Citrus Sinensis ID: 015106

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410---
MDLSTVLRVKTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ
ccEEEEEccEEEEcHHHHHHcccHHHHHHHccccccccccEEEEEEccccHHHHHHHHHcccccEEEEccccHHHHHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHcccHHHHHHHHcccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccHHHHHHHcccccccHHHHHHHHHHHHHcccccHHHHHcHHHcccccccEEEEcccccEEcEEEEEEEcccccEEEEcccccccccEEEEccEEEEEEEEEcccEEEEEEEEcccccccEEEEEccccccccccEEEEEEEEEEEEcccccccccccccEEEEcccccccccccccccccEEEcccccEEEccEEEEEEEEEEcc
ccccEEEEEEcEEccHEEEEcccHHHHHHHcccccHccccEEEEEEccccHHHHHHHHHHHHccEEEEcccHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccccHHHHHHHHHHHHHHcccHHHHHHHccccccccccEEcccccccccEEEEEEccccccEEEEEcccHHHHHHHccccEEEEEEEEEccccEEEEEEcccccccccEEEEEEEEEcccccEEEEEEEEEEEEccccccEEEcEcccEEEccccEcccccccccccHHHHcccccEHEccEEEEEEEEEEcc
MDLSTVLRVKTVhisspilaakspFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYsstlstttpTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESAllyldlpssvlmadavqpLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVlasddlqiasEDAVYDFALKWARTHYPKLEERREILGSRLgrlirfpymTCRKLKKvltcndfdpelaSKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERaykyrpvkvvefelprqqcvVYLDLKreecahlfpagriysqafhlggqgfflsahcnmdqqssfhcfglflgmqekgsvSFAVDYEFaarikpteeyVSKYkgnytftggkavgyrnlfgipwtafmaddsiyfINGNLHLRAELTIRQ
MDLSTVLRVKtvhisspilaakspFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARthypkleerreilgsrlgrlirfpYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQRalaaeeanstyRRFVERAYKYrpvkvvefelprQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAArikpteeyvskYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ
MDLSTVLRVKTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYsstlstttptallDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ
*****VLRVKTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAEL****
MDLSTVLRVKTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFF**********************FVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIR*
MDLSTVLRVKTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ
*DLSTVLRVKTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ
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MDLSTVLRVKTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query413 2.2.26 [Sep-21-2011]
Q9FPW6561 BTB/POZ domain-containing yes no 1.0 0.736 0.835 0.0
O82343561 BTB/POZ domain-containing no no 1.0 0.736 0.833 0.0
O04615527 BTB/POZ domain-containing no no 0.990 0.776 0.639 1e-148
Q8NFY9 601 Kelch repeat and BTB doma yes no 0.457 0.314 0.272 1e-11
B1H285 575 Kelch repeat and BTB doma yes no 0.438 0.314 0.273 2e-11
Q3UQV5 599 Kelch repeat and BTB doma yes no 0.479 0.330 0.263 3e-11
Q6TDP4 642 Kelch-like protein 17 OS= no no 0.467 0.300 0.271 9e-11
O94889 574 Kelch-like protein 18 OS= no no 0.372 0.268 0.293 2e-10
Q3ZB90 623 Kelch repeat and BTB doma no no 0.462 0.306 0.277 3e-10
Q8K430 640 Kelch-like protein 17 OS= no no 0.467 0.301 0.271 3e-10
>sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana GN=POB1 PE=2 SV=2 Back     alignment and function desciption
 Score =  727 bits (1877), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/413 (83%), Positives = 382/413 (92%)

Query: 1   MDLSTVLRVKTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNF 60
           MD STV+RVK +HISSPILAAKSPFFYKLFSNGMRESEQR+VTLRI+ASEEAALMELLNF
Sbjct: 145 MDCSTVVRVKELHISSPILAAKSPFFYKLFSNGMRESEQRHVTLRINASEEAALMELLNF 204

Query: 61  MYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMA 120
           MYS+ +S TT  ALLDVLMAADKFEVASCMRYCSRLLRN+PMT ESALLYL+LPSSVLMA
Sbjct: 205 MYSNAVSVTTAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMA 264

Query: 121 DAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKW 180
            AVQPLTD AKQFLAARYKDI+KF EEV++LPLAGIEA+L+SD+LQIASEDAVYDF LKW
Sbjct: 265 KAVQPLTDAAKQFLAARYKDITKFHEEVMSLPLAGIEAILSSDELQIASEDAVYDFILKW 324

Query: 181 ARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAE 240
           AR  YP LEERREILGSRL   IRFP+MTCRKLKKVLTC+DF+ E+ASK+VLE+LFFKAE
Sbjct: 325 ARAQYPCLEERREILGSRLALSIRFPFMTCRKLKKVLTCSDFEHEIASKLVLEALFFKAE 384

Query: 241 TPYRQRALAAEEANSTYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAG 300
            P+RQR+LA+EE+ S  RR +ERAYKYRPVKVVEFELPR QCVVYLDLKREEC  LFP+G
Sbjct: 385 APHRQRSLASEESASLNRRLIERAYKYRPVKVVEFELPRPQCVVYLDLKREECGGLFPSG 444

Query: 301 RIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEE 360
           R+YSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSF VDYEF+AR KP E+
Sbjct: 445 RVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFGVDYEFSARSKPAED 504

Query: 361 YVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ 413
           ++SKYKGNYTFTGGKAVGYRNLFG+PWT+F+A+DS YFING LHLRAELTI++
Sbjct: 505 FISKYKGNYTFTGGKAVGYRNLFGVPWTSFIAEDSQYFINGILHLRAELTIKR 557
May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
Arabidopsis thaliana (taxid: 3702)
>sp|O82343|Y2626_ARATH BTB/POZ domain-containing protein At2g46260 OS=Arabidopsis thaliana GN=At2g46260 PE=2 SV=2 Back     alignment and function description
>sp|O04615|Y4116_ARATH BTB/POZ domain-containing protein At4g01160 OS=Arabidopsis thaliana GN=At4g01160 PE=3 SV=1 Back     alignment and function description
>sp|Q8NFY9|KBTB8_HUMAN Kelch repeat and BTB domain-containing protein 8 OS=Homo sapiens GN=KBTBD8 PE=2 SV=2 Back     alignment and function description
>sp|B1H285|KBTB8_RAT Kelch repeat and BTB domain-containing protein 8 OS=Rattus norvegicus GN=Kbtbd8 PE=2 SV=1 Back     alignment and function description
>sp|Q3UQV5|KBTB8_MOUSE Kelch repeat and BTB domain-containing protein 8 OS=Mus musculus GN=Kbtbd8 PE=2 SV=1 Back     alignment and function description
>sp|Q6TDP4|KLH17_HUMAN Kelch-like protein 17 OS=Homo sapiens GN=KLHL17 PE=2 SV=1 Back     alignment and function description
>sp|O94889|KLH18_HUMAN Kelch-like protein 18 OS=Homo sapiens GN=KLHL18 PE=2 SV=3 Back     alignment and function description
>sp|Q3ZB90|KBTBC_DANRE Kelch repeat and BTB domain-containing protein 12 OS=Danio rerio GN=kbtbd12 PE=2 SV=1 Back     alignment and function description
>sp|Q8K430|KLH17_RAT Kelch-like protein 17 OS=Rattus norvegicus GN=Klhl17 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query413
147798263 526 hypothetical protein VITISV_008241 [Viti 0.992 0.779 0.895 0.0
225454420 553 PREDICTED: BTB/POZ domain-containing pro 1.0 0.746 0.864 0.0
297745384501 unnamed protein product [Vitis vinifera] 1.0 0.824 0.864 0.0
255541774 549 atpob1, putative [Ricinus communis] gi|2 1.0 0.752 0.857 0.0
356573187 553 PREDICTED: BTB/POZ domain-containing pro 0.997 0.745 0.861 0.0
356506034 553 PREDICTED: BTB/POZ domain-containing pro 0.997 0.745 0.857 0.0
224127832 547 predicted protein [Populus trichocarpa] 0.997 0.753 0.851 0.0
229368448 552 BTB/POZ protein [Nicotiana benthamiana] 0.997 0.746 0.847 0.0
449432076 553 PREDICTED: BTB/POZ domain-containing pro 1.0 0.746 0.852 0.0
224064139 556 predicted protein [Populus trichocarpa] 1.0 0.742 0.847 0.0
>gi|147798263|emb|CAN63457.1| hypothetical protein VITISV_008241 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  768 bits (1983), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/413 (89%), Positives = 390/413 (94%), Gaps = 3/413 (0%)

Query: 1   MDLSTVLRVKTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNF 60
           MD STVLRVKT+HISSPILAAKSPFFYKLFSNGMRESEQR+VTLRIHAS      + L+ 
Sbjct: 117 MDCSTVLRVKTLHISSPILAAKSPFFYKLFSNGMRESEQRHVTLRIHAS--GKYTKTLSL 174

Query: 61  MYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMA 120
            ++ TLSTTTPTALLDVLMAADKFEVASCMRYCSR+LRNLPMTCESALLYLDLPSSVLMA
Sbjct: 175 FFN-TLSTTTPTALLDVLMAADKFEVASCMRYCSRMLRNLPMTCESALLYLDLPSSVLMA 233

Query: 121 DAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKW 180
           +AVQPLTD AKQFLA RYKD++KFQEEVLNLPLAGIEAVL+SDDLQ+ASEDAVYDF LKW
Sbjct: 234 EAVQPLTDAAKQFLAGRYKDVTKFQEEVLNLPLAGIEAVLSSDDLQVASEDAVYDFVLKW 293

Query: 181 ARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAE 240
           AR HYPKLE+RREILGSRLGRLIRFPYMTCRKLKKVLTCNDFD ELASKVVLE+LFFKAE
Sbjct: 294 ARIHYPKLEDRREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDTELASKVVLEALFFKAE 353

Query: 241 TPYRQRALAAEEANSTYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAG 300
            PYRQR+LAAEEA+S+YRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREEC +LFPAG
Sbjct: 354 APYRQRSLAAEEASSSYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECLNLFPAG 413

Query: 301 RIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEE 360
           R+YSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSV+FAVDYEFAAR KPTEE
Sbjct: 414 RVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVTFAVDYEFAARSKPTEE 473

Query: 361 YVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ 413
           YVSKYKGNYTFTGGKAVGYRNLFGI W AFMADDS YFING LHLRAELTIRQ
Sbjct: 474 YVSKYKGNYTFTGGKAVGYRNLFGIAWXAFMADDSHYFINGILHLRAELTIRQ 526

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225454420|ref|XP_002279915.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297745384|emb|CBI40464.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255541774|ref|XP_002511951.1| atpob1, putative [Ricinus communis] gi|223549131|gb|EEF50620.1| atpob1, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356573187|ref|XP_003554745.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] Back     alignment and taxonomy information
>gi|356506034|ref|XP_003521793.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] Back     alignment and taxonomy information
>gi|224127832|ref|XP_002320175.1| predicted protein [Populus trichocarpa] gi|222860948|gb|EEE98490.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|229368448|gb|ACQ59090.1| BTB/POZ protein [Nicotiana benthamiana] Back     alignment and taxonomy information
>gi|449432076|ref|XP_004133826.1| PREDICTED: BTB/POZ domain-containing protein At2g46260-like [Cucumis sativus] gi|449480287|ref|XP_004155851.1| PREDICTED: BTB/POZ domain-containing protein At2g46260-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224064139|ref|XP_002301391.1| predicted protein [Populus trichocarpa] gi|222843117|gb|EEE80664.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query413
TAIR|locus:2082827561 POB1 "POZ/BTB containin G-prot 1.0 0.736 0.818 3.3e-182
TAIR|locus:2063026561 LRB1 "light-response BTB 1" [A 1.0 0.736 0.814 3.9e-179
UNIPROTKB|Q6TDP4 642 KLHL17 "Kelch-like protein 17" 0.467 0.300 0.276 1.9e-10
MGI|MGI:2678948 640 Klhl17 "kelch-like 17" [Mus mu 0.467 0.301 0.280 4.1e-10
RGD|708444 640 Klhl17 "kelch-like family memb 0.467 0.301 0.280 4.1e-10
UNIPROTKB|A4FV78 606 KBTBD10 "Uncharacterized prote 0.535 0.364 0.284 1.1e-09
UNIPROTKB|O60662 606 KLHL41 "Kelch-like protein 41" 0.535 0.364 0.280 1.1e-09
UNIPROTKB|F1PMV5 650 KBTBD10 "Uncharacterized prote 0.535 0.34 0.284 1.5e-09
MGI|MGI:2661430 599 Kbtbd8 "kelch repeat and BTB ( 0.460 0.317 0.264 3.7e-09
FB|FBgn0037978 575 KLHL18 [Drosophila melanogaste 0.460 0.330 0.255 9.6e-09
TAIR|locus:2082827 POB1 "POZ/BTB containin G-protein 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1768 (627.4 bits), Expect = 3.3e-182, P = 3.3e-182
 Identities = 338/413 (81%), Positives = 373/413 (90%)

Query:     1 MDLSTVLRVKTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNF 60
             MD STV+RVK +HISSPILAAKSPFFYKLFSNGMRESEQR+VTLRI+ASEEAALMELLNF
Sbjct:   145 MDCSTVVRVKELHISSPILAAKSPFFYKLFSNGMRESEQRHVTLRINASEEAALMELLNF 204

Query:    61 MYXXXXXXXXXXXXXDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMA 120
             MY             DVLMAADKFEVASCMRYCSRLLRN+PMT ESALLYL+LPSSVLMA
Sbjct:   205 MYSNAVSVTTAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMA 264

Query:   121 DAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKW 180
              AVQPLTD AKQFLAARYKDI+KF EEV++LPLAGIEA+L+SD+LQIASEDAVYDF LKW
Sbjct:   265 KAVQPLTDAAKQFLAARYKDITKFHEEVMSLPLAGIEAILSSDELQIASEDAVYDFILKW 324

Query:   181 ARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAE 240
             AR  YP LEERREILGSRL   IRFP+MTCRKLKKVLTC+DF+ E+ASK+VLE+LFFKAE
Sbjct:   325 ARAQYPCLEERREILGSRLALSIRFPFMTCRKLKKVLTCSDFEHEIASKLVLEALFFKAE 384

Query:   241 TPYRQRALAAEEANSTYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAG 300
              P+RQR+LA+EE+ S  RR +ERAYKYRPVKVVEFELPR QCVVYLDLKREEC  LFP+G
Sbjct:   385 APHRQRSLASEESASLNRRLIERAYKYRPVKVVEFELPRPQCVVYLDLKREECGGLFPSG 444

Query:   301 RIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEE 360
             R+YSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSF VDYEF+AR KP E+
Sbjct:   445 RVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFGVDYEFSARSKPAED 504

Query:   361 YVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ 413
             ++SKYKGNYTFTGGKAVGYRNLFG+PWT+F+A+DS YFING LHLRAELTI++
Sbjct:   505 FISKYKGNYTFTGGKAVGYRNLFGVPWTSFIAEDSQYFINGILHLRAELTIKR 557
GO:0005737 "cytoplasm" evidence=ISM
GO:0009954 "proximal/distal pattern formation" evidence=RCA
GO:0010227 "floral organ abscission" evidence=RCA
GO:0048439 "flower morphogenesis" evidence=RCA
GO:0005515 "protein binding" evidence=IPI
GO:0005634 "nucleus" evidence=IDA
GO:0010114 "response to red light" evidence=IGI
GO:0042803 "protein homodimerization activity" evidence=IPI
GO:0046982 "protein heterodimerization activity" evidence=IPI
TAIR|locus:2063026 LRB1 "light-response BTB 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q6TDP4 KLHL17 "Kelch-like protein 17" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2678948 Klhl17 "kelch-like 17" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|708444 Klhl17 "kelch-like family member 17" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|A4FV78 KBTBD10 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|O60662 KLHL41 "Kelch-like protein 41" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1PMV5 KBTBD10 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:2661430 Kbtbd8 "kelch repeat and BTB (POZ) domain containing 8" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
FB|FBgn0037978 KLHL18 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FPW6POB1_ARATHNo assigned EC number0.83531.00.7361yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query413
smart0022597 smart00225, BTB, Broad-Complex, Tramtrack and Bric 5e-11
smart00875101 smart00875, BACK, BTB And C-terminal Kelch 8e-10
pfam07707101 pfam07707, BACK, BTB And C-terminal Kelch 5e-09
PHA03098 534 PHA03098, PHA03098, kelch-like protein; Provisiona 2e-08
pfam00651101 pfam00651, BTB, BTB/POZ domain 9e-07
cd13342147 cd13342, PH-GRAM_MTMR4, Myotubularian (MTM) relate 0.004
>gnl|CDD|197585 smart00225, BTB, Broad-Complex, Tramtrack and Bric a brac Back     alignment and domain information 
 Score = 58.9 bits (143), Expect = 5e-11
 Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 7/98 (7%)

Query: 6   VLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLR-IHASEEAALMELLNFMY 62
            L V  K  H    +LAA SP+F  LFS+  +ES++  + L  +          LLNF+Y
Sbjct: 3   TLVVGGKKFHAHKAVLAAHSPYFKALFSSDFKESDKSEIYLDDVSPE---DFRALLNFLY 59

Query: 63  SSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNL 100
           +  L       + ++L  AD  ++   +  C   L  L
Sbjct: 60  TGKLD-LPEENVEELLELADYLQIPGLVELCEEFLLKL 96

Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures. Length = 97
>gnl|CDD|197943 smart00875, BACK, BTB And C-terminal Kelch Back     alignment and domain information
>gnl|CDD|149006 pfam07707, BACK, BTB And C-terminal Kelch Back     alignment and domain information
>gnl|CDD|222983 PHA03098, PHA03098, kelch-like protein; Provisional Back     alignment and domain information
>gnl|CDD|216043 pfam00651, BTB, BTB/POZ domain Back     alignment and domain information
>gnl|CDD|241496 cd13342, PH-GRAM_MTMR4, Myotubularian (MTM) related 4 protein (MTMR4) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 413
KOG4441 571 consensus Proteins containing BTB/POZ and Kelch do 100.0
PHA02713 557 hypothetical protein; Provisional 100.0
PHA02790480 Kelch-like protein; Provisional 100.0
PHA03098534 kelch-like protein; Provisional 100.0
KOG4350 620 consensus Uncharacterized conserved protein, conta 99.97
KOG2075521 consensus Topoisomerase TOP1-interacting protein B 99.9
KOG4682488 consensus Uncharacterized conserved protein, conta 99.82
PF07707103 BACK: BTB And C-terminal Kelch; InterPro: IPR01170 99.74
PF00651111 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB ( 99.71
smart0022590 BTB Broad-Complex, Tramtrack and Bric a brac. Doma 99.65
smart00875101 BACK BTB And C-terminal Kelch. The BACK domain is 99.65
KOG4591280 consensus Uncharacterized conserved protein, conta 99.64
KOG0783 1267 consensus Uncharacterized conserved protein, conta 99.47
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 98.34
KOG0783 1267 consensus Uncharacterized conserved protein, conta 98.22
KOG0511516 consensus Ankyrin repeat protein [General function 98.22
PHA03098534 kelch-like protein; Provisional 98.2
PHA02790480 Kelch-like protein; Provisional 97.88
KOG2716230 consensus Polymerase delta-interacting protein PDI 97.88
PHA02713557 hypothetical protein; Provisional 97.86
PF11822317 DUF3342: Domain of unknown function (DUF3342); Int 97.69
PF0221494 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassi 97.6
KOG2838401 consensus Uncharacterized conserved protein, conta 97.46
KOG2838401 consensus Uncharacterized conserved protein, conta 97.44
smart0061247 Kelch Kelch domain. 97.24
KOG1987297 consensus Speckle-type POZ protein SPOP and relate 97.01
KOG3473112 consensus RNA polymerase II transcription elongati 96.89
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 96.65
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 96.48
smart00512104 Skp1 Found in Skp1 protein family. Family of Skp1 96.31
PLN02153341 epithiospecifier protein 96.03
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 96.02
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 95.99
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 95.87
cd03774139 MATH_SPOP Speckle-type POZ protein (SPOP) family, 95.84
KOG4693 392 consensus Uncharacterized conserved protein, conta 95.69
PLN02153341 epithiospecifier protein 95.42
cd03772137 MATH_HAUSP Herpesvirus-associated ubiquitin-specif 95.41
PF1396450 Kelch_6: Kelch motif 95.41
KOG1665302 consensus AFH1-interacting protein FIP2, contains 95.26
PF00917119 MATH: MATH domain; InterPro: IPR002083 Although ap 95.18
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 95.17
KOG2714465 consensus SETA binding protein SB1 and related pro 94.95
PLN02193470 nitrile-specifier protein 94.82
KOG1724162 consensus SCF ubiquitin ligase, Skp1 component [Po 94.66
cd00121126 MATH MATH (meprin and TRAF-C homology) domain; an 94.53
KOG0379 482 consensus Kelch repeat-containing proteins [Genera 93.99
PLN02193470 nitrile-specifier protein 93.82
PF1341549 Kelch_3: Galactose oxidase, central domain 93.73
KOG0379 482 consensus Kelch repeat-containing proteins [Genera 93.06
PF0393162 Skp1_POZ: Skp1 family, tetramerisation domain; Int 92.99
cd03775134 MATH_Ubp21p Ubiquitin-specific protease 21 (Ubp21p 92.78
PF1385442 Kelch_5: Kelch motif 92.45
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 92.24
cd03773132 MATH_TRIM37 Tripartite motif containing protein 37 92.22
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 92.02
PF1396450 Kelch_6: Kelch motif 91.23
PF0146678 Skp1: Skp1 family, dimerisation domain; InterPro: 91.23
PF0764649 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is 87.74
KOG2715210 consensus Uncharacterized conserved protein, conta 87.42
KOG0511516 consensus Ankyrin repeat protein [General function 87.41
KOG4693392 consensus Uncharacterized conserved protein, conta 86.91
COG5201158 SKP1 SCF ubiquitin ligase, SKP1 component [Posttra 84.74
PLN02772 398 guanylate kinase 83.53
KOG1778319 consensus CREB binding protein/P300 and related TA 80.27
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information 
Probab=100.00  E-value=1.5e-54  Score=449.49  Aligned_cols=290  Identities=21%  Similarity=0.376  Sum_probs=270.5

Q ss_pred             CCCcEEEEE--eEEEeehhhhcccCHHHHHhhcCCCCCCCccEEEEecCCCCHHHHHHHHHHHccCcccCCChhhHHHHH
Q 015106            1 MDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVL   78 (413)
Q Consensus         1 ~~cDV~l~v--~~f~aHk~iLaa~S~yF~~mf~~~~~Es~~~~i~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~LL   78 (413)
                      .+|||+|.+  ++|+|||.||||+||||++||+++++|+.+++|+|.  ++++.+++.+++|+|||++.|+. +||++||
T Consensus        35 ~lcDv~L~v~~~~~~aHR~VLAa~S~YFraMFt~~l~e~~~~~i~l~--~v~~~~l~~ll~y~Yt~~i~i~~-~nVq~ll  111 (571)
T KOG4441|consen   35 LLCDVTLLVGDREFPAHRVVLAACSPYFRAMFTSGLKESKQKEINLE--GVDPETLELLLDYAYTGKLEISE-DNVQELL  111 (571)
T ss_pred             CCceEEEEECCeeechHHHHHHhccHHHHHHhcCCcccccceEEEEe--cCCHHHHHHHHHHhhcceEEech-HhHHHHH
Confidence            379999999  579999999999999999999999999999999999  89999999999999999999998 9999999


Q ss_pred             HHHhhhchhhHHHHHhHchhccCCChhhHHHHhhcccchHhhhccHHHHHHHHHHHHhhcccccccchhhcCCCHHHHHH
Q 015106           79 MAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEA  158 (413)
Q Consensus        79 ~aA~~lqv~~L~~~C~~~L~~~~l~~~n~l~i~~~a~~~~~~~~~~~L~~~a~~fI~~nf~~v~~~~~efl~L~~~~l~~  158 (413)
                      .+|++||++.+++.|++||.+ +++++||+.+..+|+    .+++.+|.+.+..||.+||.++.+ ++||++||.+++..
T Consensus       112 ~aA~~lQi~~v~~~C~~fL~~-~l~~~Nclgi~~~a~----~~~~~~L~~~a~~~i~~~F~~v~~-~eefl~L~~~~l~~  185 (571)
T KOG4441|consen  112 EAASLLQIPEVVDACCEFLES-QLDPSNCLGIRRFAE----LHSCTELLEVADEYILQHFAEVSK-TEEFLLLSLEELIG  185 (571)
T ss_pred             HHHHHhhhHHHHHHHHHHHHh-cCCHHHHHHHHHHHH----hcCcHHHHHHHHHHHHHHHHHHhc-cHHhhCCCHHHHHh
Confidence            999999999999999999999 899999999999986    579999999999999999999999 99999999999999


Q ss_pred             hhcCCCCCCCChHHHHHHHHHHHHhcCCChHHHHHHHHHHhhccccCCCCCHHHHHhhccCCCCCc--hHHHHHHHHHHH
Q 015106          159 VLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDP--ELASKVVLESLF  236 (413)
Q Consensus       159 lL~sd~L~v~sE~~v~~av~~Wi~~~~~~~~~R~~~l~~~Ll~~VRf~lls~~~L~~~~~~~~~~~--~~~~~lv~ea~~  236 (413)
                      ||++|.|+|.+|.+||+++++|+++|   .++|++++ +.++++||+|+|++++|.+.+...+++.  ..|++++.+|++
T Consensus       186 ll~~d~l~v~~E~~vf~a~~~Wv~~d---~~~R~~~~-~~ll~~vr~~ll~~~~l~~~v~~~~~~~~~~~c~~~l~ea~~  261 (571)
T KOG4441|consen  186 LLSSDDLNVDSEEEVFEAAMRWVKHD---FEEREEHL-PALLEAVRLPLLPPQFLVEIVESEPLIKRDSACRDLLDEAKK  261 (571)
T ss_pred             hccccCCCcCCHHHHHHHHHHHHhcC---HhhHHHHH-HHHHHhcCccCCCHHHHHHHHhhhhhhccCHHHHHHHHHHHH
Confidence            99999999999999999999999998   78899999 9999999999999999999999888764  789999999999


Q ss_pred             hhcCCcchhhhhhhccccCCCc-ccceEEEEec-------CCceEEEecCCCCeeEe---ccccccceeEEeeCCeEEEe
Q 015106          237 FKAETPYRQRALAAEEANSTYR-RFVERAYKYR-------PVKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQ  305 (413)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~r-~~~~~l~~~~-------~~~~ve~ydp~~~~W~~---l~~~r~~~~~~~~~g~iY~~  305 (413)
                      ||..| .+++.++.++++|  | ...+.||+.+       ...+||+|||.+++|..   ||.+|.++++++++|+||++
T Consensus       262 ~~~~~-~~~~~~~~~~t~~--r~~~~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~~lYv~  338 (571)
T KOG4441|consen  262 YHLLP-QRRPVMQSPRTRP--RRSVSGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVLNGKLYVV  338 (571)
T ss_pred             HhhCc-ccCccccCCCccc--CcCCCCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEECCEEEEE
Confidence            99875 4556688899988  7 4557888732       35789999999999999   99999999999999999994


Q ss_pred             e
Q 015106          306 A  306 (413)
Q Consensus       306 ~  306 (413)
                      |
T Consensus       339 G  339 (571)
T KOG4441|consen  339 G  339 (571)
T ss_pred             c
Confidence            4

>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>KOG4350 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>KOG2075 consensus Topoisomerase TOP1-interacting protein BTBD1 [Function unknown] Back     alignment and domain information
>KOG4682 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>PF07707 BACK: BTB And C-terminal Kelch; InterPro: IPR011705 This domain is found associated with (IPR000210 from INTERPRO) and (IPR006652 from INTERPRO) Back     alignment and domain information
>PF00651 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (for BR-C, ttk and bab) [] or POZ (for Pox virus and Zinc finger) [] domain is present near the N terminus of a fraction of zinc finger (IPR007087 from INTERPRO) proteins and in proteins that contain the IPR006652 from INTERPRO motif such as Kelch and a family of pox virus proteins Back     alignment and domain information
>smart00225 BTB Broad-Complex, Tramtrack and Bric a brac Back     alignment and domain information
>smart00875 BACK BTB And C-terminal Kelch Back     alignment and domain information
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] Back     alignment and domain information
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] Back     alignment and domain information
>KOG0511 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>KOG2716 consensus Polymerase delta-interacting protein PDIP1 and related proteins, contain BTB/POZ domain [Inorganic ion transport and metabolism] Back     alignment and domain information
>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>PF11822 DUF3342: Domain of unknown function (DUF3342); InterPro: IPR021777 This family of proteins are functionally uncharacterised Back     alignment and domain information
>PF02214 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassium channels are the most diverse group of the ion channel family [, ] Back     alignment and domain information
>KOG2838 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>KOG2838 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>smart00612 Kelch Kelch domain Back     alignment and domain information
>KOG1987 consensus Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains [Cell cycle control, cell division, chromosome partitioning; General function prediction only] Back     alignment and domain information
>KOG3473 consensus RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin C [Transcription] Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>smart00512 Skp1 Found in Skp1 protein family Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>cd03774 MATH_SPOP Speckle-type POZ protein (SPOP) family, MATH domain; composed of proteins with similarity to human SPOP Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>cd03772 MATH_HAUSP Herpesvirus-associated ubiquitin-specific protease (HAUSP, also known as USP7) family, N-terminal MATH (TRAF-like) domain; composed of proteins similar to human HAUSP, an enzyme that specifically catalyzes the deubiquitylation of p53 and MDM2, hence playing an important role in the p53-MDM2 pathway Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>KOG1665 consensus AFH1-interacting protein FIP2, contains BTB/POZ domain and pentapeptide repeats [General function prediction only] Back     alignment and domain information
>PF00917 MATH: MATH domain; InterPro: IPR002083 Although apparently functionally unrelated, intracellular TRAFs and extracellular meprins share a conserved region of about 180 residues, the meprin and TRAF homology (MATH) domain [] Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>KOG2714 consensus SETA binding protein SB1 and related proteins, contain BTB/POZ domain [General function prediction only] Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>KOG1724 consensus SCF ubiquitin ligase, Skp1 component [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00121 MATH MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-sandwich structure found in meprins, TRAFs and other proteins Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>PF13415 Kelch_3: Galactose oxidase, central domain Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>PF03931 Skp1_POZ: Skp1 family, tetramerisation domain; InterPro: IPR016073 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex [] Back     alignment and domain information
>cd03775 MATH_Ubp21p Ubiquitin-specific protease 21 (Ubp21p) family, MATH domain; composed of fungal proteins with similarity to Ubp21p of fission yeast Back     alignment and domain information
>PF13854 Kelch_5: Kelch motif Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>cd03773 MATH_TRIM37 Tripartite motif containing protein 37 (TRIM37) family, MATH domain; TRIM37 is a peroxisomal protein and is a member of the tripartite motif (TRIM) protein subfamily, also known as the RING-B-box-coiled-coil (RBCC) subfamily of zinc-finger proteins Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>PF01466 Skp1: Skp1 family, dimerisation domain; InterPro: IPR016072 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex [] Back     alignment and domain information
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>KOG2715 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>KOG0511 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>COG5201 SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PLN02772 guanylate kinase Back     alignment and domain information
>KOG1778 consensus CREB binding protein/P300 and related TAZ Zn-finger proteins [Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query413
3i3n_A279 Kelch-like protein 11; structural genomics, BTB, K 1e-28
3hve_A256 Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis 3e-27
2if5_A120 Zinc finger and BTB domain-containing protein 7A; 5e-14
1r29_A127 B-cell lymphoma 6 protein; BTB domain, transcripti 1e-12
3htm_A172 Speckle-type POZ protein; BTB, SPOP, ubiquitin, li 2e-12
2vkp_A109 BTB/POZ domain-containing protein 6; protein-bindi 2e-12
4eoz_A145 Speckle-type POZ protein; E3 ubiquitin ligase, nuc 7e-12
2ppi_A144 Gigaxonin; BTB domain, protein degradation, struct 7e-12
2vpk_A116 Myoneurin; transcription regulation, transcription 1e-11
3hqi_A312 Speckle-type POZ protein; SPOP, ubiquitin, puckere 2e-11
3ohu_A125 Transcription regulator protein BACH2; BTB/POZ dom 4e-11
2yy9_A135 Zinc finger and BTB domain-containing protein 48; 6e-11
3b84_A119 Zinc finger and BTB domain-containing protein 48; 1e-10
2ihc_A124 Transcription regulator protein BACH1; BRIC-A-BRAC 3e-10
1buo_A121 POZ domain, protein (promyelocytic leukemia zinc f 4e-10
2z8h_A138 Transcription regulator protein BACH1; BTB, POZ, d 5e-10
3ga1_A129 Nucleus accumbens-associated protein 1; BTB/POZ do 3e-09
3fkc_A116 Transcriptional regulator kaiso; zinc finger and B 5e-09
2q81_A119 MIZ-1 protein; BTB/POZ domain, transcription; HET: 1e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
3m5b_A119 Zinc finger and BTB domain-containing protein 32; 4e-07
2eqx_A105 Kelch repeat and BTB domain-containing protein 4; 8e-05
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} Length = 279 Back     alignment and structure
 Score =  112 bits (282), Expect = 1e-28
 Identities = 46/213 (21%), Positives = 85/213 (39%), Gaps = 23/213 (10%)

Query: 18  ILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEE----AALMELLNFMYSSTLSTTTPTA 73
           +LAA + +F  L S    ES    V +R  +SE       +  ++ +MY+  +  +T + 
Sbjct: 53  VLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVSTGSV 112

Query: 74  LLDVLMAADKFEVASCMRYCSR-LLRNL-PMTCESALLYLDLPSSVLMADA--VQPLTDT 129
             +VL  AD+F +     +C   L + L    C      + +     +A    +  L   
Sbjct: 113 -HEVLELADRFLLIRLKEFCGEFLKKKLHLSNC------VAI---HSLAHMYTLSQLALK 162

Query: 130 AKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLE 189
           A   +   +  + +  EE   LP   I   L+  ++ + SE+ +++  LKW +      E
Sbjct: 163 AADMIRRNFHKVIQ-DEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQ-R--NAE 218

Query: 190 ERREILGSRLGRLIRFPYMTCRKLKKVLTCNDF 222
           ER       L +L+R   M    L + +     
Sbjct: 219 ERERYF-EELFKLLRLSQMKPTYLTRHVKPERL 250
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B Length = 256 Back     alignment and structure
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A Length = 120 Back     alignment and structure
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A Length = 127 Back     alignment and structure
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens} Length = 172 Back     alignment and structure
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens} Length = 109 Back     alignment and structure
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens} Length = 145 Back     alignment and structure
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} Length = 144 Back     alignment and structure
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens} Length = 116 Back     alignment and structure
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A Length = 312 Back     alignment and structure
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} PDB: 3ohv_A Length = 125 Back     alignment and structure
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus} Length = 135 Back     alignment and structure
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens} Length = 119 Back     alignment and structure
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens} Length = 124 Back     alignment and structure
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A Length = 121 Back     alignment and structure
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus} Length = 138 Back     alignment and structure
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens} Length = 129 Back     alignment and structure
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A Length = 116 Back     alignment and structure
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A Length = 119 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} Length = 119 Back     alignment and structure
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 105 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query413
3i3n_A279 Kelch-like protein 11; structural genomics, BTB, K 100.0
3hve_A256 Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis 100.0
3htm_A172 Speckle-type POZ protein; BTB, SPOP, ubiquitin, li 99.94
3hqi_A312 Speckle-type POZ protein; SPOP, ubiquitin, puckere 99.92
4eoz_A145 Speckle-type POZ protein; E3 ubiquitin ligase, nuc 99.9
2vkp_A109 BTB/POZ domain-containing protein 6; protein-bindi 99.88
2if5_A120 Zinc finger and BTB domain-containing protein 7A; 99.87
1r29_A127 B-cell lymphoma 6 protein; BTB domain, transcripti 99.87
2z8h_A138 Transcription regulator protein BACH1; BTB, POZ, d 99.86
2ppi_A144 Gigaxonin; BTB domain, protein degradation, struct 99.86
3b84_A119 Zinc finger and BTB domain-containing protein 48; 99.86
2yy9_A135 Zinc finger and BTB domain-containing protein 48; 99.85
2vpk_A116 Myoneurin; transcription regulation, transcription 99.85
1buo_A121 POZ domain, protein (promyelocytic leukemia zinc f 99.84
3ohu_A125 Transcription regulator protein BACH2; BTB/POZ dom 99.84
2ihc_A124 Transcription regulator protein BACH1; BRIC-A-BRAC 99.83
2q81_A119 MIZ-1 protein; BTB/POZ domain, transcription; HET: 99.82
3m5b_A119 Zinc finger and BTB domain-containing protein 32; 99.81
3ga1_A129 Nucleus accumbens-associated protein 1; BTB/POZ do 99.81
3fkc_A116 Transcriptional regulator kaiso; zinc finger and B 99.77
2eqx_A105 Kelch repeat and BTB domain-containing protein 4; 99.76
2ast_A159 S-phase kinase-associated protein 1A; SCF-substrat 99.53
4ajy_C97 Transcription elongation factor B polypeptide 1; E 99.31
1fs1_B141 SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, le 99.11
2p1m_A160 SKP1-like protein 1A; F-BOX, leucine rich repeat, 99.08
1hv2_A99 Elongin C, ELC1; protein-peptide complex, signalin 98.5
2fnj_C96 Transcription elongation factor B polypeptide 1; b 98.42
3v7d_A169 Suppressor of kinetochore protein 1; WD 40 domain, 98.39
3drz_A107 BTB/POZ domain-containing protein KCTD5; potassium 98.28
1vcb_B112 Protein (elongin C); tumor suppressor, cancer, ubi 97.85
3ivv_A145 Speckle-type POZ protein; protein binding, nucleus 97.36
3drx_A202 BTB/POZ domain-containing protein KCTD5; golgi, gr 97.34
3ii7_A 306 Kelch-like protein 7; protein-binding, kelch-repea 97.3
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 97.26
2vpj_A 301 Kelch-like protein 12; adaptor protein, WNT signal 97.22
2zwa_A 695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 97.09
2xn4_A 302 Kelch-like protein 2; structural protein, cytoskel 97.03
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 97.02
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 96.91
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 96.87
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 96.84
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 96.81
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 96.61
3hqi_A 312 Speckle-type POZ protein; SPOP, ubiquitin, puckere 96.51
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 96.44
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 96.41
3kvt_A115 Potassium channel protein SHAW; tetramerization do 95.96
2foj_A155 Ubiquitin carboxyl-terminal hydrolase 7; MATH doma 95.92
1s1g_A124 Potassium voltage-gated channel subfamily D membe; 95.8
2uvk_A 357 YJHT; unknown function, hypothetical protein, sial 95.64
2uvk_A 357 YJHT; unknown function, hypothetical protein, sial 95.32
2nz0_B140 Potassium voltage-gated channel subfamily D membe; 95.16
1nn7_A105 Potassium channel KV4.2; teteramerization domain, 95.13
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 94.71
1k3i_A 656 Galactose oxidase precursor; blade beta propeller, 94.54
1t1d_A100 Protein (potassium channel KV1.1); potassium chann 94.46
1k3i_A656 Galactose oxidase precursor; blade beta propeller, 93.56
2f1z_A 522 Ubiquitin carboxyl-terminal hydrolase 7; hausp, US 91.72
4gjh_A178 TNF receptor-associated factor 5; TRAF domain, imm 91.42
1ca9_A192 TRAF2, protein (TNF receptor associated factor 2); 91.33
1d00_A168 Tumor necrosis factor receptor associated protein 89.1
1lb6_A160 TNF receptor-associated factor 6; TRAF6-CD40 compl 86.06
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A Back     alignment and structure
Probab=100.00  E-value=1.9e-45  Score=351.22  Aligned_cols=231  Identities=21%  Similarity=0.352  Sum_probs=210.0

Q ss_pred             CCcEEEEEe-----EEEeehhhhcccCHHHHHhhcCCCCCCCccEEEEec----CCCCHHHHHHHHHHHccCcccCCChh
Q 015106            2 DLSTVLRVK-----TVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRI----HASEEAALMELLNFMYSSTLSTTTPT   72 (413)
Q Consensus         2 ~cDV~l~v~-----~f~aHk~iLaa~S~yF~~mf~~~~~Es~~~~i~L~~----~~v~~~~f~~lL~fiYtg~i~i~~~~   72 (413)
                      +|||+|.|+     +|+|||.|||++|+||++||+++|+|+.+.+|+|+.    +++++++|+.+|+|+|||++.++. +
T Consensus        32 ~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~-~  110 (279)
T 3i3n_A           32 FCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVST-G  110 (279)
T ss_dssp             TCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHHHHHHHHHSEEEEET-T
T ss_pred             CCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCcccCH-H
Confidence            699999995     499999999999999999999999999999999862    278999999999999999999987 8


Q ss_pred             hHHHHHHHHhhhchhhHHHHHhHchhccCCChhhHHHHhhcccchHhhhccHHHHHHHHHHHHhhcccccccchhhcCCC
Q 015106           73 ALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLP  152 (413)
Q Consensus        73 ~v~~LL~aA~~lqv~~L~~~C~~~L~~~~l~~~n~l~i~~~a~~~~~~~~~~~L~~~a~~fI~~nf~~v~~~~~efl~L~  152 (413)
                      ++.+++.+|++|+++.|++.|++||.+ .++++||+.++.+|+    .+++.+|.+.|.+||.+||.++.+ +++|.+||
T Consensus       111 ~v~~ll~~A~~l~i~~L~~~c~~~L~~-~l~~~n~~~i~~~A~----~~~~~~L~~~~~~~i~~~f~~v~~-~~~f~~L~  184 (279)
T 3i3n_A          111 SVHEVLELADRFLLIRLKEFCGEFLKK-KLHLSNCVAIHSLAH----MYTLSQLALKAADMIRRNFHKVIQ-DEEFYTLP  184 (279)
T ss_dssp             THHHHHHHHHHTTCHHHHHHHHHHHHH-HCCTTTHHHHHHHHH----HTTCHHHHHHHHHHHHHTHHHHTT-SSGGGGSC
T ss_pred             HHHHHHHHHHHHCcHHHHHHHHHHHHH-cCCcchHHHHHHHHH----HcCcHHHHHHHHHHHHHHHHHHhc-CcChhcCC
Confidence            999999999999999999999999999 899999999999986    569999999999999999999999 99999999


Q ss_pred             HHHHHHhhcCCCCCCCChHHHHHHHHHHHHhcCCChHHHHHHHHHHhhccccCCCCCHHHHHhhccCCCCC--chHHHHH
Q 015106          153 LAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFD--PELASKV  230 (413)
Q Consensus       153 ~~~l~~lL~sd~L~v~sE~~v~~av~~Wi~~~~~~~~~R~~~l~~~Ll~~VRf~lls~~~L~~~~~~~~~~--~~~~~~l  230 (413)
                      .+.+..+|++|+|+|.+|.+||+++++|++++   +++|.+++ ++|+++||||+|++.+|.+.+.+++++  .+.|+++
T Consensus       185 ~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~---~~~r~~~~-~~ll~~VRf~l~~~~~L~~~v~~~~l~~~~~~c~~~  260 (279)
T 3i3n_A          185 FHLIRDWLSDLEITVDSEEVLFETVLKWVQRN---AEERERYF-EELFKLLRLSQMKPTYLTRHVKPERLVANNEVCVKL  260 (279)
T ss_dssp             HHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTT---HHHHTTTH-HHHHTTSCGGGSCHHHHHHTTTTSHHHHTCHHHHHH
T ss_pred             HHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcC---HHHHHHHH-HHHHHhcCCCCCCHHHHHHHhhccchhcCCHHHHHH
Confidence            99999999999999999999999999999998   88999998 899999999999999999999888775  3789999


Q ss_pred             HHHHHHhhcCCcc
Q 015106          231 VLESLFFKAETPY  243 (413)
Q Consensus       231 v~ea~~~~~~~~~  243 (413)
                      +.+|+.||..|.+
T Consensus       261 l~ea~~~~~~~~e  273 (279)
T 3i3n_A          261 VADAVERHALRAE  273 (279)
T ss_dssp             HHHHHHHHHHTTC
T ss_pred             HHHHHHhccCchh
Confidence            9999999987644
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B Back     alignment and structure
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens} Back     alignment and structure
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A Back     alignment and structure
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens} Back     alignment and structure
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens} Back     alignment and structure
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A Back     alignment and structure
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A Back     alignment and structure
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus} Back     alignment and structure
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} Back     alignment and structure
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens} Back     alignment and structure
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus} Back     alignment and structure
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens} Back     alignment and structure
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A Back     alignment and structure
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A Back     alignment and structure
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens} Back     alignment and structure
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A Back     alignment and structure
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0 Back     alignment and structure
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens} Back     alignment and structure
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A Back     alignment and structure
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E* Back     alignment and structure
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D Back     alignment and structure
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A* Back     alignment and structure
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1 Back     alignment and structure
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B Back     alignment and structure
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A* Back     alignment and structure
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens} Back     alignment and structure
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1 Back     alignment and structure
>3ivv_A Speckle-type POZ protein; protein binding, nucleus, UBL conjugation pathway, ligase; 1.25A {Homo sapiens} SCOP: b.8.1.1 PDB: 3ivq_A 3ivb_A 3hsv_A 3hqh_A 3hqm_A 3hql_A 2cr2_A Back     alignment and structure
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2 Back     alignment and structure
>2foj_A Ubiquitin carboxyl-terminal hydrolase 7; MATH domain, hydrolase; 1.60A {Homo sapiens} PDB: 1yze_A 1yy6_A 2foo_A 2fop_A 3mqr_A 3mqs_C 2f1w_A 2f1x_A 2f1y_A 2xxn_A Back     alignment and structure
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2 Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A Back     alignment and structure
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2 Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens} Back     alignment and structure
>4gjh_A TNF receptor-associated factor 5; TRAF domain, immune system; 2.81A {Mus musculus} Back     alignment and structure
>1ca9_A TRAF2, protein (TNF receptor associated factor 2); TNF signaling, TRAF, adapter protein, cell surviVal; 2.30A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1qsc_A 1czz_A Back     alignment and structure
>1d00_A Tumor necrosis factor receptor associated protein 2; B-sandwich, protein-peptide complex, apoptosis; 2.00A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1ca4_A 1d0j_A 1f3v_B 1czy_A 1d01_A 1d0a_A Back     alignment and structure
>1lb6_A TNF receptor-associated factor 6; TRAF6-CD40 complex, signaling protein; 1.80A {Homo sapiens} SCOP: b.8.1.1 PDB: 1lb5_A 1lb4_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 413
d1r29a_122 d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB 3e-06
d1buoa_121 d.42.1.1 (A:) Promyelocytic leukaemia zinc finger 1e-04
>d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Length = 122 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: B-cell lymphoma 6 (Bcl6) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (103), Expect = 3e-06
 Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 5/95 (5%)

Query: 6   VLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYS 63
           V+ V  +       +L A S  FY +F++ ++ +                   LL+FMY+
Sbjct: 29  VIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINL--DPEINPEGFNILLDFMYT 86

Query: 64  STLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 98
           S L       ++ V+  A   ++   +  C + ++
Sbjct: 87  SRL-NLREGNIMAVMATAMYLQMEHVVDTCRKFIK 120
>d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Length = 121 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query413
d1r29a_122 B-cell lymphoma 6 (Bcl6) protein BTB domain {Human 99.87
d1buoa_121 Promyelocytic leukaemia zinc finger (PLZF) protein 99.86
d2c9wc196 Elongin C {Human (Homo sapiens) [TaxId: 9606]} 97.56
d1hv2a_99 Elongin C {Baker's yeast (Saccharomyces cerevisiae 97.56
d1nn7a_105 Potassium channel kv4.2 {Rat (Rattus norvegicus) [ 97.03
d1zgka1 288 Kelch-like ECH-associated protein 1, KEAP1 {Human 97.03
d3kvta_103 akv3.1 voltage-gated potassium channel {California 97.02
d2cr2a1146 Speckle-type poz protein SPOP {Human (Homo sapiens 96.91
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 96.41
d1k3ia3387 Galactose oxidase, central domain {Fungi (Fusarium 96.37
d1t1da_100 Shaker potassium channel {California sea hare (Apl 96.35
d1k3ia3 387 Galactose oxidase, central domain {Fungi (Fusarium 94.14
d1fs1b155 Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sa 92.63
d1nexa170 Centromere DNA-binding protein complex Cbf3 subuni 91.19
d1lb6a_155 TNF receptor associated factor 6 (TRAF6) {Human (H 86.5
d1fs1b261 Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sa 84.22
d1nexa272 Centromere DNA-binding protein complex Cbf3 subuni 82.44
>d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: B-cell lymphoma 6 (Bcl6) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.4e-22  Score=166.87  Aligned_cols=95  Identities=19%  Similarity=0.346  Sum_probs=89.0

Q ss_pred             CCcEEEEE--eEEEeehhhhcccCHHHHHhhcCCCCCCCccEEEEecCCCCHHHHHHHHHHHccCcccCCChhhHHHHHH
Q 015106            2 DLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLM   79 (413)
Q Consensus         2 ~cDV~l~v--~~f~aHk~iLaa~S~yF~~mf~~~~~Es~~~~i~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~LL~   79 (413)
                      +|||+|.+  ++|+|||+||+++|+||++||.+++.|+.+..+.++  ++++++|+.+|+|+|||++.++. +++.+++.
T Consensus        25 ~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~~~e~~~~~~~~~--~v~~~~f~~ll~~~Ytg~~~i~~-~~v~~ll~  101 (122)
T d1r29a_          25 LTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDP--EINPEGFNILLDFMYTSRLNLRE-GNIMAVMA  101 (122)
T ss_dssp             SCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTTTCSEEECCT--TSCHHHHHHHHHHHHHSCCCCCT-TTHHHHHH
T ss_pred             CeEEEEEECCEEEEEehHHhhhCCHHHHHHhccchhhhcceeeeec--ccCHHHHHHHHhhhcCCeecCch-hhHHHHHH
Confidence            69999999  579999999999999999999999999877666655  89999999999999999999988 89999999


Q ss_pred             HHhhhchhhHHHHHhHchhc
Q 015106           80 AADKFEVASCMRYCSRLLRN   99 (413)
Q Consensus        80 aA~~lqv~~L~~~C~~~L~~   99 (413)
                      +|++|+++.|++.|.+||++
T Consensus       102 ~A~~l~i~~L~~~C~~~L~~  121 (122)
T d1r29a_         102 TAMYLQMEHVVDTCRKFIKA  121 (122)
T ss_dssp             HHHHTTCHHHHHHHHHHHHT
T ss_pred             HHHHHCcHHHHHHHHHHHHh
Confidence            99999999999999999976
>d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2c9wc1 d.42.1.1 (C:17-112) Elongin C {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hv2a_ d.42.1.1 (A:) Elongin C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]} Back     information, alignment and structure
>d2cr2a1 b.8.1.1 (A:8-153) Speckle-type poz protein SPOP {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]} Back     information, alignment and structure
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d1fs1b1 a.157.1.1 (B:86-140) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nexa1 a.157.1.1 (A:116-185) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1lb6a_ b.8.1.1 (A:) TNF receptor associated factor 6 (TRAF6) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fs1b2 d.42.1.1 (B:2-68) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nexa2 d.42.1.1 (A:4-103) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure