Citrus Sinensis ID: 015081

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410---
Protein Sequence
MSGSKSNLGTNISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSDPNSRRDSGSGSCSSKEMIPHRDHEVSGAQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEASTAREAPAHGTCEDIRDHHQRPHHHLAHDHRQQQQQHQQQHQQQQQQQHHTHHQQIATTAFHISRPSHPISTIISPSPLHHTSIILDEDSYHVSRIMLQNESFQVLKQNPVVFI
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccEEEcccccccEEEccEEEEEEEEEEEEEcccccccccccccEEEEcccccccccccccEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccHHHccccccccccccccccccccccccccccEEccccccccHHHHcccHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccHHHHHHHHHHHccccccccccccEEccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccEEEccccccccccccccccccccEEEEEccccccccccccccccccccccccccccEEEccccccEEEccccEEEEEEEEEEEEccccccccccccEEEEEEEcccccccccccEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccHHHHcccccccccccccHHHHHHHEcccccccccEEcccccccccEEEEccccccccHHHccccHHHHHccccEEEc
Coil and Loop (DISEMBL)
msgsksnlgtnisssdLIDAKLEEhqlcgskqcpgcghkleakpdwlglpagvkfdptdQELIDHLEAKVeakdmvkphplidefiptiegedgicythpeklpgvtrdglsrhffhrpskayttgtrkrrKIQTecdlqggetrwhktgktrpvmvngkqkgCKKILVLYTNfgknrkpektnWVMHQYHLgqheeekegeLVVSKIFYqtqprqcnwseksattgegssdpnsrrdsgsgscsskemiphrdhevsGAQVAAAMSSYgaidmqqlksdhfsfvpfrksfdevgigeastareapahgtcedirdhhqrphhhlahdhrQQQQQHQQQHQQQQQQQHHTHHQQIATtafhisrpshpistiispsplhhtsiildedsyhVSRIMLQNEsfqvlkqnpvvfi
Flexible Loop (DISEMBL)
msgsksnlgtnissSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKveakdmvkphpLIDEFIPTIEGEDGICYTHPEKLPGVtrdglsrhffhrpskayttgtrkrrkiqtecdlqggetrwhktgktrpvmvngkqkgckKILVLYTNfgknrkpektNWVMHQYHLGQHEEEKEGELVVSKIFYQtqprqcnwseksattgegssdpnsrrdsgSGSCSSKEMIPHRDHEVSGAQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEASTAREAPAHGTCEDIRDHHQRPHHHLAHDHRQQQQQHQQQHQQQQQQQHHTHHQQIATTAFHISRPSHPISTIISPSPLHHTSIILDEDSYHVSRIMLQnesfqvlkqnpvvfi
Low Complexity Region (SEG)
MSGSKSNLGTNISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSDPNsrrdsgsgscssKEMIPHRDHEVSGAQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEASTAREAPAHGTCEDIRDhhqrphhhlahdhrqqqqqhqqqhqqqqqqqhhthhqqIATTAFhisrpshpistiispsplhhTSIILDEDSYHVSRIMLQNESFQVLKQNPVVFI
Disordered region (IsUnstruct)
*************************QLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHR****Y************ECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQH*****GELVVSKIFYQTQ********************************************************GAIDMQQLKSDHFSFVPFRKSFDEVG*************************************************************************ISTIISPSPLHHTSIILDEDSYHVSRIMLQNESFQVLK*******
Disordered Region (DISOPRED)
*********************************************WLGLPAGVKFDPTDQELIDHLEAKVEAK*MVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIF**************************************************************************FVP*********************************************************************************************HTSIILDEDSYHVSRIMLQN*************I
Disordered Region (DISEMBL)
*********TNISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKA***********QTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQ**********************************PHRDHEVSGAQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEA*********GTCEDIRDH**************************************ATTAFHISRPSHPISTIISPSPLHHTSIILDEDSYHVSRIMLQNESFQVLKQNPVVFI
Disordered Region (DISPRO)
**************SDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQ**********************************************************ID*Q***SDHFSFVPFRKSFDEVGIGE******************************************************QQIATTAFHISRPSHPISTIISPSPLHHTSIILDEDSYHVSRIMLQNESFQVLKQNPVVFI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSGSKSNLGTNISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSDPNSRRDSGSGSCSSKEMIPHRDHEVSGAQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEASTAREAPAHGTCEDIRDHHQRPHHHLxxxxxxxxxxxxxxxxxxxxxQHHTHHQQIATTAFHISRPSHPISTIISPSPLHHTSIILDEDSYHVSRIMLQNESFQVLKQNPVVFI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	413	2.2.26 [Sep-21-2011]
Q6NQK2	449	NAC domain-containing pro	no	no	0.428	0.394	0.589	4e-57
O81913	359	NAC domain-containing pro	no	no	0.292	0.337	0.342	6e-13
Q39013	289	NAC domain-containing pro	no	no	0.307	0.439	0.344	6e-12
Q5PP28	394	NAC domain-containing pro	no	no	0.307	0.322	0.322	2e-11
Q93VY3	297	NAC domain-containing pro	no	no	0.363	0.505	0.301	4e-11
A2YMR0	425	NAC transcription factor	N/A	no	0.302	0.294	0.331	4e-11
Q52QH4	318	NAC domain-containing pro	no	no	0.455	0.591	0.271	7e-11
Q8H115	312	NAC domain-containing pro	no	no	0.353	0.467	0.304	9e-11
Q9C598	283	Protein ATAF2 OS=Arabidop	no	no	0.305	0.445	0.331	1e-10
Q7EZT1	276	NAC domain-containing pro	no	no	0.305	0.456	0.337	1e-10

>sp|Q6NQK2|NAC8_ARATH NAC domain-containing protein 8 OS=Arabidopsis thaliana GN=NAC008 PE=2 SV=1

 Score =  222 bits (565), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 112/190 (58%), Positives = 134/190 (70%), Gaps = 13/190 (6%)

Query: 30  SKQCPGCGHKLE---AKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFI 86
           S+ CP C H ++      DW GLP GVKFDP+D E+I HL AK      +  HP IDEFI
Sbjct: 36  SRHCPKCQHVIDNSDVVDDWPGLPRGVKFDPSDPEIIWHLLAK-SGLSGLSSHPFIDEFI 94

Query: 87  PTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRW 146
           PT+  +DGICYTHP+ LPGV  DG   HFFH+  KAY+TGTRKRRKI    D   G+ RW
Sbjct: 95  PTVNQDDGICYTHPKNLPGVKSDGTVSHFFHKAIKAYSTGTRKRRKIH---DDDFGDVRW 151

Query: 147 HKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVS 206
           HKTG+T+PV+++G Q+GCKKI+VLY       K  KTNWVMHQYHLG  E+EKEG+ VVS
Sbjct: 152 HKTGRTKPVVLDGVQRGCKKIMVLYGG-----KAVKTNWVMHQYHLGIEEDEKEGDYVVS 206

Query: 207 KIFYQTQPRQ 216
           KIFYQ QP+Q
Sbjct: 207 KIFYQ-QPQQ 215

Arabidopsis thaliana (taxid: 3702)

>sp|O81913|NAC4_ARATH NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2

 Score = 75.9 bits (185), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 74/149 (49%), Gaps = 28/149 (18%)

Query: 50  PAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVT-- 107
           P G +F P D+E++DH    +  K++      +DE I T++    IC   P  LP  +  
Sbjct: 4   PVGFRFRPNDEEIVDHY---LRPKNLDSDTSHVDEVISTVD----ICSFEPWDLPSKSMI 56

Query: 108 --RDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMV---NGKQK 162
             RDG+  +FF      Y  G ++RR+  +          W KTGKT  VM    N ++ 
Sbjct: 57  KSRDGV-WYFFSVKEMKYNRGDQQRRRTNSGF--------WKKTGKTMTVMRKRGNREKI 107

Query: 163 GCKKILVLYTNFGKNRKPEKTNWVMHQYH 191
           G K++LV      KNR   KT+WVMH+YH
Sbjct: 108 GEKRVLVF-----KNRDGSKTDWVMHEYH 131

Arabidopsis thaliana (taxid: 3702)

>sp|Q39013|NAC2_ARATH NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2

 Score = 72.4 bits (176), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 67/148 (45%), Gaps = 21/148 (14%)

Query: 47  LGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGV 106
           L LP G +F PTD+EL+ H   +  A   +         +P I   D   Y  P +LPG+
Sbjct: 5   LQLPPGFRFHPTDEELVMHYLCRKCASQSIA--------VPIIAEIDLYKY-DPWELPGL 55

Query: 107 TRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCK 165
              G    +F  P  + Y  G+R  R          G   W  TG  +P+ +  K  G K
Sbjct: 56  ALYGEKEWYFFSPRDRKYPNGSRPNR--------SAGSGYWKATGADKPIGLP-KPVGIK 106

Query: 166 KILVLYTNFGKNRKPEKTNWVMHQYHLG 193
           K LV Y   GK  K EKTNW+MH+Y L 
Sbjct: 107 KALVFYA--GKAPKGEKTNWIMHEYRLA 132

Arabidopsis thaliana (taxid: 3702)

>sp|Q5PP28|NAC3_ARATH NAC domain-containing protein 3 OS=Arabidopsis thaliana GN=NAC003 PE=2 SV=1

 Score = 70.9 bits (172), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 25/152 (16%)

Query: 50  PAGVKFDPTDQELI-DHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTR 108
           P G++F PTD+E++ D+L  K   +D       +D FI T+     +C   P +LP  +R
Sbjct: 4   PVGLRFCPTDEEIVVDYLWPKNSDRDTSH----VDRFINTVP----VCRLDPWELPCQSR 55

Query: 109 DGL---SRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCK 165
             L   +  FF      Y  G ++ RK ++          W  TG+ +P+M N +Q G K
Sbjct: 56  IKLKDVAWCFFRPKENKYGRGDQQMRKTKSGF--------WKSTGRPKPIMRNRQQIGEK 107

Query: 166 KILVLYTNFGKNRKPEKTNWVMHQYHLGQHEE 197
           KIL+ YT+     K  K++WV+H+YH   H +
Sbjct: 108 KILMFYTS-----KESKSDWVIHEYHGFSHNQ 134

Arabidopsis thaliana (taxid: 3702)

>sp|Q93VY3|NAC72_ARATH NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1

 Score = 69.7 bits (169), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 76/176 (43%), Gaps = 26/176 (14%)

Query: 47  LGLPAGVKFDPTDQEL-IDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPG 105
           L LP G +F PTD+EL + +L  KV              F   + G+  +    P  LP 
Sbjct: 12  LSLPPGFRFYPTDEELLVQYLCRKVAGY----------HFSLQVIGDIDLYKFDPWDLPS 61

Query: 106 VTRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGC 164
               G    +F  P  + Y  G+R  R          G   W  TG  + +  +G++ G 
Sbjct: 62  KALFGEKEWYFFSPRDRKYPNGSRPNR--------VAGSGYWKATGTDKIITADGRRVGI 113

Query: 165 KKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEE----EKEGELVVSKIFYQTQPRQ 216
           KK LV Y   GK  K  KTNW+MH+Y L +H       K  + V+ +I+ +T   Q
Sbjct: 114 KKALVFYA--GKAPKGTKTNWIMHEYRLIEHSRSHGSSKLDDWVLCRIYKKTSGSQ 167

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score = 69.7 bits (169), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 66/148 (44%), Gaps = 23/148 (15%)

Query: 49  LPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTR 108
           LP G +F PTD+EL+ H    ++ K    P P+      TI  E  +    P +LP    
Sbjct: 29  LPPGFRFHPTDEELVVHY---LKKKAASVPLPV------TIIAEVDLYKFDPWELPEKAN 79

Query: 109 DGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQK---GC 164
            G    +F  P  + Y  G R  R   +          W  TG  +P+M +G  +   G 
Sbjct: 80  FGEQEWYFFSPRDRKYPNGARPNRAATS--------GYWKATGTDKPIMASGSTREKVGV 131

Query: 165 KKILVLYTNFGKNRKPEKTNWVMHQYHL 192
           KK LV Y   GK  K  KTNW+MH+Y L
Sbjct: 132 KKALVFYR--GKPPKGVKTNWIMHEYRL 157

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1

 Score = 68.9 bits (167), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 44/232 (18%)

Query: 47  LGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGV 106
           L LP G +F PTD+EL+ H   +  A+  + P P+I E          +    P  LP  
Sbjct: 19  LNLPPGFRFHPTDEELVVHYLCRKVARQPL-PVPIIAEV--------DLYKLDPWDLPEK 69

Query: 107 TRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQK--G 163
              G    +F  P  + Y  G+R  R          G   W  TG  +PV   G  +  G
Sbjct: 70  ALFGRKEWYFFTPRDRKYPNGSRPNR--------AAGRGYWKATGADKPVAPKGSARTVG 121

Query: 164 CKKILVLYTNFGKNRKPEKTNWVMHQYHL--------GQHEEEKEGELVVSKIFYQTQPR 215
            KK LV Y+  GK  +  KT+W+MH+Y L        G+   +K  E V+ +++     +
Sbjct: 122 IKKALVFYS--GKAPRGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYN----K 175

Query: 216 QCNWSEKSATTGEGSSDPNSRRDSGSGSCSSKEMIPHRDHEVSGAQVAAAMS 267
           + NW +              ++D  S + ++     H++ EV  A  A  MS
Sbjct: 176 KNNWEKVKL----------EQQDVASVAAAAPRNHHHQNGEVMDAAAADTMS 217

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8H115|NA102_ARATH NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=1 SV=1

 Score = 68.6 bits (166), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 28/174 (16%)

Query: 24  EHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLID 83
           ++++  +++  G   K++A+   L LPAG +F PTD+EL+     +  A + +       
Sbjct: 28  QNRILSTRKQQGTFPKMKAE---LNLPAGFRFHPTDEELVKFYLCRRCASEPIN------ 78

Query: 84  EFIPTIEGEDGICYTHPEKLPGVTRDGLSR-HFFHRPSKAYTTGTRKRRKIQTECDLQGG 142
             +P I  E  +   +P +LP +   G    +FF    + Y  G+R  R          G
Sbjct: 79  --VPVI-AEIDLYKFNPWELPEMALYGEKEWYFFSHRDRKYPNGSRPNR--------AAG 127

Query: 143 ETRWHKTGKTRPVMVNGKQK--GCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQ 194
              W  TG  +P+   GK K  G KK LV Y   GK  K  KTNW+MH+Y L  
Sbjct: 128 TGYWKATGADKPI---GKPKTLGIKKALVFYA--GKAPKGIKTNWIMHEYRLAN 176

May be involved in regulation of seed germination under flooding.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C598|NAC81_ARATH Protein ATAF2 OS=Arabidopsis thaliana GN=NAC081 PE=1 SV=1

 Score = 68.6 bits (166), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 69/151 (45%), Gaps = 25/151 (16%)

Query: 47  LGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGV 106
           L LPAG +F PTD+EL+     +  A + +   P+I E          +   +P +LP +
Sbjct: 5   LNLPAGFRFHPTDEELVKFYLCRKCASEQIS-APVIAEI--------DLYKFNPWELPEM 55

Query: 107 TRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQK--G 163
           +  G    +F  P  + Y  G+R  R          G   W  TG  +P+   GK K  G
Sbjct: 56  SLYGEKEWYFFSPRDRKYPNGSRPNR--------AAGTGYWKATGADKPI---GKPKTLG 104

Query: 164 CKKILVLYTNFGKNRKPEKTNWVMHQYHLGQ 194
            KK LV Y   GK  K  KTNW+MH+Y L  
Sbjct: 105 IKKALVFYA--GKAPKGIKTNWIMHEYRLAN 133

Arabidopsis thaliana (taxid: 3702)

>sp|Q7EZT1|NAC67_ORYSJ NAC domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=NAC67 PE=2 SV=1

 Score = 68.2 bits (165), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 63/148 (42%), Gaps = 22/148 (14%)

Query: 47  LGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTH-PEKLPG 105
           L LP G +F PTD+EL+ H      A     P P+I E            Y H P  LP 
Sbjct: 15  LNLPPGFRFHPTDEELVAHYLCP-RAAGRAAPVPIIAELD---------LYRHDPWDLPH 64

Query: 106 VTRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGC 164
               G    +F  P  + Y  G+R  R              W  TG  +PV+ NG+  G 
Sbjct: 65  RALFGRREWYFFTPRDRKYPNGSRPNR--------AAASGYWKATGADKPVLHNGRTAGI 116

Query: 165 KKILVLYTNFGKNRKPEKTNWVMHQYHL 192
           KK LV Y   GK  +  KT W+MH+Y L
Sbjct: 117 KKALVFYH--GKPPRGVKTEWIMHEYRL 142

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	413
147780310	454	hypothetical protein VITISV_033770 [Viti	0.937	0.852	0.84	0.0
255546265	460	conserved hypothetical protein [Ricinus	0.953	0.856	0.844	0.0
225445043	450	PREDICTED: uncharacterized protein LOC10	0.924	0.848	0.827	0.0
224088037	455	NAC domain protein, IPR003441 [Populus t	0.934	0.848	0.829	1e-178
224122608	452	NAC domain protein, IPR003441 [Populus t	0.924	0.845	0.818	1e-178
356497569	451	PREDICTED: uncharacterized protein LOC10	0.891	0.815	0.792	1e-171
356527744	450	PREDICTED: uncharacterized protein LOC10	0.900	0.826	0.769	1e-169
356523111	467	PREDICTED: uncharacterized protein LOC10	0.893	0.790	0.742	1e-166
356511393	445	PREDICTED: uncharacterized protein LOC10	0.912	0.847	0.747	1e-163
357520797	485	NAC domain protein [Medicago truncatula]	0.944	0.804	0.726	1e-146

>gi|147780310|emb|CAN61437.1| hypothetical protein VITISV_033770 [Vitis vinifera] gi|297738730|emb|CBI27975.3| unnamed protein product [Vitis vinifera]

 Score =  665 bits (1717), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/400 (84%), Positives = 357/400 (89%), Gaps = 13/400 (3%)

Query: 4   SKSNLGTNISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELI 63
           +K++LG+ ISSSDLIDAKLEEHQ+CGSKQCPGCGHKLE KPDWLGLPAGVKFDPTDQELI
Sbjct: 2   NKTHLGS-ISSSDLIDAKLEEHQMCGSKQCPGCGHKLETKPDWLGLPAGVKFDPTDQELI 60

Query: 64  DHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY 123
           +HLEAKVEAKDM K HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY
Sbjct: 61  EHLEAKVEAKDM-KSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY 119

Query: 124 TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKT 183
           TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKT
Sbjct: 120 TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKT 179

Query: 184 NWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSDPNSRRDSGSGS 243
           NWVMHQYHLGQ EEEKEGELVVSKIFYQTQPRQCNWS++SATTGEG+S+PNSRRDSGSGS
Sbjct: 180 NWVMHQYHLGQLEEEKEGELVVSKIFYQTQPRQCNWSDRSATTGEGNSEPNSRRDSGSGS 239

Query: 244 CSSKEMIPHRDHEVSGAQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEASTAR 303
           CSSKE+IP RD E+SGA V AA+SSY  +D+QQLKSDHFSF PFRKSFDEVGIGEASTAR
Sbjct: 240 CSSKEVIPQRD-ELSGAGVGAAISSYSPLDIQQLKSDHFSFAPFRKSFDEVGIGEASTAR 298

Query: 304 EAPAHGTCEDIRDH-HQRPHHHLAHDHRQQQQQHQQQHQQQQQQQHHTHHQQIATTAFHI 362
           EAPA GTCE+   H HQRP HH+ HD + Q Q H   H             Q+AT AFHI
Sbjct: 299 EAPASGTCEEHEIHDHQRP-HHVTHDPQPQPQHHHHHHHHPH--------HQLATAAFHI 349

Query: 363 SRPSHPISTIISPSPLHHTSIILDEDSYHVSRIMLQNESF 402
           +RPSH IS IISP PLHHTSIILDEDSYHVSRIMLQNE+F
Sbjct: 350 TRPSHSISAIISPPPLHHTSIILDEDSYHVSRIMLQNENF 389

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546265|ref|XP_002514192.1| conserved hypothetical protein [Ricinus communis] gi|223546648|gb|EEF48146.1| conserved hypothetical protein [Ricinus communis]

 Score =  652 bits (1681), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/398 (84%), Positives = 355/398 (89%), Gaps = 4/398 (1%)

Query: 4   SKSNLGTNISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELI 63
           +KSNLG+ ISSSDLIDAKLEEHQLCGSKQCPGCGHKLE KPDWLGLPAGVKFDPTDQELI
Sbjct: 2   NKSNLGS-ISSSDLIDAKLEEHQLCGSKQCPGCGHKLEGKPDWLGLPAGVKFDPTDQELI 60

Query: 64  DHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY 123
           +HLEAKV AKDM K HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY
Sbjct: 61  EHLEAKVVAKDM-KSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY 119

Query: 124 TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKT 183
           TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKT
Sbjct: 120 TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKT 179

Query: 184 NWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSDPNSRRDSGSGS 243
           NWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNW+++SATTGEGSSDPNSRRDSGSGS
Sbjct: 180 NWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWTDRSATTGEGSSDPNSRRDSGSGS 239

Query: 244 CSSKEMIPHRDHEVSGAQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEASTAR 303
           CSSKE+ P RD E++GA VA A+S+Y A+D+Q LKSDHF F PFRK+FDEVGI EASTAR
Sbjct: 240 CSSKEINPQRD-EITGAGVAVALSTYTAMDIQHLKSDHFGFPPFRKTFDEVGIAEASTAR 298

Query: 304 EAPAHGTCEDIRD-HHQRPHHHLAHDHRQQQQQHQQQHQQQQQQQHHTHHQQIATTAFHI 362
           E    GTC++IR+ HH+  H    H        HQQQ Q Q Q QHH  H QIATTAFHI
Sbjct: 299 ETQVSGTCDEIREHHHRPHHLAHDHHPPPPHHHHQQQQQPQPQPQHHHVHHQIATTAFHI 358

Query: 363 SRPSHPISTIISPSPLHHTSIILDEDSYHVSRIMLQNE 400
           SRPSHPISTIISP PLHHTSIILDED YHVSR+MLQNE
Sbjct: 359 SRPSHPISTIISPPPLHHTSIILDEDPYHVSRLMLQNE 396

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445043|ref|XP_002283321.1| PREDICTED: uncharacterized protein LOC100261063 [Vitis vinifera]

 Score =  650 bits (1676), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/400 (82%), Positives = 352/400 (88%), Gaps = 18/400 (4%)

Query: 4   SKSNLGTNISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELI 63
           +K++LG+ ISSSDLIDAKLEEHQ+CGSKQCPGCGHKLE KPDWLGLPAGVKFDPTDQELI
Sbjct: 2   NKTHLGS-ISSSDLIDAKLEEHQMCGSKQCPGCGHKLETKPDWLGLPAGVKFDPTDQELI 60

Query: 64  DHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY 123
           +HLEAKVEAKDM K HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY
Sbjct: 61  EHLEAKVEAKDM-KSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY 119

Query: 124 TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKT 183
           TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKT
Sbjct: 120 TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKT 179

Query: 184 NWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSDPNSRRDSGSGS 243
           NWVMHQYHLGQ EEEKEGELVVSKIFYQTQPRQCNWS++SATTGEG+S+PNSRRDSGSGS
Sbjct: 180 NWVMHQYHLGQLEEEKEGELVVSKIFYQTQPRQCNWSDRSATTGEGNSEPNSRRDSGSGS 239

Query: 244 CSSKEMIPHRDHEVSGAQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEASTAR 303
           CSSKE+IP RD E+SGA V AA+SSY  +D+QQLKSDHFSF PFRKSFD     EASTAR
Sbjct: 240 CSSKEVIPQRD-ELSGAGVGAAISSYSPLDIQQLKSDHFSFAPFRKSFD-----EASTAR 293

Query: 304 EAPAHGTCEDIRDH-HQRPHHHLAHDHRQQQQQHQQQHQQQQQQQHHTHHQQIATTAFHI 362
           EAPA GTCE+   H HQRP HH+ HD + Q Q H   H             Q+AT AFHI
Sbjct: 294 EAPASGTCEEHEIHDHQRP-HHVTHDPQPQPQHHHHHHHHPH--------HQLATAAFHI 344

Query: 363 SRPSHPISTIISPSPLHHTSIILDEDSYHVSRIMLQNESF 402
           +RPSH IS IISP PLHHTSIILDEDSYHVSRIMLQNE+F
Sbjct: 345 TRPSHSISAIISPPPLHHTSIILDEDSYHVSRIMLQNENF 384

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224088037|ref|XP_002308301.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222854277|gb|EEE91824.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  631 bits (1627), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 330/398 (82%), Positives = 354/398 (88%), Gaps = 12/398 (3%)

Query: 4   SKSNLGTNISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELI 63
           +KSN+ + ISSS+LIDAKLEEHQLCGSKQCPGCGHKLE KPDWLGLPAGVKFDPTDQELI
Sbjct: 3   TKSNMAS-ISSSNLIDAKLEEHQLCGSKQCPGCGHKLEGKPDWLGLPAGVKFDPTDQELI 61

Query: 64  DHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY 123
           +HLEAKVEAKDM + HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY
Sbjct: 62  EHLEAKVEAKDM-RSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY 120

Query: 124 TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKT 183
           TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNR+PEKT
Sbjct: 121 TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRRPEKT 180

Query: 184 NWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSDPNSRRDSGSGS 243
           NWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCN++++SAT GEGS DP+SRRDSGSGS
Sbjct: 181 NWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNYTDRSATLGEGSGDPSSRRDSGSGS 240

Query: 244 CSSKEMIPHRDHEVSG-AQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEASTA 302
           CSSKE+IP RD E+SG   VAA++SS  A+D+ QLKSDHF F PFRKSFDEVGI EAS A
Sbjct: 241 CSSKEIIPQRD-EISGTGPVAASISSCTALDIHQLKSDHFGFTPFRKSFDEVGIREASVA 299

Query: 303 REAPAHGTCEDIRDHHQRPHHHLAHDHRQQQQQHQQQHQQQQQQQHHTHHQQIATTAFHI 362
           REA A GTC++I++ HQRP HH+AHD  QQQQ     H Q           QIAT AFHI
Sbjct: 300 REASASGTCDEIQEQHQRP-HHVAHDPHQQQQLQHHHHHQTVH-------HQIATAAFHI 351

Query: 363 SRPSHPISTIISPSPLHHTSIILDEDSYHVSRIMLQNE 400
           SRPSHPISTIISPSPLHHTSIILDED YHVSR+MLQNE
Sbjct: 352 SRPSHPISTIISPSPLHHTSIILDEDPYHVSRLMLQNE 389

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122608|ref|XP_002330524.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222872458|gb|EEF09589.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  630 bits (1624), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 320/391 (81%), Positives = 345/391 (88%), Gaps = 9/391 (2%)

Query: 11  NISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKV 70
           +ISSSDLIDAKLEEHQLCGSKQCPGCGHKLE KPDWLGLPAGVKFDPTDQELI+HLEAKV
Sbjct: 9   SISSSDLIDAKLEEHQLCGSKQCPGCGHKLEGKPDWLGLPAGVKFDPTDQELIEHLEAKV 68

Query: 71  EAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKR 130
           EAKDM + HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKR
Sbjct: 69  EAKDM-RSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKR 127

Query: 131 RKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQY 190
           RKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNR+PEKTNWVMHQY
Sbjct: 128 RKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRRPEKTNWVMHQY 187

Query: 191 HLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSDPNSRRDSGSGSCSSKEMI 250
           HLGQHEEEKEGELVVSKIFYQTQPRQCN+++++A+ GEGSS+PNSRRD GSGSCSSKE+ 
Sbjct: 188 HLGQHEEEKEGELVVSKIFYQTQPRQCNYTDRAASIGEGSSEPNSRRDGGSGSCSSKEIS 247

Query: 251 PHRDHEVSG-AQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEASTAREAPAHG 309
            H D E+SG   VA++++SY A+D+QQLKSDHF F PFRK FDEVGIGEAS  REA A  
Sbjct: 248 LHGD-EISGTGTVASSLTSYTAMDIQQLKSDHFCFTPFRKGFDEVGIGEASVTREASASA 306

Query: 310 TCEDIRDHHQRPHHHLAHDHRQQQQQHQQQHQQQQQQQHHTHHQQIATTAFHISRPSHPI 369
           TC++IR+HHQ P HH+AHD  QQQ Q QQ H    Q      H Q ATTAFH+S PSHP 
Sbjct: 307 TCDEIREHHQMP-HHVAHDPHQQQTQQQQHHYHHHQTA----HHQFATTAFHMSTPSHPF 361

Query: 370 STIISPSPLHHTSIILDEDSYHVSRIMLQNE 400
           STIISP  L+H SIILDED YHVSRIMLQNE
Sbjct: 362 STIISPPSLNH-SIILDEDPYHVSRIMLQNE 391

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356497569|ref|XP_003517632.1| PREDICTED: uncharacterized protein LOC100795246 [Glycine max]

 Score =  607 bits (1565), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 314/396 (79%), Positives = 337/396 (85%), Gaps = 28/396 (7%)

Query: 16  DLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDM 75
           DLIDAKLEEHQLCGSKQCPGCGHK E KPDWLGLPAGVKFDPTDQELI+HLEAKVEAK+M
Sbjct: 14  DLIDAKLEEHQLCGSKQCPGCGHKFEGKPDWLGLPAGVKFDPTDQELIEHLEAKVEAKNM 73

Query: 76  VKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQT 135
            K HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQ 
Sbjct: 74  -KSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQN 132

Query: 136 ECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQH 195
           ECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQH
Sbjct: 133 ECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQH 192

Query: 196 EEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSDPNS--RRDSGSGSCSSKEMIPHR 253
           EEEKEGELVVSKIFYQTQPRQCNWS++SATTGEGS +PN+  RRDSGSGSCSSKE++ HR
Sbjct: 193 EEEKEGELVVSKIFYQTQPRQCNWSDRSATTGEGSGEPNNSGRRDSGSGSCSSKEIVTHR 252

Query: 254 DHEVSGAQVAAAMSSYG---AIDMQQLKSDHFSFVPFRKSFDE---VGIGEASTAREA-P 306
           D E+S       M+S+     +D+QQLK DHFSF+PFRKSFDE   VGIGEASTARE   
Sbjct: 253 D-EMSAVVGVPPMTSFTHHHPLDIQQLKPDHFSFIPFRKSFDERMQVGIGEASTAREVMQ 311

Query: 307 AHGTCEDIRDHHQRPHHHLAHDHRQQQQQHQQQHQQQQQQQHHTHHQQIATTAFHISRPS 366
           A G+CE++   H+R   HLA           Q      Q Q H HH QI+ +AFHISRPS
Sbjct: 312 ASGSCEEV---HER---HLA-----------QVTPHHHQLQQHAHHHQISNSAFHISRPS 354

Query: 367 HPISTIISPSPLHHTSIILDEDSYHVSRIMLQNESF 402
           HPISTIISP PLHHTSIILD++SYHVSRIMLQNE+F
Sbjct: 355 HPISTIISPPPLHHTSIILDDNSYHVSRIMLQNENF 390

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527744|ref|XP_003532468.1| PREDICTED: uncharacterized protein LOC100799291 [Glycine max]

 Score =  599 bits (1545), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 310/403 (76%), Positives = 338/403 (83%), Gaps = 31/403 (7%)

Query: 12  ISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKVE 71
           + SSDLIDAKLEEHQLCGSKQCPGCGHK E KPDWLGLPAGVKFDPTDQELI+HLEAKVE
Sbjct: 10  VRSSDLIDAKLEEHQLCGSKQCPGCGHKFEGKPDWLGLPAGVKFDPTDQELIEHLEAKVE 69

Query: 72  AKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRR 131
           AK+M K HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRR
Sbjct: 70  AKNM-KSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRR 128

Query: 132 KIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYH 191
           KIQ ECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYH
Sbjct: 129 KIQNECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYH 188

Query: 192 LGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSDPNS--------RRDSGSGS 243
           LGQ+EEE+EGELVVSKIFYQTQPRQCNWS++SATTGEGS +  S        RRDSGSG+
Sbjct: 189 LGQYEEEREGELVVSKIFYQTQPRQCNWSDRSATTGEGSGEQQSNNNNNNNGRRDSGSGT 248

Query: 244 C-SSKEM-IPHRDHEVSGAQVAAAMSSYG-AIDMQQLKSDHFSFVPFRKSFDEVGIGEAS 300
           C SSKE+ + HRD E+S   V   ++++  A+D+QQLKSDHF F+PFRK FDEVGIGEA 
Sbjct: 249 CSSSKEINVTHRD-EMSAVVVVPPITTFNTALDIQQLKSDHFGFIPFRKGFDEVGIGEAC 307

Query: 301 TAREAPAHGTCEDIRDHHQRPHHHLAHDHRQQQQQHQQQHQQQQQQQHHTHHQQIATTAF 360
           TARE  A G+C+++   H+R               H   H QQQQQQ+    QQIATTA 
Sbjct: 308 TAREVQASGSCDEV---HER---------------HAVHHHQQQQQQNQHAQQQIATTAS 349

Query: 361 HISRPSHPISTIISPSPLHHTSIILDEDSYHVSRIMLQNESFQ 403
           HISRPS PISTIISP PLHH SIILD++SYHVSRIMLQNE+FQ
Sbjct: 350 HISRPSLPISTIISPPPLHHASIILDDNSYHVSRIMLQNENFQ 392

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356523111|ref|XP_003530185.1| PREDICTED: uncharacterized protein LOC100791884 [Glycine max]

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 309/416 (74%), Positives = 335/416 (80%), Gaps = 47/416 (11%)

Query: 16  DLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDM 75
           DLIDAKLEEHQLCGSKQCPGCGHK E KPDWLGLPAGVKFDPTDQEL +HLEAKVEAK+M
Sbjct: 15  DLIDAKLEEHQLCGSKQCPGCGHKFEGKPDWLGLPAGVKFDPTDQELTEHLEAKVEAKNM 74

Query: 76  VKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQT 135
            K HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLS+HFFHRPSKAYTTGTRKRRKIQ 
Sbjct: 75  -KSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSKHFFHRPSKAYTTGTRKRRKIQN 133

Query: 136 ECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQH 195
           ECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQH
Sbjct: 134 ECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQH 193

Query: 196 EEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSDPNS----RRDSGSGSCSSKEMIP 251
           EEEKEGELVVSKIFYQTQPRQCNWS++SATTGEGS +PN+    RRDSGSGSCSSKE++ 
Sbjct: 194 EEEKEGELVVSKIFYQTQPRQCNWSDRSATTGEGSGEPNNNSTGRRDSGSGSCSSKEIVT 253

Query: 252 HRDH--EVSGAQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDE---------------- 293
           HRD    V G       +++  +D+QQLK DHFSF+PFRK+FDE                
Sbjct: 254 HRDEMSAVVGVPPMTGFTTHLPLDIQQLKPDHFSFIPFRKTFDEIEFAFAPKSEIRTWKW 313

Query: 294 ----VGIGEASTAREAP-AHGTCEDIRDHHQRPHHHLAHDHRQQQQQHQQQHQQQQQQQH 348
               VGIGEASTARE   A G+CE++   H+R                + QH    QQQ 
Sbjct: 314 LRMQVGIGEASTAREVVQASGSCEEV---HER---------------QRAQHVAHHQQQQ 355

Query: 349 HTHHQQIATTAFHISRPSHPISTIISPSPLHHTSIILDE-DSYHVSRIMLQNESFQ 403
           H HH QI+ +AFHISRPSHPISTIISP PLHHTSIILD+ +SYHVSRIMLQNE+FQ
Sbjct: 356 HAHHHQISNSAFHISRPSHPISTIISPPPLHHTSIILDDNNSYHVSRIMLQNENFQ 411

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356511393|ref|XP_003524411.1| PREDICTED: uncharacterized protein LOC100794811 [Glycine max]

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 302/404 (74%), Positives = 328/404 (81%), Gaps = 27/404 (6%)

Query: 6   SNLGTNISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKPDWLGLPAGVKFDPTDQELIDH 65
           SNL   + SSDLIDAKLEEHQLCGSKQCPGCGHK E KPDWLGLPAGVKFDPTDQELI+H
Sbjct: 5   SNLSC-VRSSDLIDAKLEEHQLCGSKQCPGCGHKFEGKPDWLGLPAGVKFDPTDQELIEH 63

Query: 66  LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTT 125
           LEAK+EAK+M K HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTT
Sbjct: 64  LEAKIEAKNM-KSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTT 122

Query: 126 GTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNW 185
           GTRKRRKIQ ECDLQGGETRWHKTGKTRPVMVNGKQKG KKILVLYTNFGKNRKPEKTNW
Sbjct: 123 GTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGKQKGYKKILVLYTNFGKNRKPEKTNW 182

Query: 186 VMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSATTGEGSSD--PNS---RRD-S 239
           VMHQYH+GQHEEEKEGELVVSKIFYQTQPRQCNWS++SATTGEGS +  PN+   RRD  
Sbjct: 183 VMHQYHMGQHEEEKEGELVVSKIFYQTQPRQCNWSDRSATTGEGSGEQQPNNNNGRRDSG 242

Query: 240 GSGSCSSKEMIPHRDHEVSGAQVAAAMSSYGAIDMQQLKSDHFSFVPFRKSFDEVGIGEA 299
                SSKE++ HRD   +   V    +   ++D+QQLKS+HF F+PFRK FDEVGIGEA
Sbjct: 243 SGSCSSSKEIVTHRDEMSAVVGVPPITTFNTSLDIQQLKSNHFGFIPFRKGFDEVGIGEA 302

Query: 300 STAREAPAHGTCEDIRDHHQRPHHHLAHDHRQQQQQHQQQHQQQQQQQHHTHHQQIATTA 359
           STARE  A G+C ++ + H                     H  QQQQQ+   HQQIATTA
Sbjct: 303 STAREVQASGSCNEVHERH-------------------VAHHHQQQQQNQHAHQQIATTA 343

Query: 360 FHISRPSHPISTIISPSPLHHTSIILDEDSYHVSRIMLQNESFQ 403
           FHIS PS PISTIISP P HH SIILD++SYHVSRIMLQNE+FQ
Sbjct: 344 FHISSPSLPISTIISPPPFHHASIILDDNSYHVSRIMLQNENFQ 387

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357520797|ref|XP_003630687.1| NAC domain protein [Medicago truncatula] gi|355524709|gb|AET05163.1| NAC domain protein [Medicago truncatula]

 Score =  523 bits (1348), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 300/413 (72%), Positives = 332/413 (80%), Gaps = 23/413 (5%)

Query: 6   SNLGTNISSSDLIDAKLEEHQLCGSKQCPGCGHKLE-AKPDWLGLPAGVKFDPTDQELID 64
           +N  +N+SSS+LID+KLEEHQLCGSK CP CGHK +  KPDWLGLPAGVKFDPTDQELI+
Sbjct: 3   NNKMSNVSSSNLIDSKLEEHQLCGSKHCPRCGHKFDQGKPDWLGLPAGVKFDPTDQELIE 62

Query: 65  HLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYT 124
           HLEAKVE+K+M K HPLIDEFI TIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYT
Sbjct: 63  HLEAKVESKNMQKSHPLIDEFILTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYT 122

Query: 125 TGTRKRRKIQT-ECDLQ---GGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKP 180
           TGTRKRRKIQT ECDLQ   GGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKP
Sbjct: 123 TGTRKRRKIQTEECDLQGSTGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKP 182

Query: 181 EKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKS------------ATTGE 228
           EKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWS+ +             + GE
Sbjct: 183 EKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDNNQRIISATTTTGEGSGGE 242

Query: 229 GSSDPNSRRDSGSGSCSSKEMIP--HRDHEVSGAQVAAAMSSY-GAIDMQQLKSDHFSFV 285
            + + N RRDSGSGS SSKE++   HRD   +   V + ++S+  A+D+Q LKSDHF F+
Sbjct: 243 PNYNINGRRDSGSGSSSSKEIVTQIHRDEMSAVVGVPSPLTSFTNALDIQHLKSDHFGFI 302

Query: 286 PFRKSFDEVGIGEASTAREAPAHGTCEDIRDHHQRPHHHLAHDHRQQQQQHQQQHQQQQQ 345
           PFRKS+DEVGIGE ST RE  A G   D ++ H+R HH LAH H+QQQQQ   Q QQQQ 
Sbjct: 303 PFRKSYDEVGIGEGSTTREMQASGGSCD-QEVHERQHHVLAHHHQQQQQQQHHQQQQQQH 361

Query: 346 QQHHTHHQQIATTAFHISRPSHPISTIISPSPLHHTS-IILDEDSYHVSRIML 397
             H       A  AFHISRPS+PISTIISP PLHHTS IILD++SYHVS IML
Sbjct: 362 DHHVHQQIS-ANAAFHISRPSNPISTIISPPPLHHTSTIILDDNSYHVSTIML 413

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	413
TAIR|locus:2118264	498	NAC075 "NAC domain containing	0.535	0.443	0.860	5.1e-122
TAIR|locus:2165031	386	NAC099 "NAC domain containing	0.506	0.541	0.772	4.2e-98
TAIR|locus:2121387	305	NAC073 "NAC domain containing	0.474	0.642	0.709	1.1e-76
TAIR|locus:2032580	314	NAC010 "NAC domain containing	0.450	0.592	0.690	2.9e-71
TAIR|locus:2031170	449	SOG1 "SUPPRESSOR OF GAMMA RADI	0.428	0.394	0.589	1.8e-55
TAIR|locus:2145743	350	NAC085 "NAC domain containing	0.530	0.625	0.495	6.5e-51
TAIR|locus:2084148	370	NAC044 "NAC domain containing	0.481	0.537	0.495	3.7e-48
TAIR|locus:2204833	394	NAC003 "NAC domain containing	0.382	0.401	0.304	1e-10
TAIR|locus:2204783	359	NAC004 "NAC domain containing	0.292	0.337	0.342	1.8e-10
TAIR|locus:2184742	489	NAC082 "NAC domain containing	0.302	0.255	0.367	8e-10

TAIR|locus:2118264 NAC075 "NAC domain containing protein 75" [Arabidopsis thaliana (taxid:3702)]

 Score = 1063 (379.3 bits), Expect = 5.1e-122, Sum P(3) = 5.1e-122
 Identities = 197/229 (86%), Positives = 209/229 (91%)

Query:     4 SKSNLGTNISSSDLIDAKLEEHQLCGSKQCPGCGHKLEAKP-DWLGLPAGVKFDPTDQEL 62
             +KSN   +++ SD+IDAK+EEHQLCGSK+CP CGHKLE KP DW+GLPAGVKFDPTDQEL
Sbjct:     2 NKSNPAGSVTGSDIIDAKIEEHQLCGSKKCPSCGHKLEGKPQDWVGLPAGVKFDPTDQEL 61

Query:    63 IDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKA 122
             I+HLEAKV AKD  K HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKA
Sbjct:    62 IEHLEAKVLAKDF-KSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKA 120

Query:   123 YTTGTRKRRKIQTECD--LQG----GETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGK 176
             YTTGTRKRRKIQTECD  LQG    GETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGK
Sbjct:   121 YTTGTRKRRKIQTECDNNLQGSSSSGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGK 180

Query:   177 NRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSAT 225
             NRKPEKTNWVMHQYHLG HEEEKEGELVVSKIFYQTQPRQCNWS  +++
Sbjct:   181 NRKPEKTNWVMHQYHLGTHEEEKEGELVVSKIFYQTQPRQCNWSSSTSS 229

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2165031 NAC099 "NAC domain containing protein 99" [Arabidopsis thaliana (taxid:3702)]

 Score = 912 (326.1 bits), Expect = 4.2e-98, Sum P(2) = 4.2e-98
 Identities = 173/224 (77%), Positives = 195/224 (87%)

Query:    13 SSSDLIDAKLEEHQ-LCGSKQCPGCGHKLEA--KPDWLGLPAGVKFDPTDQELIDHLEAK 69
             S  +LID+KLEEH  LCGSK CPGCG  ++A  KP+W+GLPAGVKFDPTDQELI+HLEAK
Sbjct:     4 SKCNLIDSKLEEHHHLCGSKHCPGCGRMIQAATKPNWVGLPAGVKFDPTDQELIEHLEAK 63

Query:    70 VEAKDMVKP----HPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTT 125
             V+ K+  K     HPLIDEFIPTI+GEDGICYTHP+KLPGVTRDGLS+HFFH+PS+AYTT
Sbjct:    64 VKGKEENKKWSSSHPLIDEFIPTIDGEDGICYTHPQKLPGVTRDGLSKHFFHKPSRAYTT 123

Query:   126 GTRKRRKI-QTECD--LQGG-ETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPE 181
             GTRKRRKI QT+ D  L G  ETRWHKTGKTRPVM+NG+Q+GCKKILVLYTNFGKNR+PE
Sbjct:   124 GTRKRRKIIQTDHDSELTGSSETRWHKTGKTRPVMINGQQRGCKKILVLYTNFGKNRRPE 183

Query:   182 KTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQC----NWSE 221
             KTNWVMHQYHLG +EEE+EGELVVSKIFYQTQPRQC    NWS+
Sbjct:   184 KTNWVMHQYHLGINEEEREGELVVSKIFYQTQPRQCVSNTNWSD 227

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2121387 NAC073 "NAC domain containing protein 73" [Arabidopsis thaliana (taxid:3702)]

 Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
 Identities = 144/203 (70%), Positives = 162/203 (79%)

Query:    31 KQCPGCGHKLEAKP-----DWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEF 85
             K CP CGH  +        D  GLPAGVKFDPTDQE+++HLE KV   D  K HPLIDEF
Sbjct:    36 KTCPSCGHNFKFHEQAGIHDLPGLPAGVKFDPTDQEVLEHLEGKVR-DDAKKLHPLIDEF 94

Query:    86 IPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETR 145
             I TI+GE+GICYTHPEKLPGV +DG  RHFFHRPSKAYTTGTRKRRK+ T+ D+ GGETR
Sbjct:    95 IRTIDGENGICYTHPEKLPGVNKDGTVRHFFHRPSKAYTTGTRKRRKVHTDSDV-GGETR 153

Query:   146 WHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVV 205
             WHKTGKTRPV+  G+ +G KKILVLYTN+GK +KPEKTNWVMHQYHLG  EEEKEGELVV
Sbjct:   154 WHKTGKTRPVLAGGRVRGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGTSEEEKEGELVV 213

Query:   206 SKIFYQTQPRQCNWSEKSATTGE 228
             SK+FYQTQPRQC  S  +A T +
Sbjct:   214 SKVFYQTQPRQCGGSVAAAATAK 236

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:2000652 "regulation of secondary cell wall biogenesis" evidence=IMP

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2032580 NAC010 "NAC domain containing protein 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
 Identities = 136/197 (69%), Positives = 158/197 (80%)

Query:    33 CPGCGHKLEA-KPDWLG-------LPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDE 84
             CP CGHKL   + D +G       LPAGVKFDP+D+E++ HLEAKV + D  K HPLIDE
Sbjct:    53 CPSCGHKLHHHQDDQVGSIKDLPSLPAGVKFDPSDKEILMHLEAKVSS-DKRKLHPLIDE 111

Query:    85 FIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGET 144
             FIPT+EGE+GICYTHPEKLPGV++DG  RHFFHRPSKAYTTGTRKRRK+ T  D +G ET
Sbjct:   112 FIPTLEGENGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVST--DEEGHET 169

Query:   145 RWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELV 204
             RWHKTGKTRPV+    + G KKILVLYTN+G+ +KPEKTNWVMHQYHLG  E+EK+GE V
Sbjct:   170 RWHKTGKTRPVLSQSGETGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSSEDEKDGEPV 229

Query:   205 VSKIFYQTQPRQCNWSE 221
             +SK+FYQTQPRQC   E
Sbjct:   230 LSKVFYQTQPRQCGSME 246

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:2000652 "regulation of secondary cell wall biogenesis" evidence=IMP

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016926 "protein desumoylation" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

TAIR|locus:2031170 SOG1 "SUPPRESSOR OF GAMMA RADIATION 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
 Identities = 112/190 (58%), Positives = 135/190 (71%)

Query:    30 SKQCPGCGHKLEAKP---DWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFI 86
             S+ CP C H ++      DW GLP GVKFDP+D E+I HL AK     +   HP IDEFI
Sbjct:    36 SRHCPKCQHVIDNSDVVDDWPGLPRGVKFDPSDPEIIWHLLAKSGLSGL-SSHPFIDEFI 94

Query:    87 PTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRW 146
             PT+  +DGICYTHP+ LPGV  DG   HFFH+  KAY+TGTRKRRKI  + D   G+ RW
Sbjct:    95 PTVNQDDGICYTHPKNLPGVKSDGTVSHFFHKAIKAYSTGTRKRRKIHDD-DF--GDVRW 151

Query:   147 HKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVS 206
             HKTG+T+PV+++G Q+GCKKI+VLY       K  KTNWVMHQYHLG  E+EKEG+ VVS
Sbjct:   152 HKTGRTKPVVLDGVQRGCKKIMVLYGG-----KAVKTNWVMHQYHLGIEEDEKEGDYVVS 206

Query:   207 KIFYQTQPRQ 216
             KIFYQ QP+Q
Sbjct:   207 KIFYQ-QPQQ 215

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0000077 "DNA damage checkpoint" evidence=IMP

GO:0040020 "regulation of meiosis" evidence=IMP

GO:0010332 "response to gamma radiation" evidence=IMP

TAIR|locus:2145743 NAC085 "NAC domain containing protein 85" [Arabidopsis thaliana (taxid:3702)]

 Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
 Identities = 116/234 (49%), Positives = 153/234 (65%)

Query:     8 LGTNISSSDLIDAKLEEHQLCGSK-QCPGCGHKLEAK---PDWLGLPAGVKFDPTDQELI 63
             +  N+ ++ L  A L+    CG+   C  C ++++       W GLP GVKF+PTD+E+I
Sbjct:    15 ISRNVKNASLSSA-LQIKD-CGAYINCFNCSYRIDNSNVLTPWPGLPKGVKFEPTDEEVI 72

Query:    64 DHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAY 123
             +HLEAK    D +KPH LI +FI ++  + GI YTHP+ LPGV++DG S  FF++ + AY
Sbjct:    73 EHLEAKCGI-DGLKPHLLIQDFICSVTQDVGINYTHPQNLPGVSKDGTSVFFFNKTAHAY 131

Query:   124 TTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKT 183
               G RKRR+I T   L+    RWHKTG+T+PVM+NG QKGCKKI+VLY +  K  KPEK+
Sbjct:   132 QNGQRKRRRI-TPTSLKDDTVRWHKTGQTKPVMLNGIQKGCKKIMVLYKSARKGFKPEKS 190

Query:   184 NWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQ----CNWSEKSATTGEGSSDP 233
             NWV+HQYHLG  EE + GE VVSKI YQ QP+Q     + SE S   G G S P
Sbjct:   191 NWVLHQYHLGT-EEGEIGEYVVSKITYQ-QPKQQEKTIDESESSGVRG-GPSTP 241

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2084148 NAC044 "NAC domain containing protein 44" [Arabidopsis thaliana (taxid:3702)]

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 102/206 (49%), Positives = 138/206 (66%)

Query:    26 QLCGSK-QCPGCGHKLEAKP---DWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPL 81
             Q CG+  +CP C ++++       W GLP GVKF+PTD+++I+ LEAK       +PH L
Sbjct:    28 QDCGAHIKCPNCTYRIDNSNVLIPWPGLPKGVKFEPTDEDIIEFLEAKCGIGGS-EPHVL 86

Query:    82 IDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQG 141
             I+EFI  +  + GI YTHP+ LPG  +DG+S  FFH+  +AY TG RKRRKI T   +  
Sbjct:    87 IEEFIRPVTEDVGINYTHPQNLPGANKDGVSVFFFHKTVQAYGTGQRKRRKI-TPTLVND 145

Query:   142 GETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEG 201
                RWHKTG+T+PVM++G Q+GCKKI+VLY +  K  KPEK+NWV+HQYHLG  E ++ G
Sbjct:   146 EPVRWHKTGRTKPVMLSGVQRGCKKIMVLYKSARKGTKPEKSNWVLHQYHLGT-EGKEIG 204

Query:   202 ELVVSKIFYQTQPRQCNWSEKSATTG 227
             + VVSKI YQ Q    N  E  +++G
Sbjct:   205 DYVVSKITYQQQKLGENPDEGESSSG 230

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2204833 NAC003 "NAC domain containing protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 1.0e-10, P = 1.0e-10
 Identities = 56/184 (30%), Positives = 91/184 (49%)

Query:    50 PAGVKFDPTDQELI-DHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTR 108
             P G++F PTD+E++ D+L  K   +D    H  +D FI T+     +C   P +LP  +R
Sbjct:     4 PVGLRFCPTDEEIVVDYLWPKNSDRDT--SH--VDRFINTVP----VCRLDPWELPCQSR 55

Query:   109 DGLS--RHFFHRPSK-AYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCK 165
               L      F RP +  Y  G ++ RK ++          W  TG+ +P+M N +Q G K
Sbjct:    56 IKLKDVAWCFFRPKENKYGRGDQQMRKTKSGF--------WKSTGRPKPIMRNRQQIGEK 107

Query:   166 KILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSEKSAT 225
             KIL+ YT+     K  K++WV+H+YH   H +       + K+ +    R+ + S  S++
Sbjct:   108 KILMFYTS-----KESKSDWVIHEYHGFSHNQMMM-TYTLCKVMFNGGMREKSSSSPSSS 161

Query:   226 TGEG 229
                G
Sbjct:   162 GVSG 165

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016926 "protein desumoylation" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

TAIR|locus:2204783 NAC004 "NAC domain containing protein 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 172 (65.6 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 51/149 (34%), Positives = 74/149 (49%)

Query:    50 PAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVT-- 107
             P G +F P D+E++DH    +  K++      +DE I T++    IC   P  LP  +  
Sbjct:     4 PVGFRFRPNDEEIVDHY---LRPKNLDSDTSHVDEVISTVD----ICSFEPWDLPSKSMI 56

Query:   108 --RDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMV---NGKQK 162
               RDG+  +FF      Y  G ++RR+  +          W KTGKT  VM    N ++ 
Sbjct:    57 KSRDGVW-YFFSVKEMKYNRGDQQRRRTNSGF--------WKKTGKTMTVMRKRGNREKI 107

Query:   163 GCKKILVLYTNFGKNRKPEKTNWVMHQYH 191
             G K++LV      KNR   KT+WVMH+YH
Sbjct:   108 GEKRVLVF-----KNRDGSKTDWVMHEYH 131

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2184742 NAC082 "NAC domain containing protein 82" [Arabidopsis thaliana (taxid:3702)]

 Score = 169 (64.5 bits), Expect = 8.0e-10, P = 8.0e-10
 Identities = 54/147 (36%), Positives = 72/147 (48%)

Query:    49 LPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVT- 107
             L  G +F PTD EL+ +    ++ K + K   L+D        E  I    P  LP ++ 
Sbjct:     6 LAPGFRFHPTDVELVRYY---LKRKILGKKL-LVDAI-----AEVDIYKFEPPDLPDMSF 56

Query:   108 -RDG-LSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCK 165
              R G L  HFF    K Y +G R  R   TEC        W  TGK RPV+ N +  G  
Sbjct:    57 IRSGDLKWHFFCPREKKYASGVRANRA--TECGY------WKTTGKERPVLCNSEVVG-- 106

Query:   166 KILVLYTNFGKNRKPEKTNWVMHQYHL 192
             KI  L  +FGK+ + E+T+WVMH+Y L
Sbjct:   107 KIKTLVYHFGKSPRGERTDWVMHEYRL 133

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	413
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	9e-45
pfam04684	508	pfam04684, BAF1_ABF1, BAF1 / ABF1 chromatin reorga	3e-04
PHA03420	137	PHA03420, PHA03420, E4 protein; Provisional	0.003
pfam04684	508	pfam04684, BAF1_ABF1, BAF1 / ABF1 chromatin reorga	0.004

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  151 bits (383), Expect = 9e-45
 Identities = 53/149 (35%), Positives = 70/149 (46%), Gaps = 23/149 (15%)

Query: 49  LPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVT 107
           LP G +F PTD+EL+ + L+ KV  K +      + + IP    E  I    P  LP   
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLGKPLP-----LLDVIP----EVDIYKFEPWDLPDGK 51

Query: 108 RDGLSR--HFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMV-NGKQKGC 164
             G  R  +FF    + Y  G+R  R          G   W  TGK +PV+   G+  G 
Sbjct: 52  AKGGDREWYFFSPRDRKYPNGSRTNRAT--------GSGYWKATGKDKPVLSKGGEVVGM 103

Query: 165 KKILVLYTNFGKNRKPEKTNWVMHQYHLG 193
           KK LV Y   G+  K EKT+WVMH+Y L 
Sbjct: 104 KKTLVFYK--GRAPKGEKTDWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

>gnl|CDD|113452 pfam04684, BAF1_ABF1, BAF1 / ABF1 chromatin reorganising factor

 Score = 42.4 bits (99), Expect = 3e-04
 Identities = 23/56 (41%), Positives = 25/56 (44%), Gaps = 9/56 (16%)

Query: 316 DHHQRPHHHLA-----HDHR---QQQQQHQQQHQQQQQQ-QHHTHHQQIATTAFHI 362
           DHHQ  HHH       H H+     Q  HQ  HQ QQQ  QH   HQQ      H+
Sbjct: 290 DHHQHQHHHHPSIPAHHQHQLPEGHQHDHQHHHQHQQQDLQHQEQHQQHVDNDHHV 345

ABF1 is a sequence-specific DNA binding protein involved in transcription activation, gene silencing and initiation of DNA replication. ABF1 is known to remodel chromatin, and it is proposed that it mediates its effects on transcription and gene expression by modifying local chromatin architecture. These functions require a conserved stretch of 20 amino acids in the C-terminal region of ABF1 (amino acids 639 to 662 S. cerevisiae). The N-terminal two thirds of the protein are necessary for DNA binding, and the N-terminus (amino acids 9 to 91 in S. cerevisiae) is thought to contain a novel zinc-finger motif which may stabilise the protein structure. Length = 508

>gnl|CDD|177648 PHA03420, PHA03420, E4 protein; Provisional

 Score = 37.7 bits (87), Expect = 0.003
 Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 3/62 (4%)

Query: 295 GIGEASTAREAPAHGTCEDIRDHHQRPHHHLAHDHRQQQQ--QHQQQHQQQQQQQHHTHH 352
           G  E    +    +    D  D+  RPHHH  H H+Q     Q +Q   QQ  Q+ H   
Sbjct: 26  GRAENQHIQREGGNHRTWDPADYLDRPHHH-PHRHQQDDHHLQDRQHLPQQHLQRPHHPL 84

Query: 353 QQ 354
             
Sbjct: 85  SP 86

Length = 137

>gnl|CDD|113452 pfam04684, BAF1_ABF1, BAF1 / ABF1 chromatin reorganising factor

 Score = 38.9 bits (90), Expect = 0.004
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 318 HQRPHHHLAHDHRQQQQQHQQQHQQQQQQQHHTHHQQIATTA 359
           HQ  H H  H H+QQ  QHQ+QHQQ     HH +  +I + +
Sbjct: 314 HQHDHQH-HHQHQQQDLQHQEQHQQHVDNDHHVYQDRIGSIS 354

ABF1 is a sequence-specific DNA binding protein involved in transcription activation, gene silencing and initiation of DNA replication. ABF1 is known to remodel chromatin, and it is proposed that it mediates its effects on transcription and gene expression by modifying local chromatin architecture. These functions require a conserved stretch of 20 amino acids in the C-terminal region of ABF1 (amino acids 639 to 662 S. cerevisiae). The N-terminal two thirds of the protein are necessary for DNA binding, and the N-terminus (amino acids 9 to 91 in S. cerevisiae) is thought to contain a novel zinc-finger motif which may stabilise the protein structure. Length = 508

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	413
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0
KOG1883	1517	consensus Cofactor required for Sp1 transcriptiona	93.86
KOG4407	1973	consensus Predicted Rho GTPase-activating protein	89.42
KOG2991	330	consensus Splicing regulator [RNA processing and m	87.9
KOG3598	2220	consensus Thyroid hormone receptor-associated prot	87.87
PHA03420	137	E4 protein; Provisional	84.13
PF04684	496	BAF1_ABF1: BAF1 / ABF1 chromatin reorganising fact	81.97

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=1.4e-36  Score=265.55  Aligned_cols=126  Identities=40%  Similarity=0.699  Sum_probs=88.4

Q ss_pred             CCCCceeCCChHHHHH-HHHHHHhcCCCCCCCCcccccccccccCCCCCCCCCCCCCCc-ccCCcceEEEecCCCCCCCC
Q 015081           49 LPAGVKFDPTDQELID-HLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGV-TRDGLSRHFFHRPSKAYTTG  126 (413)
Q Consensus        49 LPpGfRF~PTDeELV~-yL~~Ki~g~~l~~~~Pl~~~~Ip~id~e~DIy~~ePwdLPg~-~~~g~~~yFF~~~~rk~~~G  126 (413)
                      |||||||+|||+|||. ||++|+.+.++    |. ..+|++    +|||+.+||+||+. ...+++||||+++.+++.+|
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~----~~-~~~i~~----~Diy~~~P~~L~~~~~~~~~~~yFF~~~~~~~~~~   71 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPL----PC-EDVIHD----VDIYSAHPWELPAKFKGGDEEWYFFSPRKKKYPNG   71 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HH----CS--CHSEE------GGGS-GGGCHHHSSS-SSEEEEEEE--------
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCC----Cc-ccceee----cccCccChHHhhhhccCCCceEEEEEecccccCCc
Confidence            8999999999999997 79999999864    22 245654    47999999999942 23456899999988888999


Q ss_pred             CcccccccccccCCCCCcEEeecCCCceEEe-CCEEeeeeEEEeeEeecCCCCCCCCCCeEEEEEEeC
Q 015081          127 TRKRRKIQTECDLQGGETRWHKTGKTRPVMV-NGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLG  193 (413)
Q Consensus       127 ~R~rR~~~t~~~v~~g~G~Wk~tG~~k~I~~-~G~~VG~KktL~FY~~~G~~~~g~kT~WvMhEYsL~  193 (413)
                      .|.+|++        ++|+||.+|++++|.. +|.+||+|++|+||.  ++.+++.+|+|+||||+|.
T Consensus        72 ~r~~R~~--------~~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~--~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   72 GRPNRVT--------GGGYWKSTGKEKPIKDPGGKVIGFKKTLVFYS--GKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             --S-EEE--------TTEEEEEECEEEEEEE-TTCEEEEEEEEEEEE--SSTTS-EEEEEEEEEEEE-
T ss_pred             ccccccc--------cceEEeecccccccccccceeeeeEEEEEEEe--ccCCCCCcCCeEEEEEEeC
Confidence            9999964        5899999999999998 899999999999997  6778889999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

>KOG1883 consensus Cofactor required for Sp1 transcriptional activation, subunit 3 [Transcription]

Probab=93.86  E-value=0.067  Score=61.58  Aligned_cols=73  Identities=26%  Similarity=0.367  Sum_probs=33.6

Q ss_pred             chhhHHHHHHHHHHHHHHHhhh-hhhhhhcccccccCCCCCCcccccCCC-CCCcceeeecCCCCcceeeeccccccccc
Q 015081          328 DHRQQQQQHQQQHQQQQQQQHH-THHQQIATTAFHISRPSHPISTIISPS-PLHHTSIILDEDSYHVSRIMLQNESFQVL  405 (413)
Q Consensus       328 ~~~~~~~~~qqqqq~qq~q~~~-~~~~~~~~~~~~~~~~~~p~~~~~sp~-~~~~~s~~l~~~~~~~~~~~~~~~~~~~~  405 (413)
                      ||.|+++|||++|||+++++|| =.|++.-+.+++.++|--|-  +.-|. ++.|   .+  -+| +.| |+|++.-++-
T Consensus      1429 hq~q~t~q~q~~Qqq~~~~~qqqlqhq~~n~~~vQt~s~p~p~--~l~~~g~~~~---~~--~~y-~qH-mqqH~h~~~~ 1499 (1517)
T KOG1883|consen 1429 HQMQDTSQHQTIQQQSNHPTQQQLQHQIPNMSMVQTMSPPYPG--FLHPSGPVGH---VP--MQY-GQH-MQQHPHLPHH 1499 (1517)
T ss_pred             hhhhhhhHHHHHHHHhcchHHHHHHHhccccceeeecCCCCCc--cccccccccc---cc--hhh-HHH-HHhccCCCcc
Confidence            3444444444444444333333 34444556667665443332  33222 2222   11  223 555 7777766666


Q ss_pred             ccCC
Q 015081          406 KQNP  409 (413)
Q Consensus       406 ~~~~  409 (413)
                      .++|
T Consensus      1500 ~~~~ 1503 (1517)
T KOG1883|consen 1500 QQMP 1503 (1517)
T ss_pred             ccCC
Confidence            5555

>KOG4407 consensus Predicted Rho GTPase-activating protein [General function prediction only]

Probab=89.42  E-value=0.29  Score=57.37  Aligned_cols=17  Identities=18%  Similarity=0.315  Sum_probs=7.4

Q ss_pred             CCCCCCCcccCCCCCCC
Q 015081          306 PAHGTCEDIRDHHQRPH  322 (413)
Q Consensus       306 ~~~~~~~~~~~~~~~~~  322 (413)
                      +.+....+.|-|..+||
T Consensus       277 ~q~~Sq~qsHs~Pn~~~  293 (1973)
T KOG4407|consen  277 PQSQSQSQSHSHPNTHH  293 (1973)
T ss_pred             chhhhhcccCCCCCcCc
Confidence            34444444444444443

>KOG2991 consensus Splicing regulator [RNA processing and modification]

Probab=87.90  E-value=1.1  Score=44.46  Aligned_cols=7  Identities=29%  Similarity=0.273  Sum_probs=2.8

Q ss_pred             CCCCCCc
Q 015081          307 AHGTCED  313 (413)
Q Consensus       307 ~~~~~~~  313 (413)
                      +++++.+
T Consensus        46 A~~~~tG   52 (330)
T KOG2991|consen   46 APGVRTG   52 (330)
T ss_pred             CCCCccc
Confidence            3344433

>KOG3598 consensus Thyroid hormone receptor-associated protein complex, subunit TRAP230 [Transcription]

Probab=87.87  E-value=0.29  Score=57.84  Aligned_cols=7  Identities=0%  Similarity=-0.268  Sum_probs=2.8

Q ss_pred             HHHHHhc
Q 015081           66 LEAKVEA   72 (413)
Q Consensus        66 L~~Ki~g   72 (413)
                      +++|-+.
T Consensus      1766 ~~p~pR~ 1772 (2220)
T KOG3598|consen 1766 VLPFPRD 1772 (2220)
T ss_pred             ccCCcch
Confidence            3444333

>PHA03420 E4 protein; Provisional

Probab=84.13  E-value=0.95  Score=40.07  Aligned_cols=14  Identities=36%  Similarity=0.313  Sum_probs=6.3

Q ss_pred             CcceeeecCCCCcc
Q 015081          379 HHTSIILDEDSYHV  392 (413)
Q Consensus       379 ~~~s~~l~~~~~~~  392 (413)
                      .+-.||-=+||--|
T Consensus       105 ~qE~ViPVedsVTV  118 (137)
T PHA03420        105 GQEVVIPVEDSVTV  118 (137)
T ss_pred             cceeEEecCCCeEE
Confidence            34444444455444

>PF04684 BAF1_ABF1: BAF1 / ABF1 chromatin reorganising factor; InterPro: IPR006774 ABF1 is a sequence-specific DNA binding protein involved in transcription activation, gene silencing and initiation of DNA replication

Probab=81.97  E-value=1.1  Score=47.82  Aligned_cols=8  Identities=38%  Similarity=0.717  Sum_probs=4.4

Q ss_pred             CCEEEEEE
Q 015081          201 GELVVSKI  208 (413)
Q Consensus       201 ~e~VLCKI  208 (413)
                      +.|||.||
T Consensus       187 ~~fvltki  194 (496)
T PF04684_consen  187 DKFVLTKI  194 (496)
T ss_pred             HHHHHhcc
Confidence            35566555

ABF1 is known to remodel chromatin, and it is proposed that it mediates its effects on transcription and gene expression by modifying local chromatin architecture []. These functions require a conserved stretch of 20 amino acids in the C-terminal region of ABF1 (amino acids 639 to 662 Saccharomyces cerevisiae (P14164 from SWISSPROT)) []. The N-terminal two thirds of the protein are necessary for DNA binding, and the N terminus (amino acids 9 to 91 in S. cerevisiae) is thought to contain a novel zinc-finger motif which may stabilise the protein structure [].; GO: 0003677 DNA binding, 0006338 chromatin remodeling, 0005634 nucleus

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	413
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		1e-11
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		9e-10
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		9e-10

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 64/147 (43%), Gaps = 20/147 (13%)
Query: 47  LGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGV 106
           L LP G +F PTD EL++H   +  A   + P P+I E          +    P  LP  
Sbjct: 13  LNLPPGFRFHPTDDELVEHYLCRKAAGQRL-PVPIIAEV--------DLYKFDPWDLPER 63
Query: 107 TRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCK 165
              G    +F  P  + Y  G+R  R          G   W  TG  +PV   G+  G K
Sbjct: 64  ALFGAREWYFFTPRDRKYPNGSRPNR--------AAGNGYWKATGADKPVAPRGRTLGIK 115
Query: 166 KILVLYTNFGKNRKPEKTNWVMHQYHL 192
           K LV Y   GK  +  KT+W+MH+Y L
Sbjct: 116 KALVFYA--GKAPRGVKTDWIMHEYRL 140

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 62/148 (41%), Gaps = 22/148 (14%)
Query: 47  LGLPAGVKFDPTDQEL-IDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPG 105
           L LP G +F PTD+EL + +L  K    D          F   +  E  +    P  LP 
Sbjct: 18  LSLPPGFRFYPTDEELMVQYLCRKAAGYD----------FSLQLIAEIDLYKFDPWVLPN 67
Query: 106 VTRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGC 164
               G    +F  P  + Y  G+R  R          G   W  TG  + +   G++ G 
Sbjct: 68  KALFGEKEWYFFSPRDRKYPNGSRPNR--------VAGSGYWKATGTDKIISTEGQRVGI 119
Query: 165 KKILVLYTNFGKNRKPEKTNWVMHQYHL 192
           KK LV Y   GK  K  KTNW+MH+Y L
Sbjct: 120 KKALVFY--IGKAPKGTKTNWIMHEYRL 145

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 62/148 (41%), Gaps = 22/148 (14%)
Query: 47  LGLPAGVKFDPTDQEL-IDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPG 105
           L LP G +F PTD+EL + +L  K    D          F   +  E  +    P  LP 
Sbjct: 15  LSLPPGFRFYPTDEELMVQYLCRKAAGYD----------FSLQLIAEIDLYKFDPWVLPN 64
Query: 106 VTRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGC 164
               G    +F  P  + Y  G+R  R          G   W  TG  + +   G++ G 
Sbjct: 65  KALFGEKEWYFFSPRDRKYPNGSRPNR--------VAGSGYWKATGTDKIISTEGQRVGI 116
Query: 165 KKILVLYTNFGKNRKPEKTNWVMHQYHL 192
           KK LV Y   GK  K  KTNW+MH+Y L
Sbjct: 117 KKALVFY--IGKAPKGTKTNWIMHEYRL 142
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	413
1ut7_A	171	No apical meristem protein; transcription regulati	8e-26
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	2e-24

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  101 bits (254), Expect = 8e-26
 Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 26/176 (14%)

Query: 47  LGLPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPG 105
           L LP G +F PTD+EL+   L  K              + I  I+    +    P  LP 
Sbjct: 15  LSLPPGFRFYPTDEELMVQYLCRKAAGY------DFSLQLIAEID----LYKFDPWVLPN 64

Query: 106 VTRDG-LSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGC 164
               G    +FF    + Y  G+R  R   +          W  TG  + +   G++ G 
Sbjct: 65  KALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGY--------WKATGTDKIISTEGQRVGI 116

Query: 165 KKILVLYTNFGKNRKPEKTNWVMHQYHL----GQHEEEKEGELVVSKIFYQTQPRQ 216
           KK LV Y   GK  K  KTNW+MH+Y L     ++   K  + V+ +I+ +    Q
Sbjct: 117 KKALVFYI--GKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQ 170

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score = 97.8 bits (244), Expect = 2e-24
 Identities = 46/174 (26%), Positives = 69/174 (39%), Gaps = 31/174 (17%)

Query: 47  LGLPAGVKFDPTDQELIDH-LEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPG 105
           L LP G +F PTD EL++H L  K   +       L    I  ++    +    P  LP 
Sbjct: 13  LNLPPGFRFHPTDDELVEHYLCRKAAGQ------RLPVPIIAEVD----LYKFDPWDLPE 62

Query: 106 VTR-DGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGC 164
                    +FF    + Y  G+R  R              W  TG  +PV   G+  G 
Sbjct: 63  RALFGAREWYFFTPRDRKYPNGSRPNRAAGNGY--------WKATGADKPVAPRGRTLGI 114

Query: 165 KKILVLYTNFGKNRKPEKTNWVMHQYHL---------GQHEEEKEGELVVSKIF 209
           KK LV Y   GK  +  KT+W+MH+Y L          +    +  + V+ +++
Sbjct: 115 KKALVFYA--GKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLY 166

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	413
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0
1qb3_A	150	Cyclin-dependent kinases regulatory subunit; cell	89.02

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=3e-47  Score=349.34  Aligned_cols=150  Identities=31%  Similarity=0.583  Sum_probs=125.5

Q ss_pred             CCCCCCCCCceeCCChHHHHH-HHHHHHhcCCCCCCCCcccccccccccCCCCCCCCCCCCCCcccCC-cceEEEecCCC
Q 015081           44 PDWLGLPAGVKFDPTDQELID-HLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDG-LSRHFFHRPSK  121 (413)
Q Consensus        44 ~~~~~LPpGfRF~PTDeELV~-yL~~Ki~g~~l~~~~Pl~~~~Ip~id~e~DIy~~ePwdLPg~~~~g-~~~yFF~~~~r  121 (413)
                      ...++|||||||+|||||||. ||++|+.+.++      +..+|+++    |||.++||+||+.+..| .+||||+.+.+
T Consensus        10 ~~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~------~~~~I~ev----Dvy~~~Pw~Lp~~~~~g~~ewYFFs~r~~   79 (174)
T 3ulx_A           10 EAELNLPPGFRFHPTDDELVEHYLCRKAAGQRL------PVPIIAEV----DLYKFDPWDLPERALFGAREWYFFTPRDR   79 (174)
T ss_dssp             CSTTTCCTTCCCCCCHHHHHHHTHHHHHHTCCC------SSSCCEEC----CGGGSCGGGSGGGCSSCSSEEEEEEECCC
T ss_pred             ccccCCCCcceeCCCHHHHHHHHHHHHhcCCCC------CcCeeeec----ccccCCchhhhhhhccCCceEEEEecccc
Confidence            456789999999999999999 59999998754      45677755    79999999999887544 57899999899


Q ss_pred             CCCCCCcccccccccccCCCCCcEEeecCCCceEEeCCEEeeeeEEEeeEeecCCCCCCCCCCeEEEEEEeCCCCcc---
Q 015081          122 AYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEE---  198 (413)
Q Consensus       122 k~~~G~R~rR~~~t~~~v~~g~G~Wk~tG~~k~I~~~G~~VG~KktL~FY~~~G~~~~g~kT~WvMhEYsL~~~~~~---  198 (413)
                      ||++|.|.+|++        ++||||++|++++|..+|.+||+||+|+||.  |+++++.||+|+||||+|......   
T Consensus        80 ky~~g~R~nR~t--------~~G~WkatG~dk~I~~~g~~vG~KktLvFy~--g~~p~g~kT~WvMhEY~L~~~~~~~~~  149 (174)
T 3ulx_A           80 KYPNGSRPNRAA--------GNGYWKATGADKPVAPRGRTLGIKKALVFYA--GKAPRGVKTDWIMHEYRLADAGRAAAG  149 (174)
T ss_dssp             -----CCSCEEE--------TTEEEEECSCCEEECCSSSCCEEEEEEEEEE--SSTTSCEEEEEEEEEEEECSCC-----
T ss_pred             ccCCCCCceeec--------CCceEccCCCCcEEeeCCcEEEEEEEEEEec--CCCCCCCcCCeEEEEEEeCCCCCcccc
Confidence            999999999986        5899999999999999899999999999998  888999999999999999986421   


Q ss_pred             ------cCCCEEEEEEEeeCC
Q 015081          199 ------KEGELVVSKIFYQTQ  213 (413)
Q Consensus       199 ------~~~e~VLCKIf~K~~  213 (413)
                            ..++|||||||+|+.
T Consensus       150 ~~~~~~~~~~wVlCrvf~K~~  170 (174)
T 3ulx_A          150 AKKGSLRLDDWVLCRLYNKKN  170 (174)
T ss_dssp             ------CCSSEEEEEEEESCC
T ss_pred             cccCCCCCCCEEEEEEEEcCC
Confidence                  357999999999864

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=2.1e-47  Score=349.58  Aligned_cols=152  Identities=33%  Similarity=0.542  Sum_probs=123.5

Q ss_pred             CCCCCCCCCCceeCCChHHHHH-HHHHHHhcCCCCCCCCcccccccccccCCCCCCCCCCCCCCcccCC-cceEEEecCC
Q 015081           43 KPDWLGLPAGVKFDPTDQELID-HLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDG-LSRHFFHRPS  120 (413)
Q Consensus        43 ~~~~~~LPpGfRF~PTDeELV~-yL~~Ki~g~~l~~~~Pl~~~~Ip~id~e~DIy~~ePwdLPg~~~~g-~~~yFF~~~~  120 (413)
                      ...++.|||||||+|||||||. ||++|+.+.++      +..+|+++    |||.+|||+||+....| .+||||+.+.
T Consensus        11 ~~~~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~------~~~~I~e~----Diy~~~Pw~Lp~~~~~g~~ewyFFs~r~   80 (171)
T 1ut7_A           11 PLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDF------SLQLIAEI----DLYKFDPWVLPNKALFGEKEWYFFSPRD   80 (171)
T ss_dssp             -CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCC------SSCCSEEC----CGGGSCGGGHHHHSSSCSSEEEEEEECC
T ss_pred             cccccCCCCcceeCCChHHHHHHHHHHHhcCCCC------CCCeEeec----ccccCChhHhhchhhcCCccEEEEeccc
Confidence            3678899999999999999999 59999998744      45678765    79999999999877544 5789999999


Q ss_pred             CCCCCCCcccccccccccCCCCCcEEeecCCCceEEeCCEEeeeeEEEeeEeecCCCCCCCCCCeEEEEEEeCCCCc---
Q 015081          121 KAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEE---  197 (413)
Q Consensus       121 rk~~~G~R~rR~~~t~~~v~~g~G~Wk~tG~~k~I~~~G~~VG~KktL~FY~~~G~~~~g~kT~WvMhEYsL~~~~~---  197 (413)
                      ++|++|.|.+|++        ++||||++|++++|..+|.+||+||+|+||.  |+++++.||+|+||||+|.....   
T Consensus        81 ~k~~~g~R~~R~t--------~~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~--g~~p~g~kT~WvMhEY~l~~~~~~~~  150 (171)
T 1ut7_A           81 RKYPNGSRPNRVA--------GSGYWKATGTDKIISTEGQRVGIKKALVFYI--GKAPKGTKTNWIMHEYRLIEPSRRNG  150 (171)
T ss_dssp             C-------CCEEE--------TTEEEEEEEEEEEEEETTEEEEEEEEEEEEE--SSTTSCEEEEEEEEEEEECCCC----
T ss_pred             cccCCCCcccccC--------CCCEEeccCCCceEEecCcEEEEEEEEEEEc--CcCCCCCcCCeEEEEEEcCCCccccC
Confidence            9999999999986        5899999999999999999999999999999  88899999999999999998642   


Q ss_pred             -ccCCCEEEEEEEeeCCc
Q 015081          198 -EKEGELVVSKIFYQTQP  214 (413)
Q Consensus       198 -~~~~e~VLCKIf~K~~~  214 (413)
                       ...++|||||||+|...
T Consensus       151 ~~~~~~~VlCrv~~k~~~  168 (171)
T 1ut7_A          151 STKLDDWVLCRIYKKQSS  168 (171)
T ss_dssp             ----CCEEEEEEEECC--
T ss_pred             cccCCCEEEEEEEEcCCC
Confidence             24579999999999754

>1qb3_A Cyclin-dependent kinases regulatory subunit; cell cycle mutagenesis domain swapping, cyclin-dependent KIN cycle; 3.00A {Saccharomyces cerevisiae} SCOP: d.97.1.1

Probab=89.02  E-value=0.066  Score=47.36  Aligned_cols=15  Identities=13%  Similarity=0.328  Sum_probs=10.6

Q ss_pred             CCCCeEEEEEEeCCC
Q 015081          181 EKTNWVMHQYHLGQH  195 (413)
Q Consensus       181 ~kT~WvMhEYsL~~~  195 (413)
                      ..-+|+..+++-..+
T Consensus        81 QS~GW~HYmih~PEP   95 (150)
T 1qb3_A           81 QSLGWEHYECHAPEP   95 (150)
T ss_dssp             CCTTCEEESCCCCCT
T ss_pred             cCcCcEEeeecCCCC
Confidence            346799988876644

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	413
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	1e-39

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  137 bits (346), Expect = 1e-39
 Identities = 48/182 (26%), Positives = 71/182 (39%), Gaps = 24/182 (13%)

Query: 35  GCGHKLEAKPDWLGLPAGVKFDPTDQELIDHLEAKVEAKDMVKPHPLIDEFIPTIEGEDG 94
             G +       L LP G +F PTD+EL+     +         +    + I     E  
Sbjct: 3   HMGIQETDPLTQLSLPPGFRFYPTDEELMVQYLCR-----KAAGYDFSLQLIA----EID 53

Query: 95  ICYTHPEKLPGVTRDGLSRHFFHRP-SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTR 153
           +    P  LP     G    +F  P  + Y  G+R  R          G   W  TG  +
Sbjct: 54  LYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVA--------GSGYWKATGTDK 105

Query: 154 PVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEE----KEGELVVSKIF 209
            +   G++ G KK LV Y   GK  K  KTNW+MH+Y L +        K  + V+ +I+
Sbjct: 106 IISTEGQRVGIKKALVFY--IGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIY 163

Query: 210 YQ 211
            +
Sbjct: 164 KK 165

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	413
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.5e-45  Score=330.65  Aligned_cols=151  Identities=32%  Similarity=0.528  Sum_probs=121.7

Q ss_pred             CCCCCCCCCCCceeCCChHHHHH-HHHHHHhcCCCCCCCCcccccccccccCCCCCCCCCCCCCCcccC-CcceEEEecC
Q 015081           42 AKPDWLGLPAGVKFDPTDQELID-HLEAKVEAKDMVKPHPLIDEFIPTIEGEDGICYTHPEKLPGVTRD-GLSRHFFHRP  119 (413)
Q Consensus        42 ~~~~~~~LPpGfRF~PTDeELV~-yL~~Ki~g~~l~~~~Pl~~~~Ip~id~e~DIy~~ePwdLPg~~~~-g~~~yFF~~~  119 (413)
                      ..+..++|||||||+|||||||. ||++|+.+.+      ++.++|+++    |||+++||+||+.... +++||||+.+
T Consensus        10 ~~~~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~------l~~~~I~~~----Dvy~~~Pw~Lp~~~~~~~~~wyFft~~   79 (166)
T d1ut7a_          10 DPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYD------FSLQLIAEI----DLYKFDPWVLPNKALFGEKEWYFFSPR   79 (166)
T ss_dssp             --CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCC------CSSCCSEEC----CGGGSCGGGHHHHSSSCSSEEEEEEEC
T ss_pred             CccccccCCCccccCCCcHHHHHHHHHHHHcCCC------CCcccceec----cCCcCChhhccchhccCcceEEEEeee
Confidence            45678899999999999999998 5999998864      456788765    7999999999987643 4568999988


Q ss_pred             CCCCCCCCcccccccccccCCCCCcEEeecCCCceEEeCCEEeeeeEEEeeEeecCCCCCCCCCCeEEEEEEeCCCCc--
Q 015081          120 SKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEE--  197 (413)
Q Consensus       120 ~rk~~~G~R~rR~~~t~~~v~~g~G~Wk~tG~~k~I~~~G~~VG~KktL~FY~~~G~~~~g~kT~WvMhEYsL~~~~~--  197 (413)
                      .+++++|.|.+|++        ++|+||.+|+++.|..+|.+||+||+|+||.  |+.+.+.+|+|+||||+|.+...  
T Consensus        80 ~~k~~~g~r~~R~~--------g~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~--~~~~~~~~t~W~M~EY~l~~~~~~~  149 (166)
T d1ut7a_          80 DRKYPNGSRPNRVA--------GSGYWKATGTDKIISTEGQRVGIKKALVFYI--GKAPKGTKTNWIMHEYRLIEPSRRN  149 (166)
T ss_dssp             CC-------CCEEE--------TTEEEEEEEEEEEEEETTEEEEEEEEEEEEE--SSTTSCEEEEEEEEEEEECCCC---
T ss_pred             ccccCCCCcccccc--------CCCEecccCCCceEecCCcEEEEEEEEEEEe--cCCCCCCccCeEEEEEecCCccccc
Confidence            88999999999985        5899999999999999999999999999998  78889999999999999987642  


Q ss_pred             --ccCCCEEEEEEEeeC
Q 015081          198 --EKEGELVVSKIFYQT  212 (413)
Q Consensus       198 --~~~~e~VLCKIf~K~  212 (413)
                        ...++|||||||+|+
T Consensus       150 ~~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_         150 GSTKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             -----CCEEEEEEEECC
T ss_pred             CccccCCEEEEEEEecC
Confidence              235689999999884