 (414)
..+||+|+|++ .+++++.+++. +.++|+|+|+|+..+.- .... .+. .......
T Consensus 152 ~~ddIiH~hDW---~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (536)
T 3vue_A 152 GEDVVFVCNDW---HTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVE 228 (536)
T ss_dssp CSCEEEEEESG---GGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTC
T ss_pred CCCEEEEECcc---hHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhccccccc
Confidence 35678899987 55555544442 24799999999863210 0000 010 0000000
Q ss_pred --HHHHHHHHhccCCEEEEeCHHHHHHHHHhhCC-----------cEEEecCC-CCCCcCCCCh-------------H--
Q 015058 156 --YRWIEKYYGKMANGCLCVTQAMQHELAQNWGI-----------KATVLYDQ-PPEFFHPTSL-------------E-- 206 (414)
Q Consensus 156 --~~~~Ek~~~k~ad~ii~vS~~~~~~l~~~~gi-----------~i~vI~n~-~~~~f~p~~~-------------~-- 206 (414)
.-.++|.....||.|+|||+.+++++.+.++. ++.+|+|| |.+.|.|... +
T Consensus 229 ~~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K 308 (536)
T 3vue_A 229 GRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAK 308 (536)
T ss_dssp EEEEEHHHHHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHH
T ss_pred ccchhHHHHHHHhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhh
Confidence 00134566678999999999999998765432 38999999 8888887421 1
Q ss_pred --HHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhH
Q 015058 207 --EKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYD 284 (414)
Q Consensus 207 --~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~ 284 (414)
.|..++++++ +..+++.| +|+++||++++||++.|++|+..+.
T Consensus 309 ~~~k~~l~~~~g----------------------------------l~~d~~~p-~i~~vgRl~~~Kg~~~li~a~~~l~ 353 (536)
T 3vue_A 309 ALNKEALQAEAG----------------------------------LPVDRKIP-LIAFIGRLEEQKGPDVMAAAIPELM 353 (536)
T ss_dssp HHHHHHHHHHTT----------------------------------SCCCTTSC-EEEEECCBSGGGCHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcC----------------------------------CCCCCCCc-EEEEEeeccccCChHHHHHHHHHhH
Confidence 1223333322 12245666 9999999999999999999999886
Q ss_pred HHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChH--HHHHHHHHcCCCcEEEecCCCChhhHHHHHhhc
Q 015058 285 RRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE--SYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSA 362 (414)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e--~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~a 362 (414)
+ ++.+|+|+|.|+... .+++...+++. +|.|.+ ..+.++++.+|++|
T Consensus 354 ~-----------------------------~~~~l~l~G~G~~~~~~~~~~~~~~~~~-~v~~~~-~~~~~~~~~~~~~a 402 (536)
T 3vue_A 354 Q-----------------------------EDVQIVLLGTGKKKFEKLLKSMEEKYPG-KVRAVV-KFNAPLAHLIMAGA 402 (536)
T ss_dssp T-----------------------------SSCEEEEECCBCHHHHHHHHHHHHHSTT-TEEEEC-SCCHHHHHHHHHHC
T ss_pred h-----------------------------hCCeEEEEeccCchHHHHHHHHHhhcCC-ceEEEE-eccHHHHHHHHHhh
Confidence 4 356888888887543 44444444332 789987 77999999999999
Q ss_pred cEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 363 DLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 363 Dl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
|+||+|+ ..|++|+.++|||+||+|||+|+++|
T Consensus 403 D~~v~PS---~~E~fgl~~lEAma~G~PvI~s~~gG 435 (536)
T 3vue_A 403 DVLAVPS---RFEPCGLIQLQGMRYGTPCACASTGG 435 (536)
T ss_dssp SEEEECC---SCCSSCSHHHHHHHTTCCEEECSCTH
T ss_pred heeeccc---ccCCCCHHHHHHHHcCCCEEEcCCCC
Confidence 9999874 35789999999999999999999875
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-26 Score=233.14 Aligned_cols=288 Identities=12% Similarity=0.047 Sum_probs=180.8
Q ss_pred EEEEEEeCCC--C--CChHHHHHHHHHHhhCCCcEEEEecCCCC-------C-------CcccccCCCeEEEEeecCCCC
Q 015058 6 RACVVVLGDL--G--RSPRMQYQALSLARQMSLEVDVVAYGGSK-------P-------HAAILEHPSIHIHTMTQWPTI 67 (414)
Q Consensus 6 ~~~v~~~~d~--~--~~~r~~~~a~~La~~~g~eV~vv~~~~~~-------~-------~~~~~~~~~i~i~~v~~~~~~ 67 (414)
+|+|+.+++. . ..+...+.++.|+++ | +|+|++..... . .......+++++++.+.+..+
T Consensus 14 ~MkIl~is~~~~p~~~~~~~~~l~~~l~~~-G-~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~~~~ 91 (406)
T 2hy7_A 14 RPCYLVLSSHDFRTPRRANIHFITDQLALR-G-TTRFFSLRYSRLSRMKGDMRLPLDDTANTVVSHNGVDCYLWRTTVHP 91 (406)
T ss_dssp CSCEEEEESSCTTSSSCCHHHHHHHHHHHH-S-CEEEEECSCBTTHHHHTCTTGGGGGGTTSEEEETTEEEEECCBSSCC
T ss_pred CceEEEEecccCCChhhhhHhHHHHHHHhC-C-ceEEEEecccHHHHhhccchhhhhccCccceecCCeEEEeeccccCC
Confidence 3555555543 2 334556777888887 9 99999643110 0 011112468888876522211
Q ss_pred CCCCCCchHHHHHHHHHHHH--HHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhc
Q 015058 68 PRGLPKVLKPVLLLLKPLIQ--FFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLS 145 (414)
Q Consensus 68 ~~~~~~~~~~~~~l~k~l~~--~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~ 145 (414)
..........+......... +...+..+ ..++|+||.++. ....++.+ ++..++|+++++|+.... ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~DvIh~~~~---~~~~~~~~-~~~~~~p~v~~~h~~~~~-~~-- 161 (406)
T 2hy7_A 92 FNTRRSWLRPVEDAMFRWYAAHPPKQLLDW---MRESDVIVFESG---IAVAFIEL-AKRVNPAAKLVYRASDGL-ST-- 161 (406)
T ss_dssp CCCCCGGGHHHHHHHHHHHHHCCCHHHHHH---HHHCSEEEEESS---GGGGGHHH-HHHHCTTSEEEEEESSCH-HH--
T ss_pred ccccchhhhccchhHHHHHHHhHHHHHHHH---hcCCCEEEECCc---hHHHHHHH-HHHhCCCEEEEEeccchh-hc--
Confidence 11011111111110000000 00011111 137999995433 22111223 345689999999975420 00
Q ss_pred cCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHHHHHHhhCCcEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCC
Q 015058 146 LGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLG 224 (414)
Q Consensus 146 ~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~~l~~~~gi~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~ 224 (414)
.... ...+++++..++.||.++|+|+.+++.+.+. + ++.+|||| |.+.|.|...
T Consensus 162 ~~~~----~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~-~-~i~vipngvd~~~f~~~~~------------------- 216 (406)
T 2hy7_A 162 INVA----SYIEREFDRVAPTLDVIALVSPAMAAEVVSR-D-NVFHVGHGVDHNLDQLGDP------------------- 216 (406)
T ss_dssp HTCC----HHHHHHHHHHGGGCSEEEESCGGGGGGCSCS-T-TEEECCCCBCTTHHHHHCS-------------------
T ss_pred cccc----HHHHHHHHHHHHhCCEEEEcCHHHHHHHHhc-C-CEEEEcCCcChHhcCcccc-------------------
Confidence 1111 2345677888899999999999999988654 5 89999999 7665533210
Q ss_pred ccccccCCCCCCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhh
Q 015058 225 VQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLK 304 (414)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~ 304 (414)
. +.+...+++|+||+.++||+ ++ .+.+
T Consensus 217 ---------------------------~-~~~~~~~i~~vGrl~~~Kg~---~~---~l~~------------------- 243 (406)
T 2hy7_A 217 ---------------------------S-PYAEGIHAVAVGSMLFDPEF---FV---VASK------------------- 243 (406)
T ss_dssp ---------------------------C-SCCSSEEEEEECCTTBCHHH---HH---HHHH-------------------
T ss_pred ---------------------------c-ccCCCcEEEEEeccccccCH---HH---HHHH-------------------
Confidence 0 11222489999999999998 33 3333
Q ss_pred hhcCCccCCCCcEEEEEEcCCCChHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHH
Q 015058 305 EISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCY 383 (414)
Q Consensus 305 ~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~E 383 (414)
..|+++|+|+|+|+ ++++++. +|+|+| +++.+|++.+|++||++|+|+. .+++|++++|
T Consensus 244 --------~~~~~~l~ivG~g~--------~~~~~l~~~V~f~G-~~~~~~l~~~~~~adv~v~ps~---~E~~~~~~lE 303 (406)
T 2hy7_A 244 --------AFPQVTFHVIGSGM--------GRHPGYGDNVIVYG-EMKHAQTIGYIKHARFGIAPYA---SEQVPVYLAD 303 (406)
T ss_dssp --------HCTTEEEEEESCSS--------CCCTTCCTTEEEEC-CCCHHHHHHHHHTCSEEECCBS---CSCCCTTHHH
T ss_pred --------hCCCeEEEEEeCch--------HHhcCCCCCEEEcC-CCCHHHHHHHHHhcCEEEECCC---cccCchHHHH
Confidence 25789999999998 6677887 999997 9999999999999999998743 4678888888
Q ss_pred HH-------HcCCeEEEeee--CCcccch
Q 015058 384 CW-------YSRYSLKLLWT--CSVVGCL 403 (414)
Q Consensus 384 am-------a~G~Pvi~s~~--~~~~~~~ 403 (414)
|| |||+|||+|++ .+.+|.+
T Consensus 304 Am~Kl~eYla~G~PVIas~~v~~~~~G~l 332 (406)
T 2hy7_A 304 SSMKLLQYDFFGLPAVCPNAVVGPYKSRF 332 (406)
T ss_dssp HCHHHHHHHHHTCCEEEEGGGTCSCSSEE
T ss_pred HHHHHHHHhhCCCcEEEehhcccCcceEE
Confidence 88 99999999985 4556766
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-23 Score=213.82 Aligned_cols=197 Identities=13% Similarity=0.081 Sum_probs=139.7
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHH-h------hcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCC--EE
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWAS-S------LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMAN--GC 170 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~-~------~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad--~i 170 (414)
.+||+||++.+ .+..++..+. + ..+.|++..+|++... +..... .+++++..++.++ .+
T Consensus 131 ~~~Dvv~a~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~----~~~~~~~~~~~~~~~~v 198 (413)
T 2x0d_A 131 AKHDIFIATAW---WTAYAAQRIVSWQSDTYGIPPNKILYIIQDFEPG-----FYQWSS----QYVLAESTYKYRGPQIA 198 (413)
T ss_dssp CTTEEEEECSH---HHHHHHHHHHHHHHHHHTCCCCCEEEEECSCGGG-----GSCSSH----HHHHHHHTTSCCSCEEE
T ss_pred CCCCEEEEehH---HHHHHHHHhhhhhhhhcccccCcEEEEEeechhh-----cCccCh----HHHHHHHHhccCCceEE
Confidence 58999999875 3333332221 0 1256777777776321 111121 1234566677765 68
Q ss_pred EEeCHHHHHHHHHhhCCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeec
Q 015058 171 LCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSL 246 (414)
Q Consensus 171 i~vS~~~~~~l~~~~gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (414)
+|+|+.+++.+.+. |.+ +.+++|+ |.+.|.+..
T Consensus 199 i~~S~~~~~~l~~~-g~~~~~~~~i~~g~d~~~~~~~~------------------------------------------ 235 (413)
T 2x0d_A 199 VFNSELLKQYFNNK-GYNFTDEYFFQPKINTTLKNYIN------------------------------------------ 235 (413)
T ss_dssp EEESHHHHHHHHHH-TCCCSEEEEECCCCCHHHHTTTT------------------------------------------
T ss_pred EEcCHHHHHHHHHc-CCCCCceEEeCCCcCchhhcccc------------------------------------------
Confidence 99999999999875 543 7788887 443332210
Q ss_pred cccccccCCCCCeEEEEeccC-CCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCc---EEEEEE
Q 015058 247 AGIDVFLKPNRPALVVSSTSW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR---LLFIIT 322 (414)
Q Consensus 247 ~~~~~~l~~~~~~~i~~vgrl-~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---i~liI~ 322 (414)
...++++ .|+++||+ .++||++.||+|++.+.++ +|+ ++|+|+
T Consensus 236 -----~~~~~~~-~il~~gr~~~~~Kg~~~li~A~~~l~~~---------------------------~~~~~~~~l~iv 282 (413)
T 2x0d_A 236 -----DKRQKEK-IILVYGRPSVKRNAFTLIVEALKIFVQK---------------------------YDRSNEWKIISV 282 (413)
T ss_dssp -----SCCCCCS-EEEEEECTTCGGGCHHHHHHHHHHHHHH---------------------------CTTGGGCEEEEE
T ss_pred -----cccCCCC-EEEEEecCchhccCHHHHHHHHHHHHHh---------------------------CCCCCceEEEEE
Confidence 0112333 67788996 7899999999999998763 453 899999
Q ss_pred cCCCChHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEee
Q 015058 323 GKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLW 395 (414)
Q Consensus 323 G~G~~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~ 395 (414)
|+|+.+ .++++. +|+|+| +++.+|++.+|++||+||+++. .+++|++++||||||+|||+++
T Consensus 283 G~~~~~-------~~l~~~~~v~f~G-~~~~~~l~~~~~~adv~v~pS~---~E~~g~~~lEAmA~G~PVV~~~ 345 (413)
T 2x0d_A 283 GEKHKD-------IALGKGIHLNSLG-KLTLEDYADLLKRSSIGISLMI---SPHPSYPPLEMAHFGLRVITNK 345 (413)
T ss_dssp ESCCCC-------EEEETTEEEEEEE-SCCHHHHHHHHHHCCEEECCCS---SSSCCSHHHHHHHTTCEEEEEC
T ss_pred cCCchh-------hhcCCcCcEEEcC-CCCHHHHHHHHHhCCEEEEecC---CCCCCcHHHHHHhCCCcEEEeC
Confidence 999875 356777 999998 9999999999999999997643 3578899999999999999954
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.4e-24 Score=209.75 Aligned_cols=208 Identities=12% Similarity=-0.011 Sum_probs=145.1
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCC-CcHHHHHHHHHHHHHhccCCEEEEeCHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR-RSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~-~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~ 177 (414)
..+||+||+|++. ...+++.++++..++|+|++.|+.. + ... ..+.. ...++.+.+.+|.++|+|+..
T Consensus 93 ~~~pDvv~~~~~~--~~~~~~~~~~~~~~ip~v~~~~~~~-~-----~~~~~~~~~---~~~~~~~~~~~d~ii~~s~~~ 161 (375)
T 3beo_A 93 EAKPDIVLVHGDT--TTTFIASLAAFYNQIPVGHVEAGLR-T-----WDKYSPYPE---EMNRQLTGVMADLHFSPTAKS 161 (375)
T ss_dssp HHCCSEEEEETTS--HHHHHHHHHHHHTTCCEEEESCCCC-C-----SCTTSSTTH---HHHHHHHHHHCSEEEESSHHH
T ss_pred HhCCCEEEEeCCc--hHHHHHHHHHHHHCCCEEEEecccc-c-----ccccCCChh---HhhhhHHhhhhheeeCCCHHH
Confidence 3699999998752 2334455667778999998777652 1 111 11111 123345556799999999999
Q ss_pred HHHHHHhhCCc---EEEecCC--CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccc
Q 015058 178 QHELAQNWGIK---ATVLYDQ--PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF 252 (414)
Q Consensus 178 ~~~l~~~~gi~---i~vI~n~--~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (414)
++.+.+ +|++ +.+++|+ |...|.+... .+.+++++
T Consensus 162 ~~~~~~-~g~~~~~i~vi~n~~~d~~~~~~~~~-~~~~~~~~-------------------------------------- 201 (375)
T 3beo_A 162 ATNLQK-ENKDESRIFITGNTAIDALKTTVKET-YSHPVLEK-------------------------------------- 201 (375)
T ss_dssp HHHHHH-TTCCGGGEEECCCHHHHHHHHHCCSS-CCCHHHHT--------------------------------------
T ss_pred HHHHHH-cCCCcccEEEECChhHhhhhhhhhhh-hhHHHHHh--------------------------------------
Confidence 999876 4764 8899998 4333333210 11122222
Q ss_pred cCCCCCeEEEEeccCCCC-CChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHH
Q 015058 253 LKPNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 331 (414)
Q Consensus 253 l~~~~~~~i~~vgrl~~~-Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l 331 (414)
++ +++++++++||+.+. ||++.|++|++.+.++ +|+++++ +|.|+. +++
T Consensus 202 ~~-~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~---------------------------~~~~~~i-~~~g~~-~~~ 251 (375)
T 3beo_A 202 LG-NNRLVLMTAHRRENLGEPMRNMFRAIKRLVDK---------------------------HEDVQVV-YPVHMN-PVV 251 (375)
T ss_dssp TT-TSEEEEEECCCGGGTTHHHHHHHHHHHHHHHH---------------------------CTTEEEE-EECCSC-HHH
T ss_pred cc-CCCeEEEEecccccchhHHHHHHHHHHHHHhh---------------------------CCCeEEE-EeCCCC-HHH
Confidence 11 334578899999886 9999999999998763 6788865 477876 456
Q ss_pred HHHHHHc-CC-CcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 332 EEKIRRL-RL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 332 ~~~i~~l-~l-~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
++.++++ +. .+|+|.| +++.+|++.+|++||++|+++ +..++|||+||+|||+++.
T Consensus 252 ~~~~~~~~~~~~~v~~~g-~~~~~~~~~~~~~ad~~v~~s--------g~~~lEA~a~G~Pvi~~~~ 309 (375)
T 3beo_A 252 RETANDILGDYGRIHLIE-PLDVIDFHNVAARSYLMLTDS--------GGVQEEAPSLGVPVLVLRD 309 (375)
T ss_dssp HHHHHHHHTTCTTEEEEC-CCCHHHHHHHHHTCSEEEECC--------HHHHHHHHHHTCCEEECSS
T ss_pred HHHHHHHhhccCCEEEeC-CCCHHHHHHHHHhCcEEEECC--------CChHHHHHhcCCCEEEecC
Confidence 6666664 43 4899997 888899999999999999753 4568999999999999954
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=6e-23 Score=201.88 Aligned_cols=214 Identities=12% Similarity=0.018 Sum_probs=144.9
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCC-CcHHHHHHHHHHHHHhccCCEEEEeCHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR-RSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~-~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~ 177 (414)
..+||+||+|.+. ...+.+.++++..++|+|++.|+... +.. ..+... ...+++.+.+|.++|+|+..
T Consensus 84 ~~~pDvv~~~~~~--~~~~~~~~~a~~~~ip~v~~~~~~~~------~~~~~~~~~~---~~~~~~~~~~d~ii~~s~~~ 152 (384)
T 1vgv_A 84 EFKPDVVLVHGDT--TTTLATSLAAFYQRIPVGHVEAGLRT------GDLYSPWPEE---ANRTLTGHLAMYHFSPTETS 152 (384)
T ss_dssp HHCCSEEEEETTC--HHHHHHHHHHHTTTCCEEEESCCCCC------SCTTSSTTHH---HHHHHHHTTCSEEEESSHHH
T ss_pred HhCCCEEEEeCCc--hHHHHHHHHHHHHCCCEEEEeccccc------ccccCCCchH---hhHHHHHhhccEEEcCcHHH
Confidence 3699999999751 23344556667789999988887631 111 111111 12234467899999999999
Q ss_pred HHHHHHhhCCc---EEEecCC--CCCCcCCCC----hHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccc
Q 015058 178 QHELAQNWGIK---ATVLYDQ--PPEFFHPTS----LEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAG 248 (414)
Q Consensus 178 ~~~l~~~~gi~---i~vI~n~--~~~~f~p~~----~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (414)
++.+.+ +|++ +.+++|+ |...+.+.. ...+.+++++
T Consensus 153 ~~~l~~-~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~---------------------------------- 197 (384)
T 1vgv_A 153 RQNLLR-ENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAAN---------------------------------- 197 (384)
T ss_dssp HHHHHH-TTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTT----------------------------------
T ss_pred HHHHHH-cCCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHh----------------------------------
Confidence 999876 4774 8889988 221111100 0001122322
Q ss_pred cccc-cCCCCCeEEEEeccCCCC-CChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEE-cCC
Q 015058 249 IDVF-LKPNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKG 325 (414)
Q Consensus 249 ~~~~-l~~~~~~~i~~vgrl~~~-Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~-G~G 325 (414)
++ ++++++.+++++||+.+. ||++.|++|+..+.++ .|+++|++. |+|
T Consensus 198 --~~~~~~~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~---------------------------~~~~~l~i~~g~~ 248 (384)
T 1vgv_A 198 --YPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATT---------------------------HQDIQIVYPVHLN 248 (384)
T ss_dssp --CTTCCTTSEEEEEECCCBSSCCHHHHHHHHHHHHHHHH---------------------------CTTEEEEEECCBC
T ss_pred --ccccCCCCCEEEEEeCCccccchHHHHHHHHHHHHHhh---------------------------CCCeEEEEEcCCC
Confidence 23 434455688899999886 9999999999998763 578999885 655
Q ss_pred C-ChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee-CC
Q 015058 326 P-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT-CS 398 (414)
Q Consensus 326 ~-~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~-~~ 398 (414)
+ .++.+++.++. ..+|.|.| +++.+|++.+|++||++|+++ +..++|||+||+|||+++. +|
T Consensus 249 ~~~~~~l~~~~~~--~~~v~~~g-~~~~~~~~~~~~~ad~~v~~S--------g~~~lEA~a~G~PvI~~~~~~~ 312 (384)
T 1vgv_A 249 PNVREPVNRILGH--VKNVILID-PQEYLPFVWLMNHAWLILTDS--------GGIQEEAPSLGKPVLVMRDTTE 312 (384)
T ss_dssp HHHHHHHHHHHTT--CTTEEEEC-CCCHHHHHHHHHHCSEEEESS--------STGGGTGGGGTCCEEEESSCCS
T ss_pred HHHHHHHHHHhhc--CCCEEEeC-CCCHHHHHHHHHhCcEEEECC--------cchHHHHHHcCCCEEEccCCCC
Confidence 4 34455544322 24899987 888899999999999999753 1237899999999999986 44
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4e-23 Score=214.78 Aligned_cols=199 Identities=12% Similarity=0.053 Sum_probs=144.9
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~ 179 (414)
.+|||||.++..+... .++.++. +..|++++||+.+.+ .+.. ...+..+|.++++|+..++
T Consensus 281 ~~~Div~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~-----~~~~-----------~~~~~~~d~~i~~s~~~~~ 341 (568)
T 2vsy_A 281 HGIDLLFDLRGWGGGG-RPEVFAL--RPAPVQVNWLAYPGT-----SGAP-----------WMDYVLGDAFALPPALEPF 341 (568)
T ss_dssp TTCSEEEECSSCTTCS-SCHHHHT--CCSSEEEEESSSSSC-----CCCT-----------TCCEEEECTTTSCTTTGGG
T ss_pred CCCCEEEECCCCCCcc-hHHHHhc--CCCceeEeeecCCcc-----cCCC-----------CceEEEECCCcCCcccccC
Confidence 7999999875422111 1223333 346888889886431 1100 1223468999999987643
Q ss_pred HHHHhhCCcEEEecCCCCCCcCCCChH---HHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCC
Q 015058 180 ELAQNWGIKATVLYDQPPEFFHPTSLE---EKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN 256 (414)
Q Consensus 180 ~l~~~~gi~i~vI~n~~~~~f~p~~~~---~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 256 (414)
++.++.+|||. |.|.+.. .+...+ ..++++++
T Consensus 342 -----~~~~i~~ipn~----~~~~~~~~~~~~~~~r------------------------------------~~~~~~~~ 376 (568)
T 2vsy_A 342 -----YSEHVLRLQGA----FQPSDTSRVVAEPPSR------------------------------------TQCGLPEQ 376 (568)
T ss_dssp -----CSSEEEECSSC----SCCCCTTCCCCCCCCT------------------------------------GGGTCCTT
T ss_pred -----CcceeEcCCCc----CCCCCCCCCCCCCCCc------------------------------------cccCCCCC
Confidence 45568999984 3332100 000111 12345544
Q ss_pred CCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEc-CCCChHHHHHHH
Q 015058 257 RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG-KGPDKESYEEKI 335 (414)
Q Consensus 257 ~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G-~G~~~e~l~~~i 335 (414)
. +++++||+.+ ||++.+++|+..+.++ .|+++|+|+| +|+.++++++.+
T Consensus 377 ~--~v~~~g~~~~-K~~~~li~a~~~l~~~---------------------------~~~~~l~i~G~~g~~~~~l~~~~ 426 (568)
T 2vsy_A 377 G--VVLCCFNNSY-KLNPQSMARMLAVLRE---------------------------VPDSVLWLLSGPGEADARLRAFA 426 (568)
T ss_dssp S--CEEEECCCGG-GCCHHHHHHHHHHHHH---------------------------CTTCEEEEECCSTTHHHHHHHHH
T ss_pred C--EEEEeCCccc-cCCHHHHHHHHHHHHh---------------------------CCCcEEEEecCCHHHHHHHHHHH
Confidence 3 5669999999 9999999999998763 6899999999 999999999999
Q ss_pred HHcCCC--cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEE-------eeeC
Q 015058 336 RRLRLK--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKL-------LWTC 397 (414)
Q Consensus 336 ~~l~l~--~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~-------s~~~ 397 (414)
+++|++ +|+|+| +++.+|++.+|+.||++|.|+. . ++|++++|||+||+|||+ |+++
T Consensus 427 ~~~~l~~~~v~~~g-~~~~~~~~~~~~~adv~v~ps~---~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~ 492 (568)
T 2vsy_A 427 HAQGVDAQRLVFMP-KLPHPQYLARYRHADLFLDTHP---Y-NAHTTASDALWTGCPVLTTPGETFAARVA 492 (568)
T ss_dssp HHTTCCGGGEEEEC-CCCHHHHHHHGGGCSEEECCSS---S-CCSHHHHHHHHTTCCEEBCCCSSGGGSHH
T ss_pred HHcCCChhHEEeeC-CCCHHHHHHHHhcCCEEeeCCC---C-CCcHHHHHHHhCCCCEEeccCCCchHHHH
Confidence 999995 899997 9999999999999999997632 3 789999999999999999 8887
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.86 E-value=2.5e-22 Score=197.57 Aligned_cols=206 Identities=15% Similarity=0.028 Sum_probs=139.1
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCC-CcHHHHHHHHHHHHHhccCCEEEEeCHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR-RSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~-~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~ 177 (414)
..+||+||+|.++ ...+.+.++++..++|++...|+.. + +.. ..+.. ...++++.+.+|.++++|+..
T Consensus 89 ~~~pDvv~~~~~~--~~~~~~~~~a~~~~ip~v~~~~~~~-~-----~~~~~~~~~---~~~~~~~~~~~~~~~~~s~~~ 157 (376)
T 1v4v_A 89 EMGADYVLVHGDT--LTTFAVAWAAFLEGIPVGHVEAGLR-S-----GNLKEPFPE---EANRRLTDVLTDLDFAPTPLA 157 (376)
T ss_dssp HTTCSEEEEESSC--HHHHHHHHHHHHTTCCEEEETCCCC-C-----SCTTSSTTH---HHHHHHHHHHCSEEEESSHHH
T ss_pred HcCCCEEEEeCCh--HHHHHHHHHHHHhCCCEEEEeCCCc-c-----ccccCCCch---HHHHHHHHHHhceeeCCCHHH
Confidence 4799999999762 2334455677778999864333331 1 111 11111 133456778899999999999
Q ss_pred HHHHHHhhCCc---EEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccC
Q 015058 178 QHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (414)
Q Consensus 178 ~~~l~~~~gi~---i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 254 (414)
++.+.+. |++ +.+++|+-.+.+.+. .-+..+ .. .++
T Consensus 158 ~~~l~~~-g~~~~ki~vi~n~~~d~~~~~------~~~~~~--------------------------------~~--~~~ 196 (376)
T 1v4v_A 158 KANLLKE-GKREEGILVTGQTGVDAVLLA------AKLGRL--------------------------------PE--GLP 196 (376)
T ss_dssp HHHHHTT-TCCGGGEEECCCHHHHHHHHH------HHHCCC--------------------------------CT--TCC
T ss_pred HHHHHHc-CCCcceEEEECCchHHHHhhh------hhhhHH--------------------------------HH--hcC
Confidence 9998764 765 778887611111000 000000 00 112
Q ss_pred CCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEE-cCCC-ChHHHH
Q 015058 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGP-DKESYE 332 (414)
Q Consensus 255 ~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~-G~G~-~~e~l~ 332 (414)
+++.+++++||+.+.||++.|++|++.+.++ +|+++++++ |+|+ .++.++
T Consensus 197 -~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~---------------------------~~~~~lv~~~g~~~~~~~~l~ 248 (376)
T 1v4v_A 197 -EGPYVTVTMHRRENWPLLSDLAQALKRVAEA---------------------------FPHLTFVYPVHLNPVVREAVF 248 (376)
T ss_dssp -SSCEEEECCCCGGGGGGHHHHHHHHHHHHHH---------------------------CTTSEEEEECCSCHHHHHHHH
T ss_pred -CCCEEEEEeCcccchHHHHHHHHHHHHHHhh---------------------------CCCeEEEEECCCCHHHHHHHH
Confidence 3345788899998888999999999998763 678888885 8776 466777
Q ss_pred HHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEee
Q 015058 333 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLW 395 (414)
Q Consensus 333 ~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~ 395 (414)
++++. ..+|.|+| ++...|++.+|++||++|+++ .+ .++|||+||+|||++.
T Consensus 249 ~~~~~--~~~v~~~g-~~g~~~~~~~~~~ad~~v~~S-----~g---~~lEA~a~G~PvI~~~ 300 (376)
T 1v4v_A 249 PVLKG--VRNFVLLD-PLEYGSMAALMRASLLLVTDS-----GG---LQEEGAALGVPVVVLR 300 (376)
T ss_dssp HHHTT--CTTEEEEC-CCCHHHHHHHHHTEEEEEESC-----HH---HHHHHHHTTCCEEECS
T ss_pred HHhcc--CCCEEEEC-CCCHHHHHHHHHhCcEEEECC-----cC---HHHHHHHcCCCEEecc
Confidence 66532 34899996 777889999999999999652 22 2779999999999874
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.5e-19 Score=194.42 Aligned_cols=248 Identities=15% Similarity=0.051 Sum_probs=166.2
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHh-hcCCeEEEEEcCcchhhhhhcc-CCCcHHH----------------HHHHHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSL-GRRSHFV----------------SIYRWIEK 161 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~-~~~~~~Iv~~H~~~~~l~~~~~-~~~~~~~----------------~i~~~~Ek 161 (414)
.+|||+|+|.+ .++.++.+++. ..++|.|+|.|+..+.-. +.. +...+.. .-...+||
T Consensus 180 ~~pdIiH~HDW---~tg~~~~~Lk~~~~~i~tVfTiH~telGR~-lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EK 255 (725)
T 3nb0_A 180 QHAIVAHFHEW---LAGVALPLCRKRRIDVVTIFTTHATLLGRY-LCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIER 255 (725)
T ss_dssp SEEEEEEEESG---GGCTHHHHHHHTTCSCEEEEEESSCHHHHH-HTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCcEEEeCch---hhhHHHHHHHHhCCCCCEEEEEecchhhhh-hhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHH
Confidence 46999999998 66666656553 458999999999832110 000 1000000 01235688
Q ss_pred HHhccCCEEEEeCHHHHHHHHHhhCCc-EEEecCC-CCCCcCCCChH--HHHHHHHHhhhhccCCCCccccccCCCCCCC
Q 015058 162 YYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTSLE--EKHELFCRLNKILHQPLGVQDCVSNGMEGQK 237 (414)
Q Consensus 162 ~~~k~ad~ii~vS~~~~~~l~~~~gi~-i~vI~n~-~~~~f~p~~~~--~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 237 (414)
.....||.|+|||+.+++++...++.+ -.+|+|| |.+.|.|.... .+.+.++++..-.
T Consensus 256 aga~~AD~ITTVS~~yA~Ei~~Ll~r~~d~iIpNGID~~~f~p~~~~~~~k~~aK~klq~~l------------------ 317 (725)
T 3nb0_A 256 AAAHSADVFTTVSQITAFEAEHLLKRKPDGILPNGLNVIKFQAFHEFQNLHALKKEKINDFV------------------ 317 (725)
T ss_dssp HHHHHSSEEEESSHHHHHHHHHHTSSCCSEECCCCBCCCCCSSTTHHHHHHHHHHHHHHHHH------------------
T ss_pred HHHHhCCEEEECCHHHHHHHHHHhcCCCCEEEcCCccccccCcchhhHHHHHHHHHHHHHHH------------------
Confidence 888999999999999999998876665 3449999 99999886321 1223333331100
Q ss_pred CccceeeeccccccccCCCCCeEEEEeccCC-CCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCc
Q 015058 238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR 316 (414)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~-~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 316 (414)
+..| .+-+++++++..+++.+||++ ++||++.+++|+..+.++... ..+ ..+-
T Consensus 318 --~~~~----~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~--~~~------------------~~~v 371 (725)
T 3nb0_A 318 --RGHF----HGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKV--SGS------------------KKTV 371 (725)
T ss_dssp --HHHT----TTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHH--TTC------------------CCEE
T ss_pred --Hhhc----ccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhh--ccC------------------CCcE
Confidence 0000 112345444545777799999 789999999999998764100 000 0122
Q ss_pred EEEEEEcCC-----------------------------------------------------------------------
Q 015058 317 LLFIITGKG----------------------------------------------------------------------- 325 (414)
Q Consensus 317 i~liI~G~G----------------------------------------------------------------------- 325 (414)
+.|+|+..|
T Consensus 372 vafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~ 451 (725)
T 3nb0_A 372 VAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILA 451 (725)
T ss_dssp EEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHh
Confidence 444444433
Q ss_pred ------------------CChHHHHHHHHHcCCC-c------EEEecCCCChh------hHHHHHhhccEEEeeccCCCC
Q 015058 326 ------------------PDKESYEEKIRRLRLK-R------VAFRTMWLSAE------DYPLLLGSADLGVCLHTSSSG 374 (414)
Q Consensus 326 ------------------~~~e~l~~~i~~l~l~-~------V~f~g~~v~~e------d~~~~l~~aDl~V~~~~s~~g 374 (414)
...+.+...++++++. + |.|.+.|++.+ |++.+|++||+||+|+ ..
T Consensus 452 ~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS---~~ 528 (725)
T 3nb0_A 452 LRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPS---YY 528 (725)
T ss_dssp HCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCC---SS
T ss_pred hccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEecc---cc
Confidence 1234566677888875 4 78998899887 5999999999999874 35
Q ss_pred CCCchhHHHHHHcCCeEEEeeeCC
Q 015058 375 LDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 375 ~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
|++|..++||||||+|||+|+++|
T Consensus 529 EgfGl~~LEAmA~G~PvI~s~~gG 552 (725)
T 3nb0_A 529 EPWGYTPAECTVMGVPSITTNVSG 552 (725)
T ss_dssp BSSCHHHHHHHHTTCCEEEETTBH
T ss_pred CCCCHHHHHHHHcCCCEEEeCCCC
Confidence 789999999999999999999987
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=9.6e-20 Score=182.72 Aligned_cols=192 Identities=15% Similarity=0.046 Sum_probs=135.1
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~ 179 (414)
.+||+||++.+..++. ++ ....+ |+++..+.+. ..+ +++++++.+|.++++|+.+++
T Consensus 110 ~~pDiv~~~~~~~~~~-~~----~~~~~-p~~~~~~~~~---------~~~--------~~~~~~~~~d~ii~~S~~~~~ 166 (374)
T 2xci_A 110 SKPKALIVVEREFWPS-LI----IFTKV-PKILVNAYAK---------GSL--------IEKILSKKFDLIIMRTQEDVE 166 (374)
T ss_dssp HCCSEEEEESCCCCHH-HH----HHCCS-CEEEEEECCC---------CCH--------HHHHHHTTCSEEEESCHHHHH
T ss_pred hCCCEEEEECccCcHH-HH----HHHhC-CEEEEEeecC---------chH--------HHHHHHHhCCEEEECCHHHHH
Confidence 6899999875433332 11 22233 7765433321 111 345667899999999999999
Q ss_pred HHHHhhCCc-EEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCC
Q 015058 180 ELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRP 258 (414)
Q Consensus 180 ~l~~~~gi~-i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 258 (414)
.+.+. |++ +.+++|+ .|.+.... + + .+. ++
T Consensus 167 ~l~~~-g~~ki~vi~n~---~f~~~~~~-----~-~-------------------------------------~l~--~~ 197 (374)
T 2xci_A 167 KFKTF-GAKRVFSCGNL---KFICQKGK-----G-I-------------------------------------KLK--GE 197 (374)
T ss_dssp HHHTT-TCCSEEECCCG---GGCCCCCS-----C-C-------------------------------------CCS--SC
T ss_pred HHHHc-CCCeEEEcCCC---ccCCCcCh-----h-h-------------------------------------hhc--CC
Confidence 99875 775 8889887 23221100 0 0 011 23
Q ss_pred eEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCCh-HHHHHHHHH
Q 015058 259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYEEKIRR 337 (414)
Q Consensus 259 ~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~-e~l~~~i~~ 337 (414)
+++++|++ .||++.|++|++.+++ .+|+++|+|+|+||++ +++++++++
T Consensus 198 -vi~~~~~~--~k~~~~ll~A~~~l~~---------------------------~~p~~~lvivG~g~~~~~~l~~~~~~ 247 (374)
T 2xci_A 198 -FIVAGSIH--TGEVEIILKAFKEIKK---------------------------TYSSLKLILVPRHIENAKIFEKKARD 247 (374)
T ss_dssp -EEEEEEEC--GGGHHHHHHHHHHHHT---------------------------TCTTCEEEEEESSGGGHHHHHHHHHH
T ss_pred -EEEEEeCC--CchHHHHHHHHHHHHh---------------------------hCCCcEEEEECCCHHHHHHHHHHHHH
Confidence 56666653 5899999999999875 4789999999999987 689999999
Q ss_pred cCCC---------cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe-eeCC
Q 015058 338 LRLK---------RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL-WTCS 398 (414)
Q Consensus 338 l~l~---------~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s-~~~~ 398 (414)
+|++ +|.|.| +.+|++.+|++||++++++ +..++++..++||||||+|||++ ++++
T Consensus 248 ~gl~~~~~~~~~~~v~~~~---~~~dl~~~y~~aDv~vl~s--s~~e~gg~~~lEAmA~G~PVI~~~~~~~ 313 (374)
T 2xci_A 248 FGFKTSFFENLEGDVILVD---RFGILKELYPVGKIAIVGG--TFVNIGGHNLLEPTCWGIPVIYGPYTHK 313 (374)
T ss_dssp TTCCEEETTCCCSSEEECC---SSSCHHHHGGGEEEEEECS--SSSSSCCCCCHHHHTTTCCEEECSCCTT
T ss_pred CCCceEEecCCCCcEEEEC---CHHHHHHHHHhCCEEEECC--cccCCCCcCHHHHHHhCCCEEECCCccC
Confidence 9986 477776 5799999999999988652 22234578899999999999985 4444
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-19 Score=181.37 Aligned_cols=196 Identities=11% Similarity=0.005 Sum_probs=134.9
Q ss_pred hcCCCcEEEEeCCCCchHHHHHHHHHhh--cCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCH
Q 015058 98 KIASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQ 175 (414)
Q Consensus 98 k~~~~Dvvh~~~pp~~~~~~~~~la~~~--~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~ 175 (414)
+..++|+|++++||.....+.+.+++++ +++|+|+.+||+. ++. +.... ...+.|+++++.||.|+|+|+
T Consensus 71 ~~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~-pl~---~~~~~----~~~~~E~~~y~~aD~Ii~~S~ 142 (339)
T 3rhz_A 71 GLRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVV-PLM---FSGNF----YLMDRTIAYYNKADVVVAPSQ 142 (339)
T ss_dssp TCCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCH-HHH---CGGGG----GGHHHHHHHHTTCSEEEESCH
T ss_pred cCCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccH-Hhh---Cccch----hhHHHHHHHHHHCCEEEECCH
Confidence 4579999999999643333334444443 3899999999984 332 21111 223479999999999999999
Q ss_pred HHHHHHHHhhCCc---EEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccc
Q 015058 176 AMQHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF 252 (414)
Q Consensus 176 ~~~~~l~~~~gi~---i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (414)
.+++.+.++ |++ +.++++++.. .+.+. .
T Consensus 143 ~~~~~l~~~-G~~~~ki~~~~~~~~~--~~~~~----------------------------------------------~ 173 (339)
T 3rhz_A 143 KMIDKLRDF-GMNVSKTVVQGMWDHP--TQAPM----------------------------------------------F 173 (339)
T ss_dssp HHHHHHHHT-TCCCSEEEECCSCCCC--CCCCC----------------------------------------------C
T ss_pred HHHHHHHHc-CCCcCceeecCCCCcc--Ccccc----------------------------------------------c
Confidence 999999875 876 4444444321 01100 0
Q ss_pred cCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHH
Q 015058 253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (414)
Q Consensus 253 l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~ 332 (414)
.+.++ ..|+|+|++.+.+. +.+ ..++++|+|+|+|+++
T Consensus 174 ~~~~~-~~i~yaG~l~k~~~----------L~~---------------------------l~~~~~f~ivG~G~~~---- 211 (339)
T 3rhz_A 174 PAGLK-REIHFPGNPERFSF----------VKE---------------------------WKYDIPLKVYTWQNVE---- 211 (339)
T ss_dssp CCEEE-EEEEECSCTTTCGG----------GGG---------------------------CCCSSCEEEEESCCCC----
T ss_pred ccCCC-cEEEEeCCcchhhH----------HHh---------------------------CCCCCeEEEEeCCccc----
Confidence 01122 48999999985221 111 1257999999999985
Q ss_pred HHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCC----CCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 333 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS----GLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 333 ~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~----g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
+ +.||+|+| ++|.++++.+|+++|++++...... ....|+|++||||||+|||+++.++.
T Consensus 212 ----~--l~nV~f~G-~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~ 275 (339)
T 3rhz_A 212 ----L--PQNVHKIN-YRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIAN 275 (339)
T ss_dssp ----C--CTTEEEEE-CCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTT
T ss_pred ----C--cCCEEEeC-CCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhH
Confidence 2 34999997 9999999999999999886411100 13479999999999999999886653
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=6.7e-19 Score=183.58 Aligned_cols=224 Identities=9% Similarity=-0.008 Sum_probs=145.3
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhh-cCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~-~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
..+|+||+|++ ....++.+++.. .++|+++.+|....+. .. +..-.+...+.+ .+ -.+|.+...+....
T Consensus 122 ~~~DiV~vHdy---hl~~l~~~lr~~~~~~~i~~~~H~pfp~~-~~-~~~lp~~~~il~----~l-l~~d~i~f~~~~~~ 191 (482)
T 1uqt_A 122 QDDDIIWIHDY---HLLPFAHELRKRGVNNRIGFFLHIPFPTP-EI-FNALPTYDTLLE----QL-CDYDLLGFQTENDR 191 (482)
T ss_dssp CTTCEEEEESG---GGTTHHHHHHHTTCCSCEEEECCSCCCCH-HH-HTTSTTHHHHHH----HH-TTSSEEEESSHHHH
T ss_pred CCCCEEEEECc---hHHHHHHHHHHhCCCCcEEEEEcCCCCCH-HH-HhhCccHHHHHH----hh-hccCeEEEECHHHH
Confidence 56799999986 334445555544 4799999999742111 00 100111111111 11 25677777776655
Q ss_pred HHHHH-----------------hhCC--cEEEecCC-CCCCcCCCCh----HHHHHHHHHhhhhccCCCCccccccCCCC
Q 015058 179 HELAQ-----------------NWGI--KATVLYDQ-PPEFFHPTSL----EEKHELFCRLNKILHQPLGVQDCVSNGME 234 (414)
Q Consensus 179 ~~l~~-----------------~~gi--~i~vI~n~-~~~~f~p~~~----~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 234 (414)
+.+.. .+|. ++.++||| |++.|.+... .++.+++++++
T Consensus 192 ~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~~------------------ 253 (482)
T 1uqt_A 192 LAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELK------------------ 253 (482)
T ss_dssp HHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTT------------------
T ss_pred HHHHHHHHHHhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHhC------------------
Confidence 54332 1232 27899999 7777754210 01344554431
Q ss_pred CCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCC
Q 015058 235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY 314 (414)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (414)
++ .+|+++||+.+.||++.+|+|++.+.++.+ + ..
T Consensus 254 ---------------------~~-~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p-------------------~----~~ 288 (482)
T 1uqt_A 254 ---------------------NV-QNIFSVERLDYSKGLPERFLAYEALLEKYP-------------------Q----HH 288 (482)
T ss_dssp ---------------------TC-EEEEEECCBCGGGCHHHHHHHHHHHHHHCG-------------------G----GT
T ss_pred ---------------------CC-EEEEEEeCCcccCCHHHHHHHHHHHHHhCc-------------------c----cc
Confidence 34 489999999999999999999999876411 0 01
Q ss_pred CcEEEEEEcC-----CCCh----HHHHHHHHHcC-------CCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCc
Q 015058 315 PRLLFIITGK-----GPDK----ESYEEKIRRLR-------LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLP 378 (414)
Q Consensus 315 p~i~liI~G~-----G~~~----e~l~~~i~~l~-------l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP 378 (414)
.++.|+++|. |++. +++++++++++ ...|.|+++.++++|++.+|++||+||+++ ..+|||
T Consensus 289 ~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS---~~EGfg 365 (482)
T 1uqt_A 289 GKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTP---LRDGMN 365 (482)
T ss_dssp TTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECC---SSBSCC
T ss_pred CcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECC---CcccCC
Confidence 2488999984 4433 34444554432 235887766999999999999999999763 357899
Q ss_pred hhHHHHHHcCC-----eEEEeeeCCc
Q 015058 379 MKVCYCWYSRY-----SLKLLWTCSV 399 (414)
Q Consensus 379 ~kl~Eama~G~-----Pvi~s~~~~~ 399 (414)
.+++||||||+ |+|+|+.+|.
T Consensus 366 Lv~lEAmA~g~~~~~gpvV~S~~~G~ 391 (482)
T 1uqt_A 366 LVAKEYVAAQDPANPGVLVLSQFAGA 391 (482)
T ss_dssp HHHHHHHHHSCTTSCCEEEEETTBGG
T ss_pred chHHHHHHhCCCCCCCCEEEECCCCC
Confidence 99999999998 9999997764
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.82 E-value=1e-19 Score=163.54 Aligned_cols=106 Identities=16% Similarity=0.063 Sum_probs=96.2
Q ss_pred EEEEeccCC-CCCChHHHHHHHHHhH--HHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCC--ChHHHHHH
Q 015058 260 LVVSSTSWT-PDEDFGILLEAALMYD--RRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEK 334 (414)
Q Consensus 260 ~i~~vgrl~-~~Kg~~~LleA~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~--~~e~l~~~ 334 (414)
+|+++|++. +.||++.+++|++.+. + ..|+++|+|+|+|+ ..+++++.
T Consensus 38 ~i~~~G~~~~~~K~~~~li~a~~~l~~~~---------------------------~~~~~~l~i~G~~~~~~~~~l~~~ 90 (200)
T 2bfw_A 38 TFMFIGRFDRGQKGVDVLLKAIEILSSKK---------------------------EFQEMRFIIIGKGDPELEGWARSL 90 (200)
T ss_dssp EEEEESCBCSSSSCHHHHHHHHHHHTTSG---------------------------GGGGEEEEEECCBCHHHHHHHHHH
T ss_pred EEEEeeccccccCCHHHHHHHHHHHHhhc---------------------------cCCCeEEEEECCCChHHHHHHHHH
Confidence 889999999 9999999999999985 4 25789999999999 88999999
Q ss_pred HHHcCCCcEEE-ecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 335 IRRLRLKRVAF-RTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 335 i~~l~l~~V~f-~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
+++++ +|+| .| +++.++++.+|++||++|+++. .+++|++++|||+||+|||+++++|
T Consensus 91 ~~~~~--~v~~~~g-~~~~~~~~~~~~~ad~~l~ps~---~e~~~~~~~Ea~a~G~PvI~~~~~~ 149 (200)
T 2bfw_A 91 EEKHG--NVKVITE-MLSREFVRELYGSVDFVIIPSY---FEPFGLVALEAMCLGAIPIASAVGG 149 (200)
T ss_dssp HHHCT--TEEEECS-CCCHHHHHHHHTTCSEEEECCS---CCSSCHHHHHHHHTTCEEEEESCHH
T ss_pred HHhcC--CEEEEec-cCCHHHHHHHHHHCCEEEECCC---CCCccHHHHHHHHCCCCEEEeCCCC
Confidence 99988 8999 97 9999999999999999998643 4689999999999999999998863
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.80 E-value=3e-19 Score=156.21 Aligned_cols=104 Identities=13% Similarity=0.218 Sum_probs=94.9
Q ss_pred CeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHHH
Q 015058 258 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRR 337 (414)
Q Consensus 258 ~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~ 337 (414)
|++|+++||+.++||++.+++|+..+++ .|+++|+|+|+|++++++++++++
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~----------------------------~~~~~l~i~G~g~~~~~~~~~~~~ 53 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKY----------------------------KQDIVLLLKGKGPDEKKIKLLAQK 53 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTT----------------------------GGGEEEEEECCSTTHHHHHHHHHH
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhcc----------------------------CCCeEEEEEeCCccHHHHHHHHHH
Confidence 4689999999999999999999999853 478999999999999999999999
Q ss_pred cCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCC-eEEEee
Q 015058 338 LRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRY-SLKLLW 395 (414)
Q Consensus 338 l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~-Pvi~s~ 395 (414)
+++ +|.| | ++++++++.+|++||++|+|+. .+++|++++|||+||+ |||+++
T Consensus 54 ~~~-~v~~-g-~~~~~~~~~~~~~adv~v~ps~---~e~~~~~~~Eama~G~vPvi~~~ 106 (166)
T 3qhp_A 54 LGV-KAEF-G-FVNSNELLEILKTCTLYVHAAN---VESEAIACLEAISVGIVPVIANS 106 (166)
T ss_dssp HTC-EEEC-C-CCCHHHHHHHHTTCSEEEECCC---SCCCCHHHHHHHHTTCCEEEECC
T ss_pred cCC-eEEE-e-ecCHHHHHHHHHhCCEEEECCc---ccCccHHHHHHHhcCCCcEEeeC
Confidence 999 8999 7 9999999999999999998643 5789999999999998 999954
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.74 E-value=3.6e-18 Score=152.60 Aligned_cols=112 Identities=15% Similarity=0.037 Sum_probs=99.7
Q ss_pred cccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHH
Q 015058 251 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 330 (414)
Q Consensus 251 ~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~ 330 (414)
..++++++ +|+|+|++.+.||++.+++|++.+ |+++|+|+|+|+..++
T Consensus 17 ~~~~~~~~-~i~~~G~~~~~Kg~~~li~a~~~l-------------------------------~~~~l~i~G~~~~~~~ 64 (177)
T 2f9f_A 17 FKFKCYGD-FWLSVNRIYPEKRIELQLEVFKKL-------------------------------QDEKLYIVGWFSKGDH 64 (177)
T ss_dssp CCCCCCCS-CEEEECCSSGGGTHHHHHHHHHHC-------------------------------TTSCEEEEBCCCTTST
T ss_pred cccCCCCC-EEEEEeccccccCHHHHHHHHHhC-------------------------------CCcEEEEEecCccHHH
Confidence 35666775 899999999999999999999875 3689999999999999
Q ss_pred HHHHHH--HcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 331 YEEKIR--RLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 331 l~~~i~--~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
+++.++ ++++. +|.|.| +++.++++.+|++||++|+++. .+++|.+++|||+||+|||++++++
T Consensus 65 l~~~~~~~~~~l~~~v~~~g-~~~~~e~~~~~~~adi~v~ps~---~e~~~~~~~Eama~G~PvI~~~~~~ 131 (177)
T 2f9f_A 65 AERYARKIMKIAPDNVKFLG-SVSEEELIDLYSRCKGLLCTAK---DEDFGLTPIEAMASGKPVIAVNEGG 131 (177)
T ss_dssp HHHHHHHHHHHSCTTEEEEE-SCCHHHHHHHHHHCSEEEECCS---SCCSCHHHHHHHHTTCCEEEESSHH
T ss_pred HHHHHHhhhcccCCcEEEeC-CCCHHHHHHHHHhCCEEEeCCC---cCCCChHHHHHHHcCCcEEEeCCCC
Confidence 999999 88898 999997 9999999999999999997633 5678999999999999999998764
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.7e-16 Score=159.05 Aligned_cols=291 Identities=13% Similarity=0.059 Sum_probs=167.2
Q ss_pred CCEEEEEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCCCC-CcccccCCCeE-EEEeecCCCCCCCCCCchHHHHHH
Q 015058 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKP-HAAILEHPSIH-IHTMTQWPTIPRGLPKVLKPVLLL 81 (414)
Q Consensus 4 ~~~~~v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~-~~~~~~~~~i~-i~~v~~~~~~~~~~~~~~~~~~~l 81 (414)
++++++++.+ -.....+...+..|.++.++++.++..++... .....+.-+++ -+.+. .... .. ......
T Consensus 25 m~ki~~v~Gt-r~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~i~~~~~l~--~~~~--~~---~~~~~~ 96 (396)
T 3dzc_A 25 MKKVLIVFGT-RPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLN--IMEP--GQ---TLNGVT 96 (396)
T ss_dssp CEEEEEEECS-HHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTTCCCSEECC--CCCT--TC---CHHHHH
T ss_pred CCeEEEEEec-cHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcCCCCceeee--cCCC--CC---CHHHHH
Confidence 4445554433 33334455566777764478887776654321 11122223331 12333 1000 11 111122
Q ss_pred HHHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCC-cHHHHHHHHHH
Q 015058 82 LKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRR-SHFVSIYRWIE 160 (414)
Q Consensus 82 ~k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~-~~~~~i~~~~E 160 (414)
.+.+.++..+ + +..+||+||++..+ ...+.+.++++..++|++...++.. + +... .+...+.+
T Consensus 97 ~~~~~~l~~~----l-~~~kPDvVi~~g~~--~~~~~~~~aa~~~~IPv~h~~ag~r-s-----~~~~~~~~~~~~r--- 160 (396)
T 3dzc_A 97 SKILLGMQQV----L-SSEQPDVVLVHGDT--ATTFAASLAAYYQQIPVGHVEAGLR-T-----GNIYSPWPEEGNR--- 160 (396)
T ss_dssp HHHHHHHHHH----H-HHHCCSEEEEETTS--HHHHHHHHHHHTTTCCEEEETCCCC-C-----SCTTSSTTHHHHH---
T ss_pred HHHHHHHHHH----H-HhcCCCEEEEECCc--hhHHHHHHHHHHhCCCEEEEECCcc-c-----cccccCCcHHHHH---
Confidence 3333332222 2 23799999999862 3335556777888999764333221 0 1111 11122222
Q ss_pred HHHhccCCEEEEeCHHHHHHHHHhhCCc---EEEecCC--CCCCcCCCCh----HHHHHHHHHhhhhccCCCCccccccC
Q 015058 161 KYYGKMANGCLCVTQAMQHELAQNWGIK---ATVLYDQ--PPEFFHPTSL----EEKHELFCRLNKILHQPLGVQDCVSN 231 (414)
Q Consensus 161 k~~~k~ad~ii~vS~~~~~~l~~~~gi~---i~vI~n~--~~~~f~p~~~----~~~~~l~~~l~~~~~~~~~~~~~~~~ 231 (414)
+.+.+.+|.++|.|+..++.+.+. |++ +.++.|. |...+.+... ..+.++++++
T Consensus 161 ~~~~~~a~~~~~~se~~~~~l~~~-G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~l---------------- 223 (396)
T 3dzc_A 161 KLTAALTQYHFAPTDTSRANLLQE-NYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQF---------------- 223 (396)
T ss_dssp HHHHHTCSEEEESSHHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTC----------------
T ss_pred HHHHHhcCEEECCCHHHHHHHHHc-CCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHh----------------
Confidence 234688999999999999999875 876 7888775 3211111100 0023444332
Q ss_pred CCCCCCCccceeeeccccccc-cCCCCCeEEEEeccCC-CCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCC
Q 015058 232 GMEGQKADETIFTSLAGIDVF-LKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDG 309 (414)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~i~~vgrl~-~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (414)
+ ++++++.++++.+|.. ..|+++.+++|++.+.++
T Consensus 224 --------------------g~l~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~----------------------- 260 (396)
T 3dzc_A 224 --------------------PMLDASKKLILVTGHRRESFGGGFERICQALITTAEQ----------------------- 260 (396)
T ss_dssp --------------------TTCCTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHH-----------------------
T ss_pred --------------------CccCCCCCEEEEEECCcccchhHHHHHHHHHHHHHHh-----------------------
Confidence 3 2345555666776643 347899999999998763
Q ss_pred ccCCCCcEEEEEE-cCCCChHHHHHHHHH-cCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHH
Q 015058 310 KQYLYPRLLFIIT-GKGPDKESYEEKIRR-LRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWY 386 (414)
Q Consensus 310 ~~~~~p~i~liI~-G~G~~~e~l~~~i~~-l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama 386 (414)
+|++++++. |.+|. +++.+++ ++.. +|.|.+ ++..+|+..+|++||++|+.+ | + ...|||+
T Consensus 261 ----~~~~~~v~~~g~~~~---~~~~l~~~~~~~~~v~~~~-~lg~~~~~~l~~~ad~vv~~S----G-g---~~~EA~a 324 (396)
T 3dzc_A 261 ----HPECQILYPVHLNPN---VREPVNKLLKGVSNIVLIE-PQQYLPFVYLMDRAHIILTDS----G-G---IQEEAPS 324 (396)
T ss_dssp ----CTTEEEEEECCBCHH---HHHHHHHHTTTCTTEEEEC-CCCHHHHHHHHHHCSEEEESC----S-G---GGTTGGG
T ss_pred ----CCCceEEEEeCCChH---HHHHHHHHHcCCCCEEEeC-CCCHHHHHHHHHhcCEEEECC----c-c---HHHHHHH
Confidence 688999885 66642 3334444 2444 899986 778889999999999998542 3 2 2389999
Q ss_pred cCCeEEEe
Q 015058 387 SRYSLKLL 394 (414)
Q Consensus 387 ~G~Pvi~s 394 (414)
+|+|+|++
T Consensus 325 ~G~PvV~~ 332 (396)
T 3dzc_A 325 LGKPVLVM 332 (396)
T ss_dssp GTCCEEEC
T ss_pred cCCCEEEc
Confidence 99999997
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=5.6e-16 Score=162.18 Aligned_cols=217 Identities=11% Similarity=-0.026 Sum_probs=144.0
Q ss_pred CCcEEEEeCCCCchHHHHHHHHHhh-cCCeEEEEEcCcchhhhhhccCCCcH-HHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 101 SPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSH-FVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 101 ~~Dvvh~~~pp~~~~~~~~~la~~~-~~~~~Iv~~H~~~~~l~~~~~~~~~~-~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
.-|+|.+|++ +.+++..+++.. .+.++..-+|-..++.. + +..-.. ++ ..+-+.+ -.+|.|...++...
T Consensus 149 ~~D~VwVhDY---hL~llp~~lR~~~~~~~igfFlHiPfPs~e-~-f~~Lp~~~r---~ell~gl-l~~DligF~t~~y~ 219 (496)
T 3t5t_A 149 ADPVYLVHDY---QLVGVPALLREQRPDAPILLFVHIPWPSAD-Y-WRILPKEIR---TGILHGM-LPATTIGFFADRWC 219 (496)
T ss_dssp SSCEEEEESG---GGTTHHHHHHHHCTTSCEEEECCSCCCCHH-H-HTTSCHHHH---HHHHHHH-TTSSEEEESSHHHH
T ss_pred CCCEEEEeCc---cHhHHHHHHHhhCCCCeEEEEEcCCCCCHH-H-HhhCcHhHH---HHHHHHH-HhCCEEEEecHHHH
Confidence 4689999997 444455555543 46777777776421111 0 111111 11 1222233 47999999999887
Q ss_pred HHHHH----hh-C--------------C--cEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCC
Q 015058 179 HELAQ----NW-G--------------I--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQ 236 (414)
Q Consensus 179 ~~l~~----~~-g--------------i--~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 236 (414)
+.+.+ .. | . ++.++|+| |++.|.+...+.+.+++++++
T Consensus 220 ~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~-------------------- 279 (496)
T 3t5t_A 220 RNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWAD-------------------- 279 (496)
T ss_dssp HHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHT--------------------
T ss_pred HHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhC--------------------
Confidence 76332 12 2 1 26789999 888897764222234554432
Q ss_pred CCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCC-
Q 015058 237 KADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP- 315 (414)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p- 315 (414)
++ .+|+++||+.+.||++.+|+|+ .+.++ +|
T Consensus 280 -------------------~~-~lIl~VgRLd~~KGi~~lL~Af-~ll~~---------------------------~P~ 311 (496)
T 3t5t_A 280 -------------------GH-RLVVHSGRTDPIKNAERAVRAF-VLAAR---------------------------GGG 311 (496)
T ss_dssp -------------------TS-EEEEEEEESSGGGCHHHHHHHH-HHHHH---------------------------TSS
T ss_pred -------------------Cc-eEEEEcccCccccCHHHHHHHH-HHHHh---------------------------Ccc
Confidence 34 3899999999999999999999 76653 44
Q ss_pred --cEEEEEEc-----CCCChHHHHHHHH----HcCC----CcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchh
Q 015058 316 --RLLFIITG-----KGPDKESYEEKIR----RLRL----KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMK 380 (414)
Q Consensus 316 --~i~liI~G-----~G~~~e~l~~~i~----~l~l----~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~k 380 (414)
++.|+++| +|++.+++++.++ +.+. ..|.|+| .++.++++.+|++||+||+++ ..+||+..
T Consensus 312 ~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g-~v~~~el~aly~~ADv~vv~S---lrEGfgLv 387 (496)
T 3t5t_A 312 LEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDN-DNDVNHTIACFRRADLLIFNS---TVDGQNLS 387 (496)
T ss_dssp CTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEE-CCCHHHHHHHHHHCSEEEECC---SSBSCCSH
T ss_pred cceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeC-CCCHHHHHHHHHhccEEEECc---ccccCChh
Confidence 46788775 5555545554444 4332 2699997 889999999999999999753 35788999
Q ss_pred HHHHHHcC---CeEEEeeeCC
Q 015058 381 VCYCWYSR---YSLKLLWTCS 398 (414)
Q Consensus 381 l~Eama~G---~Pvi~s~~~~ 398 (414)
.+|||||| .|+|+|...|
T Consensus 388 ~~EamA~~~~~g~lVlSe~aG 408 (496)
T 3t5t_A 388 TFEAPLVNERDADVILSETCG 408 (496)
T ss_dssp HHHHHHHCSSCCEEEEETTBT
T ss_pred HHHHHHhCCCCCCEEEeCCCC
Confidence 99999997 8999999887
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=4e-15 Score=147.66 Aligned_cols=270 Identities=11% Similarity=-0.045 Sum_probs=152.4
Q ss_pred HHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecC--C---------CCCCCCC--CchHHHHHHHHHHH
Q 015058 20 RMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQW--P---------TIPRGLP--KVLKPVLLLLKPLI 86 (414)
Q Consensus 20 r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~--~---------~~~~~~~--~~~~~~~~l~k~l~ 86 (414)
++...+..|.++ ||+|+++|... ........+++++.++.. . ......+ .....+..+...+.
T Consensus 36 ~~~~la~~L~~~-GheV~v~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (412)
T 3otg_A 36 PLLPLATAARAA-GHEVTFATGEG---FAGTLRKLGFEPVATGMPVFDGFLAALRIRFDTDSPEGLTPEQLSELPQIVFG 111 (412)
T ss_dssp GGHHHHHHHHHT-TCEEEEEECGG---GHHHHHHTTCEEEECCCCHHHHHHHHHHHHHSCSCCTTCCHHHHTTSHHHHHH
T ss_pred HHHHHHHHHHHC-CCEEEEEccHH---HHHHHHhcCCceeecCcccccchhhhhhhhhcccCCccCChhHhhHHHHHHHh
Confidence 344677888886 99999999653 233344578899888720 0 0000000 00000000111111
Q ss_pred H-----HHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHH
Q 015058 87 Q-----FFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEK 161 (414)
Q Consensus 87 ~-----~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek 161 (414)
. ....+..++ +..+||+||++.. . +.+.++++..|+|+|++.|+... ......++.+++.+
T Consensus 112 ~~~~~~~~~~l~~~l-~~~~pDvVv~~~~---~--~~~~~aa~~~giP~v~~~~~~~~--------~~~~~~~~~~~~~~ 177 (412)
T 3otg_A 112 RVIPQRVFDELQPVI-ERLRPDLVVQEIS---N--YGAGLAALKAGIPTICHGVGRDT--------PDDLTRSIEEEVRG 177 (412)
T ss_dssp THHHHHHHHHHHHHH-HHHCCSEEEEETT---C--HHHHHHHHHHTCCEEEECCSCCC--------CSHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHH-HhcCCCEEEECch---h--hHHHHHHHHcCCCEEEecccccC--------chhhhHHHHHHHHH
Confidence 1 011112222 2369999988853 1 22456677789999998887632 11122333344444
Q ss_pred HHh------------ccCCEEEEeCHHHHHHHHHhhCCc-EEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCcccc
Q 015058 162 YYG------------KMANGCLCVTQAMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDC 228 (414)
Q Consensus 162 ~~~------------k~ad~ii~vS~~~~~~l~~~~gi~-i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~ 228 (414)
+.. ..+|.+++.++...+...+.+... ..+. +.+..... + +.++.
T Consensus 178 ~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~--~-~~~~~------------ 235 (412)
T 3otg_A 178 LAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARPRRHELR-------PVPFAEQG--D-LPAWL------------ 235 (412)
T ss_dssp HHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHTCTTEEECC-------CCCCCCCC--C-CCGGG------------
T ss_pred HHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccCCCCcceee-------ccCCCCCC--C-CCCcc------------
Confidence 433 357888888877666555543322 1111 11111000 0 00000
Q ss_pred ccCCCCCCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcC
Q 015058 229 VSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISD 308 (414)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (414)
....++++.++++.|++. .++.+.+.++++.+.+
T Consensus 236 ----------------------~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~----------------------- 269 (412)
T 3otg_A 236 ----------------------SSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAG----------------------- 269 (412)
T ss_dssp ----------------------GGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHT-----------------------
T ss_pred ----------------------ccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHc-----------------------
Confidence 011345667889999997 7788888888877753
Q ss_pred CccCCCCcEEEEEEc-CCCChHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHH
Q 015058 309 GKQYLYPRLLFIITG-KGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWY 386 (414)
Q Consensus 309 ~~~~~~p~i~liI~G-~G~~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama 386 (414)
. +.++++++ +++.+++++ ++. +|.|.| ++ +++.+|+.||++|+. + -++.++|||+
T Consensus 270 -----~-~~~~~~~~g~~~~~~~l~------~~~~~v~~~~-~~---~~~~~l~~ad~~v~~----~---g~~t~~Ea~a 326 (412)
T 3otg_A 270 -----L-DADVLVASGPSLDVSGLG------EVPANVRLES-WV---PQAALLPHVDLVVHH----G---GSGTTLGALG 326 (412)
T ss_dssp -----S-SSEEEEECCSSCCCTTCC------CCCTTEEEES-CC---CHHHHGGGCSEEEES----C---CHHHHHHHHH
T ss_pred -----C-CCEEEEEECCCCChhhhc------cCCCcEEEeC-CC---CHHHHHhcCcEEEEC----C---chHHHHHHHH
Confidence 2 35665554 444355443 244 899997 76 599999999999953 1 2578999999
Q ss_pred cCCeEEEeeeCC
Q 015058 387 SRYSLKLLWTCS 398 (414)
Q Consensus 387 ~G~Pvi~s~~~~ 398 (414)
+|+|+|+....+
T Consensus 327 ~G~P~v~~p~~~ 338 (412)
T 3otg_A 327 AGVPQLSFPWAG 338 (412)
T ss_dssp HTCCEEECCCST
T ss_pred hCCCEEecCCch
Confidence 999999976654
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.64 E-value=3.8e-15 Score=151.24 Aligned_cols=205 Identities=16% Similarity=0.067 Sum_probs=132.9
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCC-cHHHHHHHHHHHHHhccCCEEEEeCHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRR-SHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~-~~~~~i~~~~Ek~~~k~ad~ii~vS~~~ 177 (414)
..+||+||++..+ ...+.+.++++..++|++....+.. ++... .+... ...+++.+.+|.+++.|+..
T Consensus 112 ~~kPD~Vi~~gd~--~~~l~~~laA~~~~IPv~h~~aglr------s~~~~~~~p~~---~~r~~~~~~a~~~~~~se~~ 180 (403)
T 3ot5_A 112 AENPDIVLVHGDT--TTSFAAGLATFYQQKMLGHVEAGLR------TWNKYSPFPEE---MNRQLTGVMADIHFSPTKQA 180 (403)
T ss_dssp HHCCSEEEEETTC--HHHHHHHHHHHHTTCEEEEESCCCC------CSCTTSSTTHH---HHHHHHHHHCSEEEESSHHH
T ss_pred HcCCCEEEEECCc--hhHHHHHHHHHHhCCCEEEEECCcc------ccccccCCcHH---HHHHHHHHhcCEEECCCHHH
Confidence 3799999999762 2334455677788999754322220 11111 11111 22345667899999999999
Q ss_pred HHHHHHhhCCc---EEEecCC--CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccc
Q 015058 178 QHELAQNWGIK---ATVLYDQ--PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF 252 (414)
Q Consensus 178 ~~~l~~~~gi~---i~vI~n~--~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (414)
++.+.+. |++ +.++.|. |...+.+... .+.+.+++
T Consensus 181 ~~~l~~~-Gi~~~~i~vvGn~~~D~~~~~~~~~-~~~~~~~~-------------------------------------- 220 (403)
T 3ot5_A 181 KENLLAE-GKDPATIFVTGNTAIDALKTTVQKD-YHHPILEN-------------------------------------- 220 (403)
T ss_dssp HHHHHHT-TCCGGGEEECCCHHHHHHHHHSCTT-CCCHHHHS--------------------------------------
T ss_pred HHHHHHc-CCCcccEEEeCCchHHHHHhhhhhh-cchHHHHh--------------------------------------
Confidence 9999875 886 7777765 3222212110 01122211
Q ss_pred cCCCCCeEEEEeccCCC-CCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEE-cCCCChHH
Q 015058 253 LKPNRPALVVSSTSWTP-DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGPDKES 330 (414)
Q Consensus 253 l~~~~~~~i~~vgrl~~-~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~-G~G~~~e~ 330 (414)
+ ++++.++++.+|... .|+++.+++|+..+.++ +|++++++. |.++ .
T Consensus 221 l-~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~---------------------------~~~~~~v~~~~~~~---~ 269 (403)
T 3ot5_A 221 L-GDNRLILMTAHRRENLGEPMQGMFEAVREIVES---------------------------REDTELVYPMHLNP---A 269 (403)
T ss_dssp C-TTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHH---------------------------CTTEEEEEECCSCH---H
T ss_pred c-cCCCEEEEEeCcccccCcHHHHHHHHHHHHHHh---------------------------CCCceEEEecCCCH---H
Confidence 2 244557777877643 46789999999998763 688999886 5554 2
Q ss_pred HHHHHHH-cCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe
Q 015058 331 YEEKIRR-LRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL 394 (414)
Q Consensus 331 l~~~i~~-l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s 394 (414)
+++.+++ ++.. +|.+.+ ++..+|+..+|++||++|+. | | ....||+++|+|+|++
T Consensus 270 ~~~~l~~~~~~~~~v~l~~-~l~~~~~~~l~~~ad~vv~~---S-G----g~~~EA~a~g~PvV~~ 326 (403)
T 3ot5_A 270 VREKAMAILGGHERIHLIE-PLDAIDFHNFLRKSYLVFTD---S-G----GVQEEAPGMGVPVLVL 326 (403)
T ss_dssp HHHHHHHHHTTCTTEEEEC-CCCHHHHHHHHHHEEEEEEC---C-H----HHHHHGGGTTCCEEEC
T ss_pred HHHHHHHHhCCCCCEEEeC-CCCHHHHHHHHHhcCEEEEC---C-c----cHHHHHHHhCCCEEEe
Confidence 3344444 3443 899997 88888999999999998853 2 2 2337999999999998
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.8e-14 Score=142.52 Aligned_cols=263 Identities=15% Similarity=0.067 Sum_probs=151.5
Q ss_pred ChHHHH----HHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 015058 18 SPRMQY----QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLW 93 (414)
Q Consensus 18 ~~r~~~----~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~ 93 (414)
.+|.-+ .|+.|.++ ||+|.++|.... ...+.....+++++.++ ....++.. ....+..+++.+..+... +
T Consensus 12 TgGHi~palala~~L~~~-g~~V~~vg~~~g-~e~~~v~~~g~~~~~i~--~~~~~~~~-~~~~~~~~~~~~~~~~~~-~ 85 (365)
T 3s2u_A 12 TGGHVFPALACAREFQAR-GYAVHWLGTPRG-IENDLVPKAGLPLHLIQ--VSGLRGKG-LKSLVKAPLELLKSLFQA-L 85 (365)
T ss_dssp SHHHHHHHHHHHHHHHHT-TCEEEEEECSSS-THHHHTGGGTCCEEECC-----------------CHHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEECCch-HhhchhhhcCCcEEEEE--CCCcCCCC-HHHHHHHHHHHHHHHHHH-H
Confidence 355544 55666665 999999985532 12334445678888877 22211110 111122222222222111 2
Q ss_pred HHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEe
Q 015058 94 FLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCV 173 (414)
Q Consensus 94 ~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~v 173 (414)
+++ +..+||+|+.... ...+.+.+++++.|+|++++..|... | . ..+++.+.||.+.+.
T Consensus 86 ~~l-~~~~PDvVi~~g~---~~s~p~~laA~~~~iP~vihe~n~~~-------G---~-------~nr~l~~~a~~v~~~ 144 (365)
T 3s2u_A 86 RVI-RQLRPVCVLGLGG---YVTGPGGLAARLNGVPLVIHEQNAVA-------G---T-------ANRSLAPIARRVCEA 144 (365)
T ss_dssp HHH-HHHCCSEEEECSS---STHHHHHHHHHHTTCCEEEEECSSSC-------C---H-------HHHHHGGGCSEEEES
T ss_pred HHH-HhcCCCEEEEcCC---cchHHHHHHHHHcCCCEEEEecchhh-------h---h-------HHHhhccccceeeec
Confidence 222 3479999998865 22334556678889999975555321 1 1 124667889988776
Q ss_pred CHHHHHHHHHhhCCcEEEecCCC-CCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccc
Q 015058 174 TQAMQHELAQNWGIKATVLYDQP-PEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF 252 (414)
Q Consensus 174 S~~~~~~l~~~~gi~i~vI~n~~-~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (414)
.+... ....+..++.|.. .+.+.+.. ...+
T Consensus 145 ~~~~~-----~~~~k~~~~g~pvr~~~~~~~~--------------------------------------------~~~~ 175 (365)
T 3s2u_A 145 FPDTF-----PASDKRLTTGNPVRGELFLDAH--------------------------------------------ARAP 175 (365)
T ss_dssp STTSS-----CC---CEECCCCCCGGGCCCTT--------------------------------------------SSCC
T ss_pred ccccc-----cCcCcEEEECCCCchhhccchh--------------------------------------------hhcc
Confidence 55321 0111234444442 12221110 0113
Q ss_pred cCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEE-EEcCCCChHHH
Q 015058 253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI-ITGKGPDKESY 331 (414)
Q Consensus 253 l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~li-I~G~G~~~e~l 331 (414)
++++++.++++.|+....+..+.+++|++.+.. ..++.++ ++|++ +.+..
T Consensus 176 ~~~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~----------------------------~~~~~vi~~~G~~-~~~~~ 226 (365)
T 3s2u_A 176 LTGRRVNLLVLGGSLGAEPLNKLLPEALAQVPL----------------------------EIRPAIRHQAGRQ-HAEIT 226 (365)
T ss_dssp CTTSCCEEEECCTTTTCSHHHHHHHHHHHTSCT----------------------------TTCCEEEEECCTT-THHHH
T ss_pred cCCCCcEEEEECCcCCccccchhhHHHHHhccc----------------------------ccceEEEEecCcc-ccccc
Confidence 455667788888999988888888888887653 1234444 45655 45667
Q ss_pred HHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 332 EEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 332 ~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
.+..++++. ++.+.+ ..+|++.+|++||++|+- +| ++.+.|+|++|+|+|....
T Consensus 227 ~~~~~~~~~-~~~v~~---f~~dm~~~l~~aDlvI~r----aG---~~Tv~E~~a~G~P~Ilip~ 280 (365)
T 3s2u_A 227 AERYRTVAV-EADVAP---FISDMAAAYAWADLVICR----AG---ALTVSELTAAGLPAFLVPL 280 (365)
T ss_dssp HHHHHHTTC-CCEEES---CCSCHHHHHHHCSEEEEC----CC---HHHHHHHHHHTCCEEECC-
T ss_pred cceeccccc-cccccc---chhhhhhhhccceEEEec----CC---cchHHHHHHhCCCeEEecc
Confidence 777777766 466677 458999999999999952 23 6789999999999997544
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.8e-13 Score=135.72 Aligned_cols=97 Identities=15% Similarity=0.135 Sum_probs=67.2
Q ss_pred CCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEE-EEEcCCCChHHHHHH
Q 015058 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKGPDKESYEEK 334 (414)
Q Consensus 256 ~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~l-iI~G~G~~~e~l~~~ 334 (414)
+++.++++.|++. .++.+.+.++++.+.+ .+++++ +++|+|++.+.++
T Consensus 231 ~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~----------------------------~~~~~~~~~~G~~~~~~~l~-- 279 (430)
T 2iyf_A 231 AEKVVLVSLGSAF-TKQPAFYRECVRAFGN----------------------------LPGWHLVLQIGRKVTPAELG-- 279 (430)
T ss_dssp CSEEEEEECTTTC-C-CHHHHHHHHHHHTT----------------------------CTTEEEEEECC---CGGGGC--
T ss_pred CCCeEEEEcCCCC-CCcHHHHHHHHHHHhc----------------------------CCCeEEEEEeCCCCChHHhc--
Confidence 4456888999998 5565665555554431 246777 5789998766542
Q ss_pred HHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 335 IRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 335 i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
.+. +|.+.| |++.. .+|+.||++|+. +| .++++|||++|+|+|+....+
T Consensus 280 ----~~~~~v~~~~-~~~~~---~~l~~ad~~v~~----~G---~~t~~Ea~~~G~P~i~~p~~~ 329 (430)
T 2iyf_A 280 ----ELPDNVEVHD-WVPQL---AILRQADLFVTH----AG---AGGSQEGLATATPMIAVPQAV 329 (430)
T ss_dssp ----SCCTTEEEES-SCCHH---HHHTTCSEEEEC----CC---HHHHHHHHHTTCCEEECCCSH
T ss_pred ----cCCCCeEEEe-cCCHH---HHhhccCEEEEC----CC---ccHHHHHHHhCCCEEECCCcc
Confidence 244 899997 88765 689999999852 12 468999999999999987644
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.47 E-value=3.3e-12 Score=125.71 Aligned_cols=95 Identities=18% Similarity=0.182 Sum_probs=63.8
Q ss_pred CCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEE-EEcCCCChHHHHH
Q 015058 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI-ITGKGPDKESYEE 333 (414)
Q Consensus 255 ~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~li-I~G~G~~~e~l~~ 333 (414)
++++.++++.|+....+ -+.+.++++.+.+ .+ ++++ ++|+|++.+.+++
T Consensus 229 ~~~~~v~v~~G~~~~~~-~~~~~~~~~~~~~----------------------------~~-~~~~~~~g~~~~~~~~~~ 278 (402)
T 3ia7_A 229 PDAPVLLVSLGNQFNEH-PEFFRACAQAFAD----------------------------TP-WHVVMAIGGFLDPAVLGP 278 (402)
T ss_dssp TTCCEEEEECCSCSSCC-HHHHHHHHHHHTT----------------------------SS-CEEEEECCTTSCGGGGCS
T ss_pred CCCCEEEEECCCCCcch-HHHHHHHHHHHhc----------------------------CC-cEEEEEeCCcCChhhhCC
Confidence 45667888999997664 2333333333321 23 5554 5888877654432
Q ss_pred HHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 334 KIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 334 ~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
+. +|.+.| |++.. .+|+.||++|+. +| .+.++|||++|+|+|+...
T Consensus 279 ------~~~~v~~~~-~~~~~---~ll~~ad~~v~~----~G---~~t~~Ea~~~G~P~v~~p~ 325 (402)
T 3ia7_A 279 ------LPPNVEAHQ-WIPFH---SVLAHARACLTH----GT---TGAVLEAFAAGVPLVLVPH 325 (402)
T ss_dssp ------CCTTEEEES-CCCHH---HHHTTEEEEEEC----CC---HHHHHHHHHTTCCEEECGG
T ss_pred ------CCCcEEEec-CCCHH---HHHhhCCEEEEC----CC---HHHHHHHHHhCCCEEEeCC
Confidence 34 899997 77665 899999999953 22 3578999999999997644
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=3.3e-13 Score=133.38 Aligned_cols=97 Identities=11% Similarity=0.041 Sum_probs=71.7
Q ss_pred CCCCeEEEEeccCCCCCCh-HHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHH
Q 015058 255 PNRPALVVSSTSWTPDEDF-GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (414)
Q Consensus 255 ~~~~~~i~~vgrl~~~Kg~-~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~ 333 (414)
++++.++++.|++...++. ..+++++... + ..|+++++++|+|+..+.++
T Consensus 216 ~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~---------------------------~~p~~~~v~~~~~~~~~~l~- 266 (391)
T 3tsa_A 216 TSARRVCICMGRMVLNATGPAPLLRAVAAA-T---------------------------ELPGVEAVIAVPPEHRALLT- 266 (391)
T ss_dssp CSSEEEEEECCHHHHHHHCSHHHHHHHHHH-H---------------------------TSTTEEEEEECCGGGGGGCT-
T ss_pred CCCCEEEEEcCCCCCcccchHHHHHHHHHh-c---------------------------cCCCeEEEEEECCcchhhcc-
Confidence 4556688889999775555 6777776655 4 36789999999887655443
Q ss_pred HHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 334 KIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 334 ~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
++. +|.+.| |++.. .++++||++|+. +-++.++|||++|+|+|+...
T Consensus 267 -----~~~~~v~~~~-~~~~~---~ll~~ad~~v~~-------~G~~t~~Ea~~~G~P~v~~p~ 314 (391)
T 3tsa_A 267 -----DLPDNARIAE-SVPLN---LFLRTCELVICA-------GGSGTAFTATRLGIPQLVLPQ 314 (391)
T ss_dssp -----TCCTTEEECC-SCCGG---GTGGGCSEEEEC-------CCHHHHHHHHHTTCCEEECCC
T ss_pred -----cCCCCEEEec-cCCHH---HHHhhCCEEEeC-------CCHHHHHHHHHhCCCEEecCC
Confidence 344 899997 87654 466999999942 224578999999999999644
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=9.6e-13 Score=130.95 Aligned_cols=94 Identities=15% Similarity=0.077 Sum_probs=70.0
Q ss_pred CCCCeEEEEeccCCCC-CChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHH
Q 015058 255 PNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (414)
Q Consensus 255 ~~~~~~i~~vgrl~~~-Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~ 333 (414)
++++.++++.|++... ++.+.+.++++.+.+ . +++++++|+|++.+.++
T Consensus 230 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~----------------------------~-~~~~v~~~g~~~~~~l~- 279 (398)
T 3oti_A 230 PARPEVAITMGTIELQAFGIGAVEPIIAAAGE----------------------------V-DADFVLALGDLDISPLG- 279 (398)
T ss_dssp CSSCEEEECCTTTHHHHHCGGGHHHHHHHHHT----------------------------S-SSEEEEECTTSCCGGGC-
T ss_pred CCCCEEEEEcCCCccccCcHHHHHHHHHHHHc----------------------------C-CCEEEEEECCcChhhhc-
Confidence 4566788999999765 466666666665542 2 57899998887755443
Q ss_pred HHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe
Q 015058 334 KIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL 394 (414)
Q Consensus 334 ~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s 394 (414)
++. +|.+.| |+ ++..+|+.||++|+. +-++.++|||++|+|+|+.
T Consensus 280 -----~~~~~v~~~~-~~---~~~~ll~~ad~~v~~-------~G~~t~~Eal~~G~P~v~~ 325 (398)
T 3oti_A 280 -----TLPRNVRAVG-WT---PLHTLLRTCTAVVHH-------GGGGTVMTAIDAGIPQLLA 325 (398)
T ss_dssp -----SCCTTEEEES-SC---CHHHHHTTCSEEEEC-------CCHHHHHHHHHHTCCEEEC
T ss_pred -----cCCCcEEEEc-cC---CHHHHHhhCCEEEEC-------CCHHHHHHHHHhCCCEEEc
Confidence 344 899997 76 577889999999952 2256899999999999994
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=6e-13 Score=132.20 Aligned_cols=93 Identities=10% Similarity=0.020 Sum_probs=56.5
Q ss_pred CCCeEEEEeccCCCCC----------ChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCC
Q 015058 256 NRPALVVSSTSWTPDE----------DFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG 325 (414)
Q Consensus 256 ~~~~~i~~vgrl~~~K----------g~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G 325 (414)
+++.++++.|++...+ .+..+++|+..+ +++++++|+|
T Consensus 226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~~~ 273 (398)
T 4fzr_A 226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL--------------------------------GFEVVVAVSD 273 (398)
T ss_dssp SSCEEECC----------------CCSHHHHHHHGGGG--------------------------------TCEEEECCCC
T ss_pred CCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC--------------------------------CCEEEEEeCC
Confidence 5566888999997655 344444444321 4788998888
Q ss_pred CChHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 326 PDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 326 ~~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
+..+.+++ +. +|.+.| |+ ++..+|+.||++|+. +-++.++|||++|+|+|+....
T Consensus 274 ~~~~~l~~------~~~~v~~~~-~~---~~~~ll~~ad~~v~~-------gG~~t~~Ea~~~G~P~v~~p~~ 329 (398)
T 4fzr_A 274 KLAQTLQP------LPEGVLAAG-QF---PLSAIMPACDVVVHH-------GGHGTTLTCLSEGVPQVSVPVI 329 (398)
T ss_dssp --------------CCTTEEEES-CC---CHHHHGGGCSEEEEC-------CCHHHHHHHHHTTCCEEECCCS
T ss_pred cchhhhcc------CCCcEEEeC-cC---CHHHHHhhCCEEEec-------CCHHHHHHHHHhCCCEEecCCc
Confidence 76555442 34 899997 76 478899999999942 1266899999999999996443
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=3.2e-11 Score=120.03 Aligned_cols=125 Identities=14% Similarity=0.052 Sum_probs=69.2
Q ss_pred CCEEEEEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCC-----CCCchHHH
Q 015058 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRG-----LPKVLKPV 78 (414)
Q Consensus 4 ~~~~~v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~-----~~~~~~~~ 78 (414)
|.++.++..+..|.-.++...+..|.++ ||+|+++|... ..+..+..+++++.++........ .......+
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~-Gh~V~v~~~~~---~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRR-GHRVSYVTAGG---FAEPVRAAGATVVPYQSEIIDADAAEVFGSDDLGVRP 95 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHT-TCEEEEEECGG---GHHHHHHTTCEEEECCCSTTTCCHHHHHHSSSSCHHH
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHC-CCEEEEEeCHH---HHHHHHhcCCEEEeccccccccccchhhccccHHHHH
Confidence 4456666555444555677788999996 99999999443 233344568888888731110000 00001111
Q ss_pred HH-HHHHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCc
Q 015058 79 LL-LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNF 137 (414)
Q Consensus 79 ~~-l~k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~ 137 (414)
.. ..+.....+..+...+ +..+||+|++.++ .. ..+.++++..|+|++...|++
T Consensus 96 ~~~~~~~~~~~~~~l~~~l-~~~~PDlVi~d~~---~~-~~~~~aA~~~giP~v~~~~~~ 150 (415)
T 3rsc_A 96 HLMYLRENVSVLRATAEAL-DGDVPDLVLYDDF---PF-IAGQLLAARWRRPAVRLSAAF 150 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHH-SSSCCSEEEEEST---TH-HHHHHHHHHTTCCEEEEESSC
T ss_pred HHHHHHHHHHHHHHHHHHH-hccCCCEEEECch---hh-hHHHHHHHHhCCCEEEEEecc
Confidence 11 1122222222222222 3479999998744 22 234556677899999887765
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.28 E-value=4e-11 Score=121.24 Aligned_cols=206 Identities=16% Similarity=0.140 Sum_probs=130.2
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
..+||+|+++..+ ...++ .++++..++|++....+. . ++ +...... ...+++.+.+|.+++.|+..+
T Consensus 92 ~~kPD~Vlv~gd~--~~~~a-alaA~~~~IPv~h~eagl-r-----s~-~~~~pee---~nR~~~~~~a~~~~~~te~~~ 158 (385)
T 4hwg_A 92 KEKPDAVLFYGDT--NSCLS-AIAAKRRKIPIFHMEAGN-R-----CF-DQRVPEE---INRKIIDHISDVNITLTEHAR 158 (385)
T ss_dssp HHCCSEEEEESCS--GGGGG-HHHHHHTTCCEEEESCCC-C-----CS-CTTSTHH---HHHHHHHHHCSEEEESSHHHH
T ss_pred hcCCcEEEEECCc--hHHHH-HHHHHHhCCCEEEEeCCC-c-----cc-cccCcHH---HHHHHHHhhhceeecCCHHHH
Confidence 3799999999763 12223 556677899965433332 1 11 1111111 122455678999999999999
Q ss_pred HHHHHhhCCc---EEEecCCCCCCcCCC-ChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccC
Q 015058 179 HELAQNWGIK---ATVLYDQPPEFFHPT-SLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (414)
Q Consensus 179 ~~l~~~~gi~---i~vI~n~~~~~f~p~-~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 254 (414)
+.+.+. |++ +.++.|.-.+.+... +..++.++++++ +++
T Consensus 159 ~~l~~~-G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~l------------------------------------gl~ 201 (385)
T 4hwg_A 159 RYLIAE-GLPAELTFKSGSHMPEVLDRFMPKILKSDILDKL------------------------------------SLT 201 (385)
T ss_dssp HHHHHT-TCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHT------------------------------------TCC
T ss_pred HHHHHc-CCCcCcEEEECCchHHHHHHhhhhcchhHHHHHc------------------------------------CCC
Confidence 999875 875 777766511111110 011222334333 444
Q ss_pred CCCCeEEEEeccC---CCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHH
Q 015058 255 PNRPALVVSSTSW---TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 331 (414)
Q Consensus 255 ~~~~~~i~~vgrl---~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l 331 (414)
+ ++.++++.+|. ...|+++.+++|+..+.++ + ++.+++.. +| +.
T Consensus 202 ~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~---------------------------~-~~~vv~p~-~p---~~ 248 (385)
T 4hwg_A 202 P-KQYFLISSHREENVDVKNNLKELLNSLQMLIKE---------------------------Y-NFLIIFST-HP---RT 248 (385)
T ss_dssp T-TSEEEEEECCC-----CHHHHHHHHHHHHHHHH---------------------------H-CCEEEEEE-CH---HH
T ss_pred c-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhc---------------------------C-CeEEEEEC-Ch---HH
Confidence 4 44677788774 3447789999999988653 3 56766643 33 36
Q ss_pred HHHHHHc-C-C---CcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 332 EEKIRRL-R-L---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 332 ~~~i~~l-~-l---~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
++.+++. + + .+|.+.+ .+...|+..+|+.||++|+. | | ....||+++|+|+|....
T Consensus 249 ~~~l~~~~~~~~~~~~v~l~~-~lg~~~~~~l~~~adlvvt~---S-G----gv~~EA~alG~Pvv~~~~ 309 (385)
T 4hwg_A 249 KKRLEDLEGFKELGDKIRFLP-AFSFTDYVKLQMNAFCILSD---S-G----TITEEASILNLPALNIRE 309 (385)
T ss_dssp HHHHHTSGGGGGTGGGEEECC-CCCHHHHHHHHHHCSEEEEC---C-T----THHHHHHHTTCCEEECSS
T ss_pred HHHHHHHHHHhcCCCCEEEEc-CCCHHHHHHHHHhCcEEEEC---C-c----cHHHHHHHcCCCEEEcCC
Confidence 6667665 4 3 3899986 77788999999999999842 2 3 146899999999999755
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.23 E-value=4.7e-11 Score=117.74 Aligned_cols=93 Identities=15% Similarity=0.144 Sum_probs=65.9
Q ss_pred CCCeEEEEeccCCCC-------CChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCCh
Q 015058 256 NRPALVVSSTSWTPD-------EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 328 (414)
Q Consensus 256 ~~~~~i~~vgrl~~~-------Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~ 328 (414)
+++.++++.|++.+. +.+..+++|+... ++++++++.|++.
T Consensus 209 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~--------------------------------~~~~~~~~g~~~~ 256 (384)
T 2p6p_A 209 TRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW--------------------------------DVELIVAAPDTVA 256 (384)
T ss_dssp SSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT--------------------------------TCEEEEECCHHHH
T ss_pred CCCEEEEECCCCCccccccccHHHHHHHHHHHhcC--------------------------------CcEEEEEeCCCCH
Confidence 445688999999876 5677777776532 4688876655443
Q ss_pred HHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 329 ESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 329 e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
++++ + +. +|.+ | |++ ...+|+.||++|+. .| ++.+.|||++|+|+|+....+
T Consensus 257 ~~l~----~--~~~~v~~-~-~~~---~~~~l~~~d~~v~~----~G---~~t~~Ea~~~G~P~v~~p~~~ 309 (384)
T 2p6p_A 257 EALR----A--EVPQARV-G-WTP---LDVVAPTCDLLVHH----AG---GVSTLTGLSAGVPQLLIPKGS 309 (384)
T ss_dssp HHHH----H--HCTTSEE-E-CCC---HHHHGGGCSEEEEC----SC---TTHHHHHHHTTCCEEECCCSH
T ss_pred HhhC----C--CCCceEE-c-CCC---HHHHHhhCCEEEeC----Cc---HHHHHHHHHhCCCEEEccCcc
Confidence 4333 2 33 8899 7 876 45689999999953 12 457999999999999986643
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.00 E-value=2.9e-08 Score=99.33 Aligned_cols=95 Identities=13% Similarity=0.100 Sum_probs=65.4
Q ss_pred CCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEE-EEEcCCCChHHHHHH
Q 015058 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKGPDKESYEEK 334 (414)
Q Consensus 256 ~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~l-iI~G~G~~~e~l~~~ 334 (414)
+++.++++.|+.. .+..+.+.++++.+. .+++++ +++|+|.+.+.++
T Consensus 254 ~~~~v~v~~Gs~~-~~~~~~~~~~~~al~-----------------------------~~~~~~~~~~g~~~~~~~~~-- 301 (424)
T 2iya_A 254 GRPVLLIALGSAF-TDHLDFYRTCLSAVD-----------------------------GLDWHVVLSVGRFVDPADLG-- 301 (424)
T ss_dssp SCCEEEEECCSSS-CCCHHHHHHHHHHHT-----------------------------TCSSEEEEECCTTSCGGGGC--
T ss_pred CCCEEEEEcCCCC-cchHHHHHHHHHHHh-----------------------------cCCcEEEEEECCcCChHHhc--
Confidence 4566888999997 444444444444332 134666 5579887655432
Q ss_pred HHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 335 IRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 335 i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
.+. +|.+.+ |++.. .+|+.||++|+. .| .+.++||+++|+|+|+....
T Consensus 302 ----~~~~~v~~~~-~~~~~---~~l~~~d~~v~~----~G---~~t~~Ea~~~G~P~i~~p~~ 350 (424)
T 2iya_A 302 ----EVPPNVEVHQ-WVPQL---DILTKASAFITH----AG---MGSTMEALSNAVPMVAVPQI 350 (424)
T ss_dssp ----SCCTTEEEES-SCCHH---HHHTTCSEEEEC----CC---HHHHHHHHHTTCCEEECCCS
T ss_pred ----cCCCCeEEec-CCCHH---HHHhhCCEEEEC----Cc---hhHHHHHHHcCCCEEEecCc
Confidence 244 899997 88765 689999999852 12 46899999999999997654
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=3.4e-07 Score=91.75 Aligned_cols=120 Identities=9% Similarity=0.005 Sum_probs=67.0
Q ss_pred EEEEEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCC-----CCCCCchHHHHH
Q 015058 6 RACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIP-----RGLPKVLKPVLL 80 (414)
Q Consensus 6 ~~~v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~-----~~~~~~~~~~~~ 80 (414)
|+.++..+..|.-.++...+..|.++ ||+|.|+|... .....+..+++++.++...... ........ .
T Consensus 2 rIli~~~gt~Ghv~p~~~La~~L~~~-Gh~V~v~~~~~---~~~~v~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~---~ 74 (404)
T 3h4t_A 2 GVLITGCGSRGDTEPLVALAARLREL-GADARMCLPPD---YVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAE---V 74 (404)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHHHT-TCCEEEEECGG---GHHHHHHTTCCEEECSSCSSGGGSCTTCCCTTCGG---G
T ss_pred eEEEEeCCCCccHHHHHHHHHHHHHC-CCeEEEEeCHH---HHHHHHHcCCceeecCCCHHHHhccccCCHHHHHH---H
Confidence 34555555554445666788899886 99999998653 3333445678887776321100 00101111 1
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCc
Q 015058 81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNF 137 (414)
Q Consensus 81 l~k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~ 137 (414)
+...+...+..++..+ .+||+|+++.+. +....+.+++...|+|++...|..
T Consensus 75 ~~~~~~~~~~~l~~~~---~~pD~Vi~~~~~--~~~~~a~~~A~~lgiP~v~~~~~p 126 (404)
T 3h4t_A 75 VTEVVAEWFDKVPAAI---EGCDAVVTTGLL--PAAVAVRSMAEKLGIPYRYTVLSP 126 (404)
T ss_dssp HHHHHHHHHHHHHHHH---TTCSEEEEEECH--HHHHHHHHHHHHHTCCEEEEESSG
T ss_pred HHHHHHHHHHHHHHHh---cCCCEEEECCch--hhhhhhhhHHhhcCCCEEEEEcCC
Confidence 1222222222223222 479999988651 223334566777899999877764
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=98.83 E-value=1.2e-07 Score=95.82 Aligned_cols=95 Identities=15% Similarity=0.001 Sum_probs=65.7
Q ss_pred CCCCeEEEEeccCCCC-----CChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChH
Q 015058 255 PNRPALVVSSTSWTPD-----EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE 329 (414)
Q Consensus 255 ~~~~~~i~~vgrl~~~-----Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e 329 (414)
++++.++++.|++... +.+..+++|+..+ ++++++.+.|++.+
T Consensus 265 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~g~~~~~ 312 (441)
T 2yjn_A 265 PERRRVCLTLGISSRENSIGQVSIEELLGAVGDV--------------------------------DAEIIATFDAQQLE 312 (441)
T ss_dssp CSSCEEEEEC----------CCSTTTTHHHHHTS--------------------------------SSEEEECCCTTTTS
T ss_pred CCCCEEEEECCCCcccccChHHHHHHHHHHHHcC--------------------------------CCEEEEEECCcchh
Confidence 4556788999999864 7888888887542 46888877666544
Q ss_pred HHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 330 SYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 330 ~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
.++ ++. +|.+.+ |++. ..+|.+||++|+. +-.+.+.|||++|+|+|+....+
T Consensus 313 ~l~------~~~~~v~~~~-~~~~---~~ll~~ad~~V~~-------~G~~t~~Ea~~~G~P~i~~p~~~ 365 (441)
T 2yjn_A 313 GVA------NIPDNVRTVG-FVPM---HALLPTCAATVHH-------GGPGSWHTAAIHGVPQVILPDGW 365 (441)
T ss_dssp SCS------SCCSSEEECC-SCCH---HHHGGGCSEEEEC-------CCHHHHHHHHHTTCCEEECCCSH
T ss_pred hhc------cCCCCEEEec-CCCH---HHHHhhCCEEEEC-------CCHHHHHHHHHhCCCEEEeCCcc
Confidence 332 344 899997 8875 4568999999952 12568999999999999986643
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.76 E-value=6.9e-07 Score=89.45 Aligned_cols=91 Identities=12% Similarity=-0.008 Sum_probs=62.5
Q ss_pred CCeEEEEeccCC-CCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEE-EcCCCChHHHHHH
Q 015058 257 RPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII-TGKGPDKESYEEK 334 (414)
Q Consensus 257 ~~~~i~~vgrl~-~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI-~G~G~~~e~l~~~ 334 (414)
++.++++.|++. +.+.++.+++|++.+ +.++++ +|.+....
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~g~~~~~~----- 280 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH--------------------------------GRRVILSRGWADLVL----- 280 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT--------------------------------TCCEEECTTCTTCCC-----
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC--------------------------------CCeEEEEeCCCcccc-----
Confidence 355888999994 777777778877643 134555 48765421
Q ss_pred HHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 335 IRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 335 i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
..+. +|.+.+ |++..+ +|.+||++|+. .| .+.+.|||++|+|+|+....+
T Consensus 281 ---~~~~~~v~~~~-~~~~~~---~l~~~d~~v~~----~G---~~t~~Ea~~~G~P~i~~p~~~ 331 (415)
T 1iir_A 281 ---PDDGADCFAIG-EVNHQV---LFGRVAAVIHH----GG---AGTTHVAARAGAPQILLPQMA 331 (415)
T ss_dssp ---SSCGGGEEECS-SCCHHH---HGGGSSEEEEC----CC---HHHHHHHHHHTCCEEECCCST
T ss_pred ---cCCCCCEEEeC-cCChHH---HHhhCCEEEeC----CC---hhHHHHHHHcCCCEEECCCCC
Confidence 2344 899997 998754 57999999952 12 368999999999999976544
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=98.61 E-value=4.7e-06 Score=89.26 Aligned_cols=111 Identities=14% Similarity=0.017 Sum_probs=80.7
Q ss_pred ccCCC-CCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEE--EEEcC--CC
Q 015058 252 FLKPN-RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF--IITGK--GP 326 (414)
Q Consensus 252 ~l~~~-~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~l--iI~G~--G~ 326 (414)
+++.+ ..+++++.++ ..|..+.+++++..+.++ .|+..+ .+.|+ |+
T Consensus 434 ~lp~~~G~v~Fg~fn~--~~Ki~p~~l~~WarIL~~---------------------------vP~s~L~l~~~g~~~g~ 484 (631)
T 3q3e_A 434 LLRENPEVVNIGIAST--TMKLNPYFLEALKAIRDR---------------------------AKVKVHFHFALGQSNGI 484 (631)
T ss_dssp CCCSCCSEEEEEEEEC--STTCCHHHHHHHHHHHHH---------------------------CSSEEEEEEEESSCCGG
T ss_pred cCCcCCCeEEEEECCc--cccCCHHHHHHHHHHHHh---------------------------CCCcEEEEEecCCCchh
Confidence 44442 2335555555 578899999999998875 466444 24774 44
Q ss_pred ChHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 327 DKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 327 ~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
... +.+.+.++|+. +|.|.| .++.+++...|+.||+++-++ .. +-++..+|||+||+|||+..-.
T Consensus 485 ~~~-~~~~~~~~GI~~Rv~F~g-~~p~~e~la~y~~aDIfLDpf--py--~GgtTtlEALwmGVPVVTl~G~ 550 (631)
T 3q3e_A 485 THP-YVERFIKSYLGDSATAHP-HSPYHQYLRILHNCDMMVNPF--PF--GNTNGIIDMVTLGLVGVCKTGA 550 (631)
T ss_dssp GHH-HHHHHHHHHHGGGEEEEC-CCCHHHHHHHHHTCSEEECCS--SS--CCSHHHHHHHHTTCCEEEECCS
T ss_pred hHH-HHHHHHHcCCCccEEEcC-CCCHHHHHHHHhcCcEEEeCC--cc--cCChHHHHHHHcCCCEEeccCC
Confidence 444 44556788997 999997 999999999999999999442 21 2378899999999999986543
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.55 E-value=7.5e-06 Score=81.76 Aligned_cols=90 Identities=8% Similarity=-0.107 Sum_probs=61.5
Q ss_pred CCeEEEEeccCC---CCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEE-EcCCCChHHHH
Q 015058 257 RPALVVSSTSWT---PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII-TGKGPDKESYE 332 (414)
Q Consensus 257 ~~~~i~~vgrl~---~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI-~G~G~~~e~l~ 332 (414)
++.++++.|++. +.+.++.+++|++.+ +.++++ +|.+... .
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~g~~~~~--~- 281 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ--------------------------------GRRVILSRGWTELV--L- 281 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT--------------------------------TCCEEEECTTTTCC--C-
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC--------------------------------CCeEEEEeCCcccc--c-
Confidence 345888899985 345556666665532 245655 4776432 1
Q ss_pred HHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 333 EKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 333 ~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
..+. +|.+.+ |++. ..+|.+||++|+- .| .+.+.||+++|+|+|+.-..
T Consensus 282 -----~~~~~~v~~~~-~~~~---~~ll~~~d~~v~~----~G---~~t~~Ea~~~G~P~i~~p~~ 331 (416)
T 1rrv_A 282 -----PDDRDDCFAID-EVNF---QALFRRVAAVIHH----GS---AGTEHVATRAGVPQLVIPRN 331 (416)
T ss_dssp -----SCCCTTEEEES-SCCH---HHHGGGSSEEEEC----CC---HHHHHHHHHHTCCEEECCCS
T ss_pred -----cCCCCCEEEec-cCCh---HHHhccCCEEEec----CC---hhHHHHHHHcCCCEEEccCC
Confidence 2344 899997 8874 5578999999952 12 45899999999999996553
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=5.9e-07 Score=88.30 Aligned_cols=99 Identities=16% Similarity=0.085 Sum_probs=62.3
Q ss_pred CCCCCeEEEEeccCCCCCC-hHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHH
Q 015058 254 KPNRPALVVSSTSWTPDED-FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (414)
Q Consensus 254 ~~~~~~~i~~vgrl~~~Kg-~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~ 332 (414)
.++++.++++.|++...++ .+.+.++++.+.+ .+..+++.+.|...+..
T Consensus 234 ~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~-----------------------------~~~~~v~~~~~~~~~~~- 283 (400)
T 4amg_A 234 AAGRRRIAVTLGSIDALSGGIAKLAPLFSEVAD-----------------------------VDAEFVLTLGGGDLALL- 283 (400)
T ss_dssp CTTCCEEEECCCSCC--CCSSSTTHHHHHHGGG-----------------------------SSSEEEEECCTTCCCCC-
T ss_pred cCCCcEEEEeCCcccccCccHHHHHHHHHHhhc-----------------------------cCceEEEEecCcccccc-
Confidence 3456667888898876554 3444444444432 24677776655443221
Q ss_pred HHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 333 EKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 333 ~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
..+. +|.+.+ |+| ...+|..||+||+- .| .+.+.|||++|+|+|+.-..+
T Consensus 284 -----~~~~~~v~~~~-~~p---~~~lL~~~~~~v~h----~G---~~s~~Eal~~GvP~v~~P~~~ 334 (400)
T 4amg_A 284 -----GELPANVRVVE-WIP---LGALLETCDAIIHH----GG---SGTLLTALAAGVPQCVIPHGS 334 (400)
T ss_dssp -----CCCCTTEEEEC-CCC---HHHHHTTCSEEEEC----CC---HHHHHHHHHHTCCEEECCC--
T ss_pred -----ccCCCCEEEEe-ecC---HHHHhhhhhheecc----CC---ccHHHHHHHhCCCEEEecCcc
Confidence 2344 899986 887 45678999999842 12 457999999999999854443
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.40 E-value=5.2e-07 Score=79.21 Aligned_cols=92 Identities=11% Similarity=0.048 Sum_probs=67.1
Q ss_pred CCCeEEEEeccCC---CCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHH
Q 015058 256 NRPALVVSSTSWT---PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (414)
Q Consensus 256 ~~~~~i~~vgrl~---~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~ 332 (414)
+++.++++.|++. +.|.+..+++|++.+ +.+++++++|+..+
T Consensus 20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~--------------------------------~~~~~~~~g~~~~~--- 64 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMTEERANVIASALAQI--------------------------------PQKVLWRFDGNKPD--- 64 (170)
T ss_dssp TTCEEEEECCSCCTTCCHHHHHHHHHHHTTS--------------------------------SSEEEEECCSSCCT---
T ss_pred CCCEEEEECCCCcccCCHHHHHHHHHHHHhC--------------------------------CCeEEEEECCcCcc---
Confidence 4456899999996 566677777776432 25778877666532
Q ss_pred HHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 333 EKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 333 ~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
++. +|.+.| |++.+++..+ ++||++|+. +-++.+.|||++|+|+|+....
T Consensus 65 ------~~~~~v~~~~-~~~~~~~l~~-~~ad~~I~~-------~G~~t~~Ea~~~G~P~i~~p~~ 115 (170)
T 2o6l_A 65 ------TLGLNTRLYK-WIPQNDLLGH-PKTRAFITH-------GGANGIYEAIYHGIPMVGIPLF 115 (170)
T ss_dssp ------TCCTTEEEES-SCCHHHHHTS-TTEEEEEEC-------CCHHHHHHHHHHTCCEEECCCS
T ss_pred ------cCCCcEEEec-CCCHHHHhcC-CCcCEEEEc-------CCccHHHHHHHcCCCEEeccch
Confidence 344 899997 9988655433 999999952 1257899999999999998764
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=97.86 E-value=0.0019 Score=63.84 Aligned_cols=106 Identities=14% Similarity=0.121 Sum_probs=73.0
Q ss_pred ccCCCCCeEEEEeccCCCCCC--hHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChH
Q 015058 252 FLKPNRPALVVSSTSWTPDED--FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE 329 (414)
Q Consensus 252 ~l~~~~~~~i~~vgrl~~~Kg--~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e 329 (414)
+++++++.+++..|.=.+.|. .+...+.++.+.++ +.+++++|...+++
T Consensus 180 g~~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~-----------------------------g~~vvl~g~~~e~~ 230 (349)
T 3tov_A 180 GLTDTDILIGFNIGSAVPEKRWPAERFAHVADYFGRL-----------------------------GYKTVFFGGPMDLE 230 (349)
T ss_dssp TCCTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH-----------------------------TCEEEECCCTTTHH
T ss_pred CCCCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC-----------------------------CCeEEEEeCcchHH
Confidence 344456667777665334444 46788888887652 46778888766766
Q ss_pred HHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEee
Q 015058 330 SYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLW 395 (414)
Q Consensus 330 ~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~ 395 (414)
..++..+..+-..+.+.| ..+-.++..+++.||++|+..+ | |+=+ |.|.|+|+|+..
T Consensus 231 ~~~~i~~~~~~~~~~l~g-~~sl~e~~ali~~a~~~i~~Ds---G---~~Hl--Aaa~g~P~v~lf 287 (349)
T 3tov_A 231 MVQPVVEQMETKPIVATG-KFQLGPLAAAMNRCNLLITNDS---G---PMHV--GISQGVPIVALY 287 (349)
T ss_dssp HHHHHHHTCSSCCEECTT-CCCHHHHHHHHHTCSEEEEESS---H---HHHH--HHTTTCCEEEEC
T ss_pred HHHHHHHhcccccEEeeC-CCCHHHHHHHHHhCCEEEECCC---C---HHHH--HHhcCCCEEEEE
Confidence 666666655533466665 7788999999999999996421 2 3333 889999999854
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.0014 Score=71.87 Aligned_cols=116 Identities=15% Similarity=0.082 Sum_probs=77.3
Q ss_pred cCCCCCeEEEEeccCCCCCChHH-HHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCC-ChHH
Q 015058 253 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-DKES 330 (414)
Q Consensus 253 l~~~~~~~i~~vgrl~~~Kg~~~-LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~-~~e~ 330 (414)
++|+.+ +++.+.|++++|+++. ++..+..+.+ |.++.+.....++|++.|+|. ..+.
T Consensus 522 vdpd~l-~~~~vkRl~eYKRq~Lnil~ii~~~~~--------------------i~~~~~~~~~p~q~If~GKA~P~y~~ 580 (796)
T 1l5w_A 522 INPQAI-FDIQIKRLHEYKRQHLNLLHILALYKE--------------------IRENPQADRVPRVFLFGAKAAPGYYL 580 (796)
T ss_dssp CCTTSE-EEEEESCCCGGGTHHHHHHHHHHHHHH--------------------HHTCTTCCCCCEEEEEECCCCTTCHH
T ss_pred cCCCcc-eEeeeecchhhcccCEeHHHHHHHHHH--------------------HhcCCCCCCCCeEEEEEecCChhHHH
Confidence 456664 8999999999999999 8888887753 111111112349999999995 3222
Q ss_pred H---HHHHHHc--------CCC---cEEEecCCCChhhHHHHHhhccEEEeeccCC---CCCCCchhHHHHHHcCCeEEE
Q 015058 331 Y---EEKIRRL--------RLK---RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS---SGLDLPMKVCYCWYSRYSLKL 393 (414)
Q Consensus 331 l---~~~i~~l--------~l~---~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~---~g~~lP~kl~Eama~G~Pvi~ 393 (414)
- .+++.+. ... +|.|+- --..+--..++++||++..+++.+ +|. .=+-+|.-|.+-|.
T Consensus 581 aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGT----s~MKam~NGaL~iG 655 (796)
T 1l5w_A 581 AKNIIFAINKVADVINNDPLVGDKLKVVFLP-DYCVSAAEKLIPAADISEQISTAGKEASGT----GNMKLALNGALTVG 655 (796)
T ss_dssp HHHHHHHHHHHHHHHHTCTTTGGGEEEEECS-SCCHHHHHHHGGGCSEEEECCCTTTCCCCS----HHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHhccccccCCceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCch----HHHHHHHcCCeeec
Confidence 2 2223332 222 599985 347777888999999999776532 343 34667888988886
Q ss_pred e
Q 015058 394 L 394 (414)
Q Consensus 394 s 394 (414)
+
T Consensus 656 t 656 (796)
T 1l5w_A 656 T 656 (796)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.0057 Score=67.09 Aligned_cols=119 Identities=13% Similarity=0.021 Sum_probs=77.4
Q ss_pred cCCCCCeEEEEeccCCCCCChHH-HHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCC-ChHH
Q 015058 253 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-DKES 330 (414)
Q Consensus 253 l~~~~~~~i~~vgrl~~~Kg~~~-LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~-~~e~ 330 (414)
++|+.+ +++.+.|++++|+++. ++..+..+.+ |.++.+.....++|++.|+|. ..+.
T Consensus 512 vdpd~l-~~~~vkRlheYKRq~Lnil~ii~~~~~--------------------i~~~~~~~~~p~q~If~GKA~P~y~~ 570 (796)
T 2c4m_A 512 IDPESI-FDVQIKRLHEYKRQLMNALYVLDLYFR--------------------IKEDGLTDIPARTVIFGAKAAPGYVR 570 (796)
T ss_dssp CCTTSE-EEEEECCCCGGGTHHHHHHHHHHHHHH--------------------HHTSCCCSSCCEEEEEECCCCTTCHH
T ss_pred CCCCCc-EEEEeecchhhcccCEeHHHHHHHHHH--------------------HhhCCCCCCCCeEEEEEecCCHhHHH
Confidence 456664 8999999999999999 8888887753 111111111349999999995 3222
Q ss_pred H---HHHHHHc--------CC--C-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe
Q 015058 331 Y---EEKIRRL--------RL--K-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL 394 (414)
Q Consensus 331 l---~~~i~~l--------~l--~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s 394 (414)
- .+++.+. .. . +|.|+- --..+--..++++||++..+++.+. |.=+..=+-+|.-|.+-|.+
T Consensus 571 aK~iIk~i~~va~~in~dp~~~~~lKVvFl~-nY~vslA~~I~~gaDv~l~~S~a~~-EAsGTs~MKam~NGaL~iGt 646 (796)
T 2c4m_A 571 AKAIIKLINSIADLVNNDPEVSPLLKVVFVE-NYNVSPAEHILPASDVSEQISTAGK-EASGTSNMKFMMNGALTLGT 646 (796)
T ss_dssp HHHHHHHHHHHHHHHHTCTTTTTTEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTS-CSCCHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHhccccccCCceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCC-CCCchHHHHHHHcCCeEEec
Confidence 2 2222222 22 2 699986 4477788889999999997755321 11123446678889888865
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0062 Score=66.17 Aligned_cols=113 Identities=9% Similarity=-0.057 Sum_probs=83.8
Q ss_pred ccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCC-C
Q 015058 248 GIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-P 326 (414)
Q Consensus 248 ~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G-~ 326 (414)
+...+|+.+. ++..+..++ .|=-+..+++...+.++ .|+-.|++...+ .
T Consensus 514 R~~~gLp~~~-v~f~~fN~~--~Ki~p~~~~~W~~IL~~---------------------------vP~S~L~Ll~~~~~ 563 (723)
T 4gyw_A 514 RSQYGLPEDA-IVYCNFNQL--YKIDPSTLQMWANILKR---------------------------VPNSVLWLLRFPAV 563 (723)
T ss_dssp GGGGTCCTTS-EEEECCSCG--GGCCHHHHHHHHHHHHH---------------------------CSSEEEEEEETTGG
T ss_pred hhhcCCCCCC-EEEEeCCcc--ccCCHHHHHHHHHHHHh---------------------------CCCCeEEEEeCcHH
Confidence 5566787665 344444444 45567778888887775 578777665543 4
Q ss_pred ChHHHHHHHHHcCCC--cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEee
Q 015058 327 DKESYEEKIRRLRLK--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLW 395 (414)
Q Consensus 327 ~~e~l~~~i~~l~l~--~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~ 395 (414)
.++.+++.+++.|+. ||.|.+ ..+.+|.-..++.+||++=+ -. .+=.+..+||+++|+|||+..
T Consensus 564 ~~~~l~~~~~~~gi~~~r~~f~~-~~~~~~~l~~~~~~Di~LDt--~p--~~g~tT~~eal~~GvPvvt~~ 629 (723)
T 4gyw_A 564 GEPNIQQYAQNMGLPQNRIIFSP-VAPKEEHVRRGQLADVCLDT--PL--CNGHTTGMDVLWAGTPMVTMP 629 (723)
T ss_dssp GHHHHHHHHHHTTCCGGGEEEEE-CCCHHHHHHHGGGCSEEECC--SS--SCCSHHHHHHHHTTCCEEBCC
T ss_pred HHHHHHHHHHhcCCCcCeEEECC-CCCHHHHHHHhCCCeEEeCC--CC--cCCHHHHHHHHHcCCCEEEcc
Confidence 577899999999997 999997 89999999999999999821 11 112457899999999999854
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=96.82 E-value=0.14 Score=52.28 Aligned_cols=44 Identities=11% Similarity=0.114 Sum_probs=32.1
Q ss_pred cEEEecCCCChhhHHHHHhhccE--EEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 342 RVAFRTMWLSAEDYPLLLGSADL--GVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 342 ~V~f~g~~v~~ed~~~~l~~aDl--~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
|+...+ |+|..+ +|+.+++ ||+ | .| -+.+.|++++|+|+|+--.
T Consensus 354 ~~~v~~-~~pq~~---~L~h~~~~~~vt-h---~G---~~s~~Eal~~GvP~i~~P~ 399 (482)
T 2pq6_A 354 RGLIAS-WCPQDK---VLNHPSIGGFLT-H---CG---WNSTTESICAGVPMLCWPF 399 (482)
T ss_dssp TEEEES-CCCHHH---HHTSTTEEEEEE-C---CC---HHHHHHHHHHTCCEEECCC
T ss_pred CEEEEe-ecCHHH---HhcCCCCCEEEe-c---CC---cchHHHHHHcCCCEEecCc
Confidence 888886 998764 7866555 663 2 12 3579999999999998543
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0035 Score=60.49 Aligned_cols=103 Identities=17% Similarity=0.147 Sum_probs=70.4
Q ss_pred CCCCeEEEEecc-CCCCCChH--HHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHH
Q 015058 255 PNRPALVVSSTS-WTPDEDFG--ILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 331 (414)
Q Consensus 255 ~~~~~~i~~vgr-l~~~Kg~~--~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l 331 (414)
.+++.+++..|. ..+.|... .+.++++.+.+ . +++++++|...+++..
T Consensus 178 ~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~----------------------------~-~~~vvl~g~~~e~~~~ 228 (348)
T 1psw_A 178 SERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID----------------------------E-GYQVVLFGSAKDHEAG 228 (348)
T ss_dssp SSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH----------------------------T-TCEEEECCCGGGHHHH
T ss_pred CCCcEEEEECCCCccccCCCCHHHHHHHHHHHHH----------------------------C-CCeEEEEeChhhHHHH
Confidence 345667778777 65655554 88888888764 1 5788898866665555
Q ss_pred HHHHHHcCC---CcE-EEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEee
Q 015058 332 EEKIRRLRL---KRV-AFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLW 395 (414)
Q Consensus 332 ~~~i~~l~l---~~V-~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~ 395 (414)
++..+..+- .++ .+.| ..+-.++..+++.||++|... +| |+ --|.|.|+|+|+..
T Consensus 229 ~~i~~~~~~~~~~~~~~l~g-~~sl~e~~ali~~a~l~I~~D---sg---~~--HlAaa~g~P~v~lf 287 (348)
T 1psw_A 229 NEILAALNTEQQAWCRNLAG-ETQLDQAVILIAACKAIVTND---SG---LM--HVAAALNRPLVALY 287 (348)
T ss_dssp HHHHTTSCHHHHTTEEECTT-TSCHHHHHHHHHTSSEEEEES---SH---HH--HHHHHTTCCEEEEE
T ss_pred HHHHHhhhhccccceEeccC-cCCHHHHHHHHHhCCEEEecC---CH---HH--HHHHHcCCCEEEEE
Confidence 554433321 134 5555 788999999999999999642 22 33 33999999999854
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0069 Score=58.65 Aligned_cols=66 Identities=9% Similarity=0.067 Sum_probs=51.1
Q ss_pred EEEEEcCCC-ChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 318 LFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 318 ~liI~G~G~-~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
-.+|+|.|. ..+++++.+++. .++.+.+ ..++++.+|++||+.|+. + | +.+.|++++|+|.|.-..
T Consensus 186 i~vv~G~~~~~~~~l~~~~~~~--~~v~v~~---~~~~m~~~m~~aDlvI~~-----g-G--~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 186 ISIATSSSNPNLKKLQKFAKLH--NNIRLFI---DHENIAKLMNESNKLIIS-----A-S--SLVNEALLLKANFKAICY 252 (282)
T ss_dssp EEEEECTTCTTHHHHHHHHHTC--SSEEEEE---SCSCHHHHHHTEEEEEEE-----S-S--HHHHHHHHTTCCEEEECC
T ss_pred EEEEECCCchHHHHHHHHHhhC--CCEEEEe---CHHHHHHHHHHCCEEEEC-----C-c--HHHHHHHHcCCCEEEEeC
Confidence 346788874 567777776543 3899988 678999999999999963 1 2 479999999999998543
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.22 Score=50.68 Aligned_cols=44 Identities=14% Similarity=-0.031 Sum_probs=33.8
Q ss_pred cEEEecCCCChhhHHHHHh--hccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 342 RVAFRTMWLSAEDYPLLLG--SADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 342 ~V~f~g~~v~~ed~~~~l~--~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
|+...+ |+|.. .+|+ ++|+||+ | .| -+.+.|++++|+|+|+--.
T Consensus 326 ~~~v~~-w~pq~---~vL~h~~~~~fvt-h---~G---~~S~~Eal~~GvP~i~~P~ 371 (456)
T 2c1x_A 326 YGMVVP-WAPQA---EVLAHEAVGAFVT-H---CG---WNSLWESVAGGVPLICRPF 371 (456)
T ss_dssp TEEEES-CCCHH---HHHTSTTEEEEEE-C---CC---HHHHHHHHHHTCCEEECCC
T ss_pred ceEEec-CCCHH---HHhcCCcCCEEEe-c---CC---cchHHHHHHhCceEEecCC
Confidence 788886 99874 5688 8899995 2 12 3578999999999998543
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.015 Score=62.83 Aligned_cols=190 Identities=11% Similarity=0.082 Sum_probs=104.7
Q ss_pred HhhcCCeEEEEEcCcchhhhhhccCCC----cHHHHHHHHHHHHHhccCCEEEEeCHHHHHHHHHhhCCc-EEEecCC-C
Q 015058 123 SSLRRSAFIVDWHNFGYTLLSLSLGRR----SHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-P 196 (414)
Q Consensus 123 ~~~~~~~~Iv~~H~~~~~l~~~~~~~~----~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~~l~~~~gi~-i~vI~n~-~ 196 (414)
.+..+..+|-+||+.+..-.+...... .......+.+.+ ..+..|.+++.|+.+.+.+++.++.+ -.++.-| |
T Consensus 432 ~k~~~~~~iq~wHG~~lK~~g~d~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~P 510 (729)
T 3l7i_A 432 NKKENQTYIQTWHGTPLKRLANDMKVVRMPGTTTPKYKRNFNR-ETSRWDYLISPNRYSTEIFRSAFWMDEERILEIGYP 510 (729)
T ss_dssp CCCTTCEEEECCSSCCSBCCGGGCSCCCCTTCCHHHHHHHHHH-HHTTCSEEEESSHHHHHHHHHHTCCCGGGEEESCCG
T ss_pred ccCCCcEEEECCCCCchhhccccccccccccccCHHHHHHHHH-hhccCCEEEeCCHHHHHHHHHHhCCCcceEEEcCCC
Confidence 344567778899998542222111100 111111111111 23678999999999999999888886 3344444 3
Q ss_pred C-C-Cc-CCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeEEEEeccCCCCCC-
Q 015058 197 P-E-FF-HPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDED- 272 (414)
Q Consensus 197 ~-~-~f-~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg- 272 (414)
- + .| .+...+.+.++++++ +++++++ +|+|+-.|++..-
T Consensus 511 R~D~l~~~~~~~~~~~~~~~~~------------------------------------~~~~~kk-~ILyaPT~r~~~~~ 553 (729)
T 3l7i_A 511 RNDVLVNRANDQEYLDEIRTHL------------------------------------NLPSDKK-VIMYAPTWRDDEFV 553 (729)
T ss_dssp GGHHHHHSTTCHHHHHHHHHHT------------------------------------TCCSSCE-EEEECCCCCGGGCC
T ss_pred chHHHhcccchHHHHHHHHHHh------------------------------------CCCCCCe-EEEEeeeeeCCccc
Confidence 1 1 22 222323345566554 3455664 8999988887521
Q ss_pred --------hHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHHHcCCC-cE
Q 015058 273 --------FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLK-RV 343 (414)
Q Consensus 273 --------~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~l~l~-~V 343 (414)
...-++.+.. .+ .++..+++-. . ..+.+.....+.+ .+
T Consensus 554 ~~~~~~~~~~~~~~~l~~----------------------~l-------~~~~~li~r~--H--p~~~~~~~~~~~~~~~ 600 (729)
T 3l7i_A 554 SKGKYLFELKIDLDNLYK----------------------EL-------GDDYVILLRM--H--YLISNALDLSGYENFA 600 (729)
T ss_dssp GGGSSCCCCTTCHHHHHH----------------------HH-------TTTEEEEECC--C--HHHHTTCCCTTCTTTE
T ss_pred cccccccchhhHHHHHHH----------------------Hc-------CCCeEEEEec--C--cchhccccccccCCcE
Confidence 1111222211 11 1256666542 1 1111111112334 45
Q ss_pred EEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe
Q 015058 344 AFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL 394 (414)
Q Consensus 344 ~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s 394 (414)
.... ...|+..+|..||+.|+ . ..+.++|++..++|||..
T Consensus 601 ~~~~---~~~di~~ll~~aD~lIT-D-------ySSv~fD~~~l~kPiif~ 640 (729)
T 3l7i_A 601 IDVS---NYNDVSELFLISDCLIT-D-------YSSVMFDYGILKRPQFFF 640 (729)
T ss_dssp EECT---TCSCHHHHHHTCSEEEE-S-------SCTHHHHHGGGCCCEEEE
T ss_pred EeCC---CCcCHHHHHHHhCEEEe-e-------chHHHHhHHhhCCCEEEe
Confidence 5544 56799999999999994 2 233689999999999986
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=96.34 E-value=1.1 Score=45.58 Aligned_cols=99 Identities=12% Similarity=0.043 Sum_probs=58.9
Q ss_pred CCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEE-EcCC--CChHHHH
Q 015058 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII-TGKG--PDKESYE 332 (414)
Q Consensus 256 ~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI-~G~G--~~~e~l~ 332 (414)
+++.++++-|++...-+.+.+.+++..+.+. +.+|+. +|++ ...+.++
T Consensus 275 ~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~-----------------------------~~~~l~~~~~~~~~l~~~~~ 325 (463)
T 2acv_A 275 DKSVVFLCFGSMGVSFGPSQIREIALGLKHS-----------------------------GVRFLWSNSAEKKVFPEGFL 325 (463)
T ss_dssp TTCEEEEECCSSCCCCCHHHHHHHHHHHHHH-----------------------------TCEEEEECCCCGGGSCTTHH
T ss_pred CCceEEEEeccccccCCHHHHHHHHHHHHhC-----------------------------CCcEEEEECCCcccCChhHH
Confidence 4556788889887323434444444444331 356654 5543 1213333
Q ss_pred HHHHHcCCCcEEEecCCCChhhHHHHHh--hccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 333 EKIRRLRLKRVAFRTMWLSAEDYPLLLG--SADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 333 ~~i~~l~l~~V~f~g~~v~~ed~~~~l~--~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
+.... -.++...+ |+|..+ +|+ ++|+||+ | .| -+.+.|++++|+|+|+--.
T Consensus 326 ~~~~~--~~~~~v~~-w~pq~~---vL~h~~~~~fvt-h---~G---~~s~~Eal~~GvP~i~~P~ 378 (463)
T 2acv_A 326 EWMEL--EGKGMICG-WAPQVE---VLAHKAIGGFVS-H---CG---WNSILESMWFGVPILTWPI 378 (463)
T ss_dssp HHHHH--HCSEEEES-SCCHHH---HHHSTTEEEEEE-C---CC---HHHHHHHHHTTCCEEECCC
T ss_pred Hhhcc--CCCEEEEc-cCCHHH---HhCCCccCeEEe-c---CC---chhHHHHHHcCCCeeeccc
Confidence 33310 12778886 998754 575 7899995 2 12 3579999999999998543
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=96.15 E-value=0.072 Score=58.71 Aligned_cols=128 Identities=16% Similarity=0.059 Sum_probs=82.6
Q ss_pred cCCCCCeEEEEeccCCCCCChHHH-HHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCC-ChHH
Q 015058 253 LKPNRPALVVSSTSWTPDEDFGIL-LEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-DKES 330 (414)
Q Consensus 253 l~~~~~~~i~~vgrl~~~Kg~~~L-leA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~-~~e~ 330 (414)
++|+.+ +++.+.|++++|+++.+ +..+..+.+ |.++.+.....++|++.|+|. .-+.
T Consensus 546 vdpd~l-~~g~vkRl~eYKRq~L~~l~~i~~~~~--------------------i~~~~~~~~~p~q~If~GKA~P~y~~ 604 (824)
T 2gj4_A 546 INPNSL-FDVQVKRIHEYKRQLLNCLHVITLYNR--------------------IKKEPNKFVVPRTVMIGGKAAPGYHM 604 (824)
T ss_dssp CCTTSE-EEEEESCCCGGGTHHHHHHHHHHHHHH--------------------HHHCTTSCCCCEEEEEECCCCTTCHH
T ss_pred cCCCcc-eEeeeecchhhcchhhHHHHHHHHHHH--------------------HHhCCCCCCCCEEEEEEEeCCHhHHH
Confidence 456664 89999999999999997 787777642 111111111258999999995 3222
Q ss_pred -------HHHHHHHc------CCC-cEEEecCCCChhhHHHHHhhccEEEeeccCC---CCCCCchhHHHHHHcCCeEEE
Q 015058 331 -------YEEKIRRL------RLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS---SGLDLPMKVCYCWYSRYSLKL 393 (414)
Q Consensus 331 -------l~~~i~~l------~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~---~g~~lP~kl~Eama~G~Pvi~ 393 (414)
+.+.++.. +=. +|.|+- --..+--..++++||++..+++.+ +|. .=+-+|.-|.+-|+
T Consensus 605 aK~iIkli~~va~~in~Dp~v~~~lKVvFl~-nYdvslA~~I~~gaDv~l~~S~ag~EAsGT----s~MKamlNGaLtig 679 (824)
T 2gj4_A 605 AKMIIKLITAIGDVVNHDPVVGDRLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGT----GNMKFMLNGALTIG 679 (824)
T ss_dssp HHHHHHHHHHHHHHHTTCTTTGGGEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCS----HHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHhccCcccCCceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCch----HHHHHHHcCceEEE
Confidence 22233222 111 699985 347777888999999999775532 343 34667888888887
Q ss_pred eee----------CCcccchhhh
Q 015058 394 LWT----------CSVVGCLFVL 406 (414)
Q Consensus 394 s~~----------~~~~~~~~~~ 406 (414)
+-. +..+|-+|-.
T Consensus 680 tlDGanvEi~e~vG~~Ngf~FG~ 702 (824)
T 2gj4_A 680 TMDGANVEMAEEAGEENFFIFGM 702 (824)
T ss_dssp CSCTTHHHHHHHHCGGGSEECSC
T ss_pred EecCccchhhhccCCCCEEEeCC
Confidence 654 4556766643
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=95.84 E-value=0.5 Score=48.44 Aligned_cols=46 Identities=20% Similarity=0.192 Sum_probs=32.8
Q ss_pred cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 342 ~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
|+...+ |+|. ..+|+.+|++++.+ -.| -+.+.|++++|+|+|+--.
T Consensus 328 ~~~vv~-w~Pq---~~vL~h~~v~~fvt--H~G---~~S~~Eal~~GvP~i~~P~ 373 (454)
T 3hbf_A 328 KGKIVA-WAPQ---VEILKHSSVGVFLT--HSG---WNSVLECIVGGVPMISRPF 373 (454)
T ss_dssp TEEEES-SCCH---HHHHHSTTEEEEEE--CCC---HHHHHHHHHHTCCEEECCC
T ss_pred ceEEEe-eCCH---HHHHhhcCcCeEEe--cCC---cchHHHHHHcCCCEecCcc
Confidence 788886 9986 36888899543221 112 3478999999999998543
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=95.44 E-value=2.7 Score=42.89 Aligned_cols=43 Identities=14% Similarity=0.027 Sum_probs=30.3
Q ss_pred EEEecCCCChhhHHHHHhhccE--EEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 343 VAFRTMWLSAEDYPLLLGSADL--GVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 343 V~f~g~~v~~ed~~~~l~~aDl--~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
+...+ |+|.. .+|+.+|+ ||+ |. | -+.+.|++++|+|+|+--.
T Consensus 341 ~~v~~-w~Pq~---~vL~h~~v~~fvt-Hg---G---~~S~~Eal~~GvP~i~~P~ 385 (480)
T 2vch_A 341 FVIPF-WAPQA---QVLAHPSTGGFLT-HC---G---WNSTLESVVSGIPLIAWPL 385 (480)
T ss_dssp EEEES-CCCHH---HHHHSTTEEEEEE-CC---C---HHHHHHHHHHTCCEEECCC
T ss_pred EEEeC-ccCHH---HHhCCCCcCeEEe-cc---c---chhHHHHHHcCCCEEeccc
Confidence 45544 98865 68888885 442 31 2 3478999999999998443
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=95.42 E-value=0.027 Score=52.83 Aligned_cols=45 Identities=11% Similarity=0.010 Sum_probs=34.8
Q ss_pred cEEEecCCCChhhHHHHHh-hccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 342 RVAFRTMWLSAEDYPLLLG-SADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 342 ~V~f~g~~v~~ed~~~~l~-~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
++...+ ..++++.+|+ .||++|+- .| .+.+.|++++|+|.|.--.
T Consensus 115 ~v~v~~---f~~~m~~~l~~~AdlvIsh----aG---agTv~Eal~~G~P~IvVP~ 160 (224)
T 2jzc_A 115 KVIGFD---FSTKMQSIIRDYSDLVISH----AG---TGSILDSLRLNKPLIVCVN 160 (224)
T ss_dssp EEEECC---SSSSHHHHHHHHCSCEEES----SC---HHHHHHHHHTTCCCCEECC
T ss_pred eEEEee---ccchHHHHHHhcCCEEEEC----Cc---HHHHHHHHHhCCCEEEEcC
Confidence 455554 4589999999 99999952 12 4579999999999988543
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=93.72 E-value=0.099 Score=50.04 Aligned_cols=100 Identities=13% Similarity=0.060 Sum_probs=63.1
Q ss_pred CCeEEEEeccCCCCCC--hHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHH
Q 015058 257 RPALVVSSTSWTPDED--FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK 334 (414)
Q Consensus 257 ~~~~i~~vgrl~~~Kg--~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~ 334 (414)
++.+++..|.=.+.|. .+...+.++.+.+ .+.++++.+.|+...++.+.
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~-----------------------------~~~~vvl~~g~~~e~~~~~~ 228 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLAD-----------------------------SGIRIKLPWGAPHEEERAKR 228 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTT-----------------------------TCCEEEECCSSHHHHHHHHH
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHH-----------------------------CCCcEEEecCCHHHHHHHHH
Confidence 4456665554334444 3467777766642 25778887445544333333
Q ss_pred HHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEee
Q 015058 335 IRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLW 395 (414)
Q Consensus 335 i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~ 395 (414)
+.+ ...++.+.| ..+-.++..+++.||++|+..+ | |+=+ |.|.|+|+|+..
T Consensus 229 i~~-~~~~~~l~g-~~sl~el~ali~~a~l~I~~DS---G---~~Hl--Aaa~g~P~v~lf 279 (326)
T 2gt1_A 229 LAE-GFAYVEVLP-KMSLEGVARVLAGAKFVVSVDT---G---LSHL--TAALDRPNITVY 279 (326)
T ss_dssp HHT-TCTTEEECC-CCCHHHHHHHHHTCSEEEEESS---H---HHHH--HHHTTCCEEEEE
T ss_pred HHh-hCCcccccC-CCCHHHHHHHHHhCCEEEecCC---c---HHHH--HHHcCCCEEEEE
Confidence 433 234567776 7889999999999999996522 2 3333 778999999853
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 414 | |||
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.96 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.95 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.95 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.73 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.65 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.54 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 98.73 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.31 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 98.22 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 98.09 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 97.65 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 97.45 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 97.32 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 96.98 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 96.74 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 94.91 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 88.2 |
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.96 E-value=3.7e-27 Score=231.28 Aligned_cols=322 Identities=15% Similarity=0.022 Sum_probs=196.3
Q ss_pred EEEEEeCCC-C-C-ChHHHH----HHHHHHhhCCCcEEEEecCCCCCCcc-c----------------ccCCCeEEEEee
Q 015058 7 ACVVVLGDL-G-R-SPRMQY----QALSLARQMSLEVDVVAYGGSKPHAA-I----------------LEHPSIHIHTMT 62 (414)
Q Consensus 7 ~~v~~~~d~-~-~-~~r~~~----~a~~La~~~g~eV~vv~~~~~~~~~~-~----------------~~~~~i~i~~v~ 62 (414)
|+|+.++.. . . .||+.. .++.|+++ ||+|+|+++..+....+ + ....++.++++.
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~-Gh~V~Vvtp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASL-GHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIG 79 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHT-TCEEEEEEECTTSSCCEEEEEEECSSSEEEEEEEEEEETTEEEEEEE
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHc-CCEEEEEecCCCccchhhccceeecccccceeeeeeccCCeEEEecC
Confidence 456665542 2 1 355544 45666775 99999999653221110 0 123467777776
Q ss_pred cCCCCCCCC-CCc-hHHHHHHHHHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchh
Q 015058 63 QWPTIPRGL-PKV-LKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYT 140 (414)
Q Consensus 63 ~~~~~~~~~-~~~-~~~~~~l~k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~ 140 (414)
......... ... ...+.............++.+..+...||+||+|++ .+++++.++++..++|+|++.|++...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~---~~~~~~~~~~~~~~~~~v~~~h~~~~~ 156 (437)
T d2bisa1 80 GGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDW---HTVFAGALIKKYFKIPAVFTIHRLNKS 156 (437)
T ss_dssp SSGGGCSCTTCSHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETG---GGHHHHHHHHHHHCCCEEEEESSCCCC
T ss_pred ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCh---hhhhHhhhhhccccCceeEEEeecccc
Confidence 311111101 001 111111111112222233444444567999999987 556667777888899999999997431
Q ss_pred hhh-h---ccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHHHHHHhhC---CcEEEecCC-CCCCcCCCC----h-HH
Q 015058 141 LLS-L---SLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWG---IKATVLYDQ-PPEFFHPTS----L-EE 207 (414)
Q Consensus 141 l~~-~---~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~~l~~~~g---i~i~vI~n~-~~~~f~p~~----~-~~ 207 (414)
... . ..+..........+.++...+.+|.++++++.........++ .++.+++|+ |++.|.|.. . ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~ki~vi~~g~d~~~~~~~~~~~~~~~~ 236 (437)
T d2bisa1 157 KLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDER 236 (437)
T ss_dssp CEEHHHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESCHHHHHHTHHHHGGGTTTEEECCCCCCTTTSCGGGCCSCHHHH
T ss_pred ccchhhhhhccchhhhhHHHHHHHHHHHHhhhhhcccchhhhhhhhhhhccccCceEEEecccccccccccccchhhHHH
Confidence 100 0 000000000001133566667899999999988776554433 338999999 777776531 1 11
Q ss_pred HHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeEEEEeccCC-CCCChHHHHHHHHHhHHH
Q 015058 208 KHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRR 286 (414)
Q Consensus 208 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~-~~Kg~~~LleA~~~l~~~ 286 (414)
+..+++++ ++. +. .+++++||+. ++||++.+++|+..+.++
T Consensus 237 ~~~~~~~~------------------------------------~~~-~~-~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~ 278 (437)
T d2bisa1 237 KKSLLSKF------------------------------------GMD-EG-VTFMFIGRFDRGQKGVDVLLKAIEILSSK 278 (437)
T ss_dssp HHHHHHHT------------------------------------TCC-SC-EEEEEESCBCSSSSCHHHHHHHHHHHTTS
T ss_pred HHhhhhhh------------------------------------hcc-CC-ceEEEeecccccchhHHHHHhhhcccccc
Confidence 22333332 222 33 4899999996 579999999999987531
Q ss_pred HhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEE
Q 015058 287 VAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLG 365 (414)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~ 365 (414)
...|+++|+|+|+|+............... ++.|. +++++++++.++++||++
T Consensus 279 -------------------------~~~~~~~lvi~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~adi~ 332 (437)
T d2bisa1 279 -------------------------KEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVIT-EMLSREFVRELYGSVDFV 332 (437)
T ss_dssp -------------------------GGGGGEEEEEECCBCHHHHHHHHHHHHTCTTEEEEC-SCCCHHHHHHHHTTCSEE
T ss_pred -------------------------cccccceeeeecccccccccchhhhccccccceecc-ccCcHHHHHHHHhhhccc
Confidence 025789999999997654332222233444 55555 599999999999999999
Q ss_pred EeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 366 VCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 366 V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
++++ ..+++|++++|||+||+|||+++++|.
T Consensus 333 v~~s---~~e~~~~~~~Eama~G~Pvi~~~~g~~ 363 (437)
T d2bisa1 333 IIPS---YFEPFGLVALEAMCLGAIPIASAVGGL 363 (437)
T ss_dssp EECC---SCCSSCHHHHHHHTTTCEEEEESCTTH
T ss_pred cccc---cccccchHHHHHHHCCCCEEEeCCCCc
Confidence 9763 346899999999999999999998764
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=6.1e-28 Score=228.81 Aligned_cols=165 Identities=11% Similarity=0.060 Sum_probs=133.1
Q ss_pred ccCCEEEEeCHHHHHHHHHhhCCc---EEEecCC-CCCCcCCC-ChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCc
Q 015058 165 KMANGCLCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPT-SLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKAD 239 (414)
Q Consensus 165 k~ad~ii~vS~~~~~~l~~~~gi~---i~vI~n~-~~~~f~p~-~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 239 (414)
..++.+++.++...+.+.+.++.+ +.++||+ +++.+.+. .+..+...++.+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~~~~~~r~~~------------------------ 189 (370)
T d2iw1a1 134 GKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKN------------------------ 189 (370)
T ss_dssp TCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHT------------------------
T ss_pred ccCceEEEecHHHHHHHHHhcCCCcceEEEEEeecccccccccCchhhhhhhhhcc------------------------
Confidence 467899999999888888877765 8899999 66555432 223445555443
Q ss_pred cceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEE
Q 015058 240 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF 319 (414)
Q Consensus 240 ~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~l 319 (414)
++++++ .+++++||+.++||++.+++|++.+.++ .++..+
T Consensus 190 ------------~~~~~~-~~i~~~gr~~~~Kg~~~li~a~~~l~~~---------------------------~~~~~~ 229 (370)
T d2iw1a1 190 ------------GIKEQQ-NLLLQVGSDFGRKGVDRSIEALASLPES---------------------------LRHNTL 229 (370)
T ss_dssp ------------TCCTTC-EEEEEECSCTTTTTHHHHHHHHHTSCHH---------------------------HHHTEE
T ss_pred ------------CCCccc-eEEEEEeccccccchhhhcccccccccc---------------------------ccccee
Confidence 355555 4899999999999999999999998764 345666
Q ss_pred EEEcCCCChHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 320 IITGKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 320 iI~G~G~~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
.++|.|+..++++++++++++. +|+|.| +.+|++.+|++||++|+|+ ..+++|++++|||+||+|||+|+++|
T Consensus 230 ~ii~g~~~~~~~~~~~~~~~~~~~v~~~g---~~~~~~~~~~~adv~v~ps---~~E~~~~~~~EAma~G~PvI~s~~~g 303 (370)
T d2iw1a1 230 LFVVGQDKPRKFEALAEKLGVRSNVHFFS---GRNDVSELMAAADLLLHPA---YQEAAGIVLLEAITAGLPVLTTAVCG 303 (370)
T ss_dssp EEEESSSCCHHHHHHHHHHTCGGGEEEES---CCSCHHHHHHHCSEEEECC---SCCSSCHHHHHHHHHTCCEEEETTST
T ss_pred eeccccccccccccccccccccccccccc---ccccccccccccccccccc---ccccccceeeecccCCeeEEEeCCCC
Confidence 6666667778899999999998 999998 7789999999999999763 35789999999999999999999886
Q ss_pred c
Q 015058 399 V 399 (414)
Q Consensus 399 ~ 399 (414)
.
T Consensus 304 ~ 304 (370)
T d2iw1a1 304 Y 304 (370)
T ss_dssp T
T ss_pred h
Confidence 5
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.95 E-value=2.8e-26 Score=232.48 Aligned_cols=226 Identities=12% Similarity=0.027 Sum_probs=152.0
Q ss_pred CCCcEEEEeCCCCchHHHHHHH--HHhhcCCeEEEEEcCcchhh------hhhccCCCc-HHH------HHHHHHHHHHh
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKW--ASSLRRSAFIVDWHNFGYTL------LSLSLGRRS-HFV------SIYRWIEKYYG 164 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~l--a~~~~~~~~Iv~~H~~~~~l------~~~~~~~~~-~~~------~i~~~~Ek~~~ 164 (414)
.+|||||+|++ .+.+++.+ ..+..++|+|.|.|++.+.. .. ..+... .+. .-....++...
T Consensus 129 ~~pDIvH~h~~---~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (477)
T d1rzua_ 129 WRPDMVHAHDW---QAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFS-KLALPAHAFGMEGIEYYNDVSFLKGGL 204 (477)
T ss_dssp CCCSEEEEEHH---HHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGG-GSCCCGGGSSTTTTEETTEEEHHHHHH
T ss_pred CCCCEEEecch---hHHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHH-HhhcchhhcccccccccchhHHHHHHH
Confidence 58999999985 33322222 23456799999999863211 00 000000 000 00001234455
Q ss_pred ccCCEEEEeCHHHHHHHHHh-hC-----------CcEEEecCC-CCCCcCCCCh----------------HHHHHHHHHh
Q 015058 165 KMANGCLCVTQAMQHELAQN-WG-----------IKATVLYDQ-PPEFFHPTSL----------------EEKHELFCRL 215 (414)
Q Consensus 165 k~ad~ii~vS~~~~~~l~~~-~g-----------i~i~vI~n~-~~~~f~p~~~----------------~~~~~l~~~l 215 (414)
..+|.++++|...++.+... ++ .++.+|+|+ +.+.|.|... ..+.+++.+.
T Consensus 205 ~~ad~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 284 (477)
T d1rzua_ 205 QTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHF 284 (477)
T ss_dssp HHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHH
T ss_pred HhhhhhhhccHHHHHHHHHHhcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhc
Confidence 78999999999887754321 11 137899999 7777766321 0112222221
Q ss_pred hhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCC
Q 015058 216 NKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDD 295 (414)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~ 295 (414)
+++++...+|+++||++++||++.|++|+..+.+
T Consensus 285 ------------------------------------~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~---------- 318 (477)
T d1rzua_ 285 ------------------------------------RIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS---------- 318 (477)
T ss_dssp ------------------------------------TCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH----------
T ss_pred ------------------------------------ccccCCccEEEEEeeeeecCCcHHHHHHHHHHHh----------
Confidence 2333333489999999999999999999999875
Q ss_pred CchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCC
Q 015058 296 STNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG 374 (414)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g 374 (414)
.+.+|+++|.|+.....+.+..+.++. +|.|.+ +.+.++.+.++++||++|+|+ ..
T Consensus 319 -------------------~~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~aD~~v~PS---~~ 375 (477)
T d1rzua_ 319 -------------------LGGRLVVLGAGDVALEGALLAAASRHHGRVGVAI-GYNEPLSHLMQAGCDAIIIPS---RF 375 (477)
T ss_dssp -------------------TTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEE-SCCHHHHHHHHHHCSEEEECC---SC
T ss_pred -------------------hCCeEEEEecCCchHHHHHHHHHhhcCCeEEEEc-ccChhHHHHHHHhCccccCCc---cc
Confidence 157899999998665544444444455 899997 778899999999999999874 35
Q ss_pred CCCchhHHHHHHcCCeEEEeeeCC
Q 015058 375 LDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 375 ~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
|++|.+++||||||+|||+|+++|
T Consensus 376 E~fglv~lEAma~G~PvVas~~GG 399 (477)
T d1rzua_ 376 EPCGLTQLYALRYGCIPVVARTGG 399 (477)
T ss_dssp CSSCSHHHHHHHHTCEEEEESSHH
T ss_pred cCCCHHHHHHHHcCCCEEEcCCCC
Confidence 889999999999999999999876
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.73 E-value=6.5e-18 Score=151.64 Aligned_cols=113 Identities=17% Similarity=0.119 Sum_probs=86.8
Q ss_pred CCCeEEEEeccCC-CCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCCh-HHHHH
Q 015058 256 NRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYEE 333 (414)
Q Consensus 256 ~~~~~i~~vgrl~-~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~-e~l~~ 333 (414)
+.+ +++|+||+. ++||++.+++|++.+.++. .+|+++|+|+|+|+.+ +.+.+
T Consensus 31 ~~~-~il~~Grl~~~~Kg~~~li~a~~~l~~~~-------------------------~~~~~~l~i~G~g~~~~~~~~~ 84 (196)
T d2bfwa1 31 EGV-TFMFIGRFDRGQKGVDVLLKAIEILSSKK-------------------------EFQEMRFIIIGKGDPELEGWAR 84 (196)
T ss_dssp SCE-EEEEESCBCSSSSCHHHHHHHHHHHTTSG-------------------------GGGGEEEEEECCBCHHHHHHHH
T ss_pred CCC-EEEEEcCCCccccCHHHHHHHHHhhhccc-------------------------CCCCeEEEEEeecccchhhhhh
Confidence 443 788999996 6899999999999886421 3578999999999653 33333
Q ss_pred HHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 334 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 334 ~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
.+++ ...++.+.+++++.++++.+|+.||++|+|+. .+++|.+++|||+||+|||++++++
T Consensus 85 ~~~~-~~~~~~~~~~~~~~~~l~~~~~~~di~v~ps~---~e~~~~~~~Eam~~G~pvI~~~~~~ 145 (196)
T d2bfwa1 85 SLEE-KHGNVKVITEMLSREFVRELYGSVDFVIIPSY---FEPFGLVALEAMCLGAIPIASAVGG 145 (196)
T ss_dssp HHHH-HCTTEEEECSCCCHHHHHHHHTTCSEEEECCS---CCSSCHHHHHHHHTTCEEEEESCHH
T ss_pred hhhh-ccceeEEeeeccccccchhccccccccccccc---cccccccchhhhhcCceeeecCCCc
Confidence 3333 34433434459999999999999999998643 4689999999999999999998644
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.65 E-value=1.9e-16 Score=138.74 Aligned_cols=105 Identities=17% Similarity=0.125 Sum_probs=87.9
Q ss_pred EEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCC---ChHHHHHHHH
Q 015058 260 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP---DKESYEEKIR 336 (414)
Q Consensus 260 ~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~---~~e~l~~~i~ 336 (414)
.++|+||+.|+||++.+++|++.+ ++.+++|+|.|+ ..+.+.+.++
T Consensus 14 ~~l~iGrl~~~K~~~~~i~a~~~l-------------------------------~~~~l~ivg~~~~~~~~~~~~~~~~ 62 (166)
T d2f9fa1 14 FWLSVNRIYPEKRIELQLEVFKKL-------------------------------QDEKLYIVGWFSKGDHAERYARKIM 62 (166)
T ss_dssp CEEEECCSSGGGTHHHHHHHHHHC-------------------------------TTSCEEEEBCCCTTSTHHHHHHHHH
T ss_pred EEEEEecCccccCHHHHHHHHHHh-------------------------------cCCeEEEEEecccccchhhhhhhhc
Confidence 466999999999999999999865 356788898765 4555666666
Q ss_pred HcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 337 RLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 337 ~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
+...++|+|+| +++.++++.+|+.||++|+|+ ..+++|.+++|||++|+|||+++.+|.
T Consensus 63 ~~~~~~v~~~g-~~~~~~~~~~~~~ad~~i~ps---~~e~~~~~~~Ea~~~g~pvi~s~~~~~ 121 (166)
T d2f9fa1 63 KIAPDNVKFLG-SVSEEELIDLYSRCKGLLCTA---KDEDFGLTPIEAMASGKPVIAVNEGGF 121 (166)
T ss_dssp HHSCTTEEEEE-SCCHHHHHHHHHHCSEEEECC---SSCCSCHHHHHHHHTTCCEEEESSHHH
T ss_pred ccccCcEEEee-ccccccccccccccccccccc---ccccccccccccccccccceeecCCcc
Confidence 66666999997 999999999999999999763 356899999999999999999987654
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.54 E-value=1.6e-13 Score=139.39 Aligned_cols=224 Identities=8% Similarity=-0.064 Sum_probs=141.8
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhh-cCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~-~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
..-|+|++|++ ..+++..+++.. .+.++.+.+|....+... +........+. +.+ -.+|.|...+...+
T Consensus 121 ~~~d~iwvhDy---hl~llp~~lR~~~~~~~i~~flH~pfP~~~~--fr~lp~~~~il----~~l-l~~d~igf~~~~~~ 190 (456)
T d1uqta_ 121 QDDDIIWIHDY---HLLPFAHELRKRGVNNRIGFFLHIPFPTPEI--FNALPTYDTLL----EQL-CDYDLLGFQTENDR 190 (456)
T ss_dssp CTTCEEEEESG---GGTTHHHHHHHTTCCSCEEEECCSCCCCHHH--HTTSTTHHHHH----HHH-TTSSEEEESSHHHH
T ss_pred cCCCeEEEecc---chhhhHHHHHHhCCCCcEEEEeCCCCCChHH--hccCcchHHHH----HHh-hccccccccCHHHH
Confidence 45589999987 444444454543 467888888875221111 11111111221 122 37899999998877
Q ss_pred HHHHHh----hCC---------------cEEEecCC-CCCCcCCC----ChHHHHHHHHHhhhhccCCCCccccccCCCC
Q 015058 179 HELAQN----WGI---------------KATVLYDQ-PPEFFHPT----SLEEKHELFCRLNKILHQPLGVQDCVSNGME 234 (414)
Q Consensus 179 ~~l~~~----~gi---------------~i~vI~n~-~~~~f~p~----~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 234 (414)
+...+- .+. ++.++|+| |++.|.+. ..+...+++.+
T Consensus 191 ~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~~~~~~~l~~~-------------------- 250 (456)
T d1uqta_ 191 LAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAE-------------------- 250 (456)
T ss_dssp HHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHH--------------------
T ss_pred HHHHHHHHHHhCcccccCCeEEecCceeeeeeecCcccchhhhhhcccHHHHHHHHHHHh--------------------
Confidence 665431 111 14567777 55555321 11112222222
Q ss_pred CCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCC
Q 015058 235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY 314 (414)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (414)
..++ .+|+++||+.+.||++.+++|++++.++.+ | ..
T Consensus 251 -------------------~~~~-~~il~V~Rld~~KGi~~~l~A~~~~l~~~p-------------------~----~~ 287 (456)
T d1uqta_ 251 -------------------LKNV-QNIFSVERLDYSKGLPERFLAYEALLEKYP-------------------Q----HH 287 (456)
T ss_dssp -------------------TTTC-EEEEEECCBCGGGCHHHHHHHHHHHHHHCG-------------------G----GT
T ss_pred -------------------cCCC-eEEEEeCCCchhhchHHHHHHHHHHHHhCc-------------------c----cc
Confidence 1245 499999999999999999999999876421 0 11
Q ss_pred CcEEEEEEcCCCCh---------HHHHHHHHH-------cCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCC
Q 015058 315 PRLLFIITGKGPDK---------ESYEEKIRR-------LRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDL 377 (414)
Q Consensus 315 p~i~liI~G~G~~~---------e~l~~~i~~-------l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~l 377 (414)
.++.++++|.|+.. .++++++.+ .++. .+.+.+ .++.+++..+|++||+++++ +..+|+
T Consensus 288 ~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~-~~~~~~l~a~~~~Adv~v~~---s~~EG~ 363 (456)
T d1uqta_ 288 GKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQ-HFDRKLLMKIFRYSDVGLVT---PLRDGM 363 (456)
T ss_dssp TTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECS-CCCHHHHHHHHHHCSEEEEC---CSSBSC
T ss_pred ccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccC-CcCHHHHhHHHhhhceeecC---CccCCC
Confidence 24778888876532 122222322 3566 567765 89999999999999999975 345789
Q ss_pred chhHHHHHHcCCe-----EEEeeeCCcc
Q 015058 378 PMKVCYCWYSRYS-----LKLLWTCSVV 400 (414)
Q Consensus 378 P~kl~Eama~G~P-----vi~s~~~~~~ 400 (414)
|.+++||||||.| +|+|+.+|..
T Consensus 364 ~lv~~Ea~a~~~p~~~g~lIlS~~~G~~ 391 (456)
T d1uqta_ 364 NLVAKEYVAAQDPANPGVLVLSQFAGAA 391 (456)
T ss_dssp CHHHHHHHHHSCTTSCCEEEEETTBGGG
T ss_pred CcHHHHHHHhCCCCCCCcEEEeCCCCCH
Confidence 9999999999999 9999998764
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=98.73 E-value=5.1e-07 Score=83.98 Aligned_cols=68 Identities=15% Similarity=0.107 Sum_probs=44.1
Q ss_pred EEEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe
Q 015058 317 LLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL 394 (414)
Q Consensus 317 i~liI~G~G~~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s 394 (414)
...++.+.............+..-.++...+ ..+++..+|+.||++|+- .| .+.+.|++++|+|+|..
T Consensus 207 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~---f~~~~~~lm~~adl~It~----~G---~~T~~Eal~~g~P~I~i 274 (351)
T d1f0ka_ 207 VTIWHQSGKGSQQSVEQAYAEAGQPQHKVTE---FIDDMAAAYAWADVVVCR----SG---ALTVSEIAAAGLPALFV 274 (351)
T ss_dssp EEEEEECCTTCHHHHHHHHHHTTCTTSEEES---CCSCHHHHHHHCSEEEEC----CC---HHHHHHHHHHTCCEEEC
T ss_pred ceeeeeccccchhhhhhhhcccccccceeee---ehhhHHHHHHhCchhhcc----cc---chHHHHHHHhCCceeee
Confidence 3445555444443333333332333666666 467899999999999952 22 34689999999999975
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.31 E-value=0.00011 Score=71.23 Aligned_cols=288 Identities=16% Similarity=0.068 Sum_probs=154.7
Q ss_pred CCEEEEEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCCCC-CcccccCCCeEE-EEeecCCCCCCCCCCchHHHHHH
Q 015058 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKP-HAAILEHPSIHI-HTMTQWPTIPRGLPKVLKPVLLL 81 (414)
Q Consensus 4 ~~~~~v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~-~~~~~~~~~i~i-~~v~~~~~~~~~~~~~~~~~~~l 81 (414)
||++++++.+ -+.-..+.-....|.+..++++.++..+.... .....+..+++. +.+. .. .. ... .....
T Consensus 2 MkkI~~v~Gt-R~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~d~~l~--~~-~~-~~s---~~~~~ 73 (373)
T d1v4va_ 2 MKRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLD--VM-QE-RQA---LPDLA 73 (373)
T ss_dssp CEEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSEECC--CC-SS-CCC---HHHHH
T ss_pred CCeEEEEEEh-hHHHHHHHHHHHHHHhCCCCCEEEEEccCChhhhhCcchhcCCCccccCC--CC-CC-CCC---HHHHH
Confidence 6777776654 11224555666778664578988888765321 111122233322 1222 11 11 111 11112
Q ss_pred HHHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHH
Q 015058 82 LKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEK 161 (414)
Q Consensus 82 ~k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek 161 (414)
...+.++ ..++ +..+||+|+++.-. ...+++.+++...++|++. +|+=..+- +. ..+..-...| +
T Consensus 74 ~~~~~~~----~~~l-~~~kPD~vlv~GDr--~e~la~a~aa~~~~ipi~H-iegG~rsg---~~-~~~~~de~~R---~ 138 (373)
T d1v4va_ 74 ARILPQA----ARAL-KEMGADYVLVHGDT--LTTFAVAWAAFLEGIPVGH-VEAGLRSG---NL-KEPFPEEANR---R 138 (373)
T ss_dssp HHHHHHH----HHHH-HHTTCSEEEEESSC--HHHHHHHHHHHHTTCCEEE-ETCCCCCS---CT-TSSTTHHHHH---H
T ss_pred HHHHHHH----hhhh-hhcCcccccccccC--ccchhHHHHHHHhhhhhee-eccccccc---cc-ccCcchhhhh---h
Confidence 2222222 1222 34899999999752 4455667778888999864 34311100 00 0111112222 3
Q ss_pred HHhccCCEEEEeCHHHHHHHHHhhCCc---EEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCC
Q 015058 162 YYGKMANGCLCVTQAMQHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238 (414)
Q Consensus 162 ~~~k~ad~ii~vS~~~~~~l~~~~gi~---i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 238 (414)
...+.||.-+|.++..++.|.+. |.+ +.++ |++. .+.-... .++...
T Consensus 139 ~iskls~~hf~~t~~~~~~L~~~-Ge~~~~I~~v--G~p~------~D~i~~~-~~~~~~-------------------- 188 (373)
T d1v4va_ 139 LTDVLTDLDFAPTPLAKANLLKE-GKREEGILVT--GQTG------VDAVLLA-AKLGRL-------------------- 188 (373)
T ss_dssp HHHHHCSEEEESSHHHHHHHHTT-TCCGGGEEEC--CCHH------HHHHHHH-HHHCCC--------------------
T ss_pred hhccccceeeecchhhhhhhhhh-cccccceeec--ccch------hhHHHhh-hhhccc--------------------
Confidence 55689999999999999999875 876 4444 2210 0111111 111100
Q ss_pred ccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEE
Q 015058 239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL 318 (414)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~ 318 (414)
.... ++.++++++.-|-...+....+.+++..+.+. .+++.
T Consensus 189 -----------~~~~-~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~---------------------------~~~~~ 229 (373)
T d1v4va_ 189 -----------PEGL-PEGPYVTVTMHRRENWPLLSDLAQALKRVAEA---------------------------FPHLT 229 (373)
T ss_dssp -----------CTTC-CSSCEEEECCCCGGGGGGHHHHHHHHHHHHHH---------------------------CTTSE
T ss_pred -----------cccc-ccccceeEEeccccccchHHHHHHHHHHHhhh---------------------------cccce
Confidence 0012 23345666655555555566677777666542 44566
Q ss_pred EEEEcCCCChHHHHHHH-HHc-CCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe
Q 015058 319 FIITGKGPDKESYEEKI-RRL-RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL 394 (414)
Q Consensus 319 liI~G~G~~~e~l~~~i-~~l-~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s 394 (414)
+++... +. ......+ +.. ..+++.+.. .++..++-.++..|++.+. .|++ -+.||.+.|+|+|.-
T Consensus 230 ~i~p~~-~~-~~~~~~~~~~~~~~~n~~~~~-~l~~~~~l~ll~~s~~vig---nSss-----gi~Ea~~lg~P~Ini 296 (373)
T d1v4va_ 230 FVYPVH-LN-PVVREAVFPVLKGVRNFVLLD-PLEYGSMAALMRASLLLVT---DSGG-----LQEEGAALGVPVVVL 296 (373)
T ss_dssp EEEECC-SC-HHHHHHHHHHHTTCTTEEEEC-CCCHHHHHHHHHTEEEEEE---SCHH-----HHHHHHHTTCCEEEC
T ss_pred eeeeec-cc-ccchhhhhhhhcccccceeec-cchHHHHHHHhhhceeEec---ccch-----hhhcchhhcCcEEEe
Confidence 665432 22 2222222 222 334899996 8899999999999999883 2322 378999999999965
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.22 E-value=3.8e-06 Score=78.62 Aligned_cols=47 Identities=4% Similarity=-0.082 Sum_probs=36.9
Q ss_pred cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 342 ~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
+|.+.+ |++. +.+|+.+|++|+. .| .+.+.|||++|+|+|+.-..++
T Consensus 271 ~v~i~~-~~p~---~~ll~~a~~~v~h----gG---~~t~~Eal~~G~P~v~~P~~~d 317 (391)
T d1pn3a_ 271 DCFVVG-EVNL---QELFGRVAAAIHH----DS---AGTTLLAMRAGIPQIVVRRVVD 317 (391)
T ss_dssp TCCEES-SCCH---HHHHTTSSCEEEE----SC---HHHHHHHHHHTCCEEEECSSCC
T ss_pred CEEEec-ccCH---HHHHhhccEEEec----Cc---hHHHHHHHHhCCcEEEeccccC
Confidence 899987 8874 5578999999953 12 4579999999999999766554
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.09 E-value=0.00014 Score=67.77 Aligned_cols=46 Identities=4% Similarity=-0.171 Sum_probs=36.1
Q ss_pred cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 342 ~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
||.+.+ |+|. ..+|..+|++|+ | +-.+.+.||+++|+|+|+.-..+
T Consensus 287 ~v~~~~-~~p~---~~ll~~~~~~I~-h------gG~~t~~Eal~~GvP~l~~P~~~ 332 (401)
T d1rrva_ 287 DCFAID-EVNF---QALFRRVAAVIH-H------GSAGTEHVATRAGVPQLVIPRNT 332 (401)
T ss_dssp TEEEES-SCCH---HHHGGGSSEEEE-C------CCHHHHHHHHHHTCCEEECCCSB
T ss_pred CEEEEe-ccCc---HHHhhhccEEEe-c------CCchHHHHHHHhCCCEEEecccc
Confidence 899996 9874 556889999995 2 12457999999999999865554
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=97.65 E-value=0.003 Score=60.99 Aligned_cols=282 Identities=14% Similarity=0.055 Sum_probs=144.8
Q ss_pred hHHHHHHHHHHhhCCCcEEEEecCCCCC-CcccccCCCeE-EEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHh
Q 015058 19 PRMQYQALSLARQMSLEVDVVAYGGSKP-HAAILEHPSIH-IHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLC 96 (414)
Q Consensus 19 ~r~~~~a~~La~~~g~eV~vv~~~~~~~-~~~~~~~~~i~-i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~ 96 (414)
..+......|.++.++++.++..+.... ..+..+..++. -+.+. .... .. .......+.+..+-..
T Consensus 14 ~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~~~~~~~~~--~~~~--~~---~~~~~~~~~i~~~~~~----- 81 (376)
T d1f6da_ 14 IKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLN--IMQP--GQ---GLTEITCRILEGLKPI----- 81 (376)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEECCTTGGGGHHHHHHTTCCCSEECC--CCSS--SS---CHHHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHhcCCCCCcccc--cCCC--CC---CHHHHHHHHHHhhHHH-----
Confidence 4455566788775578999988765321 11111222221 12222 1100 11 1111222223222111
Q ss_pred hhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCC-CcHHHHHHHHHHHHHhccCCEEEEeCH
Q 015058 97 VKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR-RSHFVSIYRWIEKYYGKMANGCLCVTQ 175 (414)
Q Consensus 97 ~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~-~~~~~~i~~~~Ek~~~k~ad~ii~vS~ 175 (414)
++..+||+|+++.-. ...+++.+++...++|++. +|+=.- +.+- ....--..| ....+.||.-+|.++
T Consensus 82 ~~~~kPD~v~v~GDr--~e~la~a~aa~~~~ipi~H-iegG~~-----s~~~~~~~pde~~R---~~iskls~~hf~~~~ 150 (376)
T d1f6da_ 82 LAEFKPDVVLVHGDT--TTTLATSLAAFYQRIPVGH-VEAGLR-----TGDLYSPWPEEANR---TLTGHLAMYHFSPTE 150 (376)
T ss_dssp HHHHCCSEEEEETTC--HHHHHHHHHHHTTTCCEEE-ESCCCC-----CSCTTSSTTHHHHH---HHHHHTCSEEEESSH
T ss_pred HHhccCcceeeeccc--cchhhHHHHHHhhCceEEE-Eecccc-----cccccccCchhhhh---hhhccceeEEEeccH
Confidence 123799999999752 4556677778889999864 444111 0110 111112222 355689999999999
Q ss_pred HHHHHHHHhhCCc---EEEecCCCCCCcC---CCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeecccc
Q 015058 176 AMQHELAQNWGIK---ATVLYDQPPEFFH---PTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGI 249 (414)
Q Consensus 176 ~~~~~l~~~~gi~---i~vI~n~~~~~f~---p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (414)
..++.|.+. |.+ +.++=|...+.+. +... ........... .
T Consensus 151 ~~~~~L~~~-G~~~~~I~~vG~~~~D~l~~~~~~~~-~~~~~~~~~~~-------------------------------~ 197 (376)
T d1f6da_ 151 TSRQNLLRE-NVADSRIFITGNTVIDALLWVRDQVM-SSDKLRSELAA-------------------------------N 197 (376)
T ss_dssp HHHHHHHHT-TCCGGGEEECCCHHHHHHHHHHHHTT-TCHHHHHHHHT-------------------------------T
T ss_pred HHHhHHHhc-CCCccccceecCchHHHHHHHHhhhh-ccchhhhhhhc-------------------------------c
Confidence 999999875 876 5555332111110 0000 00001100000 0
Q ss_pred ccccCCCCCeEEEEeccCC-CCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCCh
Q 015058 250 DVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 328 (414)
Q Consensus 250 ~~~l~~~~~~~i~~vgrl~-~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~ 328 (414)
...+..+.++++++.=|.+ ..+.+..+++++..+.+. ..++.+++.-. +.
T Consensus 198 ~~~~~~~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~---------------------------~~~~~ii~p~~-~~- 248 (376)
T d1f6da_ 198 YPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATT---------------------------HQDIQIVYPVH-LN- 248 (376)
T ss_dssp CTTCCTTSEEEEECCCCBSSCCHHHHHHHHHHHHHHHH---------------------------CTTEEEEEECC-BC-
T ss_pred ccccCCCCceEEEecccchhhhhhHHHHHHHHhhhhhh---------------------------cceeEEecccc-cc-
Confidence 0112233444555432222 334455666666655542 34566665532 22
Q ss_pred HHHHHHH-HHcC-CCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe
Q 015058 329 ESYEEKI-RRLR-LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL 394 (414)
Q Consensus 329 e~l~~~i-~~l~-l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s 394 (414)
....... +.+. .+++.+.. .++..++-.++..|++.+. .|+++ +.||-+.|+|+|.-
T Consensus 249 ~~~~~~~~~~~~~~~ni~~~~-~l~~~~fl~ll~~a~~vig--nSssg------i~Ea~~lg~P~Ini 307 (376)
T d1f6da_ 249 PNVREPVNRILGHVKNVILID-PQEYLPFVWLMNHAWLILT--DSGGI------QEEAPSLGKPVLVM 307 (376)
T ss_dssp HHHHHHHHHHHTTCTTEEEEC-CCCHHHHHHHHHHCSEEEE--SSSGG------GGTGGGGTCCEEEC
T ss_pred hhhhhhHhhhhcccccceeec-cccHHHHHHHHhhceEEEe--cCcch------HhhHHHhCCCEEEc
Confidence 2222222 2223 34899996 7899999999999999983 23332 57999999999965
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=97.45 E-value=0.0088 Score=57.39 Aligned_cols=208 Identities=13% Similarity=0.021 Sum_probs=109.1
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCC-CcHHHHHHHHHHHHHhccCCEEEEeCHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR-RSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~-~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~ 177 (414)
..+||+|+++.-. ...+++.+++...++|++. +|+=..+ .+. ....--..| +...+.||..+|.++..
T Consensus 86 ~~kpD~v~v~GDr--~e~la~a~aa~~~~Ipi~H-iegG~~s-----~~~~~~~~de~~R---~~iskls~~hf~~t~~~ 154 (377)
T d1o6ca_ 86 DIKPDIVLVHGDT--TTTFAGSLAAFYHQIAVGH-VEAGLRT-----GNKYSPFPEELNR---QMTGAIADLHFAPTGQA 154 (377)
T ss_dssp HHCCSEEEEETTC--HHHHHHHHHHHHTTCEEEE-ESCCCCC-----SCTTTTTTHHHHH---HHHHHHCSEEEESSHHH
T ss_pred hcccceeEeeecc--cccchhhhhhhhccceEEE-Eeccccc-----ccccccCchhhhc---cccccceeEEeecchhh
Confidence 3799999999752 4456677788889999854 4431111 111 011112222 35568999999999999
Q ss_pred HHHHHHhhCCc---EEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccC
Q 015058 178 QHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (414)
Q Consensus 178 ~~~l~~~~gi~---i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 254 (414)
++.|.+. |.+ +.++=|.- -+.+...... ......+ ...
T Consensus 155 ~~~L~~~-G~~~~~I~~vG~~~-----------~D~i~~~~~~-------------------~~~~~~~--------~~~ 195 (377)
T d1o6ca_ 155 KDNLLKE-NKKADSIFVTGNTA-----------IDALNTTVRD-------------------GYSHPVL--------DQV 195 (377)
T ss_dssp HHHHHHT-TCCGGGEEECCCHH-----------HHHHHHHCCS-------------------SCCCSTT--------TTT
T ss_pred hhhhhhh-ccccceEeeccchh-----------HHHHHHHHHH-------------------HHhhhhh--------hhc
Confidence 9999875 876 44442210 1111111000 0000000 111
Q ss_pred CCCCeEEEEeccCCCC-CChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHH
Q 015058 255 PNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (414)
Q Consensus 255 ~~~~~~i~~vgrl~~~-Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~ 333 (414)
.+.++++++.-|-+.. +.....++++..+.. ..+++.+++...... ....
T Consensus 196 ~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~i~~~~~~~--~~~~ 246 (377)
T d1o6ca_ 196 GEDKMILLTAHRRENLGEPMENMFKAIRRIVG---------------------------EFEDVQVVYPVHLNP--VVRE 246 (377)
T ss_dssp TTSEEEEECC----------HHHHHHHHHHHH---------------------------HCTTEEEEEC----C--HHHH
T ss_pred cCCceEEEEeccccccccchHHHHHHHHhhcc---------------------------ccccccccccccccc--ccch
Confidence 1223455544333322 112233333333332 134566655433222 2333
Q ss_pred HHHH-cCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe
Q 015058 334 KIRR-LRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL 394 (414)
Q Consensus 334 ~i~~-l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s 394 (414)
.+.+ +... +|.+.. .++.+++-.++..|++.|. .|++ -+.||-+.|+|+|..
T Consensus 247 ~~~~~~~~~~ni~~~~-~l~~~~fl~llk~s~~vIg--nSss------~i~Ea~~lg~P~Ini 300 (377)
T d1o6ca_ 247 AAHKHFGDSDRVHLIE-PLEVIDFHNFAAKSHFILT--DSGG------VQEEAPSLGKPVLVL 300 (377)
T ss_dssp HHHHC--CCSSEEECC-CCCHHHHHHHHHHCSEEEE--C--C------HHHHGGGGTCCEEEE
T ss_pred hhhhccccccceEecc-ccchHHHHHHHhhhheeec--ccch------hHHhhhhhhceEEEe
Confidence 3333 3333 899996 8999999999999999883 2332 379999999999986
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=97.32 E-value=0.0015 Score=59.99 Aligned_cols=46 Identities=9% Similarity=-0.131 Sum_probs=36.1
Q ss_pred cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 342 ~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
||.+.+ |++. +.+|..+|++|+- +-.+.+.||+++|+|+|+.-..+
T Consensus 286 nv~~~~-~~p~---~~~l~~~~~~V~h-------gG~~t~~Eal~~GvP~v~~P~~~ 331 (401)
T d1iira_ 286 DCFAIG-EVNH---QVLFGRVAAVIHH-------GGAGTTHVAARAGAPQILLPQMA 331 (401)
T ss_dssp GEEECS-SCCH---HHHGGGSSEEEEC-------CCHHHHHHHHHHTCCEEECCCST
T ss_pred CEEEEe-ccCH---HHHHhhcCEEEec-------CCchHHHHHHHhCCCEEEccccc
Confidence 899986 8864 5678999999952 23568999999999999965444
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=96.98 E-value=0.036 Score=51.90 Aligned_cols=71 Identities=11% Similarity=-0.013 Sum_probs=43.1
Q ss_pred EEEEEEcCCCChHHHHH-HHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEee
Q 015058 317 LLFIITGKGPDKESYEE-KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLW 395 (414)
Q Consensus 317 i~liI~G~G~~~e~l~~-~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~ 395 (414)
.++++...+..+..+-+ ...+ .-.||.... |+|..++- ....+|+||. |. | -+.+.||+++|+|+|+.-
T Consensus 295 ~~vl~~~~~~~~~~l~~~~~~~-~~~nv~~~~-~~pq~~lL-~hp~~~~fIt-HG---G---~~s~~eal~~GvP~v~~P 364 (450)
T d2c1xa1 295 VPFIWSLRDKARVHLPEGFLEK-TRGYGMVVP-WAPQAEVL-AHEAVGAFVT-HC---G---WNSLWESVAGGVPLICRP 364 (450)
T ss_dssp CCEEEECCGGGGGGSCTTHHHH-HTTTEEEES-CCCHHHHH-TSTTEEEEEE-CC---C---HHHHHHHHHHTCCEEECC
T ss_pred CeEEEEECCCccccCChhhhhh-ccccccccc-cCChHhhh-ccCceeEEEc-cC---C---ccHHHHHHHcCCCEEecc
Confidence 45666554444332211 1111 123888885 98887643 2478899994 32 2 236899999999999854
Q ss_pred eC
Q 015058 396 TC 397 (414)
Q Consensus 396 ~~ 397 (414)
..
T Consensus 365 ~~ 366 (450)
T d2c1xa1 365 FF 366 (450)
T ss_dssp CS
T ss_pred cc
Confidence 43
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| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=96.74 E-value=0.22 Score=46.00 Aligned_cols=48 Identities=8% Similarity=-0.039 Sum_probs=35.5
Q ss_pred cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 342 ~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
++.+.. |.+..++. .+..+|+||. | .| -+.+.||+++|+|+|+.-..+
T Consensus 331 n~~v~~-~~pq~~~l-~~p~~~~fIt-H---GG---~gs~~eAl~~GVP~l~~P~~~ 378 (461)
T d2acva1 331 KGMICG-WAPQVEVL-AHKAIGGFVS-H---CG---WNSILESMWFGVPILTWPIYA 378 (461)
T ss_dssp SEEEES-SCCHHHHH-HSTTEEEEEE-C---CC---HHHHHHHHHTTCCEEECCCST
T ss_pred CeEEEe-cCCHHHHH-hcccCCEEEe-c---CC---ccHHHHHHHcCCCEEeCCccc
Confidence 777775 87776655 6799999994 2 22 347999999999999954433
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=94.91 E-value=0.021 Score=52.33 Aligned_cols=105 Identities=13% Similarity=0.063 Sum_probs=68.1
Q ss_pred CCCCCeEEEEec-cCCCCC--ChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHH
Q 015058 254 KPNRPALVVSST-SWTPDE--DFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 330 (414)
Q Consensus 254 ~~~~~~~i~~vg-rl~~~K--g~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~ 330 (414)
..+++.+++..| +..+.| ..+..++.+..+.+ + +..++++|.+.+++.
T Consensus 177 ~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~---------------------------~--~~~ivl~g~~~e~~~ 227 (348)
T d1pswa_ 177 SSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID---------------------------E--GYQVVLFGSAKDHEA 227 (348)
T ss_dssp CSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH---------------------------T--TCEEEECCCGGGHHH
T ss_pred ccCCCeEEeccccchhhccccchHHHhhhHHHHhh---------------------------c--CCccccccccchHHH
Confidence 345555666554 544444 35667777777764 1 457888986666555
Q ss_pred HHHHHHHcCC---CcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEee
Q 015058 331 YEEKIRRLRL---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLW 395 (414)
Q Consensus 331 l~~~i~~l~l---~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~ 395 (414)
.++..+.... .++.-+.+..+-.++..+++.||++|+..+. | +-=|.++|+|+|+.-
T Consensus 228 ~~~~~~~~~~~~~~~~~~l~g~~sl~el~~li~~a~l~I~~Dtg------~--~HlAaa~g~p~i~lf 287 (348)
T d1pswa_ 228 GNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDSG------L--MHVAAALNRPLVALY 287 (348)
T ss_dssp HHHHHTTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESSH------H--HHHHHHTTCCEEEEE
T ss_pred HHHHHHhhhcccccccccccCCccHHHHHHHHhcceeEeecCcc------H--HHHHHHcCCCEEEEE
Confidence 5544433322 2444433477999999999999999976431 1 355899999999864
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=88.20 E-value=8.8 Score=34.54 Aligned_cols=49 Identities=12% Similarity=-0.046 Sum_probs=35.9
Q ss_pred CcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 341 ~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
+||.+.+ |+|..++-. ...+|+||. |. | -+.+.||+++|+|+|+.-.-+
T Consensus 334 ~nv~~~~-w~Pq~~lL~-hp~~~~fVt-HG---G---~gS~~EAl~~GvP~v~~P~~~ 382 (471)
T d2vcha1 334 RGFVIPF-WAPQAQVLA-HPSTGGFLT-HC---G---WNSTLESVVSGIPLIAWPLYA 382 (471)
T ss_dssp TEEEEES-CCCHHHHHH-STTEEEEEE-CC---C---HHHHHHHHHHTCCEEECCCST
T ss_pred CCeeecc-cCCHHHHhc-CccCCEEEe-cC---C---ccHHHHHHHcCCCEEEccccc
Confidence 3899986 999887432 268899994 32 2 346899999999999854443
|