Citrus Sinensis ID: 015249
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 410 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SAK4 | 528 | Succinate-semialdehyde de | yes | no | 0.924 | 0.717 | 0.836 | 0.0 | |
| B9F3B6 | 527 | Succinate-semialdehyde de | yes | no | 0.960 | 0.747 | 0.792 | 1e-179 | |
| P25526 | 482 | Succinate-semialdehyde de | N/A | no | 0.912 | 0.775 | 0.598 | 1e-135 | |
| P51650 | 523 | Succinate-semialdehyde de | yes | no | 0.951 | 0.745 | 0.595 | 1e-131 | |
| Q3MSM3 | 535 | Succinate-semialdehyde de | N/A | no | 0.951 | 0.728 | 0.608 | 1e-129 | |
| P51649 | 535 | Succinate-semialdehyde de | yes | no | 0.951 | 0.728 | 0.605 | 1e-129 | |
| Q6A2H2 | 535 | Succinate-semialdehyde de | N/A | no | 0.951 | 0.728 | 0.603 | 1e-129 | |
| Q3MSM4 | 535 | Succinate-semialdehyde de | N/A | no | 0.951 | 0.728 | 0.605 | 1e-129 | |
| Q6A2H1 | 535 | Succinate-semialdehyde de | N/A | no | 0.951 | 0.728 | 0.605 | 1e-129 | |
| Q8BWF0 | 523 | Succinate-semialdehyde de | yes | no | 0.951 | 0.745 | 0.587 | 1e-129 |
| >sp|Q9SAK4|SSDH_ARATH Succinate-semialdehyde dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=ALDH5F1 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 635 bits (1639), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/379 (83%), Positives = 350/379 (92%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV YGA FIE+YAEEAKRVYG+IIP L DRRL VLKQPVGV GAITPWNFPLAMITRKV
Sbjct: 150 EVAYGASFIEYYAEEAKRVYGDIIPPNLSDRRLLVLKQPVGVVGAITPWNFPLAMITRKV 209
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALA GCTVVVKPSE TPLTALAAAELALQAG+PPG +NVVMGNAP+IGDALLTSPQVR
Sbjct: 210 GPALASGCTVVVKPSELTPLTALAAAELALQAGVPPGALNVVMGNAPEIGDALLTSPQVR 269
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
KITFTGSTAVGKKLMA AA TVKKVSLELGGNAP IVFDDADL+VAV G LAAKFRNSGQ
Sbjct: 270 KITFTGSTAVGKKLMAAAAPTVKKVSLELGGNAPSIVFDDADLDVAVKGTLAAKFRNSGQ 329
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANRVLVQ+GIY+KFA+AFS+AV+ L+VGDGF +G QGPLIN AA++KVETFV+DA
Sbjct: 330 TCVCANRVLVQDGIYDKFAEAFSEAVQKLEVGDGFRDGTTQGPLINDAAVQKVETFVQDA 389
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
VSKGAK+++GG+RHSLGMTFYEPTV+ +V M++S+EE+FGPVAPL+ FKTEE+AI +A
Sbjct: 390 VSKGAKIIIGGKRHSLGMTFYEPTVIRDVSDNMIMSKEEIFGPVAPLIRFKTEEDAIRIA 449
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDT AGLAAYIFTN++QR+WRV EALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY
Sbjct: 450 NDTIAGLAAYIFTNSVQRSWRVFEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 509
Query: 392 GMDEFLEIKYVCLGDMNRK 410
GMDE+LEIKYVCLGDMNR
Sbjct: 510 GMDEYLEIKYVCLGDMNRH 528
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Oxidizes specifically succinate semialdehyde. Involved in plant response to environmental stress by preventing the accumulation of reactive oxygen species. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 4 |
| >sp|B9F3B6|SSDH_ORYSJ Succinate-semialdehyde dehydrogenase, mitochondrial OS=Oryza sativa subsp. japonica GN=ALDH5F1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 626 bits (1615), Expect = e-179, Method: Compositional matrix adjust.
Identities = 313/395 (79%), Positives = 354/395 (89%), Gaps = 1/395 (0%)
Query: 15 LRLLMRLILGAS-SLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 73
L LLM L G L EV YGA FIE++AEEAKR+YG+IIP TL DRRL VLKQPVGV
Sbjct: 133 LALLMTLEQGKPMKEALVEVTYGASFIEYFAEEAKRIYGDIIPPTLSDRRLLVLKQPVGV 192
Query: 74 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 133
GA+TPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA+LALQAGIP G +NVV
Sbjct: 193 VGAVTPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAADLALQAGIPAGAINVV 252
Query: 134 MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD 193
MGNAP+IGDALL S QVRKITFTGSTAVGKKLMAG+A TVKKVSLELGGNAPCIVFDDAD
Sbjct: 253 MGNAPEIGDALLQSTQVRKITFTGSTAVGKKLMAGSANTVKKVSLELGGNAPCIVFDDAD 312
Query: 194 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 253
++VA+ G+LAAKFRNSGQTCVCANR+LVQEGIYEKFA AF KAV++LKVG+G E QG
Sbjct: 313 IDVAIKGSLAAKFRNSGQTCVCANRILVQEGIYEKFASAFIKAVQSLKVGNGLEESTSQG 372
Query: 254 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFG 313
PLIN+AA++KVE F+ DA SKGA ++LGG+RHSLGM+FYEPTV+ NV ++ML+ REEVFG
Sbjct: 373 PLINEAAVQKVEKFINDATSKGANIMLGGKRHSLGMSFYEPTVVGNVSNDMLLFREEVFG 432
Query: 314 PVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV 373
PVAPL+ FKTEE+AI MANDTNAGLAAYIFT ++ R+WRVSEALEYGLVGVNEG+ISTEV
Sbjct: 433 PVAPLVPFKTEEDAIRMANDTNAGLAAYIFTKSIPRSWRVSEALEYGLVGVNEGIISTEV 492
Query: 374 APFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 408
APFGGVKQSGLGREGSKYGMDE+LE+KY+C+G++N
Sbjct: 493 APFGGVKQSGLGREGSKYGMDEYLELKYICMGNLN 527
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Oxidizes specifically succinate semialdehyde. Involved in plant response to environmental stress by preventing the accumulation of reactive oxygen species. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|P25526|GABD_ECOLI Succinate-semialdehyde dehydrogenase [NADP(+)] GabD OS=Escherichia coli (strain K12) GN=gabD PE=1 SV=1 | Back alignment and function description |
|---|
Score = 481 bits (1239), Expect = e-135, Method: Compositional matrix adjust.
Identities = 224/374 (59%), Positives = 290/374 (77%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ Y A FIE++AEE KR+YG+ IP D+RL V+KQP+GV AITPWNFP AMITRK
Sbjct: 108 EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKA 167
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALA GCT+V+KP+ TP +ALA AELA++AG+P GV NVV G+A +G+ L ++P VR
Sbjct: 168 GPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVR 227
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
K++FTGST +G++LM A +KKVSLELGGNAP IVFDDADL+ AV GALA+KFRN+GQ
Sbjct: 228 KLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQ 287
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANR+ VQ+G+Y++FA+ +AV L +GDG GV GPLI++ A+ KVE + DA
Sbjct: 288 TCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADA 347
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
+ KGA+V+ GG+ H G F++PT+L +V + VS+EE FGP+APL FK E + I A
Sbjct: 348 LEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQA 407
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDT GLAAY + +L R +RV EALEYG+VG+N G+IS EVAPFGG+K SGLGREGSKY
Sbjct: 408 NDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKY 467
Query: 392 GMDEFLEIKYVCLG 405
G++++LEIKY+C+G
Sbjct: 468 GIEDYLEIKYMCIG 481
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Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. It appears to be important for nitrogen metabolism under N limitation conditions. Escherichia coli (strain K12) (taxid: 83333) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 9 |
| >sp|P51650|SSDH_RAT Succinate-semialdehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh5a1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 468 bits (1204), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/398 (59%), Positives = 299/398 (75%), Gaps = 8/398 (2%)
Query: 18 LMRLILGASSLLLREVD----YGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 73
L ++I S L+E Y A F+E+++EEA+RVYG+II + D+R VLKQPVGV
Sbjct: 126 LAKIITAESGKPLKEAQGEILYSAFFLEWFSEEARRVYGDIIYTSAKDKRGLVLKQPVGV 185
Query: 74 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 133
A ITPWNFP AMITRKVG ALA GCTVVVKP+E TP +ALA A+LA QAGIPPGV NV+
Sbjct: 186 ASIITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPYSALALAQLANQAGIPPGVYNVI 245
Query: 134 ---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 190
A ++G+ L T P V KI+FTGSTA GK L+ AA +VK+VS+ELGG AP IVFD
Sbjct: 246 PCSRTKAKEVGEVLCTDPLVSKISFTGSTATGKILLHHAANSVKRVSMELGGLAPFIVFD 305
Query: 191 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVK-NLKVGDGFGEG 249
A+++ AV GA+A+KFRN+GQTCVC+NR LVQ GI++ F F++A+K +L+VG+GF EG
Sbjct: 306 SANVDQAVAGAMASKFRNAGQTCVCSNRFLVQRGIHDSFVTKFAEAMKKSLRVGNGFEEG 365
Query: 250 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSRE 309
QGPLIN+ A+EKVE V DAV+KGA V+ GG+RH G F+EPT+LSNV +ML E
Sbjct: 366 TTQGPLINEKAVEKVEKHVNDAVAKGATVVTGGKRHQSGGNFFEPTLLSNVTRDMLCITE 425
Query: 310 EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI 369
E FGPVAP++ F EEEA+ +AN + GLA Y ++ + + WRV+E LE G+VGVNEGLI
Sbjct: 426 ETFGPVAPVIKFDKEEEAVAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLI 485
Query: 370 STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 407
S+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G +
Sbjct: 486 SSVECPFGGVKQSGLGREGSKYGIDEYLEVKYVCYGGL 523
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Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q3MSM3|SSDH_HYLLA Succinate-semialdehyde dehydrogenase, mitochondrial OS=Hylobates lar GN=ALDH5A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 462 bits (1190), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/398 (60%), Positives = 300/398 (75%), Gaps = 8/398 (2%)
Query: 18 LMRLILGASSLLLREVD----YGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 73
L R+I S L+E Y A F+E+++EEA+RVYG+II DRR VLKQP+GV
Sbjct: 138 LARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIYTPAKDRRALVLKQPIGV 197
Query: 74 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 133
A ITPWNFP AMITRKVG ALA GCTVVVKP+E TP +ALA AELA QAGIP GV NV+
Sbjct: 198 AAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVI 257
Query: 134 ---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 190
NA ++G+A+ T P V KI+FTGST GK L+ AA +VK+VS+ELGG AP IVFD
Sbjct: 258 PCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFD 317
Query: 191 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVK-NLKVGDGFGEG 249
A+++ AV GALA+KFRN+GQTCVC+NR LVQ GI++ F AF++A+K NL VG+GF EG
Sbjct: 318 SANVDQAVAGALASKFRNTGQTCVCSNRFLVQRGIHDAFVKAFAEAMKKNLHVGNGFEEG 377
Query: 250 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSRE 309
QGPLIN+ A+EKVE V DAVSKGA ++ GG+RH LG F+EPT+L NV +ML + E
Sbjct: 378 TTQGPLINEKAVEKVEKQVNDAVSKGATIVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHE 437
Query: 310 EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI 369
E FGP+AP++ F TEEEAI +AN + GLA Y ++ + + WRV+E LE G+VGVNEGLI
Sbjct: 438 ETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLI 497
Query: 370 STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 407
S+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G +
Sbjct: 498 SSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
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Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Hylobates lar (taxid: 9580) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|P51649|SSDH_HUMAN Succinate-semialdehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH5A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 462 bits (1189), Expect = e-129, Method: Compositional matrix adjust.
Identities = 241/398 (60%), Positives = 301/398 (75%), Gaps = 8/398 (2%)
Query: 18 LMRLILGASSLLLREVD----YGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 73
L R+I S L+E Y A F+E+++EEA+RVYG+II DRR VLKQP+GV
Sbjct: 138 LARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGV 197
Query: 74 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 133
A ITPWNFP AMITRKVG ALA GCTVVVKP+E TP +ALA AELA QAGIP GV NV+
Sbjct: 198 AAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVI 257
Query: 134 ---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 190
NA ++G+A+ T P V KI+FTGST GK L+ AA +VK+VS+ELGG AP IVFD
Sbjct: 258 PCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFD 317
Query: 191 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVK-NLKVGDGFGEG 249
A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ GI++ F AF++A+K NL+VG+GF EG
Sbjct: 318 SANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEG 377
Query: 250 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSRE 309
QGPLIN+ A+EKVE V DAVSKGA V+ GG+RH LG F+EPT+L NV +ML + E
Sbjct: 378 TTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHE 437
Query: 310 EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI 369
E FGP+AP++ F TEEEAI +AN + GLA Y ++ + + WRV+E LE G+VGVNEGLI
Sbjct: 438 ETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLI 497
Query: 370 STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 407
S+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G +
Sbjct: 498 SSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
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Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q6A2H2|SSDH_PONPY Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pongo pygmaeus GN=ALDH5A1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 461 bits (1187), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/398 (60%), Positives = 301/398 (75%), Gaps = 8/398 (2%)
Query: 18 LMRLILGASSLLLREVD----YGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 73
L R+I S L+E Y A F+E+++EEA+RVYG+II DRR VLKQP+GV
Sbjct: 138 LARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIYTPAKDRRALVLKQPIGV 197
Query: 74 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 133
A ITPWNFP AMITRKVG ALA GCTVVVKP+E TP +ALA AELA QAGIP GV NV+
Sbjct: 198 AAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVI 257
Query: 134 ---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 190
NA ++G+A+ T P V KI+FTGST GK L+ AA +VK+VS+ELGG AP IVFD
Sbjct: 258 PCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFD 317
Query: 191 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVK-NLKVGDGFGEG 249
A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ GI++ F AF++A+K NL+VG+GF EG
Sbjct: 318 SANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEG 377
Query: 250 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSRE 309
QGPLIN+ A+EKVE V DAVSKGA ++ GG+RH LG F+EPT+L NV +ML + E
Sbjct: 378 TTQGPLINEKAVEKVEKQVNDAVSKGATIVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHE 437
Query: 310 EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI 369
E FGP+AP++ F TEEEAI +AN + GLA Y ++ + + WRV+E LE G+VGVNEGLI
Sbjct: 438 ETFGPLAPVIKFNTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLI 497
Query: 370 STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 407
S+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G +
Sbjct: 498 SSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Pongo pygmaeus (taxid: 9600) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q3MSM4|SSDH_PANPA Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pan paniscus GN=ALDH5A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 461 bits (1186), Expect = e-129, Method: Compositional matrix adjust.
Identities = 241/398 (60%), Positives = 301/398 (75%), Gaps = 8/398 (2%)
Query: 18 LMRLILGASSLLLREVD----YGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 73
L R+I S L+E Y A F+E+++EEA+RVYG+II DRR VLKQP+GV
Sbjct: 138 LARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIYTPAKDRRALVLKQPIGV 197
Query: 74 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 133
A ITPWNFP AMITRKVG ALA GCTVVVKP+E TP +ALA AELA QAGIP GV NV+
Sbjct: 198 AAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVI 257
Query: 134 ---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 190
NA ++G+A+ T P V KI+FTGST GK L+ AA +VK+VS+ELGG AP IVFD
Sbjct: 258 PCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFD 317
Query: 191 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVK-NLKVGDGFGEG 249
A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ GI++ F AF++A+K NL+VG+GF EG
Sbjct: 318 SANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEG 377
Query: 250 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSRE 309
QGPLIN+ A+EKVE V DAVSKGA V+ GG+RH LG F+EPT+L NV +ML + E
Sbjct: 378 TTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHE 437
Query: 310 EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI 369
E FGP+AP++ F TEEEAI +AN + GLA Y ++ + + WRV+E LE G+VGVNEGLI
Sbjct: 438 ETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLI 497
Query: 370 STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 407
S+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G +
Sbjct: 498 SSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Pan paniscus (taxid: 9597) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q6A2H1|SSDH_GORGO Succinate-semialdehyde dehydrogenase, mitochondrial OS=Gorilla gorilla gorilla GN=ALDH5A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 461 bits (1186), Expect = e-129, Method: Compositional matrix adjust.
Identities = 241/398 (60%), Positives = 301/398 (75%), Gaps = 8/398 (2%)
Query: 18 LMRLILGASSLLLREVD----YGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 73
L R+I S L+E Y A F+E+++EEA+RVYG+II DRR VLKQP+GV
Sbjct: 138 LARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIYTPAKDRRALVLKQPIGV 197
Query: 74 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 133
A ITPWNFP AMITRKVG ALA GCTVVVKP+E TP +ALA AELA QAGIP GV NV+
Sbjct: 198 AAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVI 257
Query: 134 ---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 190
NA ++G+A+ T P V KI+FTGST GK L+ AA +VK+VS+ELGG AP IVFD
Sbjct: 258 PCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFD 317
Query: 191 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVK-NLKVGDGFGEG 249
A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ GI++ F AF++A+K NL+VG+GF EG
Sbjct: 318 SANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEG 377
Query: 250 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSRE 309
QGPLIN+ A+EKVE V DAVSKGA V+ GG+RH LG F+EPT+L NV +ML + E
Sbjct: 378 TTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHE 437
Query: 310 EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI 369
E FGP+AP++ F TEEEAI +AN + GLA Y ++ + + WRV+E LE G+VGVNEGLI
Sbjct: 438 ETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLI 497
Query: 370 STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 407
S+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G +
Sbjct: 498 SSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Gorilla gorilla gorilla (taxid: 9595) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q8BWF0|SSDH_MOUSE Succinate-semialdehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh5a1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 461 bits (1185), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/398 (58%), Positives = 297/398 (74%), Gaps = 8/398 (2%)
Query: 18 LMRLILGASSLLLREVD----YGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 73
L ++I S L+E Y A F+E+++EEA+R+YG+II + D+R VLKQPVGV
Sbjct: 126 LAKIITAESGKPLKEAQGEILYSALFLEWFSEEARRIYGDIIYTSAKDKRGLVLKQPVGV 185
Query: 74 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 133
A ITPWNFP AMITRKVG ALA GCTVVVKP+E TP +ALA A+LA QAGIP GV NV+
Sbjct: 186 AAIITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPYSALALAQLANQAGIPAGVYNVI 245
Query: 134 ---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 190
A ++G+ L T P V KI+FTGSTA GK L+ AA +VK+VS+ELGG AP IVFD
Sbjct: 246 PCSRNKAKEVGEVLCTDPLVSKISFTGSTATGKILLHHAANSVKRVSMELGGLAPFIVFD 305
Query: 191 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVK-NLKVGDGFGEG 249
A+++ AV GA+A+KFRN+GQTCVC+NR LVQ GI++ F F++A+K +L+VG+GF EG
Sbjct: 306 SANVDQAVAGAMASKFRNAGQTCVCSNRFLVQRGIHDSFVTKFAEAMKKSLRVGNGFEEG 365
Query: 250 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSRE 309
QGPLIN+ A+EKVE V DAV+KGA V+ GG+RH G F+EPT+LSNV +ML E
Sbjct: 366 TTQGPLINEKAVEKVEKQVNDAVAKGATVVTGGKRHQSGGNFFEPTLLSNVTRDMLCITE 425
Query: 310 EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI 369
E FGP+AP++ F EEEA+ +AN GLA Y ++ + + WRV+E LE G+VGVNEGLI
Sbjct: 426 ETFGPLAPVIKFDKEEEAVAIANAAEVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLI 485
Query: 370 STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 407
S+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G +
Sbjct: 486 SSVECPFGGVKQSGLGREGSKYGIDEYLEVKYVCYGGL 523
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 410 | ||||||
| 449444298 | 541 | PREDICTED: succinate-semialdehyde dehydr | 0.929 | 0.704 | 0.829 | 0.0 | |
| 356555230 | 537 | PREDICTED: succinate-semialdehyde dehydr | 0.921 | 0.703 | 0.830 | 0.0 | |
| 350538647 | 522 | succinic semialdehyde dehydrogenase [Sol | 0.919 | 0.722 | 0.832 | 0.0 | |
| 356528645 | 537 | PREDICTED: succinate-semialdehyde dehydr | 0.924 | 0.705 | 0.823 | 0.0 | |
| 224109088 | 536 | predicted protein [Populus trichocarpa] | 0.924 | 0.707 | 0.865 | 0.0 | |
| 255577875 | 607 | succinate semialdehyde dehydrogenase, pu | 0.904 | 0.611 | 0.865 | 0.0 | |
| 15219379 | 528 | succinate-semialdehyde dehydrogenase [Ar | 0.924 | 0.717 | 0.836 | 1e-180 | |
| 4835765 | 509 | Is a member of the PF|00171 aldehyde deh | 0.924 | 0.744 | 0.836 | 1e-179 | |
| 225462297 | 530 | PREDICTED: succinate-semialdehyde dehydr | 0.919 | 0.711 | 0.835 | 1e-178 | |
| 297736107 | 525 | unnamed protein product [Vitis vinifera] | 0.919 | 0.718 | 0.835 | 1e-178 |
| >gi|449444298|ref|XP_004139912.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/381 (82%), Positives = 358/381 (93%)
Query: 30 LREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 89
L E +YGA FIEF++EEAKRVYG+II T+ DRRL VLKQPVGV G ITPWNFPLAMITR
Sbjct: 161 LGETNYGASFIEFFSEEAKRVYGDIISPTIADRRLLVLKQPVGVVGIITPWNFPLAMITR 220
Query: 90 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQ 149
KVGPALA GCTVV+KPSE TPLTALAAAEL+LQAGIPPGVVNVVMG+AP IGDA+L S Q
Sbjct: 221 KVGPALASGCTVVIKPSELTPLTALAAAELSLQAGIPPGVVNVVMGDAPAIGDAILASSQ 280
Query: 150 VRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS 209
VRKITFTGSTAVGKKLMAGAAGTVK+VS ELGGNAPCI+FDDAD++VAV G++AAKFRNS
Sbjct: 281 VRKITFTGSTAVGKKLMAGAAGTVKRVSFELGGNAPCIIFDDADVDVAVKGSIAAKFRNS 340
Query: 210 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 269
GQTCVCANR+LVQEGIYEKF +AFSKAV+NL+VGDGFGEGV QGPLIN+AA++KVE F++
Sbjct: 341 GQTCVCANRILVQEGIYEKFTNAFSKAVQNLQVGDGFGEGVAQGPLINEAAVQKVEKFLQ 400
Query: 270 DAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 329
DA +KGAKVLLGG+RHSLGMTF+EPTV++ VKS+ML+SREEVFGPVAPLL F+TEEEAI
Sbjct: 401 DATTKGAKVLLGGKRHSLGMTFFEPTVVAGVKSDMLLSREEVFGPVAPLLPFRTEEEAIA 460
Query: 330 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGS 389
+ANDTNAGLAAYIFTNN+QR+WRV+EALEYG+VGVNEGLISTEVAPFGGVKQSGLGREGS
Sbjct: 461 LANDTNAGLAAYIFTNNIQRSWRVTEALEYGMVGVNEGLISTEVAPFGGVKQSGLGREGS 520
Query: 390 KYGMDEFLEIKYVCLGDMNRK 410
KYGMDE+LE+KYVCLG+M+R+
Sbjct: 521 KYGMDEYLELKYVCLGNMDRQ 541
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356555230|ref|XP_003545937.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/378 (83%), Positives = 351/378 (92%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E++YGA FIEF AEEAKR+YG+IIPA L DRRLFVLKQPVGV GAITPWNFPLAMITRKV
Sbjct: 159 EINYGAGFIEFAAEEAKRIYGDIIPAPLSDRRLFVLKQPVGVVGAITPWNFPLAMITRKV 218
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALACGCTVV+KPSE TPLTALAAAEL++QAGIPPGVVNVVMGNAPDIGDALL SPQVR
Sbjct: 219 GPALACGCTVVIKPSELTPLTALAAAELSIQAGIPPGVVNVVMGNAPDIGDALLASPQVR 278
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
KITFTGSTAVGKKLMAG+A TVKKVSLELGGNAPCIVFDDADL+VAV G LAAKFRNSGQ
Sbjct: 279 KITFTGSTAVGKKLMAGSAETVKKVSLELGGNAPCIVFDDADLDVAVKGTLAAKFRNSGQ 338
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANR++VQEGIYEKFA+A V+N+KVGDGF EGV QGPLIN+AA++KVE+ + DA
Sbjct: 339 TCVCANRIIVQEGIYEKFANALRDTVQNMKVGDGFSEGVAQGPLINEAAVKKVESLIHDA 398
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
SKGAKV+LGG+RHSLG TFYEPTV+S+V S+M +SREE FGPVAPLL FKTEE+AI +A
Sbjct: 399 TSKGAKVILGGKRHSLGFTFYEPTVISDVNSDMRISREEAFGPVAPLLRFKTEEDAIRIA 458
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDTNAGL +YIFTN++QR+WRV+EALEYGLVGVNEG+ISTEVAPFGG KQSGLGREGSKY
Sbjct: 459 NDTNAGLGSYIFTNSIQRSWRVAEALEYGLVGVNEGVISTEVAPFGGFKQSGLGREGSKY 518
Query: 392 GMDEFLEIKYVCLGDMNR 409
GMDE+LEIKYVCLG+M++
Sbjct: 519 GMDEYLEIKYVCLGNMHK 536
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|350538647|ref|NP_001233841.1| succinic semialdehyde dehydrogenase [Solanum lycopersicum] gi|171854593|dbj|BAG16487.1| succinic semialdehyde dehydrogenase [Solanum lycopersicum] | Back alignment and taxonomy information |
|---|
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/377 (83%), Positives = 351/377 (93%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV YGA FIEF AEE KR+YG+IIP+ L DRRLFVLKQPVGV GAITPWNFPLAMITRKV
Sbjct: 146 EVSYGAGFIEFSAEEGKRIYGDIIPSPLADRRLFVLKQPVGVVGAITPWNFPLAMITRKV 205
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALACGCTVV+KPSE TPLTALAAAEL++QAGIPPGVVNVVMGNAPDIGDALL SPQVR
Sbjct: 206 GPALACGCTVVIKPSELTPLTALAAAELSIQAGIPPGVVNVVMGNAPDIGDALLASPQVR 265
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
KITFTGST VGKKLM GAA TVKKVSLELGGNAPCI+FDDADL VA+ GALA KFRN+GQ
Sbjct: 266 KITFTGSTKVGKKLMEGAAATVKKVSLELGGNAPCIIFDDADLEVALKGALATKFRNTGQ 325
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANR+LVQEGIY+KFA+AF+KAV+N+KVGDGF EGV QGPLIN+AA++KVE FV++A
Sbjct: 326 TCVCANRILVQEGIYDKFANAFAKAVQNMKVGDGFTEGVEQGPLINEAAVQKVEYFVDEA 385
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
SKGAKVL+GG+RHSLGMTFYEPTV++ V SEML+++EEVFGPVAPLL FKT+EEAI MA
Sbjct: 386 TSKGAKVLVGGKRHSLGMTFYEPTVVTGVNSEMLLAKEEVFGPVAPLLKFKTDEEAIQMA 445
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDTNAGLAAYIF+ N++R WRV+EALEYG+VGVNEGL+STEVAPFGGVKQSGLGREGSKY
Sbjct: 446 NDTNAGLAAYIFSTNIKRAWRVTEALEYGIVGVNEGLVSTEVAPFGGVKQSGLGREGSKY 505
Query: 392 GMDEFLEIKYVCLGDMN 408
GMDE+LE+KYVCLG M+
Sbjct: 506 GMDEYLEMKYVCLGSMS 522
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356528645|ref|XP_003532910.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/379 (82%), Positives = 350/379 (92%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ YGA FIEF AEEAKR+YG+I+PA DRRLFVLKQPVGV GAITPWNFPLAMITRKV
Sbjct: 159 EIVYGAGFIEFAAEEAKRIYGDIVPAPFSDRRLFVLKQPVGVVGAITPWNFPLAMITRKV 218
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALACGCTVV+KPSE TPLTALAA EL++QAGIPPGVVNVVMGNAPDIGDALL SPQVR
Sbjct: 219 GPALACGCTVVIKPSELTPLTALAAVELSIQAGIPPGVVNVVMGNAPDIGDALLASPQVR 278
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
KITFTGSTAVGKKLMAG+A TVKKVSLELGGNAPCIVFDDADL+VAV G LAAKFRNSGQ
Sbjct: 279 KITFTGSTAVGKKLMAGSAETVKKVSLELGGNAPCIVFDDADLDVAVKGTLAAKFRNSGQ 338
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANR++VQEGIYEKFA+A AV+N+KVGDGF EGV QGPLIN+AA++KVE+ + DA
Sbjct: 339 TCVCANRIIVQEGIYEKFANALRDAVQNMKVGDGFSEGVSQGPLINEAAVKKVESLIHDA 398
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
SKGAKV+LGG+RHSLG+TFYEPTV+S+V S+M +SREE FGPVAPLL FKTEEEAI +A
Sbjct: 399 TSKGAKVILGGKRHSLGLTFYEPTVISDVNSDMHISREEAFGPVAPLLRFKTEEEAIRIA 458
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDTNAGL +Y+FTN++QR+WRV+EALEYGLVGVNEG+ISTEVAPFGG KQSGLGREGSKY
Sbjct: 459 NDTNAGLGSYVFTNSIQRSWRVAEALEYGLVGVNEGVISTEVAPFGGFKQSGLGREGSKY 518
Query: 392 GMDEFLEIKYVCLGDMNRK 410
GMDE+LEIKYVC G+MN++
Sbjct: 519 GMDEYLEIKYVCFGNMNKE 537
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224109088|ref|XP_002315079.1| predicted protein [Populus trichocarpa] gi|222864119|gb|EEF01250.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/379 (86%), Positives = 360/379 (94%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV YGA FIEFYAEEAKRVYG+IIPATL DRRLFVLKQPVGV GAITPWNFPLAMITRKV
Sbjct: 158 EVSYGASFIEFYAEEAKRVYGDIIPATLGDRRLFVLKQPVGVVGAITPWNFPLAMITRKV 217
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALACGCTVV+KPSE TPLTALAAAELALQAGIPPGV+NVVMG APDIGDALL S +VR
Sbjct: 218 GPALACGCTVVLKPSELTPLTALAAAELALQAGIPPGVLNVVMGKAPDIGDALLASHEVR 277
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
KITFTGSTAVGKKLMAGAAGTVK++SLELGGNAPCIVFDDADL+VAV G+LAAKFRNSGQ
Sbjct: 278 KITFTGSTAVGKKLMAGAAGTVKRLSLELGGNAPCIVFDDADLDVAVKGSLAAKFRNSGQ 337
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANR++VQEGIY+KFAD+FSKAV++++VGDGF EGV QGPLIN+AA++KVE+FV+DA
Sbjct: 338 TCVCANRIIVQEGIYDKFADSFSKAVQSMQVGDGFSEGVTQGPLINEAAVQKVESFVQDA 397
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
+ KGAKVLLGG+RHSLGM FYEPT++SNV ML+SREEVFGPVAPLL FKTEEEAI MA
Sbjct: 398 IFKGAKVLLGGKRHSLGMNFYEPTIISNVTEAMLLSREEVFGPVAPLLRFKTEEEAILMA 457
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
N+T AGLAAYIFTNN+QR+WRV+EALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY
Sbjct: 458 NNTKAGLAAYIFTNNVQRSWRVTEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 517
Query: 392 GMDEFLEIKYVCLGDMNRK 410
GMDE+LE+KYVCLGDMNRK
Sbjct: 518 GMDEYLEMKYVCLGDMNRK 536
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255577875|ref|XP_002529810.1| succinate semialdehyde dehydrogenase, putative [Ricinus communis] gi|223530687|gb|EEF32559.1| succinate semialdehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/371 (86%), Positives = 351/371 (94%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV YGA FIEF+AEEAKRVYG+IIPATL DRRL VLKQPVGV GAITPWNFPLAMITRKV
Sbjct: 226 EVSYGASFIEFFAEEAKRVYGDIIPATLGDRRLLVLKQPVGVVGAITPWNFPLAMITRKV 285
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALACGCTVVVKPSE TPLTALAAAELALQAGIPPGV+N+VMG APDIGDALL SPQVR
Sbjct: 286 GPALACGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNLVMGKAPDIGDALLASPQVR 345
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
KITFTGSTAVGKKLM GAA TVK+VSLELGGNAPCIVFDDADL+VAV G+LAAKFRNSGQ
Sbjct: 346 KITFTGSTAVGKKLMEGAARTVKRVSLELGGNAPCIVFDDADLDVAVKGSLAAKFRNSGQ 405
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANR++VQEGIY+KFA+ FS+AV+NL+VGDGF EGV QGPLIN+AAL+KVE+FV+DA
Sbjct: 406 TCVCANRLIVQEGIYDKFAETFSRAVQNLQVGDGFTEGVAQGPLINEAALQKVESFVQDA 465
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
+SKGAKVL+GG+RHSLG TFYEPTV+S+VKSEM+VSREEVFGPVAP+L FKTEEEAI +A
Sbjct: 466 ISKGAKVLIGGKRHSLGRTFYEPTVISDVKSEMVVSREEVFGPVAPILRFKTEEEAISIA 525
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDTNAGLAAYIFTNN QR+WRV+EALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY
Sbjct: 526 NDTNAGLAAYIFTNNTQRSWRVAEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 585
Query: 392 GMDEFLEIKYV 402
GMDE+LE+ V
Sbjct: 586 GMDEYLEVSIV 596
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15219379|ref|NP_178062.1| succinate-semialdehyde dehydrogenase [Arabidopsis thaliana] gi|118575126|sp|Q9SAK4.2|SSDH_ARATH RecName: Full=Succinate-semialdehyde dehydrogenase, mitochondrial; Short=At-SSADH1; AltName: Full=Aldehyde dehydrogenase family 5 member F1; AltName: Full=NAD(+)-dependent succinic semialdehyde dehydrogenase; Flags: Precursor gi|6684442|gb|AAF23590.1|AF117335_1 succinic semialdehyde dehydrogenase [Arabidopsis thaliana] gi|16226915|gb|AAL16297.1|AF428367_1 At1g79440/T8K14_14 [Arabidopsis thaliana] gi|15810165|gb|AAL07226.1| putative succinic semialdehyde dehydrogenase gabD [Arabidopsis thaliana] gi|332198122|gb|AEE36243.1| succinate-semialdehyde dehydrogenase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 635 bits (1639), Expect = e-180, Method: Compositional matrix adjust.
Identities = 317/379 (83%), Positives = 350/379 (92%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV YGA FIE+YAEEAKRVYG+IIP L DRRL VLKQPVGV GAITPWNFPLAMITRKV
Sbjct: 150 EVAYGASFIEYYAEEAKRVYGDIIPPNLSDRRLLVLKQPVGVVGAITPWNFPLAMITRKV 209
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALA GCTVVVKPSE TPLTALAAAELALQAG+PPG +NVVMGNAP+IGDALLTSPQVR
Sbjct: 210 GPALASGCTVVVKPSELTPLTALAAAELALQAGVPPGALNVVMGNAPEIGDALLTSPQVR 269
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
KITFTGSTAVGKKLMA AA TVKKVSLELGGNAP IVFDDADL+VAV G LAAKFRNSGQ
Sbjct: 270 KITFTGSTAVGKKLMAAAAPTVKKVSLELGGNAPSIVFDDADLDVAVKGTLAAKFRNSGQ 329
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANRVLVQ+GIY+KFA+AFS+AV+ L+VGDGF +G QGPLIN AA++KVETFV+DA
Sbjct: 330 TCVCANRVLVQDGIYDKFAEAFSEAVQKLEVGDGFRDGTTQGPLINDAAVQKVETFVQDA 389
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
VSKGAK+++GG+RHSLGMTFYEPTV+ +V M++S+EE+FGPVAPL+ FKTEE+AI +A
Sbjct: 390 VSKGAKIIIGGKRHSLGMTFYEPTVIRDVSDNMIMSKEEIFGPVAPLIRFKTEEDAIRIA 449
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDT AGLAAYIFTN++QR+WRV EALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY
Sbjct: 450 NDTIAGLAAYIFTNSVQRSWRVFEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 509
Query: 392 GMDEFLEIKYVCLGDMNRK 410
GMDE+LEIKYVCLGDMNR
Sbjct: 510 GMDEYLEIKYVCLGDMNRH 528
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|4835765|gb|AAD30232.1|AC007202_14 Is a member of the PF|00171 aldehyde dehydrogenase family. ESTs gb|T21534, gb|N65241 and gb|AA395614 come from this gene [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 317/379 (83%), Positives = 350/379 (92%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV YGA FIE+YAEEAKRVYG+IIP L DRRL VLKQPVGV GAITPWNFPLAMITRKV
Sbjct: 131 EVAYGASFIEYYAEEAKRVYGDIIPPNLSDRRLLVLKQPVGVVGAITPWNFPLAMITRKV 190
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALA GCTVVVKPSE TPLTALAAAELALQAG+PPG +NVVMGNAP+IGDALLTSPQVR
Sbjct: 191 GPALASGCTVVVKPSELTPLTALAAAELALQAGVPPGALNVVMGNAPEIGDALLTSPQVR 250
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
KITFTGSTAVGKKLMA AA TVKKVSLELGGNAP IVFDDADL+VAV G LAAKFRNSGQ
Sbjct: 251 KITFTGSTAVGKKLMAAAAPTVKKVSLELGGNAPSIVFDDADLDVAVKGTLAAKFRNSGQ 310
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANRVLVQ+GIY+KFA+AFS+AV+ L+VGDGF +G QGPLIN AA++KVETFV+DA
Sbjct: 311 TCVCANRVLVQDGIYDKFAEAFSEAVQKLEVGDGFRDGTTQGPLINDAAVQKVETFVQDA 370
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
VSKGAK+++GG+RHSLGMTFYEPTV+ +V M++S+EE+FGPVAPL+ FKTEE+AI +A
Sbjct: 371 VSKGAKIIIGGKRHSLGMTFYEPTVIRDVSDNMIMSKEEIFGPVAPLIRFKTEEDAIRIA 430
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDT AGLAAYIFTN++QR+WRV EALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY
Sbjct: 431 NDTIAGLAAYIFTNSVQRSWRVFEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 490
Query: 392 GMDEFLEIKYVCLGDMNRK 410
GMDE+LEIKYVCLGDMNR
Sbjct: 491 GMDEYLEIKYVCLGDMNRH 509
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225462297|ref|XP_002265514.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 315/377 (83%), Positives = 352/377 (93%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV+YGA FIEF AEEAKR+YG+IIP+ L DRRL VLKQPVGV GAITPWNFPLAMITRKV
Sbjct: 152 EVNYGAAFIEFSAEEAKRIYGDIIPSPLADRRLLVLKQPVGVVGAITPWNFPLAMITRKV 211
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALACGCTVV+KPSE TPLTALAAAELALQAGIPPG VNVV GNAP+IGDALL S QVR
Sbjct: 212 GPALACGCTVVIKPSELTPLTALAAAELALQAGIPPGAVNVVFGNAPEIGDALLASRQVR 271
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
KITFTGSTAVGKKLMAGAA TVKKVSLELGGNAPCI+FDDADL VAV GAL KFRNSGQ
Sbjct: 272 KITFTGSTAVGKKLMAGAAQTVKKVSLELGGNAPCIIFDDADLEVAVKGALGTKFRNSGQ 331
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANR+LVQEGIYEKFA AFS+AV++++VG+GF EGVVQGPLIN+AA++KVE+FV+DA
Sbjct: 332 TCVCANRILVQEGIYEKFAIAFSQAVQSMQVGEGFTEGVVQGPLINEAAVQKVESFVKDA 391
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
VSKGAKVLLGG+RHSLGMTFYEPTV+ ++K++ML++R EVFGPVAPLL FKTEEEAI +A
Sbjct: 392 VSKGAKVLLGGKRHSLGMTFYEPTVIGDIKNDMLIARNEVFGPVAPLLRFKTEEEAIRIA 451
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDTNAGLAAY+FT N+QR WRV+EALEYGLVGVNEGL+STEVAPFGGVK+SGLGREGSKY
Sbjct: 452 NDTNAGLAAYVFTENVQRMWRVTEALEYGLVGVNEGLVSTEVAPFGGVKESGLGREGSKY 511
Query: 392 GMDEFLEIKYVCLGDMN 408
GMDEFLE+KYVC G+++
Sbjct: 512 GMDEFLEMKYVCFGNIS 528
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297736107|emb|CBI24145.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 315/377 (83%), Positives = 352/377 (93%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV+YGA FIEF AEEAKR+YG+IIP+ L DRRL VLKQPVGV GAITPWNFPLAMITRKV
Sbjct: 147 EVNYGAAFIEFSAEEAKRIYGDIIPSPLADRRLLVLKQPVGVVGAITPWNFPLAMITRKV 206
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALACGCTVV+KPSE TPLTALAAAELALQAGIPPG VNVV GNAP+IGDALL S QVR
Sbjct: 207 GPALACGCTVVIKPSELTPLTALAAAELALQAGIPPGAVNVVFGNAPEIGDALLASRQVR 266
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
KITFTGSTAVGKKLMAGAA TVKKVSLELGGNAPCI+FDDADL VAV GAL KFRNSGQ
Sbjct: 267 KITFTGSTAVGKKLMAGAAQTVKKVSLELGGNAPCIIFDDADLEVAVKGALGTKFRNSGQ 326
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANR+LVQEGIYEKFA AFS+AV++++VG+GF EGVVQGPLIN+AA++KVE+FV+DA
Sbjct: 327 TCVCANRILVQEGIYEKFAIAFSQAVQSMQVGEGFTEGVVQGPLINEAAVQKVESFVKDA 386
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
VSKGAKVLLGG+RHSLGMTFYEPTV+ ++K++ML++R EVFGPVAPLL FKTEEEAI +A
Sbjct: 387 VSKGAKVLLGGKRHSLGMTFYEPTVIGDIKNDMLIARNEVFGPVAPLLRFKTEEEAIRIA 446
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDTNAGLAAY+FT N+QR WRV+EALEYGLVGVNEGL+STEVAPFGGVK+SGLGREGSKY
Sbjct: 447 NDTNAGLAAYVFTENVQRMWRVTEALEYGLVGVNEGLVSTEVAPFGGVKESGLGREGSKY 506
Query: 392 GMDEFLEIKYVCLGDMN 408
GMDEFLE+KYVC G+++
Sbjct: 507 GMDEFLEMKYVCFGNIS 523
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 410 | ||||||
| TAIR|locus:2206405 | 528 | ALDH5F1 "AT1G79440" [Arabidops | 0.921 | 0.715 | 0.804 | 3.1e-163 | |
| TIGR_CMR|SO_1275 | 482 | SO_1275 "succinate-semialdehyd | 0.909 | 0.773 | 0.603 | 1.5e-120 | |
| UNIPROTKB|E1BDP3 | 526 | ALDH5A1 "Uncharacterized prote | 0.917 | 0.714 | 0.605 | 3.2e-120 | |
| UNIPROTKB|Q9I6M5 | 483 | gabD "Succinate-semialdehyde d | 0.912 | 0.774 | 0.588 | 3.2e-120 | |
| UNIPROTKB|E1BRI3 | 516 | ALDH5A1 "Uncharacterized prote | 0.917 | 0.728 | 0.602 | 5.2e-120 | |
| UNIPROTKB|P25526 | 482 | gabD [Escherichia coli K-12 (t | 0.912 | 0.775 | 0.577 | 6e-119 | |
| UNIPROTKB|F1PP35 | 442 | ALDH5A1 "Uncharacterized prote | 0.912 | 0.846 | 0.595 | 9.8e-119 | |
| TIGR_CMR|SPO_A0275 | 486 | SPO_A0275 "succinate-semialdeh | 0.912 | 0.769 | 0.597 | 9.8e-119 | |
| UNIPROTKB|Q3MSM3 | 535 | ALDH5A1 "Succinate-semialdehyd | 0.917 | 0.702 | 0.6 | 4.2e-118 | |
| UNIPROTKB|C9J8Q5 | 507 | ALDH5A1 "Succinate-semialdehyd | 0.917 | 0.741 | 0.597 | 5.4e-118 |
| TAIR|locus:2206405 ALDH5F1 "AT1G79440" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1589 (564.4 bits), Expect = 3.1e-163, P = 3.1e-163
Identities = 304/378 (80%), Positives = 337/378 (89%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV YGA FIE+YAEEAKRVYG+IIP L DRRL VLKQPVGV GAITPWNFPLAMITRKV
Sbjct: 150 EVAYGASFIEYYAEEAKRVYGDIIPPNLSDRRLLVLKQPVGVVGAITPWNFPLAMITRKV 209
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALA GCTVVVKPSE TP G+PPG +NVVMGNAP+IGDALLTSPQVR
Sbjct: 210 GPALASGCTVVVKPSELTPLTALAAAELALQAGVPPGALNVVMGNAPEIGDALLTSPQVR 269
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
KITFTGSTAVGKKLMA AA TVKKVSLELGGNAP IVFDDADL+VAV G LAAKFRNSGQ
Sbjct: 270 KITFTGSTAVGKKLMAAAAPTVKKVSLELGGNAPSIVFDDADLDVAVKGTLAAKFRNSGQ 329
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANRVLVQ+GIY+KFA+AFS+AV+ L+VGDGF +G QGPLIN AA++KVETFV+DA
Sbjct: 330 TCVCANRVLVQDGIYDKFAEAFSEAVQKLEVGDGFRDGTTQGPLINDAAVQKVETFVQDA 389
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
VSKGAK+++GG+RHSLGMTFYEPTV+ +V M++S+EE+FGPVAPL+ FKTEE+AI +A
Sbjct: 390 VSKGAKIIIGGKRHSLGMTFYEPTVIRDVSDNMIMSKEEIFGPVAPLIRFKTEEDAIRIA 449
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDT AGLAAYIFTN++QR+WRV EALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY
Sbjct: 450 NDTIAGLAAYIFTNSVQRSWRVFEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 509
Query: 392 GMDEFLEIKYVCLGDMNR 409
GMDE+LEIKYVCLGDMNR
Sbjct: 510 GMDEYLEIKYVCLGDMNR 527
|
|
| TIGR_CMR|SO_1275 SO_1275 "succinate-semialdehyde dehydrogenase" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 1186 (422.6 bits), Expect = 1.5e-120, P = 1.5e-120
Identities = 225/373 (60%), Positives = 281/373 (75%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV Y A FIE++AEEAKR+YG+ IP D+R+ V+KQPVGV AITPWNFP AMITRK
Sbjct: 108 EVTYAASFIEWFAEEAKRIYGDTIPGHQGDKRIMVIKQPVGVTAAITPWNFPAAMITRKA 167
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PALA GCT+VVKP+ TP GIP GV +V+ G+A IG+ + T+P VR
Sbjct: 168 APALAAGCTMVVKPAPQTPFTALALAVLAERAGIPAGVFSVITGDAIAIGNEMCTNPIVR 227
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
K++FTGST VG KLMA A T+KK+SLELGGNAP IVFDDA+++ AV GA+ AK+RN+GQ
Sbjct: 228 KLSFTGSTNVGIKLMAQCAPTLKKLSLELGGNAPFIVFDDANIDAAVEGAMIAKYRNAGQ 287
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANR+ VQ G+Y++FA+ S AV LKVG+G GV GPLIN AA+EKV++ +EDA
Sbjct: 288 TCVCANRIYVQAGVYDEFAEKLSMAVAKLKVGEGIIAGVTTGPLINAAAVEKVQSHLEDA 347
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
+ KGA VL GG+ H LG F+EPTVL+N M V+REE FGP+APL F ++ I A
Sbjct: 348 IKKGATVLAGGKVHELGGNFFEPTVLTNADKSMRVAREETFGPLAPLFKFNDVDDVIKQA 407
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDT GLAAY + ++ W+V+E+LEYG+VGVN GLISTEVAPFGG+K SGLGREGSKY
Sbjct: 408 NDTEFGLAAYFYGRDISLVWKVAESLEYGMVGVNTGLISTEVAPFGGMKSSGLGREGSKY 467
Query: 392 GMDEFLEIKYVCL 404
G++E+LEIKY+C+
Sbjct: 468 GIEEYLEIKYICM 480
|
|
| UNIPROTKB|E1BDP3 ALDH5A1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1183 (421.5 bits), Expect = 3.2e-120, P = 3.2e-120
Identities = 230/380 (60%), Positives = 285/380 (75%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ Y A F+E+++EEA+RVYG+II +RR VLKQPVGVA ITPWNFP AMITRKV
Sbjct: 147 EILYSANFLEWFSEEARRVYGDIISTPAKERRALVLKQPVGVAAVITPWNFPSAMITRKV 206
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVV---MGNAPDIGDALLTSP 148
G ALA GCTVVVKP+E TP GIPPGV NV+ A ++G+AL T P
Sbjct: 207 GAALAAGCTVVVKPAEDTPFSALALAELANQAGIPPGVYNVIPCSQKKAKEVGEALCTDP 266
Query: 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
V KI+FTGSTA GK L+ AA +VK+VS+ELGG+AP IVFD A+++ AV GA+A+KFRN
Sbjct: 267 LVSKISFTGSTATGKVLLHHAANSVKRVSMELGGHAPFIVFDSANVDQAVAGAMASKFRN 326
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETF 267
SGQTCVC+NR LVQ GI++ F F++A+K NL VG+GF E QGPLIN A+EKVE
Sbjct: 327 SGQTCVCSNRFLVQSGIHDSFVKKFAEAIKTNLHVGNGFDERTTQGPLINAKAVEKVEKH 386
Query: 268 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
V DA+SKGA V+ GG+RH +G F+EPT+LSNV +ML S+EE FGPVAP++ F TEEEA
Sbjct: 387 VSDAISKGATVVTGGKRHHVGKNFFEPTLLSNVTRDMLCSQEETFGPVAPVIKFNTEEEA 446
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 387
+ +AN N GLA Y ++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGRE
Sbjct: 447 VAIANAANVGLAGYFYSQDPAQIWRVAERLEVGMVGVNEGLISSVECPFGGVKQSGLGRE 506
Query: 388 GSKYGMDEFLEIKYVCLGDM 407
GSKYG+DE+LE+KYVC G +
Sbjct: 507 GSKYGIDEYLELKYVCFGGL 526
|
|
| UNIPROTKB|Q9I6M5 gabD "Succinate-semialdehyde dehydrogenase" [Pseudomonas aeruginosa PAO1 (taxid:208964)] | Back alignment and assigned GO terms |
|---|
Score = 1183 (421.5 bits), Expect = 3.2e-120, P = 3.2e-120
Identities = 220/374 (58%), Positives = 281/374 (75%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ Y A F+E++ EEAKR+YG+ IP PD+R+ V+KQP+GV AITPWNFP AMITRK
Sbjct: 108 EIAYAASFLEWFGEEAKRIYGDTIPGHQPDKRIIVIKQPIGVTAAITPWNFPSAMITRKA 167
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALA GCT+V+KP+ TP GIP GV +VV G+A ++G L ++P VR
Sbjct: 168 GPALAAGCTMVLKPASQTPYSALALAELAERAGIPKGVFSVVTGSAGEVGGELTSNPIVR 227
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
K+TFTGST +G++LMA A +KKVSLELGGNAP IVFDDADL+ AV GAL +K+RN+GQ
Sbjct: 228 KLTFTGSTEIGRQLMAECAQDIKKVSLELGGNAPFIVFDDADLDAAVEGALISKYRNNGQ 287
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANR+ VQ+G+Y+ F D AV L +G+G GV GPLI+ A+ KVE + DA
Sbjct: 288 TCVCANRLYVQDGVYDAFVDKLKAAVAKLNIGNGLEAGVTTGPLIDAKAVAKVEEHIADA 347
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
VSKGAKV+ GG+ H+LG TF+EPT+L +V LVS++E FGP+AP+ FK E E I M+
Sbjct: 348 VSKGAKVVSGGKPHALGGTFFEPTILVDVPKNALVSKDETFGPLAPVFRFKDEAEVIAMS 407
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDT GLA+Y + +L R +RV+E LEYG+VG+N GLIS EVAPFGG+K SGLGREGSKY
Sbjct: 408 NDTEFGLASYFYARDLARVFRVAEQLEYGMVGINTGLISNEVAPFGGIKASGLGREGSKY 467
Query: 392 GMDEFLEIKYVCLG 405
G++++LEIKY+CLG
Sbjct: 468 GIEDYLEIKYLCLG 481
|
|
| UNIPROTKB|E1BRI3 ALDH5A1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1181 (420.8 bits), Expect = 5.2e-120, P = 5.2e-120
Identities = 229/380 (60%), Positives = 289/380 (76%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV Y A F+E++AEEA+RVYG++IPA+ DRR+ VLKQPVGVA ITPWNFP AMITRKV
Sbjct: 137 EVLYSASFLEWFAEEARRVYGDVIPASAKDRRILVLKQPVGVAAIITPWNFPSAMITRKV 196
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVV---MGNAPDIGDALLTSP 148
G ALA GCTVVVKP+E TP GIP GV NVV A +G+ L T P
Sbjct: 197 GAALAAGCTVVVKPAEDTPLSALALGELANQAGIPAGVYNVVPCSRQQAAAVGEVLCTDP 256
Query: 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
V KI+FTGSTA GK L+ AAGTVK+VS+ELGG+AP IVFD AD++ AV GALA+K+RN
Sbjct: 257 LVAKISFTGSTATGKILLKHAAGTVKRVSMELGGHAPFIVFDSADVDRAVAGALASKYRN 316
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVGDGFGEGVVQGPLINKAALEKVETF 267
SGQTCVC NR LVQ+GI++ F F+KA+++ L+VG GF QGPLIN+ A+EKVE
Sbjct: 317 SGQTCVCTNRFLVQKGIHDTFVQKFAKAIESELRVGSGFDAKTTQGPLINEKAVEKVERH 376
Query: 268 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
+ DAVS+GA V+ GG+RHSLG F+EPT+LSNV ++ML ++EE FGP+AP++ F TE EA
Sbjct: 377 INDAVSQGASVVTGGKRHSLGKNFFEPTLLSNVTTKMLCTQEETFGPLAPVIKFDTEAEA 436
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 387
I +AN + GLA Y ++ + + WRV+E LE G+VGVNEG++S+ +PFGG+KQSG+GRE
Sbjct: 437 IAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGIVSSVESPFGGIKQSGIGRE 496
Query: 388 GSKYGMDEFLEIKYVCLGDM 407
GSKYG+DE+LEIKYVC G +
Sbjct: 497 GSKYGIDEYLEIKYVCFGGL 516
|
|
| UNIPROTKB|P25526 gabD [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 1171 (417.3 bits), Expect = 6.0e-119, P = 6.0e-119
Identities = 216/374 (57%), Positives = 279/374 (74%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ Y A FIE++AEE KR+YG+ IP D+RL V+KQP+GV AITPWNFP AMITRK
Sbjct: 108 EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKA 167
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALA GCT+V+KP+ TP G+P GV NVV G+A +G+ L ++P VR
Sbjct: 168 GPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVR 227
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
K++FTGST +G++LM A +KKVSLELGGNAP IVFDDADL+ AV GALA+KFRN+GQ
Sbjct: 228 KLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQ 287
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANR+ VQ+G+Y++FA+ +AV L +GDG GV GPLI++ A+ KVE + DA
Sbjct: 288 TCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADA 347
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
+ KGA+V+ GG+ H G F++PT+L +V + VS+EE FGP+APL FK E + I A
Sbjct: 348 LEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQA 407
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDT GLAAY + +L R +RV EALEYG+VG+N G+IS EVAPFGG+K SGLGREGSKY
Sbjct: 408 NDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKY 467
Query: 392 GMDEFLEIKYVCLG 405
G++++LEIKY+C+G
Sbjct: 468 GIEDYLEIKYMCIG 481
|
|
| UNIPROTKB|F1PP35 ALDH5A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1169 (416.6 bits), Expect = 9.8e-119, P = 9.8e-119
Identities = 225/378 (59%), Positives = 286/378 (75%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ Y A F+E+++EEA+R+YG++I ++R VLKQP+GVA ITPWNFP AMITRKV
Sbjct: 26 EIVYSALFLEWFSEEARRIYGDVIYTPAKEKRALVLKQPLGVAAVITPWNFPSAMITRKV 85
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVV---MGNAPDIGDALLTSP 148
G ALA GCTVVVKP+E TP GIPPGV NV+ A ++G+AL T P
Sbjct: 86 GAALAAGCTVVVKPAEHTPFSALALAELANQAGIPPGVYNVIPCSRKKAKEVGEALCTDP 145
Query: 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
V KI+FTGSTA GK L+ AAG+VK+VS+ELGG+AP IVFD A+++ AV GA+A+KFRN
Sbjct: 146 LVSKISFTGSTATGKVLLHHAAGSVKRVSMELGGHAPFIVFDSANVDQAVAGAMASKFRN 205
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETF 267
SGQTCVC+NR LVQ GI++ F F++A+K NL+VG+GF E QGPLI++ A+EKVE
Sbjct: 206 SGQTCVCSNRFLVQRGIHDSFVKKFAEAMKTNLRVGNGFEERTTQGPLIDEKAVEKVEKH 265
Query: 268 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
V DAVSKGA ++ GG+RH LG F+EPT+LSNV +ML S EE FGP+AP++ F TEEEA
Sbjct: 266 VSDAVSKGATIVTGGKRHQLGKNFFEPTLLSNVTRDMLCSHEETFGPLAPVIKFDTEEEA 325
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 387
+ +AN + GLA Y ++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGRE
Sbjct: 326 VAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGRE 385
Query: 388 GSKYGMDEFLEIKYVCLG 405
GSKYG+DE+LE+KYVC G
Sbjct: 386 GSKYGIDEYLELKYVCFG 403
|
|
| TIGR_CMR|SPO_A0275 SPO_A0275 "succinate-semialdehyde dehydrogenase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 1169 (416.6 bits), Expect = 9.8e-119, P = 9.8e-119
Identities = 224/375 (59%), Positives = 282/375 (75%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ YGA F+E++AEEAKRVYGE IP D+R+ VLKQPVGV G+ITPWNFP AMI RKV
Sbjct: 109 EILYGASFLEWFAEEAKRVYGETIPGHQRDKRIVVLKQPVGVVGSITPWNFPNAMIARKV 168
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMG-NAPDIGDALLTSPQV 150
PALA GCT V +P+E TP G+P GV NV+ +A +G L +P+V
Sbjct: 169 APALAVGCTFVARPAELTPLSALAMAVLAERAGVPAGVFNVIPSQDAAGVGAELCANPKV 228
Query: 151 RKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 210
KITFTGST VG+ LM A T+KK+SLELGGNAP IVFDDADL+ AV+GA+ AKFRN+G
Sbjct: 229 AKITFTGSTRVGRLLMQQCAPTIKKMSLELGGNAPFIVFDDADLDAAVDGAMIAKFRNNG 288
Query: 211 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 270
QTCVCANR+ VQ +Y+ FAD + L+VG+GF GV GPLIN AA+ KVE + D
Sbjct: 289 QTCVCANRIYVQARVYDAFADKLAAKAAQLRVGNGFDTGVTTGPLINSAAVSKVEAHIAD 348
Query: 271 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
A++ GA+V+LGG R LG TF+ PTVL +V +MLV REE FGP+A L+ F++E+E I M
Sbjct: 349 ALAGGAEVVLGGTRAPLGGTFFAPTVLRDVTRDMLVCREETFGPLAALVRFESEDEVIDM 408
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 390
AND+ GLAAY ++ +L R WR++EALE G+VGVN GLISTEVAPFGG+KQSGLGREGS+
Sbjct: 409 ANDSEFGLAAYFYSRDLARVWRMAEALESGMVGVNTGLISTEVAPFGGIKQSGLGREGSR 468
Query: 391 YGMDEFLEIKYVCLG 405
+G++++LE+KY+CLG
Sbjct: 469 HGIEDYLELKYLCLG 483
|
|
| UNIPROTKB|Q3MSM3 ALDH5A1 "Succinate-semialdehyde dehydrogenase, mitochondrial" [Hylobates lar (taxid:9580)] | Back alignment and assigned GO terms |
|---|
Score = 1163 (414.5 bits), Expect = 4.2e-118, P = 4.2e-118
Identities = 228/380 (60%), Positives = 284/380 (74%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ Y A F+E+++EEA+RVYG+II DRR VLKQP+GVA ITPWNFP AMITRKV
Sbjct: 156 EILYSAFFLEWFSEEARRVYGDIIYTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV 215
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVV---MGNAPDIGDALLTSP 148
G ALA GCTVVVKP+E TP GIP GV NV+ NA ++G+A+ T P
Sbjct: 216 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDP 275
Query: 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
V KI+FTGST GK L+ AA +VK+VS+ELGG AP IVFD A+++ AV GALA+KFRN
Sbjct: 276 LVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGALASKFRN 335
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETF 267
+GQTCVC+NR LVQ GI++ F AF++A+K NL VG+GF EG QGPLIN+ A+EKVE
Sbjct: 336 TGQTCVCSNRFLVQRGIHDAFVKAFAEAMKKNLHVGNGFEEGTTQGPLINEKAVEKVEKQ 395
Query: 268 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
V DAVSKGA ++ GG+RH LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEA
Sbjct: 396 VNDAVSKGATIVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEA 455
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 387
I +AN + GLA Y ++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGRE
Sbjct: 456 IAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGRE 515
Query: 388 GSKYGMDEFLEIKYVCLGDM 407
GSKYG+DE+LE+KYVC G +
Sbjct: 516 GSKYGIDEYLELKYVCYGGL 535
|
|
| UNIPROTKB|C9J8Q5 ALDH5A1 "Succinate-semialdehyde dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1162 (414.1 bits), Expect = 5.4e-118, P = 5.4e-118
Identities = 227/380 (59%), Positives = 285/380 (75%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ Y A F+E+++EEA+RVYG+II DRR VLKQP+GVA ITPWNFP AMITRKV
Sbjct: 128 EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV 187
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVV---MGNAPDIGDALLTSP 148
G ALA GCTVVVKP+E TP GIP GV NV+ NA ++G+A+ T P
Sbjct: 188 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDP 247
Query: 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
V KI+FTGST GK L+ AA +VK+VS+ELGG AP IVFD A+++ AV GA+A+KFRN
Sbjct: 248 LVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRN 307
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETF 267
+GQTCVC+N+ LVQ GI++ F AF++A+K NL+VG+GF EG QGPLIN+ A+EKVE
Sbjct: 308 TGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQ 367
Query: 268 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
V DAVSKGA V+ GG+RH LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEA
Sbjct: 368 VNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEA 427
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 387
I +AN + GLA Y ++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGRE
Sbjct: 428 IAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGRE 487
Query: 388 GSKYGMDEFLEIKYVCLGDM 407
GSKYG+DE+LE+KYVC G +
Sbjct: 488 GSKYGIDEYLELKYVCYGGL 507
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8BWF0 | SSDH_MOUSE | 1, ., 2, ., 1, ., 2, 4 | 0.5879 | 0.9512 | 0.7456 | yes | no |
| P51649 | SSDH_HUMAN | 1, ., 2, ., 1, ., 2, 4 | 0.6055 | 0.9512 | 0.7289 | yes | no |
| Q9US47 | SSDH1_SCHPO | 1, ., 2, ., 1, ., 1, 6 | 0.5370 | 0.9170 | 0.6873 | yes | no |
| Q9SAK4 | SSDH_ARATH | 1, ., 2, ., 1, ., 2, 4 | 0.8364 | 0.9243 | 0.7178 | yes | no |
| P94428 | GABD_BACSU | 1, ., 2, ., 1, ., 7, 9 | 0.5490 | 0.9121 | 0.8095 | yes | no |
| Q6A2H0 | SSDH_PANTR | 1, ., 2, ., 1, ., 2, 4 | 0.6055 | 0.9512 | 0.7289 | yes | no |
| P51650 | SSDH_RAT | 1, ., 2, ., 1, ., 2, 4 | 0.5954 | 0.9512 | 0.7456 | yes | no |
| P38067 | UGA2_YEAST | 1, ., 2, ., 1, ., 1, 6 | 0.5250 | 0.9170 | 0.7565 | yes | no |
| B9F3B6 | SSDH_ORYSJ | 1, ., 2, ., 1, ., 2, 4 | 0.7924 | 0.9609 | 0.7476 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.2.1 | 0.976 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 410 | |||
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 0.0 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 0.0 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 0.0 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 0.0 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 1e-178 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-173 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 1e-157 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 1e-153 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 1e-153 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 1e-150 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-146 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 1e-142 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 1e-138 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 1e-138 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 1e-137 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 1e-136 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 1e-135 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 1e-132 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 1e-132 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 1e-130 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 1e-129 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 1e-129 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 1e-129 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 1e-129 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 1e-129 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-128 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 1e-126 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 1e-126 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 1e-124 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-124 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 1e-123 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-123 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 1e-122 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 1e-121 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 1e-121 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-121 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-120 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 1e-120 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 1e-118 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 1e-118 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 1e-118 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 1e-117 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 1e-117 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 1e-115 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 1e-115 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 1e-113 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 1e-113 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 1e-112 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 1e-112 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-111 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 1e-111 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 1e-109 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 1e-108 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 1e-107 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 1e-106 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-105 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-104 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 1e-103 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 1e-102 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-100 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 5e-99 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 3e-95 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 8e-94 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 3e-91 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 1e-89 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 5e-89 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 2e-88 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 3e-87 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 1e-85 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 4e-85 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 3e-83 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 7e-82 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 1e-76 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 2e-76 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 6e-74 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 5e-72 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 7e-72 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 1e-71 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 1e-69 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 2e-69 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 1e-68 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 4e-66 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 2e-65 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 1e-64 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 3e-61 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 7e-61 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 2e-60 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 4e-59 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 2e-57 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 6e-56 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 7e-55 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 9e-52 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 8e-51 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 3e-47 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 2e-46 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 1e-42 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 3e-41 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 6e-39 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 1e-38 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 2e-38 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 4e-34 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 3e-33 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 2e-31 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 3e-25 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 3e-24 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 5e-24 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 7e-22 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 4e-21 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 2e-17 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 9e-10 | |
| cd07127 | 549 | cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradat | 3e-09 | |
| TIGR02288 | 551 | TIGR02288, PaaN_2, phenylacetic acid degradation p | 7e-08 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 2e-07 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 3e-07 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 8e-07 | |
| PRK15398 | 465 | PRK15398, PRK15398, aldehyde dehydrogenase EutE; P | 3e-06 | |
| PRK13805 | 862 | PRK13805, PRK13805, bifunctional acetaldehyde-CoA/ | 6e-05 | |
| TIGR02518 | 488 | TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase ( | 6e-05 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 4e-04 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 755 bits (1952), Expect = 0.0
Identities = 318/377 (84%), Positives = 349/377 (92%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV YGA F+E++AEEAKRVYG+IIP+ PDRRL VLKQPVGV GAITPWNFPLAMITRKV
Sbjct: 122 EVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKV 181
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALA GCTVVVKPSE TPLTALAAAELALQAGIPPGV+NVVMG+AP+IGDALL SP+VR
Sbjct: 182 GPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVR 241
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
KITFTGSTAVGKKLMAGAA TVK+VSLELGGNAP IVFDDADL+VAV GALA+KFRNSGQ
Sbjct: 242 KITFTGSTAVGKKLMAGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQ 301
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANR+LVQEGIY+KFA+AFSKAV+ L VGDGF EGV QGPLIN+AA++KVE+ V+DA
Sbjct: 302 TCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDA 361
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
VSKGAKVLLGG+RHSLG TFYEPTVL +V +ML+ REEVFGPVAPL FKTEEEAI +A
Sbjct: 362 VSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIA 421
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDT AGLAAYIFT +LQR WRVSEALEYG+VGVNEGLISTEVAPFGGVKQSGLGREGSKY
Sbjct: 422 NDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKY 481
Query: 392 GMDEFLEIKYVCLGDMN 408
G+DE+LEIKYVCLG+MN
Sbjct: 482 GIDEYLEIKYVCLGNMN 498
|
Length = 498 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 693 bits (1790), Expect = 0.0
Identities = 247/373 (66%), Positives = 300/373 (80%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EVDY A F+E++AEEA+R+YG IP+ P +R+ V+KQPVGV AITPWNFP AMITRK+
Sbjct: 79 EVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKI 138
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PALA GCTVV+KP+E TPL+ALA AELA +AG+P GV+NVV G+ +IG+AL SP+VR
Sbjct: 139 APALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVR 198
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
KI+FTGSTAVGK LMA AA TVK+VSLELGGNAP IVFDDADL+ AV+GA+A+KFRN+GQ
Sbjct: 199 KISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQ 258
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANR+ V E IY++F + + VK LKVG+G EG GPLIN+ A+EKVE VEDA
Sbjct: 259 TCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDA 318
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
V+KGAKVL GG+R LG FYEPTVL++V +ML+ EE FGPVAP++ F TE+E I A
Sbjct: 319 VAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARA 378
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDT GLAAY+FT +L R WRV+EALE G+VG+N GLIS APFGGVK+SGLGREG K
Sbjct: 379 NDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGREGGKE 438
Query: 392 GMDEFLEIKYVCL 404
G++E+LE KYV L
Sbjct: 439 GLEEYLETKYVSL 451
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 585 bits (1509), Expect = 0.0
Identities = 251/370 (67%), Positives = 301/370 (81%), Gaps = 1/370 (0%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ Y A F+E++AEEAKRVYG+ IP+ D+RL V+KQPVGV AITPWNFP AMITRK
Sbjct: 79 EILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLIVIKQPVGVCAAITPWNFPAAMITRKA 138
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGN-APDIGDALLTSPQV 150
G ALA GCTVVVKP+E TPL+ALA A LA QAGIP GV+NV+ G+ A ++G+ L TSP V
Sbjct: 139 GAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNVITGSRAKEVGNVLTTSPLV 198
Query: 151 RKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 210
RKI+FTGST VGK LM +A TVKKVS+ELGGNAP IVFDDADL+ AV GA+A+KFRN+G
Sbjct: 199 RKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDADLDQAVEGAMASKFRNAG 258
Query: 211 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 270
QTCVCANR+ V +GIY++FA ++AVK LKVG+G EGV QGPLIN+ A+EKVE + D
Sbjct: 259 QTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIAD 318
Query: 271 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
AV KGAKV+ GG+RH LG F+EPTVLSNV ++MLVS+EE FGP+AP+ F EEE I +
Sbjct: 319 AVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVSKEETFGPLAPVFKFDDEEEVIAI 378
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 390
ANDT GLAAY F+ +L R WRV+EALEYG+VG+N GLIS VAPFGGVKQSGLGREGSK
Sbjct: 379 ANDTEVGLAAYFFSRDLSRIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLGREGSK 438
Query: 391 YGMDEFLEIK 400
YG++E+LE K
Sbjct: 439 YGIEEYLETK 448
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 525 bits (1354), Expect = 0.0
Identities = 225/374 (60%), Positives = 291/374 (77%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ Y A FIE++AEE KR+YG+ IP D+RL V+KQP+GV AITPWNFP AMITRK
Sbjct: 108 EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKA 167
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALA GCT+V+KP+ TP +ALA AELA++AGIP GV NVV G+A +G L ++P VR
Sbjct: 168 GPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVR 227
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
K++FTGST +G++LM A +KKVSLELGGNAP IVFDDADL+ AV GALA+KFRN+GQ
Sbjct: 228 KLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQ 287
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANR+ VQ+G+Y++FA+ +AV L +GDG +GV GPLI++ A+ KVE + DA
Sbjct: 288 TCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADA 347
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
+ KGA+V+ GG+ H LG F++PT+L +V + V++EE FGP+APL FK E + I A
Sbjct: 348 LEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQA 407
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDT GLAAY + +L R +RV EALEYG+VG+N G+IS EVAPFGG+K SGLGREGSKY
Sbjct: 408 NDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKY 467
Query: 392 GMDEFLEIKYVCLG 405
G++++LEIKY+C+G
Sbjct: 468 GIEDYLEIKYMCIG 481
|
Length = 482 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 518 bits (1336), Expect = 0.0
Identities = 184/374 (49%), Positives = 251/374 (67%), Gaps = 2/374 (0%)
Query: 30 LREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 89
EV + +YA A+++ GE +P+ P + ++P+GV GAITPWNFPL +
Sbjct: 87 RGEVPRAIDTLRYYAGLARKLEGETLPSD-PGVLAYTRREPLGVVGAITPWNFPLLLAAW 145
Query: 90 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQ 149
K+ PALA G TVV+KPSE TPLTAL AEL +AG+PPGV+NVV G+ ++GDAL+ P
Sbjct: 146 KIAPALAAGNTVVLKPSELTPLTALLLAELFEEAGLPPGVLNVVTGSGSEVGDALVEHPD 205
Query: 150 VRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS 209
V K++FTGST VG+++ AA +K+V+LELGG P IVFDDADL+ AV GA+ F N+
Sbjct: 206 VDKVSFTGSTEVGRRIAKAAAKNLKRVTLELGGKNPLIVFDDADLDAAVEGAVFGAFGNA 265
Query: 210 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 269
GQ C +R+LV E IY++F + +A K+LKVGD GPLI+K E+V +++E
Sbjct: 266 GQVCTAGSRLLVHESIYDEFVERLVEAAKSLKVGDPLDPDTDIGPLISKKQRERVLSYIE 325
Query: 270 DAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 329
DA +GAK+L GG F EPTVL++V +M +++EE+FGPV ++ FK E+EAI
Sbjct: 326 DAKEEGAKLLCGGEAGLEKGYFVEPTVLADVTPDMRIAQEEIFGPVLSVIPFKDEDEAIE 385
Query: 330 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA-PFGGVKQSGLGREG 388
+ANDT GLAA +FTN+L+R RV+ LE G+V +N+ A PFGG KQSG GREG
Sbjct: 386 LANDTEYGLAAGVFTNDLERALRVARRLEAGMVWINDYTTGDPEALPFGGFKQSGFGREG 445
Query: 389 SKYGMDEFLEIKYV 402
K G++E+ E K V
Sbjct: 446 GKEGLEEYTETKTV 459
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 503 bits (1298), Expect = e-178
Identities = 196/377 (51%), Positives = 263/377 (69%), Gaps = 2/377 (0%)
Query: 30 LREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 89
L EV A +YA A+R++GE+IP+ P V ++P+GV GAITPWNFPL +
Sbjct: 56 LGEVARAADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAW 115
Query: 90 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQ 149
K+ PALA G TVV+KPSE TPLTAL AEL +AG+PPGV+NVV G+ ++G AL + P+
Sbjct: 116 KLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPR 175
Query: 150 VRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS 209
V KI+FTGSTAVGK +M AA +K+V+LELGG +P IVFDDADL+ AV GA+ F N+
Sbjct: 176 VDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNA 235
Query: 210 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 269
GQ C A+R+LV E IY++F + + VK LKVG+ GPLI+ A L++V ++E
Sbjct: 236 GQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIE 295
Query: 270 DAVSKGAKVLLGGRR-HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 328
DA ++GAK+L GG+R F PTVL++V +M +++EE+FGPV P++ FK EEEAI
Sbjct: 296 DAKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAI 355
Query: 329 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGRE 387
+ANDT GLAA +FT +L+R RV+E LE G V +N+ + E APFGGVKQSG+GRE
Sbjct: 356 ELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGIGRE 415
Query: 388 GSKYGMDEFLEIKYVCL 404
G YG++E+ E K V +
Sbjct: 416 GGPYGLEEYTEPKTVTI 432
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 492 bits (1269), Expect = e-173
Identities = 198/407 (48%), Positives = 271/407 (66%), Gaps = 6/407 (1%)
Query: 1 MYRVWEE-RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATL 59
+ R+ + + L+ S E+ A FI +YAEEA+R+ GE IP
Sbjct: 64 LRRIADLLEARAEELAALITLETGKPISEARGEIARAADFIRYYAEEARRLEGETIPTD- 122
Query: 60 PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL 119
+ V ++P+GV GAITPWNFPLA+ K+ PALA G TVV+KPSE TPL+ALA AEL
Sbjct: 123 KGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAEL 182
Query: 120 ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLE 179
A +AG+P GV+NVV G ++GDAL+ P V I+FTGSTAVG+ + A AA +K V+LE
Sbjct: 183 AAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKPVTLE 242
Query: 180 LGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN 239
LGG +P IV +DADL+ AV+ A+ F N+GQ C A+R++V E +Y++F + +
Sbjct: 243 LGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVARAAS 302
Query: 240 LKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSN 299
LKVGD GPLI++ L++VE ++EDAV++GA++L GG+R G F EPT+L
Sbjct: 303 LKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRP--GGYFVEPTILEG 360
Query: 300 VKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEY 359
V +M ++REE+FGPV P++ FK EEEAI +ANDT GLAA IFT +L R +RV+ LE
Sbjct: 361 VTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEA 420
Query: 360 GLVGVNEGLISTEV--APFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404
G+VG+N+ ++ PFGGVKQSGLGREG KYG++EF E+K V +
Sbjct: 421 GMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTI 467
|
Length = 472 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 450 bits (1160), Expect = e-157
Identities = 176/374 (47%), Positives = 243/374 (64%), Gaps = 5/374 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV++ A +I++ AE A+R+ GEIIP+ P+ +F+ K P+GV I PWNFP +I RK+
Sbjct: 95 EVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKL 154
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PAL G T+V+KPSE TPL AL AEL +AG+P GV+N+V G +GDAL+ P+V
Sbjct: 155 APALVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVG 214
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
I+ TGST G+K+M AA + KVSLELGG AP IV DADL++AV + ++ N GQ
Sbjct: 215 MISLTGSTEAGQKIMEAAAENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQ 274
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C CA RV V E IY++F + + +K +KVGD F GPL+N+AAL+KVE VE A
Sbjct: 275 VCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERA 334
Query: 272 VSKGAKVLLGGRRHSLGM-TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
V GA +L GG+R FYEPTVL+NV+ +M + +EE+FGPV P++ F + +EAI +
Sbjct: 335 VEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIEL 394
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAP--FGGVKQSGLGREG 388
AND+ GL +YI+T NL R + LE+G +N + E G K+SGLG
Sbjct: 395 ANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRE--NFEAMQGFHAGWKKSGLGGAD 452
Query: 389 SKYGMDEFLEIKYV 402
K+G++E+L+ K V
Sbjct: 453 GKHGLEEYLQTKVV 466
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 441 bits (1136), Expect = e-153
Identities = 176/382 (46%), Positives = 240/382 (62%), Gaps = 8/382 (2%)
Query: 29 LLRE----VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPL 84
L+RE V Y A++ +YA A ++ G +IP D F ++P+GV AITPWN PL
Sbjct: 74 LIRETRAQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPL 133
Query: 85 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDAL 144
++ +K+ PALA G TVV+KPSE TP + L A+LA +AG PPGVVNVV G P+ G+AL
Sbjct: 134 LLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVVNVVTGFGPETGEAL 193
Query: 145 LTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA 204
+ P V KI FTG T G+ + AA + V+LELGG +P IVFDDADL+ AVNG +A
Sbjct: 194 VEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAG 253
Query: 205 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 264
F +GQTCV +R+LVQ IY++F + + ++VGD GPL + LEKV
Sbjct: 254 IFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKV 313
Query: 265 ETFVEDAVSKGAKVLLGGRRHSLGMT----FYEPTVLSNVKSEMLVSREEVFGPVAPLLC 320
E +V A +GA+VL GG R S F+EPT+L++V ++M +++EEVFGPV ++
Sbjct: 314 ERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIP 373
Query: 321 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVK 380
F EEEAI +AND+ GLAA I+T +L R RV+ A+E G V VN + +PFGG K
Sbjct: 374 FDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFK 433
Query: 381 QSGLGREGSKYGMDEFLEIKYV 402
SG+GRE + E+ + K V
Sbjct: 434 DSGIGRENGIEAIREYTQTKSV 455
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 440 bits (1133), Expect = e-153
Identities = 185/383 (48%), Positives = 247/383 (64%), Gaps = 5/383 (1%)
Query: 26 SSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLA 85
+ R++ A F+A+ ++ GE P +VL+QPVGVAG ITPWN PL
Sbjct: 74 TLARTRDIPRAAANFRFFADYILQLDGESYP-QDGGALNYVLRQPVGVAGLITPWNLPLM 132
Query: 86 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALL 145
++T K+ PALA G TVV+KPSE+TPLTA AELA +AG+PPGVVNVV G P+ G AL+
Sbjct: 133 LLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVNVVHGFGPEAGAALV 192
Query: 146 TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAK 205
P V I+FTG TA G+ +M AA +K VSLELGG P IVF DADL+ AV+ A+ +
Sbjct: 193 AHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVFADADLDRAVDAAVRSS 252
Query: 206 FRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVE 265
F N+G+ C+ +R+LVQ IY++F + F + K LKVGD GPLI+K LEKV
Sbjct: 253 FSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVL 312
Query: 266 TFVEDAVSKGAKVLLGGRRHSLGMT----FYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 321
+VE A ++GA +L GG R L F EPTV++ + ++ V++EE+FGPV ++ F
Sbjct: 313 GYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPF 372
Query: 322 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQ 381
EEEAI +ANDT GLAAY++T +L R RV+ LE G V VN L+ PFGGVK
Sbjct: 373 DDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKA 432
Query: 382 SGLGREGSKYGMDEFLEIKYVCL 404
SG+GREG Y ++ + E+K VC+
Sbjct: 433 SGIGREGGDYSLEFYTELKNVCI 455
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 433 bits (1115), Expect = e-150
Identities = 172/372 (46%), Positives = 235/372 (63%), Gaps = 2/372 (0%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
+V K + +YA A ++ G+ IP + + ++P+GV G I PWNFPL M+ K+
Sbjct: 104 DVALSIKCLRYYAGWADKIQGKTIP-IDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKL 162
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PALA G TVV+KP+E TPL+AL AEL +AG PPGVVN+V G P G A+ + V
Sbjct: 163 APALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVD 222
Query: 152 KITFTGSTAVGKKLM-AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 210
KI FTGSTAVG+ +M A A +KKV+LELGG +P IVFDDADL+ AV A F N G
Sbjct: 223 KIAFTGSTAVGRTIMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQG 282
Query: 211 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 270
Q C +R+ VQE IY++F + F + VGD F QGP ++KA +K+ +++E
Sbjct: 283 QCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIES 342
Query: 271 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
+GA +L GG RH F +PTV ++VK +M +++EE+FGPV +L FKTE+E I
Sbjct: 343 GKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIER 402
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 390
ANDT GLAA +FT ++ + RVS AL+ G V VN + PFGG KQSG GRE +
Sbjct: 403 ANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGE 462
Query: 391 YGMDEFLEIKYV 402
G++E+ ++K V
Sbjct: 463 EGLEEYTQVKAV 474
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 421 bits (1085), Expect = e-146
Identities = 172/373 (46%), Positives = 239/373 (64%), Gaps = 5/373 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV + A +R GEI+P+ +P + V + P+GV G I+P+NFPL + R V
Sbjct: 60 EVGAAIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSV 119
Query: 92 GPALACGCTVVVKPSEFTPLT-ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQV 150
PALA G VV+KP TP+T L AE+ +AG+P GV+NVV G +IGDAL+ P+V
Sbjct: 120 APALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHPRV 179
Query: 151 RKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 210
R I+FTGSTAVG+ + A +KKV+LELGGN P IV DDADL++AV+ A F + G
Sbjct: 180 RMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQG 239
Query: 211 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 270
Q C+ A R+LV E +Y++F + K L VGD V GPLIN+ +++V VED
Sbjct: 240 QICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVED 299
Query: 271 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
AV+ GA++L GG L FY+PTVLS+V +M + REE+FGPVAP++ F +EEA+ +
Sbjct: 300 AVAAGARLLTGGTYEGL---FYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVEL 356
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE-VAPFGGVKQSGLGREGS 389
ANDT GL+A +FT +L+R +E LE G+V +N+ ++ E PFGGVK SG GR G
Sbjct: 357 ANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKASGGGRFGG 416
Query: 390 KYGMDEFLEIKYV 402
++EF E +++
Sbjct: 417 PASLEEFTEWQWI 429
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 412 bits (1062), Expect = e-142
Identities = 182/380 (47%), Positives = 244/380 (64%), Gaps = 14/380 (3%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIP----ATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87
EVD + + AEEAKR+ GE IP R F +++P+GV AITP+NFPL ++
Sbjct: 81 EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLV 140
Query: 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTS 147
KVGPA+A G VV+KP+ TPL+AL AEL L+AG+P G +NVV G+ +GDAL+T
Sbjct: 141 AHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTD 200
Query: 148 PQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 207
P+VR I+FTGS AVG+ + A AG +KKV+LELG NA IV DADL AV ++ F
Sbjct: 201 PRVRMISFTGSPAVGEAI-ARKAG-LKKVTLELGSNAAVIVDADADLEKAVERCVSGAFA 258
Query: 208 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 267
N+GQ C+ R+ V E IY++F + F A K L VGD E GP+I++A E++E +
Sbjct: 259 NAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEW 318
Query: 268 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
VE+AV GA++L GG+R EPTVL++V +M V EEVF PV L F T +EA
Sbjct: 319 VEEAVEGGARLLTGGKRDG---AILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEA 375
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST---EVAPFGGVKQSGL 384
I MAND+ GL A +FTN+LQ+ + + LE G V +N+ ST + P+GGVK+SG
Sbjct: 376 IAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMIND--SSTFRVDHMPYGGVKESGT 433
Query: 385 GREGSKYGMDEFLEIKYVCL 404
GREG +Y ++E EIK VC
Sbjct: 434 GREGPRYAIEEMTEIKLVCF 453
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 402 bits (1035), Expect = e-138
Identities = 176/378 (46%), Positives = 243/378 (64%), Gaps = 7/378 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIP----ATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87
EV+ + + AEEAK + GE IP R F +++P+GV GAITP+NFP +
Sbjct: 81 EVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLF 140
Query: 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTS 147
K+ PA+A G +VVVKPS TPLTA+ A++ +AG+PPGV+NVV G ++GD ++T+
Sbjct: 141 AHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTN 200
Query: 148 PQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 207
P+V I+FTGSTAVG + + A GT KKV+LELGG+ P IV DADL AV+ A+ +F
Sbjct: 201 PKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPMIVLKDADLERAVSIAVRGRFE 260
Query: 208 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 267
N+GQ C R+LV+E +Y+KF + VK LKVGD E GPLI+ A+E++E
Sbjct: 261 NAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENL 320
Query: 268 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
V DAV KG K+L GG+R +F+ PTVL N +M+V +EEVFGPV P+ K +EEA
Sbjct: 321 VNDAVEKGGKILYGGKR--DEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEA 378
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE-GLISTEVAPFGGVKQSGLGR 386
+ +AN T GL A +FTN++ R +V+ LE G V +N+ + PFGG K+SG+GR
Sbjct: 379 VEIANSTEYGLQASVFTNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGR 438
Query: 387 EGSKYGMDEFLEIKYVCL 404
EG +Y M E E K + +
Sbjct: 439 EGVRYTMLEMTEEKTIVI 456
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 401 bits (1032), Expect = e-138
Identities = 170/372 (45%), Positives = 242/372 (65%), Gaps = 4/372 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E + + + A E +RV GE +P+ P +++P+GV ITP+N+PL + T+KV
Sbjct: 81 ETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKV 140
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
ALA G TVV+KPSE TP+ L AE+ +AG+P GV NVV G ++GD L+ P+VR
Sbjct: 141 AFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVR 200
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
+TFTGSTAVG+++ A +KK++LELGG P IV DADL+ AV A F + GQ
Sbjct: 201 MVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQ 260
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C+ A+R++V+E +Y++F F LKVGD V GPLI+ +E+++ VEDA
Sbjct: 261 ICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDA 320
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
V+KGAK+L GG+ FY+PTVL++V +M + REE FGPV ++ K EEA+ +A
Sbjct: 321 VAKGAKLLTGGKYDGN---FYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELA 377
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE-VAPFGGVKQSGLGREGSK 390
NDT GL+A I TN+LQR ++++E LE G+V +N+ I E PFGGVK SG GREG +
Sbjct: 378 NDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGE 437
Query: 391 YGMDEFLEIKYV 402
+ M+EF E+K++
Sbjct: 438 WSMEEFTELKWI 449
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 398 bits (1026), Expect = e-137
Identities = 156/369 (42%), Positives = 211/369 (57%), Gaps = 5/369 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV ++ + A E+I RR+ + ++P+GV AI PWNFPL + K+
Sbjct: 79 EVGGAVAWLRYTASLDLPD--EVIEDD-DTRRVELRRKPLGVVAAIVPWNFPLLLAAWKI 135
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PAL G TVV+KPS FTPL L ELA + +PPGV+NVV G ++G AL + P +R
Sbjct: 136 APALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLNVVSGGD-ELGPALTSHPDIR 193
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
KI+FTGSTA GKK+MA AA T+K+V+LELGGN IV D D++ F NSGQ
Sbjct: 194 KISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQ 253
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C R+ V E IY++F +A K VGDG G GP+ NK +KV+ VEDA
Sbjct: 254 VCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDA 313
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
+KGAKVL GG F PT++ + + EE FGPV P+L + E+E I A
Sbjct: 314 KAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARA 373
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
ND+ GL A +++++L+R V+ LE G V +N APFGG KQSG+G E
Sbjct: 374 NDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIE 433
Query: 392 GMDEFLEIK 400
G+ E+ + +
Sbjct: 434 GLKEYTQTQ 442
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 399 bits (1027), Expect = e-136
Identities = 161/375 (42%), Positives = 228/375 (60%), Gaps = 5/375 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
++D A +YA A + GE+ P +++PVGV G ITPWN+PL K+
Sbjct: 97 DIDDVANCFRYYAGLATKETGEVYDVP-PHVISRTVREPVGVCGLITPWNYPLLQAAWKL 155
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PALA G TVV+KPSE TPLT +A EL +AG+P GVVN+V G+ +G L SP V
Sbjct: 156 APALAAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVD 215
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
++FTG TA G+ +M AAG VKKV+LELGG P IVF DAD AV+ AL F N+GQ
Sbjct: 216 LVSFTGGTATGRSIMRAAAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQ 275
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C +R+LV+E I++KF A ++ K +K+G+G GPL++ EKV ++++
Sbjct: 276 VCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLG 335
Query: 272 VSKGAKVLLGGRRHSLGM----TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
+GA+++ GG+R + F EPT+ +V M + +EE+FGPV + F TEEEA
Sbjct: 336 KEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEA 395
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 387
I +ANDT GLA ++T ++ R RV+ L G V +N+ AP+GG KQSG+GRE
Sbjct: 396 IRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRE 455
Query: 388 GSKYGMDEFLEIKYV 402
G++E+ E K++
Sbjct: 456 LGPTGLEEYQETKHI 470
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 395 bits (1018), Expect = e-135
Identities = 149/338 (44%), Positives = 216/338 (63%), Gaps = 4/338 (1%)
Query: 66 VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI 125
V+++P+GV G ITPWN+PL I KV PALA GCTVV+KPSE PL+A+ AE+ +AG+
Sbjct: 126 VVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILDEAGL 185
Query: 126 PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAP 185
P GV N+V G+ P +G+AL P V ++FTGST GK++ AA TVK+V+LELGG +
Sbjct: 186 PAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTVKRVALELGGKSA 245
Query: 186 CIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245
I+ DDADL AV +AA F NSGQ+C R+LV Y + + + A + VGD
Sbjct: 246 NIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDP 305
Query: 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT---FYEPTVLSNVKS 302
GPL + A ++V+ +++ + +GA+++ GG G+ F +PTV ++V
Sbjct: 306 RDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTP 365
Query: 303 EMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLV 362
+M ++REE+FGPV ++ + E+EAI +ANDT GLA Y+++ + +R V+ L G V
Sbjct: 366 DMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQV 425
Query: 363 GVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400
+N + APFGG KQSG GRE +YG++EFLE+K
Sbjct: 426 HINGAAFNPG-APFGGYKQSGNGREWGRYGLEEFLEVK 462
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 388 bits (998), Expect = e-132
Identities = 175/425 (41%), Positives = 246/425 (57%), Gaps = 33/425 (7%)
Query: 3 RVW-----EERKQKMLYLRLLMRLILGASSL-LLREVDYG--------------AKFIEF 42
VW ERK +L L L+ L LL +D G A +
Sbjct: 40 GVWSRLSPAERKAVLLRLADLIEA--HRDELALLETLDMGKPISDALAVDVPSAANTFRW 97
Query: 43 YAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVV 102
YAE +VYGE+ P T PD + ++P+GV GA+ PWNFPL M K+ PALA G +VV
Sbjct: 98 YAEAIDKVYGEVAP-TGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVV 156
Query: 103 VKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 162
+KP+E +PLTAL AELAL+AG+P GV+NVV G G+AL V + FTGST VG
Sbjct: 157 LKPAEQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVG 216
Query: 163 KKLMAGAAGT-VKKVSLELGGNAPCIVFDDA-DLNVAVNGALAAKFRNSGQTCVCANRVL 220
++ + + + +K+V LE GG +P IVF DA DL+ A A A F N G+ C +R+L
Sbjct: 217 RRFLEYSGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLL 276
Query: 221 VQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLL 280
V E I ++F + A + K GD G L+++A +KV ++E ++GA+++
Sbjct: 277 VHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVA 336
Query: 281 GGRRHSL--GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL 338
GG+R G F EPTV V +M ++REE+FGPV ++ F +EEEA+ +AND+ GL
Sbjct: 337 GGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGL 396
Query: 339 AAYIFTNNLQRTWRVSEALEYGLVGVN---EGLISTEVAPFGGVKQSGLGREGSKYGMDE 395
AA ++T++L R RV+ L G V VN EG I+T PFGG KQSG GR+ S + +D+
Sbjct: 397 AASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITT---PFGGFKQSGNGRDKSLHALDK 453
Query: 396 FLEIK 400
+ E+K
Sbjct: 454 YTELK 458
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 387 bits (995), Expect = e-132
Identities = 171/368 (46%), Positives = 238/368 (64%), Gaps = 7/368 (1%)
Query: 41 EFYAEEAKRV---YGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALAC 97
E+YA+ A+++ +P D + V ++PVGV G ITPWNFPL M KV PALA
Sbjct: 88 EYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAA 147
Query: 98 GCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTG 157
GCTVV+KPSE T LT L AE+A +AG+PPGV+NVV G + G L P + KI+FTG
Sbjct: 148 GCTVVLKPSELTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTG 207
Query: 158 STAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCAN 217
STA G ++M AA +K VSLELGG +P IVFDDADL AV A+ F N+GQ C +
Sbjct: 208 STATGSQVMQAAAQDIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATS 267
Query: 218 RVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAK 277
R+LV E I + F + + A + ++VGD EGV GPL+++A EKV +F+ +GA+
Sbjct: 268 RLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGAR 327
Query: 278 VLLGGRRHSLGMT--FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTN 335
+L GGRR + F PTV ++V ++ + REE+FGPV + F TE+EAI +AND+
Sbjct: 328 LLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSE 387
Query: 336 AGLAAYIFTNNLQRTWRVSEALEYGLVGVN-EGLISTEVAPFGGVKQSGLGREGSKYGMD 394
GLAA + + + +R RV+EALE G+V +N + AP+GG K+SG+GRE ++G+D
Sbjct: 388 YGLAAAVISRDAERCDRVAEALEAGIVWINCSQPCFPQ-APWGGYKRSGIGRELGEWGLD 446
Query: 395 EFLEIKYV 402
+LE+K +
Sbjct: 447 NYLEVKQI 454
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 382 bits (984), Expect = e-130
Identities = 157/375 (41%), Positives = 231/375 (61%), Gaps = 8/375 (2%)
Query: 33 VDYGAKFIEFYAEEAKRVYGEII-----PATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87
VD + ++A+ A E P RR+ V ++PVGV AITPWNFP +
Sbjct: 82 VDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRV-VRREPVGVVAAITPWNFPFFLN 140
Query: 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTS 147
K+ PALA G TVV+KP+ TPL+AL E+ + +P GVVNVV G+ +G+AL T
Sbjct: 141 LAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTD 200
Query: 148 PQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 207
P+V ++FTGSTAVG+++MA AA T+K+V LELGG + IV DDADL A A+
Sbjct: 201 PRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMH 260
Query: 208 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 267
N+GQ C R+LV Y++ +A + A + L VGD G V GPLI+ A ++VE +
Sbjct: 261 NAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGY 320
Query: 268 VEDAVSKGAKVLLGGRR-HSLGMTFY-EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325
+ +GA+++ GG R L FY EPT+ ++V ++M +++EE+FGPV ++ + ++
Sbjct: 321 IARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDD 380
Query: 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG 385
EA+ +AND++ GL+ +++ ++ R +RV+ + G VG+N G APFGG KQSGLG
Sbjct: 381 EAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLG 440
Query: 386 REGSKYGMDEFLEIK 400
RE G++EFLE K
Sbjct: 441 RENGIEGLEEFLETK 455
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 379 bits (976), Expect = e-129
Identities = 161/391 (41%), Positives = 226/391 (57%), Gaps = 11/391 (2%)
Query: 18 LMRLILGASSLLLR-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGA 76
M GA++ VD A + A ++ G IP+ P V+K+PVGV
Sbjct: 45 AMMEETGATAAWAGFNVDLAAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLG 104
Query: 77 ITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM-- 134
I PWN P+ + TR + LA G TVV+K SE +P T + +AG+P GV+NVV
Sbjct: 105 IAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHS 164
Query: 135 -GNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD 193
+AP++ +AL+ P VRK+ FTGST VG+ + AA +K V LELGG AP IV +DAD
Sbjct: 165 PEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDAD 224
Query: 194 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 253
L+ A N AL F NSGQ C+ R++V E I ++F + A + L G VV G
Sbjct: 225 LDAAANAALFGAFLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAGP-----VVLG 279
Query: 254 PLINKAALEKVETFVEDAVSKGAKVLLGGR-RHSLGMTFYEPTVLSNVKSEMLVSREEVF 312
L++ AA ++V+ V+DA+SKGAK+++GG S T PT+L NV +M + EE F
Sbjct: 280 SLVSAAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESF 339
Query: 313 GPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE 372
GPV ++ K EEEA+ +AND+ GL+A +FT +L R V++ +E G V +N + E
Sbjct: 340 GPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHDE 399
Query: 373 -VAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402
P GGVK SG GR K+G+DEF E K++
Sbjct: 400 PTLPHGGVKSSGYGRFNGKWGIDEFTETKWI 430
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 377 bits (970), Expect = e-129
Identities = 162/374 (43%), Positives = 214/374 (57%), Gaps = 61/374 (16%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV + A A ++ G +P+ P +V ++P+GV G ITPWNFPL + K+
Sbjct: 54 EVARAIDTFRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKL 113
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PALA G TVV+KPSE TPLTALA AEL +AG+PPGVVNVV G ++G ALL+ P+V
Sbjct: 114 APALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVD 173
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
KI+FTGSTAVGK +M AA +K V+LELGG +P IV +DADL+ AV GA+ F N+GQ
Sbjct: 174 KISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQ 233
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C A+R+LV E IY++F +EK+ T + D
Sbjct: 234 ICTAASRLLVHESIYDEF-------------------------------VEKLVTVLVD- 261
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
V +M +++EE+FGPV P++ FK EEEAI +A
Sbjct: 262 ----------------------------VDPDMPIAQEEIFGPVLPVIRFKDEEEAIALA 293
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSK 390
NDT GL A +FT +L R RV+E L G V +N+ I APFGGVK SG+GREG
Sbjct: 294 NDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGP 353
Query: 391 YGMDEFLEIKYVCL 404
YG++E+ K V +
Sbjct: 354 YGLEEYTRTKTVVI 367
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 379 bits (975), Expect = e-129
Identities = 169/364 (46%), Positives = 232/364 (63%), Gaps = 1/364 (0%)
Query: 41 EFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCT 100
+YA A ++ GE+IP + +++PVGV GAI PWNFPL KV PALA G T
Sbjct: 89 RYYAGWADKIEGEVIPVR-GPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNT 147
Query: 101 VVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTA 160
VV+KP+E TPL+AL AEL +AG P GV+NVV G G AL+ P V KITFTGSTA
Sbjct: 148 VVLKPAELTPLSALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTA 207
Query: 161 VGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL 220
VG+K+M GAAG +K+VSLELGG + IVF DADL+ AV A F N GQ C +R+L
Sbjct: 208 VGRKIMQGAAGNLKRVSLELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLL 267
Query: 221 VQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLL 280
V E IY++F + F+ ++L+ GD GPL+++A ++V +V+ +GA++L
Sbjct: 268 VHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLT 327
Query: 281 GGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAA 340
GG+R F EPT+ + V EM +++EE+FGPV ++ F+ EEEA+ +AN T GLAA
Sbjct: 328 GGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAA 387
Query: 341 YIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400
++T +L R RV+ AL+ G V +N +PFGG KQSG GRE + +DE+ E+K
Sbjct: 388 GVWTRDLGRAHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTEVK 447
Query: 401 YVCL 404
V +
Sbjct: 448 SVWV 451
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 380 bits (977), Expect = e-129
Identities = 167/374 (44%), Positives = 223/374 (59%), Gaps = 6/374 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVL--KQPVGVAGAITPWNFPLAMITR 89
++ K + +YA A +++G+ IP D F +PVGV G I PWNFPL M
Sbjct: 108 DLPGAIKVLRYYAGWADKIHGKTIPM---DGDFFTYTRHEPVGVCGQIIPWNFPLLMAAW 164
Query: 90 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQ 149
K+ PALACG TVV+KP+E TPLTAL A L +AG PPGVVNVV G P G A+ + P
Sbjct: 165 KLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPD 224
Query: 150 VRKITFTGSTAVGKKLM-AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
+ K+ FTGST VGK + A +K+V+LELGG +P IVF DADL+ AV A A F N
Sbjct: 225 IDKVAFTGSTEVGKLIQQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFN 284
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 268
GQ C +R VQE IY++F + K VG+ F QGP I++ +K+ +
Sbjct: 285 MGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELI 344
Query: 269 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 328
E +GAK+ GG+RH F +PTV S+V +M +++EE+FGPV + FKT +E I
Sbjct: 345 ESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVI 404
Query: 329 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREG 388
AN+T GLAA +FT ++ + S AL G V VN + + APFGG K SG GRE
Sbjct: 405 ERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGREL 464
Query: 389 SKYGMDEFLEIKYV 402
+YG+ E+ E+K V
Sbjct: 465 GEYGLQEYTEVKTV 478
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 379 bits (976), Expect = e-129
Identities = 155/364 (42%), Positives = 218/364 (59%), Gaps = 2/364 (0%)
Query: 40 IEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGC 99
F+A A+ + G+ L + + PVGV +I PWN+PL M K+ PALA G
Sbjct: 108 FRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGN 167
Query: 100 TVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGST 159
TVV+KPSE TPLTAL AELA +PPGV+NVV G +GDAL+ P+VR ++ TGS
Sbjct: 168 TVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSI 226
Query: 160 AVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRV 219
A GK +++ AA +VK+ LELGG AP IVFDDADL+ V G + N+GQ C A R+
Sbjct: 227 ATGKHVLSAAADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRI 286
Query: 220 LVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKG-AKV 278
Q GIY+ + AV LKVGD E GPLI+ A ++V FVE A + G +V
Sbjct: 287 YAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRV 346
Query: 279 LLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL 338
+ GG +YEPT+L+ + + + + EVFGPV + F E++A+ AND++ GL
Sbjct: 347 VTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGL 406
Query: 339 AAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLE 398
A+ ++T ++ R RVS L+YG VN + P GG KQSG G++ S YG++++
Sbjct: 407 ASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTV 466
Query: 399 IKYV 402
+++V
Sbjct: 467 VRHV 470
|
Length = 475 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 377 bits (971), Expect = e-128
Identities = 166/371 (44%), Positives = 222/371 (59%), Gaps = 2/371 (0%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ F+A A+ + G LP + ++P+GV I PWN+PL M K+
Sbjct: 80 ELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKI 139
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PALA G TVV+KPSE TPLT L AELA +PPGVVNVV G GDAL+ P+VR
Sbjct: 140 APALAAGNTVVLKPSETTPLTTLLLAELA-AEVLPPGVVNVVCGGGASAGDALVAHPRVR 198
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
++ TGS GKK+ AA T+K+V LELGG AP IVFDDADL+ AV G A + N+GQ
Sbjct: 199 MVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQ 258
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C A RV V E +Y++F A +AV ++VGD E GPL + A E+V FVE A
Sbjct: 259 DCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERA 318
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
A+VL GGRR FYEPTV++ V + + +EE+FGPV + F E+EAI +A
Sbjct: 319 -PAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELA 377
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
ND GLA+ ++T ++ R R+S L++G V VN + P GG KQSG G++ S Y
Sbjct: 378 NDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIY 437
Query: 392 GMDEFLEIKYV 402
++++ IK+V
Sbjct: 438 ALEDYTRIKHV 448
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 374 bits (961), Expect = e-126
Identities = 169/381 (44%), Positives = 235/381 (61%), Gaps = 5/381 (1%)
Query: 26 SSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLA 85
S L ++D I +YA A ++ G+ IP + P++ + L +P GV G I PWN+PLA
Sbjct: 101 HSNALGDLDEIIAVIRYYAGWADKIQGKTIPTS-PNKLAYTLHEPYGVCGQIIPWNYPLA 159
Query: 86 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALL 145
M K+ PALA G TVV+KP+E TPL+ L A L +AG PPGVVN++ G G AL
Sbjct: 160 MAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALA 219
Query: 146 TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAK 205
P V KI FTGSTA G+ +M AA +K V+LE GG +P +VF+DADL+ AV A A
Sbjct: 220 EHPDVDKIAFTGSTATGRLVMKAAAQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGI 279
Query: 206 FRNSGQTCVCANRVLVQEGIYEKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKV 264
NSGQ C +R+ VQE IY+KF + F + VK N KVG F + V GP ++K ++V
Sbjct: 280 MYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRV 339
Query: 265 ETFVEDAVSKGAKVLLGGRRHSLGMT---FYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 321
+++E +GAK++ GG + G+ F PT+ ++V +M + +EE+FGPV + F
Sbjct: 340 LSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKF 399
Query: 322 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQ 381
KT EEAI ANDT GLAA +FT +++R RV+ LE G+V +N S PFGG K
Sbjct: 400 KTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKM 459
Query: 382 SGLGREGSKYGMDEFLEIKYV 402
SG+GRE +YG++ + + K V
Sbjct: 460 SGIGRELGEYGLETYTQTKAV 480
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 373 bits (959), Expect = e-126
Identities = 176/406 (43%), Positives = 251/406 (61%), Gaps = 6/406 (1%)
Query: 1 MYRVWEERKQKMLYLRLLMRLILGASSLLLREVDY--GAKFIEFYAEEAKRVYGEIIPAT 58
+ ++ + ++ + YL + L G + + VD A +Y A +++G++I T
Sbjct: 74 LSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVI-ET 132
Query: 59 LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAE 118
+ + +P+GV G I PWNFPL M K+ PALA G T+V+KPSE TPL+AL +
Sbjct: 133 DIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTK 192
Query: 119 LALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT-VKKVS 177
L +AG PPGV+NVV G G+A+ + + K+ FTGST VG+K+M AA + +KKV+
Sbjct: 193 LIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVT 252
Query: 178 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV 237
LELGG +P IVFDDADL AV F N GQ C +R+ VQEGIY+KF F +
Sbjct: 253 LELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKA 312
Query: 238 KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVL 297
K LKVGD F E QGP +++ E++ +++E ++GA V GG+RH F EPT+
Sbjct: 313 KKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIF 372
Query: 298 SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL 357
++V +M + +EE+FGPV ++ FKTEEEAI AND+ GLAA +FTNN+ RV+ AL
Sbjct: 373 TDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANAL 432
Query: 358 EYGLVGVN-EGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402
+ G V VN L+ +V PFGG KQSG+GRE +Y ++ + +IK V
Sbjct: 433 KAGTVWVNCYNLLHHQV-PFGGYKQSGIGRELGEYALENYTQIKAV 477
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 367 bits (945), Expect = e-124
Identities = 171/380 (45%), Positives = 238/380 (62%), Gaps = 10/380 (2%)
Query: 30 LREVDYGAKFIEFYAEEAKRVYGEIIP----ATLPDRRLFVLKQPVGVAGAITPWNFPLA 85
EVD + AEEA+R+ GE IP +R + +++PVGV AITP+NFPL
Sbjct: 79 RVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLN 138
Query: 86 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALL 145
++ K+ PA+A GC VV+KP+ TPL+AL A++ ++AG+P GV+ VV G +GDA
Sbjct: 139 LVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFA 198
Query: 146 TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAK 205
+V ++FTGS AVG+ L A A G K+++LELGGNAP IV DADL+ A+
Sbjct: 199 ADERVAMLSFTGSAAVGEALRANAGG--KRIALELGGNAPVIVDRDADLDAAIEALAKGG 256
Query: 206 FRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVE 265
F ++GQ C+ R+ V E +Y++F +AF AVK LKVGD E GPLI++ A E+VE
Sbjct: 257 FYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVE 316
Query: 266 TFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325
+VE+AV GA++L GG R ++PTVL +V + +S EE FGPV P++ + E
Sbjct: 317 RWVEEAVEAGARLLCGGERDG---ALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFE 373
Query: 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG-LISTEVAPFGGVKQSGL 384
EAI +AN T+ GL A IFT +L ++ +E LE G V VN+ T+ PFGGVK+SG+
Sbjct: 374 EAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGV 433
Query: 385 GREGSKYGMDEFLEIKYVCL 404
GREG Y M+E E K V +
Sbjct: 434 GREGVPYAMEEMTEEKTVVI 453
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 367 bits (943), Expect = e-124
Identities = 158/372 (42%), Positives = 230/372 (61%), Gaps = 1/372 (0%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E++ A + A A+ ++G+ D VL++P+GV G ITPWNFP ++++K+
Sbjct: 81 EIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKL 140
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
ALA GCTVVVKPSEFT T L AEL ++AG+P GVVN+V G +G A+ P V
Sbjct: 141 PFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVD 200
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
++FTGST VGK + A AA +KKVSLELGG P IVF DADL+ A + + + N+G+
Sbjct: 201 MVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGE 260
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C +R+LV E I + F A + ++VGD G +IN+A L K+ +V+
Sbjct: 261 CCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAG 320
Query: 272 VSKGAKVLLGGRRHSLGM-TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
++GA +LLGG R + FY+PT+ ++V +M ++REE+FGPV +L F T +EAI +
Sbjct: 321 RAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIAL 380
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 390
ANDT GL+A +++ ++ V+ + G V VN L + PFGG KQSG+GRE +
Sbjct: 381 ANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGR 440
Query: 391 YGMDEFLEIKYV 402
YG++E+ E+K V
Sbjct: 441 YGVEEYTELKTV 452
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 365 bits (939), Expect = e-123
Identities = 165/379 (43%), Positives = 223/379 (58%), Gaps = 11/379 (2%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLP-DRRLFVLKQPVGVAGAITPWNFPLAMITRK 90
++D A +E+YA A + GE +P LP + ++P+GV I WN+P+ + + K
Sbjct: 79 DIDSSADCLEYYAGLAPTLSGEHVP--LPGGSFAYTRREPLGVCAGIGAWNYPIQIASWK 136
Query: 91 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQV 150
PALACG +V KPS FTPLTAL AE+ +AG+P GV NVV G + G L P V
Sbjct: 137 SAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFNVVQGGG-ETGQLLCEHPDV 195
Query: 151 RKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 210
K++FTGS GKK+M+ AA +K V+LELGG +P I+FDDADL AVNGA+ A F + G
Sbjct: 196 AKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQG 255
Query: 211 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 270
Q C RV VQ I ++F + + K +++GD E G LI++ LEKV ++E
Sbjct: 256 QVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIES 315
Query: 271 AVSKGAKVLLGGRRHSL-----GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325
A +GAKVL GG R + P VL++ +M + REE+FGPV +L F TEE
Sbjct: 316 AKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEE 375
Query: 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE-GLISTEVAPFGGVKQSGL 384
E I ANDT GLAA +FT +LQR RV L+ G +N + EV PFGG KQSG
Sbjct: 376 EVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNISPVEV-PFGGYKQSGF 434
Query: 385 GREGSKYGMDEFLEIKYVC 403
GRE ++ + ++K V
Sbjct: 435 GRENGTAALEHYTQLKTVY 453
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 363 bits (934), Expect = e-123
Identities = 155/375 (41%), Positives = 232/375 (61%), Gaps = 4/375 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV + +YA EA R+ GE +P+T P + ++P+GV G ITPWNFP+A+ K+
Sbjct: 97 EVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKI 156
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PALA G TVV KP+E TP +A A E+ +AG+P GV N+VMG+ ++G AL+ P V
Sbjct: 157 APALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVD 216
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
++FTGSTAVG+++ A AA +V LE+GG P +V DDADL++AV A+ F ++GQ
Sbjct: 217 AVSFTGSTAVGRRIAAAAAARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQ 276
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C ++R++V EGI+++F +A + K LKVGD EGV GP++++ LEK ++E A
Sbjct: 277 RCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIA 336
Query: 272 VSKGAKVLLGGRRHSLGMT--FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 329
S+GAK++ GG R + P + + V ++M ++REE+FGPVA ++ + +EA+
Sbjct: 337 RSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALA 396
Query: 330 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLG-RE 387
+ANDT GL+A I T +L+ +E G+V VN + PFGG K S G RE
Sbjct: 397 IANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPRE 456
Query: 388 GSKYGMDEFLEIKYV 402
+ ++ + IK V
Sbjct: 457 QGEAALEFYTTIKTV 471
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 362 bits (931), Expect = e-122
Identities = 150/365 (41%), Positives = 222/365 (60%), Gaps = 4/365 (1%)
Query: 40 IEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGC 99
+ +YA A+ E + V ++PVGV AI PWN PL + K+ PALA GC
Sbjct: 107 LRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGC 166
Query: 100 TVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGST 159
TVV+KPS TPL A AE A +AG+PPGVVNVV + ++G+ L+ P V K++FTGST
Sbjct: 167 TVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPADR-EVGEYLVRHPGVDKVSFTGST 225
Query: 160 AVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRV 219
A G+++ A + +V+LELGG + IV DDADL+ AV G + A N+GQ CV R+
Sbjct: 226 AAGRRIAAVCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRI 285
Query: 220 LVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVL 279
LV Y++ +A + AV LKVGD GPL + E+VE ++ ++GA+++
Sbjct: 286 LVPRSRYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLV 345
Query: 280 LGGRR--HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG 337
GG R F EPT+ ++V ++M +++EE+FGPV ++ + E++A+ +AND++ G
Sbjct: 346 TGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYG 405
Query: 338 LAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFL 397
L+ ++T +++R V+ + G VGVN G APFGG KQSG+GREG G+D +L
Sbjct: 406 LSGSVWTADVERGLAVARRIRTGTVGVN-GFRLDFGAPFGGFKQSGIGREGGPEGLDAYL 464
Query: 398 EIKYV 402
E K +
Sbjct: 465 ETKSI 469
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 359 bits (923), Expect = e-121
Identities = 160/381 (41%), Positives = 223/381 (58%), Gaps = 11/381 (2%)
Query: 30 LREVDYGAKFIEFYAEEAKRVYGEIIP----ATLPDRRLFVLKQPVGVAGAITPWNFPLA 85
EV A + F A EA R GE A R++F L++P+GV AITP+N PL
Sbjct: 76 RYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLN 135
Query: 86 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALL 145
+ K+ PA+A +V+KPSE TPL+A+ A+L +AG+PP +++VV G +IGD L+
Sbjct: 136 QVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELI 195
Query: 146 TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAK 205
T P V +TFTG AVGK + A A K+ LELGGN P IV DDADL A A+A
Sbjct: 196 THPDVDLVTFTGGVAVGKAIAATAGY--KRQLLELGGNDPLIVMDDADLERAATLAVAGS 253
Query: 206 FRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVE 265
+ NSGQ C R+LV E + ++F D + L VGD G +I++ A ++E
Sbjct: 254 YANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIE 313
Query: 266 TFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325
VE+A+++GA+VLLG +R Y PTVL +V + + EE FGPVAP++ K +
Sbjct: 314 NRVEEAIAQGARVLLGNQRQG---ALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLD 370
Query: 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL-ISTEVAPFGGVKQSGL 384
EAI ++N T GL++ + TN+L R+ E L+ G V VNE +E++PFGGVK SGL
Sbjct: 371 EAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGL 430
Query: 385 G-REGSKYGMDEFLEIKYVCL 404
G +EG + M E +K L
Sbjct: 431 GGKEGVREAMKEMTNVKTYSL 451
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 357 bits (918), Expect = e-121
Identities = 159/374 (42%), Positives = 233/374 (62%), Gaps = 1/374 (0%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV + A +I++ AE A+R GEII + P + + K+ +GV I PWNFP +I RK+
Sbjct: 33 EVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKM 92
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PAL G T+V+KPSEFTP A+A A++ + G+P GV N+V+G +G L +P+V
Sbjct: 93 APALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVA 152
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
++ TGS + G+K+MA AA + KV LELGG AP IV DDADL++AV + ++ NSGQ
Sbjct: 153 MVSMTGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQ 212
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ-GPLINKAALEKVETFVED 270
C CA RV VQ+GIY++F + +A++ ++ G+ + GPLIN AALE+VE V
Sbjct: 213 VCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVAR 272
Query: 271 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
AV +GA+V LGG+ +Y PT+L +V+ EM + EE FGPV P++ F T EEAI M
Sbjct: 273 AVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAM 332
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 390
AND++ GL + I+T NL + + L++G +N G ++SG+G K
Sbjct: 333 ANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGK 392
Query: 391 YGMDEFLEIKYVCL 404
+G+ E+L+ + V L
Sbjct: 393 HGLHEYLQTQVVYL 406
|
Length = 409 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 359 bits (923), Expect = e-121
Identities = 168/377 (44%), Positives = 237/377 (62%), Gaps = 6/377 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
+V ++ A E +R++GE +P+ LP++ +QP+GV ITPWNFP+A+ + K+
Sbjct: 97 DVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKI 156
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PAL CG TVV KP+E TP AL EL +AG+PPGVVNVV G ++G+AL+ P V
Sbjct: 157 FPALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVD 216
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
++FTGST VG+++ A K+V+LE+GG P IV DDADL++A+ GAL + F +GQ
Sbjct: 217 VVSFTGSTEVGERIGETCARPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQ 276
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C +R++V E +Y++F F + K L+VGDG E GPLIN+A LEKV + E
Sbjct: 277 RCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIG 336
Query: 272 VSKGAKVLLGGRRHSLGMT----FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
+GA +LLGG R + G F EPTV ++V +M +++EE+FGPV L+ + EEA
Sbjct: 337 KEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEA 396
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLG- 385
I +ANDT GL++ I+T ++ + +R LE G+ VN I EV PFGGVK+SG G
Sbjct: 397 IEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGH 456
Query: 386 REGSKYGMDEFLEIKYV 402
RE +D F E K V
Sbjct: 457 REAGTTALDAFTEWKAV 473
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 357 bits (917), Expect = e-120
Identities = 169/367 (46%), Positives = 237/367 (64%), Gaps = 5/367 (1%)
Query: 41 EFYAEEAKRVYG-EIIPATLPDR--RLFVLKQPVGVAGAITPWNFPLAMITRKVGPALAC 97
E+YA+ A+ + + P +LP + +VLK+P+GV G ITPWN+PL M T KV PALA
Sbjct: 119 EYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAA 178
Query: 98 GCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTG 157
GCT V+KPSE +T L A++ + G+PPGV+NVV G + G L + P V KI FTG
Sbjct: 179 GCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTG 238
Query: 158 STAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCAN 217
STA G+K+M AA VK VSLELGG +P IVFDD DL+ AV A+ F +GQ C +
Sbjct: 239 STATGRKIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATS 298
Query: 218 RVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAK 277
R+LV E I +F + K KN+K+ D EG GP++++ EKV F+ A S+GA
Sbjct: 299 RLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGAT 358
Query: 278 VLLGGRR-HSLGMTFY-EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTN 335
+L GG+R L F+ EPT++++V + M + REEVFGPV + F TE+EAI +AND++
Sbjct: 359 ILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSH 418
Query: 336 AGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDE 395
GLA + +N+L+R RVSEA + G+V +N AP+GG+K+SG GRE ++G++
Sbjct: 419 YGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLEN 478
Query: 396 FLEIKYV 402
+L +K V
Sbjct: 479 YLSVKQV 485
|
Length = 503 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 355 bits (914), Expect = e-120
Identities = 153/356 (42%), Positives = 233/356 (65%), Gaps = 5/356 (1%)
Query: 49 RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 108
R+ G I+P+ +P + V ++P+GV G I+PWNFPL + R V PALA G VV+KP+
Sbjct: 109 RMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASD 168
Query: 109 TPLTA-LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167
TP+T L A++ +AG+P GV+NVV+G +IGDA + P R I+FTGST VG+ +
Sbjct: 169 TPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGE 228
Query: 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYE 227
A +KKV+LELGGN P +V +DAD++ AVN A+ KF + GQ C+ NR++V E +Y+
Sbjct: 229 LAGRHLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYD 288
Query: 228 KFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL 287
+F + F + VK L GD V GPLIN++ ++ + +E AV +GA +L+GG
Sbjct: 289 EFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEAEGN 348
Query: 288 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 347
+ EPTVLS+V ++M ++REE+FGPVAP++ EEEA+ +ANDT GL+ +FT++L
Sbjct: 349 VL---EPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDL 405
Query: 348 QRTWRVSEALEYGLVGVNEGLISTE-VAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402
+R + + ++ G+ +N+ ++ E PFGG K SGLGR ++ ++EF K++
Sbjct: 406 ERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWI 461
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 353 bits (907), Expect = e-118
Identities = 163/372 (43%), Positives = 232/372 (62%), Gaps = 2/372 (0%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV A+ +YA A +++G +PA P ++ L +P+GV G I PWNFPL M KV
Sbjct: 104 EVPLAARLFRYYAGWADKIHGMTLPADGP-HHVYTLHEPIGVVGQIIPWNFPLLMFAWKV 162
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALACG T+V+KP+E TPL+AL AA+LA +AG+P GV+N+V G P G A+ + V
Sbjct: 163 GPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVD 222
Query: 152 KITFTGSTAVGKKLMAGAAGT-VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 210
K+ FTGST VGK +M AA + +K V+LELGG +P IV +DAD++ AV A A F N G
Sbjct: 223 KVAFTGSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQG 282
Query: 211 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 270
Q C +R V E IY++F + VGD F +GV QGP ++K EK+ +++E
Sbjct: 283 QCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEH 342
Query: 271 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
+GA ++ GG R + +PT+ S+VK +M ++R+E+FGPV +L FKT +E I
Sbjct: 343 GKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKR 402
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 390
AN++ GLAA +F+ N+ +S AL+ G V VN + PFGG K SG+GRE
Sbjct: 403 ANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGI 462
Query: 391 YGMDEFLEIKYV 402
Y ++ +L++K V
Sbjct: 463 YALNNYLQVKAV 474
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 352 bits (905), Expect = e-118
Identities = 158/378 (41%), Positives = 222/378 (58%), Gaps = 12/378 (3%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
+V+ A++ E+Y A +++GE IP P ++ +++P GV G I PWN+PL + R V
Sbjct: 80 DVEAAARYFEYYGGAADKLHGETIPL-GPGYFVYTVREPHGVTGHIIPWNYPLQITGRSV 138
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PALA G VVVKP+E PLTAL AELA +AG+P G +NVV G + G AL+ P V
Sbjct: 139 APALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVD 198
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
I+FTGS G +M AA V V+LELGG +P IVF DADL A+ + A +N+GQ
Sbjct: 199 HISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQ 258
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TC +R+LV IY++ + + + L+VG G E GPLI+ L++VE FV A
Sbjct: 259 TCSAGSRLLVHRSIYDEVLERLVERFRALRVGPG-LEDPDLGPLISAKQLDRVEGFVARA 317
Query: 272 VSKGAKVLLGGRR---HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 328
++GA+++ GGR G F PT+L +V + +++EE+FGPV ++ F E EAI
Sbjct: 318 RARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAI 377
Query: 329 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE----GLISTEVAPFGGVKQSGL 384
+AN T+ GL A ++T + R RV+ L G V VN G I PFGGVK+SG
Sbjct: 378 ALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYGAGGGIEL---PFGGVKKSGH 434
Query: 385 GREGSKYGMDEFLEIKYV 402
GRE + + + K V
Sbjct: 435 GREKGLEALYNYTQTKTV 452
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 351 bits (903), Expect = e-118
Identities = 157/377 (41%), Positives = 223/377 (59%), Gaps = 10/377 (2%)
Query: 36 GAKFIEFYAEEAK-RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 94
A+ F+A++ + + G P + ++ PVG G ITPWN P + T K+ PA
Sbjct: 102 AAENFRFFADKCEEAMDGRTYPV--DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPA 159
Query: 95 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKIT 154
LA G TVV+KP+E++PLTA AE+A +AG+P GV N+V G + G AL+ P V+ ++
Sbjct: 160 LAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVS 219
Query: 155 FTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCV 214
FTG TA G +M A T+K+ S+ELGG +P IVFDDADL A++ + F +G+ C
Sbjct: 220 FTGETATGSIIMRNGADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCT 279
Query: 215 CANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK 274
++R+LVQE I E F + + V+ ++VG GPLI+ L KV +VE A +
Sbjct: 280 ASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKE 339
Query: 275 GAKVLLGGRRHSL-------GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
GA +L+GG R + PTV + + M +++EE+FGPV ++ FK EEEA
Sbjct: 340 GATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEA 399
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 387
I ANDT GLA Y++TN++ R RV+ ALE G++ VN + PFGGVK SG+GRE
Sbjct: 400 IEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGRE 459
Query: 388 GSKYGMDEFLEIKYVCL 404
G Y D + E K V L
Sbjct: 460 GGTYSFDFYTETKNVAL 476
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 350 bits (899), Expect = e-117
Identities = 164/373 (43%), Positives = 227/373 (60%), Gaps = 5/373 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
++D GA EF+A A + GEIIP P + +++P+GV I WN+PL + + K+
Sbjct: 96 DMDSGADVFEFFAGLAPALNGEIIPLGGPSF-AYTIREPLGVCVGIGAWNYPLQIASWKI 154
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PALA G +V KPSE TPLTAL AE+ +AG+P GV NVV G+ ++G L+ P V
Sbjct: 155 APALAAGNAMVFKPSENTPLTALKVAEIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVA 214
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
K++FTG GKK+MA AAG +K V++ELGG +P IVFDDADL AV+GA+ F ++GQ
Sbjct: 215 KVSFTGGVPTGKKIMAAAAGHLKHVTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQ 274
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C RV V + I E+F + + +K+GD F E GPLI+ A +KV +++E
Sbjct: 275 VCSNGTRVFVHKKIKERFLARLVERTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKG 334
Query: 272 VSKGAKVLLGGRR---HSLGM-TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
++GA + GG R L F EPTV ++ +M + REE+FGPV +L F E+E
Sbjct: 335 KAEGATLATGGGRPENVGLQNGFFVEPTVFADCTDDMTIVREEIFGPVMTVLTFSDEDEV 394
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 387
I ANDT GLA +FT +L R RV++ LE G V +N + APFGG KQSG+GRE
Sbjct: 395 IARANDTEYGLAGGVFTADLGRAHRVADQLEAGTVWINTYNLYPAEAPFGGYKQSGIGRE 454
Query: 388 GSKYGMDEFLEIK 400
K + + E+K
Sbjct: 455 NGKAALAHYTEVK 467
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 348 bits (895), Expect = e-117
Identities = 153/376 (40%), Positives = 220/376 (58%), Gaps = 15/376 (3%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIP----ATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87
EV AEEA R+YGE++P A R+ V + P+G AITP+NFPL ++
Sbjct: 81 EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLV 140
Query: 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTS 147
KV PA+A GC V+KP+ TPL+AL E+ + G+P G +V+ + D D L+T
Sbjct: 141 AHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPKGAFSVLPCSRDD-ADLLVTD 199
Query: 148 PQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 207
+++ ++FTGS AVG L A AG KKV LELGGNA IV DADL+ A + F
Sbjct: 200 ERIKLLSFTGSPAVGWDLKA-RAGK-KKVVLELGGNAAVIVDSDADLDFAAQRIIFGAFY 257
Query: 208 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 267
+GQ+C+ RVLV +Y++F VK LK GD + GP+I+++ E+VE +
Sbjct: 258 QAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGW 317
Query: 268 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
V +AV GAK+L GG+R EPT+L +V +M V+ EEVFGPV + + +EA
Sbjct: 318 VNEAVDAGAKLLTGGKRDG---ALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEA 374
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST---EVAPFGGVKQSGL 384
+ ND+ GL A +FT +L++ R + LE G V +N+ + T + P+GGVK SG+
Sbjct: 375 LAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVIND--VPTFRVDHMPYGGVKDSGI 432
Query: 385 GREGSKYGMDEFLEIK 400
GREG +Y ++E E +
Sbjct: 433 GREGVRYAIEEMTEPR 448
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 343 bits (882), Expect = e-115
Identities = 155/378 (41%), Positives = 220/378 (58%), Gaps = 16/378 (4%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRL-------FVLKQPVGVAGAITPWNFPL 84
EV+ A +YAE A A L D + +V +P+GV I PWNFP
Sbjct: 59 EVEKCAWICRYYAENA--------EAFLADEPIETDAGKAYVRYEPLGVVLGIMPWNFPF 110
Query: 85 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDAL 144
+ R P L G TV++K + P ALA EL +AG P GV ++ ++ + +A+
Sbjct: 111 WQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQV-EAI 169
Query: 145 LTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA 204
+ P+VR +T TGS G+ + A A +KK LELGG+ P IV DDADL+ AV A+
Sbjct: 170 IADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKG 229
Query: 205 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 264
+ +N+GQ+C+ A R +V E +Y++F + F +A+ LKVGD E GPL K +++
Sbjct: 230 RLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDEL 289
Query: 265 ETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324
VE+AV+ GA +LLGG+R FY PTVL++V M EE+FGPVA ++ K E
Sbjct: 290 HEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDE 349
Query: 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGL 384
EEAI +AND+ GL +FT +L+R RV+ LE G+V +N + S PFGGVK+SG
Sbjct: 350 EEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGY 409
Query: 385 GREGSKYGMDEFLEIKYV 402
GRE ++G+ EF+ IK V
Sbjct: 410 GRELGRFGIREFVNIKTV 427
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 342 bits (880), Expect = e-115
Identities = 150/377 (39%), Positives = 218/377 (57%), Gaps = 5/377 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ + +YA A+ G +I P VL++P+GVAG I PWN P+ ++ R +
Sbjct: 80 EISGAISELRYYAGLARTEAGRMIEPE-PGSFSLVLREPMGVAGIIVPWNSPVVLLVRSL 138
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAE-LALQAGIPPGVVNVVMGNAPDIGDALLTSPQV 150
PALA GCTVVVKP+ T A LA +P GVVN+ + + L+ SP V
Sbjct: 139 APALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDV 198
Query: 151 RKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 210
I+FTGSTA G+ +MA AA T+K++ LELGG PCIVFDDADL+ A+ A +G
Sbjct: 199 DVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAG 258
Query: 211 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 270
Q C+ +RVLVQ I ++ D + + +KVG G GPLI++A +++V+ VE
Sbjct: 259 QFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVER 318
Query: 271 AVSKGAKVLLGGRRHSLGMT---FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
A++ GA+V+L G + G+ F PT+L + + +EE+FGPV L F E EA
Sbjct: 319 AIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEA 378
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 387
+ +ANDT+ GLAA ++T +L R RV+ A+ G V +N+ A GG +QSGLGR
Sbjct: 379 VALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRL 438
Query: 388 GSKYGMDEFLEIKYVCL 404
+++F+E K++ L
Sbjct: 439 HGVAALEDFIEYKHIYL 455
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 341 bits (876), Expect = e-113
Identities = 163/370 (44%), Positives = 232/370 (62%), Gaps = 6/370 (1%)
Query: 36 GAKFIEFYAEEAKRVYGEIIPATLPDRRL--FVLKQPVGVAGAITPWNFPLAMITRKVGP 93
A + +YA A +++GE + + R+L + LK+P+GV G I PWNFP M KV P
Sbjct: 125 AAGLLRYYAGAADKIHGETLKMS---RQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAP 181
Query: 94 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKI 153
ALA GCT+VVKP+E TPL+AL A LA AG+P GV+NVV G P G A+ + V K+
Sbjct: 182 ALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKV 241
Query: 154 TFTGSTAVGKKLM-AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQT 212
+FTGST VG+K+M A A +K+VSLELGG +P ++FDDAD+++AV+ AL F N G+
Sbjct: 242 SFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEI 301
Query: 213 CVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 272
CV ++RV VQEGIY++F + K+ VGD F QGP ++K EK+ +++E
Sbjct: 302 CVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGK 361
Query: 273 SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 332
+GA +L GG+ + EPT+ ++V +M ++++E+FGPV L+ FKT EEAI AN
Sbjct: 362 REGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKAN 421
Query: 333 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYG 392
+T GLAA I T +L VS ++ G + VN PFGG K SG GR+
Sbjct: 422 NTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDA 481
Query: 393 MDEFLEIKYV 402
+D++L++K V
Sbjct: 482 LDKYLQVKSV 491
|
Length = 501 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 338 bits (868), Expect = e-113
Identities = 156/376 (41%), Positives = 211/376 (56%), Gaps = 7/376 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYG-EIIP--ATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88
EV + I++ A A RV +P +P+++ V +P GV G I+PWN+PL
Sbjct: 78 EVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPM 137
Query: 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSP 148
+ PALA G VV+KPSE TPL AE AG P GV+ VV G+ G AL+ +
Sbjct: 138 GDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQGVLQVVTGDGA-TGAALIDAG 196
Query: 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
V K+ FTGS A G+K+MA AA + V LELGG P IV DADL A A+ N
Sbjct: 197 -VDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVN 255
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 268
+GQTC+ RV V E +Y++F + L+ G GP+ L+ V V
Sbjct: 256 AGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHV 315
Query: 269 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 328
+DAV+KGAK L GG R + G FYEPTVL++V +M V REE FGPV P++ E+EAI
Sbjct: 316 DDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAI 375
Query: 329 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV--APFGGVKQSGLGR 386
+AND+ GL+A +F+ +L R ++ LE G V +N+ L++ + PFGGVK SG GR
Sbjct: 376 ALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGR 435
Query: 387 EGSKYGMDEFLEIKYV 402
G+ EF K +
Sbjct: 436 RHGAEGLREFCRPKAI 451
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 337 bits (867), Expect = e-112
Identities = 142/356 (39%), Positives = 207/356 (58%), Gaps = 10/356 (2%)
Query: 41 EFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCT 100
++ ++ +YG IP+ P RL P+GV G IT +NFP+A+ AL CG T
Sbjct: 104 DYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNT 163
Query: 101 VVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFT 156
VV KPSE TPLTA+A ++ + G+PPGVVN+V G D G+ L+ P+V ++FT
Sbjct: 164 VVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGG-DGGELLVHDPRVPLVSFT 222
Query: 157 GSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCA 216
GST VG+++ A +V LELGGN IV DDADL++AV L A +GQ C
Sbjct: 223 GSTEVGRRVGETVARRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTT 282
Query: 217 NRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGA 276
R++V E +Y++F + KA K +++GD EG + GPLIN+AA+EK +E A S+G
Sbjct: 283 RRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGG 342
Query: 277 KVLLGGRR--HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT 334
VL GG+R + EPT+++ V + + +EE F P+ ++ F + EEAI + ND
Sbjct: 343 TVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDV 402
Query: 335 NAGLAAYIFTNNLQR--TWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGRE 387
GL++ IFT +L+ W + + G+V VN E+ FGG K++G GRE
Sbjct: 403 PQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRE 458
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 337 bits (867), Expect = e-112
Identities = 154/352 (43%), Positives = 199/352 (56%), Gaps = 16/352 (4%)
Query: 49 RVYGEIIPATLPDRR----------LFVLKQPVGVAGAITPWNFPLAMITRKVGPALACG 98
R Y P L RR L+QP GV G I+PWN+PL + PAL G
Sbjct: 123 RYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAG 182
Query: 99 CTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGS 158
VV+KP TPLTALAA EL +AG+P + VV G P +G AL+ + FTGS
Sbjct: 183 NAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALV--DNADYLMFTGS 240
Query: 159 TAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANR 218
TA G+ L A + SLELGG P IV DDADL+ A GA+ A F N+GQ C+ R
Sbjct: 241 TATGRVLAEQAGRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIER 300
Query: 219 VLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKV 278
+ V E IY++F AF AV+ +++G G+ G LI++A LE V V+DAV+KGA V
Sbjct: 301 IYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATV 360
Query: 279 LLGGR-RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG 337
L GG+ R LG FYEPTVL+ V +M ++REE FGPV + +EA+ ANDT G
Sbjct: 361 LAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYG 420
Query: 338 LAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST---EVAPFGGVKQSGLGR 386
L A ++T + R ++ + G V VNEG + AP GG+K SGLGR
Sbjct: 421 LNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGR 472
|
Length = 524 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 335 bits (862), Expect = e-111
Identities = 156/381 (40%), Positives = 218/381 (57%), Gaps = 16/381 (4%)
Query: 36 GAKFIEFYAEEAKRVYGEIIPATLPD----RRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
GA +E+YA A + GE IP RR +P+GV I WN+P+ + K
Sbjct: 109 GADVLEYYAGLAPALEGEQIPLRGGSFVYTRR-----EPLGVCAGIGAWNYPIQIACWKS 163
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PALA G ++ KPSE TPLTAL AE+ +AG+P GV NVV G+ +G L P +
Sbjct: 164 APALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDG-RVGAWLTEHPDIA 222
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
K++FTG GKK+MA AA ++K+V++ELGG +P IVFDDADL+ A + A+ A F +SGQ
Sbjct: 223 KVSFTGGVPTGKKVMAAAAASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQ 282
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C RV VQ+ I F + V+ +++GD GPL++ A +KV ++E
Sbjct: 283 VCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKG 342
Query: 272 VSKGAKVLLGGRRHSLGM----TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
++GA++L GG R + G F PTV ++ +M + REE+FGPV +L F E+E
Sbjct: 343 KAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEV 402
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 387
I ANDT GLAA +FT +L R RV LE G+ +N S P GG KQSG+GRE
Sbjct: 403 IARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRE 462
Query: 388 GSKYGMDEFLEIK--YVCLGD 406
++ + +IK V +G
Sbjct: 463 NGIATLEHYTQIKSVQVEMGP 483
|
Length = 488 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 333 bits (855), Expect = e-111
Identities = 147/378 (38%), Positives = 218/378 (57%), Gaps = 6/378 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRR-----LFVLKQPVGVAGAITPWNFPLAM 86
EV A F+ ++A A ++ GE + ++P + F ++PVGV I PWNF + +
Sbjct: 99 EVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMI 158
Query: 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLT 146
K+G ALA GCT+V+KPSEFTPLT L AELA +AGIP GV+NVV G +G L++
Sbjct: 159 AVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKG-AVGAQLIS 217
Query: 147 SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKF 206
P V K++FTGS A GKK+ AA + +V+LELGG DAD++ V G L A F
Sbjct: 218 HPDVAKVSFTGSVATGKKIGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGF 277
Query: 207 RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVET 266
+ GQ C R V +++ +A+ + +VG E V+ GPL N+ +KV +
Sbjct: 278 LHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCS 337
Query: 267 FVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326
+++DA ++G +++ GG + F +PT++ ++ + REE FGPV + ++ EEE
Sbjct: 338 YLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEE 397
Query: 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGR 386
I + NDT GL A ++TNNL + R +E G V VN PFGG+KQSG+GR
Sbjct: 398 LIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGR 457
Query: 387 EGSKYGMDEFLEIKYVCL 404
E +D++ E+K V +
Sbjct: 458 EFGSAFIDDYTELKSVMI 475
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 328 bits (844), Expect = e-109
Identities = 152/374 (40%), Positives = 217/374 (58%), Gaps = 8/374 (2%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV + A + GEI+P+ P R + P+GV G I+P+NFPL + R V
Sbjct: 73 EVGAAIGELHEAAGLPTQPQGEILPSA-PGRLSLARRVPLGVVGVISPFNFPLILAMRSV 131
Query: 92 GPALACGCTVVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQV 150
PALA G VV+KP TP++ + A L +AG+P GV++V+ G D G+AL+ P V
Sbjct: 132 APALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPG-GADAGEALVEDPNV 190
Query: 151 RKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 210
I+FTGSTAVG+K+ A +KKVSLELGG IV DDADL++A + F + G
Sbjct: 191 AMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAASNGAWGAFLHQG 250
Query: 211 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 270
Q C+ A R LV E + + + + K+L VGD V GPLIN L++V V+D
Sbjct: 251 QICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDD 310
Query: 271 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
+V+ GA++ GG L FY PTVLS VK M EE+FGPVAP+ F ++EEA+ +
Sbjct: 311 SVAAGARLEAGGTYDGL---FYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVAL 367
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE-VAPFGGVKQSGLG-REG 388
ANDT GL+A I + ++ R +++ L G++ +N+ ++ E PFGG+ SG G R G
Sbjct: 368 ANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHNPFGGMGASGNGSRFG 427
Query: 389 SKYGMDEFLEIKYV 402
+EF + ++V
Sbjct: 428 GPANWEEFTQWQWV 441
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 329 bits (844), Expect = e-108
Identities = 167/373 (44%), Positives = 233/373 (62%), Gaps = 4/373 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ A+ +YA A +++G +PA P + L +P+GVAG I PWNFPL M KV
Sbjct: 158 ELPMFARLFRYYAGWADKIHGLTVPADGP-HHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 216
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALACG T+V+K +E TPL+AL AA+L +AG+PPGV+NVV G P G AL + V
Sbjct: 217 GPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVD 276
Query: 152 KITFTGSTAVGKKLMAGAAGT-VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 210
K+ FTGST GK ++ AA + +K V+LELGG +P IV +DAD++ AV A A F N G
Sbjct: 277 KLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQG 336
Query: 211 QTCVCANRVLVQEGIYEKFAD-AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 269
Q C +R V E +Y++F + A ++A+K + VGD F +GV QGP I+ EK+ +++
Sbjct: 337 QCCCAGSRTFVHERVYDEFVEKAKARALKRV-VGDPFKKGVEQGPQIDSEQFEKILRYIK 395
Query: 270 DAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 329
V GA + GG R + +PTV SNV+ +ML++++E+FGPV +L FK +E I
Sbjct: 396 SGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIR 455
Query: 330 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGS 389
AN+T GLAA +FT NL +S AL G V VN + PFGG K SG+GRE
Sbjct: 456 RANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKG 515
Query: 390 KYGMDEFLEIKYV 402
Y ++ +L++K V
Sbjct: 516 IYSLNNYLQVKAV 528
|
Length = 538 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 323 bits (830), Expect = e-107
Identities = 144/341 (42%), Positives = 198/341 (58%), Gaps = 6/341 (1%)
Query: 66 VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI 125
V ++P GV G I+PWN+PL + PAL G VV+KP T LTAL A EL ++AG+
Sbjct: 114 VNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEAGL 173
Query: 126 PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAP 185
P + VV G ++G A++ + FTGSTA G+ + A + SLELGG P
Sbjct: 174 PRDLWQVVTGPGSEVGGAIVD--NADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNP 231
Query: 186 CIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245
IV +DADL+ A GA+ A F N+GQ CV R+ V E +Y++F F + L++G
Sbjct: 232 MIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAA 291
Query: 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR-RHSLGMTFYEPTVLSNVKSEM 304
G G LI++A L++V V+DAV+KGA VL GGR R LG FYEPTVL+ V +M
Sbjct: 292 LDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDM 351
Query: 305 LVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGV 364
+ EE FGPV + ++EAI +ANDT+ GL A ++T + R R++ L G V V
Sbjct: 352 ELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVNV 411
Query: 365 NEGLISTEV---APFGGVKQSGLGREGSKYGMDEFLEIKYV 402
NEG + AP GG+K SGLGR G+ ++ E + V
Sbjct: 412 NEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTV 452
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 322 bits (827), Expect = e-106
Identities = 154/378 (40%), Positives = 208/378 (55%), Gaps = 9/378 (2%)
Query: 36 GAKFIEFYAEEAKRVYGEIIPATLPDRRL---FVLKQPVGVAGAITPWNFPLAMITRKVG 92
GA +A+ K E PD + + +++P+GV G I+PWN PL ++T KVG
Sbjct: 102 GAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVG 161
Query: 93 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTS-PQVR 151
PALACG TVVVKPSE TP TA E+ G+P GV NVV G PD LT P V
Sbjct: 162 PALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVD 221
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
ITFTG T G +M AA VK VS ELGG IVF D D + AV G L + F N+GQ
Sbjct: 222 AITFTGETRTGSAIMKAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQ 281
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C+ RV V+ I+++F A ++LK+G GPLI+ +KV ++ A
Sbjct: 282 VCLGTERVYVERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALA 341
Query: 272 VSKGAKVLLGGRRHSLGM-----TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326
V +GA V+ GG G + +PT+ + + V EE+FGP + F +EEE
Sbjct: 342 VEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEE 401
Query: 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGR 386
I +ANDT GLAA ++T +L R RV+ +E G+V VN + PFGG K SG+GR
Sbjct: 402 VIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGR 461
Query: 387 EGSKYGMDEFLEIKYVCL 404
EG + ++ + E+ VC+
Sbjct: 462 EGGVHSLEFYTELTNVCI 479
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 317 bits (815), Expect = e-105
Identities = 159/378 (42%), Positives = 219/378 (57%), Gaps = 9/378 (2%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E A ++ A + GE +P PD + +++P+GV GAI PWN PL + K+
Sbjct: 80 EAAVLADLFRYFGGLAGELKGETLPFG-PDVLTYTVREPLGVVGAILPWNAPLMLAALKI 138
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PAL G TVV+K +E PL L AE+ L +P GV+NV+ G + G AL+ P V
Sbjct: 139 APALVAGNTVVLKAAEDAPLAVLLLAEI-LAQVLPAGVLNVITGYGEECGAALVDHPDVD 197
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA-KFRNSG 210
K+TFTGST VGK + AA + VSLELGG +P IVF DADL+ AV+GA+A +F G
Sbjct: 198 KVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQG 257
Query: 211 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 270
Q+C +R+ V E IY+ F + + LK+GD E G +I++ KV +++
Sbjct: 258 QSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDL 317
Query: 271 AVS-KGAKVLLGGRRHSLGMT----FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325
+S GA VL GG G F +PT+ S V +E ++REE+FGPV + +K E+
Sbjct: 318 GLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDED 377
Query: 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG 385
E I MAND++ GLAAY++T +L R R + ALE G V VN+G +GG KQSGLG
Sbjct: 378 EVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLG 437
Query: 386 REGSKYGM-DEFLEIKYV 402
RE S GM + F + K V
Sbjct: 438 REASLEGMLEHFTQKKTV 455
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 317 bits (814), Expect = e-104
Identities = 149/330 (45%), Positives = 211/330 (63%), Gaps = 1/330 (0%)
Query: 69 QPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPG 128
+PVGV G I PWNFPL M+ K+ PALA G TVV+KP+E+TPLTAL AE+ +AG+PPG
Sbjct: 146 KPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPG 205
Query: 129 VVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIV 188
V+N+V GN G AL P V K+ FTGST VG+ L AGT KK+SLELGG +P IV
Sbjct: 206 VLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVGRALRRATAGTGKKLSLELGGKSPFIV 264
Query: 189 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 248
FDDADL+ AV G + A + N GQ C +R+LVQE + E+ + + +L+VGD +
Sbjct: 265 FDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDK 324
Query: 249 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSR 308
+ G +++ A L+++ VE+ ++GA V G FY PT+ +NV +++
Sbjct: 325 AIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQ 384
Query: 309 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 368
EE+FGPV +L F+T +EA+ +AN+T GLAA +++ NL V+ +L+ G+V +N
Sbjct: 385 EEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHN 444
Query: 369 ISTEVAPFGGVKQSGLGREGSKYGMDEFLE 398
+ A FGG ++SG GREG K G+ E+L
Sbjct: 445 LFDAAAGFGGYRESGFGREGGKEGLYEYLR 474
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 314 bits (806), Expect = e-103
Identities = 141/345 (40%), Positives = 202/345 (58%), Gaps = 10/345 (2%)
Query: 65 FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG 124
+ +P+GV G I PWNFPL M K+ PALA G TVV+KP+ TPL+ L EL +
Sbjct: 131 YHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMEL-IGDL 189
Query: 125 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNA 184
+P GVVNVV G + G L + P++ K+ FTGST VG+ +M AA + V+LELGG +
Sbjct: 190 LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLIPVTLELGGKS 249
Query: 185 PCIVFDDA-----DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN 239
P I FDDA D + N G+ C C +R LVQE IY++F + + +
Sbjct: 250 PNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEA 309
Query: 240 LKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT----FYEPT 295
+KVG+ + G ++K LEK+ ++V+ +GA+VL GG R +LG FYEPT
Sbjct: 310 IKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPT 369
Query: 296 VLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE 355
++ ++M + +EE+FGPV ++ FK EEEAI +ANDT GL ++T ++ R RV+
Sbjct: 370 LIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVAR 429
Query: 356 ALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400
++ G V VN APFGG K+SG+GRE K +D + + K
Sbjct: 430 GIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTK 474
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 312 bits (800), Expect = e-102
Identities = 144/367 (39%), Positives = 222/367 (60%), Gaps = 6/367 (1%)
Query: 42 FYAEEAKRVYGEIIPAT--LPDRRL-FVLKQPVGVAGAITPWNFPLAMITRKVGPALACG 98
++A ++ G+ IP P+R L ++P+GV G + PWN+PL M+ K+ LA G
Sbjct: 116 YFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAG 175
Query: 99 CTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGS 158
TVV+KP++ TPLTAL AEL ++AG P GV+N++ G+ +G L P VRK+ FTGS
Sbjct: 176 NTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGS 235
Query: 159 TAVGKKLMAGAA-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCAN 217
T +GK +M A +KKVSLELGG +P I+F D D++ AV +++ F N G+ C+ A
Sbjct: 236 TPIGKHIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAG 295
Query: 218 RVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAK 277
R+ V+E I+++F + VK +K+GD GP +KA L+K+ + E V +GA
Sbjct: 296 RLFVEESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGAT 355
Query: 278 VLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EEAIHMANDTN 335
++ GG++ F+EPTV ++V+ M +++EE FGP+ + F + + ANDT
Sbjct: 356 LVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTE 415
Query: 336 AGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDE 395
GLA+ +FT ++ + VS+ LE G V VN + APFGG KQSG G++ + ++E
Sbjct: 416 YGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNE 475
Query: 396 FLEIKYV 402
+L+ K V
Sbjct: 476 YLKTKTV 482
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 307 bits (787), Expect = e-100
Identities = 146/339 (43%), Positives = 208/339 (61%), Gaps = 5/339 (1%)
Query: 66 VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI 125
VL++P+GV G I PWNFP M K+ PALA G TVV+KPS T L+ L A++ +Q +
Sbjct: 132 VLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKI-IQDVL 190
Query: 126 PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAP 185
P GVVN+V G G+ LL P + K+ FTGST VG+ + AA + +LELGG +
Sbjct: 191 PKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLIPATLELGGKSA 250
Query: 186 CIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245
I+FDDA+ + A+ GA N GQ C +R+ VQEGIY++F + +N+KVG+
Sbjct: 251 NIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNP 310
Query: 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT----FYEPTVLSNVK 301
G +NK L+K+ ++V+ A +GAK+L GG R + F EPT++ NV
Sbjct: 311 LDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVT 370
Query: 302 SEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGL 361
++M V++EE+FGPVA ++ FKTE+E I MAND+ GL +FT ++ R RV+ A+E G
Sbjct: 371 NDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETGR 430
Query: 362 VGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400
V VN APFGG K+SG+GRE K +D + ++K
Sbjct: 431 VWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMK 469
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 302 bits (777), Expect = 5e-99
Identities = 149/394 (37%), Positives = 210/394 (53%), Gaps = 17/394 (4%)
Query: 6 EERKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLF 65
+E K+++ LLM I L+EVD +I EE KR+ G+ +P
Sbjct: 75 KENKEEVA--NLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKG 132
Query: 66 VL----KQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL 121
+ ++P+GV AI P+N+PL + K+ PAL G TVV KP+ L + AE
Sbjct: 133 KIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFH 192
Query: 122 QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG 181
AG P GVVNVV G +IGD L+T ++ I+FTGST VG +L +K++ LELG
Sbjct: 193 DAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKK--QHPMKRLVLELG 250
Query: 182 GNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 241
G P IV DADL +A + SGQ C RVLV E + ++ + + V LK
Sbjct: 251 GKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLK 310
Query: 242 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVK 301
VG + GV PLI+ + + VE ++DAV+KGA VL GG R G PT+L V
Sbjct: 311 VGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGR--EGGNLIYPTLLDPVT 368
Query: 302 SEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGL 361
+M ++ EE FGPV P++ EEAI +AN +N GL A IFT ++ + ++++ALE G
Sbjct: 369 PDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADALEVGT 428
Query: 362 VGVNEGLISTE----VAPFGGVKQSGLGREGSKY 391
V +N + PF G K SG+G +G
Sbjct: 429 VNINS---KCQRGPDHFPFLGRKDSGIGTQGIGD 459
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 292 bits (749), Expect = 3e-95
Identities = 140/381 (36%), Positives = 207/381 (54%), Gaps = 7/381 (1%)
Query: 27 SLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86
S +L +V A ++++A + GE IP + L++P GV I +N PL
Sbjct: 74 SAMLGDVMVAAALLDYFAGLVTELKGETIPVG-GRNLHYTLREPYGVVARIVAFNHPLMF 132
Query: 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLT 146
K+ LA G TVVVKP E PL+AL AELA + +PPGV N++ G+ G AL+
Sbjct: 133 AAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFNILPGDGATAGAALVR 191
Query: 147 SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA-K 205
P V++I GS G+ +M AA +K V+LELGG IVF DAD A + A+A
Sbjct: 192 HPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFPDADPEAAADAAVAGMN 251
Query: 206 FRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVE 265
F GQ+C +R+ V E IY++ + V +KVGD GPL+++ ++V
Sbjct: 252 FTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVM 311
Query: 266 TFVEDAVSKGAKVLLGGRR---HSLGMTFY-EPTVLSNVKSEMLVSREEVFGPVAPLLCF 321
+++ A +GA+++ GG R +L FY EPTV ++V M ++REE+FGPV +L +
Sbjct: 312 HYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRW 371
Query: 322 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQ 381
+ E E + AN GL A I+TN++ + R + +E G V +N APFGGVK
Sbjct: 372 RDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKN 431
Query: 382 SGLGREGSKYGMDEFLEIKYV 402
SG+GRE + + + K V
Sbjct: 432 SGIGREECLEELLSYTQEKNV 452
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 290 bits (743), Expect = 8e-94
Identities = 147/366 (40%), Positives = 212/366 (57%), Gaps = 5/366 (1%)
Query: 37 AKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 96
A+ I +YAE +VYGE+ T ++++PVGV AI PWNFPL + K+GPALA
Sbjct: 125 ARAIRWYAEAIDKVYGEVAT-TSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALA 183
Query: 97 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFT 156
G +V++KPSE +PL+A+ A LA +AG+P GV+NVV G + G AL + I FT
Sbjct: 184 AGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFT 243
Query: 157 GSTAVGKKLMAGAAGT-VKKVSLELGGNAPCIVFDDA-DLNVAVNGALAAKFRNSGQTCV 214
GST GK+L+ A + +K+V LE GG + IVF D DL A + A F N GQ C+
Sbjct: 244 GSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCI 303
Query: 215 CANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK 274
R+L++E I ++F + +N + G G LI+ A + V +F+ + SK
Sbjct: 304 AGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESK 363
Query: 275 GAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT 334
G ++LL GR L PT+ +V +SREE+FGPV + F +EE+A+ +AND+
Sbjct: 364 G-QLLLDGRNAGL-AAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDS 421
Query: 335 NAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMD 394
GL A ++T +L R R+S L+ G V VN PFGG KQSG GR+ S + ++
Sbjct: 422 QYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALE 481
Query: 395 EFLEIK 400
+F E+K
Sbjct: 482 KFTELK 487
|
Length = 494 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 282 bits (723), Expect = 3e-91
Identities = 141/372 (37%), Positives = 209/372 (56%), Gaps = 2/372 (0%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ F+A A+ + G L + + P+GV +I PWN+PL M K+
Sbjct: 99 EIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 158
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PALA G VV+KPSE TPLTAL AELA P GVVN++ G +GD L +VR
Sbjct: 159 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVR 217
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
++ TGS A G+ +++ A ++K+ +ELGG AP IVFDDAD++ V G F N+GQ
Sbjct: 218 MVSLTGSIATGEHILSHTAPSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQ 277
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C A R+ Q GIY+ + AV LK G E GPL + A LE+V VE+A
Sbjct: 278 DCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEA 337
Query: 272 VSKG-AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
+ G KV+ GG + ++ PT+L+ K + + ++EVFGPV + F EE+ ++
Sbjct: 338 KALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNW 397
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 390
AND+ GLA+ ++T ++ R R+S L+YG VN + P GG K SG G++ S
Sbjct: 398 ANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSL 457
Query: 391 YGMDEFLEIKYV 402
YG++++ ++++
Sbjct: 458 YGLEDYTVVRHI 469
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 279 bits (714), Expect = 1e-89
Identities = 151/383 (39%), Positives = 220/383 (57%), Gaps = 14/383 (3%)
Query: 30 LREVDYGAKFIEFYAEEAKRVYGEIIPATLP----DRRLFVLKQPV-GVAGAITPWNFPL 84
L EV A + F A EA R G+I L R++F ++P+ GV AITP+N P+
Sbjct: 94 LYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPM 153
Query: 85 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDAL 144
+ K+ PA+A +VVKPSE TPL+AL A++ +AG+PP ++ VV G+ +I D L
Sbjct: 154 NQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADEL 213
Query: 145 LTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA 204
+T+P V +TFTG A+GK + A A ++ LELGGN P IV +DADL+ A + A+
Sbjct: 214 ITNPHVDLVTFTGGVAIGKYIAARAG--YRRQVLELGGNDPLIVMEDADLDRAADLAVKG 271
Query: 205 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 264
++NSGQ C R+LVQE + ++F + + + + GD V G +I++AA
Sbjct: 272 SYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILF 331
Query: 265 ETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324
E V +A+++GA++LLG R Y PTVL V M + REE FGPV+P++ F
Sbjct: 332 EARVNEAIAQGARLLLGNVRDG---ALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDI 388
Query: 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE--GLISTEVAPFGGVKQS 382
++AI ++N T GL++ + TN L R L+ G V V E G E+ PFGG+K S
Sbjct: 389 DDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGY-RLELTPFGGIKDS 447
Query: 383 GLG-REGSKYGMDEFLEIKYVCL 404
GLG +EG + M F +K L
Sbjct: 448 GLGYKEGVQEAMKSFTNLKTYSL 470
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 276 bits (708), Expect = 5e-89
Identities = 128/372 (34%), Positives = 185/372 (49%), Gaps = 4/372 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ + + A+ +I ++ ++P+GV I PWN+P V
Sbjct: 78 EIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAV 137
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PAL G V++K S TPL A +AG+P GV V+ + AL+ P++
Sbjct: 138 IPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLHLSHET-SAALIADPRID 196
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
++FTGS A G+ + AAG KV LELGG P V DADL+ A + F NSGQ
Sbjct: 197 HVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQ 256
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
+C R+ V E IY+ F +AF VK K+GD GP+++ A + V + DA
Sbjct: 257 SCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADA 316
Query: 272 VSKGAKVLLGGRRHSL---GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 328
++KGA+ L+ G G + PTVL+NV M V REE FGPV ++ K++ EAI
Sbjct: 317 IAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAI 376
Query: 329 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREG 388
+ ND+ GL A ++T ++ R + E LE G V +N + GVK SG G
Sbjct: 377 ALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTL 436
Query: 389 SKYGMDEFLEIK 400
S+ G D+ K
Sbjct: 437 SRLGYDQLTRPK 448
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 275 bits (706), Expect = 2e-88
Identities = 145/372 (38%), Positives = 213/372 (57%), Gaps = 8/372 (2%)
Query: 35 YGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 94
+ A E Y G P +P RR + ++ VGV GAITPWNFP + K+GPA
Sbjct: 109 FAADLAESY--AWTTDLGVASPMGIPTRRT-LRREAVGVVGAITPWNFPHQINLAKLGPA 165
Query: 95 LACGCTVVVKPSEFTPLTALAAAEL-ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKI 153
LA G TVV+KP+ TP A EL A PPGVVN+V + +G L P+V +
Sbjct: 166 LAAGNTVVLKPAPDTPWCAAVLGELIAEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMV 225
Query: 154 TFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTC 213
+FTGSTA G+ +MA AA T+KKV LELGG + IV DDADL A + A ++GQ C
Sbjct: 226 SFTGSTATGRAVMADAAATLKKVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGC 285
Query: 214 VCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 273
R++V Y++ A + + ++K GD G V GP+I+ ++V+++++ AV+
Sbjct: 286 AITTRLVVPRARYDEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVA 345
Query: 274 KGAKVLLGGRR---HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
+G + GG R G F EPTV++ + + V+REE+FGPV ++ +++A+ +
Sbjct: 346 EGGRFACGGGRPADRDRGF-FVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRI 404
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 390
AND+ GL+ +F + +R V+ + G V VN G+ + APFGG KQSG+GRE
Sbjct: 405 ANDSPYGLSGTVFGADPERAAAVAARVRTGTVNVNGGVWYSADAPFGGYKQSGIGREMGV 464
Query: 391 YGMDEFLEIKYV 402
G +E+LE K +
Sbjct: 465 AGFEEYLETKLI 476
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 272 bits (697), Expect = 3e-87
Identities = 129/345 (37%), Positives = 194/345 (56%), Gaps = 11/345 (3%)
Query: 69 QPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA---LAAAELALQA-G 124
+P+GV GAI WN+P + + AL G +VVK SE ++ L+ L A G
Sbjct: 119 EPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACG 178
Query: 125 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNA 184
P +V +V P+ +AL + P + ITF GS VGKK+MA AA ++ V LELGG
Sbjct: 179 HDPDLVQLVTC-LPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKD 237
Query: 185 PCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244
P IV DDADL+ + + F++SGQ C+ RV+V E IY+K + + V+ L+ G
Sbjct: 238 PAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGP 297
Query: 245 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM----TFYEPTVLSNV 300
V G +I+ A +++E V DAV KGA++L GG+R+ ++ PT+L +V
Sbjct: 298 PLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDV 357
Query: 301 KSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYG 360
+M +++EEVFGPV ++ +EEA+ +AN T GL A +F +++R R++ LE G
Sbjct: 358 TPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETG 417
Query: 361 LVGVNEGLISTEVA--PFGGVKQSGLGREGSKYGMDEFLEIKYVC 403
+V +N+ ++ V PFGGVK SG GR + G+ K V
Sbjct: 418 MVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVT 462
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 268 bits (687), Expect = 1e-85
Identities = 124/339 (36%), Positives = 179/339 (52%), Gaps = 15/339 (4%)
Query: 65 FVLKQPVGVAGAITPWNFPLAMITR-KVGPALACGCTVVVKPSEFTPLTALAAAELALQA 123
+ +QP+GV ITP+NFP AMI A+ACG T V+KPSE P A+ AEL +A
Sbjct: 131 YSYRQPLGVVAGITPFNFP-AMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEA 189
Query: 124 GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGN 183
G+P GV+NVV G + +ALL P ++ ++F GST VG+ + AA K+V G
Sbjct: 190 GLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKRVQALGGAK 248
Query: 184 APCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243
+V DADL N + A F +GQ C+ + + +++ + K LKVG
Sbjct: 249 NHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVG 308
Query: 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYE------PTVL 297
G G GP+I+ AA E++E +E V +GAK++L GR + YE PT+L
Sbjct: 309 AGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVK--VPGYENGNFVGPTIL 366
Query: 298 SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL 357
NV +M + +EE+FGPV ++ T +EAI + N G A IFT + + +
Sbjct: 367 DNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREV 426
Query: 358 EYGLVGVNEGLISTEVA--PFGGVKQSGLGREGSKYGMD 394
+ G+VG+N I +A FGG K S G + YG D
Sbjct: 427 DAGMVGINVP-IPVPLAFFSFGGWKGSFFG-DLHFYGKD 463
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 268 bits (687), Expect = 4e-85
Identities = 137/386 (35%), Positives = 208/386 (53%), Gaps = 19/386 (4%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEII-PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 90
+V F+E+YA E R+ G + D R +P+GV I+PWNFPLA++
Sbjct: 129 DVAEAIDFLEYYAREMLRLRGFPVEMVPGEDNRYVY--RPLGVGAVISPWNFPLAILAGM 186
Query: 91 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQV 150
AL G TVV+KP+E TP+ A E+ +AG+PPGVVN + G ++GD L+ P V
Sbjct: 187 TTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDV 246
Query: 151 RKITFTGSTAVGKKLMAGAAGT------VKKVSLELGGNAPCIVFDDADLNVAVNGALAA 204
R I FTGS VG ++ AA +K+V E+GG IV +DADL+ A G + +
Sbjct: 247 RFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRS 306
Query: 205 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 264
F GQ C +RV+V E +Y++F + + K LKVGD V GP+I+K A +++
Sbjct: 307 AFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRI 366
Query: 265 ETFVEDAVSKGAKVLLGGRR--HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322
++E S+G ++LLGG + F +PT+ ++V + +++EE+FGPV ++ K
Sbjct: 367 RRYIEIGKSEG-RLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAK 425
Query: 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST----EVAPFGG 378
+EA+ +ANDT GL +F+ + + R E G + N T PFGG
Sbjct: 426 DFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRK--ITGALVGRQPFGG 483
Query: 379 VKQSGLG-REGSKYGMDEFLEIKYVC 403
K SG G + G + +F++ K V
Sbjct: 484 FKMSGTGSKAGGPDYLLQFMQPKTVT 509
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 261 bits (670), Expect = 3e-83
Identities = 145/377 (38%), Positives = 207/377 (54%), Gaps = 5/377 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPD---RRLFVLKQPVGVAGAITPWNFPLAMIT 88
E AK +YAE A+ + + PA R +V QP+GV A+ PWNFPL +
Sbjct: 83 EALKCAKGFRYYAEHAEALLADE-PADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVV 141
Query: 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSP 148
R PAL G ++K + P TAL A+L +AG P G ++ + + +A+L P
Sbjct: 142 RFAAPALMAGNVGLLKHASNVPQTALYLADLFRRAGFPDGCFQTLLVGSGAV-EAILRDP 200
Query: 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
+V T TGS G+ + A A +KK LELGG+ P IV ADL+ A A+ A+ +N
Sbjct: 201 RVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQN 260
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 268
+GQ+C+ A R +V +Y+ FA+ F + L+VGD GPL + ++VE V
Sbjct: 261 NGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQV 320
Query: 269 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 328
+DAV+ GA +L GG+R FY PTV++++ +M + EEVFGPVA L +EAI
Sbjct: 321 DDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAI 380
Query: 329 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREG 388
+AN T GL + +T + R + LE G V +N +S PFGGVK+SG GRE
Sbjct: 381 EIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGREL 440
Query: 389 SKYGMDEFLEIKYVCLG 405
S +G+ EF IK V +G
Sbjct: 441 SAHGIREFCNIKTVWIG 457
|
Length = 457 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 258 bits (662), Expect = 7e-82
Identities = 133/342 (38%), Positives = 195/342 (57%), Gaps = 13/342 (3%)
Query: 69 QPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPG 128
+P+GV G I PWNFPL M T K+ PALA G VV+KP+E TP + L EL + +PPG
Sbjct: 135 EPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMEL-IGDLLPPG 193
Query: 129 VVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIV 188
VVNVV G + G L +S ++ K+ FTG T G+ +M A+ + V+LELGG +P I
Sbjct: 194 VVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENIIPVTLELGGKSPNIF 253
Query: 189 F------DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 242
F DDA + A+ G + N G+ C C +R L+QE IY++F + + VK +K
Sbjct: 254 FADVMDADDAFFDKALEGFVMFAL-NQGEVCTCPSRALIQESIYDRFMERALERVKAIKQ 312
Query: 243 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT----FYEPTVLS 298
G+ + G + LEK+ ++++ +GA+VL GG R+ LG +Y PT
Sbjct: 313 GNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFK 372
Query: 299 NVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE 358
++M + +EE+FGPV + FK EEEA+ +ANDT GL A ++T + +R+ ++
Sbjct: 373 G-GNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQ 431
Query: 359 YGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400
G V N + A FGG KQSG+GRE K +D + + K
Sbjct: 432 AGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQTK 473
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 245 bits (627), Expect = 1e-76
Identities = 135/347 (38%), Positives = 197/347 (56%), Gaps = 10/347 (2%)
Query: 51 YGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 110
YG IP+ P R+ P+GV G IT +NFP+A+ AL CG VV KPS TP
Sbjct: 113 YGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTP 172
Query: 111 LTALAA----AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166
LTA+A A + + G+P + ++V G A D+G+AL+ P+V ++FTGSTAVG+++
Sbjct: 173 LTAIAVTKIVARVLEKNGLPGAIASLVCGGA-DVGEALVKDPRVPLVSFTGSTAVGRQVG 231
Query: 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY 226
A + LELGGN IV +DADL++AV L A +GQ C R++V E IY
Sbjct: 232 QAVAARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIY 291
Query: 227 EKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 286
++ + KA K +++GD +G + GPL KAA++ +E+A S+G VL GG+
Sbjct: 292 DEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVID 351
Query: 287 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 346
+ EPT++ S+ + +EE F P+ +L F T EEAI N+ GL++ IFT +
Sbjct: 352 GPGNYVEPTIVE-GLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTD 410
Query: 347 LQR--TWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGRE-GS 389
L+ W + + G+V VN G E+ FGG K++G GRE GS
Sbjct: 411 LRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGS 457
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 243 bits (622), Expect = 2e-76
Identities = 123/340 (36%), Positives = 180/340 (52%), Gaps = 20/340 (5%)
Query: 63 RLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQ 122
+ +V+ +P+GV I PWN+PL + + A+A G TVV+KPSE P T+ A+L +
Sbjct: 93 KAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKL-IP 151
Query: 123 AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGG 182
P V VV G ++ ALL P I FTGS AVGK +M AA + V+LELGG
Sbjct: 152 KYFDPEAVAVVEG-GVEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGG 209
Query: 183 NAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 242
+PCIV DA+L VA KF N+GQTC+ + VLV E I ++ + KA+K
Sbjct: 210 KSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIKDELIEELKKAIKEF-- 267
Query: 243 GDGFGEGVVQ----GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLS 298
+GE + G +IN+ +++ + ++D KV++GG+ PT+L
Sbjct: 268 ---YGEDPKESPDYGRIINERHFDRLASLLDD-----GKVVIGGQVDKEERYI-APTILD 318
Query: 299 NVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE 358
+V + + +EE+FGP+ P+L + +EAI N LA Y+F+ + RV
Sbjct: 319 DVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETS 378
Query: 359 YGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEF 396
G V VN+ L+ + PFGGV SG+G K G D F
Sbjct: 379 SGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTF 418
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 237 bits (606), Expect = 6e-74
Identities = 119/350 (34%), Positives = 177/350 (50%), Gaps = 19/350 (5%)
Query: 56 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 115
P L + + +P GV I+PWN+P + + A+A G T ++KPSE TP T+
Sbjct: 86 PLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAV 145
Query: 116 AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 175
A++ +A V V G+A ++ ALL P I FTGS AVGK +MA AA +
Sbjct: 146 IAKIIREA-FDEDEVAVFEGDA-EVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLAS 202
Query: 176 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSK 235
V+LELGG +P IV + ADL A KF N+GQTC+ + V V E + + F +
Sbjct: 203 VTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHESVKDAFVEHLKA 262
Query: 236 AV-KNLKVGDGFGEGVVQGP----LINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 290
+ K G P ++N ++++ ++DAV+KGAKV GG +
Sbjct: 263 EIEKFY----GKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGG-QFDAAQR 317
Query: 291 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 350
+ PTVL+NV +M + +EE+FGPV P++ ++ +E I N LA Y+F+ +
Sbjct: 318 YIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANV 377
Query: 351 WRVSEALEYGLVGVNEGLISTEVA----PFGGVKQSGLGREGSKYGMDEF 396
+V G V VN+ ++ PFGGV SG+G YG F
Sbjct: 378 NKVLARTSSGGVVVNDVVL--HFLNPNLPFGGVNNSGIGSYHGVYGFKAF 425
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 234 bits (598), Expect = 5e-72
Identities = 114/353 (32%), Positives = 187/353 (52%), Gaps = 10/353 (2%)
Query: 39 FIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACG 98
F+E+YA + ++ + P P+GV I+PWNFP A++ A+ G
Sbjct: 140 FLEYYARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAG 199
Query: 99 CTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGS 158
TV++KP+ TP+ A E+ +AG+P GVVN V G+ ++GD L+ P+ R ITFTGS
Sbjct: 200 NTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGS 259
Query: 159 TAVGKKLMAGAAGT------VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQT 212
VG ++ AA +K+V E+GG +V +DADL++A +A+ F SGQ
Sbjct: 260 REVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQK 319
Query: 213 CVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 272
C +R +V E +Y++ + + K L VG+ + GP+IN+A+ +K+ +++E
Sbjct: 320 CSACSRAIVHEDVYDEVLEKVVELTKELTVGNP-EDNAYMGPVINQASFDKIMSYIEIGK 378
Query: 273 SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 332
+G +++LGG F +PT+ ++V + + +EE+FGPV + K + A+ +AN
Sbjct: 379 EEG-RLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIAN 437
Query: 333 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSG 383
+T GL + +NN + + G + N G V PFGG SG
Sbjct: 438 NTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSG 490
|
Length = 514 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 232 bits (593), Expect = 7e-72
Identities = 136/372 (36%), Positives = 204/372 (54%), Gaps = 4/372 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV A ++YAE + + P + +++ + +P+G AI PWNFPL + R
Sbjct: 89 EVAKSANLCDWYAEHGPAML-KAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGA 147
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIG-DALLTSPQV 150
P L G ++K + A A++ AGIP GV + NA + G ++ ++
Sbjct: 148 VPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQGVYGWL--NADNDGVSQMINDSRI 205
Query: 151 RKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 210
+T TGS G + A A +KK LELGG+ P IV +DADL +AV A+A +++N+G
Sbjct: 206 AAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTG 265
Query: 211 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 270
Q C A R +++EGI F + F A LK+GD E GP+ +++ VE
Sbjct: 266 QVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEA 325
Query: 271 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
+++GA++LLGG + + +Y PTVL+NV EM REE+FGPVA + K E A+ +
Sbjct: 326 TLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALEL 385
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 390
AND+ GL+A IFT + + +++ LE G V +N S FGGVK+SG GRE S
Sbjct: 386 ANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSH 445
Query: 391 YGMDEFLEIKYV 402
+G+ EF I+ V
Sbjct: 446 FGLHEFCNIQTV 457
|
Length = 462 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 231 bits (592), Expect = 1e-71
Identities = 133/370 (35%), Positives = 191/370 (51%), Gaps = 11/370 (2%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATL----PDRRLFVLKQPVGVAGAITPWNFPLAMI 87
EV +E A+E ++ G IP L R F ++P+GV AI+ +N PL +I
Sbjct: 82 EVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLI 141
Query: 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTS 147
+V PA+A GC V+VKP+ TPL+ LA +L +AG+P G V + + L+T
Sbjct: 142 VHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEAGLPEGWCQAVPCEN-AVAEKLVTD 200
Query: 148 PQVRKITFTGSTAVGKKLMAG-AAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKF 206
P+V +F GS VG L + A GT + +LE GG AP IV ADL+ + + F
Sbjct: 201 PRVAFFSFIGSARVGWMLRSKLAPGT--RCALEHGGAAPVIVDRSADLDAMIPPLVKGGF 258
Query: 207 RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVET 266
++GQ CV RV V I + FA + A + L VGD GPLI +++VE
Sbjct: 259 YHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEE 318
Query: 267 FVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326
+V +AV+ GA++L GG+R L T Y PTVL + + VS +E+FGPV + + +E
Sbjct: 319 WVNEAVAAGARLLCGGKR--LSDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDE 376
Query: 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE-GLISTEVAPFGGVKQSGLG 385
AI AN A +FT +L + L+ V VN+ + PF G +QSG G
Sbjct: 377 AIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYG 436
Query: 386 REGSKYGMDE 395
G Y M +
Sbjct: 437 TGGIPYTMHD 446
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 226 bits (578), Expect = 1e-69
Identities = 118/343 (34%), Positives = 181/343 (52%), Gaps = 30/343 (8%)
Query: 65 FVLKQPVGVAGAITPWNFPLAMITRKVGP---ALACGCTVVVKPSEFTPLTALAAAELAL 121
++ +P GV I PWN+P + + P A+A G T V+KPSE TP T+ A++ +
Sbjct: 95 YIYYEPYGVVLIIAPWNYPFQLA---LAPLIGAIAAGNTAVLKPSELTPNTSKVIAKI-I 150
Query: 122 QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG 181
+ V VV G + LL I FTGS VGK +M AA + V+LELG
Sbjct: 151 EETFDEEYVAVVEGGV-EENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELG 208
Query: 182 GNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 241
G +PCIV +DA+L +A + KF N+GQTCV + VLV E + EKF + +K
Sbjct: 209 GKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIKELKEEIKKF- 267
Query: 242 VGDGFGEGVVQGP----LINKAALEKVETFVEDAVSKGAKVLLGGR--RHSLGMTFYEPT 295
+GE ++ P +IN+ +++ +++ K++ GG R +L + EPT
Sbjct: 268 ----YGEDPLESPDYGRIINEKHFDRLAGLLDN-----GKIVFGGNTDRETL---YIEPT 315
Query: 296 VLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE 355
+L NV + V +EE+FGP+ P+L + T +EAI + LA Y+F+ + + +V E
Sbjct: 316 ILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLE 375
Query: 356 ALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEF 396
L +G +N+ ++ + PFGGV SG+G KY D F
Sbjct: 376 NLSFGGGCINDTIMHLANPYLPFGGVGNSGMGSYHGKYSFDTF 418
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 225 bits (575), Expect = 2e-69
Identities = 130/364 (35%), Positives = 176/364 (48%), Gaps = 67/364 (18%)
Query: 66 VLKQPVGVAGAITPWNFPLAMITRKVGP---ALACGCTVVVKPSEFTPLTALAAAELALQ 122
V QP+GV G I PWN+PL + +GP ALA G V++KPSEFTP T+ AEL L
Sbjct: 97 VEYQPLGVVGIIVPWNYPL-YLA--LGPLIAALAAGNRVMIKPSEFTPRTSALLAEL-LA 152
Query: 123 AGIPPGVVNVVMGNAPDIGDA--------LLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 174
V VV G D+ A LL FTGSTAVG+ +M AA +
Sbjct: 153 EYFDEDEVAVVTG-GADVAAAFSSLPFDHLL---------FTGSTAVGRHVMRAAAENLT 202
Query: 175 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 234
V+LELGG +P I+ DADL A K N+GQTCV + VLV E E+F A
Sbjct: 203 PVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVAAAK 262
Query: 235 KAVKNLKVGDGFGEGVVQGP----LINKAALEKVETFVEDAVSKGAKV---------LLG 281
AV + + P +IN+ +++ +EDA +KGA+V
Sbjct: 263 AAVAKM-----YPTL-ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAA 316
Query: 282 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAY 341
R+ PT++ NV +M V +EE+FGP+ P+L + + +EAI N LA Y
Sbjct: 317 TRK-------LPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALY 369
Query: 342 IFTNN-------LQRTWRVSEALEYGLVGVNEGL--ISTEVAPFGGVKQSGLGREGSKYG 392
F + L+RT S G V +N+ L ++ + PFGGV SG+G K G
Sbjct: 370 YFGEDKAEQDRVLRRT--HS-----GGVTINDTLLHVAQDDLPFGGVGASGMGAYHGKEG 422
Query: 393 MDEF 396
F
Sbjct: 423 FLTF 426
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 223 bits (570), Expect = 1e-68
Identities = 123/338 (36%), Positives = 178/338 (52%), Gaps = 24/338 (7%)
Query: 68 KQPVGVAGAITPWNFPLAMITRKVGP---ALACGCTVVVKPSEFTPLTALAAAELALQAG 124
K+P+GV I PWN+P+ ++ + P A+A GCTVV+KPSE TP TA AEL +
Sbjct: 106 KEPLGVVLIIGPWNYPV-LLA--LSPLVGAIAAGCTVVLKPSELTPHTAALLAEL-VPKY 161
Query: 125 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNA 184
+ P VV G P+ ALL KI +TGS VG+ + AA + V+LELGG +
Sbjct: 162 LDPDAFQVVQGGVPETT-ALLEQK-FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKS 219
Query: 185 PCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244
P IV +ADL +A L KF N+GQ CV + VLV +Y++F + K +
Sbjct: 220 PVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEF---- 275
Query: 245 GFGEGVVQGP----LINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNV 300
+ G P ++N ++++ ++ +KG KV++GG F PT++S+V
Sbjct: 276 -YPGGANASPDYTRIVNPRHFNRLKSLLDT--TKG-KVVIGGEM-DEATRFIPPTIVSDV 330
Query: 301 KSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYG 360
+ + EE+FGPV P++ +EAI + N + LA YIFT++ + G
Sbjct: 331 SWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSG 390
Query: 361 LVGVNEGLISTEV--APFGGVKQSGLGREGSKYGMDEF 396
V +N+ LI V APFGGV SG G KYG D F
Sbjct: 391 GVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTF 428
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 216 bits (553), Expect = 4e-66
Identities = 120/345 (34%), Positives = 174/345 (50%), Gaps = 19/345 (5%)
Query: 60 PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL 119
R + +P GV P+NFP + + PAL G TVV KPSE TP A EL
Sbjct: 87 AQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVEL 146
Query: 120 ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV-SL 178
+AG+PPGV+N+V G + G+AL + + FTGS A G L AG K+ +L
Sbjct: 147 WEEAGLPPGVLNLVQG-GRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILAL 205
Query: 179 ELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY-EKFADAFSKAV 237
E+GGN P +V+D AD++ A + + F +GQ C CA R++V +G + F + +A
Sbjct: 206 EMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAA 265
Query: 238 KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVL 297
K L++G E GPLI AA + +D ++ G + LL R G F P ++
Sbjct: 266 KRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTAFLSPGII 325
Query: 298 --SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN---LQRTWR 352
++ V EE+FGP+ + + +EAI +AN T GL+A + +++ +R
Sbjct: 326 DVTDAAD---VPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLA 382
Query: 353 VSEALEYGLVGVNE---GLISTEVAPFGGVKQSGLGREGSKYGMD 394
A G+V N G ST APFGGV SG R + Y D
Sbjct: 383 RIRA---GIVNWNRPTTGASST--APFGGVGLSGNHRPSAYYAAD 422
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 216 bits (552), Expect = 2e-65
Identities = 119/379 (31%), Positives = 186/379 (49%), Gaps = 14/379 (3%)
Query: 27 SLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86
L + E+++ K ++ Y K + + P + +++ +P+GV I WN+PL +
Sbjct: 70 LLTVAEIEHLLKHLDEYL---KPEKVDTVGVFGPGKS-YIIPEPLGVVLVIGAWNYPLNL 125
Query: 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLT 146
+ A+A G TVV+KPSE +P T+ A+L L + P V V+ G LL
Sbjct: 126 TLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKL-LTKYLDPSYVRVIEGGVEVT-TELLK 183
Query: 147 SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKF 206
P I FTGS VGK +M AA + +LELGG +P IV +L VA KF
Sbjct: 184 EP-FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKF 242
Query: 207 RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVET 266
N+GQTCV + VLV I +KF +A +A+K G+ + ++N+ +++
Sbjct: 243 LNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEF-FGEDPKKSEDYSRIVNEFHTKRLAE 301
Query: 267 FVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326
++D G KV+ GG + + PT++ N + + +EE+FGP+ P+L ++ +E
Sbjct: 302 LIKD---HGGKVVYGG-EVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDE 357
Query: 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL--ISTEVAPFGGVKQSGL 384
+ N LA Y F + + V E G V +N+ + + PFGGV SG+
Sbjct: 358 VLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGM 417
Query: 385 GREGSKYGMDEFLEIKYVC 403
G KYG D F K V
Sbjct: 418 GAYHGKYGFDTFSHPKPVL 436
|
Length = 493 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 214 bits (547), Expect = 1e-64
Identities = 118/383 (30%), Positives = 190/383 (49%), Gaps = 16/383 (4%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV F+E+YA + + + + P GV I+PWNFP A++
Sbjct: 129 EVAEAIDFMEYYARQMIELAKGKPVNSREGETNQYVYTPTGVTVVISPWNFPFAIMVGMT 188
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
+ G VV+KP+E P+ A E+ +AG+P GVV V G+ ++GD L+ P+
Sbjct: 189 VAPIVTGNCVVLKPAEAAPVIAAKFVEILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTS 248
Query: 152 KITFTGSTAVGKKLMAGAAGT------VKKVSLELGGNAPCIVFDDADLNVAVNGALAAK 205
ITFTGS VG ++ AA +K+V E+GG IV +DAD+ +A A +
Sbjct: 249 LITFTGSREVGTRIFERAAKVQPGQKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSA 308
Query: 206 FRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVE 265
F +GQ C +R +V E +Y++ + F + ++LKVG V GP+I++ + K+
Sbjct: 309 FGFAGQKCSAGSRAVVHEKVYDEVVERFVEITESLKVGPPDSADVYVGPVIDQKSFNKIM 368
Query: 266 TFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325
++E ++G +++ GG F PT+ ++V + +++EE+FGPV + +
Sbjct: 369 EYIEIGKAEG-RLVSGGCGDDSKGYFIGPTIFADVDRKARLAQEEIFGPVVAFIRASDFD 427
Query: 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSG 383
EA+ +AN+T GL + +NN R E G + N + V PFGG K SG
Sbjct: 428 EALEIANNTEYGLTGGVISNNRDHINRAKAEFEVGNLYFNRNITGAIVGYQPFGGFKMSG 487
Query: 384 LGREGSKYG----MDEFLEIKYV 402
SK G + F++ K V
Sbjct: 488 T---DSKAGGPDYLALFMQAKTV 507
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 206 bits (526), Expect = 3e-61
Identities = 118/357 (33%), Positives = 176/357 (49%), Gaps = 16/357 (4%)
Query: 39 FIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACG 98
F +YA +A+ ++ + + GV I+PWNFPLA+ T ++ ALA G
Sbjct: 136 FCRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAG 195
Query: 99 CTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGS 158
TV+ KP+E TPL A A EL +AG+P V+ +V G+ +IG+AL+ P++ + FTGS
Sbjct: 196 NTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGS 255
Query: 159 TAVGK---KLMAGAAGTVKKVSLELGG-NAPCIVFDDADLNVAVNGALAAKFRNSGQTCV 214
T K + +A G + + E GG NA IV A AV + + F ++GQ C
Sbjct: 256 TETAKLINRALAERDGPILPLIAETGGKNA-MIVDSTALPEQAVKDVVQSAFGSAGQRC- 313
Query: 215 CANRVL-VQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 273
A R+L +QE I E+F + A+ +LKVGD + GPLI+K A + + E +
Sbjct: 314 SALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTE-LMR 372
Query: 274 KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EEAIHMA 331
A ++ F P ++ V L EVFGP+ ++ FK E +EAI
Sbjct: 373 GEAWLIAPAPLDDGNGYFVAPGIIEIVGIFDL--TTEVFGPILHVIRFKAEDLDEAIEDI 430
Query: 332 NDTNAGLAAYIFTNNLQRTWR-VSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLG 385
N T GL I + + +R E +E G + +N + PFGG SG G
Sbjct: 431 NATGYGLTLGIHSRD-EREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTG 486
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 203 bits (518), Expect = 7e-61
Identities = 121/350 (34%), Positives = 179/350 (51%), Gaps = 29/350 (8%)
Query: 57 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 116
ATL D +++ K+P+GV I WN+PL + + A+A G VV+KPSE +P TA
Sbjct: 88 ATLLDD-VYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLL 146
Query: 117 AELALQAGIP----PGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 172
AEL IP VV+G + L + I +TGST+VGK +M AA
Sbjct: 147 AEL-----IPKYLDKECYPVVLGGVEET--TELLKQRFDYIFYTGSTSVGKIVMQAAAKH 199
Query: 173 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 232
+ V+LELGG +PC V D++VA KF N+GQTC+ + VL + EKF +A
Sbjct: 200 LTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEA 259
Query: 233 FSKAVKNLKVGDGFGEGVVQ----GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 288
K +K + +GE + G +IN ++++ + G KV +GG +
Sbjct: 260 LKKTLK-----EFYGEDPKESPDYGRIINDRHFQRLKKLLS-----GGKVAIGG-QTDEK 308
Query: 289 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 348
+ PTVL++VK V +EE+FGP+ P++ +EAI N LA Y+F+NN +
Sbjct: 309 ERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKK 368
Query: 349 RTWRVSEALEYGLVGVNEGL--ISTEVAPFGGVKQSGLGREGSKYGMDEF 396
++ G V VN+ + + + PFGGV SG+G KY D F
Sbjct: 369 VINKILSNTSSGGVCVNDTIMHYTLDSLPFGGVGNSGMGAYHGKYSFDTF 418
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 203 bits (517), Expect = 2e-60
Identities = 118/378 (31%), Positives = 188/378 (49%), Gaps = 17/378 (4%)
Query: 39 FIEFYAEEAKRVYG---EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 95
FI +YA A R+ E++P D F +G I+PWNFP+A+ T + +
Sbjct: 122 FIRYYARAALRLRYPAVEVVPYPGEDNESFY--VGLGAGVVISPWNFPVAIFTGMIVAPV 179
Query: 96 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITF 155
A G TV+ KP+E + E+ +AG PPGVV + G ++G L ++R I F
Sbjct: 180 AVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINF 239
Query: 156 TGSTAVGKKLMAGAA------GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS 209
TGS GKK+ AA K++ +E GG IV + AD + V G + + F
Sbjct: 240 TGSLETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQ 299
Query: 210 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 269
GQ C A+R+++ +G YE + K + L VG G GP+I+ KV +++E
Sbjct: 300 GQKCSAASRLILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIE 359
Query: 270 DAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE--EA 327
++G +++LGG+R F PTV+ V + +++EE+FGPV ++ +K ++ EA
Sbjct: 360 HGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEA 418
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLG 385
+ +AN T GL +++ + G + +N + V PFGG K SG
Sbjct: 419 LEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTN 478
Query: 386 -REGSKYGMDEFLEIKYV 402
+ G + + FLE+K V
Sbjct: 479 AKTGGPHYLRRFLEMKAV 496
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 199 bits (509), Expect = 4e-59
Identities = 122/368 (33%), Positives = 181/368 (49%), Gaps = 21/368 (5%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGE-------IIPATLPDRRLFVLKQPVGVAGAITPWNFPL 84
EV I + AEE R+ GE P ++ K P+GV AI P+N+P+
Sbjct: 113 EVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPV 172
Query: 85 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDAL 144
+ K+ PAL G VV+KP + AL AG P G+++ V G +IGD L
Sbjct: 173 NLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFL 232
Query: 145 LTSPQVRKITFTG---STAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGA 201
P V I+FTG A+ KK AG V + +ELGG CIV +DADL++A
Sbjct: 233 TMHPGVNCISFTGGDTGIAISKK-----AGMV-PLQMELGGKDACIVLEDADLDLAAANI 286
Query: 202 LAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAAL 261
+ F SGQ C VLV E + + + + V L VG + + P++++++
Sbjct: 287 IKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPEDDCDIT-PVVSESSA 345
Query: 262 EKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 321
+E V DA KGA +R P +L NV+ +M ++ EE FGPV P++
Sbjct: 346 NFIEGLVMDAKEKGATFCQEWKREG---NLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI 402
Query: 322 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVK 380
+ EE IH N +N GL +FT ++ + +S+A+E G V +N + PF G+K
Sbjct: 403 NSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLK 462
Query: 381 QSGLGREG 388
SG+G +G
Sbjct: 463 DSGIGSQG 470
|
Length = 496 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 195 bits (496), Expect = 2e-57
Identities = 113/339 (33%), Positives = 172/339 (50%), Gaps = 8/339 (2%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
+V G + +E + GE ++ ++QP+GV ITP+NFP AMI +
Sbjct: 98 DVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFP-AMIPLWM 156
Query: 92 GP-ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQV 150
P A+ACG T V+KPSE P A+ AEL +AG P GV+NVV G+ + D LL P V
Sbjct: 157 FPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHGDKEAV-DRLLEHPDV 215
Query: 151 RKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 210
+ ++F GST +G+ + + K+V G +V DAD + A + + A + +G
Sbjct: 216 KAVSFVGSTPIGRYIHTTGSAHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAG 275
Query: 211 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 270
Q C+ A V G +++ + + +++G G G GPLI A ++V + +
Sbjct: 276 QRCM-AISAAVLVGAADEWVPEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAG 334
Query: 271 AVSKGAKVLLGGRRHSL----GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326
++GA+VLL GR + + + PT+L V M +EE+FGPV +L T EE
Sbjct: 335 GAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEE 394
Query: 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVN 365
AI + N + G IFT + R +E G VGVN
Sbjct: 395 AIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVN 433
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 191 bits (487), Expect = 6e-56
Identities = 117/348 (33%), Positives = 178/348 (51%), Gaps = 9/348 (2%)
Query: 47 AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPS 106
++++ G IIP+ P+ + + P+G+ G IT +NFP A++ AL CG VV K +
Sbjct: 131 SRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGA 190
Query: 107 EFTPLTALA----AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 162
TPL +A AE+ + +P + G A +IG+A+ ++ ++FTGS+ VG
Sbjct: 191 PTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGA-EIGEAIAKDTRIPLVSFTGSSKVG 249
Query: 163 KKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 222
+ K LEL GN IV DDAD+ +AV L A +GQ C R+L+
Sbjct: 250 LMVQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLH 309
Query: 223 EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 282
E IY+ + K +K+GD +G + GPL + + E +E S+G K+L GG
Sbjct: 310 ESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGG 369
Query: 283 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 342
F +PT++ + + V +EE+FGPV ++ FKT EEAI + N GL++ I
Sbjct: 370 SAIESEGNFVQPTIVE-ISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSI 428
Query: 343 FTNNLQR--TWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGRE 387
FT N + W + G+V VN E+ FGG K +G GRE
Sbjct: 429 FTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGRE 476
|
Length = 508 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 187 bits (476), Expect = 7e-55
Identities = 113/344 (32%), Positives = 170/344 (49%), Gaps = 17/344 (4%)
Query: 66 VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI 125
++ +P+GV I+ WNFP + V A+A G VV+KPSE P T+ A+L + +
Sbjct: 97 IVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKL-IPEYL 155
Query: 126 PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAP 185
+ V+ G ALL + KI FTGS VG+ +MA AA + V+LELGG P
Sbjct: 156 DTKAIKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCP 213
Query: 186 CIVFDDADLNVAVNGALAAKF-RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244
IV DL VAV K+ N+GQ C+ + VLV+E DA ++
Sbjct: 214 VIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAPTLIDALKNTLEKF---- 269
Query: 245 GFGEGVVQGP----LINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNV 300
FGE + ++N +++ ++D S K++ GG R + + EPT+L +
Sbjct: 270 -FGENPKESKDLSRIVNSHHFQRLSRLLDDP-SVADKIVHGGERDEKNL-YIEPTILLDP 326
Query: 301 KSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYG 360
+ + EE+FGP+ P++ K EE+I + N LAAY+FT N + R+ G
Sbjct: 327 PLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSG 386
Query: 361 LVGVNEGLISTEVA--PFGGVKQSGLGREGSKYGMDEFLEIKYV 402
V N+ ++ + PFGGV +SG G K+ D F K V
Sbjct: 387 GVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAV 430
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 179 bits (457), Expect = 9e-52
Identities = 114/340 (33%), Positives = 178/340 (52%), Gaps = 6/340 (1%)
Query: 59 LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAE 118
+PD R + +P GV P+NFP + + PAL G TVV KPSE TP A +
Sbjct: 121 MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVK 180
Query: 119 LALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV-S 177
L +AG+P GV+N+V G A + G AL P + + FTGS+ G L AG +K+ +
Sbjct: 181 LWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKILA 239
Query: 178 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY-EKFADAFSKA 236
LE+GGN P IV + AD++ AV+ + + F ++GQ C CA R+LV +G + F +
Sbjct: 240 LEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEV 299
Query: 237 VKNLKVGDGFGEGV-VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPT 295
+ L VG E G +I+ A +++ ++ G K LL R+ G P
Sbjct: 300 AERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPG 359
Query: 296 VLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE 355
++ +V + EE FGP+ ++ + +EAI +AN+T GL+A + +++ + R
Sbjct: 360 II-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLL 418
Query: 356 ALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMD 394
+ G+V N+ L ++ APFGG+ SG R + Y D
Sbjct: 419 EIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYAAD 458
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 177 bits (451), Expect = 8e-51
Identities = 114/348 (32%), Positives = 169/348 (48%), Gaps = 22/348 (6%)
Query: 59 LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAE 118
+ D + +P GV P+NFP + + PAL G TVV KPSE TP A +
Sbjct: 123 MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVK 182
Query: 119 LALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV-S 177
L QAG+P GV+N+V G + G AL P + + FTGS G L AG +K+ +
Sbjct: 183 LWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILA 241
Query: 178 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY-EKFADAFSKA 236
LE+GGN P ++ + AD++ AV+ + + F ++GQ C CA R+LV +G + F
Sbjct: 242 LEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAV 301
Query: 237 VKNLKVGDGFGEGV-VQGPLI-NKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEP 294
K L VG E G +I +AA V ++ G K LL + G P
Sbjct: 302 AKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQ-AQLLALGGKSLLEMTQLQAGTGLLTP 360
Query: 295 TVL--SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN---LQR 349
++ + V + EE FGP+ ++ + +EAI +AN+T GL+A + +++ +
Sbjct: 361 GIIDVTGVAE---LPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQ 417
Query: 350 TWRVSEALEYGLVGVNE---GLISTEVAPFGGVKQSGLGREGSKYGMD 394
A G+V N+ G S APFGGV SG R + Y D
Sbjct: 418 FLLEIRA---GIVNWNKPLTGASSA--APFGGVGASGNHRPSAYYAAD 460
|
Length = 487 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 170 bits (431), Expect = 3e-47
Identities = 126/378 (33%), Positives = 192/378 (50%), Gaps = 17/378 (4%)
Query: 36 GAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP-A 94
G + +E A GE +P + +++P+GV I P+NFP AMI + P A
Sbjct: 215 GLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFP-AMIPLWMFPVA 273
Query: 95 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKIT 154
+ CG T ++KPSE P ++ AELA++AG+P GV+N+V G D +A+ +R ++
Sbjct: 274 VTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTN-DTVNAICDDEDIRAVS 332
Query: 155 FTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCV 214
F GS G + A AA K++ +G +V DA+++ +N LAA F +GQ C+
Sbjct: 333 FVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCM 392
Query: 215 CANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK 274
+ V V G + + D + K LKV G GP+I+K A E++ ++ V
Sbjct: 393 ALSTV-VFVGDAKSWEDKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDD 451
Query: 275 GAKVLLGGRR-----HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EEA 327
GAK+LL GR + G F PT+LS V +M +EE+FGPV L+C + +EA
Sbjct: 452 GAKLLLDGRDIVVPGYEKG-NFIGPTILSGVTPDMECYKEEIFGPV--LVCMQANSFDEA 508
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL-ISTEVAPFGGVKQSGLGR 386
I + N G A IFT++ + +E G +G+N + + F G K S G
Sbjct: 509 ISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGD 568
Query: 387 EG--SKYGMDEFLEIKYV 402
K G+D F +IK V
Sbjct: 569 LNFYGKAGVDFFTQIKLV 586
|
Length = 604 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 165 bits (420), Expect = 2e-46
Identities = 119/351 (33%), Positives = 173/351 (49%), Gaps = 28/351 (7%)
Query: 66 VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI 125
V+ +P+GV + WNFP+ + + A+A G VV+KPSE P T +A LA A I
Sbjct: 104 VVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPAT---SAFLA--ANI 158
Query: 126 P----PGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG 181
P V V+ G P +G+ LL KI FTGS VG+ +M AA + V+LELG
Sbjct: 159 PKYLDSKAVKVIEG-GPAVGEQLLQHKW-DKIFFTGSPRVGRIIMTAAAKHLTPVALELG 216
Query: 182 GNAPCIV--FDDA-DLNVAVNGALAAKFRN-SGQTCVCANRVLVQEGIYEKFADAFSKAV 237
G PCIV + D VAVN + K+ + +GQ C+ + VLV+E + +
Sbjct: 217 GKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTI 276
Query: 238 KNLKVGDGFGEGVVQ----GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYE 293
K FGE + ++NK +++ ++D A ++ GG + F E
Sbjct: 277 KKF-----FGENPRESKSMARILNKKHFQRLSNLLKDPRVA-ASIVHGGSIDEKKL-FIE 329
Query: 294 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 353
PT+L N + + EE+FGP+ P++ K E++I N LA Y FTNN + R+
Sbjct: 330 PTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRI 389
Query: 354 SEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402
G V N+ +I + + PFGGV +SG GR KY D F K V
Sbjct: 390 LSETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAV 440
|
Length = 484 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 155 bits (394), Expect = 1e-42
Identities = 114/383 (29%), Positives = 173/383 (45%), Gaps = 29/383 (7%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV F +YA++ + V GE + GV I+PWNFPLA+ T ++
Sbjct: 134 EVREAVDFCRYYAKQVRDVLGEFS------------VESRGVFVCISPWNFPLAIFTGQI 181
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
ALA G TV+ KP+E T L A A EL +AG P G + ++ G D+G AL + P++
Sbjct: 182 SAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIA 241
Query: 152 KITFTGSTAVGKKL---MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
+ FTGST V + + +A + E GG IV A V L + F +
Sbjct: 242 GVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDS 301
Query: 209 SGQTCVCANRVL-VQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 267
+GQ C A RVL VQE + ++ A++ LKVG GP+I+ A + +
Sbjct: 302 AGQRC-SALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAH 360
Query: 268 VEDAVSKG---AKVLLGGRRHSLGMTFYEPTVLS-NVKSEMLVSREEVFGPVAPLLCFKT 323
+E A++ L R TF PT+ + +E+ EEVFGPV ++ +K
Sbjct: 361 IEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFELDDIAEL---SEEVFGPVLHVVRYKA 417
Query: 324 EE--EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGV 379
E + + N T GL + + + + G VN + V PFGG
Sbjct: 418 RELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQ 477
Query: 380 KQSGLG-REGSKYGMDEFLEIKY 401
SG G + G + + +++Y
Sbjct: 478 GLSGTGPKAGGPHYLYRLTQVQY 500
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 152 bits (384), Expect = 3e-41
Identities = 108/343 (31%), Positives = 173/343 (50%), Gaps = 15/343 (4%)
Query: 66 VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI 125
++ +P+GV I+ WN+P + V A++ G VV+KPSE P ++ A+L L+ +
Sbjct: 108 IVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKL-LEQYL 166
Query: 126 PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAP 185
V VV G + L + KI +TGS+ +G+ +MA AA + V LELGG +P
Sbjct: 167 DSSAVRVVEGAVTET--TALLEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSP 224
Query: 186 CIVFDDADLNVAVNGALAAKFR-NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244
+V D DL V V +A K+ N+GQ C+ + +L + K DA K ++ G
Sbjct: 225 VVVDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETF-YGK 283
Query: 245 GFGEGVVQGPLINKAALEKVETFV-EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSE 303
E ++N +++ + E VS K++ GG + + PT+L +V +
Sbjct: 284 NPMESKDMSRIVNSTHFDRLSKLLDEKEVSD--KIVYGGEKDRENLKI-APTILLDVPLD 340
Query: 304 MLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVG 363
L+ EE+FGP+ P+L EE+ + LAAY+FT+N + R + + G +
Sbjct: 341 SLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIV 400
Query: 364 VNEGLISTEVA----PFGGVKQSGLGREGSKYGMDEFLEIKYV 402
VN+ I+ +A PFGGV +SG+G K+ D F K V
Sbjct: 401 VND--IAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAV 441
|
Length = 484 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 6e-39
Identities = 119/365 (32%), Positives = 177/365 (48%), Gaps = 28/365 (7%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV F+ +YA +A+ +G + +P+G I+PWNFPLA+ T ++
Sbjct: 210 EVREAVDFLRYYAGQARDTFGN------------LTHRPLGPVVCISPWNFPLAIFTGQI 257
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
ALA G +V+ KP+E TPL A A L +AG+PPGV+ ++ G +G AL +V
Sbjct: 258 AAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVA 317
Query: 152 KITFTGSTAVGKKL---MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
+ FTGST V + + +A G + E GG IV A V LA+ F +
Sbjct: 318 GVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDS 377
Query: 209 SGQTCVCANRVL-VQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 267
+GQ C A RVL +QE + ++ A+ L+VG+ GP+I+ A +E
Sbjct: 378 AGQRC-SALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKH 436
Query: 268 VEDAVSKGAKVLLGGRRHSLGM-TFYEPTV--LSNVKSEMLVSREEVFGPVAPLLCFKTE 324
++ SKG V +SL TF PT+ L N+ E+ + EVFGPV ++ +K +
Sbjct: 437 IQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELENL-DEL---QREVFGPVLHVVRYKRD 492
Query: 325 --EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVK 380
+E I N T GL + T + V+E G + VN ++ V PFGG
Sbjct: 493 ELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEG 552
Query: 381 QSGLG 385
SG G
Sbjct: 553 LSGTG 557
|
Length = 769 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 1e-38
Identities = 119/380 (31%), Positives = 182/380 (47%), Gaps = 57/380 (15%)
Query: 30 LRE-VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88
+RE VD F+ +YA +A+R L +P+G I+PWNFPLA+ T
Sbjct: 651 VREAVD----FLRYYAAQARR--------LLNGPGH----KPLGPVVCISPWNFPLAIFT 694
Query: 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSP 148
++ AL G TV+ KP+E TPL A A L +AG+P + ++ G+ +G AL+ P
Sbjct: 695 GQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADP 754
Query: 149 QVRKITFTGSTAVGK---KLMAGAAGTVKKVSL--ELGG-NAPCIVFDDADLNVAVNGAL 202
++ + FTGST V + + +A +G V L E GG NA IV A V +
Sbjct: 755 RIAGVMFTGSTEVARLIQRTLAKRSG--PPVPLIAETGGQNA-MIVDSSALPEQVVADVI 811
Query: 203 AAKFRNSGQTCVCANRVL-VQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAAL 261
A+ F ++GQ C A RVL +QE + ++ A+ L++GD + GP+I+ A
Sbjct: 812 ASAFDSAGQRC-SALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQ 870
Query: 262 EKVETFVEDAVSKGAKVLLGGRRHSLGM-------TFYEPTV--LSNVKSEMLVSREEVF 312
+E +E + G V H L + TF PT+ + ++ S++ EVF
Sbjct: 871 ANIEAHIEAMRAAGRLV------HQLPLPAETEKGTFVAPTLIEIDSI-SDL---EREVF 920
Query: 313 GPVAPLLCFKTEE-----EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG 367
GPV ++ FK +E + I N T GL + + + V+ + G + VN
Sbjct: 921 GPVLHVVRFKADELDRVIDDI---NATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRN 977
Query: 368 LISTEVA--PFGGVKQSGLG 385
+I V PFGG SG G
Sbjct: 978 IIGAVVGVQPFGGEGLSGTG 997
|
Length = 1208 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 147 bits (373), Expect = 2e-38
Identities = 124/379 (32%), Positives = 183/379 (48%), Gaps = 44/379 (11%)
Query: 31 RE-VDYGAKFIEFYAEEAKRVYGEIIPATLP-----DRRLFVLKQPVGVAGAITPWNFPL 84
RE VD F +YA +A+R++G P LP L + GV I+PWNFPL
Sbjct: 647 REAVD----FCRYYAAQARRLFGA--PEKLPGPTGESNELRL--HGRGVFVCISPWNFPL 698
Query: 85 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDAL 144
A+ +V ALA G TV+ KP+E TPL A A +L +AGIP V+ ++ G+ +G AL
Sbjct: 699 AIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAAL 758
Query: 145 LTSPQVRKITFTGSTAVGK---KLMAGAAGTVKKVSL--ELGG-NAPCIVFDDADLNVAV 198
P++ + FTGST + + +A G + V L E GG NA IV A V
Sbjct: 759 TADPRIAGVAFTGSTETARIINRTLAARDGPI--VPLIAETGGQNA-MIVDSTALPEQVV 815
Query: 199 NGALAAKFRNSGQTCVCANRVL-VQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLIN 257
+ + + FR++GQ C A RVL VQE I ++ + A+ LKVGD GP+I+
Sbjct: 816 DDVVTSAFRSAGQRC-SALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVID 874
Query: 258 KAALEKVETFVEDAVSKGAKVLLGGRRHSLGM--TFYEPTV--LSNVKSEMLVSREEVFG 313
A ++ +E + + A++L + F PT + ++ EVFG
Sbjct: 875 AEAKANLDAHIE-RMKREARLLAQLPLPAGTENGHFVAPTAFEIDSIS----QLEREVFG 929
Query: 314 PVAPLLCFKTEE-----EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 368
P+ ++ +K + +AI N T GL I + + R+++ + G V VN
Sbjct: 930 PILHVIRYKASDLDKVIDAI---NATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQ 986
Query: 369 IST--EVAPFGGVKQSGLG 385
I V PFGG SG G
Sbjct: 987 IGAVVGVQPFGGQGLSGTG 1005
|
Length = 1038 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 134 bits (340), Expect = 4e-34
Identities = 109/334 (32%), Positives = 165/334 (49%), Gaps = 25/334 (7%)
Query: 70 PVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGV 129
P+G I+PWNFPLA+ T +V ALA G +V+ KP+E TPL A A + L+AG+P GV
Sbjct: 768 PLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGV 827
Query: 130 VNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV----KKVSL--ELGGN 183
V ++ G +G AL+ +VR + FTGST V + L AG + + + L E GG
Sbjct: 828 VQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIAETGGQ 887
Query: 184 APCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL-VQEGIYEKFADAFSKAVKNLKV 242
IV A V LA+ F ++GQ C A RVL +Q+ + ++ A+ ++
Sbjct: 888 NAMIVDSSALTEQVVADVLASAFDSAGQRC-SALRVLCLQDDVADRTLKMLRGAMAECRM 946
Query: 243 G--DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM---TFYEPTV- 296
G D + GP+I+ A +E ++ +KG V R +S TF PT+
Sbjct: 947 GNPDRLSTDI--GPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLI 1004
Query: 297 -LSNVKSEMLVSREEVFGPVAPLLCFKTEE--EAIHMANDTNAGLAAYIFTNNLQRTWRV 353
L + E+ + EVFGPV ++ + + E I N + GL + T + +V
Sbjct: 1005 ELDSF-DEL---KREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRIDETIAQV 1060
Query: 354 SEALEYGLVGVNEGLISTEVA--PFGGVKQSGLG 385
+ + G + VN ++ V PFGG SG G
Sbjct: 1061 TGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTG 1094
|
Length = 1318 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 3e-33
Identities = 104/384 (27%), Positives = 181/384 (47%), Gaps = 47/384 (12%)
Query: 32 EVDYGAK---FIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV-GVAGAITPWNF----- 82
E+D + F+ F + A+ +Y + ++ + +P+ G A++P+NF
Sbjct: 128 EIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGG 187
Query: 83 --PLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQ----AGIPPGVVNVVMGN 136
A PAL G V+ KPS+ TA+ + L + AG+PPGV+N V G+
Sbjct: 188 NLAGA-------PALM-GNVVLWKPSD----TAVLSNYLVYKILEEAGLPPGVINFVPGD 235
Query: 137 APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG------TVKKVSLELGGNAPCIVFD 190
P +GD +L SP + + FTGST K L T ++ E GG +V
Sbjct: 236 GPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHP 295
Query: 191 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 250
AD++ V + F GQ C A+R V E ++ + + + +K +K+GD
Sbjct: 296 SADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSN 355
Query: 251 VQGPLINKAALEKVETFVEDA-VSKGAKVLLGGR-RHSLGMTFYEPTVL--SNVKSEMLV 306
G +I++ A ++++ +++ A A+++ GG+ S+G F EPTV+ ++ K +++
Sbjct: 356 FMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGY-FVEPTVIETTDPKHKLMT 414
Query: 307 SREEVFGPVAPLLCFKTE--EEAIHMANDTNA-GLAAYIFTNNLQRTWRVSEALEY--GL 361
EE+FGPV + + EE + + + T+ L IF + + ++AL G
Sbjct: 415 --EEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGN 472
Query: 362 VGVNEGLISTEVA--PFGGVKQSG 383
+N+ V PFGG + SG
Sbjct: 473 FYINDKPTGAVVGQQPFGGARASG 496
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 125 bits (315), Expect = 2e-31
Identities = 105/371 (28%), Positives = 170/371 (45%), Gaps = 21/371 (5%)
Query: 32 EVDYGAK---FIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV-GVAGAITPWNFPLAMI 87
E+D A+ F F A+ A+ +Y + P + P +P+ G AI+P+NF
Sbjct: 128 EIDAVAELIDFFRFNAKYARELYEQQ-PISAPGEWNRTEYRPLEGFVYAISPFNFTAIAG 186
Query: 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTS 147
PAL G TV+ KPS+ L+ + +AG+PPGV+N V G+ P + D +L
Sbjct: 187 NLAGAPALM-GNTVIWKPSDTAMLSNYLVMRILEEAGLPPGVINFVPGDGPLVSDTVLAD 245
Query: 148 PQVRKITFTGSTAVGKKLMAGAAGTVKK------VSLELGGNAPCIVFDDADLNVAVNGA 201
P + I FTGST K L A + + + E GG +V AD+ V+G
Sbjct: 246 PDLAGIHFTGSTPTFKHLWKQVAQNLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGT 305
Query: 202 LAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAAL 261
+ F GQ C +R+ V ++ +F + +KVGD G G +I++ +
Sbjct: 306 IRGAFEYQGQKCSACSRLYVPHSLWPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSF 365
Query: 262 EKVETFVEDAVSKGA--KVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLL 319
K+ ++E A S + +L GG+ F EPTV+ + + + +EE+FGPV +
Sbjct: 366 AKIVKYIEHAKSDPSALTILAGGKYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVY 425
Query: 320 CF---KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEY--GLVGVNEGLISTEVA 374
+ K +E + + T+ GL +F + + L + G +N+ V
Sbjct: 426 VYPDDKYKEILDLVDSTTSYGLTGAVFAKDRDAILEADKVLRFAAGNFYINDKPTGAVVG 485
Query: 375 --PFGGVKQSG 383
PFGG + SG
Sbjct: 486 QQPFGGARASG 496
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 106 bits (268), Expect = 3e-25
Identities = 87/302 (28%), Positives = 129/302 (42%), Gaps = 41/302 (13%)
Query: 72 GVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI-PPGVV 130
GVA I +NFP+ + K PAL G V+VKP+ T A + +++G+ P G +
Sbjct: 146 GVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGAL 205
Query: 131 NVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 190
++ G+ D+ D L V + FTGS A KL A + + NA
Sbjct: 206 QLICGSVGDLLDHL-GEQDV--VAFTGSAATAAKLRAHPNIVARSIRF----NA------ 252
Query: 191 DAD-LNVAVNGALAAK------------FRN----SGQTCVCANRVLVQEGIYEKFADAF 233
+AD LN A+ G A R +GQ C R V E + +A
Sbjct: 253 EADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEAL 312
Query: 234 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM---- 289
+ + VGD EGV GPL+++ E V V + A+V+ GG +
Sbjct: 313 KARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVA-TLLAEAEVVFGGPDRFEVVGADA 371
Query: 290 ---TFYEPTVL--SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 344
F+ PT+L + + V E FGPVA L+ + + EAI +A L A + T
Sbjct: 372 EKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVT 431
Query: 345 NN 346
N+
Sbjct: 432 ND 433
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 3e-24
Identities = 83/291 (28%), Positives = 127/291 (43%), Gaps = 20/291 (6%)
Query: 72 GVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI-PPGVV 130
GVA I +NFP + K PAL G V+VKP+ T + + AGI P G +
Sbjct: 150 GVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGAL 209
Query: 131 NVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV-------SLELGGN 183
+VV G++ + D L V +FTGS L + A + V SL
Sbjct: 210 SVVCGSSAGLLDHLQPFDVV---SFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSALL 266
Query: 184 APCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243
P ++ V + SGQ C R+ V E +Y+ A+A + + VG
Sbjct: 267 GPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVG 326
Query: 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL------GMTFYEPTVL 297
+ +GV GPL+++A L V + A+ A+VL G +L PT+L
Sbjct: 327 NPRNDGVRMGPLVSRAQLAAVRAGLA-ALRAQAEVLFDGGGFALVDADPAVAACVGPTLL 385
Query: 298 --SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 346
S+ + V EVFGPVA LL ++ A+ +A L A +++++
Sbjct: 386 GASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDD 436
|
Length = 521 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 5e-24
Identities = 80/282 (28%), Positives = 119/282 (42%), Gaps = 13/282 (4%)
Query: 72 GVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI-PPGVV 130
GVA I +NFP+ + K PA G + KP+ T A A +++G+ P G +
Sbjct: 146 GVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSL 205
Query: 131 NVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV--SLELGGNAPCIV 188
++ G+A D+ D L V FTGS A +L A + + + E I+
Sbjct: 206 QLICGSAGDLLDHLDHRDVV---AFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAIL 262
Query: 189 FDDADLNVAVNGALAAKFRN-----SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243
+DA + A + +GQ C RV+V + + E A + + +G
Sbjct: 263 GEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLG 322
Query: 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSE 303
D EGV GPL++ VE V ++ GA+V LGG G F+ PT+L
Sbjct: 323 DPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRLDG-AFFPPTLLLAEDPW 381
Query: 304 M-LVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 344
V E FGPVA + EA +A L A + T
Sbjct: 382 AGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLAT 423
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 96.5 bits (240), Expect = 7e-22
Identities = 78/321 (24%), Positives = 125/321 (38%), Gaps = 27/321 (8%)
Query: 70 PVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI-PPG 128
P G I +NFPL + ++ ALA G V+VKP + L AG+ PP
Sbjct: 100 PYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPE 159
Query: 129 VVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIV 188
V ++ G+ ALL P + + FTGS+ V +KL A ++ LEL G ++
Sbjct: 160 DVTLINGDG-KTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQA--RIYLELAGFNWKVL 216
Query: 189 FDDADLNVAVNGALAAK-FRNSGQTCVCANRVLVQEGIY-EKFADAFSKAVKNLKVGDGF 246
DA V SGQ C + + V E + + K+ D
Sbjct: 217 GPDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLED-- 274
Query: 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL--GMTFYEPTVLS------ 298
++ GP+ L + G+ +L G+ + Y V S
Sbjct: 275 ---LLLGPVQTFTTLAMIAHMENLL---GSVLLFSGKELKNHSIPSIYGACVASALFVPI 328
Query: 299 --NVKSEMLVSREEVFGPVAPLLCFKTEEEA--IHMANDTNAGLAAYIFTNNLQRTWRVS 354
+K+ LV+ EE+FGP A ++ +K ++ A + + + L A I++N+ +
Sbjct: 329 DEILKTYELVT-EEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELI 387
Query: 355 EALEYGLVGVNEGLISTEVAP 375
L T VAP
Sbjct: 388 GNLWVAGRTYAILRGRTGVAP 408
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 94.5 bits (236), Expect = 4e-21
Identities = 86/283 (30%), Positives = 115/283 (40%), Gaps = 41/283 (14%)
Query: 56 PATLPD-RRLFVLKQPVGVAGAITPWNFPLAMITRKVG----PALACGCTVVVKPSEFTP 110
P PD RR+ V PV V GA NFPLA G ALA GC VVVK P
Sbjct: 93 PLPRPDLRRMLVPLGPVAVFGAS---NFPLAFSV--AGGDTASALAAGCPVVVKAHPAHP 147
Query: 111 LTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166
T+ A A G+P GV +++ G ++G AL+ P ++ + FTGS G+ L
Sbjct: 148 GTSELVARAIRAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALF 207
Query: 167 AGAAG--TVKKVSLELGGNAPCIVFDDADLNVAVNG-ALAAKFRNS-----GQTCVCANR 218
AA ELG P + A +A G A+A F S GQ C
Sbjct: 208 DAAAARPEPIPFYAELGSVNPVFILPGA---LAERGEAIAQGFVGSLTLGAGQFCTNPGL 264
Query: 219 VLVQEGI-YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAK 277
VLV G + F A ++A+ G+ + AL G +
Sbjct: 265 VLVPAGPAGDAFIAALAEALAAAPAQTMLTPGIAEAYRQGVEALAAA---------PGVR 315
Query: 278 VLLGGRRHSLGMTFYEPTVLSNVKSEMLVS----REEVFGPVA 316
VL GG G PT+ V + ++ +EEVFGP +
Sbjct: 316 VLAGGAAAEGGNQ-AAPTLFK-VDAAAFLADPALQEEVFGPAS 356
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 83.8 bits (208), Expect = 2e-17
Identities = 87/300 (29%), Positives = 129/300 (43%), Gaps = 37/300 (12%)
Query: 72 GVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI-PPGVV 130
GVA I +NFP+ + K+ PA G +VKP+ T A L +++G+ P G +
Sbjct: 150 GVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGAL 209
Query: 131 NVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV-------SLELGGN 183
++ G+A D+ D L V +TFTGS A +KL A V SL N
Sbjct: 210 QLICGSAGDLLDHL-DGQDV--VTFTGSAATAQKLRAHPNVVANSVPFTAEADSL----N 262
Query: 184 APCIVFDDA-------DLNV-AVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSK 235
A I+ DA DL V V + K +GQ C R +V + + +A
Sbjct: 263 A-AILGPDATPGTPEFDLFVKEVVREMTVK---AGQKCTAIRRAIVPRALVDAVIEALRA 318
Query: 236 AVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM------ 289
+ + VGD EGV G L + E V V A+ A+++ GG +
Sbjct: 319 RLAKVVVGDPRLEGVRMGALASLEQREDVREKV-AALLAAAEIVFGGPDSFEVVGADAEK 377
Query: 290 -TFYEPTVLS--NVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 346
F+ PT+L + V E FGPV+ L+ + +EAI +A L A + T +
Sbjct: 378 GAFFPPTLLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTAD 437
|
Length = 675 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 59.8 bits (146), Expect = 9e-10
Identities = 75/311 (24%), Positives = 121/311 (38%), Gaps = 69/311 (22%)
Query: 69 QPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL----ALQAG 124
+PVGV A+ P P + K AL ++ P ++ AA++ A+ AG
Sbjct: 94 EPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAG 153
Query: 125 IPPGVVNVVMGNAPDI--GDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG- 181
P G++ + P I L+ P V I TG M AA + K ++ +G
Sbjct: 154 APEGLIQWI--EEPSIELTQELMKHPDVDLILATGGPG-----MVKAAYSSGKPAIGVGP 206
Query: 182 GNAPCIVFDDADLNVAVNGALAAK-FRNSGQTCVCA--NRVLVQEGIYEKFADAFSKAVK 238
GN P + + AD+ AV + +K F N +CA V+V + IY++ +
Sbjct: 207 GNVPAYIDETADIKRAVKDIILSKTFDNG---TICASEQSVIVDDEIYDEVRAELKR--- 260
Query: 239 NLKVGDGFGEGVVQGPLINKAALEKVETFVE--------DAVSKGAKVLLGGRRHSLGMT 290
G +N+ EK+E + D V K A+ + G+
Sbjct: 261 ---------RGAY---FLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAEL----AGIE 304
Query: 291 FYEPTVLSNVKSEMLVSREEVFGP--------VAPLLCF---KTEEEAIHMAND--TNAG 337
E T + LV+ E GP ++P+L F + EEA+ A + G
Sbjct: 305 VPEDTKV-------LVAEETGVGPEEPLSREKLSPVLAFYRAEDFEEALEKARELLEYGG 357
Query: 338 LA--AYIFTNN 346
A I +N+
Sbjct: 358 AGHTAVIHSND 368
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
| >gnl|CDD|143445 cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Score = 58.3 bits (141), Expect = 3e-09
Identities = 67/257 (26%), Positives = 104/257 (40%), Gaps = 28/257 (10%)
Query: 94 ALACGCTVVVKPSEFTPL----TALAAAELALQAGIPPGVVNVVMGNAPD-IGDALLTSP 148
+LA G V+VKP L T A E+ +AG P +V + + I L T P
Sbjct: 217 SLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRP 276
Query: 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR- 207
+VR I FTGS A G L A A +V E G +V D D A+ LA
Sbjct: 277 EVRIIDFTGSNAFGDWLEANARQ--AQVYTEKAGVNTVVV-DSTDDLKAMLRNLAFSLSL 333
Query: 208 NSGQTCVCANRVLV-QEGI--------YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINK 258
SGQ C + V ++GI +++ A + A+ L + D + G + +
Sbjct: 334 YSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-LADPARAAALLGAIQSP 392
Query: 259 AALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGP 314
L ++ + +VLL + P +L S+ EE FGP
Sbjct: 393 DTLARIA-----EARQLGEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGP 447
Query: 315 VAPLLCFKTEEEAIHMA 331
+A ++ + + +I +A
Sbjct: 448 IAFVVATDSTDHSIELA 464
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. Length = 549 |
| >gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 7e-08
Identities = 72/266 (27%), Positives = 108/266 (40%), Gaps = 28/266 (10%)
Query: 70 PVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT----PLTALAAAELALQAGI 125
P G+A I FP + +LA G V+VKP LT A E+ +AG
Sbjct: 193 PRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGF 252
Query: 126 PPGVVNVVMGNA-PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNA 184
P +V + + + L T P VR I FTGS A G+ L A +V E G
Sbjct: 253 DPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNARQA--QVYTEKAGVN 310
Query: 185 PCIVFDDADLN-VAVNGALAAKFRNSGQTCVCANRVLV-QEGI--------YEKFADAFS 234
I+ D + N A + SGQ C +LV ++GI Y++ A +
Sbjct: 311 TVIIESTDDYKAMLRNLAFSLSLY-SGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLA 369
Query: 235 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMT 290
A+ L +GD V G + + L + + +A + G +VLL + G
Sbjct: 370 TAIDGL-LGDPARATAVLGAIQSPDTLAR----IAEARALG-EVLLASTKIEHPEFPGAR 423
Query: 291 FYEPTVLSNVKSEMLVSREEVFGPVA 316
P +L ++ +E FGP+A
Sbjct: 424 VRTPLLLKCDAADEAAYMQERFGPIA 449
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 2e-07
Identities = 78/284 (27%), Positives = 117/284 (41%), Gaps = 50/284 (17%)
Query: 70 PVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGV 129
P G ITP+NFPL + ++ AL G ++K + L G+P
Sbjct: 142 PYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATD 201
Query: 130 VNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGN-----A 184
V+++ + P + LL + R FTGS+ V ++L A KV LE G
Sbjct: 202 VDLIHSDGPTMNKILLEA-NPRMTLFTGSSKVAERL---ALELHGKVKLEDAGFDWKILG 257
Query: 185 PCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL------VQEGIYEKFAD-AFSKAV 237
P + D A A SGQ C A +L VQ GI +K A + +
Sbjct: 258 PDVSDVDYVAWQCDQDAYAC----SGQKC-SAQSILFAHENWVQAGILDKLKALAEQRKL 312
Query: 238 KNLKVGDGFGEGVVQGPLI---NKAALEKVETFVEDAVSKGAKVLLGGR---RHSLGMTF 291
++L + GP++ + L+ V+ + GAKVL GG+ HS+ +
Sbjct: 313 EDLTI----------GPVLTWTTERILDHVDKLLA---IPGAKVLFGGKPLTNHSIPSIY 359
Query: 292 --YEPTV----LSNVKSEM---LVSREEVFGPVAPLLCFKTEEE 326
YEPT L + E LV+ EVFGP + +K E+
Sbjct: 360 GAYEPTAVFVPLEEIAIEENFELVTT-EVFGPFQVVTEYKDEQL 402
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 51.9 bits (125), Expect = 3e-07
Identities = 72/299 (24%), Positives = 111/299 (37%), Gaps = 43/299 (14%)
Query: 70 PVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL----ALQAGI 125
P GV GAITP P I LA G VV P + A EL +AG
Sbjct: 97 PFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGG 156
Query: 126 PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAP 185
P +V V + + L+ P + + TG AV K ++ + KK GN P
Sbjct: 157 PDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALS----SGKKAIGAGAGNPP 212
Query: 186 CIVFDDADL-NVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244
+V + AD+ A + A F N+ C+ V+ + + + A +
Sbjct: 213 VVVDETADIEKAARDIVQGASFDNN-LPCIAEKEVIAVDSVADYLIAAMQR--------- 262
Query: 245 GFGEGVVQGPLINKAALEKVETFVEDA---------VSKGAKVLLGGRRHSLGMTFYEPT 295
G L ++ A + +E + V K A +L + G+
Sbjct: 263 ---NGAYV--LNDEQAEQLLEVVLLTNKGATPNKKWVGKDASKILK----AAGIEVPADI 313
Query: 296 VLSNV---KSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL--AAYIFTNNLQR 349
L V K V EE P+ P++ K +EAI +A + G A I + N++
Sbjct: 314 RLIIVETDKDHPFVV-EEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVEN 371
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 8e-07
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 10/170 (5%)
Query: 69 QPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPG 128
+P+GV +ITP P + + K +L +++ P AA L LQA + G
Sbjct: 94 EPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAG 153
Query: 129 VVNVVMG--NAPDI--GDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GN 183
++G + P I L+ P + + TG AV K AA + K ++ +G GN
Sbjct: 154 APENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAVVK-----AAYSSGKPAIGVGAGN 208
Query: 184 APCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 233
P ++ + AD+ AV + +K ++G C V+V + +Y++ F
Sbjct: 209 TPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEVMRLF 258
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|237956 PRK15398, PRK15398, aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Score = 48.7 bits (117), Expect = 3e-06
Identities = 75/307 (24%), Positives = 113/307 (36%), Gaps = 61/307 (19%)
Query: 70 PVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL----ALQAGI 125
P GV GA+TP P I LA G +VV P +L A EL + AG
Sbjct: 129 PFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAAGG 188
Query: 126 PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAP 185
P +V V + L+ P + + TG AV K M + KK GN P
Sbjct: 189 PENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGNPP 244
Query: 186 CIVFDDADLNVA----VNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 241
+V + AD+ A V G A F N+ C+ V+V + + ++ K
Sbjct: 245 VVVDETADIEKAARDIVKG---ASFDNN-LPCIAEKEVIVVDSVADELMRLMEK------ 294
Query: 242 VGDGFGEGVVQGPLINKAALEKVETFV--------EDAVSKGAKVLLGGRRHSLGMTFYE 293
G V + EK++ V + V K A +L G+ +
Sbjct: 295 ------NGAVL---LTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILEA----AGINVPK 341
Query: 294 PTVL---------SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL--AAYI 342
T L V +E+++ PV P++ K +EAI +A G A +
Sbjct: 342 DTRLLIVETDANHPFVVTELMM-------PVLPVVRVKDVDEAIALAVKLEHGNRHTAIM 394
Query: 343 FTNNLQR 349
+ N+
Sbjct: 395 HSRNVDN 401
|
Length = 465 |
| >gnl|CDD|237515 PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.2 bits (108), Expect = 6e-05
Identities = 55/214 (25%), Positives = 90/214 (42%), Gaps = 45/214 (21%)
Query: 70 PVGVAGAITPWNFP---------LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL- 119
PVGV ITP P +A+ TR ++ +++AAA++
Sbjct: 108 PVGVIAGITPTTNPTSTAIFKALIALKTR---------NPIIFSFHPRAQKSSIAAAKIV 158
Query: 120 ---ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 176
A+ AG P ++ + + ++ +AL+ P + I TG M AA + K
Sbjct: 159 LDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPG-----MVKAAYSSGKP 213
Query: 177 SLELG-GNAPCIVFDDADLNVAVNGALAAK-FRNSGQTCVCANRVLVQEGIYEKFADAFS 234
+L +G GN P + AD+ AVN L +K F N G C V+V + IY++ + F+
Sbjct: 214 ALGVGAGNVPAYIDKTADIKRAVNDILLSKTFDN-GMICASEQAVIVDDEIYDEVKEEFA 272
Query: 235 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 268
+NK L+K+E F+
Sbjct: 273 SH---------------GAYFLNKKELKKLEKFI 291
|
Length = 862 |
| >gnl|CDD|131570 TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 6e-05
Identities = 36/180 (20%), Positives = 71/180 (39%), Gaps = 10/180 (5%)
Query: 61 DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL- 119
++++ + PVGV + P P + K ++ +V P + +L
Sbjct: 95 EKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLM 154
Query: 120 ---ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 176
A +AG P G + + + + L+ + I TG A M AA +
Sbjct: 155 RKAAEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEA-----MVKAAYSSGTP 209
Query: 177 SLELG-GNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSK 235
++ +G GN P + A++ AV + +K ++G C ++V+E + + K
Sbjct: 210 AIGVGPGNGPAYIERTANVKKAVRDIIDSKTFDNGTICASEQSIIVEECNKDAVVEELKK 269
|
Length = 488 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 4e-04
Identities = 46/192 (23%), Positives = 68/192 (35%), Gaps = 18/192 (9%)
Query: 49 RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 108
+ ++P +V P+GV I P PL+ IT +A + +P
Sbjct: 82 HIQDVLLPDNG---ETYVRAFPIGVTMHILPSTNPLSGIT-SALRGIATRNQCIFRPHPS 137
Query: 109 TPLTALAAAELALQAGIPPGVVN--VVMGNAPDI--GDALLTSPQVRKITFTGSTAVGKK 164
P T A A L QA V+ P + LL+ P++ I TG
Sbjct: 138 APFTNRALA-LLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDA 196
Query: 165 LMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR-----NSGQTCVCANRV 219
A V GN+P +V + AD A +KF S Q + V
Sbjct: 197 --AVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFDQNACASEQNLYVVDDV 254
Query: 220 LVQEGIYEKFAD 231
L + +YE+F
Sbjct: 255 L--DPLYEEFKL 264
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 410 | |||
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 100.0 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.89 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.8 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.55 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.44 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.64 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 97.7 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 97.56 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 97.55 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 97.53 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 97.48 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 97.47 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 97.45 | |
| PLN02926 | 431 | histidinol dehydrogenase | 97.38 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 97.2 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 97.14 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 92.3 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 88.46 |
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-90 Score=701.07 Aligned_cols=398 Identities=57% Similarity=0.989 Sum_probs=375.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++++|+||++.+++.|+..+++.++|++..+.+..++..+...++...+++++|+|||++|+|||||+...
T Consensus 84 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 163 (482)
T PRK11241 84 MEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMI 163 (482)
T ss_pred HHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHH
Confidence 45566789999999999999999999999999999999887766554433233455788999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.||+++.|+||||+++|+.|.+
T Consensus 164 ~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~ 243 (482)
T PRK11241 164 TRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLME 243 (482)
T ss_pred HHHHHHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877778999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+
T Consensus 244 ~aa~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~ 323 (482)
T PRK11241 244 QCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLE 323 (482)
T ss_pred HHHhcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ea 327 (410)
+++++||++++.+++++.++|++++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|.|||
T Consensus 324 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~ea 403 (482)
T PRK11241 324 KGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADV 403 (482)
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHH
Confidence 99999999999999999999999999999999999754235799999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 328 i~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
|+++|+++|||++||||+|.++++++++++++|+||||+.....+.+||||+|.||+|+++|.+|+++||+.|+|++.
T Consensus 404 i~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~~ 481 (482)
T PRK11241 404 IAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 481 (482)
T ss_pred HHHhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccCcccHHHHHHHhhcceEEEEe
Confidence 999999999999999999999999999999999999998877666789999999999999999999999999998764
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-92 Score=678.40 Aligned_cols=397 Identities=45% Similarity=0.697 Sum_probs=378.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
++++..++..-+.+.|||+.+++ .++..+++.+|||+.+++...+...+. ..+...|+.++|+|||+.|.|||||+..
T Consensus 96 e~~~~~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~-~~~~~~yt~~eP~GV~G~I~pWN~Pllm 174 (501)
T KOG2450|consen 96 EQDADVLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPT-DGEFFAYTRREPIGVCGQIIPWNFPLLM 174 (501)
T ss_pred HhhhHHHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCC-CCceEEEecCCcceeeeEeccCchHHHH
Confidence 34555567777788999999999 899999999999999999886655443 3466789999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
..|+++|||++||+||+||++++|.++..+++++.++|+|+|++|+++|.+...+.+|.+|++|+.|+||||+.+|+.|+
T Consensus 175 ~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~ 254 (501)
T KOG2450|consen 175 QAWKLAPALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIM 254 (501)
T ss_pred HHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcc-ccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhh-cccCC
Q 015249 167 AGAAG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVGD 244 (410)
Q Consensus 167 ~~~~~-~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~-~~~g~ 244 (410)
..+++ ++|++++|+|||+|.||++|+|++.|++.+..+.|+|+||.|.+.+|+|||+++||+|+++++++.++ +++||
T Consensus 255 ~aaa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGd 334 (501)
T KOG2450|consen 255 EAAAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGD 334 (501)
T ss_pred hhhhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCC
Confidence 98885 48999999999999999999999999999999999999999999999999999999999999999966 99999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 245 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 245 ~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
|.++.+.+||.+++.|++++..+|+.++++|+++++||.+....|+|++|||+.++.++|.+++||+||||+.|++|++.
T Consensus 335 P~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~ 414 (501)
T KOG2450|consen 335 PFDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTE 414 (501)
T ss_pred CCCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcH
Confidence 99999999999999999999999999999999999999875467999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
||+|+++|+++|||++.|||+|.+++.++++++++|+||||+....+...||||+|+||+||+.|.+++++||+.|+|++
T Consensus 415 eE~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~v 494 (501)
T KOG2450|consen 415 EEVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVTV 494 (501)
T ss_pred HHHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCCccccHHHHhhcceeeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred e
Q 015249 405 G 405 (410)
Q Consensus 405 ~ 405 (410)
+
T Consensus 495 ~ 495 (501)
T KOG2450|consen 495 K 495 (501)
T ss_pred e
Confidence 6
|
|
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-90 Score=639.44 Aligned_cols=401 Identities=65% Similarity=1.010 Sum_probs=386.3
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~ 88 (410)
++++++++.+..|.|||+.+|++||..+..+++||+..+.+..+...+...+..+..+.++|+||+++|+|||||.....
T Consensus 98 en~ddLa~iiTlE~GKpL~eA~gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMIt 177 (503)
T KOG2451|consen 98 ENKDDLATIITLENGKPLGEAKGEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMIT 177 (503)
T ss_pred hchHHHHHHHhhhcCCchhhccceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHH
Confidence 45567799999999999999999999999999999999999999988766678888899999999999999999999999
Q ss_pred hhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCC---chhHHhHHhcCCCccEEEEeCcHHHHHHH
Q 015249 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGN---APDIGDALLTSPQVRKITFTGSTAVGKKL 165 (410)
Q Consensus 89 ~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~---~~~~~~~l~~~~~v~~v~ftGs~~~~~~i 165 (410)
.+..+||++||+||+||+..+|+++..++++..+||+|+|++|+++.+ ..+.+..|+.+|+|+.|+||||+.+|+.+
T Consensus 178 RK~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL 257 (503)
T KOG2451|consen 178 RKAGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKIL 257 (503)
T ss_pred hHHHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHH
Confidence 999999999999999999999999999999999999999999999963 34689999999999999999999999999
Q ss_pred HHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 166 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 166 ~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
+.+.+.+.|++.+||||+.|+||++|+|+|.|++.....+|.++||.|.++.|+|||+++||+|+..|.++++++++||.
T Consensus 258 ~~qsastvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG 337 (503)
T KOG2451|consen 258 MAQSASTVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDG 337 (503)
T ss_pred HHhhhhhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~-~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
++++++.||+++..+.+++..++++|+.+|+++++||.... .+.+|++|||+.+++.+|-+.+||+|||+.+|++|+|.
T Consensus 338 ~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdte 417 (503)
T KOG2451|consen 338 LDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTE 417 (503)
T ss_pred CCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCH
Confidence 99999999999999999999999999999999999998544 56799999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
||+|+++|+++.||+.|+||+|.++..++++++++|+|.+|.....+...||||+|+||+||+++++|+++|+..|.+++
T Consensus 418 eEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~GREgskyGidey~~ik~ici 497 (503)
T KOG2451|consen 418 EEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFGREGSKYGIDEYLVIKYICI 497 (503)
T ss_pred HHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccCccccccchhhhhhhheeee
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred eccCC
Q 015249 405 GDMNR 409 (410)
Q Consensus 405 ~~~~~ 409 (410)
..++.
T Consensus 498 g~L~~ 502 (503)
T KOG2451|consen 498 GTLPI 502 (503)
T ss_pred cCccC
Confidence 98765
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-89 Score=685.86 Aligned_cols=395 Identities=50% Similarity=0.817 Sum_probs=374.2
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
+++++++++++.+|+|||+.+++.|+..+++.++|++..++++.+...+.. .+...++.++|+|||++|+|||||++..
T Consensus 72 ~~~~~ela~~~~~e~Gk~i~ea~~ei~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwNfP~~~~ 150 (472)
T COG1012 72 EARAEELAALITLETGKPISEARGEIARAADFIRYYAEEARRLEGETIPTD-KGSKALVRREPLGVVGAITPWNFPLALA 150 (472)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCC-CCcceEEEeecceEEEEECCCCCHHHHH
Confidence 445566799999999999999999999999999999999988777653322 2678899999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.+..|+.||+|++|+||||+.+|+.|.+
T Consensus 151 ~~k~apALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~ 230 (472)
T COG1012 151 AWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAA 230 (472)
T ss_pred HhhHHHHHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977779999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhh-cccCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVGDGF 246 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~-~~~g~~~ 246 (410)
.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|.++ ++ +++|||.
T Consensus 231 ~Aa~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~ 309 (472)
T COG1012 231 AAAANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPL 309 (472)
T ss_pred HHhhcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 65 9999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 326 (410)
|+.+++||++++.++++++.+|++++++|++++.||... +|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 310 d~~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~--~g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dE 387 (472)
T COG1012 310 DPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRP--GGYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEE 387 (472)
T ss_pred CCCCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcCC--CCeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHH
Confidence 999999999999999999999999999999999999833 389999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 015249 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 327 ai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
||+++|+++|||+++|||+|..++.++++++++|+|+||+... ..+.+||||+|.||+|+++|.+++++|++.|+|.+
T Consensus 388 Ai~lAN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~ 467 (472)
T COG1012 388 AIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTI 467 (472)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEE
Confidence 9999999999999999999999999999999999999998863 45779999999999999999999999999999988
Q ss_pred ec
Q 015249 405 GD 406 (410)
Q Consensus 405 ~~ 406 (410)
+.
T Consensus 468 ~~ 469 (472)
T COG1012 468 KL 469 (472)
T ss_pred ec
Confidence 74
|
|
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-88 Score=674.36 Aligned_cols=398 Identities=41% Similarity=0.680 Sum_probs=375.0
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++.+|+||++.+++.|+..+++.++|++.++....+...+...++...+++++|+|||++|+|||||+...
T Consensus 9 ~~~~~el~~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~ 88 (409)
T PRK10090 9 RERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLI 88 (409)
T ss_pred HHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEECCCchHHHHH
Confidence 34456779999999999999999999999999999999988766544332223456789999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.|++++.|.||||+.+|+.|.+
T Consensus 89 ~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~ 168 (409)
T PRK10090 89 ARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMA 168 (409)
T ss_pred HHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977778999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+||+||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.+
T Consensus 169 ~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~ 248 (409)
T PRK10090 169 AAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAE 248 (409)
T ss_pred HHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHH
Q 015249 248 E-GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326 (410)
Q Consensus 248 ~-~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 326 (410)
+ ++++||++++.+++++.++|++++++|+++++||...+..++|++|||+.++++++++++||+||||++|++|+|++|
T Consensus 249 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~e 328 (409)
T PRK10090 249 RNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEE 328 (409)
T ss_pred cccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceEEEEEECCHHH
Confidence 8 999999999999999999999999999999999976533478999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 327 ai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
||+++|+++|||+++|||+|.+.++++++++++|+|+||+.....+..||||+|+||+|+++|.+|+++||+.|+++++
T Consensus 329 ai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~gl~~f~~~k~v~~~ 407 (409)
T PRK10090 329 AIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 407 (409)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCccchHHHHHHhcceEEEEEe
Confidence 9999999999999999999999999999999999999999877666789999999999999999999999999999875
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-88 Score=689.38 Aligned_cols=396 Identities=30% Similarity=0.437 Sum_probs=371.2
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~ 88 (410)
+++.++++++++|+|||+.+++.||..+++.++|++.++....++..+....+...+++++|+|||++|+|||||+...+
T Consensus 188 ~~~~ela~~~~~E~GKp~~ea~~EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~ 267 (604)
T PLN02419 188 KNMDKLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPL 267 (604)
T ss_pred HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECCCccHHHHHH
Confidence 34566799999999999999999999999999999999887766544322235567889999999999999999999999
Q ss_pred hhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHH
Q 015249 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 168 (410)
Q Consensus 89 ~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~ 168 (410)
+++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|+ .+.+..|+.|++|+.|+||||+.+|+.|++.
T Consensus 268 ~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~-~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~ 346 (604)
T PLN02419 268 WMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGT-NDTVNAICDDEDIRAVSFVGSNTAGMHIYAR 346 (604)
T ss_pred HHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCC-hHHHHHHHhCCCCCEEEEeCChHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999985 4678899999999999999999999999999
Q ss_pred hccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCCC
Q 015249 169 AAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 248 (410)
Q Consensus 169 ~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~ 248 (410)
++++++|+++|+||+||+||++|||++.|++.+++++|.|+||.|++++|||||++ +|+|+++|+++++++++|+|.|+
T Consensus 347 Aa~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~ 425 (604)
T PLN02419 347 AAAKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEP 425 (604)
T ss_pred HhccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999 89999999999999999999999
Q ss_pred CccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc---C-CCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 249 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH---S-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 249 ~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~---~-~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
++++||++++.+++++.++|++++++|+++++||... + .+|+|++|||+.+++++|.+++||+||||++|++|+|.
T Consensus 426 ~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~ 505 (604)
T PLN02419 426 DADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSF 505 (604)
T ss_pred CCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCH
Confidence 9999999999999999999999999999999999752 1 35899999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCCCCCCCC--CCChHHHHHhhheeeE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLG--REGSKYGMDEFLEIKY 401 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pfGg~~~SG~g--~~~g~~~l~~~~~~k~ 401 (410)
||||+++|+++|||++||||+|.++++++++++++|.|+||+... ..+.+||||+|.||+| +++|.+++++|++.|+
T Consensus 506 dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~K~ 585 (604)
T PLN02419 506 DEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKL 585 (604)
T ss_pred HHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCeEE
Confidence 999999999999999999999999999999999999999998743 3467999999999999 7899999999999999
Q ss_pred EEEec
Q 015249 402 VCLGD 406 (410)
Q Consensus 402 v~~~~ 406 (410)
|+++.
T Consensus 586 v~~~~ 590 (604)
T PLN02419 586 VTQKQ 590 (604)
T ss_pred EEEcc
Confidence 98864
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-87 Score=684.26 Aligned_cols=399 Identities=41% Similarity=0.646 Sum_probs=374.5
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
.+++.++++++++|+|||+.+++ .|+..+++.++|++....+..++..... .+...++.++|+|||++|+|||||+..
T Consensus 96 ~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~ 174 (501)
T PLN02766 96 EEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMS-RQLQGYTLKEPIGVVGHIIPWNFPSTM 174 (501)
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccC-CCceEEEEeccceEEEEECCCCChHHH
Confidence 34456679999999999999998 5999999999999998877766533221 334567899999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.||+++.|.||||+.+|+.|.
T Consensus 175 ~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~ 254 (501)
T PLN02766 175 FFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIM 254 (501)
T ss_pred HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997778899999999999999999999999999
Q ss_pred HHhc-cccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 167 AGAA-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 167 ~~~~-~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
+.++ ++++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 255 ~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p 334 (501)
T PLN02766 255 QAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDP 334 (501)
T ss_pred HHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 9998 589999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
.++++++||++++.+++++.++|++++.+|+++++||......++|++|||+.+++++|++++||+||||++|++|+|.|
T Consensus 335 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~d 414 (501)
T PLN02766 335 FDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVE 414 (501)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHH
Confidence 99999999999999999999999999999999999997643457999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
|||+++|+++|||+++|||+|.+++.++++++++|+|+||+.....+.+||||+|.||+|+++|++++++||+.|+|++.
T Consensus 415 eai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 494 (501)
T PLN02766 415 EAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTP 494 (501)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEe
Confidence 99999999999999999999999999999999999999998777778899999999999999999999999999999886
Q ss_pred cc
Q 015249 406 DM 407 (410)
Q Consensus 406 ~~ 407 (410)
..
T Consensus 495 ~~ 496 (501)
T PLN02766 495 LY 496 (501)
T ss_pred cc
Confidence 53
|
|
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-87 Score=683.94 Aligned_cols=401 Identities=80% Similarity=1.217 Sum_probs=377.5
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
.+++..+++++++|+||++.+++.|+..+++.++|++.......+...+...++...+++++|+|||++|+|||||++..
T Consensus 98 ~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~ 177 (498)
T PLN02278 98 IANKEDLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMI 177 (498)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECCCccHHHHH
Confidence 34556779999999999999999999999999999999987776654433333456678899999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|.+
T Consensus 178 ~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~ 257 (498)
T PLN02278 178 TRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMA 257 (498)
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877778899999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++++|+++|+++++++++|+|.+
T Consensus 258 ~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~ 337 (498)
T PLN02278 258 GAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFE 337 (498)
T ss_pred HHhhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ea 327 (410)
+++++||++++.+++++.++|++++++|+++++||...+.+++|++|||+.++++++++++||+||||++|++|+|.|||
T Consensus 338 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~dea 417 (498)
T PLN02278 338 EGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEA 417 (498)
T ss_pred CCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHH
Confidence 99999999999999999999999999999999999764335799999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEecc
Q 015249 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 407 (410)
Q Consensus 328 i~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~~~ 407 (410)
|+++|+++|||+++|||+|.+.++++++++++|+||||+.....+.+||||+|.||+|+++|++|+++||+.|+|.+++|
T Consensus 418 i~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~~~ 497 (498)
T PLN02278 418 IAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYVCLGNM 497 (498)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhheeEEEEEecC
Confidence 99999999999999999999999999999999999999877666789999999999999999999999999999999877
Q ss_pred C
Q 015249 408 N 408 (410)
Q Consensus 408 ~ 408 (410)
+
T Consensus 498 ~ 498 (498)
T PLN02278 498 N 498 (498)
T ss_pred C
Confidence 5
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-86 Score=674.78 Aligned_cols=397 Identities=36% Similarity=0.615 Sum_probs=371.2
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
.+++.++++++++|+|||+.+++ .|+..+++.++|++.....+.++..+....+...++.++|+|||++|+|||||+..
T Consensus 74 ~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 153 (472)
T TIGR03374 74 EENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMM 153 (472)
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHH
Confidence 34456679999999999999997 59999999999999888766554322222345678999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+.+++.+. +|+|++|+++|++.+.+..|+.||+++.|.||||+++|+.|+
T Consensus 154 ~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~ 232 (472)
T TIGR03374 154 AAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHIL 232 (472)
T ss_pred HHHHHHHHHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 9999999999999999999999999999999999885 999999999997778899999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.++++++|+++|+||+||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus 233 ~~aa~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~ 312 (472)
T TIGR03374 233 SHTAPSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPD 312 (472)
T ss_pred HHHhhcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCC-CeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKG-AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~g-a~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
++++++||++++.+++++.++|++++++| +++++||...+..++|+.|||+.+++++|++++||+||||++|++|+|.|
T Consensus 313 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~ 392 (472)
T TIGR03374 313 DESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEE 392 (472)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHH
Confidence 99999999999999999999999999999 79999997643347899999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
||++++|+++|||++||||+|.++++++++++++|+|+||+.....+.+||||+|.||+|+++|++++++||+.|+++++
T Consensus 393 eai~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~~ 472 (472)
T TIGR03374 393 QVVNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMVK 472 (472)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccCccchHHHHHHhhceEEEEEC
Confidence 99999999999999999999999999999999999999999877778899999999999999999999999999998764
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-86 Score=675.40 Aligned_cols=398 Identities=36% Similarity=0.634 Sum_probs=372.2
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCCC--C-CcceeEEeeeceEEEEEcCCCcc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPATL--P-DRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
.+++.++++++.+|+||++.++. .|+..+++.++|++.+.++..++..+... + +...+.+++|+|||++|+|||||
T Consensus 81 ~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P 160 (486)
T cd07140 81 EEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYP 160 (486)
T ss_pred HHhHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchH
Confidence 34456678999999999999997 69999999999999988777655433211 1 22467899999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.||+|+.|.||||+.+|+
T Consensus 161 ~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~ 240 (486)
T cd07140 161 LMMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGK 240 (486)
T ss_pred HHHHHHHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHH
Confidence 99999999999999999999999999999999999999999999999999997778889999999999999999999999
Q ss_pred HHHHHhcc-ccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhccc
Q 015249 164 KLMAGAAG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 242 (410)
Q Consensus 164 ~i~~~~~~-~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~ 242 (410)
.|.+.++. +++|+++|+||+||+||++|+|++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++++
T Consensus 241 ~i~~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~ 320 (486)
T cd07140 241 HIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKI 320 (486)
T ss_pred HHHHHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCc
Confidence 99999986 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 243 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 243 g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
|+|.++++++||++++.+++++.++|++++++|+++++||...+.+|+|++|||+.++++++++++||+||||++|++|+
T Consensus 321 g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~ 400 (486)
T cd07140 321 GDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFD 400 (486)
T ss_pred cCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcC
Confidence 99999999999999999999999999999999999999997543457999999999999999999999999999999999
Q ss_pred --CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheee
Q 015249 323 --TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400 (410)
Q Consensus 323 --~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k 400 (410)
|++|||+++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|+||+|+++|++++++||+.|
T Consensus 401 ~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k 480 (486)
T cd07140 401 DGDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTK 480 (486)
T ss_pred CCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhcEE
Confidence 699999999999999999999999999999999999999999998777778999999999999999999999999999
Q ss_pred EEEEe
Q 015249 401 YVCLG 405 (410)
Q Consensus 401 ~v~~~ 405 (410)
+|+++
T Consensus 481 ~v~~~ 485 (486)
T cd07140 481 TVTIE 485 (486)
T ss_pred EEEEe
Confidence 99874
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-86 Score=677.84 Aligned_cols=398 Identities=41% Similarity=0.629 Sum_probs=374.1
Q ss_pred HHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
+++.++++++.+|+||++.+++ .|+..+++.++|++.+.++..++..+.. .+...++.++|+|||++|+|||||+...
T Consensus 134 ~~~~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~l~ 212 (538)
T PLN02466 134 KHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPAD-GPHHVQTLHEPIGVAGQIIPWNFPLLMF 212 (538)
T ss_pred HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEecceEEEEECCCchHHHHH
Confidence 3456779999999999999996 5999999999999999887766544322 2345688999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.||+++.|.||||+.+|+.|++
T Consensus 213 ~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~ 292 (538)
T PLN02466 213 AWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLE 292 (538)
T ss_pred HHHHhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977778899999999999999999999999999
Q ss_pred Hhcc-ccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 168 GAAG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 168 ~~~~-~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
.+++ +++|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|++++.++++|+|.
T Consensus 293 ~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~ 372 (538)
T PLN02466 293 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPF 372 (538)
T ss_pred HHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCc
Confidence 9884 889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 326 (410)
++++++||++++.+++++.+++++++++|+++++||...+..++|++|||+.+++++|++++||+||||++|++|+|.||
T Consensus 373 ~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~de 452 (538)
T PLN02466 373 KKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDE 452 (538)
T ss_pred cCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHH
Confidence 99999999999999999999999999999999999976434578999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 015249 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 406 (410)
Q Consensus 327 ai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 406 (410)
||+++|+++|||+++|||+|.+++.++++++++|+|+||+....++.+||||+|.||+|+++|.+|+++|++.|+|++..
T Consensus 453 Ai~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~ 532 (538)
T PLN02466 453 VIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPL 532 (538)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccCcccHHHHHHHhcceEEEEEeC
Confidence 99999999999999999999999999999999999999987777788999999999999999999999999999998864
Q ss_pred c
Q 015249 407 M 407 (410)
Q Consensus 407 ~ 407 (410)
+
T Consensus 533 ~ 533 (538)
T PLN02466 533 K 533 (538)
T ss_pred C
Confidence 3
|
|
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-86 Score=670.00 Aligned_cols=392 Identities=64% Similarity=1.020 Sum_probs=369.7
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~ 88 (410)
+++.++++++.+|+||++.+++.|+..+++.++|++....+..+...+....+...+..++|+|||++|+|||||++..+
T Consensus 56 ~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~ 135 (448)
T TIGR01780 56 ENKDDLARLITLENGKPLKEAKGEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMIT 135 (448)
T ss_pred HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHH
Confidence 44566799999999999999999999999999999988877766544332345566788999999999999999999999
Q ss_pred hhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCC-chhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGN-APDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 89 ~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~-~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
+++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++++ +.+.+..|+.||+++.|.||||+.+|+.|.+
T Consensus 136 ~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~ 215 (448)
T TIGR01780 136 RKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMK 215 (448)
T ss_pred HHHHHHHHcCCeEeeECCccchHHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999986 5778899999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++.+.+|+++|+||+||+||++|+|++.+++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.+
T Consensus 216 ~aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~ 295 (448)
T TIGR01780 216 QSASTVKKVSMELGGNAPFIVFDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLD 295 (448)
T ss_pred HHhhcCCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ea 327 (410)
+++++||++++.+++++.++|++++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|.+||
T Consensus 296 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~ea 375 (448)
T TIGR01780 296 EGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEV 375 (448)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHH
Confidence 99999999999999999999999999999999999764335789999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheee
Q 015249 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400 (410)
Q Consensus 328 i~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k 400 (410)
++++|+++|||+++|||+|.+.++++++++++|.||||+....++.+||||+|.||+|+++|.+++++||+.|
T Consensus 376 i~~an~~~~gL~~~vfs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 376 IAIANDTEVGLAAYFFSRDLATIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448 (448)
T ss_pred HHHHhCCCcCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence 9999999999999999999999999999999999999998776778999999999999999999999999876
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-86 Score=673.36 Aligned_cols=397 Identities=37% Similarity=0.617 Sum_probs=371.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHHHHHHhCccccCC-----CCCcceeEEeeeceEEEEEcCCC
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLR-EVDYGAKFIEFYAEEAKRVYGEIIPAT-----LPDRRLFVLKQPVGVAGAITPWN 81 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~P~Gvv~~i~p~n 81 (410)
++++.++++++++|+||++.+++. |+..+++.++|++.+.....++..+.. ..+...+++++|+|||++|+|||
T Consensus 74 ~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N 153 (477)
T cd07113 74 EQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWN 153 (477)
T ss_pred HHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCC
Confidence 345567799999999999999985 999999999999998877655433211 11235678999999999999999
Q ss_pred cchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHH
Q 015249 82 FPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 161 (410)
Q Consensus 82 ~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~ 161 (410)
||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++. .+..|+.||+++.|.||||+.+
T Consensus 154 ~P~~~~~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V~fTGS~~~ 232 (477)
T cd07113 154 FSVMIAVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKVSFTGSVAT 232 (477)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEEEEECcHHH
Confidence 999999999999999999999999999999999999999999999999999998765 8899999999999999999999
Q ss_pred HHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcc
Q 015249 162 GKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 241 (410)
Q Consensus 162 ~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~ 241 (410)
|+.|.+.++++++|+++|+||+||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++++++
T Consensus 233 G~~i~~~aa~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 312 (477)
T cd07113 233 GKKIGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQ 312 (477)
T ss_pred HHHHHHHHHhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeec
Q 015249 242 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 321 (410)
Q Consensus 242 ~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~ 321 (410)
+|+|.++++++||++++.+++++.++|++++++|+++++||......++|+.|||+.++++++++++||+||||++|++|
T Consensus 313 ~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~ 392 (477)
T cd07113 313 VGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPY 392 (477)
T ss_pred CCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEe
Confidence 99999999999999999999999999999999999999999754334799999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 015249 322 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 401 (410)
Q Consensus 322 ~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~ 401 (410)
+|.||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+++++||+.|+
T Consensus 393 ~~~deai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~ 472 (477)
T cd07113 393 EDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKS 472 (477)
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCCccchHHHHHHhhceEE
Confidence 99999999999999999999999999999999999999999999887767889999999999999999999999999999
Q ss_pred EEEe
Q 015249 402 VCLG 405 (410)
Q Consensus 402 v~~~ 405 (410)
|+++
T Consensus 473 v~~~ 476 (477)
T cd07113 473 VMIR 476 (477)
T ss_pred EEEe
Confidence 9764
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-86 Score=667.49 Aligned_cols=396 Identities=36% Similarity=0.532 Sum_probs=370.7
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC--CCCcceeEEeeeceEEEEEcCCCcchh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLA 85 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~p~~ 85 (410)
++++.++++++++|+|||+.+++.|+..+++.++|++..+.+..+...... ..+...++.++|+|||++|+|||||++
T Consensus 59 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~ 138 (457)
T PRK09406 59 EAEADQVAALMTLEMGKTLASAKAEALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLW 138 (457)
T ss_pred HHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHH
Confidence 344566799999999999999999999999999999999877655432111 123456889999999999999999999
Q ss_pred hhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHH
Q 015249 86 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 165 (410)
Q Consensus 86 ~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i 165 (410)
..++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++ +.+.+..|+.|++++.|+||||+.+|+.|
T Consensus 139 ~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fTGs~~~G~~i 217 (457)
T PRK09406 139 QVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLTGSEPAGRAV 217 (457)
T ss_pred HHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEECcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999986 34567889999999999999999999999
Q ss_pred HHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 166 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 166 ~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
.+.++++++|+++|+||+||+||++|+|++.+++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 218 ~~~a~~~~~~~~lElGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p 297 (457)
T PRK09406 218 AAIAGDEIKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDP 297 (457)
T ss_pred HHHHHhcCCceeeecCCCCeeEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
.++++++||++++.+++++.++|++++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|.+
T Consensus 298 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 377 (457)
T PRK09406 298 TDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADID 377 (457)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHH
Confidence 99999999999999999999999999999999999997643458999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
||++++|+++|||+++|||+|.+.++++++++++|+|+||+.+...+.+||||+|.||+|+++|.+++++||+.|+|++
T Consensus 378 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 378 EAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWI 456 (457)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceEEEEe
Confidence 9999999999999999999999999999999999999999988777889999999999999999999999999999976
|
|
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-86 Score=664.79 Aligned_cols=392 Identities=28% Similarity=0.416 Sum_probs=362.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHHHHHHhCcc---ccCCCCCcceeEEeeeceEEEEEcCCCcc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLR-EVDYGAKFIEFYAEEAKRVYGEI---IPATLPDRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
+++++++++++.+|+|||+.+++. |+..+++.++|+++..+++.+.. ......+...++.++|+|||++|+|||||
T Consensus 46 ~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 125 (484)
T PLN02174 46 DNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYP 125 (484)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCcceEEEEecceEEEEECCCccH
Confidence 456677799999999999999976 99999999999999887765521 11111234578999999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
+...++++++||++||+||+|||+.+|.++..+.+++.+ ++|+|++|+++|. .+.+..|+. +++|.|+||||+.+|+
T Consensus 126 ~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~-~lp~gvv~vv~G~-~~~~~~l~~-~~vd~V~FTGS~~~G~ 202 (484)
T PLN02174 126 FLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ-YLDSSAVRVVEGA-VTETTALLE-QKWDKIFYTGSSKIGR 202 (484)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH-hCCCCEEEEEECC-hHHHHHHhc-ccCCEEEEECChHHHH
Confidence 999999999999999999999999999999999999999 6999999999984 455677776 8999999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHH-hccCCccccCCeEEEecchHHHHHHHHHHHHhhccc
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKF-RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 242 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~-~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~ 242 (410)
.|++.++++++|+++|+|||||+||++|+|++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 203 ~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 282 (484)
T PLN02174 203 VIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYG 282 (484)
T ss_pred HHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999999 599999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 243 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 243 g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
|+|.+ ++++||++++.+++++.++|+++ .+|+++++||..+ .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 283 G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 359 (484)
T PLN02174 283 KNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYGGEKD-RENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLN 359 (484)
T ss_pred CCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEECCCcC-CCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCC
Confidence 99987 78999999999999999999997 7899999999654 357999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCccCCCCCCCCCCChHHHHHhhheee
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~--~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k 400 (410)
|.||||+++|+++|||++||||+|.++++++++++++|.|+||+.... .+.+||||+|.||+|+++|.+++++||+.|
T Consensus 360 ~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K 439 (484)
T PLN02174 360 NLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKK 439 (484)
T ss_pred CHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEEECCCcCCCCCCCCCCCCcCccccCccchHHHHHHhcceE
Confidence 999999999999999999999999999999999999999999987653 367899999999999999999999999999
Q ss_pred EEEEe
Q 015249 401 YVCLG 405 (410)
Q Consensus 401 ~v~~~ 405 (410)
+|+++
T Consensus 440 ~v~~~ 444 (484)
T PLN02174 440 AVLYR 444 (484)
T ss_pred EEEEC
Confidence 99876
|
|
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-85 Score=665.34 Aligned_cols=397 Identities=34% Similarity=0.521 Sum_probs=370.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++.+|+|||+.+++.|+..+++.++|++.......+.... ...+...++.++|+|||++|+|||||++..
T Consensus 65 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~ 143 (462)
T PRK13968 65 RARSEEMAQMITREMGKPINQARAEVAKSANLCDWYAEHGPAMLKAEPT-LVENQQAVIEYRPLGTILAIMPWNFPLWQV 143 (462)
T ss_pred HhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc-cCCCceEEEEEeccceEEEEcCCchHHHHH
Confidence 3456777999999999999999999999999999999987765443221 123456788999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.. ...++.||+++.|+||||+++|+.|.+
T Consensus 144 ~~~~~~ALaaGN~vv~KPs~~tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~-~~~l~~~~~v~~V~fTGs~~~G~~i~~ 222 (462)
T PRK13968 144 MRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDG-VSQMINDSRIAAVTVTGSVRAGAAIGA 222 (462)
T ss_pred HHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCcCcCcEEEEecCchh-hHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999985543 456889999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.+
T Consensus 223 ~aa~~l~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 302 (462)
T PRK13968 223 QAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRD 302 (462)
T ss_pred HHhhcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ea 327 (410)
+++++||+++..+++++.+++++++.+|+++++||......++|++|||+.++++++++++||+||||++|++|+|.|||
T Consensus 303 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~ea 382 (462)
T PRK13968 303 EENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHA 382 (462)
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHH
Confidence 99999999999999999999999999999999999764334789999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 015249 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 406 (410)
Q Consensus 328 i~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 406 (410)
|+++|+++|||+++|||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++|++.|+|++..
T Consensus 383 i~~~n~~~~gLs~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~ 461 (462)
T PRK13968 383 LELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKDR 461 (462)
T ss_pred HHHHhCCCCcceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCcCchHHHHHHhcceeEEEEec
Confidence 9999999999999999999999999999999999999988776788999999999999999999999999999998764
|
|
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-85 Score=667.44 Aligned_cols=394 Identities=42% Similarity=0.665 Sum_probs=371.1
Q ss_pred HHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLR-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
+++.++++++++|+|||+.+++. |+..+++.++|++.++++..++..+.. .+...+..++|+|||++|+|||||+...
T Consensus 80 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~pwN~P~~~~ 158 (476)
T cd07142 80 KHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPAD-GPHHVYTLHEPIGVVGQIIPWNFPLLMF 158 (476)
T ss_pred HhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEeceeeEEEECCCccHHHHH
Confidence 34566799999999999999974 999999999999998877666544322 2345678999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.||+++.|+||||+.+|+.|.+
T Consensus 159 ~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~ 238 (476)
T cd07142 159 AWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQ 238 (476)
T ss_pred HHHHHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977778999999999999999999999999999
Q ss_pred Hhcc-ccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 168 GAAG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 168 ~~~~-~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
.+++ +++|+++|+||+||+||++|+|++.|++.+++++|.++||.|++++|||||++++|+|+++|.++++++++|+|.
T Consensus 239 ~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~ 318 (476)
T cd07142 239 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPF 318 (476)
T ss_pred HHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9986 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 326 (410)
++++++||++++.+++++.+++++++.+|+++++||.....+++|++|||+.++++++++++||+||||++|++|+|++|
T Consensus 319 ~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~e 398 (476)
T cd07142 319 RKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDE 398 (476)
T ss_pred CCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHH
Confidence 99999999999999999999999999999999999976434578999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 327 ai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
||+++|++++||+++|||+|.++++++++++++|+|+||+.....+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 399 ai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 475 (476)
T cd07142 399 VIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVV 475 (476)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHhhheeEEe
Confidence 99999999999999999999999999999999999999988777788999999999999999999999999999885
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-85 Score=662.01 Aligned_cols=396 Identities=38% Similarity=0.577 Sum_probs=373.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++++|+|||+.+++.|+..+++.++||+.+.+...++..+. .++...+++++|+|||++|+|||||+...
T Consensus 56 ~~~~~~l~~~~~~e~Gk~~~~a~~Ev~~~i~~l~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~ 134 (455)
T cd07120 56 EANAERLARLLALENGKILGEARFEISGAISELRYYAGLARTEAGRMIEP-EPGSFSLVLREPMGVAGIIVPWNSPVVLL 134 (455)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc-CCCceEEEEEecceeEEEECCCchHHHHH
Confidence 34556779999999999999999999999999999999988776654332 24566789999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHH-cCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQ-AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~-aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
++++++||++||+||+|||+.+|.++..+.+++.+ +|+|+|++|++++++.+.+..|+.||+++.|.||||+.+|+.|.
T Consensus 135 ~~~~~~AL~aGN~vvlKps~~~~~~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 214 (455)
T cd07120 135 VRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIM 214 (455)
T ss_pred HHHHHHHHHcCCEEEeECCCCChHHHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999 79999999999987777899999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.++++++++++|+||+||+||++|+|++.+++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.
T Consensus 215 ~~aa~~~~~~~lElGG~~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~ 294 (455)
T cd07120 215 AAAAPTLKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGL 294 (455)
T ss_pred HHHHhcCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~---~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
++++++||++++.+++++++++++++++|+++++||.... ..++|++|||+.+++++|++++||+||||++|++|+|
T Consensus 295 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~ 374 (455)
T cd07120 295 DPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDD 374 (455)
T ss_pred CCCCCcCCccCHHHHHHHHHHHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCC
Confidence 9999999999999999999999999999999999875432 2578999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
.||||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|+||+|+++|++++++||+.|+|+
T Consensus 375 ~deai~~~n~~~~gLs~~ift~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~ 454 (455)
T cd07120 375 EAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIY 454 (455)
T ss_pred HHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccCccchHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999999999999998877788999999999999999999999999999986
Q ss_pred E
Q 015249 404 L 404 (410)
Q Consensus 404 ~ 404 (410)
+
T Consensus 455 ~ 455 (455)
T cd07120 455 L 455 (455)
T ss_pred C
Confidence 4
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-85 Score=666.95 Aligned_cols=396 Identities=30% Similarity=0.481 Sum_probs=368.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++++|+|||+.+++.|+..+++.++|++..++.+.++..+...++...+..++|+|||++|+|||||+..+
T Consensus 92 ~~~~~~la~~~~~e~GK~~~~a~~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 171 (508)
T PLN02315 92 RAKLDYLGRLVSLEMGKILAEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVL 171 (508)
T ss_pred HhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHH
Confidence 34456779999999999999999999999999999999887776654443323445677899999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHH----HHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALA----AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~----l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
++++++||++||+||+|||+.+|.++.. +.++|.++|+|+|++|++++ +.+.+..|+.||+++.|.||||+.+|+
T Consensus 172 ~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~fTGS~~~G~ 250 (508)
T PLN02315 172 GWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGL 250 (508)
T ss_pred HHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHH
Confidence 9999999999999999999999998877 67888999999999999998 677899999999999999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
.|++.++.+.+|+++|+||+||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 251 ~v~~~aa~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG 330 (508)
T PLN02315 251 MVQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIG 330 (508)
T ss_pred HHHHHHHhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCC
Confidence 99999998899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+|.++++++||++++.+.+++.+++++++++|+++++||...+.+|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 331 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~ 409 (508)
T PLN02315 331 DPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKT 409 (508)
T ss_pred CCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCC
Confidence 999999999999999999999999999999999999999754345899999999 5999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHh--hcceeEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheee
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE--ALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~--~~~~g~v~iN~~~~-~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k 400 (410)
.||||+++|+++|||+++|||+|.+.++++++ ++++|.||||+.+. ..+.+||||+|.||+|+++|.+++++||+.|
T Consensus 410 ~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k 489 (508)
T PLN02315 410 LEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRS 489 (508)
T ss_pred HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCccchHHHHHHHhhEE
Confidence 99999999999999999999999999999985 79999999998654 3567899999999999999999999999999
Q ss_pred EEEEe
Q 015249 401 YVCLG 405 (410)
Q Consensus 401 ~v~~~ 405 (410)
+|+++
T Consensus 490 ~v~~~ 494 (508)
T PLN02315 490 TCTIN 494 (508)
T ss_pred EEEEe
Confidence 98875
|
|
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-85 Score=665.24 Aligned_cols=396 Identities=40% Similarity=0.653 Sum_probs=372.9
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~ 88 (410)
++++++++++++|+|||+.+++.|+..+++.++|++.......+...+...++...++.++|+|||++|+|||||+...+
T Consensus 74 ~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~ 153 (473)
T cd07097 74 ARKEELARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPA 153 (473)
T ss_pred HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHH
Confidence 45667899999999999999999999999999999998877766543322245667899999999999999999999999
Q ss_pred hhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHH
Q 015249 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 168 (410)
Q Consensus 89 ~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~ 168 (410)
+++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.|++++.|.||||+.+|+.|.+.
T Consensus 154 ~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 233 (473)
T cd07097 154 WKIAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAA 233 (473)
T ss_pred HHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777789999999999999999999999999999
Q ss_pred hccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCCC
Q 015249 169 AAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 248 (410)
Q Consensus 169 ~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~ 248 (410)
++++++|+++|+||+||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++
T Consensus 234 aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 313 (473)
T cd07097 234 AAARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDE 313 (473)
T ss_pred HhccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceecceEeccCCCCCcccccceecceeeeeecCCHHH
Q 015249 249 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326 (410)
Q Consensus 249 ~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~--~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 326 (410)
++++||++++.+++++.+++++++++|+++++||.... ..++|++|||+.++++++++++||+||||++|++|+|.||
T Consensus 314 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e 393 (473)
T cd07097 314 GVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDE 393 (473)
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHH
Confidence 99999999999999999999999999999999997542 2478999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCCCCCCCC-CCChHHHHHhhheeeEEEE
Q 015249 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 327 ai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pfGg~~~SG~g-~~~g~~~l~~~~~~k~v~~ 404 (410)
|++++|+++|||+++|||+|.+.++++++++++|+|+||+.+. ..+.+||||+|.||+| +++|.+++++||+.|+|.+
T Consensus 394 ai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~~ 473 (473)
T cd07097 394 ALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVYV 473 (473)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcccCCcHHHHHHhhceeEEeC
Confidence 9999999999999999999999999999999999999998765 3468999999999999 8999999999999999864
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-85 Score=665.86 Aligned_cols=398 Identities=42% Similarity=0.664 Sum_probs=373.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc-C--CCCCcceeEEeeeceEEEEEcCCCcch
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIP-A--TLPDRRLFVLKQPVGVAGAITPWNFPL 84 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~P~Gvv~~i~p~n~p~ 84 (410)
.+++.++++++++|+||++.+++.|+..+++.++|++.++.++.++... . ...+...+++++|+|||++|+|||||+
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~ 165 (503)
T PLN02467 86 TERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPL 165 (503)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHH
Confidence 3445667999999999999999999999999999999998887665321 1 112345688999999999999999999
Q ss_pred hhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHH
Q 015249 85 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 164 (410)
Q Consensus 85 ~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~ 164 (410)
...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.|++++.|.||||+.+|+.
T Consensus 166 ~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~ 245 (503)
T PLN02467 166 LMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRK 245 (503)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999977788999999999999999999999999
Q ss_pred HHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCC
Q 015249 165 LMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244 (410)
Q Consensus 165 i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~ 244 (410)
|.+.++++++|+++|+||+||+||++|+|++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++++|+
T Consensus 246 v~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~ 325 (503)
T PLN02467 246 IMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISD 325 (503)
T ss_pred HHHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 245 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 245 ~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~--~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
|.++++++||++++.+++++.+++++++.+|+++++||.... .+++|++|||+.++++++++++||+||||++|++|+
T Consensus 326 p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~ 405 (503)
T PLN02467 326 PLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFS 405 (503)
T ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEeeC
Confidence 999999999999999999999999999999999999997532 357899999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
|.||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.......+||||+|.||+|+++|.+++++||+.|++
T Consensus 406 ~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i 485 (503)
T PLN02467 406 TEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQV 485 (503)
T ss_pred CHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhCeEEE
Confidence 99999999999999999999999999999999999999999998776667899999999999999999999999999999
Q ss_pred EEe
Q 015249 403 CLG 405 (410)
Q Consensus 403 ~~~ 405 (410)
++.
T Consensus 486 ~~~ 488 (503)
T PLN02467 486 TKY 488 (503)
T ss_pred EEe
Confidence 885
|
|
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-85 Score=657.06 Aligned_cols=394 Identities=40% Similarity=0.627 Sum_probs=370.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-ccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEI-IPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
.+++.++++++++|+|||+.+++.|+..+++.++|++..+++..... .+. ++...+++++|+|||++|+|||||++.
T Consensus 35 ~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~GvV~~I~P~N~Pl~~ 112 (429)
T cd07100 35 RERKDELARLITLEMGKPIAEARAEVEKCAWICRYYAENAEAFLADEPIET--DAGKAYVRYEPLGVVLGIMPWNFPFWQ 112 (429)
T ss_pred HhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeccC--CCceEEEEEEeeeEEEEEcCCchHHHH
Confidence 34566779999999999999999999999999999999988765422 221 245578899999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..|.++|.++|+|+|++|++++++ +.+..|+.|++++.|.||||+.+|+.|.
T Consensus 113 ~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv~~v~g~~-~~~~~l~~~~~i~~v~fTGs~~~g~~i~ 191 (429)
T cd07100 113 VFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDS-DQVEAIIADPRVRGVTLTGSERAGRAVA 191 (429)
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999854 5678899999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.+++++||+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|+
T Consensus 192 ~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~ 271 (429)
T cd07100 192 AEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPM 271 (429)
T ss_pred HHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 326 (410)
++++++||++++.+++++.+++++++++|+++++||...+..++|++|||+.++++++++++||+||||++|++|+|.||
T Consensus 272 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 351 (429)
T cd07100 272 DEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEE 351 (429)
T ss_pred cCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHH
Confidence 99999999999999999999999999999999999976423479999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 015249 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 327 ai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 352 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 429 (429)
T cd07100 352 AIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGYGRELGRFGIREFVNIKTVWV 429 (429)
T ss_pred HHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCccccccCCcchHHHHHHhcceeEEeC
Confidence 999999999999999999999999999999999999999988777889999999999999999999999999999863
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-85 Score=664.37 Aligned_cols=398 Identities=39% Similarity=0.611 Sum_probs=370.5
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHHHHHHhCccccCCC---CCcceeEEeeeceEEEEEcCCCcc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLR-EVDYGAKFIEFYAEEAKRVYGEIIPATL---PDRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
++++.++++++++|+|||+.+++. |+..+++.+++++.......++..+... .+...+..++|+|||++|+|||||
T Consensus 73 ~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P 152 (481)
T TIGR03216 73 ERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLP 152 (481)
T ss_pred HHhHHHHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcH
Confidence 345567799999999999999975 9999999999999988765544332111 134567889999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCch-hHHhHHhcCCCccEEEEeCcHHHH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAP-DIGDALLTSPQVRKITFTGSTAVG 162 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~-~~~~~l~~~~~v~~v~ftGs~~~~ 162 (410)
+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++. +.+..|..||+++.|.||||+.+|
T Consensus 153 l~~~~~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G 232 (481)
T TIGR03216 153 LLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTG 232 (481)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999999999999999998654 478889999999999999999999
Q ss_pred HHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhccc
Q 015249 163 KKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 242 (410)
Q Consensus 163 ~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~ 242 (410)
+.|.+.++++.+|+++|+||+||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++++++
T Consensus 233 ~~i~~~aa~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~ 312 (481)
T TIGR03216 233 SAIMKAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKI 312 (481)
T ss_pred HHHHHHHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-----CCCceecceEeccCCCCCcccccceecceee
Q 015249 243 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAP 317 (410)
Q Consensus 243 g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~-----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~ 317 (410)
|+|.++++++||++++.+++++.++|++++++|+++++||.... .+|+|++|||+.++++++++++||+||||++
T Consensus 313 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~ 392 (481)
T TIGR03216 313 GVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCH 392 (481)
T ss_pred CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEE
Confidence 99999999999999999999999999999999999999997532 2589999999999999999999999999999
Q ss_pred eeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhh
Q 015249 318 LLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFL 397 (410)
Q Consensus 318 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~ 397 (410)
|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|.+++++||
T Consensus 393 V~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~ 472 (481)
T TIGR03216 393 IAPFDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYT 472 (481)
T ss_pred EEEeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCcCchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999988776778999999999999999999999999
Q ss_pred eeeEEEEe
Q 015249 398 EIKYVCLG 405 (410)
Q Consensus 398 ~~k~v~~~ 405 (410)
+.|+|+++
T Consensus 473 ~~k~v~~~ 480 (481)
T TIGR03216 473 ELTNVCIK 480 (481)
T ss_pred ceEEEEEe
Confidence 99999874
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-85 Score=661.57 Aligned_cols=395 Identities=38% Similarity=0.613 Sum_probs=370.4
Q ss_pred HHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLR-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
+++.++++++++|+|||+.+++. |+..+++.++|++.......++..+.. .+...+++++|+|||++|+|||||+...
T Consensus 75 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~Pl~~~ 153 (475)
T cd07117 75 ENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMID-EDTLSIVLREPIGVVGQIIPWNFPFLMA 153 (475)
T ss_pred HCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeEEEEeecceEEEECCCccHHHHH
Confidence 34466789999999999999985 999999999999988766555433322 3445688999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+++|++.+.+..|+.|++++.|+||||+.+|+.|.+
T Consensus 154 ~~~i~~AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 232 (475)
T cd07117 154 AWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAI 232 (475)
T ss_pred HHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 999999999999999999999999999999999985 9999999999877788999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.+
T Consensus 233 ~aa~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~ 312 (475)
T cd07117 233 AAAKKLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLD 312 (475)
T ss_pred HHhccCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+++++||++++.+++++.+++++++++|+++++||.... .+++|++|||+.++++++++++||+||||++|++|+|
T Consensus 313 ~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~ 392 (475)
T cd07117 313 PDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKT 392 (475)
T ss_pred CCCcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECC
Confidence 999999999999999999999999999999999997542 2578999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
.||||+++|+++|||+++|||+|.+++.++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 393 ~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 472 (475)
T cd07117 393 EDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIY 472 (475)
T ss_pred HHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEE
Confidence 99999999999999999999999999999999999999999997777788999999999999999999999999999998
Q ss_pred Ee
Q 015249 404 LG 405 (410)
Q Consensus 404 ~~ 405 (410)
++
T Consensus 473 ~~ 474 (475)
T cd07117 473 ID 474 (475)
T ss_pred Ee
Confidence 64
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-85 Score=664.80 Aligned_cols=395 Identities=39% Similarity=0.614 Sum_probs=371.4
Q ss_pred HHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLR-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++++++++.+|+||++.+++. |+..+++.++|++.+.+...++..+.. .+...+++++|+|||++|+|||||+...
T Consensus 81 ~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~PlGVv~~I~p~N~P~~~~ 159 (488)
T PRK13252 81 ERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLR-GGSFVYTRREPLGVCAGIGAWNYPIQIA 159 (488)
T ss_pred HhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccC-CCceEEEEEeeeeEEEEECCCchHHHHH
Confidence 44567899999999999999984 999999999999998877665543322 3445688999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++. .+..|+.||+++.|.||||+++|+.|.+
T Consensus 160 ~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~~~g~~i~~ 238 (488)
T PRK13252 160 CWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGVPTGKKVMA 238 (488)
T ss_pred HHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998655 8899999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.+
T Consensus 239 ~aa~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 318 (488)
T PRK13252 239 AAAASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMD 318 (488)
T ss_pred HHhhcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+++++||++++.+++++++++++++.+|+++++||.... .+++|++|||+.++++++++++||+||||++|++|+|
T Consensus 319 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~ 398 (488)
T PRK13252 319 PATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDD 398 (488)
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCC
Confidence 999999999999999999999999999999999996432 2489999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
.+|||+++|+++|||+++|||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 399 ~~eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~ 478 (488)
T PRK13252 399 EDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQ 478 (488)
T ss_pred HHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCCcCChHHHHHHhcceEEEE
Confidence 99999999999999999999999999999999999999999987666678999999999999999999999999999998
Q ss_pred Ee
Q 015249 404 LG 405 (410)
Q Consensus 404 ~~ 405 (410)
++
T Consensus 479 ~~ 480 (488)
T PRK13252 479 VE 480 (488)
T ss_pred Ee
Confidence 75
|
|
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-85 Score=664.05 Aligned_cols=396 Identities=43% Similarity=0.661 Sum_probs=371.5
Q ss_pred HHHHHHHHHHHHHhhchHHHH-HHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLL-LREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a-~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
+++.++++++++|+||++.++ ..|+..+++.+++++.++++..++..+.. .+...+.+++|+|||++|+|||||+...
T Consensus 84 ~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 162 (481)
T cd07141 84 RDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMD-GDFFTYTRHEPVGVCGQIIPWNFPLLMA 162 (481)
T ss_pred HhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEEeceeEEEEEccChhHHHHH
Confidence 445667899999999999766 56999999999999999888766543322 2345678999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|++.+.+..|+.|++++.|+||||+.+|+.|.+
T Consensus 163 ~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~ 242 (481)
T cd07141 163 AWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQ 242 (481)
T ss_pred HHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977778899999999999999999999999999
Q ss_pred Hhcc-ccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 168 GAAG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 168 ~~~~-~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
.++. +++|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|+
T Consensus 243 ~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~ 322 (481)
T cd07141 243 AAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPF 322 (481)
T ss_pred HhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 8886 889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 326 (410)
++++++||++++.+++++.+++++++.+|+++++||...+..++|++|||+.++++++++++||+||||++|++|+|.+|
T Consensus 323 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e 402 (481)
T cd07141 323 DPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDE 402 (481)
T ss_pred CCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHHH
Confidence 99999999999999999999999999999999999976433578999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 327 ai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
||+++|+++|||+++|||+|.+++.++++++++|+|+||++....+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 403 ai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~~ 481 (481)
T cd07141 403 VIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVTIK 481 (481)
T ss_pred HHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCCccchHHHHHHHhheEEEEEC
Confidence 9999999999999999999999999999999999999998877778899999999999999999999999999999764
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-84 Score=661.03 Aligned_cols=395 Identities=39% Similarity=0.669 Sum_probs=371.9
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
.+++.++++++++|+||++.+++.|+..+++.++|++.++.+..++..+...++...+++++|+|||++|+|||||++..
T Consensus 68 ~~~~~ela~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~ 147 (465)
T cd07151 68 EERRDEIVEWLIRESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLS 147 (465)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHH
Confidence 34556679999999999999999999999999999999887776554443334666788999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~-~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
++++++||++||+||+|||+.+|.++ ..+.+++.++|+|+|++|+++|++.+.+..|+.||.++.|.||||+.+|+.|+
T Consensus 148 ~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 227 (465)
T cd07151 148 MRSVAPALALGNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIG 227 (465)
T ss_pred HHHHHHHHHcCCEEEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 99999999999999999999999996 68999999999999999999987777889999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.++++++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.
T Consensus 228 ~~aa~~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~ 307 (465)
T cd07151 228 ELAGRHLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPS 307 (465)
T ss_pred HHHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 326 (410)
++++++||++++.+++++.+++++++.+|+++++||.. +++|++|||+.++++++++++||+||||++|++|+|.||
T Consensus 308 ~~~~~~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e 384 (465)
T cd07151 308 DPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEA---EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEE 384 (465)
T ss_pred CCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEecCCc---CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHH
Confidence 99999999999999999999999999999999999864 378999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 327 ai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
||+++|+++|||+++|||+|.++++++++++++|+|+||+.+.. .+.+||||+|.||+|+++|+++|++|++.|+++++
T Consensus 385 ai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 385 ALELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred HHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCcCChHHHHHHhhceEEEEec
Confidence 99999999999999999999999999999999999999988764 46799999999999999999999999999999874
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-85 Score=659.33 Aligned_cols=397 Identities=41% Similarity=0.653 Sum_probs=374.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++++|+|||+.+++.|+..+++.++|++.+.+...+...+....+...++.++|+|||++|+|||||+...
T Consensus 57 ~~~~~~la~~~~~e~Gk~~~~a~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~ 136 (454)
T cd07118 57 RARRERLALIETLESGKPISQARGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLIL 136 (454)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHH
Confidence 34566789999999999999999999999999999999877765544332223455688999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.+..|+.|++++.|.||||+++|+.|.+
T Consensus 137 ~~~i~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 216 (454)
T cd07118 137 SQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAA 216 (454)
T ss_pred HHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877778899999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++.+++++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.+
T Consensus 217 ~aa~~~~~~~lelgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~ 296 (454)
T cd07118 217 AAARNLKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLD 296 (454)
T ss_pred HHHhcCCcEEeccCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceecceEeccCCCCCcccccceecceeeeeecCCHHH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~-~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 326 (410)
+++++||++++.+++++.++|++++.+|+++++||.... ..|+|++|||+.++++++++++||+||||++|++|+|.+|
T Consensus 297 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e 376 (454)
T cd07118 297 PETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDE 376 (454)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHH
Confidence 999999999999999999999999999999999997653 3579999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 015249 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 327 ai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
|++++|+++|||+++|||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|++++++||+.|++++
T Consensus 377 ai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~~ 454 (454)
T cd07118 377 AIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEYTELKTVHL 454 (454)
T ss_pred HHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEeC
Confidence 999999999999999999999999999999999999999988777889999999999999999999999999999863
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-84 Score=661.88 Aligned_cols=399 Identities=41% Similarity=0.640 Sum_probs=375.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++++|+||++.+++.|+..+++.++|++.+.++..++..+.. .+...+++++|+|||++|+|||||+...
T Consensus 73 ~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~ 151 (482)
T cd07119 73 REDAEELARLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVYDVP-PHVISRTVREPVGVCGLITPWNYPLLQA 151 (482)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEeeeeeEEEEcCCchHHHHH
Confidence 345667799999999999999999999999999999999877655443322 4556789999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|++++++.+.+..|+.||+++.|.||||+.+|+.|.+
T Consensus 152 ~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~ 231 (482)
T cd07119 152 AWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMR 231 (482)
T ss_pred HHHHHHHHhcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999876678899999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.+
T Consensus 232 ~aa~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~ 311 (482)
T cd07119 232 AAAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLD 311 (482)
T ss_pred HHHhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+++++||++++.+++++.+++++++++|+++++||.... ..++|++|||+.++++++++++||+||||++|++|+|
T Consensus 312 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~ 391 (482)
T cd07119 312 ADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDT 391 (482)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCC
Confidence 999999999999999999999999999999999997532 2479999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
+||||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 392 ~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~ 471 (482)
T cd07119 392 EEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHIN 471 (482)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEE
Confidence 99999999999999999999999999999999999999999997666788999999999999999999999999999998
Q ss_pred Eecc
Q 015249 404 LGDM 407 (410)
Q Consensus 404 ~~~~ 407 (410)
++.+
T Consensus 472 ~~~~ 475 (482)
T cd07119 472 INLS 475 (482)
T ss_pred EecC
Confidence 8754
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-84 Score=660.62 Aligned_cols=396 Identities=36% Similarity=0.580 Sum_probs=371.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
.+++.++++++.+|+||++.+++ .|+..+++.++|++.......++.... ..+...+..++|+|||++|+|||||+..
T Consensus 74 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 152 (480)
T cd07559 74 EENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEI-DEDTLSYHFHEPLGVVGQIIPWNFPLLM 152 (480)
T ss_pred HHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeEEEEeccceEEEECCCchHHHH
Confidence 34456678999999999999997 499999999999999887665543322 2345678899999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|++.+.+..|+.||+++.|+||||+.+|+.|.
T Consensus 153 ~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~ 231 (480)
T cd07559 153 AAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIM 231 (480)
T ss_pred HHHHHHHHHHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 9999999999999999999999999999999999996 999999999997778899999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCC-----CHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcc
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDA-----DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 241 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~a-----dl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~ 241 (410)
+.++++++|+++|+||+||+||++|+ |++.|++.+++++|.++||.|++++|||||++++|+|+++|++++++++
T Consensus 232 ~~aa~~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~ 311 (480)
T cd07559 232 QYAAENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIK 311 (480)
T ss_pred HHHhccCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceecceEeccCCCCCcccccceecceee
Q 015249 242 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAP 317 (410)
Q Consensus 242 ~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~ 317 (410)
+|+|+++++++||++++.+++++.++|++++.+|+++++||.... ..++|++|||+.++++++++++||+||||++
T Consensus 312 ~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~ 391 (480)
T cd07559 312 VGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLA 391 (480)
T ss_pred CCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEE
Confidence 999999999999999999999999999999999999999997642 3589999999999999999999999999999
Q ss_pred eeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhh
Q 015249 318 LLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFL 397 (410)
Q Consensus 318 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~ 397 (410)
|++|+|.+|||+++|+++|||+++|||+|.+++.++++++++|+|+||+.....+.+||||+|.||+|+++|.+++++||
T Consensus 392 v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~ 471 (480)
T cd07559 392 VITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQ 471 (480)
T ss_pred EEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999987777788999999999999999999999999
Q ss_pred eeeEEEEe
Q 015249 398 EIKYVCLG 405 (410)
Q Consensus 398 ~~k~v~~~ 405 (410)
+.|+|+++
T Consensus 472 ~~k~v~~~ 479 (480)
T cd07559 472 QTKNILVS 479 (480)
T ss_pred ceEEEEEe
Confidence 99999874
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-84 Score=660.65 Aligned_cols=397 Identities=40% Similarity=0.654 Sum_probs=372.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
++++.++++++++|+||++.+++ .|+..+++.+++++...+.+.+...+....+...+++++|+|||++|+|||||+..
T Consensus 75 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~ 154 (475)
T PRK13473 75 EENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMM 154 (475)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHH
Confidence 44556679999999999999986 49999999999999988776654332222344567899999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+++|++.+.+..|+.|++++.|.||||+++|+.|.
T Consensus 155 ~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~ 233 (475)
T PRK13473 155 AAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVL 233 (475)
T ss_pred HHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 9999999999999999999999999999999999999 999999999987778899999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.++++++|+++|+||+||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.
T Consensus 234 ~~aa~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~ 313 (475)
T PRK13473 234 SAAADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPD 313 (475)
T ss_pred HHHhhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCC-CeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKG-AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~g-a~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
++++++||++++.+++++.++|+++.++| +++++||...+..|+|++|||+.++++++.+++||+||||++|++|+|.|
T Consensus 314 ~~~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~d 393 (475)
T PRK13473 314 DEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDED 393 (475)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHH
Confidence 99999999999999999999999999999 99999997643357899999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 394 eai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~~ 473 (475)
T PRK13473 394 QAVRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMVK 473 (475)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceEEEEEe
Confidence 99999999999999999999999999999999999999999877777899999999999999999999999999999875
|
|
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-84 Score=657.66 Aligned_cols=396 Identities=35% Similarity=0.574 Sum_probs=372.0
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++.+|+||++.+++.|+..+++.++|++.+...+.++..+.. .+...++.++|+|||++|+|||||+...
T Consensus 55 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 133 (456)
T cd07107 55 REHAEELALIDALDCGNPVSAMLGDVMVAAALLDYFAGLVTELKGETIPVG-GRNLHYTLREPYGVVARIVAFNHPLMFA 133 (456)
T ss_pred HHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC-CCceEEEEEecceEEEEECCcccHHHHH
Confidence 345567799999999999999999999999999999988877666544432 3456788999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|++++++.+.+..|+.|++++.|.||||+.+|+.|.+
T Consensus 134 ~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~ 212 (456)
T cd07107 134 AAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMR 212 (456)
T ss_pred HHHHhHHHHcCCEEEEeCCCCChHHHHHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 999999999999999999999999999999999996 9999999999877778899999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHH-HhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAK-FRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~-~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
.++++++|+++|+||+||+||++|+|++.|++.+++++ |.++||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus 213 ~aa~~~~~~~lElgG~~p~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~ 292 (456)
T cd07107 213 AAAEGIKHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPT 292 (456)
T ss_pred HHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999995 89999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
++++++||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 293 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~ 372 (456)
T cd07107 293 DPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWR 372 (456)
T ss_pred CCCCCcCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeC
Confidence 9999999999999999999999999999999999996532 247899999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
|.||||+++|+++|||+++|||+|.++++++++++++|+|+||+.....+.+||||+|.||+|+++|++++++||+.|+|
T Consensus 373 ~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v 452 (456)
T cd07107 373 DEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNV 452 (456)
T ss_pred CHHHHHHHHhCCCCcceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999999999887777899999999999999999999999999999
Q ss_pred EEe
Q 015249 403 CLG 405 (410)
Q Consensus 403 ~~~ 405 (410)
+++
T Consensus 453 ~~~ 455 (456)
T cd07107 453 NVR 455 (456)
T ss_pred EEe
Confidence 874
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-84 Score=656.96 Aligned_cols=396 Identities=45% Similarity=0.697 Sum_probs=371.9
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhC---ccccCCCCCcceeEEeeeceEEEEEcCCCcch
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYG---EIIPATLPDRRLFVLKQPVGVAGAITPWNFPL 84 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~ 84 (410)
.+++.++++++.+|+||+..++..|+..+++.++|++...+.+.. ...+...++...+++++|+|||++|+|||||+
T Consensus 55 ~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~ 134 (456)
T cd07110 55 RERREELAELEARDNGKPLDEAAWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPL 134 (456)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHH
Confidence 344566799999999999999999999999999999998877642 22222223556789999999999999999999
Q ss_pred hhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHH
Q 015249 85 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 164 (410)
Q Consensus 85 ~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~ 164 (410)
...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.||+++.|.||||+.+|+.
T Consensus 135 ~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~ 214 (456)
T cd07110 135 LMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQ 214 (456)
T ss_pred HHHHHHHHHHHHcCCEEEEECcccchHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999977778899999999999999999999999
Q ss_pred HHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCC
Q 015249 165 LMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244 (410)
Q Consensus 165 i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~ 244 (410)
|.+.++++++|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+
T Consensus 215 v~~~aa~~~~~~~lElgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~ 294 (456)
T cd07110 215 VMQAAAQDIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGD 294 (456)
T ss_pred HHHHHhhcCCeEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 245 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 245 ~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~--~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
|.++++++||++++.+++++.+++++++.+|+++++||.... ..++|+.|||+.++++++++++||+||||++|++|+
T Consensus 295 p~~~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~ 374 (456)
T cd07110 295 PLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFA 374 (456)
T ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecC
Confidence 999999999999999999999999999999999999997642 357899999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
|.|||++++|+++|||+++|||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+.|+|
T Consensus 375 ~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i 454 (456)
T cd07110 375 TEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQI 454 (456)
T ss_pred CHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHhcceeEE
Confidence 99999999999999999999999999999999999999999999876677899999999999999999999999999988
Q ss_pred E
Q 015249 403 C 403 (410)
Q Consensus 403 ~ 403 (410)
+
T Consensus 455 ~ 455 (456)
T cd07110 455 T 455 (456)
T ss_pred e
Confidence 5
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-84 Score=658.10 Aligned_cols=396 Identities=35% Similarity=0.565 Sum_probs=366.0
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++++|+|||+.+++.|+..+++.++|++.+.+.+.+...+...++...+..++|+|||++|+|||||+...
T Consensus 70 ~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~ 149 (474)
T cd07130 70 RKKKEALGKLVSLEMGKILPEGLGEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVW 149 (474)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHH
Confidence 34456679999999999999999999999999999998877665544333334556688899999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHH----HHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~----l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
++++++||++||+||+|||+.+|.++..+.++ |.++|+|+|++|+++|+ .+.+..|+.|++|+.|.||||+.+|+
T Consensus 150 ~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~-~~~~~~L~~~~~vd~V~fTGs~~~g~ 228 (474)
T cd07130 150 GWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGG-ADVGEALVKDPRVPLVSFTGSTAVGR 228 (474)
T ss_pred HHHhhHHHHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhHHHHHhcCCCCCEEEEECchHHHH
Confidence 99999999999999999999999999887765 57999999999999984 55789999999999999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
.|++.++++.+|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 229 ~i~~~aa~~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g 308 (474)
T cd07130 229 QVGQAVAARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIG 308 (474)
T ss_pred HHHHHHHhcCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+|.++++++||++++.+++++.++|++++++|+++++||...+.+|+|++|||+.++++ |++++||+||||++|++|+|
T Consensus 309 ~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~ 387 (474)
T cd07130 309 DPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDT 387 (474)
T ss_pred CCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCC
Confidence 99999999999999999999999999999999999999976433579999999987766 99999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhh--cceeEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheee
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEA--LEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~--~~~g~v~iN~~~~-~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k 400 (410)
.+||++++|+++|||+++|||+|.+++++++++ +++|+|+||+.+. ..+.+||||+|.||+|+++|++++++|++.|
T Consensus 388 ~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k 467 (474)
T cd07130 388 LEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRS 467 (474)
T ss_pred HHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCccchHHHHHHHhheE
Confidence 999999999999999999999999999999987 9999999998654 4578999999999999999999999999999
Q ss_pred EEEEe
Q 015249 401 YVCLG 405 (410)
Q Consensus 401 ~v~~~ 405 (410)
+|+++
T Consensus 468 ~~~~~ 472 (474)
T cd07130 468 TCTIN 472 (474)
T ss_pred EEEEe
Confidence 98875
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-84 Score=659.28 Aligned_cols=396 Identities=32% Similarity=0.464 Sum_probs=369.7
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~ 88 (410)
+++.++++++++|+||++.+++.|+..+++.++|++..+....++..+....+...+..++|+|||++|+|||||+...+
T Consensus 75 ~~~~el~~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 154 (478)
T cd07085 75 ENLDELARLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPL 154 (478)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHH
Confidence 45567799999999999999999999999999999988776655543322234567899999999999999999999999
Q ss_pred hhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHH
Q 015249 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 168 (410)
Q Consensus 89 ~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~ 168 (410)
+++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|+ .+.+..|+.|++++.|.||||+.+|+.|.+.
T Consensus 155 ~~i~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~ 233 (478)
T cd07085 155 WMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHGG-KEAVNALLDHPDIKAVSFVGSTPVGEYIYER 233 (478)
T ss_pred HHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEecC-HHHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999984 5678999999999999999999999999999
Q ss_pred hccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCCC
Q 015249 169 AAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 248 (410)
Q Consensus 169 ~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~ 248 (410)
++++++|+++|+||+||+||++|+|++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++++|+|.++
T Consensus 234 aa~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~ 313 (478)
T cd07085 234 AAANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDP 313 (478)
T ss_pred HhhcCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 249 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 249 ~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
++++||++++.+++++.++|++++++|+++++||.... .+|+|++|||+.++++++++++||+||||++|++|+|+
T Consensus 314 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 393 (478)
T cd07085 314 GADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTL 393 (478)
T ss_pred CCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCH
Confidence 99999999999999999999999999999999997532 25799999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCC--CCChHHHHHhhheeeE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG--REGSKYGMDEFLEIKY 401 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g--~~~g~~~l~~~~~~k~ 401 (410)
||||+++|+++|||+++|||+|.++++++++++++|+|+||+.... .+.+||||+|.||+| +++|++++++||+.|+
T Consensus 394 deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~ 473 (478)
T cd07085 394 DEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKT 473 (478)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChHHHHHHhcceEE
Confidence 9999999999999999999999999999999999999999987553 467899999999999 4689999999999999
Q ss_pred EEEe
Q 015249 402 VCLG 405 (410)
Q Consensus 402 v~~~ 405 (410)
|++.
T Consensus 474 v~~~ 477 (478)
T cd07085 474 VTSR 477 (478)
T ss_pred EEEe
Confidence 9764
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-84 Score=658.20 Aligned_cols=396 Identities=37% Similarity=0.584 Sum_probs=371.6
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~ 88 (410)
+++.++++++++|+||++.+++.|+..+++.++|++...+.+.+...+...++...++.++|+|||++|+|||||+...+
T Consensus 72 ~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~ 151 (478)
T cd07086 72 KKKEALGRLVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPG 151 (478)
T ss_pred HhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHH
Confidence 44566799999999999999999999999999999998877766544333334567889999999999999999999999
Q ss_pred hhccchhccCCeEEEecCCCcHHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHH
Q 015249 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 164 (410)
Q Consensus 89 ~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~a----glP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~ 164 (410)
+++++||++||+||+|||+.+|.++..+.+++.++ |+|+|+++++++++. .+..|..||+++.|.||||+.+|+.
T Consensus 152 ~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~fTGs~~~g~~ 230 (478)
T cd07086 152 WNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRR 230 (478)
T ss_pred HHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEEEECcHHHHHH
Confidence 99999999999999999999999999999999998 999999999998654 8889999999999999999999999
Q ss_pred HHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCC
Q 015249 165 LMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244 (410)
Q Consensus 165 i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~ 244 (410)
|.+.++++.+++++|+||+||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+
T Consensus 231 i~~~aa~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~ 310 (478)
T cd07086 231 VGETVARRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGD 310 (478)
T ss_pred HHHHHhccCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC--CCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 245 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL--GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 245 ~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~--~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
|.++++++||++++.+++++.++++++++.|+++++||..... .++|++|||+.++++++++++||+||||++|++|+
T Consensus 311 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~ 390 (478)
T cd07086 311 PLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFD 390 (478)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeC
Confidence 9999999999999999999999999999999999999976432 47899999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhh--cceeEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhhee
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEA--LEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEI 399 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~--~~~g~v~iN~~~~-~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~ 399 (410)
|.||||+++|+++|||+++|||+|.+++++++++ +++|+|+||+.+. ..+.+||||+|.||+|+++|.+++++|++.
T Consensus 391 ~~deai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~ 470 (478)
T cd07086 391 SLEEAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRR 470 (478)
T ss_pred CHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCCccchHHHHHHhhce
Confidence 9999999999999999999999999999999999 9999999998765 356899999999999999999999999999
Q ss_pred eEEEEe
Q 015249 400 KYVCLG 405 (410)
Q Consensus 400 k~v~~~ 405 (410)
|+|+++
T Consensus 471 k~i~~~ 476 (478)
T cd07086 471 STCTIN 476 (478)
T ss_pred EEEEEe
Confidence 999875
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-84 Score=659.30 Aligned_cols=396 Identities=42% Similarity=0.686 Sum_probs=371.4
Q ss_pred HHHHHHHHHHHHHhhchHHHH-HHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLL-LREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a-~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
+++.++++++.+|+||++.++ ..|+..+++.+++++.+.++..++..+.. .+...+..++|+|||++|+|||||+...
T Consensus 83 ~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~ 161 (484)
T cd07144 83 KNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTS-PNKLAYTLHEPYGVCGQIIPWNYPLAMA 161 (484)
T ss_pred HhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEEecceEEEEECcCCCHHHHH
Confidence 345567899999999998765 67999999999999999888755443322 3455688999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|++.+.+..|+.||+++.|.||||+.+|+.|.+
T Consensus 162 ~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~ 241 (484)
T cd07144 162 AWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMK 241 (484)
T ss_pred HHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977788999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhh-cccCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVGDGF 246 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~-~~~g~~~ 246 (410)
.++++++|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|++++++ +++|+|.
T Consensus 242 ~a~~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~ 321 (484)
T cd07144 242 AAAQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPF 321 (484)
T ss_pred HHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999985 8999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~---~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
++++++||++++.+++++.+++++++++|+++++||.... ..|+|++|||+.++++++++++||+||||++|++|+|
T Consensus 322 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~ 401 (484)
T cd07144 322 DDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKT 401 (484)
T ss_pred CCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCC
Confidence 9999999999999999999999999999999999987642 2578999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
.+|||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.+...+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 402 ~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 481 (484)
T cd07144 402 YEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAVH 481 (484)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999999998776778999999999999999999999999999998
Q ss_pred Ee
Q 015249 404 LG 405 (410)
Q Consensus 404 ~~ 405 (410)
++
T Consensus 482 ~~ 483 (484)
T cd07144 482 IN 483 (484)
T ss_pred Ee
Confidence 74
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-84 Score=660.59 Aligned_cols=396 Identities=40% Similarity=0.646 Sum_probs=370.8
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHH-HhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKR-VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
.+++.++++++++|+||++.+++.|+..+++.+++++....+ ..++..+. ++...+..++|+|||++|+|||||+..
T Consensus 74 ~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~I~p~N~P~~~ 151 (488)
T TIGR02299 74 EQHADEIAVLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRTYPV--DTHLNYTVRVPVGPVGLITPWNAPFML 151 (488)
T ss_pred HHhHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHhHHHhcCCccccC--CCceEEEEEEecceEEEECCCccHHHH
Confidence 345567799999999999999999999999999999988763 33333322 234567889999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|++.+.+..|+.|++++.|.||||+.+|+.|+
T Consensus 152 ~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~ 231 (488)
T TIGR02299 152 STWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIM 231 (488)
T ss_pred HHHHHHHHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987777888999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.++++++|+++|+||+||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.
T Consensus 232 ~~aa~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~ 311 (488)
T TIGR02299 232 RNGADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPL 311 (488)
T ss_pred HHHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-------CCCceecceEeccCCCCCcccccceecceeeee
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-------LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLL 319 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~-------~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~ 319 (410)
++++++||++++.+++++.+++++++++|+++++||.... .+++|++|||+.++++++++++||+||||++|+
T Consensus 312 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~ 391 (488)
T TIGR02299 312 DPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVI 391 (488)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEE
Confidence 9999999999999999999999999999999999986531 247899999999999999999999999999999
Q ss_pred ecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhhee
Q 015249 320 CFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEI 399 (410)
Q Consensus 320 ~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~ 399 (410)
+|+|.+|||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|.+++++|++.
T Consensus 392 ~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~ 471 (488)
T TIGR02299 392 PFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTET 471 (488)
T ss_pred eeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhce
Confidence 99999999999999999999999999999999999999999999998777677899999999999999999999999999
Q ss_pred eEEEEe
Q 015249 400 KYVCLG 405 (410)
Q Consensus 400 k~v~~~ 405 (410)
|+|+++
T Consensus 472 k~i~~~ 477 (488)
T TIGR02299 472 KNVALA 477 (488)
T ss_pred EEEEEe
Confidence 999885
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-84 Score=656.92 Aligned_cols=397 Identities=42% Similarity=0.684 Sum_probs=371.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHH-HHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLL-LREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a-~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
.+++.++++++.+|+|||+.++ +.|+..+++.+++++.++++..++..... .+...+..++|+|||++|+|||||+..
T Consensus 82 ~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P~~~ 160 (481)
T cd07143 82 ERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETD-IKKLTYTRHEPIGVCGQIIPWNFPLLM 160 (481)
T ss_pred HHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEecceeEEEECCCcChHHH
Confidence 3445677999999999999655 56999999999999999887655543322 345577899999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.||+++.|.||||+.+|+.|.
T Consensus 161 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~ 240 (481)
T cd07143 161 CAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVM 240 (481)
T ss_pred HHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997777889999999999999999999999999
Q ss_pred HHhcc-ccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 167 AGAAG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 167 ~~~~~-~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
+.+++ +++|+++|+||+||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 241 ~~aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p 320 (481)
T cd07143 241 EAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDP 320 (481)
T ss_pred HHHHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCC
Confidence 98885 78999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
.++++++||++++.+++++.++|++++.+|+++++||......++|+.|||+.++++++++++||+||||++|++|+|.+
T Consensus 321 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 400 (481)
T cd07143 321 FAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEE 400 (481)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHH
Confidence 99999999999999999999999999999999999997653357899999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
||++++|+++|||++||||+|.+.+.++++++++|+|+||+.....+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 401 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~~ 480 (481)
T cd07143 401 EAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHIN 480 (481)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccCcccHHHHHHHHhCeEEEEEe
Confidence 99999999999999999999999999999999999999999877778899999999999999999999999999999864
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-84 Score=657.19 Aligned_cols=396 Identities=44% Similarity=0.695 Sum_probs=371.7
Q ss_pred HHHHHHHHHHHHHHhhchHHHH-HHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLL-LREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a-~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
.+++.++++++.+|+||++.++ ..|+..+++.+++++.++++..++..+.. .+...++.++|+|||++|+|||||++.
T Consensus 79 ~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~ 157 (476)
T cd07091 79 ERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPID-GNFLAYTRREPIGVCGQIIPWNFPLLM 157 (476)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEeceeEEEEECCCcCHHHH
Confidence 3455677999999999998655 56999999999999998877666543322 455678999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.+..|+.|+++|.|.||||+.+|+.|.
T Consensus 158 ~~~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~ 237 (476)
T cd07091 158 LAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIM 237 (476)
T ss_pred HHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987777889999999999999999999999999
Q ss_pred HHhcc-ccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 167 AGAAG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 167 ~~~~~-~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
+.+++ +++|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 238 ~~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p 317 (476)
T cd07091 238 EAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDP 317 (476)
T ss_pred HHHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCC
Confidence 99987 88999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
.++++++||++++.+++++.+++++++.+|+++++||......++|++|||+.++++++++++||+||||++|++|+|++
T Consensus 318 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ 397 (476)
T cd07091 318 FDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTED 397 (476)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHH
Confidence 99999999999999999999999999999999999997653457899999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
||++++|++++||+++|||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|.+|+++||+.|+|++
T Consensus 398 eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~ 476 (476)
T cd07091 398 EVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVTI 476 (476)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhhceeEEeC
Confidence 9999999999999999999999999999999999999999987777889999999999999999999999999999864
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-84 Score=653.12 Aligned_cols=393 Identities=34% Similarity=0.505 Sum_probs=366.7
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC----CCCcceeEEeeeceEEEEEcCCCcc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
++++.++++++++|+||++.+++.|+..+++.++|++.....+.+...+.. .++...+..++|+|||++|+|||||
T Consensus 58 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P 137 (455)
T cd07148 58 EERADELALLIAREGGKPLVDAKVEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHP 137 (455)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcH
Confidence 344566799999999999999999999999999999998877655433221 1244578899999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
++..++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++++ .+.+..|+.|++++.|.||||+++|+
T Consensus 138 ~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~v~fTGs~~~G~ 216 (455)
T cd07148 138 LNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEAGLPEGWCQAVPCE-NAVAEKLVTDPRVAFFSFIGSARVGW 216 (455)
T ss_pred HHHHHHHHHHHHHcCCEEEeeCCCcccHHHHHHHHHHHHcCCCcCcEEEEeCC-hHHHHHHhcCCCCCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999999999999999999985 46789999999999999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
.|.+.++. .+|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|
T Consensus 217 ~i~~~aa~-~~~~~lElGG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g 295 (455)
T cd07148 217 MLRSKLAP-GTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVG 295 (455)
T ss_pred HHHHHhhc-CCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCC
Confidence 99998876 48999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+|.++++++||++++.+++++.+++++++.+|+++++||... .++|++|||+.++++++++++||+||||++|++|+|
T Consensus 296 ~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 373 (455)
T cd07148 296 DPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRL--SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDD 373 (455)
T ss_pred CCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccC--CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCC
Confidence 999999999999999999999999999999999999999765 468999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCC-CCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~-~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
.+|||+++|+++|||+++|||+|.+.+.++++++++|+|+||+++... +.+||||+|.||+|+++|.+++++||+.|++
T Consensus 374 ~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~ 453 (455)
T cd07148 374 LDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMA 453 (455)
T ss_pred HHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCCCchHHHHHHhhceeEE
Confidence 999999999999999999999999999999999999999999876543 5689999999999999999999999999998
Q ss_pred EE
Q 015249 403 CL 404 (410)
Q Consensus 403 ~~ 404 (410)
++
T Consensus 454 ~~ 455 (455)
T cd07148 454 VI 455 (455)
T ss_pred eC
Confidence 64
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-84 Score=654.16 Aligned_cols=395 Identities=45% Similarity=0.730 Sum_probs=370.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCC----CCcceeEEeeeceEEEEEcCCCcc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATL----PDRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
++++.++++++++|+||++.+++.|+..+++.+++++.....+.++..+... .+...+..++|+|||++|+|||||
T Consensus 57 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P 136 (456)
T cd07145 57 ERRKEELAKLLTIEVGKPIKQSRVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFP 136 (456)
T ss_pred HHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChH
Confidence 4456677999999999999999999999999999999887766554332211 134567889999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++|++.+.+..|+.|++++.|.||||+.+|+
T Consensus 137 ~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~ 216 (456)
T cd07145 137 ANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGL 216 (456)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999999999999999999997778899999999999999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
.|.+.++++++|+++|+||+||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|
T Consensus 217 ~i~~~aa~~~~~v~lElgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g 296 (456)
T cd07145 217 LIASKAGGTGKKVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVG 296 (456)
T ss_pred HHHHHHhhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+|.++++++||++++.+++++.+++++++++|+++++||..+ .++|++|||+.++++++++++||+||||++|++|+|
T Consensus 297 ~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 374 (456)
T cd07145 297 DPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRD--EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKD 374 (456)
T ss_pred CCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCC--CCeEECCEeecCCCCCChHhhCCCCCceEEEEEECC
Confidence 999999999999999999999999999999999999999764 379999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
++|||+++|++++||++||||+|.+.+.++++++++|+|+||+.+.. .+.+||||+|.||+|+++|++|+++|++.|+|
T Consensus 375 ~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v 454 (456)
T cd07145 375 DEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTI 454 (456)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceeEE
Confidence 99999999999999999999999999999999999999999987653 36799999999999999999999999999998
Q ss_pred EE
Q 015249 403 CL 404 (410)
Q Consensus 403 ~~ 404 (410)
.+
T Consensus 455 ~~ 456 (456)
T cd07145 455 VI 456 (456)
T ss_pred eC
Confidence 64
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-83 Score=651.84 Aligned_cols=397 Identities=44% Similarity=0.682 Sum_probs=374.2
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
.+++.++++++.+|+||++.+++ .|+..+++.+++++.+.++..+...+.. .+...+.+++|+|||++|+|||||+..
T Consensus 55 ~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~i~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~ 133 (453)
T cd07115 55 LANADELARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVR-GPFLNYTVREPVGVVGAIVPWNFPLMF 133 (453)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEecceeEEEEEcCCCCHHHH
Confidence 45667789999999999999997 4999999999999998877665443322 455678999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+.+++.++|+|+++++++++++.+.+..|+.|++++.|+||||+.+|+.|.
T Consensus 134 ~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~ 213 (453)
T cd07115 134 AAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIM 213 (453)
T ss_pred HHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997677889999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.++++++|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|++.|+++++++++|+|.
T Consensus 214 ~~aa~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~ 293 (453)
T cd07115 214 QGAAGNLKRVSLELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPL 293 (453)
T ss_pred HHHhhcCCeEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 326 (410)
++++++||++++.+++++.++|++++++|+++++||......++|++|||+.++++++++++||+||||++|++|+|.||
T Consensus 294 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e 373 (453)
T cd07115 294 DPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEE 373 (453)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHH
Confidence 99999999999999999999999999999999999876433578999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 327 ai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
||+++|+++|||+++|||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|.+++++|++.|+++++
T Consensus 374 ai~~~n~~~~gL~~~ifs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 374 ALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWVN 452 (453)
T ss_pred HHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999999999877778899999999999999999999999999999764
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-83 Score=653.09 Aligned_cols=393 Identities=38% Similarity=0.599 Sum_probs=365.3
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccC----CCCCcceeEEeeec-eEEEEEcCCCc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPA----TLPDRRLFVLKQPV-GVAGAITPWNF 82 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~P~-Gvv~~i~p~n~ 82 (410)
+++++++++++++|+||++.+++.|+..+++.++|++....+..++.... ...+...++.++|+ |||++|+||||
T Consensus 72 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~ 151 (472)
T TIGR03250 72 AARKEEISDLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNH 151 (472)
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcH
Confidence 34456779999999999999999999999999999999887765543221 11234567899997 99999999999
Q ss_pred chhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHH
Q 015249 83 PLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 162 (410)
Q Consensus 83 p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~ 162 (410)
|++..++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|++.+.+..|+.|++++.|.||||+.+|
T Consensus 152 P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g 231 (472)
T TIGR03250 152 PMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIG 231 (472)
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHH
Confidence 99999999999999999999999999999999999999999999999999998777789999999999999999999999
Q ss_pred HHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhccc
Q 015249 163 KKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 242 (410)
Q Consensus 163 ~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~ 242 (410)
+.|.+.++ .+|+++|+||+||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++
T Consensus 232 ~~i~~~a~--~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 309 (472)
T TIGR03250 232 KYIAARAG--YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRY 309 (472)
T ss_pred HHHHHHhc--CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCC
Confidence 99998875 6899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 243 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 243 g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
|+|.++++++||++++.+++++.+++++++.+|+++++||.. .|+|++|||+++++++|++++||+||||++|++|+
T Consensus 310 G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~ 386 (472)
T TIGR03250 310 GDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR---DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFC 386 (472)
T ss_pred CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc---CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeC
Confidence 999999999999999999999999999999999999999865 37899999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCC-CCChHHHHHhhheee
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG-REGSKYGMDEFLEIK 400 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g-~~~g~~~l~~~~~~k 400 (410)
|.+||++++|+++|||++||||+|.+++.++++++++|+||||+.+.. .+.+||||+|.||+| +.+|.+++++||+.|
T Consensus 387 ~~~eai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k 466 (472)
T TIGR03250 387 DIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLK 466 (472)
T ss_pred CHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCCCCChHHHHHHhhceE
Confidence 999999999999999999999999999999999999999999987653 356899999999999 567899999999999
Q ss_pred EEEEe
Q 015249 401 YVCLG 405 (410)
Q Consensus 401 ~v~~~ 405 (410)
+|+++
T Consensus 467 ~i~~~ 471 (472)
T TIGR03250 467 TYSLP 471 (472)
T ss_pred EEEEe
Confidence 99865
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-83 Score=654.50 Aligned_cols=397 Identities=45% Similarity=0.761 Sum_probs=373.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
.+++.++++++++|+||++.+++.|+..+++.+++++.++.+..+...+...++...+.+++|+|||++|+|||||++..
T Consensus 71 ~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~ 150 (468)
T cd07088 71 RENADELAKLIVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLI 150 (468)
T ss_pred HHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHH
Confidence 34566779999999999999999999999999999999887766554433223556789999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|++++++.+.+..|+.|++++.|.||||+.+|+.|.+
T Consensus 151 ~~~~~~AL~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~ 230 (468)
T cd07088 151 ARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIME 230 (468)
T ss_pred HHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977778899999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+||+||+||++|+|++.+++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.+
T Consensus 231 ~aa~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 310 (468)
T cd07088 231 AAAENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFD 310 (468)
T ss_pred HHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceecceEeccCCCCCcccccceecceeeeeecCCHHH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~-~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 326 (410)
+++++||++++.+++++.++|++++.+|+++++||.... .+++|++|||+.++++++++++||+||||++|++|+|+||
T Consensus 311 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 390 (468)
T cd07088 311 AATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDE 390 (468)
T ss_pred CCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHH
Confidence 999999999999999999999999999999999997643 3579999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 015249 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 327 ai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
|++++|+++|||+++|||+|.+.++++++++++|+|+||+.....+..||||+|.||+|+++|++++++||+.|+|++
T Consensus 391 ai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~~ 468 (468)
T cd07088 391 AIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVYL 468 (468)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEeC
Confidence 999999999999999999999999999999999999999987655667999999999999999999999999999864
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-83 Score=651.17 Aligned_cols=395 Identities=40% Similarity=0.631 Sum_probs=371.0
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
.++++++++++.+|+||++.+++.|+..+++.++|++...++..+...+.. ++...+.+++|+|||++|+|||||++..
T Consensus 56 ~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P~~~~ 134 (454)
T cd07109 56 REHADELARLESLDTGKPLTQARADVEAAARYFEYYGGAADKLHGETIPLG-PGYFVYTVREPHGVTGHIIPWNYPLQIT 134 (454)
T ss_pred HhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEeeeeEEEEECCCchHHHHH
Confidence 345667799999999999999999999999999999998877766544322 4567889999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++.+.+.+..|+.|++++.|.||||+.+|+.|.+
T Consensus 135 ~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 214 (454)
T cd07109 135 GRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMR 214 (454)
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877778999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.+
T Consensus 215 ~aa~~~~p~~lElgG~~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~ 294 (454)
T cd07109 215 AAAENVVPVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE 294 (454)
T ss_pred HHhhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~---~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
.+++||++++++++++.+++++++++|+++++||.... ..|+|++|||+.++++++++++||+||||++|++|+|.
T Consensus 295 -~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~ 373 (454)
T cd07109 295 -DPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDE 373 (454)
T ss_pred -cCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCH
Confidence 68999999999999999999999999999999987542 35789999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCC-CCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL-ISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~-~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.. ...+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 374 deAi~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 453 (454)
T cd07109 374 AEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453 (454)
T ss_pred HHHHHHhhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999999999999987 45668899999999999999999999999999986
Q ss_pred E
Q 015249 404 L 404 (410)
Q Consensus 404 ~ 404 (410)
+
T Consensus 454 ~ 454 (454)
T cd07109 454 V 454 (454)
T ss_pred C
Confidence 3
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-83 Score=652.14 Aligned_cols=393 Identities=44% Similarity=0.722 Sum_probs=371.2
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~ 88 (410)
+++.++++++++|+|||+.+++.|+..+++.+++++....+..+...+...++...+.+++|+|||++|+|||||++..+
T Consensus 58 ~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~ 137 (451)
T cd07150 58 RRADDLIDLLIDEGGSTYGKAWFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILAT 137 (451)
T ss_pred HhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHH
Confidence 34556799999999999999999999999999999998877665544332245677899999999999999999999999
Q ss_pred hhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHH
Q 015249 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 168 (410)
Q Consensus 89 ~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~ 168 (410)
+++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.+..|+.|++++.|.||||+.+|+.|.+.
T Consensus 138 ~~~~~ALaaGN~VilKps~~~p~t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 217 (451)
T cd07150 138 KKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEK 217 (451)
T ss_pred HHHHHHHhcCCeEEEECCccCcHHHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998777789999999999999999999999999999
Q ss_pred hccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCCC
Q 015249 169 AAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 248 (410)
Q Consensus 169 ~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~ 248 (410)
++++.+|+++|+||+||+||++|+|++.+++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.++
T Consensus 218 aa~~~~~~~lelGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~ 297 (451)
T cd07150 218 AGRHLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDP 297 (451)
T ss_pred HhhcCCceEeecCCCCeeEECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHHH
Q 015249 249 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 328 (410)
Q Consensus 249 ~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai 328 (410)
++++||++++.+++++.+++++++.+|+++++||.. +++|++|||+.++++++++++||+||||++|++|+|+||||
T Consensus 298 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 374 (451)
T cd07150 298 DTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKY---DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEAL 374 (451)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCcc---CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHH
Confidence 999999999999999999999999999999999865 37899999999999999999999999999999999999999
Q ss_pred HHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 015249 329 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 329 ~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
+++|+++|||+++|||+|.++++++++++++|+|+||+++.. .+.+||||+|.||+|+++|.+++++||+.|+|++
T Consensus 375 ~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~~ 451 (451)
T cd07150 375 ELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWITV 451 (451)
T ss_pred HHHhCCCCCCeEEEEeCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccCcCCcHHHHHHhheeeEEeC
Confidence 999999999999999999999999999999999999998764 4678999999999999999999999999999864
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-83 Score=650.87 Aligned_cols=397 Identities=39% Similarity=0.637 Sum_probs=372.0
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccc-cCC---CCCcceeEEeeeceEEEEEcCCCc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEII-PAT---LPDRRLFVLKQPVGVAGAITPWNF 82 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~n~ 82 (410)
.+++.++++++++|+|||+.++. .|+..+++.++|++....+..++.. +.. ..+...+++++|+|||++|+||||
T Consensus 56 ~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~ 135 (459)
T cd07089 56 EARKEELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNF 135 (459)
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCch
Confidence 34456779999999999998775 5999999999999998877655432 211 134567899999999999999999
Q ss_pred chhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHH
Q 015249 83 PLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 162 (410)
Q Consensus 83 p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~ 162 (410)
|++..++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++|++.+.+..|+.||+++.|.||||+.+|
T Consensus 136 P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g 215 (459)
T cd07089 136 PFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVG 215 (459)
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHH
Confidence 99999999999999999999999999999999999999999999999999999777788999999999999999999999
Q ss_pred HHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhccc
Q 015249 163 KKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 242 (410)
Q Consensus 163 ~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~ 242 (410)
+.|.+.++++++|+++|+||+||+||++|+|++.+++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++
T Consensus 216 ~~v~~~aa~~~~~~~lelgG~n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~ 295 (459)
T cd07089 216 RRIMAQAAATLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPV 295 (459)
T ss_pred HHHHHHHHhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceecceEeccCCCCCcccccceecceeeeee
Q 015249 243 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 320 (410)
Q Consensus 243 g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~--~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~ 320 (410)
|+|.++++++||++++.+++++.+++++++.+|+++++||.... +.++|++|||+.++++++++++||+||||++|++
T Consensus 296 g~p~~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~ 375 (459)
T cd07089 296 GDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIP 375 (459)
T ss_pred CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEec
Confidence 99999999999999999999999999999999999999997643 3579999999999999999999999999999999
Q ss_pred cCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheee
Q 015249 321 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400 (410)
Q Consensus 321 ~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k 400 (410)
|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++++++||+.|
T Consensus 376 ~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k 455 (459)
T cd07089 376 YDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETK 455 (459)
T ss_pred cCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCCCCchHHHHHHhhcee
Confidence 99999999999999999999999999999999999999999999998877788999999999999999999999999999
Q ss_pred EEEE
Q 015249 401 YVCL 404 (410)
Q Consensus 401 ~v~~ 404 (410)
+|+.
T Consensus 456 ~v~~ 459 (459)
T cd07089 456 SIAY 459 (459)
T ss_pred EEeC
Confidence 9863
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-83 Score=658.25 Aligned_cols=396 Identities=30% Similarity=0.498 Sum_probs=369.2
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~ 88 (410)
+++.++++++++|+|||+.+++.|+..+++.++|++...+...++..+....+...+++++|+|||++|+|||||+...+
T Consensus 106 ~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~ 185 (511)
T TIGR01237 106 RRRHELNALICLEVGKIIPEADAEVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAV 185 (511)
T ss_pred HCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHH
Confidence 34566799999999999999999999999999999999887765443322345677899999999999999999999999
Q ss_pred hhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHH
Q 015249 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 168 (410)
Q Consensus 89 ~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~ 168 (410)
+++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.||+++.|.||||+.+|+.|.+.
T Consensus 186 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~ 265 (511)
T TIGR01237 186 GMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYED 265 (511)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777889999999999999999999999999988
Q ss_pred hc------cccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhccc
Q 015249 169 AA------GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 242 (410)
Q Consensus 169 ~~------~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~ 242 (410)
++ ++++|+++|+||+||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++
T Consensus 266 aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~ 345 (511)
T TIGR01237 266 AAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNV 345 (511)
T ss_pred HhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCC
Confidence 87 578999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 243 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 243 g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
|+|.++++++||++++.+++++.+++++++.+| ++++||......|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 346 g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~ 424 (511)
T TIGR01237 346 GPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAA 424 (511)
T ss_pred CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeC
Confidence 999999999999999999999999999999888 8888886543357999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCccCCCCCCCCC-CChHHHHHhhhee
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGR-EGSKYGMDEFLEI 399 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~--~~~~pfGg~~~SG~g~-~~g~~~l~~~~~~ 399 (410)
|.+|||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... .+.+||||+|.||+|+ .+|++++++||+.
T Consensus 425 ~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~ 504 (511)
T TIGR01237 425 DFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQP 504 (511)
T ss_pred CHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhcce
Confidence 999999999999999999999999999999999999999999987652 3568999999999995 6999999999999
Q ss_pred eEEEEe
Q 015249 400 KYVCLG 405 (410)
Q Consensus 400 k~v~~~ 405 (410)
|+|+.+
T Consensus 505 k~v~~~ 510 (511)
T TIGR01237 505 KTVTEN 510 (511)
T ss_pred EEEEEe
Confidence 998764
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-83 Score=648.39 Aligned_cols=392 Identities=39% Similarity=0.611 Sum_probs=367.3
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
.+++.++++++.+|+||+..+++.|+..+++.+++++.+.....+...+. ..+...+.+++|+|||++|+|||||++..
T Consensus 49 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~l~~~~~~~~~~~~~~~~~-~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~ 127 (443)
T cd07152 49 EEHADEIADWIVRESGSIRPKAGFEVGAAIGELHEAAGLPTQPQGEILPS-APGRLSLARRVPLGVVGVISPFNFPLILA 127 (443)
T ss_pred HHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhHHHhCCccccc-cCCceeEEEEecceEEEEECCCCcHHHHH
Confidence 34556779999999999999999999999999999998876554443332 24566788999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~-~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
++++++||++||+||+|||+.+|.++ ..+.++|.++|+|+|++|+++| +.+.+..|+.|++++.|+||||+.+|+.|.
T Consensus 128 ~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~ 206 (443)
T cd07152 128 MRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVG 206 (443)
T ss_pred HHHHHHHHHcCCEEEEECCcccchhHHHHHHHHHHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 99999999999999999999999996 7899999999999999999998 467889999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.++++++++++|+||+||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.
T Consensus 207 ~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~ 286 (443)
T cd07152 207 EAAGRHLKKVSLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPA 286 (443)
T ss_pred HHHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 326 (410)
++++++||++++.+++++.+++++++.+|+++++||.. +++|++|||+.++++++++++||+||||++|++|+|.+|
T Consensus 287 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e 363 (443)
T cd07152 287 TGQVALGPLINARQLDRVHAIVDDSVAAGARLEAGGTY---DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEE 363 (443)
T ss_pred CCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEeccCc---CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHH
Confidence 99999999999999999999999999999999999975 379999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCC-CCChHHHHHhhheeeEEEE
Q 015249 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 327 ai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g-~~~g~~~l~~~~~~k~v~~ 404 (410)
|++++|+++|||+++|||+|.++++++++++++|+|+||+++.. .+.+||||+|.||+| +++|+++|++||+.|++++
T Consensus 364 ai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~~ 443 (443)
T cd07152 364 AVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVTV 443 (443)
T ss_pred HHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCCccCcHHHHHHhhceeEEeC
Confidence 99999999999999999999999999999999999999987764 367999999999999 8889999999999999864
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-83 Score=650.13 Aligned_cols=396 Identities=42% Similarity=0.660 Sum_probs=372.7
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
.+++.++++++.+|+||++.+++.|+..+++.++|++.+.++..++..+.. .+...+++++|+|||++|+|||||+...
T Consensus 55 ~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~p~N~P~~~~ 133 (457)
T cd07090 55 RERNDEIARLETIDNGKPIEEARVDIDSSADCLEYYAGLAPTLSGEHVPLP-GGSFAYTRREPLGVCAGIGAWNYPIQIA 133 (457)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeccC-CCceEEEEEeecceEEEECCCccHHHHH
Confidence 345667799999999999999999999999999999998877655443322 3566789999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++++ .+.+..|+.|++++.|.||||+.+|+.|.+
T Consensus 134 ~~~~~~ALaaGN~Vv~Kps~~~~~~~~~l~~~~~~aGlP~g~~~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 212 (457)
T cd07090 134 SWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFNVVQGG-GETGQLLCEHPDVAKVSFTGSVPTGKKVMS 212 (457)
T ss_pred HHHHHHHHhcCCeeeecCCCcCcHHHHHHHHHHHHcCCCcccEEEEeCC-hhhHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999985 458899999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++.+++|+|.+
T Consensus 213 ~aa~~~~~~~lelgG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 292 (457)
T cd07090 213 AAAKGIKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLD 292 (457)
T ss_pred HHhccCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-----CCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~-----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
+++++||++++.+++++.++|++++.+|+++++||.... .+++|++|||+.++++++++++||+||||++|++|+
T Consensus 293 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~ 372 (457)
T cd07090 293 EDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFD 372 (457)
T ss_pred CCCCcccccCHHHHHHHHHHHHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEEC
Confidence 999999999999999999999999999999999997532 247899999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
|.||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|.+++++||+.|+|
T Consensus 373 ~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~ 452 (457)
T cd07090 373 TEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTV 452 (457)
T ss_pred CHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhCeEEE
Confidence 99999999999999999999999999999999999999999999877677899999999999999999999999999999
Q ss_pred EEe
Q 015249 403 CLG 405 (410)
Q Consensus 403 ~~~ 405 (410)
+++
T Consensus 453 ~~~ 455 (457)
T cd07090 453 YVE 455 (457)
T ss_pred EEe
Confidence 874
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-83 Score=657.49 Aligned_cols=396 Identities=34% Similarity=0.557 Sum_probs=371.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
.+++.++++++++|+||++.+++.|+..+++.++|++...++..+...+. ..+..++++++|+|||++|+|||||++..
T Consensus 105 ~~~~~~la~~~~~e~Gk~~~ea~~ev~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~pwN~P~~~~ 183 (512)
T cd07124 105 RRRRFELAAWMVLEVGKNWAEADADVAEAIDFLEYYAREMLRLRGFPVEM-VPGEDNRYVYRPLGVGAVISPWNFPLAIL 183 (512)
T ss_pred HHCHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeEEEEecceEEEEECCCChHHHHH
Confidence 34456779999999999999999999999999999999988775544332 23567789999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.||+++.|.||||+.+|+.|.+
T Consensus 184 ~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~ 263 (512)
T cd07124 184 AGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYE 263 (512)
T ss_pred HHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977788999999999999999999999999999
Q ss_pred Hhcc------ccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcc
Q 015249 168 GAAG------TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 241 (410)
Q Consensus 168 ~~~~------~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~ 241 (410)
.+++ +++|+++|+||+||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++++++
T Consensus 264 ~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~ 343 (512)
T cd07124 264 RAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALK 343 (512)
T ss_pred HHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCC
Confidence 9886 6899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceecceEeccCCCCCcccccceecceeeee
Q 015249 242 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLL 319 (410)
Q Consensus 242 ~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~--~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~ 319 (410)
+|+|.|+++++||++++.+++++.++|++++. |+++++||.... ++|+|++|||+.++++++++++||+||||++|+
T Consensus 344 ~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~ 422 (512)
T cd07124 344 VGDPEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVI 422 (512)
T ss_pred CCCCCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEE
Confidence 99999999999999999999999999999998 899999997653 258999999999999999999999999999999
Q ss_pred ecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCCCCCCCC-CCChHHHHHhh
Q 015249 320 CFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLG-REGSKYGMDEF 396 (410)
Q Consensus 320 ~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pfGg~~~SG~g-~~~g~~~l~~~ 396 (410)
+|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.+. ..+.+||||+|.||+| +++|.+++++|
T Consensus 423 ~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~ 502 (512)
T cd07124 423 KAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQF 502 (512)
T ss_pred ecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHHh
Confidence 99999999999999999999999999999999999999999999998764 2467999999999999 78999999999
Q ss_pred heeeEEEEe
Q 015249 397 LEIKYVCLG 405 (410)
Q Consensus 397 ~~~k~v~~~ 405 (410)
|+.|+|+++
T Consensus 503 t~~k~v~~~ 511 (512)
T cd07124 503 MQPKTVTEN 511 (512)
T ss_pred ccEEEEEEe
Confidence 999999875
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-83 Score=648.98 Aligned_cols=396 Identities=44% Similarity=0.698 Sum_probs=372.9
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~ 88 (410)
+++.++++++++|+||++.+++.|+..+++.+++++.+.++..++..+....+...+..++|+|||++|+|||||++..+
T Consensus 58 ~~~~~l~~~~~~e~Gk~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~ 137 (457)
T cd07114 58 ANAEELAELETRDNGKLIRETRAQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLA 137 (457)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHH
Confidence 34567789999999999999999999999999999988877655443322245567889999999999999999999999
Q ss_pred hhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHH
Q 015249 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 168 (410)
Q Consensus 89 ~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~ 168 (410)
+++++||++||+||+|||+.+|.++..++++|.++|+|+|++|++++++.+.+..|+.|++++.|.||||+.+++.+.+.
T Consensus 138 ~~~~~AL~aGN~Vilkps~~~p~~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~ 217 (457)
T cd07114 138 KKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARA 217 (457)
T ss_pred HHHHHHHhcCCeEEeECCccchHHHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777788999999999999999999999999999
Q ss_pred hccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCCC
Q 015249 169 AAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 248 (410)
Q Consensus 169 ~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~ 248 (410)
++++.+|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++++|+++|+++++++++|+|.++
T Consensus 218 aa~~~~~~~lelgG~~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~ 297 (457)
T cd07114 218 AAENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDP 297 (457)
T ss_pred HHhcCCeEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 249 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 249 ~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
++++||++++.+.+++.+++++++++|+++++||.... ..|+|++|||+.++++++++++||+||||++|++|+|.
T Consensus 298 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 377 (457)
T cd07114 298 ETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDE 377 (457)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCH
Confidence 99999999999999999999999999999999997642 24789999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.....+.+||||.|.||+|+++|.+++++|++.|++++
T Consensus 378 deai~~~n~~~~gL~~~ift~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~ 457 (457)
T cd07114 378 EEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVWI 457 (457)
T ss_pred HHHHHHhhCCCcCceeEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceeEEeC
Confidence 99999999999999999999999999999999999999999987777889999999999999999999999999999864
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-83 Score=651.74 Aligned_cols=398 Identities=43% Similarity=0.714 Sum_probs=373.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
.++++++++++++|+|||+.+++.|+..+++.+++++...+...++..+....+...+.+++|+|||++|+|||||+...
T Consensus 73 ~~~~~ela~~~~~e~Gk~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 152 (478)
T cd07131 73 KKRKEELARLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIP 152 (478)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHH
Confidence 35566779999999999999999999999999999998887765544332223446789999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|++++++.+.+..|+.||+++.|.||||+.+|+.|.+
T Consensus 153 ~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~ 232 (478)
T cd07131 153 SWKIFPALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGE 232 (478)
T ss_pred HHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877778999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++.+|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.+
T Consensus 233 ~aa~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 312 (478)
T cd07131 233 TCARPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLD 312 (478)
T ss_pred HHhhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+++++||++++.+++++.+++++++.+|+++++||.... .+++|++|||+.++++++++++||+||||++|++|+|
T Consensus 313 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~ 392 (478)
T cd07131 313 EETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSS 392 (478)
T ss_pred CCCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCC
Confidence 999999999999999999999999999999999996532 2578999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCCCCCCCC-CCChHHHHHhhheeeE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLG-REGSKYGMDEFLEIKY 401 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pfGg~~~SG~g-~~~g~~~l~~~~~~k~ 401 (410)
.||||+++|+++|||+++|||+|.++++++++++++|+|+||+.+. ..+.+||||+|.||+| +++|.+|+++||+.|+
T Consensus 393 ~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~ 472 (478)
T cd07131 393 LEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKA 472 (478)
T ss_pred HHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCCcCCcHHHHHHhhheEE
Confidence 9999999999999999999999999999999999999999998876 3578999999999999 7889999999999999
Q ss_pred EEEe
Q 015249 402 VCLG 405 (410)
Q Consensus 402 v~~~ 405 (410)
|+++
T Consensus 473 i~~~ 476 (478)
T cd07131 473 VYVD 476 (478)
T ss_pred EEEe
Confidence 9875
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-83 Score=649.51 Aligned_cols=395 Identities=41% Similarity=0.648 Sum_probs=370.9
Q ss_pred HHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLR-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
+++.++++++++|+||++.+++. |+..+++.++|++...+++.++..+. ..+...++.++|+|||++|+|||||+...
T Consensus 63 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GvV~~i~p~N~P~~~~ 141 (462)
T cd07112 63 AHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPT-GPDALALITREPLGVVGAVVPWNFPLLMA 141 (462)
T ss_pred HhHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecC-CCCeEEEEEEeeeeeEEEECCCchHHHHH
Confidence 34566799999999999999975 99999999999999988776543332 23456778999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.|++++.|.||||+.+|+.|++
T Consensus 142 ~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~ 221 (462)
T cd07112 142 AWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLE 221 (462)
T ss_pred HHHHHHHHHcCCeeeeeCCCCCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977788999999999999999999999999999
Q ss_pred Hhc-cccceeeeeccCCCcEEeccCC-CHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 168 GAA-GTVKKVSLELGGNAPCIVFDDA-DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 168 ~~~-~~~~~~~~e~gg~~~~iV~~~a-dl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
.++ .+++|+++|+||+||+||++|+ |++.+++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 222 ~aa~~~~~~~~lelgG~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p 301 (462)
T cd07112 222 YSGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDP 301 (462)
T ss_pred HHHHhcCCEEEecCCCCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCC
Confidence 888 4889999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~--~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+++++++||++++.+++++.++|++++++|+++++||.... .+++|++|||+.++++++++++||+||||++|++|+|
T Consensus 302 ~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~ 381 (462)
T cd07112 302 LDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDS 381 (462)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCC
Confidence 99999999999999999999999999999999999987542 2478999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
.+|||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.....+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 382 ~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 461 (462)
T cd07112 382 EEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKTTW 461 (462)
T ss_pred HHHHHHHHhCCCccceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhceeEEE
Confidence 99999999999999999999999999999999999999999998777788999999999999999999999999999986
Q ss_pred E
Q 015249 404 L 404 (410)
Q Consensus 404 ~ 404 (410)
+
T Consensus 462 ~ 462 (462)
T cd07112 462 I 462 (462)
T ss_pred C
Confidence 4
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-83 Score=646.98 Aligned_cols=392 Identities=41% Similarity=0.616 Sum_probs=367.0
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
.+++.++++++++|+||++.+++.|+..+++.+++++.... .++... ...+...+.+++|+|||++|+|||||++..
T Consensus 55 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~--~~~~~~-~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 131 (446)
T cd07106 55 EANAEELARLLTLEQGKPLAEAQFEVGGAVAWLRYTASLDL--PDEVIE-DDDTRRVELRRKPLGVVAAIVPWNFPLLLA 131 (446)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhh--cCcccc-CCCCceEEEEEEcceEEEEEcCCChHHHHH
Confidence 34456679999999999999999999999999999988763 222222 123556789999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++++++++ .+.+..|+.|++++.|.||||+.+|+.|.+
T Consensus 132 ~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~-~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~ 209 (446)
T cd07106 132 AWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLNVVSGG-DELGPALTSHPDIRKISFTGSTATGKKVMA 209 (446)
T ss_pred HHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHh-CCcCeEEEeeCC-hhHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 999999999999999999999999999999999996 999999999984 568899999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.+
T Consensus 210 ~aa~~~~~~~lElGG~~p~iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~ 289 (446)
T cd07106 210 SAAKTLKRVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLD 289 (446)
T ss_pred HHHhcCCeeEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ea 327 (410)
+++++||++++.+++++.++++++..+|+++++||...+..|+|++|||+.++++++++++||+||||++|++|+|++||
T Consensus 290 ~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~ea 369 (446)
T cd07106 290 PGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEV 369 (446)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHH
Confidence 99999999999999999999999999999999999765334789999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 015249 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 328 i~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
|+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 370 i~~~n~~~~gL~~~i~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~~ 446 (446)
T cd07106 370 IARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVINI 446 (446)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceeEEeC
Confidence 99999999999999999999999999999999999999988778899999999999999999999999999999863
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-83 Score=650.76 Aligned_cols=391 Identities=42% Similarity=0.683 Sum_probs=367.8
Q ss_pred HHHHHHHHHHHHHhhchHHHH-HHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLL-LREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a-~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
+++.++++++++|+||++.++ ..|+..+++.++|++...++..++..+... ....+..++|+|||++|+|||||+...
T Consensus 72 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~~~~~~~~~P~Gvv~~I~p~N~P~~~~ 150 (467)
T TIGR01804 72 ERNEELAKLETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPI-PSFSYTIREPLGVCVGIGAWNYPLQIA 150 (467)
T ss_pred HhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCC-CceEEEEEeeeeEEEEECCCchHHHHH
Confidence 445667999999999999999 679999999999999988876655433222 245678999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|++++++.+.+..|+.|++++.|.||||+.+|+.|.+
T Consensus 151 ~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~ 230 (467)
T TIGR01804 151 SWKIAPALAAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMA 230 (467)
T ss_pred HHHHHHHHhcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999876788999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++++++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.+
T Consensus 231 ~a~~~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 310 (467)
T TIGR01804 231 AAADHLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFD 310 (467)
T ss_pred HHHhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+++++||++++.+.+++.+++++++.+|+++++||.... .+|+|++|||+.++++++++++||+||||++|++|+|
T Consensus 311 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 390 (467)
T TIGR01804 311 EATEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSS 390 (467)
T ss_pred CCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCC
Confidence 999999999999999999999999999999999997542 2478999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheee
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k 400 (410)
.||||+++|+++|||+++|||+|.+++.++++++++|+|+||++....+.+||||+|+||+|+++|.+++++||+.|
T Consensus 391 ~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 391 EDEVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIGRENGKAGLAEYTEVK 467 (467)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999998777778999999999999999999999999875
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-83 Score=655.68 Aligned_cols=396 Identities=25% Similarity=0.382 Sum_probs=366.0
Q ss_pred HHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeec-eEEEEEcCCCcchhhh
Q 015249 10 QKMLYLRLLMRLILGASSLLLR-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV-GVAGAITPWNFPLAMI 87 (410)
Q Consensus 10 ~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-Gvv~~i~p~n~p~~~~ 87 (410)
++.+++.++++|+||++.+++. |+..+++.++|++.++.++.+........+...+++++|+ |||++|+|||||+...
T Consensus 108 ~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~ 187 (522)
T cd07123 108 YRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGG 187 (522)
T ss_pred CHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHHH
Confidence 4677788999999999999875 8999999999999988776654433222355678999998 9999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
.+++++|| +||+||+|||+.+|.++..+.++|.++|+|+|++|+++|++.+.+..|+.|++++.|+||||+++|+.|++
T Consensus 188 ~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~ 266 (522)
T cd07123 188 NLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWK 266 (522)
T ss_pred HHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 69999999999999999999999999999999999999977778999999999999999999999999999
Q ss_pred Hhccccc------eeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcc
Q 015249 168 GAAGTVK------KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 241 (410)
Q Consensus 168 ~~~~~~~------~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~ 241 (410)
.++++++ ++++|+||+||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 267 ~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~ 346 (522)
T cd07123 267 QIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIK 346 (522)
T ss_pred HHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCc
Confidence 9998876 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHHC-CCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeee
Q 015249 242 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSK-GAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 320 (410)
Q Consensus 242 ~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~-ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~ 320 (410)
+|+|.|+++++||++++.+++++.+++++++++ |+++++||.....+|+|++|||+.+++++|++++||+||||++|++
T Consensus 347 ~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~~ 426 (522)
T cd07123 347 MGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYV 426 (522)
T ss_pred cCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEEE
Confidence 999999999999999999999999999999999 9999999865423579999999999999999999999999999999
Q ss_pred cCC--HHHHHHHhhcCC-CCcEEEEecCCHHHHHHHHhhc--ceeEEEECCCCCC--CCCCCccCCCCCCCC-CCChHHH
Q 015249 321 FKT--EEEAIHMANDTN-AGLAAYIFTNNLQRTWRVSEAL--EYGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYG 392 (410)
Q Consensus 321 ~~~--~~eai~~~n~~~-~gl~~sv~s~d~~~~~~~~~~~--~~g~v~iN~~~~~--~~~~pfGg~~~SG~g-~~~g~~~ 392 (410)
|+| .+|+|+++|++. |||++||||+|.+.+.++++++ ++|+|+||+.... .+.+||||+|.||+| +++|+++
T Consensus 427 ~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g~~~ 506 (522)
T cd07123 427 YPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGSPLN 506 (522)
T ss_pred eCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccCCHHH
Confidence 995 799999999985 9999999999999999999996 5999999987653 457899999999996 9999999
Q ss_pred HHhhheeeEEEEec
Q 015249 393 MDEFLEIKYVCLGD 406 (410)
Q Consensus 393 l~~~~~~k~v~~~~ 406 (410)
+++|++.|+++..-
T Consensus 507 l~~~~~~k~~~~~~ 520 (522)
T cd07123 507 LLRWVSPRTIKETF 520 (522)
T ss_pred HHHhcceEEEEEec
Confidence 99999999987653
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-83 Score=656.42 Aligned_cols=396 Identities=26% Similarity=0.384 Sum_probs=367.0
Q ss_pred HHHHHHHHHHHHhhchHHHHHHH-HHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeec-eEEEEEcCCCcchhhh
Q 015249 10 QKMLYLRLLMRLILGASSLLLRE-VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV-GVAGAITPWNFPLAMI 87 (410)
Q Consensus 10 ~~~~~~~~~~~e~g~~~~~a~~e-i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-Gvv~~i~p~n~p~~~~ 87 (410)
+++++++++++|+||++.+++.| +..+++.++|++.++.++.++.......+..+++.++|+ |||++|+|||||+...
T Consensus 108 ~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~ 187 (533)
T TIGR01236 108 YREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAIAG 187 (533)
T ss_pred cHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHHHH
Confidence 56677899999999999999986 999999999999988777654331122455678999999 9999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
.+++++|| +||+||+|||+.+|.++..+.++|.++|+|+|++|+++|++.+.+..|+.||+++.|+||||+.+|+.|++
T Consensus 188 ~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~~ 266 (533)
T TIGR01236 188 NLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLWK 266 (533)
T ss_pred HHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 89999999999999999999999999999999999999977788999999999999999999999999999
Q ss_pred Hhccccc------eeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcc
Q 015249 168 GAAGTVK------KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 241 (410)
Q Consensus 168 ~~~~~~~------~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~ 241 (410)
.++++++ ++++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 267 ~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~ 346 (533)
T TIGR01236 267 WVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELAEVK 346 (533)
T ss_pred HHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhcCC
Confidence 9998886 4999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHHCC--CeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeee
Q 015249 242 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKG--AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLL 319 (410)
Q Consensus 242 ~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~g--a~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~ 319 (410)
+|+|.|+++++||++++.+++++.+++++++++| +++++||.....+|+|++|||+.+++++|++++||+||||++|+
T Consensus 347 ~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~v~ 426 (533)
T TIGR01236 347 VGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLTVY 426 (533)
T ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEEEE
Confidence 9999999999999999999999999999999987 79999987643357999999999999999999999999999999
Q ss_pred ecCCH--HHHHHHh-hcCCCCcEEEEecCCHHHHHHHHhhcc--eeEEEECCCCCC--CCCCCccCCCCCCCC-CCChHH
Q 015249 320 CFKTE--EEAIHMA-NDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKY 391 (410)
Q Consensus 320 ~~~~~--~eai~~~-n~~~~gl~~sv~s~d~~~~~~~~~~~~--~g~v~iN~~~~~--~~~~pfGg~~~SG~g-~~~g~~ 391 (410)
+|+|. +||++++ |+++|||+++|||+|.+.+.+++++++ +|+|+||..+.. .+.+||||+|.||+| +++|.+
T Consensus 427 ~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~ 506 (533)
T TIGR01236 427 VYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTNDKAGGPL 506 (533)
T ss_pred EeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCcccCCHH
Confidence 99994 9999999 889999999999999999999999977 999999976653 467899999999998 899999
Q ss_pred HHHhhheeeEEEEec
Q 015249 392 GMDEFLEIKYVCLGD 406 (410)
Q Consensus 392 ~l~~~~~~k~v~~~~ 406 (410)
++++|++.|+++..-
T Consensus 507 ~l~~f~~~k~v~~~~ 521 (533)
T TIGR01236 507 NLLRWTSARSIKETF 521 (533)
T ss_pred HHHHhcceEEEEEEc
Confidence 999999999988753
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-83 Score=647.64 Aligned_cols=395 Identities=33% Similarity=0.491 Sum_probs=371.1
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~ 88 (410)
+++.++++++++|+||+..+++.|+..+++.++|++....+..+........+...+.+++|+|||++|+|||||++..+
T Consensus 55 ~~~~~l~~~~~~e~Gk~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~ 134 (452)
T cd07102 55 ANTDEIAEELTWQMGRPIAQAGGEIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAV 134 (452)
T ss_pred HCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHH
Confidence 34566799999999999999999999999999999998877655433222345567889999999999999999999999
Q ss_pred hhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHH
Q 015249 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 168 (410)
Q Consensus 89 ~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~ 168 (410)
+++++||++||+||+|||+.+|.++..|.++|.++|+|+|++|++++++ +.+..|+.|++++.|.||||+.+|+.|.+.
T Consensus 135 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~ 213 (452)
T cd07102 135 NAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGSVAGGRAIQRA 213 (452)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999965 788999999999999999999999999999
Q ss_pred hccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCCC
Q 015249 169 AAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 248 (410)
Q Consensus 169 ~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~ 248 (410)
++++.+|+.+|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.++
T Consensus 214 a~~~~~~v~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~ 293 (452)
T cd07102 214 AAGRFIKVGLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDP 293 (452)
T ss_pred HHhcCCcEEEECCCCCceEEcCCCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 99899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 249 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 249 ~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~---~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
++++||++++.+++++.+++++++.+|+++++||.... ..++|++|||+.+++++|++++||+||||++|++|+|.|
T Consensus 294 ~~~~gpli~~~~~~~i~~~i~~a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ 373 (452)
T cd07102 294 STTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDA 373 (452)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHH
Confidence 99999999999999999999999999999999986531 357999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
|||+++|+++|||+++|||+|.+++.++++++++|+|+||+....++.+||||+|+||+|+++|.+++++||+.|++++
T Consensus 374 eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~~ 452 (452)
T cd07102 374 EAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYHL 452 (452)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceeEEeC
Confidence 9999999999999999999999999999999999999999987777789999999999999999999999999999864
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-83 Score=647.64 Aligned_cols=391 Identities=44% Similarity=0.703 Sum_probs=367.5
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCC----CCcceeEEeeeceEEEEEcCCCcch
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATL----PDRRLFVLKQPVGVAGAITPWNFPL 84 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~p~ 84 (410)
+++.++++++++|+||++.+++.|+..+++.+++++....++.++..+... .+...+..++|+|||++|+|||||+
T Consensus 58 ~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~ 137 (453)
T cd07094 58 KRAEEFAKIIACEGGKPIKDARVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPL 137 (453)
T ss_pred HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHH
Confidence 445567999999999999999999999999999999988777655433221 2455678899999999999999999
Q ss_pred hhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHH
Q 015249 85 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 164 (410)
Q Consensus 85 ~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~ 164 (410)
...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++|++.+.+..|+.||+++.|.||||+.+|+.
T Consensus 138 ~~~~~~~~~AL~aGN~VI~Kps~~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~ 217 (453)
T cd07094 138 NLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEA 217 (453)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999977778999999999999999999999999
Q ss_pred HHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCC
Q 015249 165 LMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244 (410)
Q Consensus 165 i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~ 244 (410)
|.+.+ ..+|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+
T Consensus 218 v~~~a--~~~~~~lelGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~ 295 (453)
T cd07094 218 LRANA--GGKRIALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGD 295 (453)
T ss_pred HHHHc--CCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence 99987 6789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 245 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 245 ~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
|.++++++||++++.+++++.+++++++++|+++++||.. +++|++|||+.+++++|++++||+||||++|++|+|.
T Consensus 296 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~ 372 (453)
T cd07094 296 PLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGER---DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDF 372 (453)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCccC---CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCH
Confidence 9999999999999999999999999999999999999865 3789999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
+|||+++|+++|||++||||+|.+++.++++++++|+|+||++... .+.+||||+|+||+|+++|++|+++|++.|+|+
T Consensus 373 ~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~ 452 (453)
T cd07094 373 EEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV 452 (453)
T ss_pred HHHHHHHhCCCCCCeeEEECCCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccCcCChHHHHHHHhceeEEe
Confidence 9999999999999999999999999999999999999999998654 578999999999999999999999999999986
Q ss_pred E
Q 015249 404 L 404 (410)
Q Consensus 404 ~ 404 (410)
+
T Consensus 453 ~ 453 (453)
T cd07094 453 I 453 (453)
T ss_pred C
Confidence 4
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-83 Score=646.65 Aligned_cols=395 Identities=39% Similarity=0.612 Sum_probs=367.0
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccc-cCCC-CCcceeEEeeeceEEEEEcCCCcchh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEII-PATL-PDRRLFVLKQPVGVAGAITPWNFPLA 85 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~P~Gvv~~i~p~n~p~~ 85 (410)
++++.++++++++|+||++.++..|+..+++.++|++....+...... +... .....+.+++|+|||++|+|||||+.
T Consensus 54 ~~~~~el~~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~ 133 (454)
T cd07101 54 LERRDELLDLIQLETGKARRHAFEEVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLT 133 (454)
T ss_pred HHhHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHH
Confidence 456677899999999999999999999999999999988877654322 1111 13467889999999999999999999
Q ss_pred hhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHH
Q 015249 86 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 165 (410)
Q Consensus 86 ~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i 165 (410)
..++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.| ++.|.||||+.+|+.|
T Consensus 134 ~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i 211 (454)
T cd07101 134 LAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVV 211 (454)
T ss_pred HHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999777888999986 5789999999999999
Q ss_pred HHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 166 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 166 ~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
.+.++++.+|+++|+||+||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 212 ~~~aa~~~~~~~lElgG~~p~iV~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~ 291 (454)
T cd07101 212 AERAGRRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAA 291 (454)
T ss_pred HHHHHhcCCcEEEECCCCceEEECCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~-~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
.++++++||++++.+++++.+++++++++|+++++||.... .+++|++|||+.++++++++++||+||||++|++|+|.
T Consensus 292 ~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 371 (454)
T cd07101 292 LDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADD 371 (454)
T ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCH
Confidence 99999999999999999999999999999999999986532 24789999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC---CCCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI---STEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 401 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~---~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~ 401 (410)
||||+++|+++|||+++|||+|.+++.++++++++|+|+||+... ..+.+||||+|.||+|+++|.+++++||+.|+
T Consensus 372 ~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~ 451 (454)
T cd07101 372 DEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQT 451 (454)
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEE
Confidence 999999999999999999999999999999999999999998754 34678999999999999999999999999999
Q ss_pred EEE
Q 015249 402 VCL 404 (410)
Q Consensus 402 v~~ 404 (410)
|++
T Consensus 452 v~~ 454 (454)
T cd07101 452 VAV 454 (454)
T ss_pred EeC
Confidence 864
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-83 Score=649.48 Aligned_cols=395 Identities=37% Similarity=0.594 Sum_probs=370.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
+++++++++++++|+|||+.++. .|+..+++.++|++...+++.++..+.. .+...++.++|+|||++|+|||||+..
T Consensus 95 ~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~ 173 (494)
T PRK09847 95 EAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTS-SHELAMIVREPVGVIAAIVPWNFPLLL 173 (494)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEecceeEEEEECCCccHHHH
Confidence 34556779999999999999875 5999999999999999888766544332 344568899999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
+++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.|++++.|.||||+.+|+.|.
T Consensus 174 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~ 253 (494)
T PRK09847 174 TCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLL 253 (494)
T ss_pred HHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987778899999999999999999999999999
Q ss_pred HHhc-cccceeeeeccCCCcEEeccCC-CHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCC
Q 015249 167 AGAA-GTVKKVSLELGGNAPCIVFDDA-DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244 (410)
Q Consensus 167 ~~~~-~~~~~~~~e~gg~~~~iV~~~a-dl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~ 244 (410)
+.++ .+.+|+++|+||+||+||.+|+ |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++.+++|+
T Consensus 254 ~~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~ 333 (494)
T PRK09847 254 KDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGH 333 (494)
T ss_pred HHhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCC
Confidence 9888 5889999999999999999997 9999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 245 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 245 ~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
|.++++++||++++.+++++.++|++++++| ++++||... ..+.|++|||+.++++++++++||+||||++|++|+|.
T Consensus 334 p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 411 (494)
T PRK09847 334 PLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNA-GLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSE 411 (494)
T ss_pred CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccC-CCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCH
Confidence 9999999999999999999999999999999 999998764 34679999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
+|||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.....+.+||||+|.||+|+++|.+++++||+.|+|++
T Consensus 412 ~eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~ 491 (494)
T PRK09847 412 EQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWI 491 (494)
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccCccchHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999999999999987767789999999999999999999999999999987
Q ss_pred e
Q 015249 405 G 405 (410)
Q Consensus 405 ~ 405 (410)
.
T Consensus 492 ~ 492 (494)
T PRK09847 492 S 492 (494)
T ss_pred e
Confidence 5
|
|
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-83 Score=649.42 Aligned_cols=392 Identities=35% Similarity=0.558 Sum_probs=363.8
Q ss_pred HHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhh
Q 015249 10 QKMLYLRLLMRLILGASSLLLR-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88 (410)
Q Consensus 10 ~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~ 88 (410)
++.++++++++|+||++.+++. |+..+++.++|++.......+...+. ..+...+++++|+|||++|+|||||+...+
T Consensus 76 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 154 (479)
T cd07116 76 NLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEI-DENTVAYHFHEPLGVVGQIIPWNFPLLMAT 154 (479)
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecC-CCCceEEEEEeccceEEEECCCchHHHHHH
Confidence 4456789999999999999984 99999999999999887655443222 234456789999999999999999999999
Q ss_pred hhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHH
Q 015249 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 168 (410)
Q Consensus 89 ~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~ 168 (410)
+++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|.+.+.+..|+.||+|+.|.||||+.+|+.|.+.
T Consensus 155 ~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~ 233 (479)
T cd07116 155 WKLAPALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQY 233 (479)
T ss_pred HHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999998 99999999998777889999999999999999999999999999
Q ss_pred hccccceeeeeccCCCcEEeccC------CCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhccc
Q 015249 169 AAGTVKKVSLELGGNAPCIVFDD------ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 242 (410)
Q Consensus 169 ~~~~~~~~~~e~gg~~~~iV~~~------adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~ 242 (410)
++++++|+++|+||+||+||++| +|++.|++.++++. +++||.|++++|||||++++|+|+++|.++++++++
T Consensus 234 aa~~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~ 312 (479)
T cd07116 234 ASENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQ 312 (479)
T ss_pred HHcCCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999987 79999999999865 589999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceecceEeccCCCCCcccccceecceeee
Q 015249 243 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPL 318 (410)
Q Consensus 243 g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v 318 (410)
|+|.++++++||++++.+++++.++|++++.+|+++++||.... .+|+|+.|||+.+++ ++++++||+||||++|
T Consensus 313 G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v 391 (479)
T cd07116 313 GNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAV 391 (479)
T ss_pred CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEE
Confidence 99999999999999999999999999999999999999997542 247899999998874 9999999999999999
Q ss_pred eecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhhe
Q 015249 319 LCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLE 398 (410)
Q Consensus 319 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~ 398 (410)
++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+.....+.+||||+|.||+|+++|.++|++||+
T Consensus 392 ~~~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~ 471 (479)
T cd07116 392 TTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQ 471 (479)
T ss_pred EEeCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999887777789999999999999999999999999
Q ss_pred eeEEEEe
Q 015249 399 IKYVCLG 405 (410)
Q Consensus 399 ~k~v~~~ 405 (410)
.|+|+++
T Consensus 472 ~k~~~~~ 478 (479)
T cd07116 472 TKNLLVS 478 (479)
T ss_pred eEEEEEe
Confidence 9999763
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-82 Score=647.50 Aligned_cols=395 Identities=39% Similarity=0.619 Sum_probs=368.0
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
++++.++++++++|+||++.++. .|+..+++.+++++...+............+...+.+++|+|||++|+|||||+..
T Consensus 74 ~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~ 153 (471)
T cd07139 74 EARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFL 153 (471)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHH
Confidence 34567779999999999998775 49999999999999988765432221111345678899999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++ +.+.+..|+.|++++.|.||||+.+|+.|.
T Consensus 154 ~~~~i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~ 232 (471)
T cd07139 154 AALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIA 232 (471)
T ss_pred HHHHHHHHHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998 466889999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.++++++|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.
T Consensus 233 ~~~~~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~ 312 (471)
T cd07139 233 AVCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPL 312 (471)
T ss_pred HHHHhcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~--~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
++++++||++++.+++++.+++++++.+|+++++||.... ..++|++|||+.++++++++++||+||||++|++|+|.
T Consensus 313 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 392 (471)
T cd07139 313 DPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDE 392 (471)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCH
Confidence 9999999999999999999999999999999999997542 24789999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
|||++++|++++||+++|||+|.+.+.++++++++|+|+||+.. ..+.+||||+|.||+|+++|++|+++||+.|+|++
T Consensus 393 ~eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~~ 471 (471)
T cd07139 393 DDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIYL 471 (471)
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCCccchHHHHHHHhceeEEeC
Confidence 99999999999999999999999999999999999999999876 56789999999999999999999999999999863
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-82 Score=648.49 Aligned_cols=396 Identities=30% Similarity=0.489 Sum_probs=369.0
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc-CCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIP-ATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++++++++.+|+||++.+++.|+..+++.++|++..+.+..+.... ....+...+++++|+|||++|+|||||+...
T Consensus 92 ~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~ 171 (500)
T cd07083 92 RRRRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIF 171 (500)
T ss_pred hCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHHHH
Confidence 345677999999999999999999999999999999998877654321 1224566788999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.|++++.|.||||+.+|+.|.+
T Consensus 172 ~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~ 251 (500)
T cd07083 172 TGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYE 251 (500)
T ss_pred HHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977788999999999999999999999999999
Q ss_pred Hhcccc------ceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcc
Q 015249 168 GAAGTV------KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 241 (410)
Q Consensus 168 ~~~~~~------~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~ 241 (410)
.++++. +|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|++++++++
T Consensus 252 ~aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 331 (500)
T cd07083 252 AAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAERLS 331 (500)
T ss_pred HHhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHcCC
Confidence 998876 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeec
Q 015249 242 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 321 (410)
Q Consensus 242 ~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~ 321 (410)
+|+|.++++++||++++.+++++.+++++++..| ++++||...+..|+|++|||+.++++++++++||+||||++|++|
T Consensus 332 ~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~ 410 (500)
T cd07083 332 VGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRY 410 (500)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEe
Confidence 9999999999999999999999999999999877 999998765335789999999999999999999999999999999
Q ss_pred C--CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCccCCCCCCCC-CCChHHHHHhh
Q 015249 322 K--TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGMDEF 396 (410)
Q Consensus 322 ~--~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~--~~~~pfGg~~~SG~g-~~~g~~~l~~~ 396 (410)
+ |.+|||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.+.. .+.+||||+|.||+| +.+|++++++|
T Consensus 411 ~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~ 490 (500)
T cd07083 411 KDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRF 490 (500)
T ss_pred CCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHHHh
Confidence 9 999999999999999999999999999999999999999999987653 357899999999999 68999999999
Q ss_pred heeeEEEEe
Q 015249 397 LEIKYVCLG 405 (410)
Q Consensus 397 ~~~k~v~~~ 405 (410)
|+.|+++.+
T Consensus 491 ~~~k~~~~~ 499 (500)
T cd07083 491 LEMKAVAER 499 (500)
T ss_pred hheeEEEEc
Confidence 999998753
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-82 Score=650.36 Aligned_cols=395 Identities=40% Similarity=0.619 Sum_probs=367.7
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccC-C-CCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPA-T-LPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
+++.++++++++|+||++.++..|+..++..++|++..+....+..... . ......+..++|+|||++|+|||||++.
T Consensus 91 ~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~ 170 (524)
T PRK09407 91 ENREELLDLVQLETGKARRHAFEEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTL 170 (524)
T ss_pred HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHH
Confidence 3456789999999999999999999999999999999887765533211 1 1124678899999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.| ++.|.||||+.+|+.|.
T Consensus 171 ~~~~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~ 248 (524)
T PRK09407 171 AVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLA 248 (524)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999777788889876 78899999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.++++.+++++|+||+||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.
T Consensus 249 ~~aa~~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 328 (524)
T PRK09407 249 EQAGRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGY 328 (524)
T ss_pred HHHHhcCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~-~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
++++++||++++.+++++.+++++++++|+++++||.... .+++|++|||+.++++++++++||+||||++|++|+|.|
T Consensus 329 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~d 408 (524)
T PRK09407 329 DYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVD 408 (524)
T ss_pred CcCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHH
Confidence 9999999999999999999999999999999999986532 257999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC---CCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI---STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~---~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
|||+++|+++|||++||||+|.+++.++++++++|.|+||+... ..+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus 409 eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v 488 (524)
T PRK09407 409 EAVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTI 488 (524)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEE
Confidence 99999999999999999999999999999999999999998654 346789999999999999999999999999999
Q ss_pred EEe
Q 015249 403 CLG 405 (410)
Q Consensus 403 ~~~ 405 (410)
+++
T Consensus 489 ~~~ 491 (524)
T PRK09407 489 ATQ 491 (524)
T ss_pred EEc
Confidence 876
|
|
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-82 Score=640.23 Aligned_cols=391 Identities=41% Similarity=0.627 Sum_probs=364.7
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC----CCCcceeEEeeeceEEEEEcCCCcc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
.++++++++++++|+|||+.+++.|+..+++.++|++.......++..... ..+...+..++|+|||++|+|||||
T Consensus 54 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P 133 (451)
T cd07146 54 EARREEFARLITLESGLCLKDTRYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHP 133 (451)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChH
Confidence 345567799999999999999999999999999999988876655433221 1344567899999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
++..++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.+..|+.|++++.|+||||+.+|+
T Consensus 134 ~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~ 213 (451)
T cd07146 134 LNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGK 213 (451)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999999999999999999987777899999999999999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
.|.+.++ .+++++|+||+||+||++|+|++.+++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|
T Consensus 214 ~i~~~a~--~~~~~lElGG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g 291 (451)
T cd07146 214 AIAATAG--YKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVG 291 (451)
T ss_pred HHHHHhc--CCceeeecCCCceEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCC
Confidence 9998775 67999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+|.++++++||++++.+++++.+++++++++|+++++||.. .++|++|||+.++++++++++||+||||++|++|+|
T Consensus 292 ~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 368 (451)
T cd07146 292 DPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQR---QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKD 368 (451)
T ss_pred CCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCc---CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCC
Confidence 99999999999999999999999999999999999999864 378999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCC-CCCChHHHHHhhheeeE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGL-GREGSKYGMDEFLEIKY 401 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~-g~~~g~~~l~~~~~~k~ 401 (410)
+|||++++|+++|||+++|||+|.++++++++++++|+|+||+.+.. .+.+||||+|.||+ |+++|++|+++||+.|+
T Consensus 369 ~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~ 448 (451)
T cd07146 369 LDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKT 448 (451)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCcccChHHHHHHHhceeE
Confidence 99999999999999999999999999999999999999999987553 46799999999995 89999999999999998
Q ss_pred EE
Q 015249 402 VC 403 (410)
Q Consensus 402 v~ 403 (410)
++
T Consensus 449 ~~ 450 (451)
T cd07146 449 YS 450 (451)
T ss_pred Ee
Confidence 85
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-82 Score=649.89 Aligned_cols=393 Identities=30% Similarity=0.504 Sum_probs=365.4
Q ss_pred HHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhhh
Q 015249 10 QKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 89 (410)
Q Consensus 10 ~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~~ 89 (410)
++.++++++++|+|||+.+++.|+..+++.++||+.....+.........++...+++++|+|||++|+|||||+...++
T Consensus 111 ~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 190 (514)
T PRK03137 111 RKHEFSAWLVKEAGKPWAEADADTAEAIDFLEYYARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPFAIMAG 190 (514)
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEecCcEEEEECCCccHHHHHHH
Confidence 44567999999999999999999999999999999988776432211122456788999999999999999999999999
Q ss_pred hccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHHh
Q 015249 90 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 169 (410)
Q Consensus 90 ~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~ 169 (410)
++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.|++++.|.||||+.+|+.|.+.+
T Consensus 191 ~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~a 270 (514)
T PRK03137 191 MTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERA 270 (514)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999987778899999999999999999999999999998
Q ss_pred cc------ccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 170 AG------TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 170 ~~------~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
++ +++|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|
T Consensus 271 a~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g 350 (514)
T PRK03137 271 AKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVG 350 (514)
T ss_pred hcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCCC
Confidence 86 689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+|.++. ++||++++.+++++.+++++++++ +++++||......|+|++|||+.++++++++++||+||||++|++|+|
T Consensus 351 ~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~ 428 (514)
T PRK03137 351 NPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKD 428 (514)
T ss_pred CCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecCC
Confidence 999998 999999999999999999999987 699999875433579999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCccCCCCCCCC-CCChHHHHHhhheee
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGMDEFLEIK 400 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~--~~~~pfGg~~~SG~g-~~~g~~~l~~~~~~k 400 (410)
.+|||+++|+++|||++||||+|.+.++++++++++|+|+||+.+.. .+.+||||+|.||+| +.+|.+++++||+.|
T Consensus 429 ~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~~k 508 (514)
T PRK03137 429 FDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQAK 508 (514)
T ss_pred HHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhceEE
Confidence 99999999999999999999999999999999999999999987542 456899999999999 689999999999999
Q ss_pred EEEE
Q 015249 401 YVCL 404 (410)
Q Consensus 401 ~v~~ 404 (410)
+|..
T Consensus 509 ~v~~ 512 (514)
T PRK03137 509 TVSE 512 (514)
T ss_pred EEEE
Confidence 9864
|
|
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-82 Score=643.50 Aligned_cols=396 Identities=30% Similarity=0.437 Sum_probs=369.0
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.+++++++.|+|||+.+++.|+..+++.++|++.......++..+...++...+.+++|+|||++|+|||||+...
T Consensus 74 ~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~ 153 (477)
T TIGR01722 74 KEHRDEIAELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIP 153 (477)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHH
Confidence 34456779999999999999999999999999999998887766654432223455678999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|+ .+.+..|+.||+|+.|+||||+.+|+.|.+
T Consensus 154 ~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g~-~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~ 232 (477)
T TIGR01722 154 LWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHGD-KEAVDRLLEHPDVKAVSFVGSTPIGRYIHT 232 (477)
T ss_pred HHHHHHHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeCC-HHHHHHHHcCCCcCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999984 567889999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++.+.||+++|+||+||+||++|+|++.+++.+++++|.|+||.|++++|||||+++ ++|+++|+++++++++|+|.+
T Consensus 233 ~a~~~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~ 311 (477)
T TIGR01722 233 TGSAHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDD 311 (477)
T ss_pred HHHhcCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCC
Confidence 9988999999999999999999999999999999999999999999999999999998 999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+++++||++++++++++.+++++++++|+++++||.... .+|+|++|||+.++++++.+++||+||||++|++|+|
T Consensus 312 ~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~ 391 (477)
T TIGR01722 312 PGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADT 391 (477)
T ss_pred CCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCC
Confidence 999999999999999999999999999999999997531 2479999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCC--CCChHHHHHhhheee
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG--REGSKYGMDEFLEIK 400 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g--~~~g~~~l~~~~~~k 400 (410)
++|||+++|+++|||+++|||+|.+.++++++++++|.|+||+.... .+.+||||+|.||+| +++|.+++++||+.|
T Consensus 392 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k 471 (477)
T TIGR01722 392 LEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGK 471 (477)
T ss_pred HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChHHHHHHhcCee
Confidence 99999999999999999999999999999999999999999986543 467899999999999 578999999999999
Q ss_pred EEEEe
Q 015249 401 YVCLG 405 (410)
Q Consensus 401 ~v~~~ 405 (410)
+|++.
T Consensus 472 ~i~~~ 476 (477)
T TIGR01722 472 TVTTR 476 (477)
T ss_pred EEEEe
Confidence 99875
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-82 Score=638.03 Aligned_cols=394 Identities=44% Similarity=0.709 Sum_probs=370.3
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
.+++.++++++++|+||++.+++.|+..+++.+++++....+..+...+...++..++.+++|+|||++|+|||||++..
T Consensus 36 ~~~~~ela~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~ 115 (431)
T cd07104 36 EERRDEIADWLIRESGSTRPKAAFEVGAAIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILA 115 (431)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHH
Confidence 34566789999999999999999999999999999999887665544333224667789999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHH-HHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLT-ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~-~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
++++++||++||+||+|||+.+|.+ +..+.+++.++|+|+|++|++++++.+.+..|+.|++++.|.||||+.+++.|.
T Consensus 116 ~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~ 195 (431)
T cd07104 116 MRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIG 195 (431)
T ss_pred HHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 9999999999999999999999987 568999999999999999999997777889999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.++++++++++|+||+||+||++|+|++.+++.+++++|.|+||.|+++++||||++++|+|+++|+++++.+++|+|.
T Consensus 196 ~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~ 275 (431)
T cd07104 196 ELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPR 275 (431)
T ss_pred HHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 326 (410)
++++++||++++.+++++.+++++++.+|+++++||.. +++|++|||+.++++++++++||+||||++|++|+|.||
T Consensus 276 ~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 352 (431)
T cd07104 276 DPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY---EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEE 352 (431)
T ss_pred CCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHH
Confidence 99999999999999999999999999999999999865 378999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 015249 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 327 ai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
||+++|++++||+++|||+|.+.+.++++++++|+|+||+++.. .+.+||||+|.||+|+++|++++++|++.|+|++
T Consensus 353 ai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~~ 431 (431)
T cd07104 353 AVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKASGGGRFGGPASLEEFTEWQWITV 431 (431)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCCcccccCCccchHHHHHHhhceeEEeC
Confidence 99999999999999999999999999999999999999998764 4789999999999999999999999999999864
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-82 Score=641.01 Aligned_cols=396 Identities=63% Similarity=1.007 Sum_probs=374.4
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~ 88 (410)
+++.++++++++|+||+..+++.|+..+++.++|++..+....+...+...++...+.+++|+|||++|+|||||++..+
T Consensus 56 ~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~ 135 (451)
T cd07103 56 ERAEDLARLLTLEQGKPLAEARGEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMIT 135 (451)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHH
Confidence 44566899999999999999999999999999999988877666544433346678899999999999999999999999
Q ss_pred hhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHH
Q 015249 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 168 (410)
Q Consensus 89 ~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~ 168 (410)
+++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.+..|+.|+++|.|.||||+.+|+.|.+.
T Consensus 136 ~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~ 215 (451)
T cd07103 136 RKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQ 215 (451)
T ss_pred HHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998767788899999999999999999999999999
Q ss_pred hccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCCC
Q 015249 169 AAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 248 (410)
Q Consensus 169 ~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~ 248 (410)
++++.+|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.++
T Consensus 216 aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~ 295 (451)
T cd07103 216 AADTVKRVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDE 295 (451)
T ss_pred HHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHHH
Q 015249 249 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 328 (410)
Q Consensus 249 ~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai 328 (410)
++++||++++.+++++.+++++++.+|+++++||.....+++|++|||+.++++++++++||+||||++|++|+|.+||+
T Consensus 296 ~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 375 (451)
T cd07103 296 GTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVI 375 (451)
T ss_pred CCCCCcCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHH
Confidence 99999999999999999999999999999999997653357899999999999999999999999999999999999999
Q ss_pred HHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 015249 329 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 329 ~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
+++|++++||+++|||+|.+.++++++++++|.|+||+++...+.+||||.|.||+|+++|++++++||+.|++.+
T Consensus 376 ~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~~ 451 (451)
T cd07103 376 ARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEEYLETKYVSL 451 (451)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhceeEEeC
Confidence 9999999999999999999999999999999999999998777889999999999999999999999999998853
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-82 Score=640.64 Aligned_cols=393 Identities=40% Similarity=0.607 Sum_probs=367.8
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-ccCC--CCCcceeEEeeeceEEEEEcCCCcchh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEI-IPAT--LPDRRLFVLKQPVGVAGAITPWNFPLA 85 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~p~~ 85 (410)
+++.++++++++++||++.+++.|+..+++.++|++....++.+.. .+.. .++...+++++|+|||++|+|||||++
T Consensus 55 ~~~~~la~~~~~e~Gk~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~ 134 (453)
T cd07099 55 DHADELAELLHAETGKPRADAGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLL 134 (453)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHH
Confidence 4566779999999999999999999999999999999887765432 2211 245677899999999999999999999
Q ss_pred hhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHH
Q 015249 86 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 165 (410)
Q Consensus 86 ~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i 165 (410)
..++++++||++||+||+|||+.+|.++..++++|.++|+|+|++++++|++ +.+..|+.| .+|.|.||||+++|+.|
T Consensus 135 ~~~~~l~~ALaaGN~vilKps~~~p~~~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~ftGs~~~g~~i 212 (453)
T cd07099 135 TPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAFTGSVATGRKV 212 (453)
T ss_pred HHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEEECCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999865 678888887 59999999999999999
Q ss_pred HHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 166 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 166 ~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
.+.++++.+|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 213 ~~~aa~~~~~~~lelgG~~p~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~ 292 (453)
T cd07099 213 MAAAAERLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGAD 292 (453)
T ss_pred HHHHHhcCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
.++++++||++++.+++++.+++++++++|+++++||.....+++|++|||+.++++++++++||+||||++|++|+|.|
T Consensus 293 ~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~ 372 (453)
T cd07099 293 DIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADED 372 (453)
T ss_pred CCCCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHH
Confidence 99999999999999999999999999999999999997642357899999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
|||+++|+++|||+++|||+|.+.++++++++++|.|+||+.+. ..+.+||||+|.||+|+++|++++++||+.|+++
T Consensus 373 eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 373 EAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452 (453)
T ss_pred HHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence 99999999999999999999999999999999999999998765 3578999999999999999999999999999986
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-83 Score=651.28 Aligned_cols=393 Identities=45% Similarity=0.722 Sum_probs=368.6
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~ 88 (410)
+++.++++++++|+||++.+++.|+..+++.++|++.+.+++.++..+. ..+...++.++|+|||++|+|||||++.++
T Consensus 66 ~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 144 (462)
T PF00171_consen 66 ERRDELAELIALETGKPIAEARGEVDRAIDFLRYYADAARKLAGEVLPS-DPGSRNYTRREPLGVVLIITPWNFPLYLAV 144 (462)
T ss_dssp HTHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHHTEEEEEE-STTEEEEEEEEE-SEEEEEE-SSSCTHHHH
T ss_pred hcccccccccccccccccccccchhhhhhhhhhhhhhcccceehhhccc-ccccccccccccccceeecccccccccccc
Confidence 4567779999999999999999999999999999999998877655444 367889999999999999999999999999
Q ss_pred hhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHH
Q 015249 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 168 (410)
Q Consensus 89 ~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~ 168 (410)
+++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.||+++.|.||||+++++.|.+.
T Consensus 145 ~~~~~ALaaGN~VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 224 (462)
T PF00171_consen 145 WKIAPALAAGNTVVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKA 224 (462)
T ss_dssp HHHHHHHHTT-EEEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHH
T ss_pred cchhhhhcccccceeeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred hccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCCC
Q 015249 169 AAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 248 (410)
Q Consensus 169 ~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~ 248 (410)
++++++|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.++
T Consensus 225 a~~~~~~v~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~ 304 (462)
T PF00171_consen 225 AAKNLKPVVLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDE 304 (462)
T ss_dssp HHTTTSEEEEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTST
T ss_pred cccccccccccccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCc---ccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 249 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR---RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 249 ~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~---~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
++++||+++..+++++.+++++++.+|+++++||. .....|+|++|||+.+++++|++++||+||||++|++|+|.+
T Consensus 305 ~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 384 (462)
T PF00171_consen 305 STDVGPLISKAQRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLD 384 (462)
T ss_dssp TCSBCHCSSHHHHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHH
T ss_pred cccccccccchhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccch
Confidence 99999999999999999999999999999999992 222568999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCC-CCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~-~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
|+++++|+++|||+++|||+|.+.++++++++++|+|+||+++..... +||||+|.||+|+++|.+|+++||+.|+|
T Consensus 385 eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 385 EAIALANDSEYGLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGREGGPEGLDEFTQIKTV 462 (462)
T ss_dssp HHHHHHHHSSEESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred hhhhcccccCCCceeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCCcchHHHHHHHhCCccCC
Confidence 999999999999999999999999999999999999999999875444 69999999999999999999999999986
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-82 Score=635.71 Aligned_cols=392 Identities=32% Similarity=0.473 Sum_probs=362.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
.+++.++++++++|+|||+.+++.|+..+++.++|++.......+..... .++...++.++|+|||++|+|||||++.+
T Consensus 36 ~~~~~~la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 114 (431)
T cd07095 36 KANKEELARLISRETGKPLWEAQTEVAAMAGKIDISIKAYHERTGERATP-MAQGRAVLRHRPHGVMAVFGPFNFPGHLP 114 (431)
T ss_pred HhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccC-CCCceEEEEEecceEEEEECCCchHHHHH
Confidence 34566779999999999999999999999999999998877665543322 23567889999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++|+ .+.+..|+.|++++.|.||||+.+|+.|.+
T Consensus 115 ~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~~~v~g~-~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 193 (431)
T cd07095 115 NGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQGG-RETGEALAAHEGIDGLLFTGSAATGLLLHR 193 (431)
T ss_pred HHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHheEEeCc-HHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999984 568899999999999999999999999999
Q ss_pred Hhccc-cceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecc-hHHHHHHHHHHHHhhcccCCC
Q 015249 168 GAAGT-VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 168 ~~~~~-~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~~f~~~L~~~~~~~~~g~~ 245 (410)
.++.+ .+++++|+||+||+||++|+|++.|++.+++++|.|+||.|+++++||||++ ++|+|+++|+++++++++|+|
T Consensus 194 ~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p 273 (431)
T cd07095 194 QFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAP 273 (431)
T ss_pred HhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCC
Confidence 87755 5899999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
.++++++||++++.+++++.+++++++++|+++++||...+.+++|++|||+ ++++++.+++||+||||++|++|+|.+
T Consensus 274 ~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~ 352 (431)
T cd07095 274 DAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFD 352 (431)
T ss_pred CCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHH
Confidence 9999999999999999999999999999999999998654346899999999 688899999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
||++++|+++|||+++|||+|.+.++++++++++|+|+||+.+. ..+.+||||+|.||+|+++|.++++ |++.|++.
T Consensus 353 eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~-~~~~~~~~ 430 (431)
T cd07095 353 EAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGASSTAPFGGVGLSGNHRPSAYYAAD-YCAYPVAS 430 (431)
T ss_pred HHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCCCChHHHHH-HHhhhhcc
Confidence 99999999999999999999999999999999999999998665 3467899999999999999999999 55555553
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-82 Score=642.24 Aligned_cols=390 Identities=39% Similarity=0.648 Sum_probs=365.7
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
.+++.++++++++|+||++.+++ .|+..+++.+++++...+.+..+.. ....+..++|+|||++|+|||||+..
T Consensus 72 ~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~p~N~P~~~ 146 (466)
T cd07138 72 EARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER-----RGNSLVVREPIGVCGLITPWNWPLNQ 146 (466)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc-----CceEEEEEeecceEEEECCCccHHHH
Confidence 34566789999999999999986 4999999999999988766543321 23467889999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
+++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|++++++.+.+..|+.|++++.|.||||+.+|+.|.
T Consensus 147 ~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 226 (466)
T cd07138 147 IVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVA 226 (466)
T ss_pred HHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987777899999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.++++++|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.
T Consensus 227 ~~aa~~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~ 306 (466)
T cd07138 227 EAAADTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPR 306 (466)
T ss_pred HHHhccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~---~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
++++++||++++.+++++.+++++++++|+++++||.... ..++|++|||+.++++++++++||+||||++|++|+|
T Consensus 307 ~~~~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~ 386 (466)
T cd07138 307 DPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDD 386 (466)
T ss_pred CCCCcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCC
Confidence 9999999999999999999999999999999999986432 2479999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
.|||++++|+++|||+++|||+|.+.+.++++++++|+|+||+.. ..+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 387 ~~eai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 387 EDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred HHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence 999999999999999999999999999999999999999999864 4678999999999999999999999999999875
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-82 Score=639.59 Aligned_cols=395 Identities=43% Similarity=0.665 Sum_probs=368.8
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
.+++.++++++++|+||+..++. .|+..+++.+++++..++.+.+...+....+...+.+++|+|||++|+|||||++.
T Consensus 55 ~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~ 134 (450)
T cd07092 55 EENAEELAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMM 134 (450)
T ss_pred HHhHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHH
Confidence 34566779999999999998765 59999999999999888766544322222345678899999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+.++|.+ |+|+|++|++++++.+.+..|+.|++++.|.||||+.+|+.|.
T Consensus 135 ~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~ 213 (450)
T cd07092 135 AAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVA 213 (450)
T ss_pred HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 999999999999999999999999999999999999 9999999999987677889999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.++++++|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.
T Consensus 214 ~~a~~~~~~~~lelgG~~p~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~ 293 (450)
T cd07092 214 RAAADTLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPD 293 (450)
T ss_pred HHHhhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 326 (410)
++++++||++++.+++++.++|+++. +|+++++||......|+|++|||+.++++++++++||+||||++|++|+|.||
T Consensus 294 ~~~~~~gpli~~~~~~~i~~~i~~a~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~de 372 (450)
T cd07092 294 DEDTEMGPLNSAAQRERVAGFVERAP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDE 372 (450)
T ss_pred CCCCccCcccCHHHHHHHHHHHHHHH-cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHH
Confidence 99999999999999999999999998 99999999976433579999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 015249 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 327 ai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
||+++|+++|||+++|||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++++++|++.|+|++
T Consensus 373 ai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~~ 450 (450)
T cd07092 373 AIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVMV 450 (450)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCCCChHHHHHHHheeeEEeC
Confidence 999999999999999999999999999999999999999988777889999999999999999999999999999863
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-82 Score=634.99 Aligned_cols=391 Identities=40% Similarity=0.637 Sum_probs=364.0
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~ 88 (410)
+++.++++++++|+|||+.+++.|+..+++.++|++...++..+...+....+...+.+++|+|||++|+|||||+...+
T Consensus 37 ~~~~~la~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~ 116 (432)
T cd07105 37 SRRDEFIEAMMEETGATAAWAGFNVDLAAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGT 116 (432)
T ss_pred hCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCceeEEEEecceEEEEECCcCcHHHHHH
Confidence 34566799999999999999999999999999999998876544433332245567889999999999999999999999
Q ss_pred hhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCc---hhHHhHHhcCCCccEEEEeCcHHHHHHH
Q 015249 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNA---PDIGDALLTSPQVRKITFTGSTAVGKKL 165 (410)
Q Consensus 89 ~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~---~~~~~~l~~~~~v~~v~ftGs~~~~~~i 165 (410)
+++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++++. .+.+..|+.||+++.|.||||+.+|+.|
T Consensus 117 ~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i 196 (432)
T cd07105 117 RAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRII 196 (432)
T ss_pred HHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCcEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999753 3578899999999999999999999999
Q ss_pred HHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 166 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 166 ~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
.+.++++++|+++|+||+||+||++|+|++.+++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|
T Consensus 197 ~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-- 274 (432)
T cd07105 197 AETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-- 274 (432)
T ss_pred HHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~-~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
++++||++++.+++++.+++++++++|+++++||.... .+++|++|||+.++++++++++||+||||++|++|+|.
T Consensus 275 ---~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~ 351 (432)
T cd07105 275 ---PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDE 351 (432)
T ss_pred ---CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCH
Confidence 67899999999999999999999999999999987653 35799999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
|||++++|+++|||+++|||+|.+.++++++++++|+|+||+++.. .+.+||||+|.||+|+++|++++++|++.|+|+
T Consensus 352 deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~ 431 (432)
T cd07105 352 EEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWIT 431 (432)
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccccccChHHHHHHhhceEEEe
Confidence 9999999999999999999999999999999999999999998764 578999999999999999999999999999986
Q ss_pred E
Q 015249 404 L 404 (410)
Q Consensus 404 ~ 404 (410)
+
T Consensus 432 ~ 432 (432)
T cd07105 432 I 432 (432)
T ss_pred C
Confidence 4
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-82 Score=641.84 Aligned_cols=394 Identities=29% Similarity=0.437 Sum_probs=362.0
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++++|+|||+.+++.|+..+++.+++++.......+..... .++...+++++|+|||++|+|||||+...
T Consensus 73 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 151 (487)
T PRK09457 73 EENKEELAEVIARETGKPLWEAATEVTAMINKIAISIQAYHERTGEKRSE-MADGAAVLRHRPHGVVAVFGPYNFPGHLP 151 (487)
T ss_pred HhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecc-CCCceeEEEEeccEEEEEECCCchHHHHH
Confidence 34556779999999999999999999999999999888776655443221 23456788999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++| +.+.+..|+.|++++.|.||||+.+|+.|.+
T Consensus 152 ~~~~~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~ 230 (487)
T PRK09457 152 NGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHR 230 (487)
T ss_pred HHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998 5678999999999999999999999999999
Q ss_pred Hhccc-cceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchH-HHHHHHHHHHHhhcccCCC
Q 015249 168 GAAGT-VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY-EKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 168 ~~~~~-~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~-~~f~~~L~~~~~~~~~g~~ 245 (410)
.++++ .+++++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++ |+|+++|+++++++++|+|
T Consensus 231 ~aa~~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p 310 (487)
T PRK09457 231 QFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRW 310 (487)
T ss_pred HHhhcCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCC
Confidence 87755 567899999999999999999999999999999999999999999999999998 9999999999999999999
Q ss_pred C-CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 246 F-GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 246 ~-~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
. ++.+++||++++.+++++.+++++++++|+++++||...+.+++|++|||+ ++++++++++||+||||++|++|+|.
T Consensus 311 ~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~ 389 (487)
T PRK09457 311 DAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDF 389 (487)
T ss_pred CcCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCH
Confidence 6 788999999999999999999999999999999988654345799999999 68999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
||||+++|+++|||+++|||+|.+.++++++++++|+|+||+... ..+.+||||+|.||+|+++|..+ .+||+.|+++
T Consensus 390 deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~-~~~~~~k~~~ 468 (487)
T PRK09457 390 DEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHRPSAYYA-ADYCAYPMAS 468 (487)
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCCCCchhH-hhheeeeEEE
Confidence 999999999999999999999999999999999999999998755 34679999999999999999555 5599999998
Q ss_pred Ee
Q 015249 404 LG 405 (410)
Q Consensus 404 ~~ 405 (410)
++
T Consensus 469 ~~ 470 (487)
T PRK09457 469 LE 470 (487)
T ss_pred Ee
Confidence 87
|
|
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-82 Score=638.89 Aligned_cols=390 Identities=38% Similarity=0.619 Sum_probs=363.8
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC----CCCcceeEEeeeceEEEEEcCCCcch
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFPL 84 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~n~p~ 84 (410)
+++.++++++++|+||++.+++.|+..++..+++++....+..++..... ..+...++.++|+|||++|+|||||+
T Consensus 58 ~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~ 137 (452)
T cd07147 58 ERFEELAETIVLEAGKPIKDARGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPL 137 (452)
T ss_pred HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHH
Confidence 44566799999999999999999999999999999988776654432211 13445678899999999999999999
Q ss_pred hhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHH
Q 015249 85 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 164 (410)
Q Consensus 85 ~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~ 164 (410)
...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++++ .+.+..|+.|++++.|.||||+.+|+.
T Consensus 138 ~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~ 216 (452)
T cd07147 138 NLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPKGAFSVLPCS-RDDADLLVTDERIKLLSFTGSPAVGWD 216 (452)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCcCcEEEEeCC-ccchhHHhcCCCCCEEEEECCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999985 567889999999999999999999999
Q ss_pred HHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCC
Q 015249 165 LMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244 (410)
Q Consensus 165 i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~ 244 (410)
|.+.++ .+|+++|+||+||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+
T Consensus 217 v~~~a~--~~~v~lelgG~~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~ 294 (452)
T cd07147 217 LKARAG--KKKVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGD 294 (452)
T ss_pred HHHHhC--cCceEeecCCCCcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCC
Confidence 999876 369999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 245 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 245 ~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
|.++++++||++++.+++++.+++++++++|+++++||... ++|++|||+.++++++++++||+||||++|++|+|+
T Consensus 295 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~---g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 371 (452)
T cd07147 295 PKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKRD---GALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDF 371 (452)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCcC---CEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCH
Confidence 99999999999999999999999999999999999998753 789999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
||||+++|+++|||+++|||+|.++++++++++++|+|+||+.+.. .+.+||||+|+||+|+++|++|+++||+.|+|+
T Consensus 372 deai~~~n~~~~gL~~~v~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~ 451 (452)
T cd07147 372 DEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLV 451 (452)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhcceeEEe
Confidence 9999999999999999999999999999999999999999987653 467999999999999999999999999999987
Q ss_pred E
Q 015249 404 L 404 (410)
Q Consensus 404 ~ 404 (410)
|
T Consensus 452 ~ 452 (452)
T cd07147 452 I 452 (452)
T ss_pred C
Confidence 5
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-81 Score=637.92 Aligned_cols=395 Identities=41% Similarity=0.645 Sum_probs=369.0
Q ss_pred HHHHHHHHHHHHHHhhchH-HHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGAS-SLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~-~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
.+++.++++++++|+||++ .+++.|+..+++.+++++.++..+.++..+.. .+...+..++|+|||++|+|||||+..
T Consensus 55 ~~~~~ela~~~~~e~Gk~~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~ 133 (457)
T cd07108 55 EARSEELARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLPFG-PDVLTYTVREPLGVVGAILPWNAPLML 133 (457)
T ss_pred HHhHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHhCCceeccC-CCeeEEEEeecceEEEEECCCchHHHH
Confidence 3456677999999999997 68999999999999999998877665544322 345567889999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++++++|++.+.+..|+.|++++.|.||||+.+|+.|.
T Consensus 134 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~ 212 (457)
T cd07108 134 AALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIY 212 (457)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence 9999999999999999999999999999999999987 999999999987777889999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHH-HHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA-KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~-~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
+.++++++|+++|+||+||+||++|+|++.|++.++++ +|.|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 213 ~~aa~~l~~~~lelgG~~~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p 292 (457)
T cd07108 213 RAAADRLIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDP 292 (457)
T ss_pred HHHhccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCC
Confidence 99999999999999999999999999999999999999 59999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHH-CCCeEeeCCcccC----CCCceecceEeccCCCCCcccccceecceeeeee
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 320 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~-~ga~~~~gg~~~~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~ 320 (410)
.++++++||++++.+++++.++++++++ +|+++++||.... .+++|++|||+.++++++++++||+||||++|++
T Consensus 293 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~ 372 (457)
T cd07108 293 LDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIP 372 (457)
T ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeec
Confidence 9999999999999999999999999998 9999999997642 3579999999999999999999999999999999
Q ss_pred cCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHH-HHhhhee
Q 015249 321 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYG-MDEFLEI 399 (410)
Q Consensus 321 ~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~-l~~~~~~ 399 (410)
|+|.+|||+++|+++|||+++|||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|.++ +++||+.
T Consensus 373 ~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~ 452 (457)
T cd07108 373 WKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQK 452 (457)
T ss_pred CCCHHHHHHHHhCCCcCceeEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCCCccchhHHHHhhce
Confidence 999999999999999999999999999999999999999999999987777789999999999999999977 7999999
Q ss_pred eEEEE
Q 015249 400 KYVCL 404 (410)
Q Consensus 400 k~v~~ 404 (410)
|+|++
T Consensus 453 k~i~~ 457 (457)
T cd07108 453 KTVNI 457 (457)
T ss_pred EEEeC
Confidence 99864
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-81 Score=634.39 Aligned_cols=391 Identities=30% Similarity=0.450 Sum_probs=361.2
Q ss_pred HHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCcc---ccCCCCCcceeEEeeeceEEEEEcCCCcch
Q 015249 9 KQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEI---IPATLPDRRLFVLKQPVGVAGAITPWNFPL 84 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~ 84 (410)
++++++++++.+|+||++.+++ .|+..+++.++|++.....+.+.. .+....+...++.++|+|||++|+|||||+
T Consensus 43 ~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~ 122 (484)
T PLN02203 43 DNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPI 122 (484)
T ss_pred HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchH
Confidence 4456779999999999999996 699999999999998877765431 121123456789999999999999999999
Q ss_pred hhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHH
Q 015249 85 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 164 (410)
Q Consensus 85 ~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~ 164 (410)
...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+++| +.+.+..|+.|+ ++.|+||||+.+|+.
T Consensus 123 ~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~-lP~gvv~vv~g-~~~~~~~l~~~~-vd~v~fTGS~~~G~~ 199 (484)
T PLN02203 123 GLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKY-LDSKAVKVIEG-GPAVGEQLLQHK-WDKIFFTGSPRVGRI 199 (484)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCEEEEEeC-CHHHHHHHHhCC-CCEEEEECCHHHHHH
Confidence 999999999999999999999999999999999999986 99999999998 678899999995 999999999999999
Q ss_pred HHHHhccccceeeeeccCCCcEEecc---CCCHHHHHHHHHHHHHh-ccCCccccCCeEEEecchHHHHHHHHHHHHhhc
Q 015249 165 LMAGAAGTVKKVSLELGGNAPCIVFD---DADLNVAVNGALAAKFR-NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL 240 (410)
Q Consensus 165 i~~~~~~~~~~~~~e~gg~~~~iV~~---~adl~~a~~~i~~~~~~-~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~ 240 (410)
|.+.++++++|+++|+||+||+||++ |+|++.+++.+++++|. |+||.|++++|+|||++++|+|+++|.++++++
T Consensus 200 v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~ 279 (484)
T PLN02203 200 IMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKF 279 (484)
T ss_pred HHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999997 69999999999999996 899999999999999999999999999999999
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeee
Q 015249 241 KVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 320 (410)
Q Consensus 241 ~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~ 320 (410)
++|+|.++ +++||++++.+++++.++|++++.. +++++||..+ .+++|++|||+.+++++|++++||+||||++|++
T Consensus 280 ~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~~~~gg~~~-~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~ 356 (484)
T PLN02203 280 FGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-ASIVHGGSID-EKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIIT 356 (484)
T ss_pred cCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-CeEEeCCCcC-CCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEe
Confidence 99999886 6899999999999999999999886 7899988653 3589999999999999999999999999999999
Q ss_pred cCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhhe
Q 015249 321 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLE 398 (410)
Q Consensus 321 ~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pfGg~~~SG~g~~~g~~~l~~~~~ 398 (410)
|+|++|||+++|+++|||++||||+|.+.+.++++++++|.|+||+... ..+.+||||+|.||+|+++|.+++++||+
T Consensus 357 ~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~ 436 (484)
T PLN02203 357 VKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSH 436 (484)
T ss_pred eCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999998754 34679999999999999999999999999
Q ss_pred eeEEEEe
Q 015249 399 IKYVCLG 405 (410)
Q Consensus 399 ~k~v~~~ 405 (410)
.|+|+++
T Consensus 437 ~k~v~~~ 443 (484)
T PLN02203 437 EKAVLRR 443 (484)
T ss_pred eeEEEEc
Confidence 9999876
|
|
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-81 Score=637.00 Aligned_cols=382 Identities=41% Similarity=0.645 Sum_probs=359.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLR-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
.++++++++++++|+|||+.+++. |+..+++.+++++.+.+...+ .+..++|+|||++|+|||||+..
T Consensus 95 ~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~-----------~~~~~~P~GVV~~I~PwN~P~~~ 163 (480)
T cd07111 95 QKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT-----------ELAGWKPVGVVGQIVPWNFPLLM 163 (480)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----------CcccceecceEEEECCCccHHHH
Confidence 344566789999999999999985 999999999998887754321 23468999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++ +.+..|+.|++++.|+||||+.+|+.|.
T Consensus 164 ~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~~~g~~v~ 242 (480)
T cd07111 164 LAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVGRALR 242 (480)
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999854 6788999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.++++++|+++|+||+||+||++|+|++.+++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.
T Consensus 243 ~~aa~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~ 322 (480)
T cd07111 243 RATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPL 322 (480)
T ss_pred HHHhccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 326 (410)
++++++||++++.+++++.+++++++.+|+++++||...+.+++|++|||+.++++++++++||+||||++|++|+|.||
T Consensus 323 ~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~de 402 (480)
T cd07111 323 DKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKE 402 (480)
T ss_pred CCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHH
Confidence 99999999999999999999999999999999999864323579999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 015249 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 401 (410)
Q Consensus 327 ai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~ 401 (410)
||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.....+.+||||+|.||+|+++|.+|+++||+.|+
T Consensus 403 ai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 403 AVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYLRPSW 477 (480)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCCccchHHHHHHHhhccC
Confidence 999999999999999999999999999999999999999987777789999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-81 Score=629.22 Aligned_cols=388 Identities=31% Similarity=0.501 Sum_probs=358.0
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCc-cccCC--CCCcceeEEeeeceEEEEEcCCCcc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGE-IIPAT--LPDRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
+++++++++++++|+||++.+++ .|+..+++.++|++...+.+.+. ..... ..+...++.++|+|||++|+|||||
T Consensus 34 ~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P 113 (449)
T cd07136 34 KKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYP 113 (449)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCccccCCceeEEEEecCeEEEEECCCchH
Confidence 34456779999999999999997 59999999999999988776543 22211 1245678899999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
++..++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+++| +.+.+..|+.|+ ++.|.||||+++|+
T Consensus 114 ~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv~~~v~g-~~~~~~~L~~~~-v~~V~fTGS~~~g~ 190 (449)
T cd07136 114 FQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEYVAVVEG-GVEENQELLDQK-FDYIFFTGSVRVGK 190 (449)
T ss_pred HHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCEEEEEeC-ChHHHHHHhcCC-CCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 99999999998 456788888775 99999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
.|++.++++++|+++|+||+||+||++|+|+|.+++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 191 ~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g 270 (449)
T cd07136 191 IVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGE 270 (449)
T ss_pred HHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcccCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+|.+ .+++||++++.+++++.+++++ +++++||..+ .+++|++|||+.++++++.+++||+||||++|++|+|
T Consensus 271 ~p~~-~~~~gpli~~~~~~~i~~~i~~-----a~~~~gG~~~-~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~ 343 (449)
T cd07136 271 DPLE-SPDYGRIINEKHFDRLAGLLDN-----GKIVFGGNTD-RETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDT 343 (449)
T ss_pred CCCC-CCCccCcCCHHHHHHHHHHHhc-----ceEEECCCcC-CCCCEEeeEEEecCCCcChHHhccccCCeeEEEEeCC
Confidence 9987 8999999999999999999886 4899999764 3579999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 401 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~ 401 (410)
+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+... ..+.+||||+|.||+|+++|.+++++||+.|+
T Consensus 344 ~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~ 423 (449)
T cd07136 344 LDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKS 423 (449)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCCCccCcCcccCCcccCHHHHHHhccceE
Confidence 9999999999999999999999999999999999999999998764 34789999999999999999999999999999
Q ss_pred EEEe
Q 015249 402 VCLG 405 (410)
Q Consensus 402 v~~~ 405 (410)
|+++
T Consensus 424 v~~~ 427 (449)
T cd07136 424 ILKK 427 (449)
T ss_pred EEEc
Confidence 9876
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-81 Score=637.16 Aligned_cols=391 Identities=31% Similarity=0.520 Sum_probs=361.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCc--cccC-----CCCCcceeEEeeeceEEEEEcCC
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGE--IIPA-----TLPDRRLFVLKQPVGVAGAITPW 80 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~P~Gvv~~i~p~ 80 (410)
.+++.++++++.+|+||++.+++.|+..+++.++|++..+.+...+ .... ...+...+.+++|+|||++|+||
T Consensus 89 ~~~~~el~~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~ 168 (496)
T PLN00412 89 KEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPF 168 (496)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCC
Confidence 3455677999999999999999999999999999999877665432 1111 01123456889999999999999
Q ss_pred CcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHH
Q 015249 81 NFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTA 160 (410)
Q Consensus 81 n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~ 160 (410)
|||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+.+..|..|++++.|.|||| .
T Consensus 169 N~P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~ 247 (496)
T PLN00412 169 NYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-D 247 (496)
T ss_pred CchHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-H
Confidence 999999999999999999999999999999999999999999999999999999876778999999999999999999 9
Q ss_pred HHHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhc
Q 015249 161 VGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL 240 (410)
Q Consensus 161 ~~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~ 240 (410)
+|+.|.+.++ .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++
T Consensus 248 ~g~~v~~~a~--~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~ 325 (496)
T PLN00412 248 TGIAISKKAG--MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKL 325 (496)
T ss_pred HHHHHHHHhC--CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhC
Confidence 9999998874 78999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeee
Q 015249 241 KVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 320 (410)
Q Consensus 241 ~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~ 320 (410)
++|+|.+ ++++||++++.+++++.+++++++.+|++++++|.. .|+|++|||+.++++++++++||+||||++|++
T Consensus 326 ~~g~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~ 401 (496)
T PLN00412 326 TVGPPED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIR 401 (496)
T ss_pred ccCCCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEE
Confidence 9999987 789999999999999999999999999999997753 479999999999999999999999999999999
Q ss_pred cCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhhee
Q 015249 321 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEI 399 (410)
Q Consensus 321 ~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~ 399 (410)
|+|.||||+++|+++|||+++|||+|.+++.++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.
T Consensus 402 ~~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~ 481 (496)
T PLN00412 402 INSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKV 481 (496)
T ss_pred eCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCCCChHHHHHHhcce
Confidence 9999999999999999999999999999999999999999999999864 345799999999999999999999999999
Q ss_pred eEEEEe
Q 015249 400 KYVCLG 405 (410)
Q Consensus 400 k~v~~~ 405 (410)
|+++++
T Consensus 482 k~i~~~ 487 (496)
T PLN00412 482 KSTVIN 487 (496)
T ss_pred EEEEEe
Confidence 999875
|
|
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-81 Score=628.00 Aligned_cols=391 Identities=30% Similarity=0.453 Sum_probs=358.7
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCcc---ccCCCCCcceeEEeeeceEEEEEcCCCcc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEI---IPATLPDRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
+++++++++++.+|+||++.++. .|+..+++.++|++.......... .+........++.++|+|||++|+|||||
T Consensus 35 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P 114 (432)
T cd07137 35 DENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFP 114 (432)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCCcccCCceeEEEEecCcEEEEEcCCchH
Confidence 34456679999999999999987 599999999999998876644321 11111234567899999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+++| +.+.+..|+.| .++.|.||||+.+|+
T Consensus 115 ~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gvv~~v~g-~~~~~~~L~~~-~i~~v~fTGs~~~g~ 191 (432)
T cd07137 115 FLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKAIKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGR 191 (432)
T ss_pred HHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEEEEeC-CHHHHHHHHhC-CCCEEEEECChHHHH
Confidence 9999999999999999999999999999999999999995 99999999998 56678889887 599999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHH-hccCCccccCCeEEEecchHHHHHHHHHHHHhhccc
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKF-RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 242 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~-~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~ 242 (410)
.|.+.++++++|+++|+||+||+||++|+|++.|++.+++++| .|+||.|++++|+|||++++|+|+++|.++++++++
T Consensus 192 ~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 271 (432)
T cd07137 192 IIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFG 271 (432)
T ss_pred HHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhccCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999 599999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 243 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 243 g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
|+| ++++++||++++.+++++.+++++++. |+++++||... .+++|++|||+.+++++|++++||+||||++|++|+
T Consensus 272 g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 348 (432)
T cd07137 272 ENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGERD-EKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVK 348 (432)
T ss_pred CCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCcC-CCCCEEeeEEEecCCCcchhhhcccccCceEEEEeC
Confidence 999 468999999999999999999999998 89999998653 358999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheee
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k 400 (410)
|+||||+++|+++|||+++|||+|.+.+.++++++++|.|+||+... ..+.+||||+|.||+|+++|.+++++|++.|
T Consensus 349 ~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k 428 (432)
T cd07137 349 KIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKK 428 (432)
T ss_pred CHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCccccccCCCCCCCCcCcCcCCccccHHHHHHhccCc
Confidence 99999999999999999999999999999999999999999998765 3478999999999999999999999999999
Q ss_pred EEEE
Q 015249 401 YVCL 404 (410)
Q Consensus 401 ~v~~ 404 (410)
+|++
T Consensus 429 ~v~~ 432 (432)
T cd07137 429 AVLY 432 (432)
T ss_pred eeeC
Confidence 9863
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-80 Score=631.91 Aligned_cols=396 Identities=33% Similarity=0.516 Sum_probs=363.6
Q ss_pred HHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCc-cccCC--CCCcceeEEeeeceEEEEEcCCCcch
Q 015249 9 KQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGE-IIPAT--LPDRRLFVLKQPVGVAGAITPWNFPL 84 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~p~ 84 (410)
++++++++++++|+||++.+++ .|+..+++.++|++...+..... ..+.. ..+...++.++|+|||++|+|||||+
T Consensus 55 ~~~~ela~~~~~e~Gk~~~~a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~ 134 (465)
T cd07098 55 ENQEEICRVACRDTGKTMVDASLGEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPF 134 (465)
T ss_pred HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHH
Confidence 4556679999999999999986 59999999999999877654322 21211 12345678899999999999999999
Q ss_pred hhhhhhccchhccCCeEEEecCCCcHHHHHHHHH----HHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHH
Q 015249 85 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAE----LALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTA 160 (410)
Q Consensus 85 ~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~----~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~ 160 (410)
..++.++++||++||+||+|||+.+|+++..+.+ +|.++|+|+|++|+++|++ +.+..|+.|++|+.|.||||+.
T Consensus 135 ~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~V~ftGs~~ 213 (465)
T cd07098 135 HNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAEALTSHPVIDHITFIGSPP 213 (465)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHHHHhcCCCCCEEEEECCHH
Confidence 9999999999999999999999999999987555 4578999999999999964 7899999999999999999999
Q ss_pred HHHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhc
Q 015249 161 VGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL 240 (410)
Q Consensus 161 ~~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~ 240 (410)
+|+.|.+.++++.+|+++|+||+||+||++|+|++.+++.+++++|.++||.|+++++||||++++|+|+++|+++++.+
T Consensus 214 ~g~~v~~~a~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l 293 (465)
T cd07098 214 VGKKVMAAAAESLTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQAL 293 (465)
T ss_pred HHHHHHHHHHhcCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceecceEeccCCCCCcccccceeccee
Q 015249 241 KVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVA 316 (410)
Q Consensus 241 ~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl 316 (410)
++|+|.++++++||++++.+++++.+++++++++|+++++||.... .+++|++|||+.++++++++++||+||||+
T Consensus 294 ~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 373 (465)
T cd07098 294 RQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVM 373 (465)
T ss_pred CCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeE
Confidence 9999999999999999999999999999999999999999986532 247999999999999999999999999999
Q ss_pred eeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCCCCCCCCCCChHHHHH
Q 015249 317 PLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMD 394 (410)
Q Consensus 317 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pfGg~~~SG~g~~~g~~~l~ 394 (410)
+|++|+|.+||++++|+++|||+++|||+|.+.+.++++++++|.|+||.... ..+.+||||+|.||+|+++|+++++
T Consensus 374 ~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~ 453 (465)
T cd07098 374 VVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLR 453 (465)
T ss_pred EEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHH
Confidence 99999999999999999999999999999999999999999999999998653 3578999999999999999999999
Q ss_pred hhheeeEEEEe
Q 015249 395 EFLEIKYVCLG 405 (410)
Q Consensus 395 ~~~~~k~v~~~ 405 (410)
+|++.|+|+++
T Consensus 454 ~~~~~k~~~~~ 464 (465)
T cd07098 454 GLCNPKSVTED 464 (465)
T ss_pred HhheeEEEEEe
Confidence 99999999875
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-81 Score=635.35 Aligned_cols=390 Identities=26% Similarity=0.335 Sum_probs=349.3
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhC--------ccccCCCCC-cceeEEeee-ceEEEEEc
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYG--------EIIPATLPD-RRLFVLKQP-VGVAGAIT 78 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~--------~~~~~~~~~-~~~~~~~~P-~Gvv~~i~ 78 (410)
+++++++++ ..|+|||+.+++.|+..+++.++||+++++.... +..+...++ ...++.++| +|||++|+
T Consensus 74 ~~~~~la~l-~~e~Gkp~~ea~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~ 152 (513)
T cd07128 74 ERKEDLYAL-SAATGATRRDSWIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHIN 152 (513)
T ss_pred HHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEEC
Confidence 334555665 8999999999999999999999999999877542 222211112 235678999 59999999
Q ss_pred CCCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHhHHhcCCCccEEEEeC
Q 015249 79 PWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTG 157 (410)
Q Consensus 79 p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~ag-lP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftG 157 (410)
|||||++..++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|+++|++.+.+..+ +.++.|.|||
T Consensus 153 pwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTG 229 (513)
T cd07128 153 AFNFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTG 229 (513)
T ss_pred CcccHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEEC
Confidence 9999999999999999999999999999999999999999999999 99999999998644333332 5789999999
Q ss_pred cHHHHHHHHHHh--ccccceeeeeccCCCcEEeccCCC-----HHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHH
Q 015249 158 STAVGKKLMAGA--AGTVKKVSLELGGNAPCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 230 (410)
Q Consensus 158 s~~~~~~i~~~~--~~~~~~~~~e~gg~~~~iV~~~ad-----l~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~ 230 (410)
|+++|+.|++.+ +++++|+++|+|||||+||++|+| ++.+++.+++++|.|+||.|++++|||||++++|+|+
T Consensus 230 S~~~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~ 309 (513)
T cd07128 230 SAATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVI 309 (513)
T ss_pred CHHHHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHH
Confidence 999999999985 478999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc-------CCCCceecceEeccCCC-
Q 015249 231 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH-------SLGMTFYEPTVLSNVKS- 302 (410)
Q Consensus 231 ~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~-------~~~~~~~~Ptv~~~~~~- 302 (410)
++|+++++++++|+|.++++++||++++.+++++.++|+++++. +++++||... ..+|+|++|||+.++++
T Consensus 310 ~~l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~ 388 (513)
T cd07128 310 EALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPD 388 (513)
T ss_pred HHHHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCc
Confidence 99999999999999999999999999999999999999999988 9999999652 12479999999998887
Q ss_pred -CCcccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcc--eeEEEECCCCC---------C
Q 015249 303 -EMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLI---------S 370 (410)
Q Consensus 303 -~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~--~g~v~iN~~~~---------~ 370 (410)
++++++||+||||++|++|+|.+|+++++|+++|||++||||+|.+.+++++++++ +|+||||+... .
T Consensus 389 ~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~ 468 (513)
T cd07128 389 AATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSP 468 (513)
T ss_pred ccchHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCC
Confidence 48999999999999999999999999999999999999999999999999999997 99999998642 2
Q ss_pred CCCCCccCCCCCCCCCC-ChHHHHHhhheeeEEE
Q 015249 371 TEVAPFGGVKQSGLGRE-GSKYGMDEFLEIKYVC 403 (410)
Q Consensus 371 ~~~~pfGg~~~SG~g~~-~g~~~l~~~~~~k~v~ 403 (410)
.+.+||||+|.||+|++ +|.+++++|++.|+|.
T Consensus 469 ~~~~pfGG~k~SG~G~~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 469 LPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred CCCCCCCCcccCCCCcccccHHHHHHhheeeeee
Confidence 46789999999999999 5799999999999763
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-80 Score=629.87 Aligned_cols=396 Identities=47% Similarity=0.730 Sum_probs=370.5
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLR-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
.+++.++++++.+|+||++.+++. |+..+++.+++++.......+...+. ..+...+++++|+|||++|+|||||+..
T Consensus 55 ~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~N~P~~~ 133 (455)
T cd07093 55 EARADELALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYPQ-DGGALNYVLRQPVGVAGLITPWNLPLML 133 (455)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhHHHhCCccccC-CCCceEEEEEEeeeEEEEECCCChHHHH
Confidence 345566799999999999988865 99999999999998876644333222 2366778899999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.+..|+.|++++.|.||||+.+|+.|.
T Consensus 134 ~~~~~~~AL~aGN~VIlkps~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~ 213 (455)
T cd07093 134 LTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIM 213 (455)
T ss_pred HHHHHHHHHhcCCEEEeECCCcCcHHHHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987777889999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.++++++|+++|+||+||+||++|+|++.+++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.
T Consensus 214 ~~aa~~~~~~~lelgG~~~~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~ 293 (455)
T cd07093 214 RAAAPNLKPVSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPL 293 (455)
T ss_pred HHHhhcccceEeecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
++++++||++++.+++++.+++++++.+|+++++||.... ..++|++|||+.++++++++++||+||||++|++|+
T Consensus 294 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 373 (455)
T cd07093 294 DPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFD 373 (455)
T ss_pred CCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeC
Confidence 9999999999999999999999999999999999997642 247899999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
|.+||++++|++++||+++|||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|.+|+++|++.|++
T Consensus 374 ~~~eai~~~n~~~~gls~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~ 453 (455)
T cd07093 374 DEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNV 453 (455)
T ss_pred CHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCCCchHHHHHHHhceeEE
Confidence 99999999999999999999999999999999999999999999887777899999999999999999999999999998
Q ss_pred EE
Q 015249 403 CL 404 (410)
Q Consensus 403 ~~ 404 (410)
++
T Consensus 454 ~~ 455 (455)
T cd07093 454 CI 455 (455)
T ss_pred eC
Confidence 64
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-80 Score=636.15 Aligned_cols=397 Identities=29% Similarity=0.392 Sum_probs=366.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++++|+||++.+++.|+..+++.+++++...++..+........+...+++++|+|||++|+|||||+...
T Consensus 105 ~~~~~~la~~~~~e~Gk~~~~a~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~ 184 (518)
T cd07125 105 EANRGELIALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIF 184 (518)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceeEEEEecccEEEEECCcchHHHHH
Confidence 34567789999999999999999999999999999999887765443211223566789999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.+..|+.|++++.|+||||+.+++.|.+
T Consensus 185 ~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~ 264 (518)
T cd07125 185 TGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINR 264 (518)
T ss_pred HHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999876668899999999999999999999999999
Q ss_pred Hhccc---cceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCC
Q 015249 168 GAAGT---VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244 (410)
Q Consensus 168 ~~~~~---~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~ 244 (410)
.++++ .+|+++|+||+||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+
T Consensus 265 ~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~ 344 (518)
T cd07125 265 ALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGD 344 (518)
T ss_pred HhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccC
Confidence 88855 789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecC--
Q 015249 245 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK-- 322 (410)
Q Consensus 245 ~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~-- 322 (410)
|.++++++||++++.+++++.++++++++ ++++++||.....+++|++|||+.++ ++++++||+||||++|++|+
T Consensus 345 p~~~~~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~ 421 (518)
T cd07125 345 PWDLSTDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAE 421 (518)
T ss_pred CCCCCCCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCC
Confidence 99999999999999999999999999987 57899988654225899999999887 89999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCccCCCCCCCCC-CChHHHHHhhhee
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGR-EGSKYGMDEFLEI 399 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~--~~~~pfGg~~~SG~g~-~~g~~~l~~~~~~ 399 (410)
|.+|||+++|+++|||++||||+|.+.++++++++++|+|+||+.+.. .+.+||||+|.||+|+ .+|.+++++||+.
T Consensus 422 ~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~ 501 (518)
T cd07125 422 DLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNE 501 (518)
T ss_pred CHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcce
Confidence 999999999999999999999999999999999999999999987653 4678999999999995 6889999999999
Q ss_pred eEEEEecc
Q 015249 400 KYVCLGDM 407 (410)
Q Consensus 400 k~v~~~~~ 407 (410)
|+|+++..
T Consensus 502 k~i~~~~~ 509 (518)
T cd07125 502 KTVSLNTT 509 (518)
T ss_pred EEEEEEcc
Confidence 99988643
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-81 Score=626.22 Aligned_cols=388 Identities=32% Similarity=0.501 Sum_probs=357.8
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCC----CCCcceeEEeeeceEEEEEcCCCc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNF 82 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~n~ 82 (410)
+++++++++++++|+|||+.+++ .|+..+++.++|++.....+........ ..+...++.++|+|||++|+||||
T Consensus 41 ~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~ 120 (436)
T cd07135 41 KDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNY 120 (436)
T ss_pred HHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcc
Confidence 34456779999999999999998 5999999999999998876543221111 124567889999999999999999
Q ss_pred chhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHH
Q 015249 83 PLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 162 (410)
Q Consensus 83 p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~ 162 (410)
|++..++++++||++||+||+|||+.+|.++..+.+++.+ |+|+|++|+++|++.+. ..|+.|+ ++.|.||||+.+|
T Consensus 121 P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~-~lP~g~v~vv~g~~~~~-~~l~~~~-vd~v~ftGs~~~g 197 (436)
T cd07135 121 PVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPK-YLDPDAFQVVQGGVPET-TALLEQK-FDKIFYTGSGRVG 197 (436)
T ss_pred hHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH-hCCcCEEEEEcCCchhH-HHHHhCC-CCEEEEECCcHHH
Confidence 9999999999999999999999999999999999999999 69999999999865554 4688999 9999999999999
Q ss_pred HHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhccc
Q 015249 163 KKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 242 (410)
Q Consensus 163 ~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~ 242 (410)
+.|.+.++++++|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++
T Consensus 198 ~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 277 (436)
T cd07135 198 RIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYP 277 (436)
T ss_pred HHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHHHHHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 243 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 243 g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
|+| ++++++||++++.+++++.++++++ |+++++||... .+++|++|||+.++++++++++||+||||++|++|+
T Consensus 278 g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~ 352 (436)
T cd07135 278 GGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIGGEMD-EATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVD 352 (436)
T ss_pred CCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEECCCcC-CCCCEEccEEEecCCCccHHHhccccCCceEEEecC
Confidence 999 8999999999999999999999986 88999999764 357999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheee
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k 400 (410)
|.||||+++|+++|||++||||+|.+.++++++++++|+|+||+.+. ..+.+||||+|.||+|+++|.+++++||+.|
T Consensus 353 ~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k 432 (436)
T cd07135 353 DLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHER 432 (436)
T ss_pred CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeEEECCccccccCCCCCcCCcCcccCCccccHhHHHHhcccc
Confidence 99999999999999999999999999999999999999999998764 3578999999999999999999999999999
Q ss_pred EEE
Q 015249 401 YVC 403 (410)
Q Consensus 401 ~v~ 403 (410)
+|.
T Consensus 433 ~i~ 435 (436)
T cd07135 433 TVV 435 (436)
T ss_pred ccc
Confidence 873
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-80 Score=630.66 Aligned_cols=395 Identities=31% Similarity=0.457 Sum_probs=361.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
.+++.++++++++|+||+..+++.|+..+++.++|++.......++.... .++...++.++|+|||++|+|||||++..
T Consensus 71 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 149 (484)
T TIGR03240 71 EERKEALARVIARETGKPLWETRTEVASMIGKVAISIKAYHERTGESENP-MPDGRAVLRHRPHGVVAVFGPYNFPGHLP 149 (484)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeEEEEecccEEEEECCCchHHHHH
Confidence 34556779999999999999999999999999999887776655543221 23445688899999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++| +.+.+..|+.||++|.|+||||+++|+.|++
T Consensus 150 ~~~i~~ALaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~ 228 (484)
T TIGR03240 150 NGHIVPALLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHR 228 (484)
T ss_pred HHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998 5678899999999999999999999999999
Q ss_pred Hhccc-cceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchH-HHHHHHHHHHHhhcccCCC
Q 015249 168 GAAGT-VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY-EKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 168 ~~~~~-~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~-~~f~~~L~~~~~~~~~g~~ 245 (410)
.++++ .+++++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++||||++++ |+|+++|.++++++++|+|
T Consensus 229 ~aa~~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~ 308 (484)
T TIGR03240 229 QFAGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAW 308 (484)
T ss_pred HhhhcCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCC
Confidence 87765 578999999999999999999999999999999999999999999999999985 9999999999999999997
Q ss_pred -CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 246 -FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 246 -~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
.++++++||++++.+++++.++++++++.|+++++||...+.+++|++|||+ ++++++++++||+||||++|++|+|+
T Consensus 309 ~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~ 387 (484)
T TIGR03240 309 DAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDF 387 (484)
T ss_pred CcCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCH
Confidence 5788999999999999999999999999999999988654345789999999 68899999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
+|||+++|+++|||+++|||+|.++++++++++++|+|+||+... ..+.+||||+|.||+|+++|..+++ |++.|+++
T Consensus 388 ~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~ 466 (484)
T TIGR03240 388 DEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYAAD-YCAYPVAS 466 (484)
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCCCCchHHHh-heeeeEEE
Confidence 999999999999999999999999999999999999999998755 4567999999999999999976666 99999999
Q ss_pred Eec
Q 015249 404 LGD 406 (410)
Q Consensus 404 ~~~ 406 (410)
++.
T Consensus 467 ~~~ 469 (484)
T TIGR03240 467 LEA 469 (484)
T ss_pred Eec
Confidence 873
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-80 Score=628.75 Aligned_cols=391 Identities=30% Similarity=0.477 Sum_probs=358.5
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCcc-cc--CCCCCcceeEEeeeceEEEEEcCCCcc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEI-IP--ATLPDRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
.+++.++++++.+|+||+..++. .|+..+++.++|++...+.+.... .. ........++.++|+|||++|+|||||
T Consensus 43 ~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~P 122 (493)
T PTZ00381 43 EENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYP 122 (493)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchH
Confidence 45566779999999999999987 499999999999988776653322 11 111234578899999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
++..++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++++++| +.+.+..|+.|+ +|.|.||||+.+|+
T Consensus 123 l~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~-lp~~~v~vv~g-~~~~~~~l~~~~-~d~i~FTGS~~vG~ 199 (493)
T PTZ00381 123 LNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY-LDPSYVRVIEG-GVEVTTELLKEP-FDHIFFTGSPRVGK 199 (493)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEEEecC-CHHHHHHHHhCC-CCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999996 99999999998 677888899887 99999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
.|++.++++++|+++|+||+||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|++.++++. |
T Consensus 200 ~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g 278 (493)
T PTZ00381 200 LVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-G 278 (493)
T ss_pred HHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-C
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999985 7
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
++.++++++||++++++++++.+++++ +|+++++||..+ .+++|++|||+.++++++++++||+||||++|++|+|
T Consensus 279 ~~~~~~~~~gpli~~~~~~ri~~~i~~---~ga~~~~gG~~~-~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 354 (493)
T PTZ00381 279 EDPKKSEDYSRIVNEFHTKRLAELIKD---HGGKVVYGGEVD-IENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYEN 354 (493)
T ss_pred CCCccCCCcCCCCCHHHHHHHHHHHHh---CCCcEEECCCcC-CCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCC
Confidence 777889999999999999999999974 699999999764 3578999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 401 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~ 401 (410)
.+|||+++|++++||++||||+|.+.++++++++++|.|+||+... ..+.+||||+|.||+|+++|.+|+++||+.|+
T Consensus 355 ~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~ 434 (493)
T PTZ00381 355 IDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKP 434 (493)
T ss_pred HHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCCCCCCcCcccccccchHHHHHhccceeE
Confidence 9999999999999999999999999999999999999999998764 45789999999999999999999999999999
Q ss_pred EEEec
Q 015249 402 VCLGD 406 (410)
Q Consensus 402 v~~~~ 406 (410)
|+++.
T Consensus 435 v~~~~ 439 (493)
T PTZ00381 435 VLNKS 439 (493)
T ss_pred EEEcc
Confidence 98764
|
|
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-80 Score=620.89 Aligned_cols=391 Identities=33% Similarity=0.437 Sum_probs=357.4
Q ss_pred HHHHHHHHHHHHHHhhch-HHHHH-HHHHHHHHHHHHHHHHHHHHhCccc---cCCCCCcceeEEeeeceEEEEEcCCCc
Q 015249 8 RKQKMLYLRLLMRLILGA-SSLLL-REVDYGAKFIEFYAEEAKRVYGEII---PATLPDRRLFVLKQPVGVAGAITPWNF 82 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~-~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~P~Gvv~~i~p~n~ 82 (410)
.+++.++++++.+|+||+ +.++. .|+..+++.++|++........... .....+...++.++|+|||++|+||||
T Consensus 34 ~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~ 113 (434)
T cd07133 34 LDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNY 113 (434)
T ss_pred HHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCCceEEEEecccEEEEEcCCch
Confidence 344556799999999985 56765 6999999999999988766544321 111124457889999999999999999
Q ss_pred chhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHH
Q 015249 83 PLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 162 (410)
Q Consensus 83 p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~ 162 (410)
|+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++++++| +.+.+..|+.|+ ++.|+||||+.+|
T Consensus 114 P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g~~~~v~g-~~~~~~~l~~~~-v~~V~ftGs~~~g 190 (434)
T cd07133 114 PLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDEVAVVTG-GADVAAAFSSLP-FDHLLFTGSTAVG 190 (434)
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEEEEeC-ChHHHHHHHhCC-CCEEEEeCchHHH
Confidence 99999999999999999999999999999999999999997 99999999998 456788888766 9999999999999
Q ss_pred HHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhccc
Q 015249 163 KKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 242 (410)
Q Consensus 163 ~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~ 242 (410)
+.|.+.++++++|+++|+||+||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++
T Consensus 191 ~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~ 270 (434)
T cd07133 191 RHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYP 270 (434)
T ss_pred HHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhccCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceecceEeccCCCCCcccccceecceeeeee
Q 015249 243 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 320 (410)
Q Consensus 243 g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~--~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~ 320 (410)
|+ ++++++||++++.+++++.+++++++++|+++++||.... .+++|++|||+.++++++++++||+||||++|++
T Consensus 271 g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~ 348 (434)
T cd07133 271 TL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILT 348 (434)
T ss_pred CC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEE
Confidence 86 4678899999999999999999999999999999986542 3579999999999999999999999999999999
Q ss_pred cCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhhe
Q 015249 321 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLE 398 (410)
Q Consensus 321 ~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pfGg~~~SG~g~~~g~~~l~~~~~ 398 (410)
|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+
T Consensus 349 ~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~ 428 (434)
T cd07133 349 YDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSH 428 (434)
T ss_pred eCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCcCCCCcccCCCcCCHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999998764 35789999999999999999999999999
Q ss_pred eeEEE
Q 015249 399 IKYVC 403 (410)
Q Consensus 399 ~k~v~ 403 (410)
.|+|+
T Consensus 429 ~k~v~ 433 (434)
T cd07133 429 AKPVF 433 (434)
T ss_pred cceec
Confidence 99874
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-80 Score=646.58 Aligned_cols=389 Identities=24% Similarity=0.325 Sum_probs=350.5
Q ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHh--------CccccCCCCC-cceeEEeeec-eEEEEEcCC
Q 015249 11 KMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVY--------GEIIPATLPD-RRLFVLKQPV-GVAGAITPW 80 (410)
Q Consensus 11 ~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~P~-Gvv~~i~p~ 80 (410)
++++++ +++|+|||+.+++.|+..+++.++||+..+++.. ++..+...++ ...++.++|+ |||++|+||
T Consensus 76 ~~ela~-~~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pw 154 (663)
T TIGR02278 76 KEALYA-LAATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAF 154 (663)
T ss_pred HHHHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCC
Confidence 445566 5899999999999999999999999999887632 2322221122 3468899998 999999999
Q ss_pred CcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcH
Q 015249 81 NFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGST 159 (410)
Q Consensus 81 n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~ag-lP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~ 159 (410)
|||++..++++++||++||+||+|||+.+|.++..+.+++.++| +|+|++|+++|+.. ..+..+++++.|+||||+
T Consensus 155 N~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~~---~~~~~~~~~~~V~FTGS~ 231 (663)
T TIGR02278 155 NFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSAG---DLLDHLDHRDVVAFTGSA 231 (663)
T ss_pred chHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCChH---HHHhcCCCCCEEEEECCH
Confidence 99999999999999999999999999999999999999999999 99999999998522 233334778999999999
Q ss_pred HHHHHHHHHh--ccccceeeeeccCCCcEEeccCCC-----HHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHH
Q 015249 160 AVGKKLMAGA--AGTVKKVSLELGGNAPCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 232 (410)
Q Consensus 160 ~~~~~i~~~~--~~~~~~~~~e~gg~~~~iV~~~ad-----l~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~ 232 (410)
++|+.|++.+ +++++|+++|+|||||+||++||| ++.+++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus 232 ~~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~ 311 (663)
T TIGR02278 232 ATADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKA 311 (663)
T ss_pred HHHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHH
Confidence 9999999874 478999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCC-cccccce
Q 015249 233 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEM-LVSREEV 311 (410)
Q Consensus 233 L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~-~~~~eE~ 311 (410)
|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||... .+|+|++|||+.+++++| ++++||+
T Consensus 312 l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-~~g~~~~PTvl~~~~~~~~~i~~eE~ 390 (663)
T TIGR02278 312 LQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGR-LDGAFFPPTLLLAEDPWAGAVHATEA 390 (663)
T ss_pred HHHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC-CCCeeEccEEEeeCCcchhhHHhccc
Confidence 99999999999999999999999999999999999999999999999999764 357999999999888876 7999999
Q ss_pred ecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhc--ceeEEEE-CCCC--------CCCCCCCccCCC
Q 015249 312 FGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL--EYGLVGV-NEGL--------ISTEVAPFGGVK 380 (410)
Q Consensus 312 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~--~~g~v~i-N~~~--------~~~~~~pfGg~~ 380 (410)
||||++|++|+|.+||++++|+++|||++||||+|.+.++++++++ ++|+|+| |... ...+.+||||+|
T Consensus 391 FGPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k 470 (663)
T TIGR02278 391 FGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPG 470 (663)
T ss_pred cCCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999 7999999 7521 123578999999
Q ss_pred CCCCCCC-ChHHHHHhhheeeEEEE
Q 015249 381 QSGLGRE-GSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 381 ~SG~g~~-~g~~~l~~~~~~k~v~~ 404 (410)
.||+|++ +|.+++++|++.|+|..
T Consensus 471 ~SG~G~~~g~~~~l~~f~~~k~v~~ 495 (663)
T TIGR02278 471 RAGGGEELGGLRSVKHYMQRTAIQG 495 (663)
T ss_pred cCcCCCccchHHHHHHhceeEEEEc
Confidence 9999999 57899999999999864
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-80 Score=626.42 Aligned_cols=391 Identities=46% Similarity=0.730 Sum_probs=363.9
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC----CCCcceeEEeeeceEEEEEcCCCcch
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFPL 84 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~n~p~ 84 (410)
+++.++++++.+|+||+..+++.|+..+++.++|++.......++..+.. ..+...+.+++|+|||++|+|||||+
T Consensus 58 ~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~ 137 (453)
T cd07149 58 ERREEFARTIALEAGKPIKDARKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPL 137 (453)
T ss_pred HhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChH
Confidence 44566799999999999999999999999999999988766655433221 11334578899999999999999999
Q ss_pred hhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHH
Q 015249 85 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 164 (410)
Q Consensus 85 ~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~ 164 (410)
...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.+..|+.|++++.|.||||+.+++.
T Consensus 138 ~~~~~~~~~ALaaGN~VI~Kps~~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~ 217 (453)
T cd07149 138 NLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEA 217 (453)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999876677899999999999999999999999
Q ss_pred HHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCC
Q 015249 165 LMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244 (410)
Q Consensus 165 i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~ 244 (410)
|.+.++ .+++++|+||+||+||++|+|++.+++.+++++|.++||.|+++++||||++++|+|+++|+++++.+++|+
T Consensus 218 i~~~a~--~~~~~lelGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~ 295 (453)
T cd07149 218 IARKAG--LKKVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGD 295 (453)
T ss_pred HHHHcC--CCceeeecCCCceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCC
Confidence 998874 789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 245 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 245 ~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
|.++++++||++++.+++++.+++++++.+|+++++||... ++|++|||+.++++++++++||+||||++|++|+|+
T Consensus 296 p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~---g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 372 (453)
T cd07149 296 PLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRD---GAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTL 372 (453)
T ss_pred CCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCCC---CeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCH
Confidence 99999999999999999999999999999999999998653 689999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
+|||+++|+++|||+++|||+|.++++++++++++|+|+||+.+.. .+.+||||+|.||+|+++|++|+++|++.|+|.
T Consensus 373 ~eai~~~n~~~~gLt~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 373 DEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452 (453)
T ss_pred HHHHHHHhCCCcCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence 9999999999999999999999999999999999999999987653 467999999999999999999999999999986
Q ss_pred E
Q 015249 404 L 404 (410)
Q Consensus 404 ~ 404 (410)
+
T Consensus 453 ~ 453 (453)
T cd07149 453 F 453 (453)
T ss_pred C
Confidence 3
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-80 Score=619.86 Aligned_cols=391 Identities=31% Similarity=0.477 Sum_probs=362.3
Q ss_pred HHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCcc-c--cCCCCCcceeEEeeeceEEEEEcCCCcch
Q 015249 9 KQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEI-I--PATLPDRRLFVLKQPVGVAGAITPWNFPL 84 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~ 84 (410)
++++++++++.+|+||++.+++ .|+..+++.+++++.......... . +....+...+++++|+|||++|+|||||+
T Consensus 35 ~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~ 114 (433)
T cd07134 35 ARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPF 114 (433)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCCceEEEEecCCEEEEEcCCchHH
Confidence 3456679999999999999997 699999999999988765543321 1 11123556789999999999999999999
Q ss_pred hhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHH
Q 015249 85 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 164 (410)
Q Consensus 85 ~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~ 164 (410)
+.+++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+++++++ +.+.+..|++|+ ++.|.||||+.+|+.
T Consensus 115 ~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~v~~v~g-~~~~~~~l~~~~-v~~v~ftGs~~~g~~ 191 (433)
T cd07134 115 NLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVAVFEG-DAEVAQALLELP-FDHIFFTGSPAVGKI 191 (433)
T ss_pred HHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEEEEeC-ChhHHHHHHhCC-CCEEEEECChHHHHH
Confidence 999999999999999999999999999999999999999 99999999998 467888999998 999999999999999
Q ss_pred HHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCC
Q 015249 165 LMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244 (410)
Q Consensus 165 i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~ 244 (410)
|.+.++++.+|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++.+..|+
T Consensus 192 i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~ 271 (433)
T cd07134 192 VMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKD 271 (433)
T ss_pred HHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCcCCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999989999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred C-CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 245 G-FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 245 ~-~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
| .+.++++||++++.+++++.+++++++++|+++++||... .+++|++|||+.++++++++++||+||||++|++|+|
T Consensus 272 ~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 350 (433)
T cd07134 272 AARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFD-AAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYED 350 (433)
T ss_pred CCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcC-CCCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCC
Confidence 7 8889999999999999999999999999999999999764 3579999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 401 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~ 401 (410)
.+|+|+++|+++|||+++|||+|.+.++++++++++|.|+||+.+. ..+.+||||+|+||+|+++|.+++++||+.|+
T Consensus 351 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~ 430 (433)
T cd07134 351 LDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERA 430 (433)
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCcccCCCcCcHHHHHHhcccce
Confidence 9999999999999999999999999999999999999999998765 34789999999999999999999999999998
Q ss_pred EE
Q 015249 402 VC 403 (410)
Q Consensus 402 v~ 403 (410)
|+
T Consensus 431 i~ 432 (433)
T cd07134 431 VL 432 (433)
T ss_pred ee
Confidence 75
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-79 Score=624.78 Aligned_cols=393 Identities=38% Similarity=0.580 Sum_probs=368.1
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC----CCCcceeEEeeeceEEEEEcCCCcch
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFPL 84 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~n~p~ 84 (410)
+++.++++++++|+||+..++..|+..+++.++++++....+.+...+.. ..+...+.+++|+|||++|+|||||+
T Consensus 76 ~~~~el~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~ 155 (473)
T cd07082 76 ENKEEVANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPL 155 (473)
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHH
Confidence 34566799999999999999999999999999999998877655533211 13456788999999999999999999
Q ss_pred hhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHH
Q 015249 85 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 164 (410)
Q Consensus 85 ~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~ 164 (410)
...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.+..|+.|++++.|.||||+.+++.
T Consensus 156 ~~~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~ 235 (473)
T cd07082 156 NLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNR 235 (473)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999977778899999999999999999999999
Q ss_pred HHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCC
Q 015249 165 LMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244 (410)
Q Consensus 165 i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~ 244 (410)
|.+.++ .+|+++|+||+||+||++|+|++.+++.+++++|.++||.|+++++||||++++|+|+++|.++++++++|+
T Consensus 236 i~~~a~--~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~ 313 (473)
T cd07082 236 LKKQHP--MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGM 313 (473)
T ss_pred HHHHhC--CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCC
Confidence 998876 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 245 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 245 ~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
|.++++++||++++.+++++.+++++++.+|+++++||... .++|+.|||+.++++++++++||+||||++|++|+|.
T Consensus 314 ~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~ 391 (473)
T cd07082 314 PWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE--GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDI 391 (473)
T ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCH
Confidence 99999999999999999999999999999999999999764 3799999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
+|||+++|+++|||+++|||+|.+.+.++++++++|+|+||+++.. .+.+||||+|.||+|+++|.+|+++|++.|+|+
T Consensus 392 ~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~ 471 (473)
T cd07082 392 EEAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIV 471 (473)
T ss_pred HHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccCCCChHHHHHHhhceeEEE
Confidence 9999999999999999999999999999999999999999997753 356899999999999999999999999999987
Q ss_pred Ee
Q 015249 404 LG 405 (410)
Q Consensus 404 ~~ 405 (410)
++
T Consensus 472 ~~ 473 (473)
T cd07082 472 IN 473 (473)
T ss_pred EC
Confidence 63
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-79 Score=627.63 Aligned_cols=392 Identities=24% Similarity=0.327 Sum_probs=349.3
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCC--------CCcceeEEeee-ceEEEEEcC
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATL--------PDRRLFVLKQP-VGVAGAITP 79 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~P-~Gvv~~i~p 79 (410)
++++++++++++|+|||+.+++.|+.++++.++||+.++..+.+....... +....+..++| +|||++|+|
T Consensus 78 ~~~~ela~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~p 157 (521)
T PRK11903 78 ANRDAYYDIATANSGTTRNDSAVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINA 157 (521)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECC
Confidence 345667999999999999999999999999999999988765443211100 12234678899 699999999
Q ss_pred CCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCc
Q 015249 80 WNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGS 158 (410)
Q Consensus 80 ~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~ag-lP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs 158 (410)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++| +|+|++|+++|++.+.+..| ++++.|+||||
T Consensus 158 wN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS 234 (521)
T PRK11903 158 FNFPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGS 234 (521)
T ss_pred cchHHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECC
Confidence 999999999999999999999999999999999999999999999 99999999998665544433 78999999999
Q ss_pred HHHHHHHHHHh--ccccceeeeeccCCCcEEeccCCC-----HHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHH
Q 015249 159 TAVGKKLMAGA--AGTVKKVSLELGGNAPCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFAD 231 (410)
Q Consensus 159 ~~~~~~i~~~~--~~~~~~~~~e~gg~~~~iV~~~ad-----l~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~ 231 (410)
+.+|+.|++.+ +++++|+++|+|||||+||++|+| ++.+++.+++++|.|+||.|++++|||||++++|+|++
T Consensus 235 ~~~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~ 314 (521)
T PRK11903 235 AETAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAE 314 (521)
T ss_pred HHHHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHH
Confidence 99999999864 478899999999999999999999 59999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC------CCCceecceEeccCCC--C
Q 015249 232 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS------LGMTFYEPTVLSNVKS--E 303 (410)
Q Consensus 232 ~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~------~~~~~~~Ptv~~~~~~--~ 303 (410)
+|+++++++++|+|.++++++||++++.+++++.++|+.. .+|+++++||.... .+++|++|||+.++++ +
T Consensus 315 ~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~ 393 (521)
T PRK11903 315 ALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAA 393 (521)
T ss_pred HHHHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCcc
Confidence 9999999999999999999999999999999999999964 57999999996521 2478999999986554 4
Q ss_pred CcccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhc--ceeEEEECCCCC---------CCC
Q 015249 304 MLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL--EYGLVGVNEGLI---------STE 372 (410)
Q Consensus 304 ~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~--~~g~v~iN~~~~---------~~~ 372 (410)
+++++||+||||++|++|+|.+|+|+++|+++|||++||||+|.+.+.++++++ ++|+|+||+.+. ..+
T Consensus 394 ~~i~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~ 473 (521)
T PRK11903 394 TAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMP 473 (521)
T ss_pred chHHhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCC
Confidence 688999999999999999999999999999999999999999999999999999 899999997542 345
Q ss_pred CCCccCCCCCCCCCC-ChHHHHHhhheeeEEEE
Q 015249 373 VAPFGGVKQSGLGRE-GSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 373 ~~pfGg~~~SG~g~~-~g~~~l~~~~~~k~v~~ 404 (410)
.+||||+|.||+|++ +|.+++++||+.|+|..
T Consensus 474 ~~PfGG~k~SG~Gr~~g~~~~l~~~t~~~~~~~ 506 (521)
T PRK11903 474 QSLHGGPGRAGGGEELGGLRALAFYHRRSAVQA 506 (521)
T ss_pred CCCCCCCCcCcCCcccccHHHHHHHhccceeeC
Confidence 789999999999999 55899999999887653
|
|
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-78 Score=608.94 Aligned_cols=388 Identities=30% Similarity=0.462 Sum_probs=354.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccC---CCCCcceeEEeeeceEEEEEcCCCcc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPA---TLPDRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
++++.++++++.+|+||++.++. .|+..+++.+++++.....+....... ...+...++.++|+|||++|+|||||
T Consensus 34 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P 113 (443)
T cd07132 34 EENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYP 113 (443)
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccccCCCceEEEEecccEEEEEcCCchh
Confidence 34556679999999999999996 699999999999998877664432211 11234578899999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
++..++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|++++++. .+..++. +++|.|.||||+.+|+
T Consensus 114 ~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv~~vv~g~~~-~~~~l~~-~~vd~V~fTGs~~~g~ 190 (443)
T cd07132 114 LQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKECYPVVLGGVE-ETTELLK-QRFDYIFYTGSTSVGK 190 (443)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCeEEEEeCCHH-HHHHHHh-CCCCEEEEECChHHHH
Confidence 9999999999999999999999999999999999999986 99999999998544 4566775 5899999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
.|.+.++++++|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|.+++++++.|
T Consensus 191 ~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g 270 (443)
T cd07132 191 IVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGE 270 (443)
T ss_pred HHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+| ++.+++||++++++++++.+++++ +++++||..+ .+++|++|||+.++++++++++||+||||++|++|+|
T Consensus 271 ~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~ 343 (443)
T cd07132 271 DP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTD-EKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNN 343 (443)
T ss_pred CC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccC-CCCCEEeeEEEeCCCCCChHHhccccCceeEEEEeCC
Confidence 88 788999999999999999998873 5899998764 3578999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 401 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~--~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~ 401 (410)
++|||+++|+++|||+++|||+|.+.+.++++++++|.|+||++... .+.+||||+|.||+|+++|.+++++|++.|+
T Consensus 344 ~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~ 423 (443)
T cd07132 344 LDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRS 423 (443)
T ss_pred HHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCCCcccCCCcccHHHHHHhccccE
Confidence 99999999999999999999999999999999999999999987643 3679999999999999999999999999999
Q ss_pred EEEe
Q 015249 402 VCLG 405 (410)
Q Consensus 402 v~~~ 405 (410)
|+++
T Consensus 424 v~~~ 427 (443)
T cd07132 424 CLVK 427 (443)
T ss_pred EEEc
Confidence 9876
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-78 Score=653.39 Aligned_cols=395 Identities=29% Similarity=0.418 Sum_probs=365.9
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc-CCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIP-ATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
+++.+++.++++|+||++.++..|+..++++++||+..+....+.... ....++.++++++|+|||++|+|||||+...
T Consensus 622 ~~~~eL~~l~~~E~GK~~~~a~~EV~eaid~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~IsPwNfPlai~ 701 (1038)
T PRK11904 622 ANRAELIALCVREAGKTLQDAIAEVREAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCISPWNFPLAIF 701 (1038)
T ss_pred HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEECCCccHHHHH
Confidence 345677999999999999999999999999999999998877654222 2235778899999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|++.+.+..|+.||+++.|.||||+.+++.|.+
T Consensus 702 ~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~ 781 (1038)
T PRK11904 702 LGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINR 781 (1038)
T ss_pred HHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999998
Q ss_pred Hhccc---cceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCC
Q 015249 168 GAAGT---VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244 (410)
Q Consensus 168 ~~~~~---~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~ 244 (410)
.++++ .+|+++|+||+|++||++|||++.|++.+++|+|.++||.|+++++||||++++|+|+++|+++++++++|+
T Consensus 782 ~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGd 861 (1038)
T PRK11904 782 TLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGD 861 (1038)
T ss_pred HHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence 88765 679999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 245 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 245 ~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~--~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
|.++++++||++++.+++++.++|+++.+ |+++++||..++ ..|+|+.|||+.. +++.+++||+||||++|++|+
T Consensus 862 p~d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~~ 938 (1038)
T PRK11904 862 PRLLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRYK 938 (1038)
T ss_pred cccccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEeC
Confidence 99999999999999999999999999876 899999987643 2489999999963 567789999999999999998
Q ss_pred --CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCccCCCCCCCC-CCChHHHHHhhh
Q 015249 323 --TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGMDEFL 397 (410)
Q Consensus 323 --~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~--~~~~pfGg~~~SG~g-~~~g~~~l~~~~ 397 (410)
+++|+|+++|+++|||+++|||+|.+.++++++++++|+||||+.+.. ...+||||+|.||+| ..+|+++|++|+
T Consensus 939 ~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~ 1018 (1038)
T PRK11904 939 ASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFA 1018 (1038)
T ss_pred CCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHh
Confidence 689999999999999999999999999999999999999999997663 356799999999999 568999999999
Q ss_pred eeeEEEEec
Q 015249 398 EIKYVCLGD 406 (410)
Q Consensus 398 ~~k~v~~~~ 406 (410)
+.|+|+++.
T Consensus 1019 ~~ktv~~~~ 1027 (1038)
T PRK11904 1019 TEKTVTVNT 1027 (1038)
T ss_pred ceEEEEEcc
Confidence 999998864
|
|
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-78 Score=615.24 Aligned_cols=378 Identities=28% Similarity=0.403 Sum_probs=350.3
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~ 88 (410)
+++.++++++++|+||++.+++.|+..+++.++|++...+...+ ...++|+|||++|+|||||+...+
T Consensus 111 ~~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~l~~~a~~~~~~~~------------~~~~~P~GVV~~I~pwN~P~~~~~ 178 (500)
T TIGR01238 111 LHMPELMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRDVLG------------EFSVESRGVFVCISPWNFPLAIFT 178 (500)
T ss_pred hHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------ceeccCcceEEEECCCchHHHHHH
Confidence 34567799999999999999999999999999999988754321 136899999999999999999999
Q ss_pred hhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHH
Q 015249 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 168 (410)
Q Consensus 89 ~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~ 168 (410)
+++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.|++++.|+||||+.+|+.|.+.
T Consensus 179 ~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~ 258 (500)
T TIGR01238 179 GQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQT 258 (500)
T ss_pred HHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998766789999999999999999999999999999
Q ss_pred hcccc---ceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 169 AAGTV---KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 169 ~~~~~---~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
++++. +|+++|+||+||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 259 aa~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p 338 (500)
T TIGR01238 259 LAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVP 338 (500)
T ss_pred HhhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCC
Confidence 98876 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcc---cCCCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR---HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~---~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
.++++++||++++.+++++.+++++++..|++++.++.. ...+++|++|||+.+ +++.+++||+||||++|++|+
T Consensus 339 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~ 416 (500)
T TIGR01238 339 HLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYK 416 (500)
T ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeC
Confidence 999999999999999999999999999999998754321 113589999999973 688899999999999999998
Q ss_pred --CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCccCCCCCCCC-CCChHHHHHhhh
Q 015249 323 --TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGMDEFL 397 (410)
Q Consensus 323 --~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~--~~~~pfGg~~~SG~g-~~~g~~~l~~~~ 397 (410)
+.||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.... .+.+||||+|.||+| +++|.+++++|+
T Consensus 417 ~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~ 496 (500)
T TIGR01238 417 ARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLT 496 (500)
T ss_pred CCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHHHHH
Confidence 699999999999999999999999999999999999999999987653 356799999999999 799999999999
Q ss_pred eee
Q 015249 398 EIK 400 (410)
Q Consensus 398 ~~k 400 (410)
+.|
T Consensus 497 ~~k 499 (500)
T TIGR01238 497 QVQ 499 (500)
T ss_pred hhc
Confidence 987
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-78 Score=636.27 Aligned_cols=389 Identities=25% Similarity=0.326 Sum_probs=347.5
Q ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHh--------CccccCCCCC-cceeEEeeec-eEEEEEcCC
Q 015249 11 KMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVY--------GEIIPATLPD-RRLFVLKQPV-GVAGAITPW 80 (410)
Q Consensus 11 ~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~P~-Gvv~~i~p~ 80 (410)
+.++++ +++|+|||+.+++.|+..+++.++||+..++... ++..+...++ ...+..++|+ |||++|+||
T Consensus 80 ~~ela~-l~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~Pw 158 (675)
T PRK11563 80 KEELYA-LSAQTGATRRDSWIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHINAF 158 (675)
T ss_pred HHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEECCC
Confidence 344566 5899999999999999999999999999886542 2222211112 2246788997 999999999
Q ss_pred CcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcH
Q 015249 81 NFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGST 159 (410)
Q Consensus 81 n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~ag-lP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~ 159 (410)
|||++..++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|+++|+.. ..+..+++++.|.||||+
T Consensus 159 NfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~---~~~~~~~~i~~v~FTGS~ 235 (675)
T PRK11563 159 NFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAG---DLLDHLDGQDVVTFTGSA 235 (675)
T ss_pred chHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH---HHhhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999999 99999999998532 233334679999999999
Q ss_pred HHHHHHHHH--hccccceeeeeccCCCcEEeccCCC-----HHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHH
Q 015249 160 AVGKKLMAG--AAGTVKKVSLELGGNAPCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 232 (410)
Q Consensus 160 ~~~~~i~~~--~~~~~~~~~~e~gg~~~~iV~~~ad-----l~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~ 232 (410)
++|+.|++. ++++++|+++|+|||||+||++||| ++.+++.+++++|.|+||.|++++|||||+++||+|+++
T Consensus 236 ~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~ 315 (675)
T PRK11563 236 ATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEA 315 (675)
T ss_pred HHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHHHH
Confidence 999999985 4578999999999999999999995 999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc-------CCCCceecceEeccCCC--C
Q 015249 233 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH-------SLGMTFYEPTVLSNVKS--E 303 (410)
Q Consensus 233 L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~-------~~~~~~~~Ptv~~~~~~--~ 303 (410)
|+++++++++|+|.++++++||++++.+++++.++|++++++ +++++||... ..+|+|++|||+.++++ +
T Consensus 316 l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~ 394 (675)
T PRK11563 316 LRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEA 394 (675)
T ss_pred HHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCchhh
Confidence 999999999999999999999999999999999999999998 9999999531 12489999999999988 5
Q ss_pred CcccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcc--eeEEEECCCCC---------CCC
Q 015249 304 MLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLI---------STE 372 (410)
Q Consensus 304 ~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~--~g~v~iN~~~~---------~~~ 372 (410)
+++++||+||||++|++|+|.||||+++|+++|||++||||+|.+.+.+++++++ +|.||||+.+. ..+
T Consensus 395 ~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~ 474 (675)
T PRK11563 395 PAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLP 474 (675)
T ss_pred hhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCc
Confidence 7899999999999999999999999999999999999999999999999999997 99999997531 136
Q ss_pred CCCccCCCCCCCCCC-ChHHHHHhhheeeEEEE
Q 015249 373 VAPFGGVKQSGLGRE-GSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 373 ~~pfGg~~~SG~g~~-~g~~~l~~~~~~k~v~~ 404 (410)
.+||||+|.||+|++ +|.+++++|++.|+|..
T Consensus 475 ~~pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~ 507 (675)
T PRK11563 475 QLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQG 507 (675)
T ss_pred CCCcCCCCCCCCCccccchhHHHHhheeeeeec
Confidence 789999999999999 57999999999998754
|
|
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-77 Score=600.05 Aligned_cols=385 Identities=34% Similarity=0.530 Sum_probs=351.7
Q ss_pred HHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCcc-c--cCCCCCcceeEEeeeceEEEEEcCCCcch
Q 015249 9 KQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEI-I--PATLPDRRLFVLKQPVGVAGAITPWNFPL 84 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~ 84 (410)
+++.++++++.+|+||++.++. .|+..+++.+++++.......+.. . .....+...+.+++|+|||++|+|||||+
T Consensus 35 ~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~ 114 (426)
T cd07087 35 ENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPL 114 (426)
T ss_pred HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCCceEEEEecCcEEEEEcCCchHH
Confidence 4456679999999999988776 599999999999998876654322 1 11113446788999999999999999999
Q ss_pred hhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHH
Q 015249 85 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 164 (410)
Q Consensus 85 ~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~ 164 (410)
+..++++++||++||+||+|||+.+|.++..++++|.+ |+|+|++++++|+ .+.+..|+.|+ ++.|.||||+++++.
T Consensus 115 ~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv~~vv~g~-~~~~~~l~~~~-v~~V~ftGs~~~g~~ 191 (426)
T cd07087 115 QLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEAVAVVEGG-VEVATALLAEP-FDHIFFTGSPAVGKI 191 (426)
T ss_pred HHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCEEEEEeCC-chHHHHHHhCC-CCEEEEeCChHHHHH
Confidence 99999999999999999999999999999999999999 6999999999984 45688899998 999999999999999
Q ss_pred HHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCC
Q 015249 165 LMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244 (410)
Q Consensus 165 i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~ 244 (410)
|.+.++++++|+++|+||+||+||++|+|++.+++.+++++|.++||.|+++++||||++++|+|+++|++++++++.|+
T Consensus 192 i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~ 271 (426)
T cd07087 192 VMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGED 271 (426)
T ss_pred HHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhccCCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997666
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 245 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 245 ~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
| ++.+++||++++.+.+++.++++++ ++++||... .+++|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 272 ~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~ 344 (426)
T cd07087 272 P-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQVD-KEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDL 344 (426)
T ss_pred C-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccC-CCCCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCH
Confidence 5 5789999999999999999998853 889998664 35789999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
+|||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.+. ..+.+||||+|.||+|+++|.+++++||+.|++
T Consensus 345 ~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~ 424 (426)
T cd07087 345 DEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSV 424 (426)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcccccCCCCCCCCCCCcccCCCccCHHHHHHhccceee
Confidence 999999999999999999999999999999999999999998764 347899999999999999999999999999987
Q ss_pred E
Q 015249 403 C 403 (410)
Q Consensus 403 ~ 403 (410)
+
T Consensus 425 ~ 425 (426)
T cd07087 425 L 425 (426)
T ss_pred c
Confidence 4
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-76 Score=597.60 Aligned_cols=371 Identities=23% Similarity=0.338 Sum_probs=334.6
Q ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccc--cCCCCCcceeEEeeeceEEEEEcCCCcchhhhh
Q 015249 11 KMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEII--PATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88 (410)
Q Consensus 11 ~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~ 88 (410)
+..+++++++|+|||+.+++.||..+++.++||+....+..+... +....+...+++++|+|||++|+|||||+...+
T Consensus 81 ~~~la~~~~~e~GK~~~~a~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l~~ 160 (489)
T cd07126 81 EDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPA 160 (489)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHHHHH
Confidence 467899999999999999999999999999999998877655442 222235567899999999999999999999999
Q ss_pred hhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHH
Q 015249 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 168 (410)
Q Consensus 89 ~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~ 168 (410)
+++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|++.+ +..++.|+++++|+||||+++|+.|...
T Consensus 161 ~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~~vGr~i~~~ 239 (489)
T cd07126 161 LQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSSKVAERLALE 239 (489)
T ss_pred HHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999986554 5568889999999999999999999887
Q ss_pred hccccceeeeeccCCCcEEeccCC-CHHHHHHHHHHHHHhccCCccccCCeEEEecch-HHHHHHHHHHHHhhcccCCCC
Q 015249 169 AAGTVKKVSLELGGNAPCIVFDDA-DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI-YEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 169 ~~~~~~~~~~e~gg~~~~iV~~~a-dl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~-~~~f~~~L~~~~~~~~~g~~~ 246 (410)
++ +++.+|+||+||+||++|+ |++.+++.+++++|.|+||.|++++|||||+++ +|+|+++|++.++++++|+
T Consensus 240 ~g---~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~g~-- 314 (489)
T cd07126 240 LH---GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED-- 314 (489)
T ss_pred hC---CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcccCC--
Confidence 76 5789999999999999999 999999999999999999999999999999995 6899999999999998875
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHH-CCCeEeeCCcccCC----CC-ceecceEecc------CCCCCcccccceecc
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHSL----GM-TFYEPTVLSN------VKSEMLVSREEVFGP 314 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~-~ga~~~~gg~~~~~----~~-~~~~Ptv~~~------~~~~~~~~~eE~fgP 314 (410)
+++||+++.. .+++.++++++++ +|+++++||..... ++ .|++|||+.. ++++|++++||+|||
T Consensus 315 ---~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGP 390 (489)
T cd07126 315 ---LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGP 390 (489)
T ss_pred ---CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCC
Confidence 4789999998 9999999999997 99999999976421 23 3899999842 567999999999999
Q ss_pred eeeeeecCC--HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeE--EEECCCCCCCCC----CCccCCCCCCCCC
Q 015249 315 VAPLLCFKT--EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGL--VGVNEGLISTEV----APFGGVKQSGLGR 386 (410)
Q Consensus 315 vl~v~~~~~--~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~--v~iN~~~~~~~~----~pfGg~~~SG~g~ 386 (410)
|++|++|+| .+||++++|+++|||++||||+|.++++++++++++|+ |+||+.+...+. .||||.|.||+|+
T Consensus 391 Vl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~g~ 470 (489)
T cd07126 391 FQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGT 470 (489)
T ss_pred EEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCCCC
Confidence 999999999 89999999999999999999999999999999999999 669988775444 9999999999998
Q ss_pred CChHH
Q 015249 387 EGSKY 391 (410)
Q Consensus 387 ~~g~~ 391 (410)
++...
T Consensus 471 ~~~~~ 475 (489)
T cd07126 471 PEAIR 475 (489)
T ss_pred HhHHH
Confidence 76544
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-76 Score=638.75 Aligned_cols=380 Identities=30% Similarity=0.453 Sum_probs=352.8
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
.+++.+++.++++|+||++.++..||..++++++||+....... ....++|+|||++|+|||||+..+
T Consensus 718 e~~~~eL~~l~~~EaGKt~~~A~~EV~eaidflryyA~~a~~~~------------~~~~~~PlGVV~~IsPWNFPlai~ 785 (1318)
T PRK11809 718 EAQMQTLMGLLVREAGKTFSNAIAEVREAVDFLRYYAGQVRDDF------------DNDTHRPLGPVVCISPWNFPLAIF 785 (1318)
T ss_pred HHCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhc------------CCceeecccEEEEECCCccHHHHH
Confidence 34456679999999999999999999999999999998775421 124689999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+++|+.|.+
T Consensus 786 ~g~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~ 865 (1318)
T PRK11809 786 TGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQR 865 (1318)
T ss_pred HHHHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988888999999999999999999999999999
Q ss_pred Hhcccc------ceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcc
Q 015249 168 GAAGTV------KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 241 (410)
Q Consensus 168 ~~~~~~------~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~ 241 (410)
.+++++ +|+++|+||+|++||++|||++.+++.+++|+|.++||.|++.+++|||++++|+|++.|++++++++
T Consensus 866 ~aA~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~ 945 (1318)
T PRK11809 866 NLAGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECR 945 (1318)
T ss_pred HHhhhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcC
Confidence 988765 79999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCCceecceEeccCCCCCcccccceecceeee
Q 015249 242 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPL 318 (410)
Q Consensus 242 ~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~---~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v 318 (410)
+|+|.+.++++||++++.+++++.++|++++.+|++++.++.... ..|+|++|||+.. +++.+++||+||||++|
T Consensus 946 vGdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V 1023 (1318)
T PRK11809 946 MGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHV 1023 (1318)
T ss_pred CCCcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEE
Confidence 999999999999999999999999999999999999998875432 3489999999974 56778999999999999
Q ss_pred eecC--CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCccCCCCCCCCC-CChHHHH
Q 015249 319 LCFK--TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGR-EGSKYGM 393 (410)
Q Consensus 319 ~~~~--~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~--~~~~pfGg~~~SG~g~-~~g~~~l 393 (410)
++|+ +++|+|+++|.++|||+++|||+|.+.++++++++++|+||||+.... ...+||||.|.||+|. .+|+++|
T Consensus 1024 ~~~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL 1103 (1318)
T PRK11809 1024 VRYNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYL 1103 (1318)
T ss_pred EEeCCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHH
Confidence 9997 799999999999999999999999999999999999999999987663 2467999999999995 5999999
Q ss_pred HhhheeeE
Q 015249 394 DEFLEIKY 401 (410)
Q Consensus 394 ~~~~~~k~ 401 (410)
..|++.+.
T Consensus 1104 ~~f~~~~~ 1111 (1318)
T PRK11809 1104 YRLLATRP 1111 (1318)
T ss_pred HHHhccCC
Confidence 99999874
|
|
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-75 Score=637.00 Aligned_cols=383 Identities=28% Similarity=0.412 Sum_probs=356.0
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~ 88 (410)
+++.+++.++++|+||++.++..||..++++++||+........ ...++|+|||++|+|||||+..++
T Consensus 627 ~~~~eL~~l~~~E~GKt~~ea~~Ev~eaid~lr~ya~~a~~~~~------------~~~~~P~GVv~~IsPwNfPlai~~ 694 (1208)
T PRK11905 627 AHMPELFALAVREAGKTLANAIAEVREAVDFLRYYAAQARRLLN------------GPGHKPLGPVVCISPWNFPLAIFT 694 (1208)
T ss_pred HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------CceecCccEEEEEcCCcCHHHHHH
Confidence 34667799999999999999999999999999999998755321 135689999999999999999999
Q ss_pred hhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHH
Q 015249 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 168 (410)
Q Consensus 89 ~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~ 168 (410)
+++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++|++.+.+..|+.||+|+.|.||||+.+++.|.+.
T Consensus 695 g~i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~ 774 (1208)
T PRK11905 695 GQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRT 774 (1208)
T ss_pred HHHHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred hccc---cceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 169 AAGT---VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 169 ~~~~---~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
++++ .+|+++|+||+|++||++|||++.+++.+++|+|.++||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 775 ~A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP 854 (1208)
T PRK11905 775 LAKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDP 854 (1208)
T ss_pred HHhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCc
Confidence 8876 4899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceecceEeccCCCCCcccccceecceeeeeecC--
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK-- 322 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~-~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~-- 322 (410)
.+..+++||++++.+++++.++|+++...|+.++.++.... .+|+|+.|||+.. +++.+++||+||||++|++|+
T Consensus 855 ~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~--~~~~~~~eEiFGPVL~V~~y~~~ 932 (1208)
T PRK11905 855 WRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIEI--DSISDLEREVFGPVLHVVRFKAD 932 (1208)
T ss_pred hhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEec--CChHHhcCCccCceEEEEEeCCC
Confidence 99999999999999999999999999999998887764322 3589999999963 567889999999999999998
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCC--CCCCccCCCCCCCCC-CChHHHHHhhhee
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLGR-EGSKYGMDEFLEI 399 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~--~~~pfGg~~~SG~g~-~~g~~~l~~~~~~ 399 (410)
+++|+|+++|.++|||+++|||+|.+.++++++++++|+||||+..... ..+||||+|.||+|. .+|+++|+.|++.
T Consensus 933 dldeaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~ 1012 (1208)
T PRK11905 933 ELDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVRE 1012 (1208)
T ss_pred CHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhc
Confidence 6999999999999999999999999999999999999999999877632 468999999999996 7999999999999
Q ss_pred eEEEEe
Q 015249 400 KYVCLG 405 (410)
Q Consensus 400 k~v~~~ 405 (410)
|++++.
T Consensus 1013 k~v~~~ 1018 (1208)
T PRK11905 1013 APTPIP 1018 (1208)
T ss_pred ceeecc
Confidence 999764
|
|
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-74 Score=581.91 Aligned_cols=395 Identities=50% Similarity=0.789 Sum_probs=371.6
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~ 88 (410)
.++.++++++..++||++.+++.|+..+++.+++++...+++.+........+...+.+++|+|||++|+|||+|+...+
T Consensus 35 ~~~~~l~~~~~~etG~~~~~~~~ei~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~ 114 (432)
T cd07078 35 ERREELAALETLETGKPIEEALGEVARAADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAA 114 (432)
T ss_pred HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEeecceEEEECCCccHHHHHH
Confidence 34466799999999999999999999999999999988877655433223346678899999999999999999999999
Q ss_pred hhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHH
Q 015249 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 168 (410)
Q Consensus 89 ~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~ 168 (410)
+.+++||++||+||+|||+.+|.++..+.++|.++|+|+++++++++++.+.+..|+.|++++.|.||||..+++.|.+.
T Consensus 115 ~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~ 194 (432)
T cd07078 115 WKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRA 194 (432)
T ss_pred HHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998766688999999999999999999999999999
Q ss_pred hccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCCC
Q 015249 169 AAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 248 (410)
Q Consensus 169 ~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~ 248 (410)
++++++|+++|+||++++||++++|++.+++.+++++|.++||.|+++++||||++++++|+++|.++++++++|+|.++
T Consensus 195 a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~ 274 (432)
T cd07078 195 AAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDP 274 (432)
T ss_pred HhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC-CCceecceEeccCCCCCcccccceecceeeeeecCCHHHH
Q 015249 249 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327 (410)
Q Consensus 249 ~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~-~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ea 327 (410)
++++||++++.+++++.++++++.+.|+++++||..... +++|++|||+.++++++++++||+||||++|++|++.+||
T Consensus 275 ~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 354 (432)
T cd07078 275 DTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEA 354 (432)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHH
Confidence 999999999999999999999999999999999876532 4799999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 328 i~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
|+++|+.++||+++|||+|.+.++++++++++|+|+||+.+.. .+.+||||.+.||+|+++|++|+++|++.|+|+
T Consensus 355 i~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 355 IELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred HHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 9999999999999999999999999999999999999998876 889999999999999999999999999999885
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-73 Score=577.28 Aligned_cols=381 Identities=24% Similarity=0.300 Sum_probs=339.9
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHh--CccccCC------CCCcceeEEeeeceEEEEEcC
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVY--GEIIPAT------LPDRRLFVLKQPVGVAGAITP 79 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~~~~P~Gvv~~i~p 79 (410)
++++.++++++++|+|||+.+++.|+..+++.+++++....... +...... .++...+++++|+|||++|+|
T Consensus 35 ~~~~~ela~~~~~e~Gkp~~~~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p 114 (454)
T cd07129 35 EALGDELVARAHAETGLPEARLQGELGRTTGQLRLFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGA 114 (454)
T ss_pred HHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCccceEEeeccceEEEECC
Confidence 34566779999999999999999999999999999998765422 2211110 112345788999999999999
Q ss_pred CCcchhh--hhhhccchhccCCeEEEecCCCcHHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHhHHhcCCCccEE
Q 015249 80 WNFPLAM--ITRKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKI 153 (410)
Q Consensus 80 ~n~p~~~--~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l----~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v 153 (410)
||||+.. .++++++||++||+||+|||+.+|.++.++.+++ .++|+|+|++|+++|++.+.+..|+.|++|+.|
T Consensus 115 ~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V 194 (454)
T cd07129 115 SNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAV 194 (454)
T ss_pred CCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEE
Confidence 9999987 4589999999999999999999999999887776 589999999999998766789999999999999
Q ss_pred EEeCcHHHHHHHHHHhcc--ccceeeeeccCCCcEEeccCC---CHHHHHHHHHHHHHhccCCccccCCeEEEecc-hHH
Q 015249 154 TFTGSTAVGKKLMAGAAG--TVKKVSLELGGNAPCIVFDDA---DLNVAVNGALAAKFRNSGQTCVCANRVLVQEG-IYE 227 (410)
Q Consensus 154 ~ftGs~~~~~~i~~~~~~--~~~~~~~e~gg~~~~iV~~~a---dl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~ 227 (410)
+||||+.+|+.|.+.+++ +.+|+++|+||+||+||++|+ |++.+++.+++++|.|+||.|++++|||||++ ++|
T Consensus 195 ~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d 274 (454)
T cd07129 195 GFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGD 274 (454)
T ss_pred EEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHH
Confidence 999999999999999987 689999999999999999999 89999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHC-CCeEeeCCcccCCCCceecceEeccCC---CC
Q 015249 228 KFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK-GAKVLLGGRRHSLGMTFYEPTVLSNVK---SE 303 (410)
Q Consensus 228 ~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~-ga~~~~gg~~~~~~~~~~~Ptv~~~~~---~~ 303 (410)
+|+++|.++++++++ ||++++...++..+.+++++++ |+++++||... .+++|++|||+...+ ++
T Consensus 275 ~f~~~l~~~~~~~~~----------g~~~~~~~~~~~~~~i~~a~~~~ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~ 343 (454)
T cd07129 275 AFIAALAEALAAAPA----------QTMLTPGIAEAYRQGVEALAAAPGVRVLAGGAAA-EGGNQAAPTLFKVDAAAFLA 343 (454)
T ss_pred HHHHHHHHHHhccCC----------CCCcChHHHHHHHHHHHHHHhcCCcEEEeCCCcC-CCCCccCCEEEEccCCcccc
Confidence 999999999999874 4677777788888889999988 99999999754 357999999997555 68
Q ss_pred CcccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCC--HHHHHHHHhhc--ceeEEEECCCCCC-C--CCCCc
Q 015249 304 MLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN--LQRTWRVSEAL--EYGLVGVNEGLIS-T--EVAPF 376 (410)
Q Consensus 304 ~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d--~~~~~~~~~~~--~~g~v~iN~~~~~-~--~~~pf 376 (410)
+++++||+||||++|++|+|.||+|+++|++++||++||||+| .+.++++++++ ++|+|+||+++.. . +.+||
T Consensus 344 ~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pf 423 (454)
T cd07129 344 DPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVH 423 (454)
T ss_pred chhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCC
Confidence 9999999999999999999999999999999999999999999 79999999999 6999999987653 2 48999
Q ss_pred cC-CCCCCCCCC--ChHHHHHhhhee
Q 015249 377 GG-VKQSGLGRE--GSKYGMDEFLEI 399 (410)
Q Consensus 377 Gg-~~~SG~g~~--~g~~~l~~~~~~ 399 (410)
|| +|.||+|++ +|.+++++||++
T Consensus 424 gG~~k~sg~g~~~~~g~~~~~~~~~~ 449 (454)
T cd07129 424 GGPYPATTDPRFTSVGTAAIERFLRP 449 (454)
T ss_pred CCCcCCCCCCccccccHHHHHHhccc
Confidence 99 999999999 799999999986
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-73 Score=569.72 Aligned_cols=382 Identities=18% Similarity=0.192 Sum_probs=339.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHh--CccccCCC--CCcceeEEeeeceEEEEEcCCCcc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVY--GEIIPATL--PDRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
++++.++++++++|+|||+ ++..|+..+++.++|++..+.... .+...... .+...+.+++|+|||++|+|||||
T Consensus 35 ~~~~~ela~~~~~e~Gk~~-~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P 113 (442)
T cd07084 35 AAKSYDIAAGAVLVTGKGW-MFAENICGDQVQLRARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFP 113 (442)
T ss_pred HhhHHHHHHHHHHHcCCch-hhhhhhcchHHHHHHHHHHHHhccccccccccCCCCccccceEEeecceeEEEEcCCccH
Confidence 4456677999999999999 777899999999999998886532 11111111 134578899999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCC-CCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI-PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 162 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~agl-P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~ 162 (410)
++..++++++||++||+||+|||+.+|.++..+.+++.++|+ |+|+++++++++. .+..|+.|++++.|+||||++++
T Consensus 114 ~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g~~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~~~g 192 (442)
T cd07084 114 LWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGK-TMQALLLHPNPKMVLFTGSSRVA 192 (442)
T ss_pred hHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCccceEEeeCCcH-HHHHHHcCCCCCEEEEECCHHHH
Confidence 999999999999999999999999999999999999999999 9999999999765 88999999999999999999999
Q ss_pred HHHHHHhccccceeeeeccCCCcEEeccCC-CHHHHHHHHHHHHHhccCCccccCCeEEEecc-hHHHHHHHHHHHHhhc
Q 015249 163 KKLMAGAAGTVKKVSLELGGNAPCIVFDDA-DLNVAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEKFADAFSKAVKNL 240 (410)
Q Consensus 163 ~~i~~~~~~~~~~~~~e~gg~~~~iV~~~a-dl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~~f~~~L~~~~~~~ 240 (410)
+.|++.++. +|+++|+||+||+||++|+ |++.+++.+++++|.++||.|+++++||||++ ++++|+++|+++++++
T Consensus 193 ~~i~~~a~~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~ 270 (442)
T cd07084 193 EKLALDAKQ--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARR 270 (442)
T ss_pred HHHHHhccC--CcEEEeccCcCcEEECCChhhHHHHHHHHHHHHhcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhc
Confidence 999998864 8999999999999999999 69999999999999999999999999999999 9999999999999999
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHHC-CCeEeeCCcccC------CCCceecceEeccCCCCC---cccccc
Q 015249 241 KVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK-GAKVLLGGRRHS------LGMTFYEPTVLSNVKSEM---LVSREE 310 (410)
Q Consensus 241 ~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~-ga~~~~gg~~~~------~~~~~~~Ptv~~~~~~~~---~~~~eE 310 (410)
++| ++++||++++. +.+++++++.. |+++++||.... ..|+|++|||+.++++++ ++++||
T Consensus 271 ~~g-----~~~~gpl~~~~----~~~~i~~a~~~gga~~~~gg~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE 341 (442)
T cd07084 271 KLE-----DLLLGPVQTFT----TLAMIAHMENLLGSVLLFSGKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEE 341 (442)
T ss_pred ccC-----ccccChhhhHH----HHHHHHHHHhcCCcEEEeCCcccccCCCCCcCCcccCCeEEEecCcccccchHHhee
Confidence 998 67899987654 55556666777 599999987521 147899999999999987 999999
Q ss_pred eecceeeeeecCC--HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhc-ceeEEEECCC-CC-CCCCCCccC-CCCCCC
Q 015249 311 VFGPVAPLLCFKT--EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL-EYGLVGVNEG-LI-STEVAPFGG-VKQSGL 384 (410)
Q Consensus 311 ~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~-~~g~v~iN~~-~~-~~~~~pfGg-~~~SG~ 384 (410)
+||||++|++|+| .+|+++++|+++|||+++|||+|.+.++++++++ ++|+||||+. +. ..+..|||| .|.||+
T Consensus 342 ~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~ 421 (442)
T cd07084 342 IFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPR 421 (442)
T ss_pred ccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHHHHHhcCeEEECCCCCCCccccccCCCCCCCCCC
Confidence 9999999999999 9999999999999999999999999999999999 9999999976 33 445677766 889999
Q ss_pred CCCC-hHHHHHhhheeeEE
Q 015249 385 GREG-SKYGMDEFLEIKYV 402 (410)
Q Consensus 385 g~~~-g~~~l~~~~~~k~v 402 (410)
|++. |.+++++||+...+
T Consensus 422 g~~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 422 GAGIGGPEAIKLVWRCHAE 440 (442)
T ss_pred CccccchHHhhheeeeeee
Confidence 9995 99999999998754
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-73 Score=533.40 Aligned_cols=389 Identities=31% Similarity=0.488 Sum_probs=351.4
Q ss_pred HHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCcc-ccCC--CCCcceeEEeeeceEEEEEcCCCcch
Q 015249 9 KQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEI-IPAT--LPDRRLFVLKQPVGVAGAITPWNFPL 84 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~p~ 84 (410)
+++..+..++..+.+|+-.++. .|+......++|+....+.+.... .... .-....+++.+|+|||++|+|||||+
T Consensus 39 e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~ 118 (477)
T KOG2456|consen 39 ENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVKPEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPL 118 (477)
T ss_pred hhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhccccccCcccccccCceeEEecCCceEEEEccCCCcc
Confidence 3445558889999999877765 588888888888777666543322 1111 12345788999999999999999999
Q ss_pred hhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHH
Q 015249 85 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 164 (410)
Q Consensus 85 ~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~ 164 (410)
...+.++++||++||+||+|||+.+|.++..+++++-+. ++.+++.++.|. .+....|+.+ ++|.|.||||+.+|+.
T Consensus 119 ~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~~~~~VV~Gg-v~ETt~LL~~-rfD~IfyTGsp~VgkI 195 (477)
T KOG2456|consen 119 NLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQDLIRVVNGG-VPETTELLKQ-RFDHIFYTGSPRVGKI 195 (477)
T ss_pred eeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCcceEEEecCC-CchHHHHHHh-hccEEEecCCchHHHH
Confidence 999999999999999999999999999999999999999 999999999995 4555567766 7999999999999999
Q ss_pred HHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCC
Q 015249 165 LMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244 (410)
Q Consensus 165 i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~ 244 (410)
|+.+++++++||++|+|||+|++|++++|++-++++|+|+++.|+||.|.+++.|+++.+++.+|+++++..++++ .|.
T Consensus 196 im~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eF-YG~ 274 (477)
T KOG2456|consen 196 IMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWMNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEF-YGE 274 (477)
T ss_pred HHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHH-hCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998 788
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 245 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 245 ~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
..+++.+++.+++..+++|+..++++ ..++..||..+. ...|++|||+.++++++++++||+|||||+|+.+++.
T Consensus 275 n~~eS~d~sRiIn~~hf~Rl~~ll~~----~~kv~~Gg~~d~-~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l 349 (477)
T KOG2456|consen 275 NPKESKDLSRIINQRHFQRLSALLDE----TGKVAIGGESDE-SDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSL 349 (477)
T ss_pred CccccccHHHHhhHHHHHHHHHHhcC----CCceecCCccch-hhcccCCeEEecCCCCChhhhhhhccCccceeEhhhH
Confidence 88889999999999999999999884 278999998773 4579999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
+|+|+.+|.-+..|++|+||+|...+.++..++.+|.|.+|+... ....+||||++.||+|++||+++++.|++.|++
T Consensus 350 ~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~i~H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~ 429 (477)
T KOG2456|consen 350 DEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDVIMHVTLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSC 429 (477)
T ss_pred HHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecceEEEEEeeccCcCCcCccccccccccccccccccchhh
Confidence 999999999999999999999999999999999999999999765 467899999999999999999999999999998
Q ss_pred EEec
Q 015249 403 CLGD 406 (410)
Q Consensus 403 ~~~~ 406 (410)
..+.
T Consensus 430 l~rs 433 (477)
T KOG2456|consen 430 LLRS 433 (477)
T ss_pred hhcc
Confidence 7664
|
|
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-70 Score=555.88 Aligned_cols=377 Identities=24% Similarity=0.301 Sum_probs=321.8
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHH-----HHHHHHHHHHHHHHHHHHHhCccc---cCCCCCc---ceeEEeeeceEEEE
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLR-----EVDYGAKFIEFYAEEAKRVYGEII---PATLPDR---RLFVLKQPVGVAGA 76 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~-----ei~~a~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~P~Gvv~~ 76 (410)
++++.++++++++|+||++.+++. ++.++++.++|++....++.++.. +....+. ..+..++|+|||++
T Consensus 120 ~~~~~elA~~~~~etGk~~~~a~e~gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~v 199 (551)
T TIGR02288 120 NARSFEIAHAVMHTTGQAFMMAFQAGGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALV 199 (551)
T ss_pred HHCHHHHHHHHHHHhCCCHHHHHhccChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEE
Confidence 445677899999999999999864 788899999999988777665432 2111111 12347899999999
Q ss_pred EcCCCcchhhhhhhccchhccCCeEEEecCCCcHHHHH----HHHHHHHHcCCCCCcEEEEeCC-chhHHhHHhcCCCcc
Q 015249 77 ITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL----AAAELALQAGIPPGVVNVVMGN-APDIGDALLTSPQVR 151 (410)
Q Consensus 77 i~p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~----~l~~~l~~aglP~g~v~~v~g~-~~~~~~~l~~~~~v~ 151 (410)
|+|||||+++.++++++||++||+||+|||+.+|+++. .+.++|.++|+|+|++|++++. +.+.++.|+.||+|+
T Consensus 200 I~PwNfP~~~~~~~l~~ALaaGN~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~ 279 (551)
T TIGR02288 200 IGCSTFPTWNTYPGLFASLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVR 279 (551)
T ss_pred EcCcccHHHHHHHHHHHHHHcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCcc
Confidence 99999999999999999999999999999999998654 6779999999999999999985 677899999999999
Q ss_pred EEEEeCcHHHHHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecc-------
Q 015249 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG------- 224 (410)
Q Consensus 152 ~v~ftGs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~------- 224 (410)
.|.||||+.+|+.|.+.++ .+++++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|||||++
T Consensus 280 ~I~FTGSt~~G~~I~~~aa--~~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g 357 (551)
T TIGR02288 280 IIDFTGSNAFGQWLEQNAR--QAQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQG 357 (551)
T ss_pred EEEEECCHHHHHHHHHhcc--cCcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccc
Confidence 9999999999999998876 4789999999999999999999999999999999999999999999999999
Q ss_pred --hHHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceecceEec
Q 015249 225 --IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLS 298 (410)
Q Consensus 225 --~~~~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~----~~~~~~~Ptv~~ 298 (410)
++|+|+++|+++++++ +|+|.++.+++||++++.+++++ +++++.| +++++|.... ++.+|++|||+.
T Consensus 358 ~~i~def~~~L~~~~~~l-vGdp~~~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~ 431 (551)
T TIGR02288 358 RKSYDEVAADLATAIDGL-LGDPARATAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLK 431 (551)
T ss_pred hhHHHHHHHHHHHHHHHh-cCCcccccccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEE
Confidence 7999999999999999 99999999999999999999996 4566678 6666664321 234689999995
Q ss_pred cCCCCCcccccceecceeeeeecCCHHHHHHHhhcC--CCC-cEEEEecCCHHHHHHHHhhc----------ceeEEEEC
Q 015249 299 NVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT--NAG-LAAYIFTNNLQRTWRVSEAL----------EYGLVGVN 365 (410)
Q Consensus 299 ~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~--~~g-l~~sv~s~d~~~~~~~~~~~----------~~g~v~iN 365 (410)
..+++|++++||+||||++|++|+|.||||+++|++ +|| |+++|||+|.++++++.+++ ++|.|+||
T Consensus 432 ~~~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN 511 (551)
T TIGR02288 432 CDAADEAAYMQERFGPIAFVVAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVN 511 (551)
T ss_pred cCCCCCHHHhCCCcCCEEEEEEECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEc
Confidence 444599999999999999999999999999999998 566 99999999999999999998 66666666
Q ss_pred CCCCCCCCCCccCCCCCCCCCC-ChHHHHHhhhe
Q 015249 366 EGLISTEVAPFGGVKQSGLGRE-GSKYGMDEFLE 398 (410)
Q Consensus 366 ~~~~~~~~~pfGg~~~SG~g~~-~g~~~l~~~~~ 398 (410)
.. .+|++.+.||.+.. +..+.--.|..
T Consensus 512 ~~------~~~~~~~~sg~n~~a~~~~~~~~~~~ 539 (551)
T TIGR02288 512 QS------AAFSDFHGTGGNPAANASLSDGAFVA 539 (551)
T ss_pred cC------CCCCCCCCCCCCCccCCcccchhhhh
Confidence 54 46788888888766 33344444443
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-71 Score=550.52 Aligned_cols=363 Identities=19% Similarity=0.201 Sum_probs=311.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-c-cC--CCCCcceeEEeeeceEEEEEcCCCcc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEI-I-PA--TLPDRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~-~-~~--~~~~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
++++.++++++++|+||++.++. ++.++|++... .+.. . +. ..++...+++++|+|||++|+|||||
T Consensus 40 ~~~~~ela~~~~~E~Gk~~~~~~------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P 110 (429)
T cd07121 40 LSNAEELAEMAVEETGMGRVEDK------IAKNHLAAEKT---PGTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNP 110 (429)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHH------HHHHHHHHHhc---CcccccccccccCCCcceEEEEcccceEEEEccCCCc
Confidence 44566789999999999987764 34456655422 1111 1 11 11223467889999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGST 159 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l----~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~ 159 (410)
+..+++++++||++||+||+|||+.+|.++..+.+++ .++|+|+|++|++++++.+.+..|+.||+|+.|+||||+
T Consensus 111 ~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~ 190 (429)
T cd07121 111 TETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGP 190 (429)
T ss_pred hhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCH
Confidence 9999999999999999999999999999999988877 588999999999998667789999999999999999999
Q ss_pred HHHHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhh
Q 015249 160 AVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN 239 (410)
Q Consensus 160 ~~~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~ 239 (410)
.+|+.|++. .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++ .
T Consensus 191 ~~g~~v~~~----~k~~~lelGGk~p~iV~~dADld~Aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~- 264 (429)
T cd07121 191 AVVKAALSS----GKKAIGAGAGNPPVVVDETADIEKAARDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN-G- 264 (429)
T ss_pred HHHHHHHhC----CCceEeecCCCceEEEecCCCHHHHHHHHHhcccccCCCCCCccceEEEeHHHHHHHHHHHHHC-C-
Confidence 999999875 3999999999999999999999999999999999999999999999999999999999999886 1
Q ss_pred cccCCCCCCCccccccCCHHHHHHHHHHHHHHHHC--CCeEeeCCccc---CCCCceec---ceEeccCCCCCcccccce
Q 015249 240 LKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK--GAKVLLGGRRH---SLGMTFYE---PTVLSNVKSEMLVSREEV 311 (410)
Q Consensus 240 ~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~--ga~~~~gg~~~---~~~~~~~~---Ptv~~~~~~~~~~~~eE~ 311 (410)
.+++++++.+++.++++++... |+++++||... ...|+|+. |||+.+++++|++++||+
T Consensus 265 -------------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~ 331 (429)
T cd07121 265 -------------AYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQ 331 (429)
T ss_pred -------------CEEcCHHHHHHHHHhhcccCCCccccccccCcCHHHHHHHcCCCCCCCCeEEEEecCCCCCcccccc
Confidence 2478999999999999998864 68999988541 11367776 599999999999999999
Q ss_pred ecceeeeeecCCHHHHHHHhhcCCCCc--EEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCC--CCC
Q 015249 312 FGPVAPLLCFKTEEEAIHMANDTNAGL--AAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGL--GRE 387 (410)
Q Consensus 312 fgPvl~v~~~~~~~eai~~~n~~~~gl--~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~--g~~ 387 (410)
||||++|++|+|+||||+++|+++||| +++|||+|.++++++++++++|+||||+++. +.+||||+|.|++ |..
T Consensus 332 FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~l~aG~v~iN~~~~--~~~p~gG~k~s~~~~~~~ 409 (429)
T cd07121 332 MMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAMQTTIFVKNGPSY--AGLGVGGEGYTTFTIAGP 409 (429)
T ss_pred ccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhhCCceEEEEcCCCc--CccccCCCccceEEecCC
Confidence 999999999999999999999999999 9999999999999999999999999998765 6799999999998 555
Q ss_pred ChHHHHHhhheeeEEEE
Q 015249 388 GSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 388 ~g~~~l~~~~~~k~v~~ 404 (410)
-| +|+ |..|+++.
T Consensus 410 ~~-~~~---~~~~~~~~ 422 (429)
T cd07121 410 TG-EGL---TSARTFTR 422 (429)
T ss_pred cC-cCc---cChhhhhe
Confidence 44 443 55555443
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-71 Score=511.79 Aligned_cols=397 Identities=32% Similarity=0.501 Sum_probs=361.1
Q ss_pred HHHHHHHHHHHHhhchHHHH-HHHHHHHHHHHHHHHHHHHHHhC-ccccCCC--CCcceeEEeeeceEEEEEcCCCcchh
Q 015249 10 QKMLYLRLLMRLILGASSLL-LREVDYGAKFIEFYAEEAKRVYG-EIIPATL--PDRRLFVLKQPVGVAGAITPWNFPLA 85 (410)
Q Consensus 10 ~~~~~~~~~~~e~g~~~~~a-~~ei~~a~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~P~Gvv~~i~p~n~p~~ 85 (410)
+++.+++..+++|||++-+| .+||--+.+.+.|.....++... +..+... --.-.++.++|+||+..|.|||||+.
T Consensus 124 nQdliaevacrDtGKTmvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfH 203 (583)
T KOG2454|consen 124 NQDLIAEVACRDTGKTMVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFH 203 (583)
T ss_pred chhheeeeeecccCchhhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchh
Confidence 34455566677899997765 47999999999988766555332 2212111 12335688999999999999999999
Q ss_pred hhhhhccchhccCCeEEEecCCCcHHHHH----HHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHH
Q 015249 86 MITRKVGPALACGCTVVVKPSEFTPLTAL----AAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 161 (410)
Q Consensus 86 ~~~~~~~~AL~~Gn~vvlkps~~~~~~~~----~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~ 161 (410)
+.+.+++.||.+||++|+|-|+.+.++.. .+.++|+..|-|+++|+++++- ++.++.|.+|+.++.+.|.||..+
T Consensus 204 N~lgPiiaAlFsGNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itcl-pd~a~~ltSh~g~khitFiGSqpv 282 (583)
T KOG2454|consen 204 NILGPIIAALFSGNAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCL-PDTAEALTSHSGVKHITFIGSQPV 282 (583)
T ss_pred hhhhHHHHHHhcCCeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecC-cchHhHhhcCCCcceEEEecCcHH
Confidence 99999999999999999999999998764 4556678889999999999985 688999999999999999999999
Q ss_pred HHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcc
Q 015249 162 GKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 241 (410)
Q Consensus 162 ~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~ 241 (410)
++.|++.++++++|+++|+|||+++|+++|+|+++.+.-++++.|..+||.|.+.+|++||+++||.|+..|.++++.++
T Consensus 283 ak~i~~~AAk~LTPv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r 362 (583)
T KOG2454|consen 283 AKMIMRNAAKTLTPVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVR 362 (583)
T ss_pred HHHHHHhhhhhcCcEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceecceEeccCCCCCcccccceecceee
Q 015249 242 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAP 317 (410)
Q Consensus 242 ~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~ 317 (410)
.|.|...+.|||.|++..+++.++.++++|+.+||+++.||.+.. +.|.|++||++.+++++|.+++||.||||++
T Consensus 363 ~G~~~~~~vDMGAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~ 442 (583)
T KOG2454|consen 363 AGPPLTGRVDMGAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMP 442 (583)
T ss_pred cCCCccCccchhhhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchh
Confidence 999999999999999999999999999999999999999998764 4689999999999999999999999999999
Q ss_pred eeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhh
Q 015249 318 LLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEF 396 (410)
Q Consensus 318 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pfGg~~~SG~g~~~g~~~l~~~ 396 (410)
++.+++.|++++++|++++||.++||+.|..+.++++.++++|.|.||+... +..++||||++.||+|+..|.+||+..
T Consensus 443 im~ak~~eh~i~lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyGrFaG~EGLrg~ 522 (583)
T KOG2454|consen 443 IMQAKTDEHVIKLANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYGRFAGIEGLRGC 522 (583)
T ss_pred hhhcCChHHHHhhccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCccccccHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999876 567899999999999999999999999
Q ss_pred heeeEEEEecc
Q 015249 397 LEIKYVCLGDM 407 (410)
Q Consensus 397 ~~~k~v~~~~~ 407 (410)
+..|.|.+..+
T Consensus 523 Cn~Ksv~yd~~ 533 (583)
T KOG2454|consen 523 CNVKSVAYDRV 533 (583)
T ss_pred hcccceeccch
Confidence 99999977643
|
|
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-69 Score=538.46 Aligned_cols=375 Identities=17% Similarity=0.218 Sum_probs=313.7
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHH--HHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAK--FIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLA 85 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~ 85 (410)
++++++++++++.|+||++.+++.++..++. ..++++.. ..++..+. ..+...++.++|+|||++|+|||||+.
T Consensus 35 ~~~~~ela~~~~~E~Gk~~~ea~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~ 110 (439)
T cd07081 35 EDARIDLAKLAVSETGMGRVEDKVIKNHFAAEYIYNVYKDE---KTCGVLTG-DENGGTLIIAEPIGVVASITPSTNPTS 110 (439)
T ss_pred HHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhcc---ccCceecC-CCCCceEEEEecceEEEEECCCcchHH
Confidence 4456778999999999999999887765554 23443322 11221121 123456889999999999999999999
Q ss_pred hhhhhccchhccCCeEEEecCCCcHHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHH
Q 015249 86 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 161 (410)
Q Consensus 86 ~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l----~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~ 161 (410)
..++++++||++||+||+|||+.+|.++..+.+++ .++|+|+|++|++++.+.+.++.|+.||+|+.|+||||+.
T Consensus 111 ~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~- 189 (439)
T cd07081 111 TVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA- 189 (439)
T ss_pred HHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH-
Confidence 99999999999999999999999999998888876 4789999999999987777899999999999999999998
Q ss_pred HHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcc
Q 015249 162 GKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 241 (410)
Q Consensus 162 ~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~ 241 (410)
+.+.++++++|+++|+|||+|+||++|||++.|++.+++++|.++||.|++.+|||||+++||+|+++|+++
T Consensus 190 ---v~~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~----- 261 (439)
T cd07081 190 ---VVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEVMRLFEGQ----- 261 (439)
T ss_pred ---HHHHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHc-----
Confidence 455667788999999999999999999999999999999999999999999999999999999999999997
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCc-c-cCCCCceecce---EeccCC--CCCcccccceecc
Q 015249 242 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR-R-HSLGMTFYEPT---VLSNVK--SEMLVSREEVFGP 314 (410)
Q Consensus 242 ~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~-~-~~~~~~~~~Pt---v~~~~~--~~~~~~~eE~fgP 314 (410)
+||+++.++.+++.++|+++.++|++++.|+. . ....|+|++|| ++.+++ ++|++++||+|||
T Consensus 262 ----------~gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGP 331 (439)
T cd07081 262 ----------GAYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSP 331 (439)
T ss_pred ----------CCccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHHHHcCCccCCCceEEEEecCCCCCCchhhhCccCc
Confidence 38999999999999999999999998754432 1 11247899998 998888 9999999999999
Q ss_pred eeeeeecCCHHHHHHHhhcC----CCCcEEEEecCC---HHHHHHHHhhcceeEEEECCCCC-C--CCCCCccCCCCC--
Q 015249 315 VAPLLCFKTEEEAIHMANDT----NAGLAAYIFTNN---LQRTWRVSEALEYGLVGVNEGLI-S--TEVAPFGGVKQS-- 382 (410)
Q Consensus 315 vl~v~~~~~~~eai~~~n~~----~~gl~~sv~s~d---~~~~~~~~~~~~~g~v~iN~~~~-~--~~~~pfGg~~~S-- 382 (410)
|++|++|+|+||||+++|++ +|||+++|||+| .++++++++++++|.|+||.++. . .-..-|||...+
T Consensus 332 Vl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~ 411 (439)
T cd07081 332 VLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTL 411 (439)
T ss_pred eEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhhCCceEEEEeCCccccccccccCCCCCeeEee
Confidence 99999999999999999965 799999999999 99999999999999999997763 1 223456555544
Q ss_pred CCCCCChH-----HHHHhhheeeEEEEe
Q 015249 383 GLGREGSK-----YGMDEFLEIKYVCLG 405 (410)
Q Consensus 383 G~g~~~g~-----~~l~~~~~~k~v~~~ 405 (410)
|.|..+|. -+.++|++.|+|.++
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (439)
T cd07081 412 GCGTWGGNSVSENVGPKHLVNLKTVALR 439 (439)
T ss_pred ecCCCCCCCcCCCCChHhhheeeeeecC
Confidence 33332222 246788888877653
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-68 Score=542.56 Aligned_cols=384 Identities=22% Similarity=0.253 Sum_probs=329.6
Q ss_pred HHHHHHHHHHHHHhhchHHHHHH-----HHHHHHHHHHHHHHHHHHHhCccccCCCCC------cceeEEeeeceEEEEE
Q 015249 9 KQKMLYLRLLMRLILGASSLLLR-----EVDYGAKFIEFYAEEAKRVYGEIIPATLPD------RRLFVLKQPVGVAGAI 77 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~-----ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~P~Gvv~~i 77 (410)
+++.++++++++|+||++.++.+ |++++++.++|+++....+.++.......+ .....+++|+||+++|
T Consensus 121 ~~~~ela~a~~~e~Gk~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI 200 (549)
T cd07127 121 ARSFEMAHAVMHTTGQAFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVI 200 (549)
T ss_pred hCHHHHHHHHHHHHCCCHHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEE
Confidence 34677799999999999988863 899999999999988877654322111111 1123478999999999
Q ss_pred cCCCcchhhhhhhccchhccCCeEEEecCCCcHHHH----HHHHHHHHHcCCCCCcEEEEeCC-chhHHhHHhcCCCccE
Q 015249 78 TPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA----LAAAELALQAGIPPGVVNVVMGN-APDIGDALLTSPQVRK 152 (410)
Q Consensus 78 ~p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~----~~l~~~l~~aglP~g~v~~v~g~-~~~~~~~l~~~~~v~~ 152 (410)
+|||||+++.+..+++||++||+||+|||+.+|+++ ..+.++|.++|+|+|+||+++++ +.+.+..|+.||+++.
T Consensus 201 ~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~ 280 (549)
T cd07127 201 GCSTFPTWNGYPGLFASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRI 280 (549)
T ss_pred eCcCChHHHHHHHHHHHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCE
Confidence 999999999999999999999999999999999876 45668999999999999999975 3678999999999999
Q ss_pred EEEeCcHHHHHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecc--------
Q 015249 153 ITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG-------- 224 (410)
Q Consensus 153 v~ftGs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~-------- 224 (410)
|.||||+.+|+.|.+.++ .+++++|+||||++||++|+|++.+++.+++++|.++||.|++++|||||++
T Consensus 281 I~FTGS~~~G~~i~~~a~--~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~ 358 (549)
T cd07127 281 IDFTGSNAFGDWLEANAR--QAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGR 358 (549)
T ss_pred EEEECCHHHHHHHHHHhc--cCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccch
Confidence 999999999999999886 4799999999999999999999999999999999999999999999999999
Q ss_pred -hHHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceecceEecc
Q 015249 225 -IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSN 299 (410)
Q Consensus 225 -~~~~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~----~~~~~~~Ptv~~~ 299 (410)
+||+|+++|+++++++ +|+|.+..+++||++++.+++++.+. +..|+ +++||.... +++++++|||+..
T Consensus 359 ~i~d~f~~~L~~~~~~l-~Gdp~~~~~~~Gpli~~~~~~ri~~a----~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~ 432 (549)
T cd07127 359 KSFDEVAADLAAAIDGL-LADPARAAALLGAIQSPDTLARIAEA----RQLGE-VLLASEAVAHPEFPDARVRTPLLLKL 432 (549)
T ss_pred hHHHHHHHHHHHHHHHh-cCCccccccccCCcCCHHHHHHHHHH----HhCCC-EEEcCCcCCCcCCCCceEEeCEEEEe
Confidence 8999999999999999 99999999999999999999998654 44565 777776432 2345679999988
Q ss_pred CCCCCcccccceecceeeeeecCCHHHHHHHhhcCC--C-CcEEEEecCCHHHHHHHHhhcc-e-eEEEECCCCCC--CC
Q 015249 300 VKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTN--A-GLAAYIFTNNLQRTWRVSEALE-Y-GLVGVNEGLIS--TE 372 (410)
Q Consensus 300 ~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~--~-gl~~sv~s~d~~~~~~~~~~~~-~-g~v~iN~~~~~--~~ 372 (410)
.+++|++++||+||||++|++|+|.+|+++++|++. + +|+++|||+|.+.++++.+++. + |.++||+.... .-
T Consensus 433 ~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q 512 (549)
T cd07127 433 DASDEAAYAEERFGPIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQ 512 (549)
T ss_pred CCCCCHHHcCCCcCceEEEEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEec
Confidence 889999999999999999999999999999999974 4 6999999999999999999944 4 49999954432 33
Q ss_pred CCCccCCCCCCCCCC-ChHHHHHhhheee
Q 015249 373 VAPFGGVKQSGLGRE-GSKYGMDEFLEIK 400 (410)
Q Consensus 373 ~~pfGg~~~SG~g~~-~g~~~l~~~~~~k 400 (410)
.+||||++.||.+.. +..+..-.|...+
T Consensus 513 ~~~Fg~~~~sg~n~~a~~~~~~~~fv~~r 541 (549)
T cd07127 513 SAAFSDFHGTGANPAANAALTDGAFVANR 541 (549)
T ss_pred CcCCCCCCCCCCCcccccccchhhhhhcc
Confidence 356999999999987 5555555665544
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-69 Score=542.72 Aligned_cols=369 Identities=20% Similarity=0.188 Sum_probs=313.0
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCc-cccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGE-IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
++++.++++++.+|+||++.+++. ..+++++......... .......+...+++++|+|||++|+|||||+..
T Consensus 72 ~~~~~ela~~~~~E~Gk~~~ea~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~GVV~~I~PwN~P~~~ 145 (465)
T PRK15398 72 LPHAEELAELAVEETGMGRVEDKI------AKNVAAAEKTPGVEDLTTEALTGDNGLTLIEYAPFGVIGAVTPSTNPTET 145 (465)
T ss_pred HHHHHHHHHHHHHHHCCCcHHHHH------HHHHHHHHHhccccccccCcccCCCceeEEEecccEEEEEeeCCCCchHH
Confidence 445667799999999999988763 2234444432111000 000111234567889999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL----QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 162 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~----~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~ 162 (410)
.++++++||++||+||+|||+.+|.++..+.+++. ++|+|+|+++++++.+.+.+..|++||+||.|.||||+.+|
T Consensus 146 ~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G 225 (465)
T PRK15398 146 IINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVV 225 (465)
T ss_pred HHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHH
Confidence 99999999999999999999999999999988875 69999999999998667788999999999999999999999
Q ss_pred HHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhccc
Q 015249 163 KKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 242 (410)
Q Consensus 163 ~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~ 242 (410)
+.|.+ ..+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++
T Consensus 226 ~~v~~----~~k~~~~elGGk~p~IV~~dADld~Aa~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~------ 295 (465)
T PRK15398 226 KAAMK----SGKKAIGAGAGNPPVVVDETADIEKAARDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKN------ 295 (465)
T ss_pred HHHHH----cCCceeeecCCCceEEEecCCCHHHHHHHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHc------
Confidence 99988 35899999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc---CCCCcee---cceEeccCCCCCcccccceeccee
Q 015249 243 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH---SLGMTFY---EPTVLSNVKSEMLVSREEVFGPVA 316 (410)
Q Consensus 243 g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~---~~~~~~~---~Ptv~~~~~~~~~~~~eE~fgPvl 316 (410)
..|++++.+++++.++++++..++++++.|+... ...|+++ +|||+.+++++|++++||+||||+
T Consensus 296 ---------~~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl 366 (465)
T PRK15398 296 ---------GAVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVL 366 (465)
T ss_pred ---------CCccCCHHHHHHHHHHHhhcccccchhhhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceE
Confidence 1378999999999999996543455777765421 1124554 489999999999999999999999
Q ss_pred eeeecCCHHHHHHHhhcCCCCc--EEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHH
Q 015249 317 PLLCFKTEEEAIHMANDTNAGL--AAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMD 394 (410)
Q Consensus 317 ~v~~~~~~~eai~~~n~~~~gl--~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~ 394 (410)
+|++|+|+|||++++|+++||| +++|||+|.++++++++++++|+|+||++.. +.+||||.|.|.+ .-+|+.| .
T Consensus 367 ~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~~G~V~iN~~~~--~~~p~gg~~~s~~-~~~~~~g-~ 442 (465)
T PRK15398 367 PVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQTSIFVKNGPSY--AGLGLGGEGFTTF-TIATPTG-E 442 (465)
T ss_pred EEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCCceEEEECCCCc--cccCcCCCCCcee-eecccCC-C
Confidence 9999999999999999999988 9999999999999999999999999998753 6799999999985 2247777 7
Q ss_pred hhheeeEEEEe
Q 015249 395 EFLEIKYVCLG 405 (410)
Q Consensus 395 ~~~~~k~v~~~ 405 (410)
..|..|+++.+
T Consensus 443 ~~~~~~~~~~~ 453 (465)
T PRK15398 443 GVTSARTFTRR 453 (465)
T ss_pred Cccchhhhhhh
Confidence 78888887665
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-68 Score=532.80 Aligned_cols=349 Identities=19% Similarity=0.214 Sum_probs=303.3
Q ss_pred HHHHHHHHHHHHHHhhchHH----HH--------HHHHHHHHHHHHHHHHHHHHHhCccccCC--CCCcceeEEeeeceE
Q 015249 8 RKQKMLYLRLLMRLILGASS----LL--------LREVDYGAKFIEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGV 73 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~----~a--------~~ei~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gv 73 (410)
++++.++++++..|+||+.. ++ ..|+..+++.+++++..++. .+...+.. ..+...+++++|+||
T Consensus 34 ~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGV 112 (406)
T cd07079 34 EANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQVAALPDP-VGEVLRGWTLPNGLQIEKVRVPLGV 112 (406)
T ss_pred HhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHHHhcCCC-CcccccceeccCccceeEEecceEE
Confidence 34556678888777777643 33 35999999999999877543 23322211 123456889999999
Q ss_pred EEEEcCCCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHH----HcCCCCCcEEEEeCCch-hHHhHHhcCC
Q 015249 74 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL----QAGIPPGVVNVVMGNAP-DIGDALLTSP 148 (410)
Q Consensus 74 v~~i~p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~----~aglP~g~v~~v~g~~~-~~~~~l~~~~ 148 (410)
|++|+|| +| ...++++++||++||+||+|||+.+|.++..+.+++. ++|+|+|++|++++.+. ..+..|..||
T Consensus 113 V~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~ 190 (406)
T cd07079 113 IGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQEALEEAGLPEDAVQLIPDTDREAVQELLKLDD 190 (406)
T ss_pred EEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHcCCC
Confidence 9999996 56 6788999999999999999999999999999998886 89999999999998544 5688899999
Q ss_pred CccEEEEeCcHHHHHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHH
Q 015249 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 228 (410)
Q Consensus 149 ~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~ 228 (410)
+++.|+||||+.+|+.|++.+ .+|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++|||||+++||+
T Consensus 191 ~v~~i~fTGS~~~G~~i~~~a---~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~ 266 (406)
T cd07079 191 YIDLIIPRGGAGLIRFVVENA---TIPVIKHGDGNCHVYVDESADLEMAVRIVVNAKTQRPS-VCNALETLLVHRDIAEE 266 (406)
T ss_pred CccEEEeCCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCCCHHHHHHHHHHcccCCCc-ccccceeEEEeHHHHHH
Confidence 999999999999999998776 69999999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccc
Q 015249 229 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSR 308 (410)
Q Consensus 229 f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~ 308 (410)
|+++|++++++. |++++.|+.. ..|++|| ++++|++++
T Consensus 267 f~~~l~~~~~~~----------------------------------ga~~~~g~~~----~~~~~pt----v~~d~~i~~ 304 (406)
T cd07079 267 FLPKLAEALREA----------------------------------GVELRGDEET----LAILPGA----KPATEEDWG 304 (406)
T ss_pred HHHHHHHHHHHC----------------------------------CCEEecCHHH----HHhcccc----cCCCcchhh
Confidence 999999987652 5665433221 1477888 688999999
Q ss_pred cceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCC----
Q 015249 309 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGL---- 384 (410)
Q Consensus 309 eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~---- 384 (410)
||+||||++|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|+|+||+++...+..||||.++||+
T Consensus 305 eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~ 384 (406)
T cd07079 305 TEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFLREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQK 384 (406)
T ss_pred hhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHHhCCeeEEEEeCCCcccCCCccccceeeeeecCC
Confidence 9999999999999999999999999999999999999999999999999999999999877666789999999998
Q ss_pred CCCChHHHHHhhheeeEEEEe
Q 015249 385 GREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 385 g~~~g~~~l~~~~~~k~v~~~ 405 (410)
|+++|.+++++||+.|+|+++
T Consensus 385 g~~~g~~~l~~~~~~k~i~~~ 405 (406)
T cd07079 385 LHARGPMGLEELTTYKYIVRG 405 (406)
T ss_pred CcCCCCcChHHhcEEEEEEeC
Confidence 899999999999999999875
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-67 Score=526.67 Aligned_cols=350 Identities=21% Similarity=0.251 Sum_probs=302.5
Q ss_pred HHHHHHHHHHHHHHhhchH----HHHH--------HHHHHHHHHHHHHHHHHHHHhCccccCC--CCCcceeEEeeeceE
Q 015249 8 RKQKMLYLRLLMRLILGAS----SLLL--------REVDYGAKFIEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGV 73 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~----~~a~--------~ei~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gv 73 (410)
++++.++++++.+|+||+. .++. .|+..+++.+++++.+++.. ++..+.. ..+...+++++|+||
T Consensus 40 ~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGV 118 (417)
T PRK00197 40 EANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEGLRQVAALPDPV-GEVLDGWTLPNGLRIGRVRVPLGV 118 (417)
T ss_pred HhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHHHHHHhhcCCCc-cccccceecCCCceEEEEecCceE
Confidence 4556677899998888774 3443 68999999999999877542 3332211 223457899999999
Q ss_pred EEEEcCCCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHH----HHcCCCCCcEEEEeCCc-hhHHhHHhcCC
Q 015249 74 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQAGIPPGVVNVVMGNA-PDIGDALLTSP 148 (410)
Q Consensus 74 v~~i~p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l----~~aglP~g~v~~v~g~~-~~~~~~l~~~~ 148 (410)
|++|+||| | ..+++++++||++||+||+|||+.+|.++..+.+++ .++|+|+|++|++++.+ .+.+..|..|+
T Consensus 119 v~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~ 196 (417)
T PRK00197 119 IGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRALVAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDG 196 (417)
T ss_pred EEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHHHHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCC
Confidence 99999986 4 678889999999999999999999999999988874 79999999999999644 44678888899
Q ss_pred CccEEEEeCcHHHHHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHH
Q 015249 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 228 (410)
Q Consensus 149 ~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~ 228 (410)
+++.|+||||+.+|+.+++.+ .+|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++|+|||+++||+
T Consensus 197 ~v~~V~fTGS~~~g~~i~~~a---~~~~~lELGGk~p~IV~~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~ 272 (417)
T PRK00197 197 YVDVIIPRGGAGLIRRVVENA---TVPVIEHGDGICHIYVDESADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEE 272 (417)
T ss_pred CccEEEecCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCCCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHH
Confidence 999999999999999998865 59999999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccc
Q 015249 229 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSR 308 (410)
Q Consensus 229 f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~ 308 (410)
|+++|++++++++++ ++ ++... .+ |+ |||+ +++|++++
T Consensus 273 f~~~l~~~~~~~~~~----------------------------------~~-~~~~~--~~-~~-PTi~---~~~~~i~~ 310 (417)
T PRK00197 273 FLPKLAEALAEAGVE----------------------------------LR-GDEAA--LA-LL-PDVV---PATEEDWD 310 (417)
T ss_pred HHHHHHHHHHHCCCe----------------------------------Ee-cCHHH--HH-hh-cccc---cCCcchhh
Confidence 999999999887532 11 11110 11 22 9998 46799999
Q ss_pred cceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCC---
Q 015249 309 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG--- 385 (410)
Q Consensus 309 eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g--- 385 (410)
||+||||++|++|+|.||||+++|+++|||+++|||+|.++++++++++++|+|+||+++...+..||||.+.||+|
T Consensus 311 eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~ 390 (417)
T PRK00197 311 TEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQK 390 (417)
T ss_pred hhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCccCCCCccccchhheeecCC
Confidence 99999999999999999999999999999999999999999999999999999999998776678899999999999
Q ss_pred -CCChHHHHHhhheeeEEEEec
Q 015249 386 -REGSKYGMDEFLEIKYVCLGD 406 (410)
Q Consensus 386 -~~~g~~~l~~~~~~k~v~~~~ 406 (410)
+++|.+++++||+.|+++++.
T Consensus 391 ~~~~g~~~l~~~~~~k~v~~~~ 412 (417)
T PRK00197 391 LHARGPMGLEELTTYKYIVLGD 412 (417)
T ss_pred CcCCCccchHhhcEEEEEEECC
Confidence 999999999999999998753
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-66 Score=546.55 Aligned_cols=345 Identities=18% Similarity=0.168 Sum_probs=302.6
Q ss_pred HHHHHHHHHH------HHHhh--chHHHH----HHHHHHHHHHHHHHHHHHHHHhCccccC--CCCCcceeEEeeeceEE
Q 015249 9 KQKMLYLRLL------MRLIL--GASSLL----LREVDYGAKFIEFYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVA 74 (410)
Q Consensus 9 ~~~~~~~~~~------~~e~g--~~~~~a----~~ei~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv 74 (410)
+++..+++++ ++|+| |++.++ ..|+..+++.++|++... ...++..+. ...+...++.++|+|||
T Consensus 331 ~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~~~~~a~~~-~~~g~~~~~~~~~~~~~~~~~r~PlGVV 409 (718)
T PLN02418 331 ANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAASIRQLADME-DPIGRVLKRTEVADGLVLEKTSCPLGVL 409 (718)
T ss_pred HhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHHHHHHhcCc-cccCccccccccCCCceEEEEEEeeeEE
Confidence 3344556664 77999 888876 469999999999999984 444443331 12344468899999999
Q ss_pred EEEcCCCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCc----EEEEeCCchhHHhHHhcCCCc
Q 015249 75 GAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGV----VNVVMGNAPDIGDALLTSPQV 150 (410)
Q Consensus 75 ~~i~p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~----v~~v~g~~~~~~~~l~~~~~v 150 (410)
++|+||| |+... +++++||++||+||+|||+.+|.++..+.+++.++ +|+|+ +|+++| +.+.+..|..||+|
T Consensus 410 ~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~~l~~eA-lP~gv~~~v~nvv~g-~~~~g~~L~~~~~v 485 (718)
T PLN02418 410 LIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILHKVITDA-IPKTVGGKLIGLVTS-RDEIPDLLKLDDVI 485 (718)
T ss_pred EEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHHHHHHHH-ccccCCcceEEEeCC-cHHHHHHHhhCCCC
Confidence 9999999 99998 99999999999999999999999999999999999 99996 999997 56789999999999
Q ss_pred cEEEEeCcHHHHHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHH
Q 015249 151 RKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 230 (410)
Q Consensus 151 ~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~ 230 (410)
++|+||||+.. +.+.++.+.+|+++|+|||||+||++|||++.|++.+++++|.| ||.|++.+|+|||+++||+
T Consensus 486 ~~V~FTGSt~~---i~~~aa~~~k~v~lELGGk~p~iV~~DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~-- 559 (718)
T PLN02418 486 DLVIPRGSNKL---VSQIKASTKIPVLGHADGICHVYVDKSADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN-- 559 (718)
T ss_pred CEEEEeCCHHH---HHHHHHhcCCCEEEeCCCcceEEEeCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEecccccc--
Confidence 99999999964 44555567899999999999999999999999999999999999 9999999999999999997
Q ss_pred HHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccc
Q 015249 231 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREE 310 (410)
Q Consensus 231 ~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE 310 (410)
| .+.++|++++++|+++ +||... .| ++. + ++|++++||
T Consensus 560 ----------------------G---------~~~~~i~~a~~~Ga~l-~Gg~~~--~g------~l~-~-~~~~i~~eE 597 (718)
T PLN02418 560 ----------------------G---------GLNDLLVALRSAGVTL-YGGPRA--SK------LLN-I-PEAQSFHHE 597 (718)
T ss_pred ----------------------c---------cHHHHHHHHHHCCCEE-ECCccc--cC------eeC-C-CCchhhhCC
Confidence 1 2578899999999999 677543 13 243 3 789999999
Q ss_pred eecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCC--CCCC
Q 015249 311 VFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGL--GREG 388 (410)
Q Consensus 311 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~--g~~~ 388 (410)
+|||+++|.+|+|.||||+++|+++|||+++|||+|.+++.++++++++|.||||+++...+..||||+|+||+ |+++
T Consensus 598 ~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~ 677 (718)
T PLN02418 598 YSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIH 677 (718)
T ss_pred cCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999877667789999999999 9874
Q ss_pred --hHHHHHhhheeeEEEEec
Q 015249 389 --SKYGMDEFLEIKYVCLGD 406 (410)
Q Consensus 389 --g~~~l~~~~~~k~v~~~~ 406 (410)
|++||++||+.|+|++..
T Consensus 678 ~~G~~gl~~~t~~K~v~~g~ 697 (718)
T PLN02418 678 ARGPVGVEGLLTTRWILRGN 697 (718)
T ss_pred CCCHHHHHHHhcEEEEEECC
Confidence 999999999999998863
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-67 Score=521.63 Aligned_cols=374 Identities=20% Similarity=0.250 Sum_probs=313.3
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHH-HHHHHHH-HHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLR-EVDYGAK-FIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLA 85 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~ 85 (410)
++++.++++++++|+||++.+++. |+..+++ .++|++.. +..+... ...+...+++++|+|||++|+|||||+.
T Consensus 35 ~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~g~~~--~~~~~~~~~~~~P~GVv~~I~pwN~P~~ 110 (436)
T cd07122 35 ADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTVGVIE--EDEEKGIVEIAEPVGVIAALIPSTNPTS 110 (436)
T ss_pred HHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cceeeec--cCCCCCeEEEeecccEEEEEeCCCCchH
Confidence 445667799999999999999986 8888887 78888863 2222211 1124557889999999999999999999
Q ss_pred hhhhhccchhccCCeEEEecCCCcHHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHH
Q 015249 86 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 161 (410)
Q Consensus 86 ~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l----~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~ 161 (410)
..++++++||++||+||+|||+.+|.++..+.+++ .++|+|+|++|++++.+.+.+..|++||+|+.|+||||+++
T Consensus 111 ~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v 190 (436)
T cd07122 111 TAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGM 190 (436)
T ss_pred HHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHH
Confidence 99999999999999999999999999998877775 58999999999999877778999999999999999999997
Q ss_pred HHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhc-
Q 015249 162 GKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL- 240 (410)
Q Consensus 162 ~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~- 240 (410)
++ .++++.+|+++|+||+||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++...+
T Consensus 191 ~~----~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~ 266 (436)
T cd07122 191 VK----AAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFL 266 (436)
T ss_pred HH----HHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhhccCCCCCCCCCEEEEechhHHHHHHHHHHhcceec
Confidence 54 3456789999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred ------ccCCC-CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceec
Q 015249 241 ------KVGDG-FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFG 313 (410)
Q Consensus 241 ------~~g~~-~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fg 313 (410)
++|++ .+.++.+||+++..+.+++..++..++.+|++++.++ +.+++++|++. +|.||
T Consensus 267 ~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~vl~~~--------------~~~v~~~~~~~-~E~FG 331 (436)
T cd07122 267 NEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTKVLVAE--------------ETGVGPEEPLS-REKLS 331 (436)
T ss_pred CHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCeEEEEe--------------cCCCCCCCcch-hcccC
Confidence 88888 4677889999999888888877766666666666444 45678889987 56799
Q ss_pred ceeeeeecCCHHHHHHHhhcC----CCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCC--------C
Q 015249 314 PVAPLLCFKTEEEAIHMANDT----NAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGV--------K 380 (410)
Q Consensus 314 Pvl~v~~~~~~~eai~~~n~~----~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~--------~ 380 (410)
||++|++|+|.||||+++|++ +|||+++|||+|.++++++++++++|+||||+++.+ .-+..+.|. +
T Consensus 332 PVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l~aG~V~IN~~~~~~~~g~~~~~~~~~~~~~~~ 411 (436)
T cd07122 332 PVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRMPVSRILVNTPSSLGGIGDTYNGLAPSLTLGCG 411 (436)
T ss_pred CeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhCCceEEEEeCCccccccCccCCCCCceeeeecc
Confidence 999999999999999999997 799999999999999999999999999999988751 111111111 1
Q ss_pred CCCCCCCChHHHHHhhheeeEEEE
Q 015249 381 QSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 381 ~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
..|.+...+.-..++|++.|+|.+
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~ 435 (436)
T cd07122 412 SWGGNSTSDNVGPKHLLNIKRVAY 435 (436)
T ss_pred ccCCCcCCCCCChHHhheeEeecc
Confidence 113333344566788888888764
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-65 Score=520.23 Aligned_cols=374 Identities=16% Similarity=0.174 Sum_probs=318.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLR-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
++++..+++++.+|+||+..+.+. +...+...+.+++... +..+. .. ...+...+..++|+|||++|+|||||+..
T Consensus 44 ~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~-~~-~~~~~~~~~~~~PlGVV~~I~P~n~P~~~ 120 (488)
T TIGR02518 44 YENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKDM-KTIGI-LS-EDKEKKVIEIAVPVGVVAGLIPSTNPTST 120 (488)
T ss_pred HhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhhC-cccce-ec-CCCCcceEEEEecceEEEEEcccCChHHH
Confidence 455667799999999999888664 2334545554444422 22222 11 12345678899999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHH----HHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALA----AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 162 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~----l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~ 162 (410)
..+++++||++||+||+|||+.+|.++.. +.+++.++|+|+|++|++++.+.+.+..|+.||+|+.|.||||+..+
T Consensus 121 ~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~ 200 (488)
T TIGR02518 121 AIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMV 200 (488)
T ss_pred HHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHH
Confidence 99999999999999999999999999987 55556899999999999998777889999999999999999999976
Q ss_pred HHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHH------
Q 015249 163 KKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA------ 236 (410)
Q Consensus 163 ~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~------ 236 (410)
+.+ +.+.+|+++|+|||+|+||++|||++.|++.+++++|+++||.|++.+|||||+++||+|+++|+++
T Consensus 201 ~~a----~~~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~ 276 (488)
T TIGR02518 201 KAA----YSSGTPAIGVGPGNGPAYIERTANVKKAVRDIIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLT 276 (488)
T ss_pred HHH----HHcCCCEEEEcCCCCeEEEeCCCCHHHHHHHHHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcC
Confidence 554 3467999999999999999999999999999999999999999999999999999999999999998
Q ss_pred -HhhcccCCC-CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecc
Q 015249 237 -VKNLKVGDG-FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGP 314 (410)
Q Consensus 237 -~~~~~~g~~-~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgP 314 (410)
.+.+++|+| .++++++||+++.++++++.++++.++.+|+++++||.. .+.+++++ ++|+|||
T Consensus 277 ~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~~gakll~gg~~--------------~v~~~~~~-~~E~fgP 341 (488)
T TIGR02518 277 AEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVPEDAKVLIGEQN--------------GVGNKNPY-SREKLTT 341 (488)
T ss_pred HHHHHhhcccccCCCCCcCcccccchHHHHHHHhccccCCCCEEEEeCCC--------------CCCCCCcc-ccCccCc
Confidence 899999996 678999999999999999999999999999999999842 24667776 7999999
Q ss_pred eeeeeecCCHHHHHHHhhc----CCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC---------CCCCCC--ccCC
Q 015249 315 VAPLLCFKTEEEAIHMAND----TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI---------STEVAP--FGGV 379 (410)
Q Consensus 315 vl~v~~~~~~~eai~~~n~----~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~---------~~~~~p--fGg~ 379 (410)
|++|++|+|+||||+++|+ .+|||+++|||+|.+.+++|++++++|+|+||++.. +.+.+. ||++
T Consensus 342 Vl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~ 421 (488)
T TIGR02518 342 ILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAV 421 (488)
T ss_pred eEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCcccccccccCCCcccccccccc
Confidence 9999999999999999887 689999999999999999999999999999996542 334333 4444
Q ss_pred CCCCCCCCChHHHHHhhheeeEEEEec
Q 015249 380 KQSGLGREGSKYGMDEFLEIKYVCLGD 406 (410)
Q Consensus 380 ~~SG~g~~~g~~~l~~~~~~k~v~~~~ 406 (410)
+.++++ .+-+++++++.|+|...-
T Consensus 422 ~g~st~---~~v~~~~l~~~k~v~~~~ 445 (488)
T TIGR02518 422 GGSSTS---DNITPENLINIRRVAYGV 445 (488)
T ss_pred CCCcCC---CCCCHHHhheeeEEEecc
Confidence 444443 399999999999987653
|
|
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-64 Score=494.24 Aligned_cols=336 Identities=49% Similarity=0.767 Sum_probs=315.3
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
.+++.+++++++.|+||++.+++.|+..+++.+++++...+...+........+...+++++|+|||++|+|||+|+...
T Consensus 30 ~~~~~~l~~~~~~e~Gk~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~ 109 (367)
T cd06534 30 EERREELAALETLETGKPIEEALGEVARAIDTFRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLA 109 (367)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCceeEEEEEeeeEEEEECCCchHHHHH
Confidence 45567789999999999999999999999999999999887766543333345677889999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++.+++||++||+||+|||+.+|.++..+.++|.++|+|+++++++++++++.+..|+.|++++.|.||||+++++.+.+
T Consensus 110 ~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~ 189 (367)
T cd06534 110 AWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGSTAVGKAIMK 189 (367)
T ss_pred HHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcCchhHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999976668899999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++.+|+++|+||+|++||++|+|++.+++.+++++|.++||.|+++++||||++++|+|+++|+
T Consensus 190 ~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s~~~v~v~~~~~~~f~~~l~------------- 256 (367)
T cd06534 190 AAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRLLVHESIYDEFVEKLV------------- 256 (367)
T ss_pred HHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHhhc-------------
Confidence 9998899999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ea 327 (410)
||+.++++++++++||+|||+++|++|++.+|+
T Consensus 257 -----------------------------------------------tl~~~~~~~~~~~~~E~fgPv~~v~~~~~~~ea 289 (367)
T cd06534 257 -----------------------------------------------TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEA 289 (367)
T ss_pred -----------------------------------------------eeeeCCCCCCccccCCccCceEEEEecCCHHHH
Confidence 566677888999999999999999999999999
Q ss_pred HHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 328 i~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
++++|++++||+++|||+|...++++++++++|+|+||+.+.. .+.+||||.+.||+|+++|++++++|++.|+|.
T Consensus 290 i~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgg~~~sG~g~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 290 IALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVV 366 (367)
T ss_pred HHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccCccCCCChHHHHHHhceEEEEe
Confidence 9999999999999999999999999999999999999998886 889999999999999999999999999999874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-64 Score=488.46 Aligned_cols=379 Identities=30% Similarity=0.450 Sum_probs=343.6
Q ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhhhh
Q 015249 11 KMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 90 (410)
Q Consensus 11 ~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~~~ 90 (410)
...+..++++|.||++..+..||.+++++||||+..++...++ ...+|+|.|+||+|||||+.++..+
T Consensus 189 m~~L~~L~~REAGKtl~naIAEVREAVDFlrYYA~~ar~~~g~------------~~~~~~G~vVcISPWNFPLAIFtGq 256 (769)
T COG4230 189 MPQLMGLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN------------LTHRPLGPVVCISPWNFPLAIFTGQ 256 (769)
T ss_pred HHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhcccCc------------cccCCCCcEEEECCCCchHHHHHhH
Confidence 3455889999999999999999999999999999988542211 3468999999999999999999999
Q ss_pred ccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHHhc
Q 015249 91 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 170 (410)
Q Consensus 91 ~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~ 170 (410)
++.||++||+|+-||.+++|+.+..-.++|.++|+|.+++|+++|++..++..|+.++++++|+||||+++++.|.+..+
T Consensus 257 iaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA 336 (769)
T COG4230 257 IAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLA 336 (769)
T ss_pred HHHHHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cc---cceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 171 GT---VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 171 ~~---~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
++ ..|++.|+||-|.|||+.+|--+.++..++.|+|..+||+|++.+.+++++++.|..++.|+-.+..+++|+|..
T Consensus 337 ~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~ 416 (769)
T COG4230 337 KRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDR 416 (769)
T ss_pred hcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccc
Confidence 74 568999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceecceEeccCCCCCcccccceecceeeeeecC--CH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TE 324 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~-~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~--~~ 324 (410)
-.+|+||+|+.+..+.+.++|+..+..|-.+..-....+ ..|.|+.||++.-. +..-++.|+||||+.|++|+ ++
T Consensus 417 l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El~--~~~eL~rEVFGPVLHVvRy~~~~l 494 (769)
T COG4230 417 LTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELE--NLDELQREVFGPVLHVVRYKRDEL 494 (769)
T ss_pred eeccccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEcC--CHHHHHHHhccceeEEEEecHHHH
Confidence 999999999999999999999998887755443322221 35899999999532 23346899999999999998 56
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCccCCCCCCCCCC-ChHHHHHhhheeeE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGRE-GSKYGMDEFLEIKY 401 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~--~~~~pfGg~~~SG~g~~-~g~~~l~~~~~~k~ 401 (410)
++.|+-+|.++|||+..|+|+-.+.+.++..++++|++|||..... -.-+||||.+.||+|.+ +|+.+|..|...+.
T Consensus 495 ~~vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~~p 574 (769)
T COG4230 495 DEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRLVSERP 574 (769)
T ss_pred HHHHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHHHHHHhcCC
Confidence 8999999999999999999999999999999999999999998763 35789999999999987 99999999997776
Q ss_pred EE
Q 015249 402 VC 403 (410)
Q Consensus 402 v~ 403 (410)
..
T Consensus 575 ~~ 576 (769)
T COG4230 575 WS 576 (769)
T ss_pred cC
Confidence 43
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-63 Score=538.76 Aligned_cols=375 Identities=20% Similarity=0.242 Sum_probs=321.7
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLR-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
.+++.++++++.+|+||++.+++. ++..+++.++++.. .++..+. .. ..++...+..++|+|||++|+|||||+..
T Consensus 48 ~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~~~-~~~~~g~-~~-~~~~~~~~~~~~P~GVv~~I~pwn~P~~~ 124 (862)
T PRK13805 48 LDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNSYK-DEKTVGV-IE-EDDEFGIIEIAEPVGVIAGITPTTNPTST 124 (862)
T ss_pred HHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHHhc-CCCcccc-cC-cCCCCCeEEEeecceEEEEEeCCCChhHH
Confidence 455677899999999999998885 45445555544432 1122221 11 11244567899999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 162 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l----~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~ 162 (410)
.++++++||++||+||+|||+.+|.++..+.+++ .++|+|+|++|++++.+.+.+..|+.|++||.|+||||+.++
T Consensus 125 ~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~ 204 (862)
T PRK13805 125 AIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV 204 (862)
T ss_pred HHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHHHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH
Confidence 9999999999999999999999999998888876 478999999999998777889999999999999999999965
Q ss_pred HHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhccc
Q 015249 163 KKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 242 (410)
Q Consensus 163 ~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~ 242 (410)
+ .++++.+|+++|+|||+|+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++
T Consensus 205 ~----~a~~~~~pv~~e~gGk~p~iV~~dADl~~Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~------ 274 (862)
T PRK13805 205 K----AAYSSGKPALGVGAGNVPAYIDKTADIKRAVNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASH------ 274 (862)
T ss_pred H----HHHhcCCCeEEECCCCCeEEEeCCCCHHHHHHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHh------
Confidence 4 445678999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeE-eeCCcccC---CCCceecceE------eccCCCCCccccccee
Q 015249 243 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKV-LLGGRRHS---LGMTFYEPTV------LSNVKSEMLVSREEVF 312 (410)
Q Consensus 243 g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~-~~gg~~~~---~~~~~~~Ptv------~~~~~~~~~~~~eE~f 312 (410)
.+|++++++++++.++++++...+++. ++|+.... ..|++++|++ +.++++++++++ |+|
T Consensus 275 ---------g~~l~~~~~~~~v~~~i~~a~~~~~~~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~f 344 (862)
T PRK13805 275 ---------GAYFLNKKELKKLEKFIFGKENGALNADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKL 344 (862)
T ss_pred ---------CCeeCCHHHHHHHHHHHhhccCCCcCccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-ccc
Confidence 268999999999999999876655543 44553211 2367889987 678899999887 789
Q ss_pred cceeeeeecCCHHHHHHHhhc----CCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCC----------CCCCCCCccC
Q 015249 313 GPVAPLLCFKTEEEAIHMAND----TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL----------ISTEVAPFGG 378 (410)
Q Consensus 313 gPvl~v~~~~~~~eai~~~n~----~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~----------~~~~~~pfGg 378 (410)
|||++|++|+|.||||+++|+ +++||+++|||+|.+.++++++++++|+|+||+++ .+.+.+|||+
T Consensus 345 gPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~ 424 (862)
T PRK13805 345 SPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC 424 (862)
T ss_pred CcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc
Confidence 999999999999999999988 48999999999999999999999999999999886 3578899997
Q ss_pred CCCCCCCCCChHHHHHhhheeeEEEEec
Q 015249 379 VKQSGLGREGSKYGMDEFLEIKYVCLGD 406 (410)
Q Consensus 379 ~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 406 (410)
+.||.|.++|+.|+++|++.|+|..+.
T Consensus 425 -G~~g~~~~~g~~g~~~~~~~k~v~~~~ 451 (862)
T PRK13805 425 -GSWGGNSVSENVGAKHLLNIKTVAKRR 451 (862)
T ss_pred -cCCCCCcCCCCCCHHHhheeeeeeecc
Confidence 999999999999999999999988653
|
|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-63 Score=495.97 Aligned_cols=344 Identities=17% Similarity=0.151 Sum_probs=306.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-----------HHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEE
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-----------REVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGA 76 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-----------~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~ 76 (410)
.+++.++++++.+|+||++.++. .|+..+++.+++++....+..++..+. ....+++++|+|||++
T Consensus 30 ~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~P~Gvv~~ 106 (397)
T cd07077 30 YDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASVGHIQDVLLPD---NGETYVRAFPIGVTMH 106 (397)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhcCcccceEecC---CCceEEEEecceEEEE
Confidence 44566789999999999965433 489999999999987655544332221 3457899999999999
Q ss_pred EcCCCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHc---CCCCCcEEEEeCCchhHHhHHhcCCCccEE
Q 015249 77 ITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA---GIPPGVVNVVMGNAPDIGDALLTSPQVRKI 153 (410)
Q Consensus 77 i~p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~a---glP~g~v~~v~g~~~~~~~~l~~~~~v~~v 153 (410)
|+|||||+. .++++++||++||+||+|||+.+|.++..+.+++.++ |+|+++++++++.+.+.+..|+.|+++|.|
T Consensus 107 i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v 185 (397)
T cd07077 107 ILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLI 185 (397)
T ss_pred EeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcCCCCceEEEecCCCHHHHHHHHcCCCCCEE
Confidence 999999999 9999999999999999999999999999999999887 999999999998667789999999999999
Q ss_pred EEeCcHHHHHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHH
Q 015249 154 TFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 233 (410)
Q Consensus 154 ~ftGs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L 233 (410)
+||||+.+++.+.+.++ .+|+..|+||++++||++|+|++.|++.+++++|.| ||.|+++++||||++++|+|+++|
T Consensus 186 ~ftGs~~~~~~v~~~~~--~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l 262 (397)
T cd07077 186 VATGGRDAVDAAVKHSP--HIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFD-QNACASEQNLYVVDDVLDPLYEEF 262 (397)
T ss_pred EecCCHHHHHHHHHcCC--CCceEEecCCcceEEEcCCCCHHHHHHHHHHhhccC-CccCCCCeEEEEehhhhHHHHHHH
Confidence 99999999999988774 689999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceec
Q 015249 234 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFG 313 (410)
Q Consensus 234 ~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fg 313 (410)
+++++. .|++++.||. ++|+.|| +++++.+||+||
T Consensus 263 ~~~~~~----------------------------------~G~~~~~g~~-----~~~~~pt------~~~~~~~~E~Fg 297 (397)
T cd07077 263 KLKLVV----------------------------------EGLKVPQETK-----PLSKETT------PSFDDEALESMT 297 (397)
T ss_pred HHHHHh----------------------------------cCcCcCCCce-----eeEEecc------CCCChhhhhhhC
Confidence 998654 4777776663 3577776 788899999999
Q ss_pred ceeeeeecCCHH----HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCC--CCCCccCCC--CCCCC
Q 015249 314 PVAPLLCFKTEE----EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVK--QSGLG 385 (410)
Q Consensus 314 Pvl~v~~~~~~~----eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~--~~~pfGg~~--~SG~g 385 (410)
||++|++|+|.+ +|++++|+++|||+++|||+|.+.++++++++++|.|+||+..... ..+||||.+ .||+|
T Consensus 298 Pvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g 377 (397)
T cd07077 298 PLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKKGRGAFAGKGVERIVTSGMN 377 (397)
T ss_pred ceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEEEEEEeCCccCCCccccCCCcceEEEcccc
Confidence 999999999996 6667889999999999999999999999999999999999887643 678999999 89999
Q ss_pred CCCh-HHHHHhhheeeEEE
Q 015249 386 REGS-KYGMDEFLEIKYVC 403 (410)
Q Consensus 386 ~~~g-~~~l~~~~~~k~v~ 403 (410)
+++| ..++++|++.|+|+
T Consensus 378 ~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 378 NIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred CCCCCCCChHHhcceeEee
Confidence 9999 99999999999985
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-62 Score=516.32 Aligned_cols=338 Identities=15% Similarity=0.143 Sum_probs=290.0
Q ss_pred HHHHHhhchHHHHHH----------------HHHHHHHHHHHHHHHHHHHhCccccC--CCCCcceeEEeeeceEEEEEc
Q 015249 17 LLMRLILGASSLLLR----------------EVDYGAKFIEFYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVAGAIT 78 (410)
Q Consensus 17 ~~~~e~g~~~~~a~~----------------ei~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~ 78 (410)
.+..++||++.+++. |+..+++.+++++.. .+..++..+. ...+...+.+++|+|||++|+
T Consensus 327 ei~~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~~~~l~~~a~~-~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 405 (715)
T TIGR01092 327 EILAENKKDVAAAQGAGYAASLVARLSMSPSKISSLAISLRQLAAM-EDPIGRVLKRTRIADNLILEKTSVPIGVLLIVF 405 (715)
T ss_pred HHHHHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHHHHHHHHHhcC-CCcccccccccccCCCceeEEEEeeceEEEEEe
Confidence 345789999988876 488899999999874 3333332211 112334568899999999999
Q ss_pred CCCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCC----cEEEEeCCchhHHhHHhcCCCccEEE
Q 015249 79 PWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPG----VVNVVMGNAPDIGDALLTSPQVRKIT 154 (410)
Q Consensus 79 p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g----~v~~v~g~~~~~~~~l~~~~~v~~v~ 154 (410)
||| |+.. ++++++||++||+||+|||+.+|.++..+.+++.++ +|+| +++++++ +++.+..|..|+++|.|+
T Consensus 406 PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~~l~~l~~~a-lp~g~~~~~~~~v~~-~~~~~~~l~~~~~vd~I~ 481 (715)
T TIGR01092 406 ESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNAILHKVITEA-IPIHVGKKLIGLVTS-REEIPDLLKLDDVIDLVI 481 (715)
T ss_pred CCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHHHHHHHHHHH-cCCCCCCcEEEEeCC-hHHHHHHHhcCCCccEEE
Confidence 999 9988 689999999999999999999999999999999999 9987 6899985 567788899999999999
Q ss_pred EeCcHHHHHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHH
Q 015249 155 FTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 234 (410)
Q Consensus 155 ftGs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~ 234 (410)
||||+.+|+.|++.++ +|+++|+|||||+||++|||++.|++.+..+.|.+ ||.|++++|||||++++|+
T Consensus 482 fTGS~~vG~~i~~~A~---~pv~lElgGk~p~iV~~dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~------ 551 (715)
T TIGR01092 482 PRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDKSASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN------ 551 (715)
T ss_pred EcCCHHHHHHHHHhCC---CCEEEEcCCcceEEECCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc------
Confidence 9999999999998874 99999999999999999999999987777776655 9999999999999999985
Q ss_pred HHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecc
Q 015249 235 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGP 314 (410)
Q Consensus 235 ~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgP 314 (410)
| .+.+++++++++|++++ ||... . .|+. ..++++++++||+|||
T Consensus 552 -------------------~--------~~~~~v~~~~~~Ga~l~-Gg~~~--~-~~~~-----~~~~~~~i~~eE~FGP 595 (715)
T TIGR01092 552 -------------------G--------LLDDLIDMLRTEGVTIH-GGPRF--A-AYLT-----FNISETKSFRTEYSSL 595 (715)
T ss_pred -------------------h--------hHHHHHHHHHHCCCEEE-CCcch--h-heec-----cCCCCchhhhccccCc
Confidence 0 25567777778899985 77543 1 2332 1356899999999999
Q ss_pred eeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCC----CChH
Q 015249 315 VAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGR----EGSK 390 (410)
Q Consensus 315 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~----~~g~ 390 (410)
|++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+||+++...+.+||||.|+||+|+ .+|+
T Consensus 596 vl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~~~i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~ 675 (715)
T TIGR01092 596 ACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQHVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGP 675 (715)
T ss_pred eEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCcCccccccccCCCCCCCh
Confidence 999999999999999999999999999999999999999999999999999887666788999999999995 4899
Q ss_pred HHHHhhheeeEEEEe
Q 015249 391 YGMDEFLEIKYVCLG 405 (410)
Q Consensus 391 ~~l~~~~~~k~v~~~ 405 (410)
+++++||+.|+|.+.
T Consensus 676 ~~l~~~~~~k~v~~g 690 (715)
T TIGR01092 676 VGVEGLLTTRWLLRG 690 (715)
T ss_pred hHHHHhceEEEEEEC
Confidence 999999999999875
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-63 Score=488.63 Aligned_cols=346 Identities=18% Similarity=0.136 Sum_probs=290.8
Q ss_pred HHHHHHHH------HHHHhhchH------HHHHHHHHHHHHHHHHHHHHHHHHhCccccC--CCCCcceeEEeeeceEEE
Q 015249 10 QKMLYLRL------LMRLILGAS------SLLLREVDYGAKFIEFYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVAG 75 (410)
Q Consensus 10 ~~~~~~~~------~~~e~g~~~------~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~ 75 (410)
++.+++++ +++|+|||. .+++.|+..+++.++|+++.++.. ++..+. ..++...+++++|+|||+
T Consensus 30 ~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~ 108 (398)
T TIGR00407 30 QAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELADPV-GKVIDGRELDSGLTLERVRVPLGVLG 108 (398)
T ss_pred ChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCCCC-cccccceecCCCceEEEEEeCcEEEE
Confidence 33444666 899999993 346789999999999999888653 443332 124556788999999999
Q ss_pred EEcCCCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHH----HHHcCCCCCcEEEEeCCc-hhHHhHHhcCCCc
Q 015249 76 AITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL----ALQAGIPPGVVNVVMGNA-PDIGDALLTSPQV 150 (410)
Q Consensus 76 ~i~p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~----l~~aglP~g~v~~v~g~~-~~~~~~l~~~~~v 150 (410)
+|+||| | ...++++++||++||+||+|||+.+|.++..+.++ |.++|+|+|++|++++.+ .+.+..|..||+|
T Consensus 109 ~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v 186 (398)
T TIGR00407 109 VIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQTGLPVGAVQLIETPSRELVSELLDLDEYI 186 (398)
T ss_pred EEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHHcCCChhHEEEecCCCHHHHHHHHhCCCCe
Confidence 999997 6 56888999999999999999999999999999999 569999999999999744 4578889999999
Q ss_pred cEEEEeCcHHHHHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHH
Q 015249 151 RKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 230 (410)
Q Consensus 151 ~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~ 230 (410)
++|+||||+.+++.+.+.. .+|+++|+|||||+||++|||++.|++.+++++|.+ ||.|++++|+|||+++||+|+
T Consensus 187 ~~v~fTGs~~vg~~~~~~~---~~~~~~e~gGk~p~iV~~dADl~~Aa~~iv~~~~~~-GQ~C~a~~rv~V~~~v~d~f~ 262 (398)
T TIGR00407 187 DLLIPRGGNGLVRLIKQTS---TIPVLGHGDGICHIYLDESADLIKAIKVIVNAKTQR-PSTCNAIETLLVNKAIAREFL 262 (398)
T ss_pred eEEEecCCHHHHHHHHHhC---CCCEEEecCCcceEEEeCCCCHHHHHHHHHhhhcCC-CCcccccceEEEeHHHHHHHH
Confidence 9999999999999987753 479999999999999999999999999999999965 999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccc
Q 015249 231 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREE 310 (410)
Q Consensus 231 ~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE 310 (410)
++|+++++++.+ .+++ .+.+.+++. .| | ||++ ..++++++||
T Consensus 263 ~~l~~~~~~~~~--------~~~~------~~~i~~~v~----~g------~-----------~tv~---~~~~~i~~eE 304 (398)
T TIGR00407 263 PVLENQLLEKGV--------TIHA------DAYALKLLE----LG------P-----------ATEA---IVCKTDFDKE 304 (398)
T ss_pred HHHHHHHHhcCC--------EEec------CHHHHHHHh----cc------C-----------cccc---ccccccccch
Confidence 999999987642 1221 133333332 11 1 3444 2237899999
Q ss_pred eecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCC----CC
Q 015249 311 VFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGL----GR 386 (410)
Q Consensus 311 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~----g~ 386 (410)
+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++++++|.|+||+++...+..|||=-.+-|+ ..
T Consensus 305 ~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~v~iN~~~~~~~~~pfG~~~~~~~~~~~~~ 384 (398)
T TIGR00407 305 FLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVYHNASTRFTDGFRFGFGAEVGISTQKLH 384 (398)
T ss_pred hhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCCcCCCcccccceeeEEecCCCc
Confidence 99999999999999999999999999999999999999999999999999999999988777889984444443 45
Q ss_pred CChHHHHHhhheee
Q 015249 387 EGSKYGMDEFLEIK 400 (410)
Q Consensus 387 ~~g~~~l~~~~~~k 400 (410)
.+|+.+++.||+.|
T Consensus 385 ~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 385 ARGPMGLEALTSYK 398 (398)
T ss_pred CCCCcCHHHhcCCC
Confidence 59999999999876
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-63 Score=465.14 Aligned_cols=395 Identities=24% Similarity=0.366 Sum_probs=359.8
Q ss_pred HHHHHHHHHHHHHHHhhchHHHHHHH-HHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeec-eEEEEEcCCCcch
Q 015249 7 ERKQKMLYLRLLMRLILGASSLLLRE-VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV-GVAGAITPWNFPL 84 (410)
Q Consensus 7 ~~~~~~~~~~~~~~e~g~~~~~a~~e-i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-Gvv~~i~p~n~p~ 84 (410)
...++.++....+...||+..+|+.+ +.+.++++|+.+..+.++...+.....++..+...++|+ |.|+.|+|+||..
T Consensus 132 stkyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnftA 211 (561)
T KOG2455|consen 132 STKYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFTA 211 (561)
T ss_pred cchHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecccceee
Confidence 34667777888888899999998876 778899999999999888776655445677777888888 9999999999998
Q ss_pred hhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHH
Q 015249 85 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 164 (410)
Q Consensus 85 ~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~ 164 (410)
.......+||| |||+|+||||..+.++...+.++|+|||||+|++|+++++++..++.+.++|++.++.||||..+-+.
T Consensus 212 I~gnLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~ 290 (561)
T KOG2455|consen 212 IGGNLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKH 290 (561)
T ss_pred eccccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHH
Confidence 88888888888 79999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccc------cceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHh
Q 015249 165 LMAGAAGT------VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVK 238 (410)
Q Consensus 165 i~~~~~~~------~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~ 238 (410)
+.+..+++ ..+++.|+||+|.-+|+++||++.++...++++|..+||.|++.+|+||++++++.+.+.|.+.-+
T Consensus 291 lwk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~ 370 (561)
T KOG2455|consen 291 LWKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHS 370 (561)
T ss_pred HHHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHh
Confidence 88877665 468999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCC-CCCCccccccCCHHHHHHHHHHHHHHHH-CCCeEeeCCcccCCCCceecceEeccCCCCCcccccceeccee
Q 015249 239 NLKVGDG-FGEGVVQGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVA 316 (410)
Q Consensus 239 ~~~~g~~-~~~~~~~gp~~~~~~~~~~~~~i~~~~~-~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl 316 (410)
++++|+| .|.++.+||+++...++|++++|+.++. ...++++||..++..|+|+.|||+...+|.++++.||+||||+
T Consensus 371 q~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvL 450 (561)
T KOG2455|consen 371 QLKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVL 450 (561)
T ss_pred hcccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCcee
Confidence 9999998 7889999999999999999999999885 3468999999987779999999999999999999999999999
Q ss_pred eeeecCC--HHHHHHHh-hcCCCCcEEEEecCCHHHHHHHHhhcc--eeEEEECCCCCC--CCCCCccCCCCCCCCCC-C
Q 015249 317 PLLCFKT--EEEAIHMA-NDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLIS--TEVAPFGGVKQSGLGRE-G 388 (410)
Q Consensus 317 ~v~~~~~--~~eai~~~-n~~~~gl~~sv~s~d~~~~~~~~~~~~--~g~v~iN~~~~~--~~~~pfGg~~~SG~g~~-~ 388 (410)
+|+.|+| .+|+++++ |.++|+|+.+||+.|.+.+.+..++++ +|+.|||+.++. -...||||.+.||+... |
T Consensus 451 sVyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaG 530 (561)
T KOG2455|consen 451 SVYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAG 530 (561)
T ss_pred EEEEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCCCCC
Confidence 9999997 47999998 568999999999999999999999887 899999998774 36799999999999977 9
Q ss_pred hHHHHHhhheeeEE
Q 015249 389 SKYGMDEFLEIKYV 402 (410)
Q Consensus 389 g~~~l~~~~~~k~v 402 (410)
|++.+..|+..++|
T Consensus 531 gp~~l~RwtSp~~i 544 (561)
T KOG2455|consen 531 GPHYLLRWTSPLSI 544 (561)
T ss_pred CceEEEeecCcchh
Confidence 99999999888754
|
|
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-61 Score=458.36 Aligned_cols=370 Identities=35% Similarity=0.585 Sum_probs=333.1
Q ss_pred HHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCC--C-CCcceeEEeeeceEEEEEcCCCcchhhhhhh
Q 015249 15 LRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPAT--L-PDRRLFVLKQPVGVAGAITPWNFPLAMITRK 90 (410)
Q Consensus 15 ~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~~~ 90 (410)
+..-+.+.|.-+..|. .-+...++.+|||++|.+++++.+.|.. . ....+++.++|+|||.+|.|||||+..+.|+
T Consensus 504 at~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlswk 583 (881)
T KOG2452|consen 504 ATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWK 583 (881)
T ss_pred hhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHHH
Confidence 4444444454443333 3566678999999999999999887653 2 2345678999999999999999999999999
Q ss_pred ccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHHhc
Q 015249 91 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 170 (410)
Q Consensus 91 ~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~ 170 (410)
.+.+|++ ...++.+- .|++|+++|.++-++..|..||+++.+-||||++.|+.|+..++
T Consensus 584 ~aaclaa-----------------~~~k~~e~----sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sca 642 (881)
T KOG2452|consen 584 TAACLAA-----------------QVLKFAEL----TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCA 642 (881)
T ss_pred HHHHHHH-----------------HHhhhhhh----cceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHHh
Confidence 9888752 11222221 48899999999999999999999999999999999999999988
Q ss_pred c-ccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCCCC
Q 015249 171 G-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 249 (410)
Q Consensus 171 ~-~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~ 249 (410)
. +.|++.+|+||++|+|++.|+|+++|+..-..+.|++-|..|++..|+||.+++.|+|+.+++++++++++|+|+|.+
T Consensus 643 ~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr~ 722 (881)
T KOG2452|consen 643 ISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRD 722 (881)
T ss_pred hcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCccccc
Confidence 5 578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC--HHHH
Q 015249 250 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT--EEEA 327 (410)
Q Consensus 250 ~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~--~~ea 327 (410)
++.||.-+..+..++.++.+.+++.||++.+||++.+..|.|++|||+++++.+|.+..||-||||+.|.+|+| .|+.
T Consensus 723 t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~v 802 (881)
T KOG2452|consen 723 TDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAV 802 (881)
T ss_pred ccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHHHH
Confidence 99999999999999999999999999999999998876789999999999999999999999999999999985 5799
Q ss_pred HHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 328 i~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
+..+|++.+||++.|||+|...+.+++..+.+|+|+||+..-.+...||||+|+||+|...|.++|.+|.+.|||++.
T Consensus 803 l~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgkd~ge~alneyl~~ktit~e 880 (881)
T KOG2452|consen 803 LSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTVTFE 880 (881)
T ss_pred HhhccccccccccceeecccchhhhhhhhhccceEEEeeccccccccCCCCccccccccchhHHHHhhheeeEEEEee
Confidence 999999999999999999999999999999999999999888788999999999999999999999999999999874
|
|
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-61 Score=437.84 Aligned_cols=396 Identities=31% Similarity=0.489 Sum_probs=370.5
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
|..-.-+.++++.|+||-+.+..+|+++-++.++|..++.+.+.+...|...+++-....|.|+|+|.+|+.+|||....
T Consensus 91 r~klq~lg~lvslemgkilaegvgevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavy 170 (507)
T KOG2453|consen 91 RTKLQNLGKLVSLEMGKILAEGVGEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVY 170 (507)
T ss_pred HHHHHHHhhhhhhhhhhHhhhcchhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceee
Confidence 34445568899999999999999999999999999999999999998888888888888999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHH----HHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALA----AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~----l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
-|.-..||.+||+|+|||++.+|+++.. +.+.|.+-.+|.+......| +.+.++++..+.++..+.||||+..++
T Consensus 171 gwnnaiaMv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG-~aDigrAaakdgRvnlvsftGssQvgK 249 (507)
T KOG2453|consen 171 GWNNAIAMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVNLVSFTGSSQVGK 249 (507)
T ss_pred ccCchhhhhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc-chhhhhhccccCceeecccccchhhhh
Confidence 9999999999999999999999987654 55667777899999999998 688999999999999999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
.+.+...++..+..+|+||+|++||.+|||+..++...++++...+||+|+..+|+++|+++||+.+++|+...+++++|
T Consensus 250 svgq~vqarfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ig 329 (507)
T KOG2453|consen 250 SVGQQVQARFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIG 329 (507)
T ss_pred HHHHHHHHHhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecC
Confidence 99998888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+|+|+++-+||+-+++...+...-++++++.|.++..||...+.+|+|++|||++ ...|.++..+|.|.||++|.+|++
T Consensus 330 npld~ntl~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~ 408 (507)
T KOG2453|consen 330 NPLDSNTLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFST 408 (507)
T ss_pred CcCCCCceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccc
Confidence 9999999999999999999999999999999999999999876678999999997 889999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHh--hcceeEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheee
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE--ALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~--~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k 400 (410)
++||+++-|+.+.||+.||||+|...+.+... .-++|.|.||-++.. .-+-.|||-|.+|-|++.|.++++.|+++.
T Consensus 409 ~eea~ainnev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tgggresgsdswkqymrrs 488 (507)
T KOG2453|consen 409 LEEAIAINNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWKQYMRRS 488 (507)
T ss_pred hhhhheeccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCCCcccCchHHHHHHhhc
Confidence 99999999999999999999999999998886 466999999988873 456789999999999999999999999999
Q ss_pred EEEEe
Q 015249 401 YVCLG 405 (410)
Q Consensus 401 ~v~~~ 405 (410)
|.+|+
T Consensus 489 tctin 493 (507)
T KOG2453|consen 489 TCTIN 493 (507)
T ss_pred eeeee
Confidence 98886
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=272.18 Aligned_cols=321 Identities=17% Similarity=0.144 Sum_probs=232.4
Q ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHHHHHH--HHHHHHHHHhC--ccccCCCC-CcceeEEeeeceEEEEEcCCCcchh
Q 015249 11 KMLYLRLLMRLILGASSLLLREVDYGAKFIE--FYAEEAKRVYG--EIIPATLP-DRRLFVLKQPVGVAGAITPWNFPLA 85 (410)
Q Consensus 11 ~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~--~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~P~Gvv~~i~p~n~p~~ 85 (410)
+..+.+.+...+|.+....+.++......++ ..........+ ..+..+.+ +...++.++|+|+|++|+|||+|+
T Consensus 48 r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r~~l~~~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~- 126 (422)
T cd07080 48 RQQAERLLPTVTGYSEEMLREGLKRLMALFRRENLERILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPL- 126 (422)
T ss_pred HHHHHHhhhhccCCCHHHHHHHHHHHHHHcCHHHHHHHHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCccc-
Confidence 3444556666677776666666655555553 11121111111 11111222 456688999999999999999999
Q ss_pred hhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCC----CcEEEEe--CCchhHHhHHhcCCCccEEEEeCcH
Q 015249 86 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPP----GVVNVVM--GNAPDIGDALLTSPQVRKITFTGST 159 (410)
Q Consensus 86 ~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~----g~v~~v~--g~~~~~~~~l~~~~~v~~v~ftGs~ 159 (410)
..++.+++||++||++|+|||+.+|.++..+.++|.++ +|+ +.++++. |.+.+.+..|+.++ |.|+||||+
T Consensus 127 l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~~~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~ 203 (422)
T cd07080 127 LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLADV-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGE 203 (422)
T ss_pred cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHHhc-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCH
Confidence 78999999999999999999999999999999999999 787 8888884 65556888899887 899999999
Q ss_pred HHHHHHHHHhccccceeeeeccCC-CcEEeccCC----CHHHHHHHHHHHHHhccCCccccCCeEEEecch---HHHHHH
Q 015249 160 AVGKKLMAGAAGTVKKVSLELGGN-APCIVFDDA----DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI---YEKFAD 231 (410)
Q Consensus 160 ~~~~~i~~~~~~~~~~~~~e~gg~-~~~iV~~~a----dl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~---~~~f~~ 231 (410)
++++.|++.++.+ +.++|+||| +++|+++++ |++.+++.++++.+.++||.|.++++|||++++ +++|.+
T Consensus 204 ~~~~~i~~~a~~~--~~~Le~Ggk~s~~vi~~~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~ 281 (422)
T cd07080 204 EAVKAIRSLLPPG--CRLIDFGPKYSFAVIDREALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAE 281 (422)
T ss_pred HHHHHHHHhCCCC--CeeeecCCceeEEEecHHhhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHH
Confidence 9999999988755 469999999 555666668 999999999999999999999999999999999 999999
Q ss_pred HHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccce
Q 015249 232 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEV 311 (410)
Q Consensus 232 ~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~ 311 (410)
+|.++++++.-..|.. +. +.+...++...-..+...+.+....+. -.-+|+...+.. +. ...
T Consensus 282 ~l~~~l~~~~~~~p~~------~~-~~~~~~~~~~~r~~~~~~~~~~~~~~~--------~~~~v~~~~~~~--~~-~~~ 343 (422)
T cd07080 282 ALAAALERLPRRYPAL------SL-SAAESAKIARARLEAEFYELKGGVSRD--------LGWTVIISDEIG--LE-ASP 343 (422)
T ss_pred HHHHHHHHHHHhCCCC------CC-CHHHHHHHHHHHHHHHHHHHhcCCCCC--------CCeEEEEeCCCC--cc-CCC
Confidence 9999999875444321 11 344444444433333222222211111 112444332222 11 134
Q ss_pred ecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcc
Q 015249 312 FGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE 358 (410)
Q Consensus 312 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~ 358 (410)
.+=.+.|+++++.+|++..++. +--|++++..+.+. .++++++.
T Consensus 344 ~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~~-~~~~~~l~ 387 (422)
T cd07080 344 LNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAEL-AELADALA 387 (422)
T ss_pred CcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhhH-HHHHHHHH
Confidence 4567889999999999999986 66699999988777 77777766
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=259.65 Aligned_cols=328 Identities=19% Similarity=0.226 Sum_probs=263.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCcccc-CCCCCcceeEEeeeceEEEEEcCCCcchhhhhhhccchhccCCeEEEecCCCc
Q 015249 31 REVDYGAKFIEFYAEEAKRVYGEIIP-ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 109 (410)
Q Consensus 31 ~ei~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~ 109 (410)
..++.+++-++..+.+++++-..... ....|.+.+..|.|+||+++|.-. .| ..++.....+|.+||+||||.+..+
T Consensus 74 ~Ri~~ma~gl~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvIYEs-RP-nVtvdaaaLclKsGNAvILRGGsea 151 (417)
T COG0014 74 SRIEAMADGLRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVIYES-RP-NVTVDAAALCLKSGNAVILRGGSEA 151 (417)
T ss_pred HHHHHHHHHHHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEEEec-CC-ccHHHHHHHHHhcCCEEEEeCcHHH
Confidence 35667777788888888764332221 123577888899999999999652 33 4566677789999999999999999
Q ss_pred HHHHHHHHHH----HHHcCCCCCcEEEEeCCchh-HHhHHhcCCCccEEEEeCcHHHHHHHHHHhccccceeeeeccCCC
Q 015249 110 PLTALAAAEL----ALQAGIPPGVVNVVMGNAPD-IGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNA 184 (410)
Q Consensus 110 ~~~~~~l~~~----l~~aglP~g~v~~v~g~~~~-~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~gg~~ 184 (410)
..+...+.++ |.++|+|.+.||+++...++ +.+.|..+..||.|.-.||..--+.+.+.+ ..||+-..-|++
T Consensus 152 ~~Sn~ai~~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a---~vPVi~~~~G~C 228 (417)
T COG0014 152 IHSNAAIVEVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENA---TVPVIEHGVGNC 228 (417)
T ss_pred hhhHHHHHHHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCC---cCCEEecCcceE
Confidence 9888777665 67889999999999965444 455556677899999999999888877765 256655555999
Q ss_pred cEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHH
Q 015249 185 PCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 264 (410)
Q Consensus 185 ~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~ 264 (410)
.++|+.+||+|.|.+-++.++..+.+ .|++.+.++||+.+.++|+..|.+.+...
T Consensus 229 Hiyvd~~ADld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~------------------------ 283 (417)
T COG0014 229 HIYVDESADLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQEA------------------------ 283 (417)
T ss_pred EEEecccCCHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhc------------------------
Confidence 99999999999999999999999987 89999999999999999999999886632
Q ss_pred HHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEec
Q 015249 265 ETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 344 (410)
Q Consensus 265 ~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s 344 (410)
|.++.+...... +-|..- .+....-+..|...+++.|..+++.+|||+.+|..+.+|+-+|.|
T Consensus 284 ----------gvelr~d~~~~~-----~~~~~~--~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiT 346 (417)
T COG0014 284 ----------GVELRGDAEALA-----LLPDAV--KPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIIT 346 (417)
T ss_pred ----------CeEEEcCHHHHH-----hccccC--CCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceee
Confidence 334433322110 000000 223333457899999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCC----ChHHHHHhhheeeEEEEe
Q 015249 345 NNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE----GSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 345 ~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~----~g~~~l~~~~~~k~v~~~ 405 (410)
+|.+.+++|.+++++..||||.++.|.++.-||-..+-|+..+ +|+-||+++|..|++..+
T Consensus 347 e~~~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G 411 (417)
T COG0014 347 EDYANAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRG 411 (417)
T ss_pred CCHHHHHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEeC
Confidence 9999999999999999999999999999888987777777644 999999999999998875
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.3e-22 Score=182.65 Aligned_cols=297 Identities=18% Similarity=0.175 Sum_probs=238.5
Q ss_pred CCcceeEEeeeceEEEEEcCCCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHH----cCCCCCcEEEEeC
Q 015249 60 PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQ----AGIPPGVVNVVMG 135 (410)
Q Consensus 60 ~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~----aglP~g~v~~v~g 135 (410)
.+...+....|+||.++|-...- -.+..-...|+++||.+++|....+..+...|.++..+ .|.|.+.++++..
T Consensus 101 dgL~L~qvt~PiGvLLVIFESRP--d~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~v~~al~~~~~~~~aV~LV~s 178 (433)
T KOG4165|consen 101 DGLELEQVTVPIGVLLVIFESRP--DCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKLVQEALGTHGGPGKAVQLVTS 178 (433)
T ss_pred CCceEEEeeccceEEEEEeccCc--hHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHHHHHHhhhccCchhhhhheec
Confidence 45556677889999999955332 23344456789999999999999888888777776554 4778999999987
Q ss_pred CchhHHhHHhcCCCccEEEEeCcHHHHHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCcccc
Q 015249 136 NAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVC 215 (410)
Q Consensus 136 ~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a 215 (410)
..++.+.|--+..||.|.-.||...-+.|.... ..||..+..|.+.++|+.|+|+++|.+-+..+++.+.. .|++
T Consensus 179 -REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~t---kIPVLGHA~GichvYvd~dad~~kA~riv~DaK~dYPA-aCNA 253 (433)
T KOG4165|consen 179 -REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTT---KIPVLGHAEGICHVYVDKDADLDKAKRIVRDAKCDYPA-ACNA 253 (433)
T ss_pred -HHHHHHHhhhhhheeEEecCCcHHHHHHHhhcc---cCcccccccceeEEEeccccCHHHHHHHHhcccCCCch-hhhh
Confidence 466777777788899999999999988887654 38999999999999999999999999988888888765 8999
Q ss_pred CCeEEEecch-HHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecc
Q 015249 216 ANRVLVQEGI-YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEP 294 (410)
Q Consensus 216 ~~~v~V~~~~-~~~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~P 294 (410)
.+.+++|++. ...|++.|...+. .+|.++.+|.....
T Consensus 254 mETLLIh~dl~~~~~~~~l~~~l~----------------------------------~~gVtl~agpkl~~-------- 291 (433)
T KOG4165|consen 254 METLLIHKDLEQSPFFDDLINMLK----------------------------------EEGVTLHAGPKLAA-------- 291 (433)
T ss_pred HHHHhccHhhhhcchHHHHHHHHH----------------------------------hcCeEEecChhHHh--------
Confidence 9999999973 3445555544432 24666655543321
Q ss_pred eEeccCCCCCcccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCC
Q 015249 295 TVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA 374 (410)
Q Consensus 295 tv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~ 374 (410)
++.-.++...-+..|+-.-.+++-.+++.++||+.+|..+.+++-+|.|+|...++.|.+.+++..|+.|.++.+.+++
T Consensus 292 -~l~~~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~~VDSa~vf~NASTRFaDGf 370 (433)
T KOG4165|consen 292 -LLKFSPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEHFLKHVDSACVFHNASTRFADGF 370 (433)
T ss_pred -hcCcCCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHHHHHhccchhheeecccccccccc
Confidence 1111144555677888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCCCCC----CChHHHHHhhheeeEEEEec
Q 015249 375 PFGGVKQSGLGR----EGSKYGMDEFLEIKYVCLGD 406 (410)
Q Consensus 375 pfGg~~~SG~g~----~~g~~~l~~~~~~k~v~~~~ 406 (410)
-||-..+-|+.. .+|+.|++-.+.+||+..++
T Consensus 371 RfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG~ 406 (433)
T KOG4165|consen 371 RFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRGK 406 (433)
T ss_pred cccccceeeeeccceeccCCccccceeeeeeEEecC
Confidence 998777777653 29999999999999987754
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.5e-16 Score=157.75 Aligned_cols=332 Identities=16% Similarity=0.146 Sum_probs=217.0
Q ss_pred hHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH--HHHHHHHHhCc--cccCCCCCcceeEEeeeceEEEEEcC
Q 015249 4 VWEERKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEF--YAEEAKRVYGE--IIPATLPDRRLFVLKQPVGVAGAITP 79 (410)
Q Consensus 4 ~~~~~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~P~Gvv~~i~p 79 (410)
.|....+..++.+.+..-+|.+....+. +.....+++. .....+...+. ....+.+....+..+.|+|++++|.|
T Consensus 18 ~~~~~~~~~r~~~~l~~~~g~~~~~~~~-l~~~~~~~~r~~L~~~l~~el~~~~~Ld~~~~~~~~~~~~~p~g~v~Hi~a 96 (399)
T PF05893_consen 18 RWLDPDYPRRAIELLPKITGYSPEMVEY-LEALMRWFRRENLERKLERELGNPESLDGWVPRGDGYVRAFPRGLVFHIAA 96 (399)
T ss_pred HhcCCCchHHHHHhhhhhcCCCHHHHHH-HHHHHHhcCHHHHHHHHHHhcCCHhHhhcccccccchhhccCCceEEEEcC
Confidence 4444444445677777888888777666 5555554421 11111111121 11122233346788999999999999
Q ss_pred CCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCC----CcEEEE--eCCchhHHhHHhcCCCccEE
Q 015249 80 WNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPP----GVVNVV--MGNAPDIGDALLTSPQVRKI 153 (410)
Q Consensus 80 ~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~----g~v~~v--~g~~~~~~~~l~~~~~v~~v 153 (410)
.|.|+ ..++.++.+|.+||..|+|+|...+.++..+.+.|.+. .|. ..+.++ ++...++.+.+.. ..|.+
T Consensus 97 gNvp~-~~~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~d~~~~~~~~~--~~D~v 172 (399)
T PF05893_consen 97 GNVPL-VGFYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGGDEELEEALSQ--QADAV 172 (399)
T ss_pred CCccc-hHHHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCCchHHHHHHHH--HCCEE
Confidence 99999 45555778999999999999999999999999999888 664 445666 3444556666664 57889
Q ss_pred EEeCcHHHHHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEe---cchHHHHH
Q 015249 154 TFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ---EGIYEKFA 230 (410)
Q Consensus 154 ~ftGs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~---~~~~~~f~ 230 (410)
+.+||.++.+.+.+..+ ...+.+....-.+-.++..+++++++++.+..-.+...+|.|.|++.|||. ..-.++|.
T Consensus 173 v~wGgd~ti~~ir~~~~-~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~~ifv~~g~~~~~~~f~ 251 (399)
T PF05893_consen 173 VAWGGDETIRAIRQPLP-PGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSPQVIFVETGDGDSVEEFA 251 (399)
T ss_pred EEeCCHHHHHHHHHHcC-CCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCCeEEEEECCCcccHHHHH
Confidence 99999999999988443 223344444466667777788999999999999999999999999999999 34467888
Q ss_pred HHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHH-----HHHHCCCeEeeCCcccCCCCceecceEeccCCCCCc
Q 015249 231 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE-----DAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEML 305 (410)
Q Consensus 231 ~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~-----~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~ 305 (410)
++|.+++.+..--.|.. ..+.+....+....+ .+...+.++..+... ..||+....+ .
T Consensus 252 ~~L~~~L~~~~~~~p~~-------~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--------~~~V~~~~~~--~ 314 (399)
T PF05893_consen 252 ERLAEALERAAERYPRG-------ELSIDEAAAISSLRAEAELRYALDGEYRVWSSDDN--------SWTVIVSPEP--P 314 (399)
T ss_pred HHHHHHHHHHHHhCCCc-------CCCHHHHHHHHHHHHHHHHHHHhcCCcceeecCCC--------CEEEEECCCc--c
Confidence 88877776543211211 112223233333322 234344444422211 2355533221 2
Q ss_pred ccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcc-ee
Q 015249 306 VSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YG 360 (410)
Q Consensus 306 ~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~-~g 360 (410)
. ....++=++.|.++++.+|++..++....--|++++... ....++++.+. .|
T Consensus 315 ~-~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~G 368 (399)
T PF05893_consen 315 L-LPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAG 368 (399)
T ss_pred c-ccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcC
Confidence 1 233345688999999999999999887442378887654 45566666433 44
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.2e-14 Score=117.64 Aligned_cols=143 Identities=26% Similarity=0.351 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc---C-CCCceecceEeccCC
Q 015249 226 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH---S-LGMTFYEPTVLSNVK 301 (410)
Q Consensus 226 ~~~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~---~-~~~~~~~Ptv~~~~~ 301 (410)
...+.+.|++..+.+++.+...+.+|. .+..+++.++|+. .....|+-. . ..++|..||++. +.
T Consensus 8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS------~~~~~~r~~yl~~ya~~~f~~~tiLs-vt 75 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQS------EDPLDGRFIYLPGYAEGNFVGPTILS-VT 75 (157)
T ss_pred hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcC------cCccCCceEEeeccccCCcccceEEE-ec
Confidence 577888999999999999988888886 6677788877775 133333221 1 357999999998 99
Q ss_pred CCCcccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCCC
Q 015249 302 SEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVK 380 (410)
Q Consensus 302 ~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pfGg~~ 380 (410)
|+|.++.||+||||+....-.+++|+|.++|+.+||....|||.+.+.++.+.+..++|.+.+|.+.. ..+...|-|.+
T Consensus 76 P~ms~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip~ilk~~sfsg~~ 155 (157)
T KOG2449|consen 76 PNMSCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIPVILKMFSFSGDR 155 (157)
T ss_pred CCcceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccccccccceeccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999998654 34555565544
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.9e-12 Score=113.80 Aligned_cols=174 Identities=21% Similarity=0.225 Sum_probs=134.5
Q ss_pred CcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHH
Q 015249 184 APCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEK 263 (410)
Q Consensus 184 ~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~ 263 (410)
.-+||.++.|++.|+..++.++-..-+ ..+...|+|||++.|+|+++++.+++.+. +. +.+...+.+
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl~------~~-----va~Hpny~r 72 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPLS------PQ-----VANHPNYLR 72 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccCC------hh-----hccCcHHHH
Confidence 348999999999999999999876665 45777899999999999999999987652 22 234445666
Q ss_pred HHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHHHHHhhcC--CCCcEEE
Q 015249 264 VETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT--NAGLAAY 341 (410)
Q Consensus 264 ~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~--~~gl~~s 341 (410)
..+.++. .+++.+.+.... ....-.|.++.+.+.+. +.. -..+|++++.|++..||+++.+.. +++ ++|
T Consensus 73 sl~~i~~---l~~~~I~~~~~~--~~~~aSPilV~d~~h~~--fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVs 143 (215)
T PF07368_consen 73 SLKKIKC---LNAKTIVADFEN--VPPPASPILVCDFTHSY--FGD-GPTGVITLHTFRTPKEAIELCAKETLPFD-SVS 143 (215)
T ss_pred HHHHHHh---cCCeEEEecccC--CCCCCCCEEEcCCCHHH--cCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEE
Confidence 6666665 689999884332 12345799998766543 233 346899999999999999999874 444 999
Q ss_pred EecCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCC
Q 015249 342 IFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGV 379 (410)
Q Consensus 342 v~s~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pfGg~ 379 (410)
||++..+.+.+++.++++..++|||... ..|..++-..
T Consensus 144 iW~ekla~~Yel~~~l~~~~f~iNC~~V~L~PI~~~~~~ 182 (215)
T PF07368_consen 144 IWNEKLASAYELAARLPCDTFYINCFNVDLSPIMPFFAA 182 (215)
T ss_pred EeCcHHHHHHHHHHhCCCCEEEEEeccCCchhhhhhhhc
Confidence 9999999999999999999999999876 3455554443
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.5e-07 Score=104.98 Aligned_cols=99 Identities=15% Similarity=0.132 Sum_probs=81.2
Q ss_pred CCCCcceeEEeeeceEEEEEcCCCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 015249 58 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNA 137 (410)
Q Consensus 58 ~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~ 137 (410)
+++|+++.++..|+|+++|++||| ..++.++..||++||+||+||++.++. ..+.+|..+.+.+
T Consensus 1066 GPTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~---------~~~~Lp~~~~~~~---- 1129 (1208)
T PRK11905 1066 GPTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA---------ALADLPGLVAARI---- 1129 (1208)
T ss_pred CCCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH---------HHHhCcccccccc----
Confidence 567999999999999999999999 457889999999999999999988652 1223566555544
Q ss_pred hhHHhHHhcCCCccEEEEeCcHHHHHHHHHHhcccc
Q 015249 138 PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 173 (410)
Q Consensus 138 ~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~ 173 (410)
..+..+..+++++.|.|+|++++.+.+.+.++++.
T Consensus 1130 -~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~ 1164 (1208)
T PRK11905 1130 -DWTQDWEADDPFAGALLEGDAERARAVRQALAARP 1164 (1208)
T ss_pred -ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCC
Confidence 23346777888999999999999999999998875
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.0086 Score=59.23 Aligned_cols=261 Identities=23% Similarity=0.234 Sum_probs=123.8
Q ss_pred CCcceeEEeeeceEEEEEcCC-Ccchh-hhhhhccchhccCCeEEE--ecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeC
Q 015249 60 PDRRLFVLKQPVGVAGAITPW-NFPLA-MITRKVGPALACGCTVVV--KPSEFTPLTALAAAELALQAGIPPGVVNVVMG 135 (410)
Q Consensus 60 ~~~~~~~~~~P~Gvv~~i~p~-n~p~~-~~~~~~~~AL~~Gn~vvl--kps~~~~~~~~~l~~~l~~aglP~g~v~~v~g 135 (410)
+|...-..+.|+--|++..|. .+|+. +++..++||-.+|..=|+ .|....-.....+.-+...+|..+ +..-
T Consensus 96 ~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e----vy~v 171 (412)
T PF00815_consen 96 PGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE----VYKV 171 (412)
T ss_dssp TTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE----EEE-
T ss_pred CCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE----EEec
Confidence 466667789999999999994 34443 334567899999986554 454443333445555667787753 2222
Q ss_pred CchhHHhHHhc----CCCccEEEEeCcHHHHHHHHHHhccccceeeeecc-CCCc--EEeccCCCHHHHHHHHHHHHHhc
Q 015249 136 NAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAP--CIVFDDADLNVAVNGALAAKFRN 208 (410)
Q Consensus 136 ~~~~~~~~l~~----~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~g-g~~~--~iV~~~adl~~a~~~i~~~~~~~ 208 (410)
.|.+.-.+|.- -|.||.|+=.|..-+..+=+.... .|-+.+- |-+= +|.++++|.+.++..++.-+=+.
T Consensus 172 GGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd 247 (412)
T PF00815_consen 172 GGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFG----DVGIDMIAGPSEVLVIADETANPEFVAADLLAQAEHD 247 (412)
T ss_dssp -HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHH----S-EES------EEEEEE-TTS-HHHHHHHHHHHHTT-
T ss_pred ccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcC----CcccCCCCCCCceEEEECCCCCHHHHHHHHHHHhccC
Confidence 25554444432 488999998888765433222221 2222221 3332 34456789999888877655443
Q ss_pred cCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCC
Q 015249 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 288 (410)
Q Consensus 209 ~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~ 288 (410)
.. .+.++|..+ +++.+++.+++.+.- .-+-..+. +++++.
T Consensus 248 ~~-----a~~vLvt~s--~~la~~V~~~v~~~l-----------~~l~r~~i-------~~~sl~--------------- 287 (412)
T PF00815_consen 248 PD-----AQAVLVTTS--EELAEAVEAEVERQL-----------EELPRREI-------AEKSLE--------------- 287 (412)
T ss_dssp TT------EEEEEES---HHHHHHHHHHHHHHH-----------TT-TTHHH-------HHHHHT---------------
T ss_pred CC-----CceEEEECC--HHHHHHHHHHHHHHH-----------HhCCchHH-------HHHHHH---------------
Confidence 32 334566544 444544444443320 00001111 111111
Q ss_pred CceecceEeccCCCCCcccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcc-eeEEEECCC
Q 015249 289 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVGVNEG 367 (410)
Q Consensus 289 ~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~-~g~v~iN~~ 367 (410)
--.++.++|++|+++++|..--= ...|.++|+. .+..+++ +|.|++..+
T Consensus 288 --------------------------~g~ii~~~~l~ea~~~~N~~APE-HLel~~~~~~---~~~~~i~~AGaiFlG~~ 337 (412)
T PF00815_consen 288 --------------------------NGAIIVVDSLEEAIELANEYAPE-HLELQVEDPE---ELLEKIRNAGAIFLGEY 337 (412)
T ss_dssp --------------------------T-EEEE-SSHHHHHHHHHHH--S-EEEEESTTHH---HHGGG--S-SEEEESTT
T ss_pred --------------------------CCeEEEECCHHHHHHHHHHhhHH-HHHHHHcCHH---HHHHHhhccChhhcCCC
Confidence 11245679999999999985322 5778888874 5777766 899999987
Q ss_pred CC---------CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 368 LI---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 368 ~~---------~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
+. .++.+|-+ |..+..|.-+...|++.-++.
T Consensus 338 tp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~ 377 (412)
T PF00815_consen 338 TPEALGDYAAGPNHVLPTG-----GTARFSSGLSVDDFLKRISVQ 377 (412)
T ss_dssp --HHHHHHTSSS------T-----TGGGT---S-GGGGEEEEEEE
T ss_pred CCHHHhhhccCCCccCCCC-----ccccccCCCcHHHccceeeEE
Confidence 64 23455554 455667777888998876653
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.012 Score=57.73 Aligned_cols=258 Identities=21% Similarity=0.244 Sum_probs=147.2
Q ss_pred CCcceeEEeeeceEEEEEcC---CCcchhhhhhhccchhccCCeEEE--ecCCCcHHHHHHHHHHHHHcCCCCCcEEEEe
Q 015249 60 PDRRLFVLKQPVGVAGAITP---WNFPLAMITRKVGPALACGCTVVV--KPSEFTPLTALAAAELALQAGIPPGVVNVVM 134 (410)
Q Consensus 60 ~~~~~~~~~~P~Gvv~~i~p---~n~p~~~~~~~~~~AL~~Gn~vvl--kps~~~~~~~~~l~~~l~~aglP~g~v~~v~ 134 (410)
+|......++|+--|++..| .-||.. ++...+||-.+|+.=|+ .|.+..- ....+.-+...+|+.+ ++++
T Consensus 106 ~Gv~~g~~~~Pi~~VGlYVPGG~A~ypSt-vLM~avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e-Iy~v-- 180 (425)
T COG0141 106 PGVVLGQRWRPIERVGLYVPGGKAAYPST-VLMNAVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE-VYKV-- 180 (425)
T ss_pred CCcEEEEEEEEhhheEEEccCCCcCChHH-HHHhhccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH-HHHc--
Confidence 56677789999999999999 466653 44556899999987554 4554422 3334444456666653 2221
Q ss_pred CCchhHHhHHhcC----CCccEEEEeCcHHHHHHHHHHhccccceeeeecc-CCCc--EEeccCCCHHHHHHHHHHHHHh
Q 015249 135 GNAPDIGDALLTS----PQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAP--CIVFDDADLNVAVNGALAAKFR 207 (410)
Q Consensus 135 g~~~~~~~~l~~~----~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~g-g~~~--~iV~~~adl~~a~~~i~~~~~~ 207 (410)
| |.+.-.+|.-. +.||.|+=.|..-+..+=+... ..+-+.+- |.+= +|-++++|.+..+..++.-+=+
T Consensus 181 G-GAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAKr~v~----g~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQAEH 255 (425)
T COG0141 181 G-GAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRLVS----GVVGIDMIAGPSEVLVIADETANPDFVAADLLSQAEH 255 (425)
T ss_pred c-CHHHHHHHHccCCcCCccCeeeCCCcHHHHHHHHHhh----CCcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhhc
Confidence 2 55555556554 7899998888776543311111 11222221 3332 3334458999988887665544
Q ss_pred ccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC
Q 015249 208 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL 287 (410)
Q Consensus 208 ~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~ 287 (410)
.. ..+.|+|..+ ++|.+++.+++.+.-- - .. ..+. +.+++.+
T Consensus 256 d~-----~a~aiLvT~s--~~la~~v~~~v~~~l~-----------~-l~--~~ei----~~~~l~~------------- 297 (425)
T COG0141 256 DP-----DAQAILVTDS--EELAEAVEAAVERQLE-----------T-LP--RAEI----ARKALEN------------- 297 (425)
T ss_pred CC-----CceEEEEeCc--HHHHHHHHHHHHHHHH-----------h-cc--HHHH----HHHHHHh-------------
Confidence 32 2445666554 4555555555443200 0 00 0111 1111100
Q ss_pred CCceecceEeccCCCCCcccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcc-eeEEEECC
Q 015249 288 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVGVNE 366 (410)
Q Consensus 288 ~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~-~g~v~iN~ 366 (410)
+ -.|+.++|++|+++++|..--= ..-|+++|+. .+..+++ +|.|+++.
T Consensus 298 ------------------------~---g~iilv~~l~ea~~~~N~~APE-HLei~~~~p~---~~l~~I~nAGsIFlG~ 346 (425)
T COG0141 298 ------------------------Y---GAIILVDDLDEAVEISNEYAPE-HLELQTENPR---ELLGKIRNAGSIFLGH 346 (425)
T ss_pred ------------------------C---CeEEEECCHHHHHHHHHhhChH-hhhhhhcCHH---HHHHHhcccceeeecC
Confidence 0 1244568999999999985322 4567778865 4666666 89999998
Q ss_pred CCCC---------CCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 015249 367 GLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 401 (410)
Q Consensus 367 ~~~~---------~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~ 401 (410)
++.. ++-+|- +|+-+..+.-+...|++.-+
T Consensus 347 ~sPe~~GDY~aG~NHVLPT-----~g~AR~~s~L~v~dF~K~~t 385 (425)
T COG0141 347 YSPESLGDYAAGPNHVLPT-----SGTARFSSGLSVYDFLKRST 385 (425)
T ss_pred CCCccccccccCCCccCCC-----CccchhcCCccHHHhhhHHH
Confidence 6541 233443 45556666667777776543
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.071 Score=52.44 Aligned_cols=258 Identities=21% Similarity=0.208 Sum_probs=147.1
Q ss_pred CCcceeEEeeeceEEEEEcCC-C--cchhhhhhhccchhccCCeEEE--ecCCCcHHHHHHHHHHHHHcCCCCCcEEEEe
Q 015249 60 PDRRLFVLKQPVGVAGAITPW-N--FPLAMITRKVGPALACGCTVVV--KPSEFTPLTALAAAELALQAGIPPGVVNVVM 134 (410)
Q Consensus 60 ~~~~~~~~~~P~Gvv~~i~p~-n--~p~~~~~~~~~~AL~~Gn~vvl--kps~~~~~~~~~l~~~l~~aglP~g~v~~v~ 134 (410)
+|...-..+.|+--|++..|+ . ||. +.+...+||-.+|+.=|+ .|....-.....+.-+...+|..+ +..
T Consensus 78 ~Gv~~g~~~~Pi~rvGlYVPGG~a~~pS-tvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~AA~~~Gv~e----Iy~ 152 (393)
T TIGR00069 78 PGVILGQRVRPLERVGLYVPGGRAPYPS-TVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLAAAKLAGVDE----VYK 152 (393)
T ss_pred CCeEEEEEEEEeheEEEEeCCCCCcchH-HHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHHHHHHcCCCe----ehh
Confidence 456667789999999999997 3 444 444567899999987654 444221112233333557777763 332
Q ss_pred CCchhHHhHHh----cCCCccEEEEeCcHHHHHHHHHHhccccceeeeecc-CCCc--EEeccCCCHHHHHHHHHHHHHh
Q 015249 135 GNAPDIGDALL----TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAP--CIVFDDADLNVAVNGALAAKFR 207 (410)
Q Consensus 135 g~~~~~~~~l~----~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~g-g~~~--~iV~~~adl~~a~~~i~~~~~~ 207 (410)
-.|.+.-.+|. +-|.||.|+=.|..-+..+=+... ..|-+.+- |-+= +|-++++|.+.++..++.-+=+
T Consensus 153 vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~AK~~v~----g~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAEH 228 (393)
T TIGR00069 153 VGGAQAIAALAYGTETVPKVDKIVGPGNIYVTAAKKLVF----GDVGIDMPAGPSEVLVIADETANPEFVAADLLSQAEH 228 (393)
T ss_pred cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhc----CccCcCCCCCCceEEEEeCCCCCHHHHHHHHHHHhcc
Confidence 22455444443 257899998888776544322211 12333322 3333 3344568999988887665433
Q ss_pred ccCCccccCCeEEEec--chHHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc
Q 015249 208 NSGQTCVCANRVLVQE--GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 285 (410)
Q Consensus 208 ~~Gq~C~a~~~v~V~~--~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~ 285 (410)
.. . .+.++|.. ++.++..+.+.+++..+. . . +.+++++.+
T Consensus 229 d~----~-a~~iLvT~s~~la~~V~~~v~~ql~~l~---------------r---~----~i~~~al~~----------- 270 (393)
T TIGR00069 229 DP----D-AQAILVTTSEELAEAVQEEIERQLATLP---------------R---R----EIARKSLED----------- 270 (393)
T ss_pred CC----C-CcEEEEECCHHHHHHHHHHHHHHHHhCC---------------h---H----HHHHHHHHh-----------
Confidence 22 2 34455543 334444444444444331 0 1 111222111
Q ss_pred CCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcc-eeEEEE
Q 015249 286 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVGV 364 (410)
Q Consensus 286 ~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~-~g~v~i 364 (410)
+| .++.++|.+|+++++|..--= ..-|+++|+. .+..+++ +|.|++
T Consensus 271 --------------------------~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~p~---~~l~~I~nAGaiFl 317 (393)
T TIGR00069 271 --------------------------NG---AIILVDDLEEAIEISNDYAPE-HLELQTKNPE---ELLPKIRNAGSIFL 317 (393)
T ss_pred --------------------------CC---EEEEECCHHHHHHHHHhhChH-hheehhCCHH---HHHhhcCccceecc
Confidence 01 234568999999999985322 3457777864 4666665 899999
Q ss_pred CCCCCC---------CCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 365 NEGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 365 N~~~~~---------~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
..++.. ++-+|- +|+.+..+.-+.+.|++.-++
T Consensus 318 G~~tp~a~GDY~aG~NHvLPT-----~G~Ar~~sgL~v~~F~K~~s~ 359 (393)
T TIGR00069 318 GPYTPEAAGDYAAGPNHVLPT-----GGTARFYSGLSVLDFLKRITV 359 (393)
T ss_pred CCCCchhhhhccCCCCcccCC-----CcceeecCCccHHHhccceeE
Confidence 876541 233443 455667777788888887654
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.067 Score=53.17 Aligned_cols=258 Identities=19% Similarity=0.186 Sum_probs=145.8
Q ss_pred CCcceeEEeeeceEEEEEcCC-Ccchh-hhhhhccchhccCCeEEE--ecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeC
Q 015249 60 PDRRLFVLKQPVGVAGAITPW-NFPLA-MITRKVGPALACGCTVVV--KPSEFTPLTALAAAELALQAGIPPGVVNVVMG 135 (410)
Q Consensus 60 ~~~~~~~~~~P~Gvv~~i~p~-n~p~~-~~~~~~~~AL~~Gn~vvl--kps~~~~~~~~~l~~~l~~aglP~g~v~~v~g 135 (410)
+|...-..+.|+--|++..|. .+|+. +.+...+||-.+|+.=|+ .|..........|+ +...+|..+ +..-
T Consensus 105 ~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~~Gv~e----Iy~v 179 (426)
T PRK12447 105 PGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVA-AMHLAGADE----IYVL 179 (426)
T ss_pred CCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-HHHHcCCCe----ehhc
Confidence 455566789999999999996 33432 344567899999987654 44432112222333 457777753 3222
Q ss_pred CchhHHhHHh----cCCCccEEEEeCcHHHHHHHHHHhccccceeeeecc-CCCc--EEeccCCCHHHHHHHHHHHHHhc
Q 015249 136 NAPDIGDALL----TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAP--CIVFDDADLNVAVNGALAAKFRN 208 (410)
Q Consensus 136 ~~~~~~~~l~----~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~g-g~~~--~iV~~~adl~~a~~~i~~~~~~~ 208 (410)
.|.+.-.+|. +-|.||.|+=.|..-+..+=+... ..|-+.+- |-+= +|-++++|.+..+..++.-+=+.
T Consensus 180 GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~----g~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd 255 (426)
T PRK12447 180 GGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLF----GRVGIDLFAGPTETLVIADDTADPELVATDLLGQAEHG 255 (426)
T ss_pred CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhc----CccCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhccC
Confidence 2455444443 257899998888776544322222 12322222 3333 33445689998888876654333
Q ss_pred cCCccccCCeEEEec--chHHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC
Q 015249 209 SGQTCVCANRVLVQE--GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 286 (410)
Q Consensus 209 ~Gq~C~a~~~v~V~~--~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~ 286 (410)
. . .+.++|.. ++.++..+.+.++++.+. . . +.+++++.+
T Consensus 256 ~----~-a~~iLvT~s~~la~~V~~~v~~ql~~l~---------------r---~----~i~~~sl~~------------ 296 (426)
T PRK12447 256 P----N-SPAVLITTSRKLAEEVLAEIERLLAILP---------------T---A----DVASAAWRD------------ 296 (426)
T ss_pred C----C-CceEEEECCHHHHHHHHHHHHHHHHhCC---------------H---H----HHHHHHHHh------------
Confidence 2 2 34455544 333444444444433321 0 0 111221111
Q ss_pred CCCceecceEeccCCCCCcccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcc-eeEEEEC
Q 015249 287 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVGVN 365 (410)
Q Consensus 287 ~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~-~g~v~iN 365 (410)
+| .++.++|.+|+++++|..--= ...|+++|.. .+..+++ +|.|++.
T Consensus 297 -------------------------~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaiFlG 344 (426)
T PRK12447 297 -------------------------YG---EVILCDDLEEMVAEADRYASE-HVQVMTEDPD---WFLENMTNYGALFLG 344 (426)
T ss_pred -------------------------CC---EEEEECCHHHHHHHHHhhChH-heeehhCCHH---HHHhhcCccceeccC
Confidence 01 234568999999999985332 4557788874 5666666 8999997
Q ss_pred CCCC--C-------CCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 366 EGLI--S-------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 366 ~~~~--~-------~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
.++. . ++-+|- +|+.+..|.-+.+.|++.-++
T Consensus 345 ~~sp~a~GDY~aGpNHvLPT-----~G~Ar~~sgLsv~~FlK~~s~ 385 (426)
T PRK12447 345 ERTNVAYGDKVIGTNHVLPT-----SGAARYTGGLWVGKFLKTVTY 385 (426)
T ss_pred CCCchhhhhcccCCCcccCC-----CcceeecCCCcHHHhccceeE
Confidence 6554 1 233443 456677777788888887654
|
|
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.094 Score=51.91 Aligned_cols=258 Identities=19% Similarity=0.216 Sum_probs=146.2
Q ss_pred CCcceeEEeeeceEEEEEcCC-C--cchhhhhhhccchhccCCeEEE--ecCCCcHHHHHHHHHHHHHcCCCCCcEEEEe
Q 015249 60 PDRRLFVLKQPVGVAGAITPW-N--FPLAMITRKVGPALACGCTVVV--KPSEFTPLTALAAAELALQAGIPPGVVNVVM 134 (410)
Q Consensus 60 ~~~~~~~~~~P~Gvv~~i~p~-n--~p~~~~~~~~~~AL~~Gn~vvl--kps~~~~~~~~~l~~~l~~aglP~g~v~~v~ 134 (410)
+|......+.|+--|++..|. . ||. +++...+||-.+|+.=|+ .|+.... ....+.-+...+|..+ +..
T Consensus 100 ~gv~~g~~~~Pi~rvGlYVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPp~~~~-i~p~iL~Aa~~~Gv~e----Iy~ 173 (416)
T PRK13770 100 ESVECYEIYHPLESVGIYVPGGKASYPS-TVLMTATLAQVAGVENIVVVTPPQPNG-VSQEVLAACYITQVNQ----VFQ 173 (416)
T ss_pred CCcEEEEEEeeeeeeEEEccCCCCCccH-HHHHhhccHhhcCCCeEEEEeCcCCCC-CCHHHHHHHHHcCCCe----eec
Confidence 455556789999999999996 3 444 344567899999987665 3443211 2223333457777753 222
Q ss_pred CCchhHHhHHh----cCCCccEEEEeCcHHHHHHHHHHhccccceeeeecc-CCCc--EEeccCCCHHHHHHHHHHHHHh
Q 015249 135 GNAPDIGDALL----TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAP--CIVFDDADLNVAVNGALAAKFR 207 (410)
Q Consensus 135 g~~~~~~~~l~----~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~g-g~~~--~iV~~~adl~~a~~~i~~~~~~ 207 (410)
-.|.+.-.+|. +-|.||.|+=.|..-+..+=+...+ .|-+.+- |-+= +|-++++|.+..+..++.-+=+
T Consensus 174 iGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAEH 249 (416)
T PRK13770 174 VGGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFG----QVGIDQIAGPTEIALIIDETADLDAIVYDVFAQAEH 249 (416)
T ss_pred cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC----CcCcCCCCCCceeEEEecCCCCHHHHHHHHHHHhcc
Confidence 22455444443 2578999987777765433222211 2222221 3332 3444568999988887765433
Q ss_pred ccCCccccCCeEEEec--chHHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc
Q 015249 208 NSGQTCVCANRVLVQE--GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 285 (410)
Q Consensus 208 ~~Gq~C~a~~~v~V~~--~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~ 285 (410)
.. . .+.++|.. .+.++..+.+..++..+. . . +.+++++.+
T Consensus 250 d~----~-a~~iLvT~s~~la~~V~~ev~~ql~~lp---------------r---~----~i~~~al~~----------- 291 (416)
T PRK13770 250 DE----L-ARTYVISEDAQVLKDLESRIAKALPNVD---------------R---Y----DIVSKSIAN----------- 291 (416)
T ss_pred CC----C-CcEEEEeCCHHHHHHHHHHHHHHHHhCC---------------h---H----HHHHHHHHh-----------
Confidence 32 2 34455543 334444444444444331 0 0 111111111
Q ss_pred CCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcc-eeEEEE
Q 015249 286 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVGV 364 (410)
Q Consensus 286 ~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~-~g~v~i 364 (410)
+ -.++.++|.||+++++|..-.= ..-|+++|+. .+..+++ +|.|++
T Consensus 292 --------------------------~---g~ii~v~~~eeai~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaiFl 338 (416)
T PRK13770 292 --------------------------Q---HYLIHASNFDEACHVMNTIAPE-HASIQTVNPQ---PYIEKVKYVGALFI 338 (416)
T ss_pred --------------------------C---CEEEEECCHHHHHHHHHhhChH-hheehhCCHH---HHHhhCCEeceecc
Confidence 0 1234569999999999985332 3457778874 4666666 899999
Q ss_pred CCCCC---------CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 365 NEGLI---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 365 N~~~~---------~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
..++. .++-+|- +|+.+..|.-+...|++.-++.
T Consensus 339 G~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 381 (416)
T PRK13770 339 GHYSPEVIGDYVAGPSHVLPT-----NRTARFTNGLSVNDFLTRNTVI 381 (416)
T ss_pred CCCCchhhhccccCCCCcCCC-----CcceeccCCCcHHHeecceeeE
Confidence 76654 1233444 3556666667888888876543
|
|
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.11 Score=51.70 Aligned_cols=258 Identities=21% Similarity=0.221 Sum_probs=146.8
Q ss_pred CCcceeEEeeeceEEEEEcCC---CcchhhhhhhccchhccCCeEEE--ecCCCcHHHHHHHHHHHHHcCCCCCcEEEEe
Q 015249 60 PDRRLFVLKQPVGVAGAITPW---NFPLAMITRKVGPALACGCTVVV--KPSEFTPLTALAAAELALQAGIPPGVVNVVM 134 (410)
Q Consensus 60 ~~~~~~~~~~P~Gvv~~i~p~---n~p~~~~~~~~~~AL~~Gn~vvl--kps~~~~~~~~~l~~~l~~aglP~g~v~~v~ 134 (410)
+|...-..+.|+--|++..|+ -||. +.+...+||-.+|..=|+ .|.... .....+.-+...+|..+ +..
T Consensus 110 ~Gv~~g~~~~Pi~~vG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPp~~g-~i~p~vL~AA~~~Gv~e----Iy~ 183 (425)
T PRK00877 110 PGVRLGQRWRPIERVGLYVPGGKAAYPS-SVLMNAIPAKVAGVKEIVMVTPPPDG-EINPAILAAAALAGVDE----VYK 183 (425)
T ss_pred CCeEEEEEEEehHHeEEEccCCCCCchH-HHHHhhcchhhcCCCeEEEEeCCCCC-CCCHHHHHHHHHcCCCe----eec
Confidence 455566789999999999996 3554 444567899999987654 444311 12333344557777763 332
Q ss_pred CCchhHHhHHh----cCCCccEEEEeCcHHHHHHHHHHhccccceeeeecc-CCCc--EEeccCCCHHHHHHHHHHHHHh
Q 015249 135 GNAPDIGDALL----TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAP--CIVFDDADLNVAVNGALAAKFR 207 (410)
Q Consensus 135 g~~~~~~~~l~----~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~g-g~~~--~iV~~~adl~~a~~~i~~~~~~ 207 (410)
-.|.+.-.+|. +-|.||.|+=.|..-+..+=+... ..|-+.+- |-+= +|-++++|.+.++..++.-+=+
T Consensus 184 vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~----g~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAEH 259 (425)
T PRK00877 184 VGGAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVF----GVVGIDMIAGPSEILVIADETADPDFVAADLLSQAEH 259 (425)
T ss_pred cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHHc----CCcCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhcc
Confidence 22555444443 356899998888776543321111 12222221 3333 3334468999988887765443
Q ss_pred ccCCccccCCeEEEecc--hHHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc
Q 015249 208 NSGQTCVCANRVLVQEG--IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 285 (410)
Q Consensus 208 ~~Gq~C~a~~~v~V~~~--~~~~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~ 285 (410)
... .+.++|..+ ..++..+.+.+++..+. . . +.+++++..
T Consensus 260 d~~-----a~aiLvT~s~~la~~V~~~v~~ql~~l~---------------r---~----~ia~~sl~~----------- 301 (425)
T PRK00877 260 DPD-----AQSILVTTSEELAEAVAAEVERQLATLP---------------R---A----EIARASLEG----------- 301 (425)
T ss_pred CCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC---------------h---H----HHHHHHHHh-----------
Confidence 322 444555443 33444444443333321 0 0 111111111
Q ss_pred CCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcc-eeEEEE
Q 015249 286 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVGV 364 (410)
Q Consensus 286 ~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~-~g~v~i 364 (410)
+| .++.++|+||+++++|..--= ...|+++|+. .+..+++ +|.|++
T Consensus 302 --------------------------~g---~iivv~~leeai~~~N~~APE-HLel~~~~p~---~~l~~I~nAGaiFl 348 (425)
T PRK00877 302 --------------------------QG---AIILVDDLEEAIELSNAYAPE-HLEIQTEDPR---ALLDRIRNAGAIFL 348 (425)
T ss_pred --------------------------CC---EEEEECCHHHHHHHHHhhChH-heeehhCCHH---HHHhhcCccceecc
Confidence 11 234569999999999985322 4557788874 4566655 999999
Q ss_pred CCCCC--C-------CCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 365 NEGLI--S-------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 365 N~~~~--~-------~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
..++. . ++-+| -+|+.+..|.-+.+.|++.-++.
T Consensus 349 G~~tp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsV~~F~K~~s~~ 391 (425)
T PRK00877 349 GPYTPESLGDYAAGPNHVLP-----TSGTARFSSGLSVYDFLKRSSVI 391 (425)
T ss_pred CCCCchhhhhcccCCCcccC-----CCcceeecCCccHHHhccceeEE
Confidence 76654 1 22344 44566777778889998876653
|
|
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.11 Score=51.22 Aligned_cols=259 Identities=20% Similarity=0.227 Sum_probs=145.0
Q ss_pred CCcceeEEeeeceEEEEEcCCC-cchh-hhhhhccchhccCCeEEE--ecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeC
Q 015249 60 PDRRLFVLKQPVGVAGAITPWN-FPLA-MITRKVGPALACGCTVVV--KPSEFTPLTALAAAELALQAGIPPGVVNVVMG 135 (410)
Q Consensus 60 ~~~~~~~~~~P~Gvv~~i~p~n-~p~~-~~~~~~~~AL~~Gn~vvl--kps~~~~~~~~~l~~~l~~aglP~g~v~~v~g 135 (410)
+|......+.|+--|++..|.- +|+. +.+...+||-.+|+.=|+ .|....-.....+.-+...+|..+ +..-
T Consensus 82 ~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~aa~~~Gv~e----iy~v 157 (390)
T cd06572 82 PGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAILAAAKLAGVDE----IYKV 157 (390)
T ss_pred CCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHHHHHHHcCCcE----Eecc
Confidence 4667778999999999999964 4443 334567899999987654 444322122223333456676653 3332
Q ss_pred CchhHHhHHh----cCCCccEEEEeCcHHHHHHHHHHhccccceeeeecc-CCCc--EEeccCCCHHHHHHHHHHHHHhc
Q 015249 136 NAPDIGDALL----TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAP--CIVFDDADLNVAVNGALAAKFRN 208 (410)
Q Consensus 136 ~~~~~~~~l~----~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~g-g~~~--~iV~~~adl~~a~~~i~~~~~~~ 208 (410)
.|.+...+|. +.|.||.|+=.|..-+..+=+.... .+-+.+- |-+= +|.++++|.+..+..++.-+=+.
T Consensus 158 GGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlIiAD~~A~p~~vAaDLLaQAEH~ 233 (390)
T cd06572 158 GGAQAIAALAYGTETIPKVDKIVGPGNIYVTAAKRLVSG----DVGIDMPAGPSEVLVIADETANPEFVAADLLSQAEHD 233 (390)
T ss_pred CCHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHHHhcC----CcCccCCCCCceEEEEeCCCCCHHHHHHHHHhhhccC
Confidence 2455444443 2678999987777765443222111 1222221 3332 34445689998888776544332
Q ss_pred cCCccccCCeEEEecc--hHHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC
Q 015249 209 SGQTCVCANRVLVQEG--IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 286 (410)
Q Consensus 209 ~Gq~C~a~~~v~V~~~--~~~~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~ 286 (410)
. ..+.+++..+ ..++..+.+.++++.+. .. + .+++...
T Consensus 234 ~-----~a~aiLvT~s~~la~~V~~~v~~ql~~l~---------------r~---~----~~~~~~~------------- 273 (390)
T cd06572 234 P-----DSQAILVTTSEELAEAVEEEVERQLAELP---------------RR---E----IAAKSLL------------- 273 (390)
T ss_pred C-----CCeEEEEECCHHHHHHHHHHHHHHHHhCC---------------cH---H----HHHHHHH-------------
Confidence 1 2344555443 33444444444333321 00 0 0111110
Q ss_pred CCCceecceEeccCCCCCcccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcc-eeEEEEC
Q 015249 287 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVGVN 365 (410)
Q Consensus 287 ~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~-~g~v~iN 365 (410)
---.++.++|.+|+++++|..--= ..-|+++|... +..+++ +|.|++.
T Consensus 274 ---------------------------~~g~ii~~~~~~eai~~~N~~APE-HLel~~~~~~~---~l~~i~nAGsiFlG 322 (390)
T cd06572 274 ---------------------------DYGAIILVDDLEEAIELANEYAPE-HLELQTEDPEE---LLEKIRNAGSIFLG 322 (390)
T ss_pred ---------------------------hCCEEEEECCHHHHHHHHHhhchh-hheeHhcCHHH---HHhhCccceEEeec
Confidence 011235668999999999985322 45677788753 566655 9999998
Q ss_pred CCCC---------CCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 366 EGLI---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 366 ~~~~---------~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
.++. .++-+|.+ |+.+..|..+...|++.-++
T Consensus 323 ~~tp~a~GDY~aGpNHvLPT~-----G~Ar~~sgL~v~~F~K~~s~ 363 (390)
T cd06572 323 PYTPEALGDYAAGPNHVLPTG-----GTARFYSGLSVDDFLKRITV 363 (390)
T ss_pred CCCchhhhccccCCCCccCCC-----cceeecCCCCHHHheeccee
Confidence 7654 13345544 45566666778888877654
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.1 Score=51.98 Aligned_cols=260 Identities=20% Similarity=0.233 Sum_probs=145.5
Q ss_pred CCcceeEEeeeceEEEEEcCC---CcchhhhhhhccchhccCCeEEE--ecCCCcHHHHHHHHHHHHHcCCCCCcEEEEe
Q 015249 60 PDRRLFVLKQPVGVAGAITPW---NFPLAMITRKVGPALACGCTVVV--KPSEFTPLTALAAAELALQAGIPPGVVNVVM 134 (410)
Q Consensus 60 ~~~~~~~~~~P~Gvv~~i~p~---n~p~~~~~~~~~~AL~~Gn~vvl--kps~~~~~~~~~l~~~l~~aglP~g~v~~v~ 134 (410)
+|...-..+.|+.-|++..|+ -||. +++..++||-.+|..=|+ .|....-.....+.-+...+|+.+ +..
T Consensus 110 ~Gv~~g~~~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~AA~~~Gv~e----Iy~ 184 (431)
T PLN02926 110 PGVRCRRVARPIGAVGLYVPGGTAVLPS-TALMLAVPAQIAGCKTVVLATPPRKDGSICPEVLYCAKKAGVTH----ILK 184 (431)
T ss_pred CCeEEEEEEechHHeeEeccCCCCCccH-HHHHhhcchhhcCCCeEEEEECCCcCCCCCHHHHHHHHHcCCCe----eec
Confidence 456666889999999999997 3554 444567899999987554 444321012223333557777763 332
Q ss_pred CCchhHHhHHh----cCCCccEEEEeCcHHHHHHHHHHhccccceeeeecc-CCCcE--EeccCCCHHHHHHHHHHHHHh
Q 015249 135 GNAPDIGDALL----TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAPC--IVFDDADLNVAVNGALAAKFR 207 (410)
Q Consensus 135 g~~~~~~~~l~----~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~g-g~~~~--iV~~~adl~~a~~~i~~~~~~ 207 (410)
-.|.+.-.+|. +-|.||.|+=.|..-+..+=+.... ...-|-+.+- |-+=+ |.++++|.+.++..++.-+=+
T Consensus 185 vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~G-~~~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLaQAEH 263 (431)
T PLN02926 185 AGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQN-SEAMVSIDMPAGPSEVLVIADKTANPVHVAADLLSQAEH 263 (431)
T ss_pred cCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhhC-CCCccccCCCCCCceeEEEeCCCCCHHHHHHHHHHHhcc
Confidence 22555444443 2568999988887765433222221 1000322222 33333 334458999888887765443
Q ss_pred ccCCccccCCeEEEecc--hHHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc
Q 015249 208 NSGQTCVCANRVLVQEG--IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 285 (410)
Q Consensus 208 ~~Gq~C~a~~~v~V~~~--~~~~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~ 285 (410)
... .+.++|..+ +.++..+.+..+++.+. . .+.+++++
T Consensus 264 dp~-----a~aiLvT~s~~la~~V~~~v~~ql~~l~---------------r-------~~i~~~sl------------- 303 (431)
T PLN02926 264 GPD-----SQVVLVAVGDVDLDAIEEEVEKQCQSLP---------------R-------GEIASKAL------------- 303 (431)
T ss_pred CCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC---------------h-------HHHHHHHH-------------
Confidence 322 344555443 23333333333333220 0 01111111
Q ss_pred CCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcc-eeEEEE
Q 015249 286 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVGV 364 (410)
Q Consensus 286 ~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~-~g~v~i 364 (410)
.- -.++.++|.+|+++++|..--= ...|+++|.. .+..+++ +|.|++
T Consensus 304 ---------------------------~~-g~iivv~~l~ea~~~~N~~APE-HLei~~~~~~---~~l~~i~nAGaiFl 351 (431)
T PLN02926 304 ---------------------------GH-SFIVVARDMAEAISFSNLYAPE-HLIVNVEDAE---SWLDKIDNAGSVFL 351 (431)
T ss_pred ---------------------------HC-CEEEEECCHHHHHHHHHhhChH-hheehhcCHH---HHHhhcCccceecc
Confidence 01 2345679999999999985322 3457788874 4666665 899999
Q ss_pred CCCCC--C-------CCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 365 NEGLI--S-------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 365 N~~~~--~-------~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
..++. . ++-+|- +|..+..|.-+...|++.-++
T Consensus 352 G~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~ 393 (431)
T PLN02926 352 GRWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTV 393 (431)
T ss_pred CCCCchhhhccccCcCcccCC-----CcceeecCCCcHHHhcceeeE
Confidence 76543 1 233443 455677777788888886654
|
|
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.26 Score=48.17 Aligned_cols=272 Identities=17% Similarity=0.077 Sum_probs=151.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhhhhccchhccCCeEEEecCCCcHH
Q 015249 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 111 (410)
Q Consensus 32 ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~ 111 (410)
-+..+.+.++.|.....+. .... ..+|...-.++.|+-.|++..|.-||. +.+...+||-.+|+.=|+--+|-..
T Consensus 58 ai~~a~~~I~~fh~~q~~~-~~~~--~~~Gv~~g~~~~Pi~rvG~YVPa~~pS-tvLM~~iPAkvAGV~~Iv~~TPp~~- 132 (368)
T PRK13769 58 AALEAAKSLEALYSRLKPP-EAVD--FYGGVLRSVFWKPVRRAALYVPARYVS-TLVMLAVPARAAGVEEIYVVTPPRG- 132 (368)
T ss_pred HHHHHHHHHHHHHHHhCCC-CeEe--cCCCeEEEEEEeeeeeeEEEeccchHH-HHHHhhccHhhcCCCeEEEeCCCCC-
Confidence 4555566665554433221 1111 125666677899999999999976664 4455678999999876653332211
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHHhccccceeeeec--cCCCcEEec
Q 015249 112 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLEL--GGNAPCIVF 189 (410)
Q Consensus 112 ~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~--gg~~~~iV~ 189 (410)
....+.-+...+|..+ +..-.|.+.-.++...-.||.|+=.|..-+..+=+...+ .+-+.+ |-.--+|+-
T Consensus 133 i~p~vL~aa~~~Gv~e----Iy~vGGAQAIAa~a~gt~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViA 204 (368)
T PRK13769 133 VTGELLAVAKELGVKG----VLAIGGPHGLAYAVFHMGVDMVAGPGGLYVQAAKYVLSQ----YVGIDGIEGPTELVVYA 204 (368)
T ss_pred CCHHHHHHHHHcCCCe----eecccCHHHHHHHhcCCCcCEEECCCcHHHHHHHHHHhC----CcCCCCcCCCcceEEEc
Confidence 2222333557777753 332224554445554447999888887765433222221 222222 333345555
Q ss_pred cCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHH
Q 015249 190 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 269 (410)
Q Consensus 190 ~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~ 269 (410)
+++|.+.++..++.-+=+.. ..+.++|..+ +++.+++.+++++. +.
T Consensus 205 D~a~p~~vAaDLLaQAEH~~-----~a~~iLvT~s--~~la~~V~~~v~~~---------------------------~~ 250 (368)
T PRK13769 205 EGVPPEVAVRGALAQLEHGP-----TSFAYLLSTD--AELLKAAEEIYRRE---------------------------RT 250 (368)
T ss_pred CCCCHHHHHHHHHHHhhcCC-----CCcEEEEECC--HHHHHHHHHHHHHH---------------------------HH
Confidence 56888777776665433322 2444555554 45555555543321 00
Q ss_pred HHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHHHHHhhcCC-CCcEEEEecCCHH
Q 015249 270 DAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTN-AGLAAYIFTNNLQ 348 (410)
Q Consensus 270 ~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~-~gl~~sv~s~d~~ 348 (410)
. . . +. ..++.++|++|+++++|..- -.|.. ++.
T Consensus 251 ----~-~-------~----~~-------------------------~~iivv~~leeai~~~N~~APEHLel--~~~--- 284 (368)
T PRK13769 251 ----S-S-------M----GP-------------------------LEVRKVAGVEEAVRFIDEIAPEHLEV--WGR--- 284 (368)
T ss_pred ----h-c-------C----CC-------------------------CeEEEECCHHHHHHHHHhhChHheEe--eCc---
Confidence 0 0 0 00 24577899999999999853 23333 332
Q ss_pred HHHHHHhhcc-eeEEEECCCCCC-------CCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 349 RTWRVSEALE-YGLVGVNEGLIS-------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 349 ~~~~~~~~~~-~g~v~iN~~~~~-------~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
+.+..+++ +|.|+++++... ++-+|- +|..+..|.-+...|++.-++.
T Consensus 285 --~~~~~~i~nAGsiFl~~p~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~t~~ 340 (368)
T PRK13769 285 --REVAYRVRNVGAVSVNMPSPYLDYVAGISHVLPT-----GGTARWRGIITPLTFMKPIGVA 340 (368)
T ss_pred --HHHHhhCCccCChhcCCchhhhccccCCCCcCCC-----CcceeccCCCcHHHcccceeEE
Confidence 22444655 899999764432 233443 3556667777788888766543
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0011 Score=74.87 Aligned_cols=104 Identities=13% Similarity=0.087 Sum_probs=78.2
Q ss_pred CCCCcceeEEeeeceEEEEEcCCCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 015249 58 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNA 137 (410)
Q Consensus 58 ~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~ 137 (410)
+++|++|.++..|+|+|+|+++.. ...+.++..+|++||.+|+..++.. ...+ +++|..+.+.+.-.
T Consensus 1175 GPTGE~N~l~l~pRg~vLcl~~~~---~~~~~Ql~Aala~Gn~~v~~~~~~~---~~~~------~~Lp~~v~~~v~~~- 1241 (1318)
T PRK11809 1175 GPTGERNTYTLLPRERVLCLADTE---QDALTQLAAVLAVGSQALWPDDALH---RALV------AALPAAVQARIQLA- 1241 (1318)
T ss_pred CCCCCcceeeccCCCcEEEeCCCH---HHHHHHHHHHHHhCCEEEEeCCchh---HHHH------HhccHHHHhHhhhc-
Confidence 557999999999999999998833 3678899999999999988644431 1112 55888887766321
Q ss_pred hhHHhHHhcCCCccEEEEeCcHHHHHHHHHHhccccceee
Q 015249 138 PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVS 177 (410)
Q Consensus 138 ~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~ 177 (410)
.........++.|.|.|.....+.+.++.+++..+++
T Consensus 1242 ---~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaIv 1278 (1318)
T PRK11809 1242 ---KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGPIV 1278 (1318)
T ss_pred ---cccccccCCccEEEEeCCHHHHHHHHHHHhcCCCCeE
Confidence 1223344669999999999999999999988865443
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=92.30 E-value=0.79 Score=46.75 Aligned_cols=107 Identities=15% Similarity=0.113 Sum_probs=74.5
Q ss_pred CCCCcceeEEeeeceEEEEEcCCCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 015249 58 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNA 137 (410)
Q Consensus 58 ~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~ 137 (410)
.+.|++++....|+|-|+++.+ +....+.+++.+|+.||.+++.+......... .+|..+-..+.-..
T Consensus 631 GptGErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~~aa~~~---------~l~~~v~~~~~~~~ 698 (769)
T COG4230 631 GPTGERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSGLAALLK---------DLPSAVASRIQVAK 698 (769)
T ss_pred CCcccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcchHHHHHH---------hchhhhhhheeecc
Confidence 4568999999999999999977 67788899999999999999976553221111 14544322222111
Q ss_pred hhHHhHHhcCCCccEEEEeCcHHHHHHHHHHhccccceeeeecc
Q 015249 138 PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG 181 (410)
Q Consensus 138 ~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~g 181 (410)
.+ ...-.++.+.|.|..+..+.+.+..+.+..|++.-.+
T Consensus 699 ----~~-~~~~~~~~vl~~gd~~~~r~~~~~iA~~~Gpiv~~~~ 737 (769)
T COG4230 699 ----DW-TADIPFDAVLFHGDSDRLRALCEAIAARDGPIVSVQG 737 (769)
T ss_pred ----ch-hhccceeeEEecCCHHHHHHHHHHHhcCCCCeEEeec
Confidence 22 2334578899999999989988877777666554443
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=88.46 E-value=0.068 Score=53.69 Aligned_cols=141 Identities=18% Similarity=0.112 Sum_probs=96.3
Q ss_pred CHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceeccee---eeeecCCHHHHHHHhhc
Q 015249 257 NKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVA---PLLCFKTEEEAIHMAND 333 (410)
Q Consensus 257 ~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl---~v~~~~~~~eai~~~n~ 333 (410)
+..++.+++..+.+.+.++...+...... +.|..+.++...+++...+.++= +++.. .........+.+.+.+.
T Consensus 80 ~~~~R~~~L~~~Adlie~~~~~lA~~E~~-d~GKp~~~a~~~Dl~~~~~~~ry--~ag~ad~~~~~~~~~~~~~~~yt~~ 156 (501)
T KOG2450|consen 80 DAAERGRLLRKLADLIEQDADVLAALEVL-DNGKPYPEALVSDLPPAIDCFRY--YAGWADKIHGSTIPTDGEFFAYTRR 156 (501)
T ss_pred CHHHHHHHHHHHHHHHHhhhHHHhhhccc-ccCCcchhhhhcCchhhhhHHHh--hccchhhcccccCCCCCceEEEecC
Confidence 56778888888888888888888887765 35677888887788777766553 33433 23345556677888888
Q ss_pred CCCCc--EEEEec-CCHHHHHHHHhhcceeEEEECCCCCCCC-------------CCCccCCC-CCCCCCCChHHHHHhh
Q 015249 334 TNAGL--AAYIFT-NNLQRTWRVSEALEYGLVGVNEGLISTE-------------VAPFGGVK-QSGLGREGSKYGMDEF 396 (410)
Q Consensus 334 ~~~gl--~~sv~s-~d~~~~~~~~~~~~~g~v~iN~~~~~~~-------------~~pfGg~~-~SG~g~~~g~~~l~~~ 396 (410)
.+.|. ..+.|. .=.-.+.+++-.|.+|+++||-+....| ++|=|=+. .+|.|..-|..-..++
T Consensus 157 eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~ 236 (501)
T KOG2450|consen 157 EPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHP 236 (501)
T ss_pred CcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCC
Confidence 99994 555665 3345578999999999999997654222 33433332 4577777776666665
Q ss_pred heee
Q 015249 397 LEIK 400 (410)
Q Consensus 397 ~~~k 400 (410)
--.|
T Consensus 237 dv~k 240 (501)
T KOG2450|consen 237 DVDK 240 (501)
T ss_pred CCce
Confidence 4444
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 410 | ||||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 1e-130 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-130 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-130 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 1e-124 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 1e-124 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 1e-123 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 2e-85 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 3e-81 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 1e-80 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 2e-80 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 1e-77 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 2e-77 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 1e-76 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 1e-76 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 2e-76 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 3e-76 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 3e-76 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 3e-74 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 1e-73 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 2e-70 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 2e-70 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 2e-70 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 3e-70 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 6e-70 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 7e-70 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 2e-69 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 2e-69 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 2e-69 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-68 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 1e-68 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 4e-68 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 6e-68 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 2e-67 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 4e-67 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 7e-67 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 8e-67 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 9e-67 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 1e-66 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 2e-66 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 2e-66 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 4e-66 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 5e-66 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 5e-66 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 2e-65 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-65 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 3e-65 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-64 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 4e-64 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 6e-64 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 6e-64 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 6e-63 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 6e-60 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 4e-58 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 8e-58 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 2e-51 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 6e-51 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 2e-50 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 4e-50 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 1e-49 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 4e-47 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 1e-46 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 2e-46 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 4e-46 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 5e-46 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 7e-46 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 2e-45 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 1e-44 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 7e-42 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 2e-41 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 3e-41 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 3e-41 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 5e-41 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 2e-40 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 5e-40 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 9e-39 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 1e-35 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 2e-34 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 5e-32 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 4e-30 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 1e-28 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 1e-28 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 1e-23 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 7e-23 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 1e-22 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-22 | ||
| 2vro_A | 532 | Crystal Structure Of Aldehyde Dehydrogenase From Bu | 6e-12 | ||
| 2y53_A | 534 | Crystal Structure Of E257q Mutant Of The Box Pathwa | 6e-12 | ||
| 2y52_A | 534 | Crystal Structure Of E496a Mutant Of The Box Pathwa | 6e-12 | ||
| 2y51_A | 534 | Crystal Structure Of E167a Mutant Of The Box Pathwa | 1e-11 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 1e-11 | ||
| 2y5d_A | 534 | Crystal Structure Of C296a Mutant Of The Box Pathwa | 9e-11 | ||
| 1eyy_A | 510 | Crystal Structure Of The Nadp+ Dependent Aldehyde D | 1e-06 |
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532 | Back alignment and structure |
|
| >pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
| >pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde Dehydrogenase From Vibrio Harveyi. Length = 510 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 745 bits (1925), Expect = 0.0
Identities = 223/374 (59%), Positives = 290/374 (77%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ Y A FIE++AEE KR+YG+ IP D+RL V+KQP+GV AITPWNFP AMITRK
Sbjct: 107 EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKA 166
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALA GCT+V+KP+ TP +ALA AELA++AG+P GV NVV G+A +G+ L ++P VR
Sbjct: 167 GPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVR 226
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
K++FTGST +G++LM A +KKVSLELGGNAP IVFDDADL+ AV GALA+KFRN+GQ
Sbjct: 227 KLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQ 286
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANR+ VQ+G+Y++FA+ +A+ L +GDG GV GPLI++ A+ KVE + DA
Sbjct: 287 TCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADA 346
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
+ KGA+V+ GG+ H G F++PT+L +V + VS+EE FGP+APL FK E + I A
Sbjct: 347 LEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQA 406
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDT GLAAY + +L R +RV EALEYG+VG+N G+IS EVAPFGG+K SGLGREGSKY
Sbjct: 407 NDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKY 466
Query: 392 GMDEFLEIKYVCLG 405
G++++LEIKY+C+G
Sbjct: 467 GIEDYLEIKYMCIG 480
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 743 bits (1920), Expect = 0.0
Identities = 224/374 (59%), Positives = 295/374 (78%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ Y A FIE++AEE KRV G+ +P ++R+ V+K+P+GV AITPWNFP AMI RKV
Sbjct: 110 EIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKV 169
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALA GC +VVKP+E TP +ALA A LA +AG+P GV++VV+G+ IG + ++P VR
Sbjct: 170 GPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVR 229
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
K++FTGSTAVG+ LMA +A TVKK++LELGGNAP IVFDDADL+ AV GA+A+K+RN+GQ
Sbjct: 230 KLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQ 289
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVC NR V E +Y+ FAD + AV LKVG G G GPLIN+AA++KVE+ + DA
Sbjct: 290 TCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADA 349
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
++KGA ++ GG+RH+LG F+EPTVL+ VK +M V++EE FGP+APL F +EEE + +A
Sbjct: 350 LAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLA 409
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDT GLAAY+++ ++ R WRV+EALEYG+VG+N GLIS EVAPFGGVKQSGLGREGS Y
Sbjct: 410 NDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHY 469
Query: 392 GMDEFLEIKYVCLG 405
G+D+++ IKY+C+
Sbjct: 470 GIDDYVVIKYLCVA 483
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 738 bits (1909), Expect = 0.0
Identities = 236/380 (62%), Positives = 295/380 (77%), Gaps = 4/380 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ Y A F+E+++EEA+RVYG+II DRR VLKQP+GVA ITPWNFP AMITRKV
Sbjct: 108 EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV 167
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV---MGNAPDIGDALLTSP 148
G ALA GCTVVVKP+E TP +ALA AELA QAGIP GV NV+ NA ++G+A+ T P
Sbjct: 168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDP 227
Query: 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
V KI+FTGST GK L+ AA +VK+VS+ELGG AP IVFD A+++ AV GA+A+KFRN
Sbjct: 228 LVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRN 287
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAV-KNLKVGDGFGEGVVQGPLINKAALEKVETF 267
+GQTCVC+N+ LVQ GI++ F AF++A+ KNL+VG+GF EG QGPLIN+ A+EKVE
Sbjct: 288 TGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQ 347
Query: 268 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
V DAVSKGA V+ GG+RH LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEA
Sbjct: 348 VNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEA 407
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 387
I +AN + GLA Y ++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGRE
Sbjct: 408 IAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGRE 467
Query: 388 GSKYGMDEFLEIKYVCLGDM 407
GSKYG+DE+LE+KYVC G +
Sbjct: 468 GSKYGIDEYLELKYVCYGGL 487
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 735 bits (1900), Expect = 0.0
Identities = 234/374 (62%), Positives = 290/374 (77%), Gaps = 2/374 (0%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV Y A FIE++AEEAKRVYG+ IPA +RL V++QPVGV AITPWNFP AMITRK
Sbjct: 130 EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKA 189
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PALA GCT++V+P++ TPLTALA LA +AGIP GV+ +V G A +IG L ++ VR
Sbjct: 190 APALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVR 249
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
K++FTGST VG+ LMA A T+K++SLELGGNAP IVFDDADL+ AV+GA+ +K+RN+GQ
Sbjct: 250 KLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQ 309
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANR+ VQ G+Y+KFA+ + VK LKVG+G GVV GP+I + A+ KV+ +EDA
Sbjct: 310 TCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDA 369
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
VSKGAK++ GG+ LG F+EP +L+ V S+MLV++EE FGP+APL F TEEE I A
Sbjct: 370 VSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQA 427
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDT GLAAY +T N R RVSEALEYG+VG N GLIS EVAPFGGVKQSGLGREGSKY
Sbjct: 428 NDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKY 487
Query: 392 GMDEFLEIKYVCLG 405
G++E+LE KY+C
Sbjct: 488 GIEEYLETKYICSA 501
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 735 bits (1900), Expect = 0.0
Identities = 174/378 (46%), Positives = 231/378 (61%), Gaps = 1/378 (0%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EVDY A F ++ A+ + IP D V +PVGV G I PWNFP+ MI +K+
Sbjct: 109 EVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKL 168
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
ALA GC V+KP+ TPLT +A + + +P G+VN+VMG A IG L V
Sbjct: 169 SAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVP 228
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
++FTGST VG+KL+ A VKK++LELGGNAP IVFDDADL A + +A KFR GQ
Sbjct: 229 MLSFTGSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQ 288
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANR+ V E + + F ++ V + VGDG +G+ GPLINK +KV+ ++DA
Sbjct: 289 TCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDA 348
Query: 272 VSKGAKVLLGGRRHSLGM-TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
+ KGA ++ G + LG F+ PTV+ V EM +EE FGP+ P+ F+TEEE I
Sbjct: 349 LDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDA 408
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 390
NDT GLA+Y+FT + +R RV+ L +G VG N G T APFGG+K SG+GREG
Sbjct: 409 GNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGL 468
Query: 391 YGMDEFLEIKYVCLGDMN 408
G+ EF+E + V G
Sbjct: 469 EGLFEFVEAQTVPRGFAE 486
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 731 bits (1889), Expect = 0.0
Identities = 149/381 (39%), Positives = 218/381 (57%), Gaps = 4/381 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EVD A FI++ + A + G+I+P+ D ++++ K P GV IT WNFPLA+ RK+
Sbjct: 110 EVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKI 169
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPAL G T+V+KP++ TPL +A +AG+P GV+NV+ G +G L SP +
Sbjct: 170 GPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITK 229
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
IT TGST GK++ +A + V LELGG AP +V DDADL+ A AL +F N GQ
Sbjct: 230 MITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQ 289
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C C R+ V +Y++F F VK LKVGD GP N+ ++ ++ V +A
Sbjct: 290 VCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEA 349
Query: 272 VSKGAKVLLGGRRHSL----GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
+ +GA V GG+ ++ G +YEPTVL +VK + +V EE FGP+ P++ + E+A
Sbjct: 350 IKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQA 409
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 387
I ND+ GL+AY+ T + + LE G V +N G+ G KQSG G E
Sbjct: 410 IEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGE 469
Query: 388 GSKYGMDEFLEIKYVCLGDMN 408
K+G++++LE K V + +
Sbjct: 470 DGKFGLEQYLEKKTVYINEAE 490
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 722 bits (1867), Expect = 0.0
Identities = 157/375 (41%), Positives = 231/375 (61%), Gaps = 1/375 (0%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV + A +I++ AE A+R GEII + P + + K+ +GV I PWNFP +I RK+
Sbjct: 104 EVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKM 163
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PAL G T+V+KPSEFTP A+A A++ + G+P GV N+V+G +G L +P+V
Sbjct: 164 APALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVA 223
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
++ TGS + G+K+MA AA + KV LELGG AP IV DDADL +AV + ++ NSGQ
Sbjct: 224 MVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQ 283
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG-VVQGPLINKAALEKVETFVED 270
C CA RV VQ+GIY++F + +A++ ++ G+ + GPLIN AALE+VE V
Sbjct: 284 VCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVAR 343
Query: 271 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
AV +GA+V GG+ +Y PT+L +V+ EM + EE FGPV P++ F T E+AI M
Sbjct: 344 AVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISM 403
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 390
AND++ GL + I+T NL + + L++G +N G ++SG+G K
Sbjct: 404 ANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGK 463
Query: 391 YGMDEFLEIKYVCLG 405
+G+ E+L+ + V L
Sbjct: 464 HGLHEYLQTQVVYLQ 478
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 674 bits (1742), Expect = 0.0
Identities = 149/379 (39%), Positives = 215/379 (56%), Gaps = 14/379 (3%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV+ + A K E+IP+ DR +F ++PVG+ GAITP+NFPL + K+
Sbjct: 94 EVERSIGTFKLAAFYVKEHRDEVIPS--DDRLIFTRREPVGIVGAITPFNFPLNLSAHKI 151
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTS 147
PA+A G +V PS PL + A++ A +P GV N++ G +GD ++ +
Sbjct: 152 APAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVN 211
Query: 148 PQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 207
+V I+FTGS+ VG+ + A KK++LELGG P IV DADLN AVN + F
Sbjct: 212 EKVNMISFTGSSKVGELITKKAG--FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFI 269
Query: 208 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 267
+GQ C+ +LV E I +KF + F K L VG+ E GPLI+ E VE
Sbjct: 270 YAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKV 329
Query: 268 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
VE A+ +G K+LLGG+R + PT+L V + ++ + E F PV P++ EEE
Sbjct: 330 VEKAIDEGGKLLLGGKRDK---ALFYPTIL-EVDRDNILCKTETFAPVIPIIRT-NEEEM 384
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE-GLISTEVAPFGGVKQSGLGR 386
I +AN T GL + IFTN++ ++ + +E LE+G V +N+ L + PFGGVK+SGLGR
Sbjct: 385 IDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGR 444
Query: 387 EGSKYGMDEFLEIKYVCLG 405
EG KY M+E IK + +
Sbjct: 445 EGVKYAMEEMSNIKTIIIS 463
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 675 bits (1743), Expect = 0.0
Identities = 129/380 (33%), Positives = 193/380 (50%), Gaps = 12/380 (3%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIP-----ATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86
EV A I A+EA R+ GE + + V ++P+GV AI+P+N+P+ +
Sbjct: 109 EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNL 168
Query: 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLT 146
K+ PAL G TVV KP+ L+ + E AG P G++ VV G IGD L+
Sbjct: 169 AAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVE 228
Query: 147 SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKF 206
P + ITFTG T G+++ A + V LELGG P IV DDADL + + ++ F
Sbjct: 229 HPGIDMITFTGGTTTGERISEKA--KMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAF 286
Query: 207 RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVET 266
SGQ C RV VQ+ + ++ + V+ L VG + P+I++ + ++
Sbjct: 287 SYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPE-DDADITPVIDEKSAAFIQG 345
Query: 267 FVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326
++DA+ GA +L G +R PT+L +V M V+ EE FGPV P++ K E
Sbjct: 346 LIDDALENGATLLSGNKRQG---NLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANE 402
Query: 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG 385
AI ++N ++ GL A IFT + R + + LE G V +N + PF GVK+SGLG
Sbjct: 403 AISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLG 462
Query: 386 REGSKYGMDEFLEIKYVCLG 405
+G K + + L
Sbjct: 463 VQGIKPSLLSMTRERVTVLN 482
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 672 bits (1737), Expect = 0.0
Identities = 126/382 (32%), Positives = 220/382 (57%), Gaps = 6/382 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYG-EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 90
E++ ++ + G + +P+ + + + + P+GV +I+P+NFP+ + R
Sbjct: 104 ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRS 163
Query: 91 VGPALACGCTVVVKPSEFTPLTALAA-AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQ 149
+ PA+A G +VV KP T ++ A+ AG+P GV+NV++ + +IGD +LT+P
Sbjct: 164 IAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPI 223
Query: 150 VRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS 209
R I+FTGSTAVG+ + A K+++LELGGN P V DAD++ AV+ A+ KF +
Sbjct: 224 PRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQ 283
Query: 210 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 269
GQ C+ NR++V + +Y++F + F+ VK L GD V GPLIN+ +EK +E
Sbjct: 284 GQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIE 343
Query: 270 DAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 329
A + G ++ + G+R P V + +++ E+F P+A ++ +++EAI
Sbjct: 344 QAKTDGIELAVEGKRVG---NVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAID 400
Query: 330 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREG 388
MANDT GL++ +FT++L++ + + ++ G+ VN+ ++ FGG K SG+GR G
Sbjct: 401 MANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFG 460
Query: 389 SKYGMDEFLEIKYVCLGDMNRK 410
+ + ++EF K++ + RK
Sbjct: 461 NPWVVEEFTVTKWISIQKQYRK 482
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 670 bits (1730), Expect = 0.0
Identities = 128/380 (33%), Positives = 197/380 (51%), Gaps = 12/380 (3%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIP-----ATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86
EV A+ I + AEE R+ GE++ A + V ++PVG+ AI+P+N+P+ +
Sbjct: 100 EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNL 159
Query: 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLT 146
K+ PAL G + KP ++ L AE +AG+P GV N + G +IGD ++
Sbjct: 160 AGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVE 219
Query: 147 SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKF 206
V I FTGST +G+++ A ++ + LELGG IV +DADL + +A F
Sbjct: 220 HQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAF 277
Query: 207 RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVET 266
SGQ C RVLV E + ++ + + V L +G+ + PLI+ + + VE
Sbjct: 278 GYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPE-DDADITPLIDTKSADYVEG 336
Query: 267 FVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326
+ DA KGA L +R P + V ++M ++ EE FGPV P++ + EE
Sbjct: 337 LINDANDKGATALTEIKREG---NLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEE 393
Query: 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLG 385
AI ++N + GL A IFTN+ R + ++E LE G V +N T+ PF G K+SG G
Sbjct: 394 AIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAG 453
Query: 386 REGSKYGMDEFLEIKYVCLG 405
+G KY ++ +K V
Sbjct: 454 IQGVKYSIEAMTTVKSVVFD 473
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 660 bits (1704), Expect = 0.0
Identities = 124/382 (32%), Positives = 199/382 (52%), Gaps = 13/382 (3%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLP----DRRLFVLKQPVGVAGAITPWNFPLAMI 87
EV + + K++ G+ IP + V ++P+GV AITP+N+PL
Sbjct: 115 EVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDA 174
Query: 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTS 147
K+ + G VVVKPS PL A A + L AG PP + ++ + ++
Sbjct: 175 VNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVAD 233
Query: 148 PQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 207
+V ++FTGST VG++++ VK+ +ELGG P IV +DADL++A + +
Sbjct: 234 DRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYS 291
Query: 208 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 267
+GQ C VL + +Y K + +K + +L+VGD V GPLI+ +A++++
Sbjct: 292 YAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAA 351
Query: 268 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVL---SNVKSEMLVSREEVFGPVAPLLCFKTE 324
+EDAV KG +VL GGRR LG T+ +PT + ++ +M++ + EVF PVA + K
Sbjct: 352 IEDAVEKGGRVLAGGRR--LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDL 409
Query: 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG-LISTEVAPFGGVKQSG 383
++AI +AN GL A +F ++ + R LE G + +N+ PFGG K+SG
Sbjct: 410 DQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSG 469
Query: 384 LGREGSKYGMDEFLEIKYVCLG 405
+ REG Y ++ K +
Sbjct: 470 VFREGIGYAVEAVTAYKTIVFN 491
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 650 bits (1680), Expect = 0.0
Identities = 136/377 (36%), Positives = 214/377 (56%), Gaps = 7/377 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ + A RV+G I P+ P + V + GV G I+PWNFPL + R V
Sbjct: 110 EITLAGNITKESASFPGRVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSV 169
Query: 92 GPALACGCTVVVKPSEFTPLTALA-AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQV 150
PALA G VV+KP+ TP+T A + +AG+P GV++ V G +IGD +T
Sbjct: 170 APALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVP 229
Query: 151 RKITFTGSTAVGKKLM--AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
+ I+FTGST VG+++ A G +K V+LELGGNAP +V DAD++ A A F +
Sbjct: 230 KLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLH 289
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 268
GQ C+ NRV+V ++++F + F +AVKN+ GD EG + GP+IN + L ++ +
Sbjct: 290 QGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKI 349
Query: 269 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 328
E A +GA V + G P V S+V S+M ++REE+FGP+ +L E A
Sbjct: 350 ELAKKEGATVQVEGPIEG---RLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAA 406
Query: 329 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGRE 387
+AN ++ GL+A +++ ++ R + + ++ G+V +N+ ++ E FGG K SGLGR
Sbjct: 407 ELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRF 466
Query: 388 GSKYGMDEFLEIKYVCL 404
+ ++EF +++ +
Sbjct: 467 NGDWAIEEFTTDRWIGI 483
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 612 bits (1581), Expect = 0.0
Identities = 110/379 (29%), Positives = 183/379 (48%), Gaps = 8/379 (2%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV ++ ++ + G I+P+ L PVG+ G IT +NFP+A+
Sbjct: 119 EVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNN 178
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTS 147
A+ CG + K + T L ++A ++ + +P + ++ G DIG A+
Sbjct: 179 AIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKD 237
Query: 148 PQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 207
+V ++FTGST VGK++ + LELGGN I F+DADL++ V AL A
Sbjct: 238 ERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVG 297
Query: 208 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 267
+GQ C A R+ + E I+++ + KA ++VG+ + V+ GPL K A+
Sbjct: 298 TAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGA 357
Query: 268 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
VE+A +G V+ GG+ + EPT+++ + + ++ E F P+ + F+ EEE
Sbjct: 358 VEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEV 417
Query: 328 IHMANDTNAGLAAYIFTNNLQR--TWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGL 384
N+ GL++ IFT +L R W + + G+V VN E+ FGG K +G
Sbjct: 418 FAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGG 477
Query: 385 GREGSKYGMDEFLEIKYVC 403
GRE +++
Sbjct: 478 GRESGSDAWKQYMRRSTCT 496
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 601 bits (1553), Expect = 0.0
Identities = 114/371 (30%), Positives = 173/371 (46%), Gaps = 7/371 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV + + + GE L D + +P GV P+NFP + +
Sbjct: 102 EVTSMVNKVAISVQAFRERTGEKSG-PLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHI 160
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PAL G VV KPSE TP A + +QAG+P GV+N+V G + G AL +
Sbjct: 161 VPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLD 219
Query: 152 KITFTGSTAVGKKLMAGAAG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 210
+ FTGS+ G L + G K ++LE+GGN P +V + ADL+ AV + + F ++G
Sbjct: 220 GLFFTGSSRTGNLLHSQFGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAG 279
Query: 211 QTCVCANRVLVQEGIY-EKFADAFSKAVKNLKVGDGFGEGVVQ-GPLINKAALEKVETFV 268
Q C CA R+LV +G + + L+VG + G +I+ +A E +
Sbjct: 280 QRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQ 339
Query: 269 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 328
E + KGA+ LL + G P +L +V + EE FGP+ ++ + AI
Sbjct: 340 EHLIGKGAQPLLAMTQPIDGAALLTPGIL-DVSAVAERPDEEFFGPLLQVIRYSDFAAAI 398
Query: 329 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGRE 387
AN T GLAA + +++ +R + G+V N+ L + APFGG+ SG R
Sbjct: 399 REANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNHRP 458
Query: 388 GSKYGMDEFLE 398
+ Y D
Sbjct: 459 SAYYAADYCAY 469
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 594 bits (1534), Expect = 0.0
Identities = 132/376 (35%), Positives = 202/376 (53%), Gaps = 2/376 (0%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV A ++YAE + P + +++ + +P+GV AI PWNFPL + R
Sbjct: 89 EVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGA 147
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
P L G + ++K + A A + +AG P GV V N + ++ P++
Sbjct: 148 VPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNANNEGVSQ-MINDPRIA 206
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
+T TGS G + A A +KK LELGG+ P IV +DADL +AV A+A +++N+GQ
Sbjct: 207 AVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQ 266
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C A R +V+EGI + F D F A LK+GD E GP+ +++ V+ +
Sbjct: 267 VCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQAS 326
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
V++GA++LLGG + + +Y TVL++V +M R+E+FGPVA + K A+ +A
Sbjct: 327 VAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALA 386
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
ND+ GL+A IFT + ++ LE G V +N S FGGVK+SG GRE S +
Sbjct: 387 NDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHF 446
Query: 392 GMDEFLEIKYVCLGDM 407
G+ EF ++ V +
Sbjct: 447 GLHEFCNVQTVWKNRV 462
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 586 bits (1514), Expect = 0.0
Identities = 113/379 (29%), Positives = 187/379 (49%), Gaps = 2/379 (0%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV+ +YA+ + + + LKQ GV A PWNFPL + R
Sbjct: 86 EVELCVSICNYYADHGPEMLKPTKLNS-DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVF 144
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
P G +++K + P +A A++ +AG P G + + + + D ++ P+++
Sbjct: 145 APNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQ 203
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
+ TGS G + A +KK ++ELGGN IV DDAD V N A+ N GQ
Sbjct: 204 GVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQ 263
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C + R++V++ Y++ NLK GD P+ ++ A EK+E V++A
Sbjct: 264 VCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEA 323
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
+ GAKV F+ PT+L+++ + V +EVFGP+A + + + AI +A
Sbjct: 324 IDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLA 383
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
ND++ GL + + +++ R +VS +E G+ +N I++ PFGG+K+SG GRE S
Sbjct: 384 NDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGL 443
Query: 392 GMDEFLEIKYVCLGDMNRK 410
G+ F+ V N +
Sbjct: 444 GLMAFVNEHLVIDVTKNNQ 462
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 505 bits (1302), Expect = e-178
Identities = 156/373 (41%), Positives = 217/373 (58%), Gaps = 1/373 (0%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ + A + A +A+ + G+ DR VL++PVGV G ITPWNFP + + +V
Sbjct: 123 EIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERV 182
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
A+ GCTVV+KPSEFT T++ AELA +AGIP GV NVV G G L P V
Sbjct: 183 PWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVD 242
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
+ FTGS VG KL AA TVK+V LELGG P IVF DADL+ A +G + N+GQ
Sbjct: 243 MVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQ 302
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C+ +R+LVQEGI + + + + GD E G +I++A EKV ++V
Sbjct: 303 CCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAG 362
Query: 272 VSKGAKVLLGGRRHSLGM-TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
++ GA++LLGG R +Y PTV + V +M ++REE+FGPV L FKT +EA+ +
Sbjct: 363 ITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVAL 422
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 390
AN T GL+A +++ NL+ + + G +N + T P GG K+SGLGRE +
Sbjct: 423 ANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGR 482
Query: 391 YGMDEFLEIKYVC 403
YG DE+ + K V
Sbjct: 483 YGFDEYSQFKGVH 495
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 501 bits (1293), Expect = e-176
Identities = 148/375 (39%), Positives = 231/375 (61%), Gaps = 4/375 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
++D ++A A + GE+I + +PD ++K+PVGV ITPWN+PL + K+
Sbjct: 132 DMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKI 191
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PALA GC++V+KPSE TPLT + EL + G P G +N+++G ++GD + +V
Sbjct: 192 APALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVD 251
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
++FTG GK +M AA V ++LELGG P I+FDDAD +AV+ AL + ++GQ
Sbjct: 252 LVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQ 311
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C +R+LVQ I +KF A VK +K+G+GF GP+I+ K+E++++ A
Sbjct: 312 VCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVA 371
Query: 272 VSKGAKVLLGGRRHSLGMT----FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
++GA + +GG+R F+EPTV++N + M + +EEVFGPV + F+TE+EA
Sbjct: 372 KAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEA 431
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 387
I +AND+ GLA +F+ ++ + RV+ L+ G V +N+ AP+GG KQSG+GRE
Sbjct: 432 IQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRE 491
Query: 388 GSKYGMDEFLEIKYV 402
K G++E+L K++
Sbjct: 492 LGKEGLEEYLVSKHI 506
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 495 bits (1277), Expect = e-174
Identities = 163/377 (43%), Positives = 234/377 (62%), Gaps = 5/377 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGE-IIPATLPDRRLF--VLKQPVGVAGAITPWNFPLAMIT 88
++D A E+YA+ A+++ P +LP VL++P+GV G ITPWN+P+ M T
Sbjct: 110 DIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMAT 169
Query: 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSP 148
KV PALA GC ++KPSE LT L E+ + G+PPGV+N++ G P+ G L T P
Sbjct: 170 WKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHP 229
Query: 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
V K+ FTGS+A G K+M AA VK VSLELGG +P +VF+D DL+ A A+ F
Sbjct: 230 DVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWT 289
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 268
+GQ C +R+++ E I +F + K +KN+K+ D EG GP++++ EK+ FV
Sbjct: 290 NGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFV 349
Query: 269 EDAVSKGAKVLLGGRRHSLGMT--FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326
+A S+GA +L GG R F EPT++++V + M + REEVFGPV + F TEEE
Sbjct: 350 SNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEE 409
Query: 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGR 386
AI +ANDT GL A + +N+L+R RV++A + G+V VN AP+GGVK+SG GR
Sbjct: 410 AIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGR 469
Query: 387 EGSKYGMDEFLEIKYVC 403
E ++G+D +L +K V
Sbjct: 470 ELGEWGLDNYLSVKQVT 486
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 490 bits (1263), Expect = e-172
Identities = 143/373 (38%), Positives = 209/373 (56%), Gaps = 2/373 (0%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ F+A A+ + G L + + P+GV +I PWN+PL M K+
Sbjct: 121 EIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 180
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PALA G VV+KPSE TPLTAL AELA P GVVN++ G +GD L P+VR
Sbjct: 181 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVR 239
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
++ TGS A G+ +++ A ++K+ +ELGG AP IVFDDAD+ V G + N+GQ
Sbjct: 240 MVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQ 299
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C A R+ Q+GIY+ + AV LK G E GPL + A LE+V VE+A
Sbjct: 300 DCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEA 359
Query: 272 VSKG-AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
+ G KV+ GG + +Y PT+L+ + + ++EVFGPV + F EE+ ++
Sbjct: 360 KATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNW 419
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 390
AND+ GLA+ ++T ++ R RVS L+YG VN + P GG K SG G++ S
Sbjct: 420 ANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSL 479
Query: 391 YGMDEFLEIKYVC 403
YG++++ +++V
Sbjct: 480 YGLEDYTVVRHVM 492
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 488 bits (1260), Expect = e-172
Identities = 137/373 (36%), Positives = 211/373 (56%), Gaps = 2/373 (0%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ F+A + ++ LP + + P+G+ G+I PWN+PL M+ K+
Sbjct: 123 ELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKL 182
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PA+ G TVV KPSE TPLTAL A L +P GVVNV+ G +G+AL+ P+V
Sbjct: 183 APAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVG 241
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
++ TG A GKK++A AA TVK+ LELGG AP IV+ DADL VNG + N+GQ
Sbjct: 242 MVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQ 301
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C A R+ + GIYEK + AV ++ GPLI++ ++V +FVE A
Sbjct: 302 DCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERA 361
Query: 272 VSKG-AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
+ ++ GGR S F++PTV++ E + R EVFGPV + F +++A+
Sbjct: 362 ADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAW 421
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 390
AND++ GLA+ ++T ++ + R + L+YG +N + T P GG+KQSG G++ S
Sbjct: 422 ANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSV 481
Query: 391 YGMDEFLEIKYVC 403
Y ++++ ++++
Sbjct: 482 YALEDYTAVRHIM 494
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 488 bits (1258), Expect = e-171
Identities = 162/374 (43%), Positives = 223/374 (59%), Gaps = 2/374 (0%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
++ K + + A A ++ G IP + + +PVGV G I PWNFPL M K+
Sbjct: 122 DLGGCIKTLRYCAGWADKIQGRTIPMD-GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKI 180
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPAL+CG TVVVKP+E TPLTAL L +AG PPGVVN+V G P G A+ + V
Sbjct: 181 GPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVD 240
Query: 152 KITFTGSTAVGKKLMAGAA-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 210
K+ FTGST VGK + A +K+VSLELGG +PCIVF DADL+ AV A F + G
Sbjct: 241 KVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQG 300
Query: 211 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 270
Q C+ A+R+ V+E IY++F + K +G+ GV QGP I+K EK+ +E
Sbjct: 301 QCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIES 360
Query: 271 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
+GAK+ GG F +PTV S+V +M +++EE+FGPV ++ FK+ ++ I
Sbjct: 361 GKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKR 420
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 390
AN+T GL+A IFTN++ + VS AL+ G V VN + + PFGG K SG GRE +
Sbjct: 421 ANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGE 480
Query: 391 YGMDEFLEIKYVCL 404
YG E+ E+K V +
Sbjct: 481 YGFHEYTEVKTVTI 494
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 486 bits (1253), Expect = e-170
Identities = 155/385 (40%), Positives = 212/385 (55%), Gaps = 10/385 (2%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
++D + IE+YA A + G+ I + ++P+GV I WN+P + K
Sbjct: 118 DIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKC 176
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PALACG VV KPS TP+T + AE+ +AG+P G+VNVV G + G L P V
Sbjct: 177 APALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVA 235
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
K++FTGS GKK+M +A TVK V+LELGG +P ++F D +L AV GAL A F GQ
Sbjct: 236 KVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQ 295
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C RV VQ I +F + K K + VGD G LI+K L+KV FV A
Sbjct: 296 VCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQA 355
Query: 272 VSKGAKVLLGGRRHSLGMT------FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325
+GA+VL GG + F P VL N + +M +EE+FGPV +L F TEE
Sbjct: 356 KKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEE 415
Query: 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG 385
E + AN+T GLA+ +FT ++ R RV+ LE G +N IS PFGG K SG G
Sbjct: 416 EVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFG 475
Query: 386 REGSKYGMDEFLEIKYVC--LGDMN 408
RE + +D + ++K V +GD++
Sbjct: 476 RENGQATVDYYSQLKTVIVEMGDVD 500
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 483 bits (1246), Expect = e-169
Identities = 153/374 (40%), Positives = 221/374 (59%), Gaps = 2/374 (0%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
++D K + +YA A + +G+ IP D + +PVGV G I PWNFPL M K+
Sbjct: 121 DLDMVLKCLRYYAGWADKYHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 179
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALA G VV+K +E TPLTAL A L +AG PPGVVN+V G P G A+ + V
Sbjct: 180 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVD 239
Query: 152 KITFTGSTAVGKKLMAGAAGT-VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 210
K+ FTGST +G+ + A + +K+V+LELGG +P I+ DAD++ AV A A F N G
Sbjct: 240 KVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQG 299
Query: 211 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 270
Q +R VQE IY++F + K+ VG+ F QGP +++ +K+ ++
Sbjct: 300 QCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINT 359
Query: 271 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
+GAK+L GG + F +PTV +V+ M +++EE+FGPV +L FKT EE +
Sbjct: 360 GKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGR 419
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 390
AN++ GLAA +FT +L + +S+AL+ G V VN + +PFGG K SG GRE +
Sbjct: 420 ANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGE 479
Query: 391 YGMDEFLEIKYVCL 404
YG+ + E+K V +
Sbjct: 480 YGLQAYTEVKTVTV 493
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 480 bits (1237), Expect = e-168
Identities = 145/383 (37%), Positives = 214/383 (55%), Gaps = 9/383 (2%)
Query: 32 EVDYGAKFIEFYAEEAK-RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 90
+ GA EF+ A + G+ IP L + + P+GV I WN+P + K
Sbjct: 113 DPTSGADAFEFFGGIAPSALNGDYIP--LGGDFAYTKRVPLGVCVGIGAWNYPQQIACWK 170
Query: 91 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQV 150
PAL G +V KPSE TPL AL AE+ ++AG+P G+ NV+ G+ G L+ P V
Sbjct: 171 AAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRD-TGPLLVNHPDV 229
Query: 151 RKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 210
K++ TGS G+K+ A AAG +K V++ELGG +P IVFDDAD+ AV GA+ F +SG
Sbjct: 230 AKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSG 289
Query: 211 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 270
Q C RV VQ+ +F + + + + +GD GPL++KA EKV +++E
Sbjct: 290 QVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEK 349
Query: 271 AVSKGAKVLLGGRRHSLGMT---FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
++GA ++ GG + + +PTV ++V +M ++REE+FGPV +L F E+E
Sbjct: 350 GKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEV 409
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 387
+ AN T GLA +FT +L R RV + LE G + +N + PFGG KQSG GRE
Sbjct: 410 LARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRE 469
Query: 388 GSKYGMDEFLEIKYVC--LGDMN 408
S ++ + E+K V G ++
Sbjct: 470 NSAAALEHYSELKTVYVSTGKVD 492
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 480 bits (1237), Expect = e-168
Identities = 145/379 (38%), Positives = 216/379 (56%), Gaps = 6/379 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRL---FVLKQPVGVAGAITPWNFPLAMIT 88
V + ++A ++ G IP K+PVGV G + PWN+PL M++
Sbjct: 137 HVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196
Query: 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSP 148
K LA G TVV+KP++ TPLTAL AEL L+AGIP GVVN++ G+ +G L P
Sbjct: 197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHP 256
Query: 149 QVRKITFTGSTAVGKKLMAGAA-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 207
VRKI FTGST VGK +M A VKKVSLELGG +P I+F D DLN AV +++ F
Sbjct: 257 DVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFF 316
Query: 208 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 267
N G+ C+ A R+ V+E I+ +F + V+ +K+G+ GP ++A L K+ +
Sbjct: 317 NKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEY 376
Query: 268 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE--E 325
+ V +GA ++ GG + F++PTV ++V+ M +++EE FGP+ + F +
Sbjct: 377 CQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVD 436
Query: 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG 385
+ AN T GLA+ +FT ++ + VS+ L+ G V +N + APFGG KQSG G
Sbjct: 437 AVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFG 496
Query: 386 REGSKYGMDEFLEIKYVCL 404
++ + ++E+L IK V
Sbjct: 497 KDLGEAALNEYLRIKTVTF 515
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 479 bits (1235), Expect = e-168
Identities = 148/382 (38%), Positives = 218/382 (57%), Gaps = 11/382 (2%)
Query: 32 EVDYGAKFIEFYAEEA-KRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 90
+V A+ FYAE A + P D + ++ P G G ITPWN PL + T +
Sbjct: 124 QVARAAENFAFYAEYAEHAMEDRTFPVD-RDWLYYTVRVPAGPVGIITPWNAPLMLSTWR 182
Query: 91 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQV 150
+ PALA G TVV+KP+E++P TA AE+ +A +PPGV N+V G + G AL+ P V
Sbjct: 183 IAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLV 242
Query: 151 RKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 210
+T TG T GK +M AA +K++S ELGG +P +VF DADL A++ + F +G
Sbjct: 243 PLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNG 302
Query: 211 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 270
+ C ++R+LV+E I+E F + + ++VG GPLI+ L++V +VE
Sbjct: 303 ERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEA 362
Query: 271 AVSKGAKVLLGGRRHSLGMT--------FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322
+GA++L+GG R + PTV ++ M +++EE+FGPV + FK
Sbjct: 363 GKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFK 421
Query: 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQS 382
EEEA+ ANDT GLAAY+FT +L+R R++ LE G+V +N + PFGGVK S
Sbjct: 422 DEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGS 481
Query: 383 GLGREGSKYGMDEFLEIKYVCL 404
G REG Y +D + ++K + L
Sbjct: 482 GDRREGGTYALDFYTDLKTIAL 503
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 477 bits (1230), Expect = e-167
Identities = 143/407 (35%), Positives = 217/407 (53%), Gaps = 11/407 (2%)
Query: 1 MYRVWEERKQKMLYLRLLMRLILGASSLLLREVD--YGAKFIEFYAEEAKRVYGEIIPAT 58
+ ++ +E + + + + LGA L V G + E
Sbjct: 73 LDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEERRGD 132
Query: 59 LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAE 118
V+K+ +GV+G ITPWNFP + K+ A A G VV+KPSE TP A+ AE
Sbjct: 133 D-----LVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAE 187
Query: 119 LALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSL 178
+ + G+P GV N+V G+ +G+ L P+VR ++FTGS G K+M AA KKVSL
Sbjct: 188 IFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSL 247
Query: 179 ELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVK 238
ELGG +P IV DD D+ A N+GQ C RVLV I + F +
Sbjct: 248 ELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFS 307
Query: 239 NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT---FYEPT 295
++VG+ +G GP+I+K ++V+ ++ + +GA++ GG G+ F PT
Sbjct: 308 QVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPT 367
Query: 296 VLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE 355
+ NV ++M +++EE+FGPV ++ + +EAI +ANDT GLA Y+ + + +V+
Sbjct: 368 IFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVAR 427
Query: 356 ALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402
++E G V +NE + PFGG KQSGLGRE YG++EFLE+K +
Sbjct: 428 SIEAGTVEINEAGRKPD-LPFGGYKQSGLGREWGDYGIEEFLEVKSI 473
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 473 bits (1219), Expect = e-165
Identities = 140/407 (34%), Positives = 226/407 (55%), Gaps = 8/407 (1%)
Query: 1 MYRVWEERKQKMLYLRLLMRLILGASSLLLREVDY--GAKFIEFYAEEAKRVYGEIIPAT 58
+ ++ E +++ + + + +GA + G+ I + + K +
Sbjct: 91 VEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALIE 150
Query: 59 LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAE 118
+ + + +GV G ITPWN+P+ +T KV PAL GCT+V+KPSE PL+A+ AE
Sbjct: 151 -GNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAE 209
Query: 119 LALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSL 178
+ +A +P GV N++ G+ ++G L P + I+FTGST GK + A+ T+K+V L
Sbjct: 210 ILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCL 269
Query: 179 ELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVK 238
ELGG I+F DAD++ A+ + F NSGQ+C R+LV++ IY+K +
Sbjct: 270 ELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAE 328
Query: 239 NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT---FYEPT 295
+VG G G GP+++K +K++ ++ + +GA ++ GG +GM + PT
Sbjct: 329 KTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPT 388
Query: 296 VLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE 355
V ++VK M + REE+FGPV LL F TE+EA+ +ANDT GL YI + + + R++
Sbjct: 389 VFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAA 448
Query: 356 ALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402
+ G+V VN + + FGGVK SG REG +G+ EFL+ K +
Sbjct: 449 QVRSGMVEVNGHELPGG-SYFGGVKFSGRAREGGLWGIKEFLDTKAI 494
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 472 bits (1216), Expect = e-165
Identities = 132/375 (35%), Positives = 211/375 (56%), Gaps = 5/375 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
+ ++A A +V + + V ++PVGV GAI WN PL + K+
Sbjct: 109 HWMGSMGAMNYFAGAADKVTWTETRTGSYGQSI-VSREPVGVVGAIVAWNVPLFLAVNKI 167
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PAL GCT+V+KP+ TPLTA A AE+ + G+P GV++VV G + G AL ++P +
Sbjct: 168 APALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDID 226
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
TFTGS+AVG+++ AA +K +LELGG + I+ +D DL A+ + + N+GQ
Sbjct: 227 MFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQ 286
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
CV R+L Y++ A + V L VG GPLI++ +VE ++
Sbjct: 287 GCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKG 346
Query: 272 VSKGAKVLLGGRRHSLGMT--FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 329
+ +GA+++ GG R F +PTV ++V ++M +++EE+FGPV ++ + TEE+AI
Sbjct: 347 IEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIA 406
Query: 330 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGS 389
+AND+ GLA ++T ++ + ++S+ + G G+N +PFGG K SG+GRE
Sbjct: 407 IANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYAFDPG-SPFGGYKNSGIGRENG 465
Query: 390 KYGMDEFLEIKYVCL 404
G++ F + K V L
Sbjct: 466 PEGVEHFTQQKSVLL 480
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 455 bits (1174), Expect = e-158
Identities = 115/380 (30%), Positives = 187/380 (49%), Gaps = 10/380 (2%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
+ F+E+YA + + + P + P+GV I+PWNF LA++
Sbjct: 134 DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTA 193
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
+ G TVV+KP+ TP+ A E+ AG+P GV+N V G+ ++GD L+ P+
Sbjct: 194 VAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTS 253
Query: 152 KITFTGSTAVGKKLMAGAA------GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAK 205
ITFTGS VG +L AA +K+V +E+GG +V DADL++A L +
Sbjct: 254 LITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSA 313
Query: 206 FRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVE 265
F SGQ C +R ++ + +Y++ + KNL VGD GP+I++ A EK+
Sbjct: 314 FGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIM 373
Query: 266 TFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325
+++E +G +++ GG S F +PT+++++ E ++ +EE+FGPV +
Sbjct: 374 SYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFD 432
Query: 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSG 383
A+ +AN+T GL + T N + G + N V PFGG K SG
Sbjct: 433 HALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSG 492
Query: 384 LG-REGSKYGMDEFLEIKYV 402
+ G + ++ K V
Sbjct: 493 TDSKAGGPDYLALHMQAKTV 512
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 434 bits (1119), Expect = e-150
Identities = 118/382 (30%), Positives = 185/382 (48%), Gaps = 12/382 (3%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPAT-LPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 90
+V FIE+YA A R + P P+G I PWNFP+A+ T
Sbjct: 134 DVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGM 193
Query: 91 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQV 150
+ +A G TV+ KP+E + E+ +AG PPGVVN + G ++G L+ P++
Sbjct: 194 IVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRI 253
Query: 151 RKITFTGSTAVGKKLMAGAA------GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA 204
R I FTGS VG K+ A K+ +E GG IV + AD ++A G + +
Sbjct: 254 RFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVS 313
Query: 205 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 264
+ GQ C A+R+++ +G YE + K + L VG E GP+++ KV
Sbjct: 314 AYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGP-AEENPDLGPVVSAEQERKV 372
Query: 265 ETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324
+++E ++G +++LGG+R F PTV + V + +++EE+FGPV ++ K
Sbjct: 373 LSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDF 431
Query: 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQS 382
EA+ +ANDT GL +++ + G + N + V PFGG K S
Sbjct: 432 AEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLS 491
Query: 383 GLGRE-GSKYGMDEFLEIKYVC 403
G + G+ + FLE+K V
Sbjct: 492 GTNAKTGALDYLRLFLEMKAVA 513
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 426 bits (1097), Expect = e-146
Identities = 83/416 (19%), Positives = 147/416 (35%), Gaps = 47/416 (11%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRL---------FVLKQPVGVAGAITPWNF 82
++D G + +YA+ + L VL GVA I +NF
Sbjct: 104 DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNF 163
Query: 83 PLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI-PPGVVNVVMGNAPDIG 141
P + K PAL G V+VKP+ T + AGI PPG ++++ G++
Sbjct: 164 PSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSS---A 220
Query: 142 DALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK--KVSLELGGNAPCIVFDDAD-----L 194
L ++FTGS L A A + +++++ I+ DA
Sbjct: 221 GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAF 280
Query: 195 NVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP 254
++ + + SGQ C R V E E +A + + VG+ + V G
Sbjct: 281 DLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGS 340
Query: 255 LINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT-----FYEPTVL--SNVKSEMLVS 307
L+++ E V + + + P + ++ + L+
Sbjct: 341 LVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLH 400
Query: 308 REEVFGPVAPLLCFKT--------EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEY 359
EVFGPVA + ++ E A+ +A L A I++N+ R++ L
Sbjct: 401 DVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELAD 460
Query: 360 GLVGVN-----------EGLISTEVAPFGGVKQSGLGRE-GSKYGMDEFLEIKYVC 403
V+ ++ GG ++G G E G + + +
Sbjct: 461 SHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQ 516
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 375 bits (964), Expect = e-126
Identities = 95/397 (23%), Positives = 142/397 (35%), Gaps = 39/397 (9%)
Query: 32 EVDYGAKFIEFYAEEAK------RVYGEIIPATLPDRR--LFVLKQPVGVAGAITPWNFP 83
E + +A+ + R +P P R + ++++PVG NFP
Sbjct: 123 ERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFP 182
Query: 84 LAMIT--RKVGPALACGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNA 137
LA T ALA GC VVVK P T AE A G+ PGV +++ G +
Sbjct: 183 LAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGS 242
Query: 138 PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV--SLELGGNAPCIVFDDADLN 195
D+G AL+ P ++ + FTGS A G+ L A + + ELG P + +A
Sbjct: 243 RDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKA 302
Query: 196 VA---VNGALAAKFRNSGQTCVCANRVLVQEGI-YEKFADAFSKAVKNLKVGDGFGEGVV 251
A G + +GQ C +V EG ++F A +A+ + +G+
Sbjct: 303 RAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIA 362
Query: 252 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEV 311
+ +A A K LL + EEV
Sbjct: 363 KAYRDGQARF---------ATRNAVKPLLATESSGRDASPNLFETTGAQFLADHALGEEV 413
Query: 312 FGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT--NNLQRTWRVSEALEY--GLVGVNEG 367
FGP+ ++ + E +A L A I +L+ R+ LE G V VN
Sbjct: 414 FGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGF 473
Query: 368 LISTEV----APFGGVKQSGLGREGS--KYGMDEFLE 398
EV G S S + FL
Sbjct: 474 PTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLR 510
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 370 bits (951), Expect = e-119
Identities = 114/374 (30%), Positives = 173/374 (46%), Gaps = 10/374 (2%)
Query: 39 FIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACG 98
F+E+YA E R+ P +P GVA I PWNFPLA+ A+ G
Sbjct: 635 FLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTG 694
Query: 99 CTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGS 158
VV KPS T + EL +AG+P GV N G +GD L+ P + I FTGS
Sbjct: 695 NCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGS 754
Query: 159 TAVGKKLMAGAA------GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQT 212
G +++ AA VKK+ E+GG I+ DDADL+ AV L + F GQ
Sbjct: 755 METGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQK 814
Query: 213 CVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 272
C +RV+V + +Y+KF + K KVG G + + A++ ++ + E
Sbjct: 815 CSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGK 874
Query: 273 SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 332
+G + G F T++ +K E +++EE+FGPV ++ K ++AI AN
Sbjct: 875 REGHVLYESPVPAGEG-YFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWAN 933
Query: 333 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLG-REGS 389
T L IF+ + + + G + +N V PFGG + SG+G + G
Sbjct: 934 STQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGG 993
Query: 390 KYGMDEFLEIKYVC 403
+ F++ + V
Sbjct: 994 PDYLLHFMDPRVVT 1007
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 331 bits (850), Expect = e-110
Identities = 76/397 (19%), Positives = 129/397 (32%), Gaps = 37/397 (9%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGE--------IIPATLPDRRLFVLKQPVGVAGAITPWNFP 83
E+ A + +A+ A LP + + +G NFP
Sbjct: 90 EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFP 149
Query: 84 LAMITR--KVGPALACGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNA 137
LA ALA GC V+VK P T+ AE QA +P + ++ GN
Sbjct: 150 LAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQ 209
Query: 138 PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVS--LELGGNAPCIVFDDADLN 195
+G AL++ P+++ + FTGS G+ L A + + ELG P +F A
Sbjct: 210 RALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRA 269
Query: 196 VA--VNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 253
A + +A+ GQ C V AF + + + +
Sbjct: 270 KADLADQFVASMTMGCGQFCTKPGVVFALNTP---ETQAFIETAQ--SLIRQQSPSTLLT 324
Query: 254 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFG 313
P I + +V G V + S + EE+FG
Sbjct: 325 PGIRDSYQSQVV---SRGSDDGIDVTFSQAESP-CVASALFVTSSENWRKHPAWEEEIFG 380
Query: 314 PVAPLLCFKTEEEAIHMANDTNAGLAAYIFT--NNLQRTWRVSEALEY--GLVGVNE--- 366
P + ++ + + + ++ L A I + + ++ LE G + N
Sbjct: 381 PQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPT 440
Query: 367 GLISTEVAPFGGVKQS---GLGREGSKYGMDEFLEIK 400
G+ GG + + +L
Sbjct: 441 GVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPV 477
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 290 bits (743), Expect = 2e-94
Identities = 61/356 (17%), Positives = 119/356 (33%), Gaps = 41/356 (11%)
Query: 40 IEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGC 99
+ K + + ++++ + P+GV + P P + + K ++ G
Sbjct: 78 SKHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGN 137
Query: 100 TVVVKPSEFTPLTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITF 155
++V P L + A +AG P G ++ + D L+ I
Sbjct: 138 SIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILA 197
Query: 156 TGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVC 215
TG +A+ K A + GN P + A++ AV L +K ++G C
Sbjct: 198 TGGSAMVKA----AYSSGTPAIGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICAS 253
Query: 216 ANRVLVQEGIYEKFADAFSKAVKNL-------KVGDG-FGEGVVQGPLINKAALEKVETF 267
V+V+ E F K + ++G P I +++ +
Sbjct: 254 EQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANL 313
Query: 268 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
V A+VL+ + V +++ SRE+ P+ +T +EA
Sbjct: 314 AGLTVPADARVLIAE--------------ETKVGAKIPYSREK-LAPILAFYTAETWQEA 358
Query: 328 IHMANDTNA----GLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGV 379
++ D G I + + + + + VN GG+
Sbjct: 359 CELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTP------GALGGI 408
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 300 bits (769), Expect = 4e-93
Identities = 104/382 (27%), Positives = 172/382 (45%), Gaps = 15/382 (3%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLK-QPVGVAGAITPWNFPLAMITRK 90
E+ A F +YA + ++++G P L + GV AI+PWNFPLA+ +
Sbjct: 610 ELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQ 669
Query: 91 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQV 150
V AL G +VV KP+E TP A A L +AGIP + +V G+ IG AL P +
Sbjct: 670 VTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDG-RIGAALTAHPDI 728
Query: 151 RKITFTGSTAVGKKL---MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 207
+ FTGST V + + +A G + + E GG I A + + + FR
Sbjct: 729 AGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFR 788
Query: 208 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 267
++GQ C + VQE + ++ + + A + LK+GD GP+I+ A ++++
Sbjct: 789 SAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAH 848
Query: 268 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE--E 325
+ ++ G F P + ++ L EEVFGP+ ++ ++ E E
Sbjct: 849 IARMKTEARLHFAGPAPEG---CFVAPHIFELTEAGQL--TEEVFGPILHVVRYRPENLE 903
Query: 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSG 383
+ T GL + + + + ++ G + VN +I V PFGG SG
Sbjct: 904 RVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSG 963
Query: 384 LG-REGSKYGMDEFLEIKYVCL 404
G + G + + F + V +
Sbjct: 964 TGPKAGGPHYLARFATEQTVTI 985
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 271 bits (694), Expect = 4e-87
Identities = 63/349 (18%), Positives = 129/349 (36%), Gaps = 30/349 (8%)
Query: 42 FYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTV 101
+ + ++ G + + + +PVG+ I P P + K +L +
Sbjct: 77 YNKYKDEQTCGIL--EEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGI 134
Query: 102 VVKPSEFTPLTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTG 157
+ P + AA+L A+ AG P ++ + + ++ +AL+ + I TG
Sbjct: 135 IFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATG 194
Query: 158 STAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCAN 217
+ K A + K GN P ++ + AD+ AV L +K ++G C
Sbjct: 195 GPGMVKA----AYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQ 250
Query: 218 RVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAK 277
V+V + +Y++ + F+ ++ + V + LI+ A K+ A+++ A
Sbjct: 251 AVIVVDEVYDEVKERFASHKAHVLSKTDA-DKVRKVLLIDGALNAKIVGQPATAIAEMAG 309
Query: 278 VLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA----ND 333
V + L V + + E+ P + E+A+ A
Sbjct: 310 VKVPADTK-----VLIGEGLGKVSYDDAFAHEK-LSPTLGMFRADNFEDAVAQAVTMVEI 363
Query: 334 TNAGLAAYIFTN---NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGV 379
G + ++TN N R + ++ + +N GG+
Sbjct: 364 GGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIP------TTHGGI 406
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 266 bits (682), Expect = 6e-85
Identities = 111/347 (31%), Positives = 186/347 (53%), Gaps = 8/347 (2%)
Query: 52 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR-KVGPALACGCTVVVKPSEFTP 110
G+ + + D + P+GV G I P+NFP M+ A+A G T ++KPSE TP
Sbjct: 123 GDSLASIATDVEAANYRYPIGVVGGIAPFNFP-MMVPCWMFPMAIALGNTFILKPSERTP 181
Query: 111 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 170
L EL +AG+P GV NVV G A D+ + +L P+++ I+F GS VG+ + +
Sbjct: 182 LLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGS 240
Query: 171 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 230
+K+V G IV +DA+L V + A F ++G+ C+ V V+EGI ++F
Sbjct: 241 ENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFM 300
Query: 231 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 290
+ V ++K+G+G +GV GP+I + ++ +++E + +GA+++ GR +
Sbjct: 301 AKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDG 360
Query: 291 FYE-PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 349
++ PT+ NV +EM + ++E+F PV ++ K +EAI +AN + A +FT+N
Sbjct: 361 YFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNA 420
Query: 350 TWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLGREGSKYGMD 394
E ++ G++G+N G + +A PF G K S G G D
Sbjct: 421 IRYFRENIDAGMLGINLG-VPAPMAFFPFSGWKSSFFG-TLHANGKD 465
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 264 bits (678), Expect = 1e-84
Identities = 124/421 (29%), Positives = 186/421 (44%), Gaps = 50/421 (11%)
Query: 5 WEERKQKMLYLRLLMRLILGASSLLLR--EVDYGAKFIEFYAEEAKRVYGEII------- 55
+ R Q+ L L RLI L+ D Y EE V EI
Sbjct: 39 LQFRIQQ---LEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKLP 95
Query: 56 -----------PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP---ALACGCTV 101
P T D L++ +P+GV I WN+P + + P A+A G V
Sbjct: 96 EWAADEPVEKTPQTQQDE-LYIHSEPLGVVLVIGTWNYPFNLT---IQPMVGAIAAGNAV 151
Query: 102 VVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 161
V+KPSE + A A + + + + V+ G LL I +TGST V
Sbjct: 152 VLKPSELSENMASLLATI-IPQYLDKDLYPVING-GVPETTELLKERFD-HILYTGSTGV 208
Query: 162 GKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLV 221
GK +M AA + V+LELGG +PC V + DL+VA KF NSGQTCV + +L
Sbjct: 209 GKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILC 268
Query: 222 QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP----LINKAALEKVETFVEDAVSKGAK 277
I + + K++K +GE + +I+ ++V +E K
Sbjct: 269 DPSIQNQIVEKLKKSLKEF-----YGEDAKKSRDYGRIISARHFQRVMGLIEG-----QK 318
Query: 278 VLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG 337
V GG + + PT+L++V + V +EE+FGPV P++C ++ EEAI N
Sbjct: 319 VAYGGTGDAATR-YIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKP 377
Query: 338 LAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDE 395
LA Y+F++N + ++ G V N+ ++ + PFGGV SG+G K +
Sbjct: 378 LALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFET 437
Query: 396 F 396
F
Sbjct: 438 F 438
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 261 bits (670), Expect = 1e-82
Identities = 106/352 (30%), Positives = 177/352 (50%), Gaps = 14/352 (3%)
Query: 52 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR-KVGPALACGCTVVVKPSEFTP 110
E P ++ ++QPVG+ ITP+NFP MI PA+ACG ++KPSE P
Sbjct: 144 SEFTEGAGPGIDMYSIRQPVGIGAGITPFNFP-GMIPMWMFAPAIACGNAFILKPSERDP 202
Query: 111 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 170
+ AEL ++AG+P G++NVV G DA+LT P + ++F GST + + + AA
Sbjct: 203 SVPIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAA 261
Query: 171 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCV-CANRVLVQEGIYEKF 229
K+ G I+ DADL+ A N + A + ++G+ C+ + V V E +
Sbjct: 262 MNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRL 321
Query: 230 ADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-- 287
D V++L++G E GP++ K A +++ + ++ + +GAK+++ GR L
Sbjct: 322 IDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQG 381
Query: 288 ---GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 344
G F + +V +M + + E+FGPV ++ + EEA+ + G I+T
Sbjct: 382 YENG-HFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYT 440
Query: 345 NNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLGREGSKYGMD 394
+ + + G+VGVN I +A FGG K S G + +++G D
Sbjct: 441 RDGDAARDFASRINIGMVGVNVP-IPVPLAYHSFGGWKSSSFG-DLNQHGTD 490
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 241 bits (618), Expect = 1e-75
Identities = 112/421 (26%), Positives = 173/421 (41%), Gaps = 45/421 (10%)
Query: 2 YRVWEERKQKMLYLRLLMRLILGASSLLLR--EVDYGAKFIEFYAEEAKRVYGEII---- 55
RKQ L L ++ L D G E V EI
Sbjct: 46 TADVGFRKQS---LERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALA 102
Query: 56 --------------PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP---ALACG 98
P +V+++P GV I P+N+P+ + + P A+ G
Sbjct: 103 HLDEWVAPVSVPSPDIIAPSE-CYVVQEPYGVTYIIGPFNYPVNLT---LTPLIGAIIGG 158
Query: 99 CTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGS 158
T ++KPSE TP T+ ++ + P V V+ G D LL+ P I FTGS
Sbjct: 159 NTCIIKPSETTPETSAVIEKI-IAEAFAPEYVAVIQG-GRDENSHLLSLP-FDFIFFTGS 215
Query: 159 TAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANR 218
VGK +M AA + V LELGG P IV DADL+ VN + KF NSGQT + +
Sbjct: 216 PNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDY 275
Query: 219 VLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKV 278
+ V + + + + VK E G L+ + ++++ + +E +V
Sbjct: 276 LYVHYSVKDALLERLVERVKTE-----LPEINSTGKLVTERQVQRLVSLLEAT---QGQV 327
Query: 279 LLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG- 337
L+G + TV+ V+ + EE+FGP+ P+L F + AI N +
Sbjct: 328 LVGSQADVSKR-ALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKP 386
Query: 338 LAAYIFTNNLQRTWRVSEALEYGLVGVNEGL--ISTEVAPFGGVKQSGLGREGSKYGMDE 395
LA Y+F ++ + ++ G VN + + PFGG+ SG+G +
Sbjct: 387 LAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLT 446
Query: 396 F 396
F
Sbjct: 447 F 447
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 225 bits (576), Expect = 2e-68
Identities = 92/363 (25%), Positives = 159/363 (43%), Gaps = 18/363 (4%)
Query: 39 FIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACG 98
F F A+ A + GE + P V + G AI+P+NF A+ G G
Sbjct: 169 FFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFT-AIGGNLAGAPALMG 227
Query: 99 CTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGS 158
V+ KPS+ L + A + +AG+PP ++ V + P GD + +S + I FTGS
Sbjct: 228 NVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGS 287
Query: 159 TAVGKKLMAGAA------GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQT 212
K L A T +++ E GG V AD++ V+G L + F GQ
Sbjct: 288 VPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQK 347
Query: 213 CVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE-GVVQGPLINKAALEKVETFVEDA 271
C +R+ V + ++ + + +KVGD + G +I+ A +++ ++E A
Sbjct: 348 CSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHA 407
Query: 272 VSKG-AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EEAI 328
S +L GG+ + + EP ++ + + + +EE+FGPV + + + E +
Sbjct: 408 RSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETL 467
Query: 329 HMANDTNA-GLAAYIFTNNLQRTWRVSEALEYGLVG---VNEGLISTEVA--PFGGVKQS 382
+ + T + GL +F + + L G +N+ + V PFGG + S
Sbjct: 468 KLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNA-AGNFYINDKSTGSVVGQQPFGGARAS 526
Query: 383 GLG 385
G
Sbjct: 527 GTN 529
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 410 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 97.84 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 97.62 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-93 Score=719.28 Aligned_cols=397 Identities=36% Similarity=0.583 Sum_probs=376.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLR-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
+++++++++++++|+|||+.+++. |+..+++.++||+.+.+++.++..+. .++...+++++|+|||++|+|||||+..
T Consensus 80 ~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwNfP~~~ 158 (490)
T 2wme_A 80 RERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQI 158 (490)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEE-ETTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccc-cCCcceeEEecceeEEEEeccccCcchh
Confidence 345567799999999999999986 69999999999999998877765543 2466788999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.+.
T Consensus 159 ~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~ 238 (490)
T 2wme_A 159 ALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238 (490)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred hhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999998887
Q ss_pred H-HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 167 A-GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 167 ~-~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
+ .+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 239 ~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp 318 (490)
T 2wme_A 239 ASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDP 318 (490)
T ss_dssp HHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCC
Confidence 6 455678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceecceEeccCCCCCcccccceecceeeeeec
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 321 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~ 321 (410)
.++++++||++++.+++++.++|++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 319 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 398 (490)
T 2wme_A 319 QDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVY 398 (490)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred ccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEe
Confidence 99999999999999999999999999999999999998653 24899999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 015249 322 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 401 (410)
Q Consensus 322 ~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~ 401 (410)
+|.||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|.+||++||+.|+
T Consensus 399 ~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~ 478 (490)
T 2wme_A 399 DDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKS 478 (490)
T ss_dssp SCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEE
T ss_pred CCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHHHhhceeE
Confidence 99999999999999999999999999999999999999999999987777889999999999999999999999999999
Q ss_pred EEEe
Q 015249 402 VCLG 405 (410)
Q Consensus 402 v~~~ 405 (410)
|+++
T Consensus 479 v~i~ 482 (490)
T 2wme_A 479 VQVE 482 (490)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9986
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-91 Score=709.06 Aligned_cols=398 Identities=57% Similarity=0.964 Sum_probs=379.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
+++++++++++++|+|||+.+++.|+..+++.++|++.++++..++..+...++...++.++|+|||++|+|||||+...
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 165 (484)
T 3ifg_A 86 IANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMI 165 (484)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHH
Confidence 34566779999999999999999999999999999999988766655443335677899999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|++
T Consensus 166 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~ 245 (484)
T 3ifg_A 166 ARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMA 245 (484)
T ss_dssp HHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977889999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.+++++||+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 246 ~aa~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 325 (484)
T 3ifg_A 246 QSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTE 325 (484)
T ss_dssp HTGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HhhccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ea 327 (410)
+++++||++++.+++++.++|++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|.|||
T Consensus 326 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 405 (484)
T 3ifg_A 326 SGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEEL 405 (484)
T ss_dssp TTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHH
Confidence 99999999999999999999999999999999999764336899999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 328 i~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
|+++|+++|||+++|||+|.++++++++++++|+|+||+.....+.+||||+|+||+|+++|.+|+++||+.|+|++.
T Consensus 406 i~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 406 VRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp HHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 999999999999999999999999999999999999999877788999999999999999999999999999999874
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-90 Score=707.19 Aligned_cols=399 Identities=38% Similarity=0.653 Sum_probs=379.8
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++++|+|||+.+++.|+..+++.++|++.+++++.++..+...++...++.++|+|||++|+|||||+...
T Consensus 108 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 187 (520)
T 3ed6_A 108 KEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQA 187 (520)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHH
Confidence 34567779999999999999999999999999999999998876655443324667889999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|++
T Consensus 188 ~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~ 267 (520)
T 3ed6_A 188 SWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMK 267 (520)
T ss_dssp HHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977889999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.|
T Consensus 268 ~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d 347 (520)
T 3ed6_A 268 NAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFD 347 (520)
T ss_dssp HHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTS
T ss_pred HhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+++++||++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 348 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 427 (520)
T 3ed6_A 348 ADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFET 427 (520)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCC
Confidence 999999999999999999999999999999999997642 3589999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
+||||+++|+++|||+++|||+|.++++++++++++|+|+||+.....+.+||||+|+||+|+++|.+|+++||+.|+|+
T Consensus 428 ~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~ 507 (520)
T 3ed6_A 428 EQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHIL 507 (520)
T ss_dssp HHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999999998877789999999999999999999999999999998
Q ss_pred Eec
Q 015249 404 LGD 406 (410)
Q Consensus 404 ~~~ 406 (410)
++.
T Consensus 508 ~~~ 510 (520)
T 3ed6_A 508 TNT 510 (520)
T ss_dssp EES
T ss_pred EcC
Confidence 863
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-90 Score=706.70 Aligned_cols=396 Identities=59% Similarity=0.955 Sum_probs=378.3
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++++|+|||+.+++.|+..+++.++|++.+.++..+...+...++...++.++|+|||++|+|||||+...
T Consensus 106 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 185 (504)
T 3ek1_A 106 IANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMI 185 (504)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHH
Confidence 34556779999999999999999999999999999999998766655444345677889999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|.+
T Consensus 186 ~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~ 265 (504)
T 3ek1_A 186 TRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMA 265 (504)
T ss_dssp HHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877889999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.+++++||+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 266 ~aa~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 345 (504)
T 3ek1_A 266 QCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTE 345 (504)
T ss_dssp HHGGGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTS
T ss_pred hhhhhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ea 327 (410)
+++++||++++.+++++.++|++++++|+++++||... +|+|++|||+.+++++|++++||+||||++|++|+|.|||
T Consensus 346 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 423 (504)
T 3ek1_A 346 PGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKEL--GGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEV 423 (504)
T ss_dssp TTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEE--ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHH
T ss_pred ccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHH
Confidence 99999999999999999999999999999999999763 5799999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 328 i~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
|+++|+++|||+++|||+|.++++++++++++|+|+||+.....+.+||||+|+||+|+++|++|+++|++.|+|+++
T Consensus 424 i~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~ 501 (504)
T 3ek1_A 424 IAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSA 501 (504)
T ss_dssp HHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEE
T ss_pred HHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEe
Confidence 999999999999999999999999999999999999999887788999999999999999999999999999999875
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-90 Score=700.65 Aligned_cols=397 Identities=28% Similarity=0.468 Sum_probs=378.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++.+|+||++.+++.|+..+++.++|++...+++.+...+.. .+...++.++|+|||++|+|||||+...
T Consensus 62 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 140 (484)
T 3ros_A 62 KEHEDELAKMMTLEMGKLLSESKEEVELCVSICNYYADHGPEMLKPTKLNS-DLGNAYYLKQSTGVIMACEPWNFPLYQV 140 (484)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECC-TTSEEEEEEECCCEEEEECCSSSTTHHH
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeccC-CCceeEEEecCCceEEEECCCchHHHHH
Confidence 445667799999999999999999999999999999999988777654432 4567899999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|++.+.+. |+.||+||.|+||||+.+|+.|++
T Consensus 141 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~ 219 (484)
T 3ros_A 141 IRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAE 219 (484)
T ss_dssp HHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999997777788 999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 220 ~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 299 (484)
T 3ros_A 220 AAGKNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLE 299 (484)
T ss_dssp HHHHTTCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HHhccCCceEeecCCCCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ea 327 (410)
+++++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 300 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 379 (484)
T 3ros_A 300 ADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAA 379 (484)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHH
T ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHH
Confidence 99999999999999999999999999999999999764346899999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 015249 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 406 (410)
Q Consensus 328 i~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 406 (410)
|+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|++|+++|++.|+|+++.
T Consensus 380 i~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 458 (484)
T 3ros_A 380 IQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVT 458 (484)
T ss_dssp HHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECG
T ss_pred HHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECC
Confidence 9999999999999999999999999999999999999998777899999999999999999999999999999999864
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-90 Score=702.94 Aligned_cols=398 Identities=44% Similarity=0.732 Sum_probs=379.2
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEe-eeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLK-QPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~p~n~p~~~ 86 (410)
++++.++++++++|+||++.+++.|+..+++.++|++...+++.++..+.. .+...++.+ +|+|||++|+|||||+..
T Consensus 85 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 163 (506)
T 3rh9_A 85 KENREEIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPEK-PKDCTWTVHYRPVGVTGLIVPWNFPIGM 163 (506)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECSCC-GGGCEEEEEEEECCSEEEECCSSSTTHH
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeeEeecccceEEEEECCCchHHHH
Confidence 445677799999999999999999999999999999999988877654432 456678888 999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.+..|+.||+||.|+||||+.+|+.|+
T Consensus 164 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~ 243 (506)
T 3rh9_A 164 IAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLI 243 (506)
T ss_dssp HHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998788999999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus 244 ~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 323 (506)
T 3rh9_A 244 VDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGM 323 (506)
T ss_dssp HHTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTT
T ss_pred HHhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC-CCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~-~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
++++++||++++.+++++.++|++++++|+++++||...+. +|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 324 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 403 (506)
T 3rh9_A 324 NDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEE 403 (506)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred ccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHH
Confidence 99999999999999999999999999999999999976333 68999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
|||+++|+++|||+++|||+|.++++++++++++|+|+||+++...+.+||||+|+||+|+++|++|+++||+.|+|+++
T Consensus 404 eAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~ 483 (506)
T 3rh9_A 404 EVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRG 483 (506)
T ss_dssp HHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEc
Confidence 99999999999999999999999999999999999999999988788999999999999999999999999999999886
Q ss_pred c
Q 015249 406 D 406 (410)
Q Consensus 406 ~ 406 (410)
.
T Consensus 484 ~ 484 (506)
T 3rh9_A 484 F 484 (506)
T ss_dssp -
T ss_pred C
Confidence 4
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-89 Score=703.14 Aligned_cols=399 Identities=39% Similarity=0.616 Sum_probs=379.9
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++.+|+||++.+++.|+..+++.++|++...+++.++..+....+...++.++|+|||++|+|||||+...
T Consensus 99 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 178 (528)
T 3u4j_A 99 LARQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIA 178 (528)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHH
Confidence 34566779999999999999999999999999999999998876655443324667889999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.+..|+.||+||.|+||||+.+|+.|++
T Consensus 179 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 258 (528)
T 3u4j_A 179 SERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGE 258 (528)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977889999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 259 ~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 338 (528)
T 3u4j_A 259 IAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLN 338 (528)
T ss_dssp HHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTS
T ss_pred HHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC-CCceecceEeccCCCCCcccccceecceeeeeecCCHHH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~-~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 326 (410)
+++++||++++.+++++.++|++++++|+++++||..... +|+|++|||+.+++++|++++||+||||++|++|+|.||
T Consensus 339 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 418 (528)
T 3u4j_A 339 ERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADE 418 (528)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred cCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHH
Confidence 9999999999999999999999999999999999976532 689999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 015249 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 406 (410)
Q Consensus 327 ai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 406 (410)
||+++|+++|||+++|||+|.++++++++++++|+|+||+.+...+.+||||+|+||+|+++|++|+++|++.|+|+++.
T Consensus 419 Ai~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 498 (528)
T 3u4j_A 419 AVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTL 498 (528)
T ss_dssp HHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEES
T ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeC
Confidence 99999999999999999999999999999999999999998877889999999999999999999999999999998863
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-90 Score=702.95 Aligned_cols=398 Identities=37% Similarity=0.620 Sum_probs=376.0
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCC---CCCcceeEEeeeceEEEEEcCCCcc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPAT---LPDRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
++++.++++++++|+|||+.+++ .|+..+++.++|++.+++++.++..+.. .++...++.++|+|||++|+|||||
T Consensus 112 ~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P 191 (517)
T 2o2p_A 112 EQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYP 191 (517)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSH
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcch
Confidence 44567779999999999999998 8999999999999999988766543321 2233578999999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|.+.+.+..|+.||+|+.|+||||+.+|+
T Consensus 192 ~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~ 271 (517)
T 2o2p_A 192 LMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGK 271 (517)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999999999999999999997778899999999999999999999999
Q ss_pred HHHHHhc-cccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhccc
Q 015249 164 KLMAGAA-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 242 (410)
Q Consensus 164 ~i~~~~~-~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~ 242 (410)
.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 272 ~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~v 351 (517)
T 2o2p_A 272 HIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKI 351 (517)
T ss_dssp HHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred HHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCC
Confidence 9999998 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 243 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 243 g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
|+|.++++++||++++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 352 Gdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 431 (517)
T 2o2p_A 352 GNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFA 431 (517)
T ss_dssp SCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEEC
T ss_pred CCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcC
Confidence 99999999999999999999999999999999999999997643358999999999999999999999999999999999
Q ss_pred C--HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheee
Q 015249 323 T--EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400 (410)
Q Consensus 323 ~--~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k 400 (410)
| +||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|.+++++|++.|
T Consensus 432 ~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k 511 (517)
T 2o2p_A 432 DGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIK 511 (517)
T ss_dssp TTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHHHHTTEEEE
T ss_pred CCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHHHHHhCCce
Confidence 9 99999999999999999999999999999999999999999998777789999999999999999999999999999
Q ss_pred EEEEe
Q 015249 401 YVCLG 405 (410)
Q Consensus 401 ~v~~~ 405 (410)
+|+++
T Consensus 512 ~v~~~ 516 (517)
T 2o2p_A 512 TVTFE 516 (517)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 99874
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-89 Score=699.05 Aligned_cols=398 Identities=41% Similarity=0.665 Sum_probs=377.9
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccc-c--CCCCCcceeEEeeeceEEEEEcCCCcch
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEII-P--ATLPDRRLFVLKQPVGVAGAITPWNFPL 84 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~P~Gvv~~i~p~n~p~ 84 (410)
++++.++++++++|+|||+.+++.|+..+++.++|++.+.+++.+... + ....+...++.++|+|||++|+|||||+
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~ 165 (503)
T 3iwj_A 86 TEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPM 165 (503)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHH
Confidence 445667799999999999999999999999999999999988766432 1 1124567889999999999999999999
Q ss_pred hhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHH
Q 015249 85 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 164 (410)
Q Consensus 85 ~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~ 164 (410)
...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.
T Consensus 166 ~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~ 245 (503)
T 3iwj_A 166 LMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSK 245 (503)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987889999999999999999999999999
Q ss_pred HHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCC
Q 015249 165 LMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244 (410)
Q Consensus 165 i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~ 244 (410)
|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+
T Consensus 246 i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 325 (503)
T 3iwj_A 246 IMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISD 325 (503)
T ss_dssp HHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred HHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 245 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 245 ~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~--~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
|.++++++||++++.+++++.+++++++++|+++++||...+ .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 326 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 405 (503)
T 3iwj_A 326 PLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFS 405 (503)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeC
Confidence 999999999999999999999999999999999999997653 468999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
|.||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|++.|+|
T Consensus 406 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v 485 (503)
T 3iwj_A 406 TEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQV 485 (503)
T ss_dssp SHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHHHHhhCeEEE
Confidence 99999999999999999999999999999999999999999999877788999999999999999999999999999999
Q ss_pred EEe
Q 015249 403 CLG 405 (410)
Q Consensus 403 ~~~ 405 (410)
+++
T Consensus 486 ~~~ 488 (503)
T 3iwj_A 486 TQY 488 (503)
T ss_dssp EEE
T ss_pred EEe
Confidence 886
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-89 Score=695.41 Aligned_cols=398 Identities=57% Similarity=0.985 Sum_probs=379.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++++|+||++.+++.|+..+++.++|++....+..++..+...++...++.++|+|||++|+|||||++..
T Consensus 83 ~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 162 (481)
T 3jz4_A 83 MEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMI 162 (481)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHH
Confidence 34556779999999999999999999999999999999987766654443345677889999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|++
T Consensus 163 ~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~ 242 (481)
T 3jz4_A 163 TRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLME 242 (481)
T ss_dssp HHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987889999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 243 ~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 322 (481)
T 3jz4_A 243 QCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLD 322 (481)
T ss_dssp HHTTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTS
T ss_pred HHhhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ea 327 (410)
+++++||++++.+++++.+++++++++|+++++||...+.+++|++|||+.+++++|++++||+||||++|++|+|.|||
T Consensus 323 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 402 (481)
T 3jz4_A 323 NGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADV 402 (481)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHH
T ss_pred CcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHH
Confidence 99999999999999999999999999999999999764345799999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 328 i~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
|+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|++|+++|++.|+|+++
T Consensus 403 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 403 IAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp HHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 999999999999999999999999999999999999999887788999999999999999999999999999999875
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-90 Score=700.56 Aligned_cols=397 Identities=35% Similarity=0.601 Sum_probs=377.9
Q ss_pred HHHHHHHHHHHHHHhhchHHHH-HHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLL-LREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a-~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
+++++++++++.+|+|||+.++ +.|+..+++.++|++...+++.++..+...++...++.++|+|||++|+|||||+..
T Consensus 98 ~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 177 (498)
T 4f3x_A 98 EKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMM 177 (498)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHH
Confidence 3456677999999999999999 889999999999999998876665443323467788999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|.
T Consensus 178 ~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~ 256 (498)
T 4f3x_A 178 MAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVL 256 (498)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 9999999999999999999999999999999999999 999999999998888999999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus 257 ~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~ 336 (498)
T 4f3x_A 257 AAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDD 336 (498)
T ss_dssp HHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSS
T ss_pred HHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCC-eEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGA-KVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga-~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
|+++++||++++.+++++.++|++++++|+ ++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|.|
T Consensus 337 d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 416 (498)
T 4f3x_A 337 DTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKD 416 (498)
T ss_dssp GGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTS
T ss_pred cccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHH
Confidence 999999999999999999999999999999 9999997643468999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
|||+++|+++|||+++|||+|.++++++++++++|+|+||+++...+.+||||+|+||+|+++|.+++++||+.|+|+++
T Consensus 417 eAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~ 496 (498)
T 4f3x_A 417 DAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMIN 496 (498)
T ss_dssp CHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEE
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999999887778999999999999999999999999999999875
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-89 Score=698.67 Aligned_cols=399 Identities=38% Similarity=0.650 Sum_probs=377.0
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
+++++++++++.+|+||++.+++.|+..+++.++|++...+++.++..+....+...++.++|+|||++|+|||||+...
T Consensus 86 ~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 165 (497)
T 3k2w_A 86 RENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALA 165 (497)
T ss_dssp HTTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHH
Confidence 34556779999999999999999999999999999999988776654443335677889999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..|++++.++|+|+|++|+++|++.+.+..|+.||+||.|+||||+.+|+.|++
T Consensus 166 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~ 245 (497)
T 3k2w_A 166 GRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYK 245 (497)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977889999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 246 ~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~ 325 (497)
T 3k2w_A 246 TSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMD 325 (497)
T ss_dssp HHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcc--cC--CCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR--HS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~--~~--~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+++++||++++.+++++.+++++++++|+++++||.. .+ .+|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 326 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 405 (497)
T 3k2w_A 326 ADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSS 405 (497)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESC
T ss_pred CCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCC
Confidence 9999999999999999999999999999999999973 22 2589999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
+||||+++|+++|||+++|||+|.++++++++++++|+|+||+++...+.+||||+|+||+|+++|++|+++|++.|+|+
T Consensus 406 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~ 485 (497)
T 3k2w_A 406 MEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVY 485 (497)
T ss_dssp HHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHHHHhcceEEEE
Confidence 99999999999999999999999999999999999999999998887889999999999999999999999999999998
Q ss_pred Eec
Q 015249 404 LGD 406 (410)
Q Consensus 404 ~~~ 406 (410)
++.
T Consensus 486 ~~~ 488 (497)
T 3k2w_A 486 INE 488 (497)
T ss_dssp EEC
T ss_pred EEc
Confidence 863
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-88 Score=692.59 Aligned_cols=397 Identities=41% Similarity=0.648 Sum_probs=375.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
+++++++++++.+|+||++.++. .|+..+++.++|++...+++.++..+. ..+...++.++|+|||++|+|||||+..
T Consensus 97 ~~~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 175 (501)
T 1bxs_A 97 ERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM-DGNFFTYTRSEPVGVCGQIIPWNFPLLM 175 (501)
T ss_dssp HHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec-cCCcceeEEecCCceEEEECCCcchHHH
Confidence 44567779999999999999875 699999999999999988876654332 2455678999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|+
T Consensus 176 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~ 255 (501)
T 1bxs_A 176 FLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK 255 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997788899999999999999999999999999
Q ss_pred HHhc-cccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 167 AGAA-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 167 ~~~~-~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 256 ~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 335 (501)
T 1bxs_A 256 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNP 335 (501)
T ss_dssp HHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCT
T ss_pred HHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCC
Confidence 9999 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
.|+++++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 336 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 415 (501)
T 1bxs_A 336 LTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLD 415 (501)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred cccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHH
Confidence 99999999999999999999999999999999999997642357999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 416 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~ 495 (501)
T 1bxs_A 416 DVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK 495 (501)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEc
Confidence 99999999999999999999999999999999999999999877778999999999999999999999999999999886
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-88 Score=694.17 Aligned_cols=397 Identities=37% Similarity=0.602 Sum_probs=375.9
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++.+|+||++.+++.|+..+++.++|++.+.+++.++..+...++...++.++|+|||++|+|||||+...
T Consensus 100 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 179 (515)
T 2d4e_A 100 EKHADELAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLS 179 (515)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhh
Confidence 34566779999999999999999999999999999999988876654443234556789999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|++
T Consensus 180 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~ 259 (515)
T 2d4e_A 180 TWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMR 259 (515)
T ss_dssp HHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred hhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977788999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 260 ~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~ 339 (515)
T 2d4e_A 260 NAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLD 339 (515)
T ss_dssp HHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTS
T ss_pred HHhhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--------CCCceecceEeccCCCCCcccccceecceeeee
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--------LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLL 319 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~--------~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~ 319 (410)
+++++||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+ +++|++++||+||||++|+
T Consensus 340 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~ 418 (515)
T 2d4e_A 340 PETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAI 418 (515)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEE
T ss_pred ccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEE
Confidence 999999999999999999999999999999999997642 1589999999999 9999999999999999999
Q ss_pred ecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhhee
Q 015249 320 CFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEI 399 (410)
Q Consensus 320 ~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~ 399 (410)
+|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|.+|+++|++.
T Consensus 419 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~ 498 (515)
T 2d4e_A 419 PFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDL 498 (515)
T ss_dssp EESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHHHHHEEE
T ss_pred eeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhCce
Confidence 99999999999999999999999999999999999999999999999877778999999999999999999999999999
Q ss_pred eEEEEe
Q 015249 400 KYVCLG 405 (410)
Q Consensus 400 k~v~~~ 405 (410)
|+|+++
T Consensus 499 K~v~~~ 504 (515)
T 2d4e_A 499 KTIALP 504 (515)
T ss_dssp EEEEEE
T ss_pred eEEEEc
Confidence 999886
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-89 Score=694.89 Aligned_cols=396 Identities=40% Similarity=0.608 Sum_probs=375.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++.+|+|||+.+++.|+..+++.++|++.+.+++.++..+.. ++...++.++|+|||++|+|||||+...
T Consensus 94 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 172 (503)
T 1a4s_A 94 RERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIA 172 (503)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceeEEEEecCceEEEECCCcchHHHH
Confidence 345667799999999999999999999999999999999988766543322 3446789999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++ +.+..|+.||+|+.|+||||+.+|+.|++
T Consensus 173 ~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~ 251 (503)
T 1a4s_A 173 AWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVME 251 (503)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977 88999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 252 ~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 331 (503)
T 1a4s_A 252 MSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLL 331 (503)
T ss_dssp HHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc--C----CCCceecceEeccCCCCCcccccceecceeeeeec
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH--S----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 321 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~--~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~ 321 (410)
+++++||++++.+++++.+++++++++|+++++||... + ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 332 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 411 (503)
T 1a4s_A 332 TETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPF 411 (503)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred cCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEec
Confidence 99999999999999999999999999999999999754 1 24899999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 015249 322 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 401 (410)
Q Consensus 322 ~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~ 401 (410)
+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|.+|+++|++.|+
T Consensus 412 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~ 491 (503)
T 1a4s_A 412 DTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKT 491 (503)
T ss_dssp CCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEE
T ss_pred CCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcCceE
Confidence 99999999999999999999999999999999999999999999987777889999999999999999999999999999
Q ss_pred EEEe
Q 015249 402 VCLG 405 (410)
Q Consensus 402 v~~~ 405 (410)
|+++
T Consensus 492 v~~~ 495 (503)
T 1a4s_A 492 VIVE 495 (503)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9885
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-89 Score=693.07 Aligned_cols=398 Identities=39% Similarity=0.594 Sum_probs=375.8
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
++++.++++++.+|+||++.++. .|+..+++.++|++...+++.++..+. ..+...++.++|+|||++|+|||||+..
T Consensus 96 ~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 174 (500)
T 1o04_A 96 ERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI-DGDFFSYTRHEPVGVCGQIIPWNFPLLM 174 (500)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceec-CCCceEEEEEecCCcEEEECCCCchHHH
Confidence 45567779999999999999875 699999999999999887776654332 2355678999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|.+.+.+..|+.||+|+.|+||||+.+|+.|+
T Consensus 175 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~ 254 (500)
T 1o04_A 175 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQ 254 (500)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997778999999999999999999999999999
Q ss_pred HHhc-cccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 167 AGAA-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 167 ~~~~-~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
+.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 255 ~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 334 (500)
T 1o04_A 255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNP 334 (500)
T ss_dssp HHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCT
T ss_pred HhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCc
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
.++++++||++++.+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 335 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 414 (500)
T 1o04_A 335 FDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE 414 (500)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred ccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHH
Confidence 99999999999999999999999999999999999997642358999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 415 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~ 494 (500)
T 1o04_A 415 EVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 494 (500)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEE
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEe
Confidence 99999999999999999999999999999999999999999877678999999999999999999999999999999886
Q ss_pred c
Q 015249 406 D 406 (410)
Q Consensus 406 ~ 406 (410)
.
T Consensus 495 ~ 495 (500)
T 1o04_A 495 V 495 (500)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-88 Score=689.98 Aligned_cols=398 Identities=40% Similarity=0.676 Sum_probs=376.0
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++.+|+||++.+++.|+..+++.++|++...+++.+...+...++...++.++|+|||++|+|||||+...
T Consensus 80 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 159 (479)
T 2imp_A 80 RERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLI 159 (479)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHH
Confidence 34567779999999999999999999999999999999887766654333223556789999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.||+++.|.||||+.+|+.|++
T Consensus 160 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~ 239 (479)
T 2imp_A 160 ARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMA 239 (479)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977778999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 240 ~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 319 (479)
T 2imp_A 240 TAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAE 319 (479)
T ss_dssp HHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTT
T ss_pred HHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHH
Q 015249 248 -EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326 (410)
Q Consensus 248 -~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 326 (410)
+++++||++++.+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 320 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~e 399 (479)
T 2imp_A 320 RNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLED 399 (479)
T ss_dssp CSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHH
T ss_pred cCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHH
Confidence 9999999999999999999999999999999999975323479999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 327 ai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|.+++++|++.|+|+++
T Consensus 400 Ai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 400 AISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp HHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 9999999999999999999999999999999999999999877678999999999999999999999999999999875
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-88 Score=691.33 Aligned_cols=393 Identities=34% Similarity=0.553 Sum_probs=371.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCC-C----CcceeEEeeeceEEEEEcCCCc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATL-P----DRRLFVLKQPVGVAGAITPWNF 82 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~P~Gvv~~i~p~n~ 82 (410)
++++.++++++++|+|||+.+++.|+..+++.++|++....++.++..+... + +...++.++|+|||++|+||||
T Consensus 85 ~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~ 164 (505)
T 3prl_A 85 EERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNY 164 (505)
T ss_dssp HHTHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSS
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCcc
Confidence 3455677999999999999999999999999999999998876665433211 2 4567889999999999999999
Q ss_pred chhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHH
Q 015249 83 PLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 162 (410)
Q Consensus 83 p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~ 162 (410)
|+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|++.+.+..|+.||+||.|+||||+.+|
T Consensus 165 P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G 244 (505)
T 3prl_A 165 PVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTG 244 (505)
T ss_dssp TTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999778899999999999999999999999
Q ss_pred HHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhccc
Q 015249 163 KKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 242 (410)
Q Consensus 163 ~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~ 242 (410)
+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 245 ~~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 322 (505)
T 3prl_A 245 ERISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTV 322 (505)
T ss_dssp HHHHHHCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCB
T ss_pred HHHHHHcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhccc
Confidence 99999887 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 243 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 243 g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
|+|. +++++||++++.+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 323 g~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 398 (505)
T 3prl_A 323 GSPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVK 398 (505)
T ss_dssp SCTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeC
Confidence 9999 9999999999999999999999999999999999975 37999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 401 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~ 401 (410)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+++. ..+.+||||+|+||+|+++|.+|+++|++.|+
T Consensus 399 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~ 478 (505)
T 3prl_A 399 DANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERV 478 (505)
T ss_dssp SHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEEE
T ss_pred CHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceEE
Confidence 99999999999999999999999999999999999999999999876 56889999999999999999999999999999
Q ss_pred EEEec
Q 015249 402 VCLGD 406 (410)
Q Consensus 402 v~~~~ 406 (410)
|+++.
T Consensus 479 v~~~~ 483 (505)
T 3prl_A 479 TVLNL 483 (505)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 98863
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-88 Score=684.41 Aligned_cols=398 Identities=34% Similarity=0.518 Sum_probs=377.9
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
+++++++++++++|+||++.+++.|+..+++.++|++...+++.+.. +...++...++.++|+|||++|+|||||++..
T Consensus 65 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 143 (462)
T 3etf_A 65 RAHAEEMAQCITREMGKPIKQARAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEYRPLGVILAIMPWNFPLWQV 143 (462)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCE-ECSSGGGCEEEEEEECSEEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCCc-ccCCCCceeEEEeecCcEEEEECCCchHHHHH
Confidence 34566779999999999999999999999999999999988877654 32334567889999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|+ .+.+..|+.||+++.|+||||+.+|+.|.+
T Consensus 144 ~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aglP~gv~~vv~g~-~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~ 222 (462)
T 3etf_A 144 LRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNAN-NEGVSQMINDPRIAAVTVTGSVRAGAAIGA 222 (462)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHTTCCBTTEEECCCC-HHHHHHHHTSTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcCeEEEEECC-HHHHHHHhcCCCCCEEEEeCCchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999984 677889999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.+
T Consensus 223 ~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 302 (462)
T 3etf_A 223 QAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLV 302 (462)
T ss_dssp HHHHTTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTS
T ss_pred HHhccCCceEEEcCCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ea 327 (410)
+++++||++++.+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 303 ~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deA 382 (462)
T 3etf_A 303 EENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHA 382 (462)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred ccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHH
Confidence 99999999999999999999999999999999999754446899999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEecc
Q 015249 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 407 (410)
Q Consensus 328 i~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~~~ 407 (410)
|+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.+
T Consensus 383 i~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r~ 462 (462)
T 3etf_A 383 LALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNRV 462 (462)
T ss_dssp HHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECCC
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEecC
Confidence 99999999999999999999999999999999999999988778899999999999999999999999999999998764
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-88 Score=692.61 Aligned_cols=397 Identities=30% Similarity=0.486 Sum_probs=375.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH-HHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEE-AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
++++.++++++++|+|||+.+++.|+..+++.++|++.. .+...++..+.. .+...++.++|+|||++|+|||||+..
T Consensus 110 ~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~ 188 (538)
T 3qan_A 110 RRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILSR-PGEQNRYFYTPMGVTVTISPWNFALAI 188 (538)
T ss_dssp HHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBCCCCC-TTEEEEEEEEECCEEEEECCSTTTTHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccc-CCcceeeecCCCcEEEEECCCchHHHH
Confidence 345677799999999999999999999999999999998 666666554432 467788999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|+
T Consensus 189 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~ 268 (538)
T 3qan_A 189 MVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLY 268 (538)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998788999999999999999999999999999
Q ss_pred HHhccc------cceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhc
Q 015249 167 AGAAGT------VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL 240 (410)
Q Consensus 167 ~~~~~~------~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~ 240 (410)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++
T Consensus 269 ~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 348 (538)
T 3qan_A 269 ERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNL 348 (538)
T ss_dssp HHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTC
T ss_pred HHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhc
Confidence 999988 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeee
Q 015249 241 KVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 320 (410)
Q Consensus 241 ~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~ 320 (410)
++|+|.++++++||++++.+++++.++|++++.+| ++++||.....+|+|++|||+.+++++|++++||+||||++|++
T Consensus 349 ~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~ 427 (538)
T 3qan_A 349 TVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSK 427 (538)
T ss_dssp CBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred cCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEE
Confidence 99999999999999999999999999999999999 99999986533589999999999999999999999999999999
Q ss_pred cCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEC-CCCCC-CCCCCccCCCCCCCC-CCChHHHHHhhh
Q 015249 321 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVN-EGLIS-TEVAPFGGVKQSGLG-REGSKYGMDEFL 397 (410)
Q Consensus 321 ~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN-~~~~~-~~~~pfGg~~~SG~g-~~~g~~~l~~~~ 397 (410)
|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+|| +.+.. .+.+||||+|.||+| +++|++||++|+
T Consensus 428 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft 507 (538)
T 3qan_A 428 ANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHM 507 (538)
T ss_dssp ESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGE
T ss_pred eCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 55554 789999999999999 999999999999
Q ss_pred eeeEEEEec
Q 015249 398 EIKYVCLGD 406 (410)
Q Consensus 398 ~~k~v~~~~ 406 (410)
+.|+|+++.
T Consensus 508 ~~k~v~~~~ 516 (538)
T 3qan_A 508 QAKTVSEMY 516 (538)
T ss_dssp EEEEEEEEC
T ss_pred CeEEEEEec
Confidence 999998864
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-88 Score=689.37 Aligned_cols=396 Identities=37% Similarity=0.621 Sum_probs=374.2
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLR-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
++++.++++++.+|+|||+.+++. |+..+++.++|++...+++.++..+...++...++.++|+|||++|+|||||+..
T Consensus 96 ~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 175 (495)
T 1wnd_A 96 EENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMM 175 (495)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHH
Confidence 345667799999999999999998 9999999999999988776665433221345678899999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|++.+.+..|+.||+||.|+||||+.+|+.|+
T Consensus 176 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~ 254 (495)
T 1wnd_A 176 AAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHII 254 (495)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 9999999999999999999999999999999999999 999999999997778899999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus 255 ~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 334 (495)
T 1wnd_A 255 SHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPD 334 (495)
T ss_dssp HHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTT
T ss_pred HHHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCC-CeEeeCCc-ccCCCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKG-AKVLLGGR-RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~g-a~~~~gg~-~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
++++++||++++.+++++.+++++++++| +++++||. .. ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 335 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 413 (495)
T 1wnd_A 335 DESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNE 413 (495)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred cCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCH
Confidence 99999999999999999999999999999 99999997 43 25799999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
||||+++|+++|||+++|||+|.++++++++++++|+|+||+.....+.+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus 414 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~ 493 (495)
T 1wnd_A 414 EQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMV 493 (495)
T ss_dssp HHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEe
Confidence 99999999999999999999999999999999999999999987777899999999999999999999999999999986
Q ss_pred e
Q 015249 405 G 405 (410)
Q Consensus 405 ~ 405 (410)
+
T Consensus 494 ~ 494 (495)
T 1wnd_A 494 K 494 (495)
T ss_dssp E
T ss_pred c
Confidence 4
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-88 Score=691.97 Aligned_cols=397 Identities=25% Similarity=0.428 Sum_probs=373.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++++|+||++.+++.|+..+++.++|++.+++...++..+...++...++.++|+|||++|+|||||+...
T Consensus 100 ~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 179 (521)
T 4e4g_A 100 NDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIP 179 (521)
T ss_dssp HHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHH
Confidence 45667779999999999999999999999999999999887766554332224567889999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|+ .+.+..|+.||+|+.|+||||+.+|+.|++
T Consensus 180 ~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~ 258 (521)
T 4e4g_A 180 MWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYG 258 (521)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999995 566799999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecc-hHHHHHHHHHHHHhhcccCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++ ++|+|+++|+++++++++|+|.
T Consensus 259 ~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~ 338 (521)
T 4e4g_A 259 TAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYT 338 (521)
T ss_dssp HHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTT
T ss_pred HHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
++++++||++++.+++++.++|++++.+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 339 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 418 (521)
T 4e4g_A 339 DEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRAR 418 (521)
T ss_dssp CTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBS
T ss_pred CccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeC
Confidence 9999999999999999999999999999999999997521 358999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCC--CCChHHHHHhhhee
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG--REGSKYGMDEFLEI 399 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g--~~~g~~~l~~~~~~ 399 (410)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+++.. .+.+||||+|.||+| +++|++|+++|++.
T Consensus 419 ~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~ 498 (521)
T 4e4g_A 419 NYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRT 498 (521)
T ss_dssp SHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEEE
T ss_pred CHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhheE
Confidence 999999999999999999999999999999999999999999998654 478999999999999 78999999999999
Q ss_pred eEEEEe
Q 015249 400 KYVCLG 405 (410)
Q Consensus 400 k~v~~~ 405 (410)
|+|+++
T Consensus 499 K~v~~~ 504 (521)
T 4e4g_A 499 KTITSR 504 (521)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 999886
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-88 Score=691.01 Aligned_cols=395 Identities=34% Similarity=0.567 Sum_probs=374.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
++++.++++++.+|+||++.+++ .|+..+++.++|++...+++.++..+. ..+...++.++|+|||++|+|||||+..
T Consensus 84 ~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 162 (495)
T 3b4w_A 84 AERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRT-GSYGQSIVSREPVGVVGAIVAWNVPLFL 162 (495)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEE-ETTEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccC-CCCceEEEEEccCceEEEECCCcchHHH
Confidence 34566779999999999999998 899999999999999888776654332 1244678999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++| +.+.+..|+.||+|+.|+||||+.+|+.|+
T Consensus 163 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~ 241 (495)
T 3b4w_A 163 AVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVG 241 (495)
T ss_dssp HHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 788999999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus 242 ~~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 321 (495)
T 3b4w_A 242 RRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPS 321 (495)
T ss_dssp HHHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTT
T ss_pred HHhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~--~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
++++++||++++.+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 322 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 401 (495)
T 3b4w_A 322 DPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTE 401 (495)
T ss_dssp CTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred cCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCH
Confidence 9999999999999999999999999999999999997642 25899999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
||||+++|+++|||+++|||+|.++++++++++++|+|+||++. ..+.+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus 402 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~ 480 (495)
T 3b4w_A 402 EDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLL 480 (495)
T ss_dssp HHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEC
T ss_pred HHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEE
Confidence 99999999999999999999999999999999999999999987 77899999999999999999999999999999987
Q ss_pred e
Q 015249 405 G 405 (410)
Q Consensus 405 ~ 405 (410)
+
T Consensus 481 ~ 481 (495)
T 3b4w_A 481 P 481 (495)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-88 Score=684.97 Aligned_cols=393 Identities=35% Similarity=0.587 Sum_probs=367.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEE-eeeceEEEEEcCCCcchh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVL-KQPVGVAGAITPWNFPLA 85 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i~p~n~p~~ 85 (410)
+++++++++++.+|+|||+.+++ .|+..+++.+++++............ ..+...++. ++|+|||++|+|||||+.
T Consensus 99 ~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 176 (497)
T 3i44_A 99 EKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL--IEGNEQAILHYDAIGVVGLITPWNWPMN 176 (497)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES--STTCSSCEEEEEECCEEEEECCSSSHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc--cCCceeEEEeecCceEEEEECCCcchHH
Confidence 44566779999999999999999 79999999999999876553322111 124456778 999999999999999999
Q ss_pred hhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHH
Q 015249 86 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 165 (410)
Q Consensus 86 ~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i 165 (410)
..++++++||++||+||+|||+.+|.++..|++++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|
T Consensus 177 ~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i 256 (497)
T 3i44_A 177 QVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDI 256 (497)
T ss_dssp HHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 166 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 166 ~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
.+.+++++||+++|+|||||+||++||| +.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 257 ~~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p 335 (497)
T 3i44_A 257 SKNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPG 335 (497)
T ss_dssp HHHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCT
T ss_pred HHHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCc-ccC--CCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR-RHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~-~~~--~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
.++++++||++++.+++++.++|++++++|+++++||. ... ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 336 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 415 (497)
T 3i44_A 336 HQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFN 415 (497)
T ss_dssp TSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecC
Confidence 99999999999999999999999999999999999994 322 258999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||. ....+.+||||+|.||+|+++|.+++++||+.|+|
T Consensus 416 ~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v 494 (497)
T 3i44_A 416 TEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494 (497)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcceeEE
Confidence 99999999999999999999999999999999999999999994 45578899999999999999999999999999998
Q ss_pred EE
Q 015249 403 CL 404 (410)
Q Consensus 403 ~~ 404 (410)
+.
T Consensus 495 ~~ 496 (497)
T 3i44_A 495 SY 496 (497)
T ss_dssp SC
T ss_pred Ee
Confidence 53
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-88 Score=692.67 Aligned_cols=394 Identities=36% Similarity=0.576 Sum_probs=373.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHH----HhCccccCCCCCcceeEEeeeceEEEEEcCCCcc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKR----VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
++++.++++++++|+||++.++ |+..+++.++|++.+.++ +.++..+. .++. .++.++|+|||++|+|||||
T Consensus 88 ~~~~~ela~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~-~~~~-~~~~~~P~GVV~~I~PwN~P 163 (517)
T 3r31_A 88 RERNDALSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDYIPL-GGDF-AYTKRVPLGVCVGIGAWNYP 163 (517)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCEEEC-SSSE-EEEEEEECSEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHhhhccccccCccccc-CCCc-ceEEEcCccEEEEECCCcch
Confidence 3456677999999999999999 999999999999999887 65654443 2345 89999999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++| +.+.+..|+.||+||.|+||||+.+|+
T Consensus 164 ~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~ 242 (517)
T 3r31_A 164 QQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGR 242 (517)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 788999999999999999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 243 ~i~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 322 (517)
T 3r31_A 243 KVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILG 322 (517)
T ss_dssp HHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred HHHHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCCceecceEeccCCCCCcccccceecceeeeee
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 320 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~---~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~ 320 (410)
+|.++++++||++++.+++++.++|++++++|+++++||...+ .+|+|++|||+.+++++|++++||+||||++|++
T Consensus 323 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 402 (517)
T 3r31_A 323 DPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLD 402 (517)
T ss_dssp CTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEE
T ss_pred CCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEE
Confidence 9999999999999999999999999999999999999993121 3589999999999999999999999999999999
Q ss_pred cCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheee
Q 015249 321 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400 (410)
Q Consensus 321 ~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k 400 (410)
|+|.||||+++|+++|||+++|||+|.++++++++++++|+|+||+.+...+.+||||+|+||+|+++|++|+++|++.|
T Consensus 403 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K 482 (517)
T 3r31_A 403 FDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELK 482 (517)
T ss_dssp ECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEEEE
T ss_pred eCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceE
Confidence 99999999999999999999999999999999999999999999998877899999999999999999999999999999
Q ss_pred EEEEec
Q 015249 401 YVCLGD 406 (410)
Q Consensus 401 ~v~~~~ 406 (410)
+|+++.
T Consensus 483 ~v~~~~ 488 (517)
T 3r31_A 483 TVYVST 488 (517)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 998863
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-88 Score=687.94 Aligned_cols=397 Identities=59% Similarity=0.949 Sum_probs=376.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++.+|+||++.+++.|+..+++.++|++...+++.++..+...++...++.++|+|||++|+|||||+...
T Consensus 84 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 163 (487)
T 2w8n_A 84 IQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMI 163 (487)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHH
Confidence 34566779999999999999999999999999999999988766654433234567789999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEe---CCchhHHhHHhcCCCccEEEEeCcHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM---GNAPDIGDALLTSPQVRKITFTGSTAVGKK 164 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~---g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~ 164 (410)
++++++||++||+||+|||+.+|.++..|++++.++|+|+|++|+++ |++.+.+..|+.||+|+.|+||||+.+|+.
T Consensus 164 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~ 243 (487)
T 2w8n_A 164 TRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKI 243 (487)
T ss_dssp HHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999 866778999999999999999999999999
Q ss_pred HHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhh-cccC
Q 015249 165 LMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVG 243 (410)
Q Consensus 165 i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~-~~~g 243 (410)
|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++++ +++|
T Consensus 244 i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G 323 (487)
T 2w8n_A 244 LLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVG 323 (487)
T ss_dssp HHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBS
T ss_pred HHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCc-eecceEeccCCCCCcccccceecceeeeeecC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT-FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~-~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
+|.++++++||++++.+++++.+++++++++|+++++||... ..|+ |++|||+.+++++|++++||+||||++|++|+
T Consensus 324 ~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 402 (487)
T 2w8n_A 324 NGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFD 402 (487)
T ss_dssp CTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEES
T ss_pred CcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEEeC
Confidence 999999999999999999999999999999999999999764 2578 99999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
|.||||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|++.|+|
T Consensus 403 ~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v 482 (487)
T 2w8n_A 403 TEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYV 482 (487)
T ss_dssp CHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTGGGGGEEEEEE
T ss_pred CHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHHHHhcCccEE
Confidence 99999999999999999999999999999999999999999999887777899999999999999999999999999999
Q ss_pred EEe
Q 015249 403 CLG 405 (410)
Q Consensus 403 ~~~ 405 (410)
+++
T Consensus 483 ~~~ 485 (487)
T 2w8n_A 483 CYG 485 (487)
T ss_dssp EEC
T ss_pred EEe
Confidence 875
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-87 Score=682.11 Aligned_cols=390 Identities=38% Similarity=0.639 Sum_probs=370.2
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
.++++++++++++|+|||+.+++.|+..+++.++|++...+++.++..+. ++...++.++|+|||++|+|||||+...
T Consensus 70 ~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 147 (486)
T 3pqa_A 70 KEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPS--DDRLIFTRREPVGIVGAITPFNFPLNLS 147 (486)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC--TTEEEEEEEEECSEEEEEECSSSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecC--CCceeEEEEccccEEEEECCCchHHHHH
Confidence 44566779999999999999999999999999999999998876654432 2567889999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~a----glP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
++++++||++||+||+|||+.+|.++..+.+++.++ |+|+|++|+++|++.+.+..|+.||+||.|+||||+.+|+
T Consensus 148 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~ 227 (486)
T 3pqa_A 148 AHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGE 227 (486)
T ss_dssp HHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHH
Confidence 999999999999999999999999999999999999 9999999999998778899999999999999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 228 ~i~~~aa--~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 305 (486)
T 3pqa_A 228 LITKKAG--FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVG 305 (486)
T ss_dssp HHHHHCC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBS
T ss_pred HHHHHcC--CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccC
Confidence 9999887 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+|.++++++||++++.+++++.+++++++.+|+++++||... |+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 306 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~---g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~ 381 (486)
T 3pqa_A 306 NPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRD---KALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE 381 (486)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEE---TTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH
T ss_pred CCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCCC---CcEeccEEE-eCCCCChhhcccccccEEEEEEEcH
Confidence 999999999999999999999999999999999999999753 799999999 9999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
||||+++|+++|||+++|||+|.++++++++++++|+|+||+++. ..+.+||||+|+||+|+++|.+|+++|++.|+|
T Consensus 382 -deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v 460 (486)
T 3pqa_A 382 -EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTI 460 (486)
T ss_dssp -HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEE
T ss_pred -HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEE
Confidence 999999999999999999999999999999999999999999875 345899999999999999999999999999999
Q ss_pred EEec
Q 015249 403 CLGD 406 (410)
Q Consensus 403 ~~~~ 406 (410)
+++.
T Consensus 461 ~~~~ 464 (486)
T 3pqa_A 461 IISK 464 (486)
T ss_dssp EEEC
T ss_pred EEcC
Confidence 8863
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-87 Score=681.61 Aligned_cols=396 Identities=31% Similarity=0.476 Sum_probs=370.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc-CCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIP-ATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
++++.++++++.+|+|||+.+++.|+..+++.++|++...+++.+...+ ...++...++.++|+|||++|+|||||+..
T Consensus 110 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 189 (516)
T 1uzb_A 110 RRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAI 189 (516)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHH
Confidence 3456677999999999999999999999999999999998887765432 222456678999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|+++..|.+++.++|+|+|++|+++|.+.+.+..|+.||+|+.|+||||+.+|+.|+
T Consensus 190 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~ 269 (516)
T 1uzb_A 190 FTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIY 269 (516)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997778899999999999999999999999999
Q ss_pred HHhc------cccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhc
Q 015249 167 AGAA------GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL 240 (410)
Q Consensus 167 ~~~~------~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~ 240 (410)
+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++
T Consensus 270 ~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 349 (516)
T 1uzb_A 270 EAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERL 349 (516)
T ss_dssp HHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTC
T ss_pred HHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhc
Confidence 9988 7899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeee
Q 015249 241 KVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 320 (410)
Q Consensus 241 ~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~ 320 (410)
++|+| ++++++||++++.+++++.+++++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++
T Consensus 350 ~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~ 427 (516)
T 1uzb_A 350 SVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIR 427 (516)
T ss_dssp CBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEE
T ss_pred cCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEE
Confidence 99999 99999999999999999999999999998 89999975323579999999999999999999999999999999
Q ss_pred cCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCCCCCCCCC-CChHHHHHhhh
Q 015249 321 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGR-EGSKYGMDEFL 397 (410)
Q Consensus 321 ~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pfGg~~~SG~g~-~~g~~~l~~~~ 397 (410)
|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+.+. ..+.+||||+|.||+|+ ++|.+++++|+
T Consensus 428 ~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~ 507 (516)
T 1uzb_A 428 VKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFL 507 (516)
T ss_dssp ESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTE
T ss_pred eCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcC
Confidence 9999999999999999999999999999999999999999999998654 35789999999999995 79999999999
Q ss_pred eeeEEEEe
Q 015249 398 EIKYVCLG 405 (410)
Q Consensus 398 ~~k~v~~~ 405 (410)
+.|+|+++
T Consensus 508 ~~k~v~~~ 515 (516)
T 1uzb_A 508 EMKAVAER 515 (516)
T ss_dssp EEEEEEEE
T ss_pred CeeEEEec
Confidence 99999874
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-87 Score=682.07 Aligned_cols=397 Identities=28% Similarity=0.452 Sum_probs=369.9
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++.+|+|||+.+++.|+..+++.++|++...+++.++..+...++...++.++|+|||++|+|||||+...
T Consensus 95 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 174 (500)
T 2j6l_A 95 REKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVY 174 (500)
T ss_dssp HHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHH
Confidence 34556679999999999999999999999999999999887665554333223455678899999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELAL----QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~----~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
++++++||++||+||+|||+.+|.++..+.+++. ++|+|+|++|+++| +.+.+..|+.||+||+|+||||+.+|+
T Consensus 175 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~ 253 (500)
T 2j6l_A 175 GWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGK 253 (500)
T ss_dssp HHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHH
T ss_pred HHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHH
Confidence 9999999999999999999999999998888765 56999999999999 778899999999999999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 254 ~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 333 (500)
T 2j6l_A 254 QVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVG 333 (500)
T ss_dssp HHHHHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBS
T ss_pred HHHHHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+|.++++++||++++.+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 334 ~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 413 (500)
T 2j6l_A 334 NPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQN 413 (500)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECC
T ss_pred CcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCC
Confidence 99999999999999999999999999999999999999976323579999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHH--hhcceeEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheee
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVS--EALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~--~~~~~g~v~iN~~~~-~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k 400 (410)
+||||+++|+++|||+++|||+|.+++++++ +++++|+|+||+.+. ..+.+||||+|.||+|+++|.+|+++|++.|
T Consensus 414 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k 493 (500)
T 2j6l_A 414 EEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRS 493 (500)
T ss_dssp HHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhceE
Confidence 9999999999999999999999999999999 779999999998765 3578999999999999999999999999999
Q ss_pred EEEEe
Q 015249 401 YVCLG 405 (410)
Q Consensus 401 ~v~~~ 405 (410)
+|+++
T Consensus 494 ~v~~~ 498 (500)
T 2j6l_A 494 TCTIN 498 (500)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99875
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-87 Score=677.59 Aligned_cols=392 Identities=33% Similarity=0.551 Sum_probs=369.5
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCC----cce-eEEeeeceEEEEEcCCCc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPD----RRL-FVLKQPVGVAGAITPWNF 82 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~Gvv~~i~p~n~ 82 (410)
++++.++++++.+|+||++.+++.|+..+++.++|++...+++.++..+...++ ... ++.++|+|||++|+||||
T Consensus 76 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 155 (475)
T 1euh_A 76 MRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNY 155 (475)
T ss_dssp HHTHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTS
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCc
Confidence 345567799999999999999999999999999999998877665543322234 456 899999999999999999
Q ss_pred chhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHH
Q 015249 83 PLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 162 (410)
Q Consensus 83 p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~ 162 (410)
|+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.+..|+.||+++.|+||||+.+|
T Consensus 156 P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g 235 (475)
T 1euh_A 156 PVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIG 235 (475)
T ss_dssp TTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHH
T ss_pred hHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHH
Confidence 99999999999999999999999999999999999999999999999999999767789999999999999999999999
Q ss_pred HHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhccc
Q 015249 163 KKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 242 (410)
Q Consensus 163 ~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~ 242 (410)
+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++
T Consensus 236 ~~i~~~aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 313 (475)
T 1euh_A 236 ERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTI 313 (475)
T ss_dssp HHHHHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCB
T ss_pred HHHHHhcC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccC
Confidence 99999887 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 243 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 243 g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
|+|.+ ++++||++++.+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 314 g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~ 389 (475)
T 1euh_A 314 GNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVT 389 (475)
T ss_dssp SCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecC
Confidence 99999 999999999999999999999999999999999975 37999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECC-CCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE-GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 401 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~-~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~ 401 (410)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+ +....+.+||||+|+||+|+++|.+|+++|++.|+
T Consensus 390 ~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~ 469 (475)
T 1euh_A 390 SVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKS 469 (475)
T ss_dssp CHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEE
T ss_pred CHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHHHHhCCeeE
Confidence 99999999999999999999999999999999999999999999 66667899999999999999999999999999999
Q ss_pred EEEe
Q 015249 402 VCLG 405 (410)
Q Consensus 402 v~~~ 405 (410)
|+++
T Consensus 470 v~~~ 473 (475)
T 1euh_A 470 VVFD 473 (475)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9875
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-87 Score=680.02 Aligned_cols=397 Identities=31% Similarity=0.542 Sum_probs=353.8
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC-CCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPAT-LPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
++++.++++++++|+||++.+++.|+..+++.++|++...+++.++..+.. .++...++.++|+|||++|+|||||+..
T Consensus 80 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 159 (485)
T 4dng_A 80 HENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNL 159 (485)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHH
Confidence 345667799999999999999999999999999999999887666544432 3457789999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 165 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~-~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i 165 (410)
.++++++||++||+||+|||+.+|.++ ..|.+++.++|+|+|++|+++|++.+.+..|+.||+++.|+||||+.+|+.|
T Consensus 160 ~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i 239 (485)
T 4dng_A 160 SMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHI 239 (485)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHH
Confidence 999999999999999999999999999 9999999999999999999999877799999999999999999999999999
Q ss_pred HHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 166 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 166 ~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
.+.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 240 ~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~ 319 (485)
T 4dng_A 240 GEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQ 319 (485)
T ss_dssp HHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCT
T ss_pred HHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
.++++++||++++.+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 320 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~ 396 (485)
T 4dng_A 320 TDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQ 396 (485)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHH
T ss_pred CcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHH
Confidence 999999999999999999999999999999999999976 37999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
|||+++|+++|||+++|||+|.++++++++++++|+|+||+++.. .+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 397 eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~ 476 (485)
T 4dng_A 397 EAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISI 476 (485)
T ss_dssp HHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHHHHHEEEEEEEE
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEE
Confidence 999999999999999999999999999999999999999998753 7889999999999999999999999999999998
Q ss_pred ecc
Q 015249 405 GDM 407 (410)
Q Consensus 405 ~~~ 407 (410)
+..
T Consensus 477 ~~~ 479 (485)
T 4dng_A 477 QKQ 479 (485)
T ss_dssp EC-
T ss_pred ecC
Confidence 753
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-87 Score=682.29 Aligned_cols=392 Identities=32% Similarity=0.511 Sum_probs=370.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC--CC--CcceeEEeeeceEEEEEcCCCcc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPAT--LP--DRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
++++.++++++.+|+|||+.+++.|+..+++.++|++...+++.++..+.. .. +...++.++|+|||++|+|||||
T Consensus 91 ~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 170 (501)
T 1uxt_A 91 ERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYP 170 (501)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTST
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccH
Confidence 345667799999999999999999999999999999998887766543321 12 33678999999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++ +.+..|+.||+||.|+||||+.+|+
T Consensus 171 ~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~ 249 (501)
T 1uxt_A 171 LFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGE 249 (501)
T ss_dssp THHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHH
Confidence 999999999999999999999999999999999999999999999999999976 8899999999999999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 250 ~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 327 (501)
T 1uxt_A 250 RVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVG 327 (501)
T ss_dssp HHHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred HHHHhcC--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCC
Confidence 9999887 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCC-ceecceEeccCC---CCCcccccceecceeeee
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM-TFYEPTVLSNVK---SEMLVSREEVFGPVAPLL 319 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~-~~~~Ptv~~~~~---~~~~~~~eE~fgPvl~v~ 319 (410)
+|.++++++||++++.+++++.+++++++++|+++++||.. .| +|++|||+.+++ ++|++++||+||||++|+
T Consensus 328 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~ 404 (501)
T 1uxt_A 328 DPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAV 404 (501)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEE
T ss_pred CccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEE
Confidence 99999999999999999999999999999999999999975 36 899999999999 999999999999999999
Q ss_pred ecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCC-CCCCCCCCccCCCCCCCCCCChHHHHHhhhe
Q 015249 320 CFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG-LISTEVAPFGGVKQSGLGREGSKYGMDEFLE 398 (410)
Q Consensus 320 ~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~-~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~ 398 (410)
+|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++ ....+.+||||+|+||+|+++|.+++++|++
T Consensus 405 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~ 484 (501)
T 1uxt_A 405 EVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTA 484 (501)
T ss_dssp EESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEE
T ss_pred eeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhCc
Confidence 999999999999999999999999999999999999999999999998 5567899999999999999999999999999
Q ss_pred eeEEEEe
Q 015249 399 IKYVCLG 405 (410)
Q Consensus 399 ~k~v~~~ 405 (410)
.|+|+++
T Consensus 485 ~k~v~~~ 491 (501)
T 1uxt_A 485 YKTIVFN 491 (501)
T ss_dssp EEEEEEE
T ss_pred eeEEEEe
Confidence 9999885
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-87 Score=681.22 Aligned_cols=396 Identities=34% Similarity=0.572 Sum_probs=358.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC-CCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPAT-LPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
++++.++++++++|+||++.+++.|+..+++.++|++...++..+ ..+.. .++...++.++|+|||++|+|||||+..
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 164 (508)
T 3r64_A 86 EEHREEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNL 164 (508)
T ss_dssp HHTHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHH
Confidence 345677799999999999999999999999999999998876555 33322 3457789999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 165 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~-~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i 165 (410)
.++++++||++||+||+|||+.+|.++ ..+.+++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|
T Consensus 165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i 244 (508)
T 3r64_A 165 SIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRV 244 (508)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHH
Confidence 999999999999999999999999999 9999999999999999999999778899999999999999999999999999
Q ss_pred HHHhcc--ccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 166 MAGAAG--TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 166 ~~~~~~--~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|
T Consensus 245 ~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 324 (508)
T 3r64_A 245 GELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTG 324 (508)
T ss_dssp HHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred HHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCC
Confidence 999988 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+|.++++++||++++.+++++.+++++++++|+++++||.. .++|++|||+.+++++|++++||+||||++|++|+|
T Consensus 325 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 401 (508)
T 3r64_A 325 DPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADD 401 (508)
T ss_dssp CTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESS
T ss_pred CCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeCC
Confidence 99999999999999999999999999999999999999976 379999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
+||||+++|+++|||+++|||+|.++++++++++++|+|+||+++.. .+.+||||+|.||+|+++|++++++|++.|+|
T Consensus 402 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v 481 (508)
T 3r64_A 402 EAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWI 481 (508)
T ss_dssp HHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHHHHHTEEEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999999998754 68899999999999999999999999999999
Q ss_pred EEecc
Q 015249 403 CLGDM 407 (410)
Q Consensus 403 ~~~~~ 407 (410)
+++..
T Consensus 482 ~~~~~ 486 (508)
T 3r64_A 482 GIKRS 486 (508)
T ss_dssp EEECC
T ss_pred EEecc
Confidence 98753
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-86 Score=672.78 Aligned_cols=397 Identities=29% Similarity=0.483 Sum_probs=371.2
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
+++++++++++.+|+||++.+++.|+..+++.++|++.+.+...++..+...++...++.++|+|||++|+|||||+...
T Consensus 79 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 158 (486)
T 1t90_A 79 SQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVP 158 (486)
T ss_dssp HTTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHH
Confidence 34566779999999999999999999999999999998877766654321223556788999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++| +.+.+..|+.||+|+.|+||||+.+|+.|++
T Consensus 159 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~ 237 (486)
T 1t90_A 159 CWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYK 237 (486)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998 4678999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCe-EEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANR-VLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~-v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ +|+|+++|+++++++++|+|.
T Consensus 238 ~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~ 316 (486)
T 1t90_A 238 KGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGL 316 (486)
T ss_dssp HHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTT
T ss_pred HHhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCC
Confidence 999999999999999999999999999999999999999999999999999 999999 999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~-~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
++++++||++++.+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 317 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~ 396 (486)
T 1t90_A 317 DDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLK 396 (486)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred ccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHH
Confidence 9999999999999999999999999999999999997432 357999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCC--CCChHHHHHhhheeeEE
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG--REGSKYGMDEFLEIKYV 402 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g--~~~g~~~l~~~~~~k~v 402 (410)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++... .+.+||||+|.||+| +++|.+|+++|++.|+|
T Consensus 397 eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v 476 (486)
T 1t90_A 397 EAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVV 476 (486)
T ss_dssp HHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEE
T ss_pred HHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEE
Confidence 999999999999999999999999999999999999999986543 578999999999999 89999999999999999
Q ss_pred EEec
Q 015249 403 CLGD 406 (410)
Q Consensus 403 ~~~~ 406 (410)
+++.
T Consensus 477 ~~~~ 480 (486)
T 1t90_A 477 TARY 480 (486)
T ss_dssp EEEC
T ss_pred EEec
Confidence 8863
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-86 Score=672.14 Aligned_cols=390 Identities=36% Similarity=0.602 Sum_probs=346.7
Q ss_pred HHHHHHHHHHHHHHhhchHHHH-HHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLL-LREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a-~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
++++.++++++.+|+||++.++ +.|+..+++.++|++....++.+.. .....++.++|+|||++|+|||||+..
T Consensus 81 ~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~-----~~~~~~~~~~P~GVv~~I~PwN~P~~~ 155 (478)
T 3ty7_A 81 ENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEE-----RRGDDLVVKEAIGVSGLITPWNFPTNQ 155 (478)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEE-----EETTEEEEEEECCCEEEECCSSSTTHH
T ss_pred HHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhccc-----CCccceEEecCceEEEEECCCcchHHH
Confidence 3455677999999999999999 7899999999999999887765532 134678899999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|.
T Consensus 156 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~ 235 (478)
T 3ty7_A 156 TSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIM 235 (478)
T ss_dssp HHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--
T ss_pred HHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998788999999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.++++.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.
T Consensus 236 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 315 (478)
T 3ty7_A 236 EKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPR 315 (478)
T ss_dssp CSTTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTT
T ss_pred HHHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~---~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
++++++||++++++++++.+++++++++|+++++||.... ..|+|++|||+.++++++++++||+||||++|++|+|
T Consensus 316 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~ 395 (478)
T 3ty7_A 316 EDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYND 395 (478)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCC
Confidence 9999999999999999999999999999999999994321 3589999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
.||||+++|+++|||+++|||+|.+.++++++++++|+|+||+ ....+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 396 ~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~ 474 (478)
T 3ty7_A 396 LDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474 (478)
T ss_dssp HHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CCGGGEEEEEEE
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEE
Confidence 9999999999999999999999999999999999999999999 555678999999999999999999999999999986
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-84 Score=667.90 Aligned_cols=396 Identities=24% Similarity=0.356 Sum_probs=367.9
Q ss_pred HHHHHHHHHHHhhchHHHHHHH-HHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhhh
Q 015249 11 KMLYLRLLMRLILGASSLLLRE-VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 89 (410)
Q Consensus 11 ~~~~~~~~~~e~g~~~~~a~~e-i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~~ 89 (410)
+.+++.++++|+||++.+++.| +..+++.++|++....++.+........+...+.++.|+|||++|+|||||+....+
T Consensus 140 ~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~ 219 (563)
T 4e3x_A 140 RAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNL 219 (563)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHHHH
Confidence 5677889999999999999987 999999999999999888775432222334456778888999999999999999999
Q ss_pred hccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHHh
Q 015249 90 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 169 (410)
Q Consensus 90 ~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~ 169 (410)
++++|| +||+||+|||+.+|.++..++++|.++|+|+|++|+++|++.+.+..|+.||+|+.|.||||+.+|+.|.+.+
T Consensus 220 ~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~a 298 (563)
T 4e3x_A 220 AGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQV 298 (563)
T ss_dssp HHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 999999 5999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred ccccc------eeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 170 AGTVK------KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 170 ~~~~~------~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
+++++ |+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 299 a~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vG 378 (563)
T 4e3x_A 299 AQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVG 378 (563)
T ss_dssp HHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBS
T ss_pred HhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCC
Confidence 98887 599999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCccccccCCHHHHHHHHHHHHHHHH-CCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeec
Q 015249 244 DG-FGEGVVQGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 321 (410)
Q Consensus 244 ~~-~~~~~~~gp~~~~~~~~~~~~~i~~~~~-~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~ 321 (410)
+| .|+++++||++++.+++++.++|+++++ +|+++++||..+...|+|++|||+.+++++|++++||+||||++|++|
T Consensus 379 dp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~ 458 (563)
T 4e3x_A 379 DPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVY 458 (563)
T ss_dssp CTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEE
T ss_pred CcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEE
Confidence 99 9999999999999999999999999996 899999999865446899999999999999999999999999999999
Q ss_pred CC--HHHHHHHh-hcCCCCcEEEEecCCHHHHHHHHhhcc--eeEEEECCCCC--CCCCCCccCCCCCCCC-CCChHHHH
Q 015249 322 KT--EEEAIHMA-NDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLI--STEVAPFGGVKQSGLG-REGSKYGM 393 (410)
Q Consensus 322 ~~--~~eai~~~-n~~~~gl~~sv~s~d~~~~~~~~~~~~--~g~v~iN~~~~--~~~~~pfGg~~~SG~g-~~~g~~~l 393 (410)
+| +||||+++ |+++|||+++|||+|.+.+++++++++ +|+|+||+.+. ..+.+||||+|.||+| +.+|+++|
T Consensus 459 ~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l 538 (563)
T 4e3x_A 459 PDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYI 538 (563)
T ss_dssp CGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGG
T ss_pred CCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHH
Confidence 97 69999999 789999999999999999999999976 99999999764 3578999999999998 78999999
Q ss_pred HhhheeeEEEEecc
Q 015249 394 DEFLEIKYVCLGDM 407 (410)
Q Consensus 394 ~~~~~~k~v~~~~~ 407 (410)
++|++.|+|..+-+
T Consensus 539 ~~~~~~k~v~~~~~ 552 (563)
T 4e3x_A 539 LRWTSPQVIKETHK 552 (563)
T ss_dssp GGGBCCEEEEEECS
T ss_pred HHhCceEEEEEeCc
Confidence 99999999987643
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-84 Score=655.36 Aligned_cols=389 Identities=29% Similarity=0.467 Sum_probs=358.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccc---CCCCCcceeEEeeeceEEEEEcCCCcc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIP---ATLPDRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
+++++++++++.+|+||++.+++ .|+..++..++|++.....+...... ....+...++.++|+|||++|+|||||
T Consensus 54 ~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 133 (469)
T 3sza_A 54 QEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYP 133 (469)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSST
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcch
Confidence 44566779999999999999998 59999999998887766554332111 111245678999999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|+ .+.+..|+.| ++|.|+||||+.+|+
T Consensus 134 ~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g~-~~~~~~ll~~-~vd~I~FTGS~~vG~ 210 (469)
T 3sza_A 134 FNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVINGG-VPETTELLKE-RFDHILYTGSTGVGK 210 (469)
T ss_dssp THHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-SCTTTSCBCCCS-HHHHHHHTTS-CCSEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCcceEEEEECC-HHHHHHHHhc-CCCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 999999999984 4556678877 899999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++ +|
T Consensus 211 ~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g 289 (469)
T 3sza_A 211 IIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YG 289 (469)
T ss_dssp HHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HC
T ss_pred HHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998 69
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+|.++++++||++++.+++++.+++ +|+++++||..+ .+|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 290 ~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 363 (469)
T 3sza_A 290 EDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRS 363 (469)
T ss_dssp SCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSS
T ss_pred CCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCC
Confidence 9999999999999999999999998 599999999865 4689999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 401 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~ 401 (410)
+||||+++|+++|||+++|||+|.++++++++++++|+|+||+... ..+.+||||+|+||+|+++|.+|+++||+.|+
T Consensus 364 ~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~ 443 (469)
T 3sza_A 364 LEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRS 443 (469)
T ss_dssp HHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEE
T ss_pred HHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeE
Confidence 9999999999999999999999999999999999999999999863 46889999999999999999999999999999
Q ss_pred EEEec
Q 015249 402 VCLGD 406 (410)
Q Consensus 402 v~~~~ 406 (410)
|+++.
T Consensus 444 v~~~~ 448 (469)
T 3sza_A 444 CLVRP 448 (469)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99874
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-84 Score=655.61 Aligned_cols=394 Identities=29% Similarity=0.428 Sum_probs=367.0
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-ccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEI-IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++++++++++|+||+. ++..|+..+++.+++++..+.+..... .....++...+..++|+|||++|+|||||+...
T Consensus 65 ~~~~ela~~~~~e~Gk~~-~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~ 143 (474)
T 4h7n_A 65 SRREQLTEALVNDTGRLS-ITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLS 143 (474)
T ss_dssp TTHHHHHHHHHHHHSCSH-HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHH
T ss_pred HHHHHHHHHHHHHcCCcH-HHHHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHH
Confidence 345667999999999974 566799999999999998887765432 222335566778899999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++| +.+.+..|+.| ++.|+||||+.+|+.|++
T Consensus 144 ~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~ 220 (474)
T 4h7n_A 144 MIDTIPALLAGCAVVVKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAE 220 (474)
T ss_dssp HTTHHHHHHHTCEEEEEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHH
T ss_pred hcccCcchhcCCceeecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhh
Confidence 999999999999999999999999999999999999999999999998 56788888875 899999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.+
T Consensus 221 ~aa~~~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 300 (474)
T 4h7n_A 221 TAARRFIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLV 300 (474)
T ss_dssp HHHHHTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSG
T ss_pred hhhcccccccccCCCcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceecceEeccCCCCCcccccceecceeeeeecCCHHH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~-~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 326 (410)
+++++||++++.+++++.+++++++++|+++++||...+ .+|+|++|||+.+++++|++++||+||||++|++|+|.||
T Consensus 301 ~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~de 380 (474)
T 4h7n_A 301 EDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEE 380 (474)
T ss_dssp GGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHH
T ss_pred cccccCccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHH
Confidence 999999999999999999999999999999999998654 5689999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCCCCCCCC-CCChHHHHHhhheeeEEE
Q 015249 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 327 ai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pfGg~~~SG~g-~~~g~~~l~~~~~~k~v~ 403 (410)
||+++|+++|||+++|||+|.++++++++++++|+|+||+.+. ..+..||||+|.||+| +++|.+|+++|++.|+|+
T Consensus 381 Ai~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~ 460 (474)
T 4h7n_A 381 AVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFL 460 (474)
T ss_dssp HHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEE
T ss_pred HHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEE
Confidence 9999999999999999999999999999999999999998765 3578999999999998 789999999999999999
Q ss_pred Eec
Q 015249 404 LGD 406 (410)
Q Consensus 404 ~~~ 406 (410)
++.
T Consensus 461 ~~~ 463 (474)
T 4h7n_A 461 IKT 463 (474)
T ss_dssp EEC
T ss_pred ECC
Confidence 874
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-83 Score=689.17 Aligned_cols=397 Identities=30% Similarity=0.450 Sum_probs=374.3
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~ 88 (410)
+++.+++.++++|+||++.+++.|+..++++++||+..++++.+...+...++..+++.++|+|||++|+|||||+...+
T Consensus 605 ~~~~eLa~~~~~E~GK~~~ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~ 684 (1026)
T 4f9i_A 605 KRLFELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISM 684 (1026)
T ss_dssp HTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHH
Confidence 45667799999999999999999999999999999999988766544332357778899999999999999999999999
Q ss_pred hhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHH
Q 015249 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 168 (410)
Q Consensus 89 ~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~ 168 (410)
+++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|.+.
T Consensus 685 ~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~ 764 (1026)
T 4f9i_A 685 GMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIER 764 (1026)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred hc------cccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhccc
Q 015249 169 AA------GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 242 (410)
Q Consensus 169 ~~------~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~ 242 (410)
++ ++.+|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++++|||++++|+|+++|+++++++++
T Consensus 765 aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~v 844 (1026)
T 4f9i_A 765 AAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKV 844 (1026)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred hhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhccc
Confidence 87 467999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 243 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 243 g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
|+|.++++++||++++.+++++.++|++++.+| ++++||..+...|+|++|||+.++++++++++||+||||++|++|+
T Consensus 845 G~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 923 (1026)
T 4f9i_A 845 GPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAK 923 (1026)
T ss_dssp CCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeC
Confidence 999999999999999999999999999999998 9999997653348999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCccCCCCCCCCC-CChHHHHHhhhee
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGR-EGSKYGMDEFLEI 399 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~--~~~~pfGg~~~SG~g~-~~g~~~l~~~~~~ 399 (410)
|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.+.. .+.+||||+|.||+|+ .+|+++|++|++.
T Consensus 924 d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~ 1003 (1026)
T 4f9i_A 924 DFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDP 1003 (1026)
T ss_dssp SHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEE
T ss_pred CHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceE
Confidence 999999999999999999999999999999999999999999998653 4789999999999995 5999999999999
Q ss_pred eEEEEec
Q 015249 400 KYVCLGD 406 (410)
Q Consensus 400 k~v~~~~ 406 (410)
|+|+++.
T Consensus 1004 k~v~~~~ 1010 (1026)
T 4f9i_A 1004 RVVTENT 1010 (1026)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9998864
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-83 Score=643.83 Aligned_cols=386 Identities=27% Similarity=0.414 Sum_probs=357.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCcc-cc--CCCCCcceeEEeeeceEEEEEcCCCcc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEI-IP--ATLPDRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
.++++++++++.+|+||++.+++ .|+..+++.++|++.....+.... .+ ....+...++.++|+|||++|+|||||
T Consensus 64 ~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 143 (457)
T 3lns_A 64 INNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYP 143 (457)
T ss_dssp HTTHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSST
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcch
Confidence 34556779999999999999999 599999999999998887765422 11 111345688999999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++| +.+.+..|+. ++||.|+||||+.+|+
T Consensus 144 ~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~ 220 (457)
T 3lns_A 144 VNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGK 220 (457)
T ss_dssp THHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 99999999999 6778899998 7899999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
.|.+.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 221 ~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~-- 298 (457)
T 3lns_A 221 VVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL-- 298 (457)
T ss_dssp HHHHHHHTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHhhccCceEEECCCCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
|.++ ++||++++++++++.++++++ ++++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 299 -p~~~--~~gpli~~~~~~rv~~~i~~a---~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 371 (457)
T 3lns_A 299 -PEIN--STGKLVTERQVQRLVSLLEAT---QGQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDS 371 (457)
T ss_dssp -CSTT--TTCCCSSHHHHHHHHHHHHHC---CSEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESC
T ss_pred -CCcc--cccCCCCHHHHHHHHHHHHhc---CCeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCC
Confidence 6666 899999999999999999985 36999999754 3579999999999999999999999999999999999
Q ss_pred HHHHHHHhhc-CCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheee
Q 015249 324 EEEAIHMAND-TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400 (410)
Q Consensus 324 ~~eai~~~n~-~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k 400 (410)
+||||+++|+ ++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|
T Consensus 372 ~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k 451 (457)
T 3lns_A 372 VRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKK 451 (457)
T ss_dssp HHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEE
T ss_pred HHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCee
Confidence 9999999999 999999999999999999999999999999999864 4788999999999999999999999999999
Q ss_pred EEEEe
Q 015249 401 YVCLG 405 (410)
Q Consensus 401 ~v~~~ 405 (410)
+|++.
T Consensus 452 ~v~~~ 456 (457)
T 3lns_A 452 SVRIV 456 (457)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99863
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-82 Score=646.32 Aligned_cols=390 Identities=29% Similarity=0.404 Sum_probs=364.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++++|+||++.+++.|+..+++.++|++...+...+...+.. .+...++.++|+|||++|+|||||+...
T Consensus 78 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 156 (490)
T 3ju8_A 78 KSRADELARVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGPL-ADATAVLRHKPHGVVAVFGPYNFPGHLP 156 (490)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEEEE-TTEEEEEEEEECSEEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCCeeeEEECCCCEEEEECCCcchHHHH
Confidence 345667799999999999999999999999999999998877766543211 2445677899999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++| +.+.+..|+.||+|+.|+||||+.+|+.|++
T Consensus 157 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~ 235 (490)
T 3ju8_A 157 NGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHS 235 (490)
T ss_dssp HHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 5788999999999999999999999999999
Q ss_pred Hhcccccee-eeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecch-HHHHHHHHHHHHhhcccCC-
Q 015249 168 GAAGTVKKV-SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI-YEKFADAFSKAVKNLKVGD- 244 (410)
Q Consensus 168 ~~~~~~~~~-~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~-~~~f~~~L~~~~~~~~~g~- 244 (410)
.++++++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|+++++++++|+
T Consensus 236 ~aa~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~ 315 (490)
T 3ju8_A 236 QFGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRF 315 (490)
T ss_dssp HTTTCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCT
T ss_pred HhhccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCC
Confidence 999999998 8999999999999999999999999999999999999999999999996 9999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 245 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 245 ~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
|.++++++||++++.+++++.+++++++++|+++++||...+.+|+|++|||+. +++++++++||+||||++|++|+|+
T Consensus 316 ~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~ 394 (490)
T 3ju8_A 316 DEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDF 394 (490)
T ss_dssp TCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSH
T ss_pred CCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCH
Confidence 999999999999999999999999999999999999997654568999999998 9999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
||||+++|+++|||+++|||+|.++++++++++++|+|+||+++. ..+.+||||+|.||++ ++++|++.|+|+
T Consensus 395 ~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~ 468 (490)
T 3ju8_A 395 AAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYCA 468 (490)
T ss_dssp HHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHE
T ss_pred HHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEEEE
Confidence 999999999999999999999999999999999999999999875 4578999999999984 589999999988
Q ss_pred Eec
Q 015249 404 LGD 406 (410)
Q Consensus 404 ~~~ 406 (410)
+..
T Consensus 469 ~~~ 471 (490)
T 3ju8_A 469 YPV 471 (490)
T ss_dssp EEE
T ss_pred Eec
Confidence 753
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-81 Score=645.09 Aligned_cols=394 Identities=21% Similarity=0.290 Sum_probs=354.9
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCc-------cccCCCCC-cceeEEeeec-eEEEEEc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGE-------IIPATLPD-RRLFVLKQPV-GVAGAIT 78 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~P~-Gvv~~i~ 78 (410)
+++++++++++.+|+|||+.+++.|+..+++.++||+...+.+.+. ..+...++ ...+..++|+ |||++|+
T Consensus 80 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~ 159 (534)
T 2y53_A 80 QAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFIN 159 (534)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEEC
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEEC
Confidence 4456777999999999999999999999999999999988665431 11211122 2357889997 9999999
Q ss_pred CCCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHhHHhcCCCccEEEEeC
Q 015249 79 PWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTG 157 (410)
Q Consensus 79 p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~ag-lP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftG 157 (410)
|||||++..++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|+++|++.+.+..| ++++.|+|||
T Consensus 160 PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTG 236 (534)
T 2y53_A 160 AFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTG 236 (534)
T ss_dssp CTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEES
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEEC
Confidence 9999999999999999999999999999999999999999999999 79999999998654433322 5799999999
Q ss_pred cHHHHHHHHHHhc--cccceeeeeccCCCcEEeccCC-----CHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHH
Q 015249 158 STAVGKKLMAGAA--GTVKKVSLELGGNAPCIVFDDA-----DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 230 (410)
Q Consensus 158 s~~~~~~i~~~~~--~~~~~~~~e~gg~~~~iV~~~a-----dl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~ 230 (410)
|+.+|+.|++.++ +++||+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+
T Consensus 237 S~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~ 316 (534)
T 2y53_A 237 SADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVL 316 (534)
T ss_dssp CHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHH
T ss_pred CHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHH
Confidence 9999999998875 7899999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc-----C-CCCceecceEeccCCCC-
Q 015249 231 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH-----S-LGMTFYEPTVLSNVKSE- 303 (410)
Q Consensus 231 ~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~-----~-~~~~~~~Ptv~~~~~~~- 303 (410)
++|+++++++++|+|.++++++||++++.+++++.++|+++ .+|+++++||... + ..|+|++|||+.+++++
T Consensus 317 ~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~ 395 (534)
T 2y53_A 317 EALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDN 395 (534)
T ss_dssp HHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGG
T ss_pred HHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccc
Confidence 99999999999999999999999999999999999999999 6899999998642 1 24899999999999877
Q ss_pred -CcccccceecceeeeeecC---CH-----HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhc--ceeEEEECCCCC---
Q 015249 304 -MLVSREEVFGPVAPLLCFK---TE-----EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL--EYGLVGVNEGLI--- 369 (410)
Q Consensus 304 -~~~~~eE~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~--~~g~v~iN~~~~--- 369 (410)
+++++||+||||++|++|+ |. ||||+++|+++|||+++|||+|.++++++++++ ++|+|+||++..
T Consensus 396 ~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~ 475 (534)
T 2y53_A 396 ATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHS 475 (534)
T ss_dssp CSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTT
T ss_pred cCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCccccc
Confidence 6899999999999999999 99 999999999999999999999999999999999 899999998642
Q ss_pred ------CCCCCCccCCCCCCCCCC-ChHHHHHhhheeeEEEEe
Q 015249 370 ------STEVAPFGGVKQSGLGRE-GSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 370 ------~~~~~pfGg~~~SG~g~~-~g~~~l~~~~~~k~v~~~ 405 (410)
..+.+||||+|.||+|++ +|.+++++|++.|+|...
T Consensus 476 ~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 476 QTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA 518 (534)
T ss_dssp CCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEE
T ss_pred ccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecC
Confidence 257899999999999999 799999999999998753
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-80 Score=667.06 Aligned_cols=393 Identities=26% Similarity=0.402 Sum_probs=366.0
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc-CCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIP-ATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
.+++.+++.++++|+||++.++..|+..+++.++||+..+++..+.... ....+...++.++|+|||++|+|||||+..
T Consensus 586 ~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i 665 (1001)
T 3haz_A 586 ESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAI 665 (1001)
T ss_dssp HHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHH
T ss_pred HHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHH
Confidence 3456677999999999999999999999999999999999887764321 123467788999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+ +..|+.||+|+.|+||||+.+|+.|.
T Consensus 666 ~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~ 744 (1001)
T 3haz_A 666 FLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSIN 744 (1001)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998777 99999999999999999999999999
Q ss_pred HHhccc---cceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 167 AGAAGT---VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 167 ~~~~~~---~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
+.++++ .+|+++|+|||||+||++|||++.|++.+++|+|.|+||.|+++++||||++++|+|+++|+++++++++|
T Consensus 745 ~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vG 824 (1001)
T 3haz_A 745 RALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIG 824 (1001)
T ss_dssp HHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred HHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCC
Confidence 988854 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+|.++++++||++++.+++++.++|++++.+| ++ +||..+ .+|+|+.|||+.+ +++.+++||+||||++|++|++
T Consensus 825 dp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~ 899 (1001)
T 3haz_A 825 DPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFAGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRP 899 (1001)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECG
T ss_pred CcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-eccccC-CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCC
Confidence 99999999999999999999999999999888 88 888654 3589999999974 6788999999999999999997
Q ss_pred --HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCccCCCCCCCC-CCChHHHHHhhhe
Q 015249 324 --EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGMDEFLE 398 (410)
Q Consensus 324 --~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~--~~~~pfGg~~~SG~g-~~~g~~~l~~~~~ 398 (410)
+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.+.. .+.+||||+|.||+| +.+|++++++|++
T Consensus 900 ~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~ 979 (1001)
T 3haz_A 900 ENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFAT 979 (1001)
T ss_dssp GGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEE
T ss_pred CCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhce
Confidence 79999999999999999999999999999999999999999998753 467899999999999 5699999999999
Q ss_pred eeEEEEec
Q 015249 399 IKYVCLGD 406 (410)
Q Consensus 399 ~k~v~~~~ 406 (410)
.|+|+++.
T Consensus 980 ~K~v~~~~ 987 (1001)
T 3haz_A 980 EQTVTINT 987 (1001)
T ss_dssp EEEEEEEC
T ss_pred eeEEEECC
Confidence 99999874
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-77 Score=609.44 Aligned_cols=382 Identities=19% Similarity=0.226 Sum_probs=344.8
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHH--HhCccc----cCCCC-C-cceeEEeeeceEEEEEcC
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKR--VYGEII----PATLP-D-RRLFVLKQPVGVAGAITP 79 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~--~~~~~~----~~~~~-~-~~~~~~~~P~Gvv~~i~p 79 (410)
++++.++++++.+|+||++.+++.|+..+++.++|++...++ ..+... +...+ + ...++.++|+|||++|+|
T Consensus 66 ~~~~~ela~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 145 (510)
T 1ez0_A 66 EARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGA 145 (510)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECC
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECC
Confidence 456677799999999999999999999999999999998875 333221 11111 2 236789999999999999
Q ss_pred CCcchhhh--hhhccchhccCCeEEEecCCCcHHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHhHHhcCCCccEE
Q 015249 80 WNFPLAMI--TRKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKI 153 (410)
Q Consensus 80 ~n~p~~~~--~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l----~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v 153 (410)
||||+... .+++++||++||+||+|||+.+|.++..+++++ .++|+|+|++|+++|.+.+.+..|+.||+||.|
T Consensus 146 wN~P~~~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I 225 (510)
T 1ez0_A 146 SNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAV 225 (510)
T ss_dssp SSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEE
T ss_pred ccchhhhhhhHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEE
Confidence 99999985 499999999999999999999999999999987 668999999999999777889999999999999
Q ss_pred EEeCcHHHHHHHHHHhcccc--ceeeeeccCCCcEEeccCCCHH--HHHHHHHHHHHhccCCccccCCeEEEecc-hHHH
Q 015249 154 TFTGSTAVGKKLMAGAAGTV--KKVSLELGGNAPCIVFDDADLN--VAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEK 228 (410)
Q Consensus 154 ~ftGs~~~~~~i~~~~~~~~--~~~~~e~gg~~~~iV~~~adl~--~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~~ 228 (410)
+||||+.+|+.|++.+++++ +|+++|+|||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ ++|+
T Consensus 226 ~FTGS~~~G~~i~~~aa~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~ 305 (510)
T 1ez0_A 226 GFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQA 305 (510)
T ss_dssp EEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHH
T ss_pred EEeCcHHHHHHHHHHhhccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHH
Confidence 99999999999999999885 9999999999999999999999 99999999999999999999999999999 9999
Q ss_pred HHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHH-HCCCeEeeCCcccCCCCceecceEeccCCCC---C
Q 015249 229 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV-SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSE---M 304 (410)
Q Consensus 229 f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~-~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~---~ 304 (410)
|+++|+++++++++ ||++++.+.+++.+++++++ .+|+++++||. . |+|++|||+.+++++ +
T Consensus 306 f~~~l~~~~~~~~~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~-~---g~~~~Ptvl~~~~~~~~~~ 371 (510)
T 1ez0_A 306 FIETAQSLIRQQSP----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA-E---SPCVASALFVTSSENWRKH 371 (510)
T ss_dssp HHHHHHHHHHHCCC----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC-C---TTSBCCEEEEEEHHHHHHC
T ss_pred HHHHHHHHHHhcCC----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC-C---CCEecCEEEEecCCccccC
Confidence 99999999999863 68899999999999999998 47999999996 2 799999999877777 9
Q ss_pred cccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCH--HHHHHHHhhc--ceeEEEECCCCC---CCCCCCcc
Q 015249 305 LVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL--QRTWRVSEAL--EYGLVGVNEGLI---STEVAPFG 377 (410)
Q Consensus 305 ~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~--~~~~~~~~~~--~~g~v~iN~~~~---~~~~~pfG 377 (410)
++++||+||||++|++|+|.||||+++|+++|||+++|||+|. ++++++++++ ++|+|+||++.. ..+.+|||
T Consensus 372 ~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfG 451 (510)
T 1ez0_A 372 PAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHG 451 (510)
T ss_dssp GGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCC
T ss_pred HHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCC
Confidence 9999999999999999999999999999999999999999987 7899999999 799999998764 35789999
Q ss_pred C-CCCCCCCCC--ChHHHHHhhheeeEEE
Q 015249 378 G-VKQSGLGRE--GSKYGMDEFLEIKYVC 403 (410)
Q Consensus 378 g-~~~SG~g~~--~g~~~l~~~~~~k~v~ 403 (410)
| ++.||+|+. +|.+|+++|++.|++.
T Consensus 452 G~~~~sG~g~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 452 GPYPASTHSASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp CSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred CCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence 9 799999854 8999999999988654
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-77 Score=613.29 Aligned_cols=382 Identities=24% Similarity=0.306 Sum_probs=344.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHH--HhCccc----cC--CCCCcceeEEeeeceEEEEEcC
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKR--VYGEII----PA--TLPDRRLFVLKQPVGVAGAITP 79 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~--~~~~~~----~~--~~~~~~~~~~~~P~Gvv~~i~p 79 (410)
++++.++++++.+|+||++.+++.|+..+++.++|++...++ ..+... +. ..++...++.++|+|||++|+|
T Consensus 99 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 178 (528)
T 3v4c_A 99 EARAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGA 178 (528)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECC
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECC
Confidence 455677799999999999999999999999999999998876 222221 11 0123457889999999999999
Q ss_pred CCcchhhhh--hhccchhccCCeEEEecCCCcHHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHhHHhcCCCccEE
Q 015249 80 WNFPLAMIT--RKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKI 153 (410)
Q Consensus 80 ~n~p~~~~~--~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l----~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v 153 (410)
||||+...+ +++++||++||+||+|||+.+|.++..+++++ .++|+|+|++|+++|++.+.+..|+.||+|+.|
T Consensus 179 wN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V 258 (528)
T 3v4c_A 179 SNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAV 258 (528)
T ss_dssp SSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEE
T ss_pred CcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEE
Confidence 999999865 89999999999999999999999999888865 578999999999999878899999999999999
Q ss_pred EEeCcHHHHHHHHHHhcccc--ceeeeeccCCCcEEeccCC---CHHHHHHHHHHHHHhccCCccccCCeEEEecc-hHH
Q 015249 154 TFTGSTAVGKKLMAGAAGTV--KKVSLELGGNAPCIVFDDA---DLNVAVNGALAAKFRNSGQTCVCANRVLVQEG-IYE 227 (410)
Q Consensus 154 ~ftGs~~~~~~i~~~~~~~~--~~~~~e~gg~~~~iV~~~a---dl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~ 227 (410)
+||||+.+|+.|.+.+++++ +|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ ++|
T Consensus 259 ~fTGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d 338 (528)
T 3v4c_A 259 GFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADAD 338 (528)
T ss_dssp EEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHH
T ss_pred EEECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHH
Confidence 99999999999999999988 9999999999999999999 88999999999999999999999999999997 999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCC---C
Q 015249 228 KFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSE---M 304 (410)
Q Consensus 228 ~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~---~ 304 (410)
+|+++|++++++++. ++.+||++++.+.+++.++++ .+|+++++||.. .|+|++|||+.+++++ |
T Consensus 339 ~f~~~l~~~~~~~~~------~~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~~ 406 (528)
T 3v4c_A 339 RFTTAAVEALAKVAP------QTMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLAD 406 (528)
T ss_dssp HHHHHHHHHHHTCCC------EECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHHC
T ss_pred HHHHHHHHHHHhccc------CCCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCcccccC
Confidence 999999999999864 466899988888777777654 379999999975 4799999999888777 8
Q ss_pred cccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecC--CHHHHHHHHhhcc--eeEEEECCCCC---CCCCCCcc
Q 015249 305 LVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN--NLQRTWRVSEALE--YGLVGVNEGLI---STEVAPFG 377 (410)
Q Consensus 305 ~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~--d~~~~~~~~~~~~--~g~v~iN~~~~---~~~~~pfG 377 (410)
++++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++++++ +|+|+||+++. ..+.+|||
T Consensus 407 ~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfG 486 (528)
T 3v4c_A 407 HALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHG 486 (528)
T ss_dssp GGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCC
T ss_pred hhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCC
Confidence 99999999999999999999999999999999999999999 8999999999998 99999999765 35889999
Q ss_pred C-CCCCCCCCCC--hHHHHHhhheeeE
Q 015249 378 G-VKQSGLGREG--SKYGMDEFLEIKY 401 (410)
Q Consensus 378 g-~~~SG~g~~~--g~~~l~~~~~~k~ 401 (410)
| +|.||+|+++ |++|+++|++.|+
T Consensus 487 G~~~~Sg~gr~~~~G~~gl~~~~~~k~ 513 (528)
T 3v4c_A 487 GPYPASTNFGATSVGTMSIRRFLRPVA 513 (528)
T ss_dssp CTTTTBSCTTCCSSSGGGGGGGEEEEE
T ss_pred CCCCCCCCCCCCCCcHHHHHHhchhHH
Confidence 9 9999999985 9999999999985
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-72 Score=569.62 Aligned_cols=360 Identities=18% Similarity=0.160 Sum_probs=288.7
Q ss_pred HHHHHHHHHHHHHHhhchH----HHHH-HHHHH-HHHHHHHHHHHHHHHh------CccccCC--CCCcceeEEeeeceE
Q 015249 8 RKQKMLYLRLLMRLILGAS----SLLL-REVDY-GAKFIEFYAEEAKRVY------GEIIPAT--LPDRRLFVLKQPVGV 73 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~----~~a~-~ei~~-a~~~~~~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~P~Gv 73 (410)
.+++.++++++.+|+||++ .++. .|+.. ++..++|++...+.+. ++..+.. ..+...++.++|+||
T Consensus 50 ~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GV 129 (468)
T 1vlu_A 50 KANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGV 129 (468)
T ss_dssp HHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCE
T ss_pred HHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHHHHHHhhcCCCCCeecccccCCCCceeEEEecCcce
Confidence 4456677999999999998 8885 89999 8999999998887765 3322211 124456889999999
Q ss_pred EEEEcCCCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHH----H----cCCCCCcEEEEeCCchhHHhHHh
Q 015249 74 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL----Q----AGIPPGVVNVVMGNAPDIGDALL 145 (410)
Q Consensus 74 v~~i~p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~----~----aglP~g~v~~v~g~~~~~~~~l~ 145 (410)
|++|+||| | ...++++++||++||+||+|||+.+|.++..+++++. + +|+|+|++|+++ ++.+.+..|+
T Consensus 130 V~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~ 206 (468)
T 1vlu_A 130 LLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLD 206 (468)
T ss_dssp EEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGG
T ss_pred EEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHh
Confidence 99999999 9 8999999999999999999999999999999999995 8 999999999999 6667899999
Q ss_pred cCCCccEEEEeCcHHHHHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecch
Q 015249 146 TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 225 (410)
Q Consensus 146 ~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~ 225 (410)
.||+||.|+||||+.+|+.|++.+ .+|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++|||||+++
T Consensus 207 ~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i 282 (468)
T 1vlu_A 207 QDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF 282 (468)
T ss_dssp CTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS
T ss_pred hCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH
Confidence 999999999999999999999876 69999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHHHHhhccc---CCCCCCCccccccCCHHHHHHHHHH-HHHHHHCCCeEeeCCcccCCCCceecceEeccCC
Q 015249 226 YEKFADAFSKAVKNLKV---GDGFGEGVVQGPLINKAALEKVETF-VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVK 301 (410)
Q Consensus 226 ~~~f~~~L~~~~~~~~~---g~~~~~~~~~gp~~~~~~~~~~~~~-i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~ 301 (410)
|+|+++|+++++++++ |+|.+ .++ +++++ ++++||. | +.||++ ++
T Consensus 283 -d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~ 331 (468)
T 1vlu_A 283 -SKWWEVLENLTLEGGVTIHATKDL-----------------KTAYFDKLN----ELGKLTE-----A--IQCKTV--DA 331 (468)
T ss_dssp -TTHHHHHHHHHHHHCCCBEECHHH-----------------HHHHHHHHH----HHTCCCH-----H--HHTTBC----
T ss_pred -HHHHHHHHHHHHhcCCeecCCHHH-----------------hcccccccc----eeeccCC-----C--CCCcee--eC
Confidence 9999999999999987 77632 334 55554 4566664 3 689987 78
Q ss_pred CCCcccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCcc----
Q 015249 302 SEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFG---- 377 (410)
Q Consensus 302 ~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfG---- 377 (410)
+++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+|||
T Consensus 332 ~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~ 411 (468)
T 1vlu_A 332 DEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAE 411 (468)
T ss_dssp -----------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGGCC---------
T ss_pred CCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999987777889999
Q ss_pred -CCCCCCCCCCChHHHHHhhheeeEEEEec
Q 015249 378 -GVKQSGLGREGSKYGMDEFLEIKYVCLGD 406 (410)
Q Consensus 378 -g~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 406 (410)
|+|.||+|++ |++|+++|++.|+|+++.
T Consensus 412 ~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 412 VGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp --------------CCSGGGEEEEEEEECS
T ss_pred cceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 9999999999 999999999999998863
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-70 Score=555.36 Aligned_cols=374 Identities=18% Similarity=0.231 Sum_probs=326.2
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLR-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
.+++.++++++.+|+||+..+++. ++..+++.+.++.... +..+.. . ..++...+..++|+|||++|+|||||+..
T Consensus 48 ~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~~~~~-~~~g~~-~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~ 124 (464)
T 3k9d_A 48 YGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNYIKDM-KTIGML-K-EDNEKKVMEVAVPLGVVAGLIPSTNPTST 124 (464)
T ss_dssp HHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHTTC-CCSEEE-E-EETTTTEEEEEEECCEEEEEECSSSHHHH
T ss_pred HHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHhhhcc-ccccee-c-cCCCceeEEEEecceEEEEECCCcChHHH
Confidence 455677899999999999888764 4444444443332211 111111 1 12456788999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHH----HHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAA----ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 162 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~----~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~ 162 (410)
.++++++||++||+||+|||+.+|.++..+. +++.++|+|+|++|++++++.+.+..|+.||+||.|+||||+.+
T Consensus 125 ~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v- 203 (464)
T 3k9d_A 125 VIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM- 203 (464)
T ss_dssp HHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH-
T ss_pred HHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH-
Confidence 9999999999999999999999999998755 55789999999999999977889999999999999999999984
Q ss_pred HHHHHHhccccceeeeecc-CCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHH----
Q 015249 163 KKLMAGAAGTVKKVSLELG-GNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV---- 237 (410)
Q Consensus 163 ~~i~~~~~~~~~~~~~e~g-g~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~---- 237 (410)
.+.++++.||+ +|+| ||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++.
T Consensus 204 ---~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 279 (464)
T 3k9d_A 204 ---VKAAYSSGTPA-IGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFL 279 (464)
T ss_dssp ---HHHHTTSSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEEC
T ss_pred ---HHHHHhcCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhc
Confidence 45566788998 8888 99999999999999999999999999999999999999999999999999999985
Q ss_pred ---hhcccCCCC-CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceec
Q 015249 238 ---KNLKVGDGF-GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFG 313 (410)
Q Consensus 238 ---~~~~~g~~~-~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fg 313 (410)
+.+++|+|. ++++++||+++.++++++.++++.++.+|+++++||.. ++++++++. ||+||
T Consensus 280 ~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg~~--------------~v~~~~~~~-~E~fg 344 (464)
T 3k9d_A 280 SDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEET--------------KVGAKIPYS-REKLA 344 (464)
T ss_dssp CHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEEEEECC--------------CCSTTCGGG-SCCCS
T ss_pred ChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEEEcCCC--------------CCCCCCccc-ccccC
Confidence 467889887 77899999999999999999999888899999998853 356777765 89999
Q ss_pred ceeeeeecCCHHHHH----HHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC---------CCCCCCccCCC
Q 015249 314 PVAPLLCFKTEEEAI----HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI---------STEVAPFGGVK 380 (410)
Q Consensus 314 Pvl~v~~~~~~~eai----~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~---------~~~~~pfGg~~ 380 (410)
||++|++|+|+|||| +++|+++|||+++|||+|.+.++++++++++|+|+||+++. ..+.+|||| +
T Consensus 345 PVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G 423 (464)
T 3k9d_A 345 PILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-G 423 (464)
T ss_dssp SEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-T
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-c
Confidence 999999999999997 79999999999999999999999999999999999999874 468899998 7
Q ss_pred CCCCCCCChHHHHHhhheeeEEEEe
Q 015249 381 QSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 381 ~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
.+|.|.++|..++++|++.|+|...
T Consensus 424 ~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 424 AVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp GGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred CCCCCcCCCCCCHHHheEEEEEEec
Confidence 7899999999999999999999764
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-71 Score=555.40 Aligned_cols=350 Identities=17% Similarity=0.136 Sum_probs=297.6
Q ss_pred HHHHHHHHHHHHHHh-------hchHH----HHHHHHHHHHHHHHHHHHHHHHHhCccccCC--CCCcceeEEeeeceEE
Q 015249 8 RKQKMLYLRLLMRLI-------LGASS----LLLREVDYGAKFIEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVA 74 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~-------g~~~~----~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv 74 (410)
++++.++++++.+|+ ||++. +++.|+..+++.++|++...+++.++..+.. ..+...++.++|+|||
T Consensus 65 ~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv 144 (463)
T 2h5g_A 65 TDQRDEILLANKKDLEEAEGRLAAPLLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVL 144 (463)
T ss_dssp HHTHHHHHHHHHHHHHHHTTTSCHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEE
T ss_pred HHhHHHHHHHHHHHhhcccccCCCchhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceE
Confidence 345566789999999 59998 4678999999999999988777666543211 1345678999999999
Q ss_pred EEEcCCCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHhHHhcCCCc
Q 015249 75 GAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQV 150 (410)
Q Consensus 75 ~~i~p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~a----glP~g~v~~v~g~~~~~~~~l~~~~~v 150 (410)
++|+||| |.... +++++||++||+||+|||+.+|.++..|++++.++ | |+|++|+++| +.+.+..|+.||+|
T Consensus 145 ~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~v 220 (463)
T 2h5g_A 145 LVIFESR-PDCLP-QVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMI 220 (463)
T ss_dssp EEEESSC-TTHHH-HHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCC
T ss_pred EEEecCC-cHHHH-HHHHHHHHcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCc
Confidence 9999887 77666 89999999999999999999999999999999999 9 9999999998 67789999999999
Q ss_pred cEEEEeCcHHHHHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHH
Q 015249 151 RKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 230 (410)
Q Consensus 151 ~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~ 230 (410)
|.|+||||+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.| ||.|++++|||||++++|
T Consensus 221 d~I~FTGS~~~G~~i~~~aa--l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d--- 294 (463)
T 2h5g_A 221 DLIIPRGSSQLVRDIQKAAK--GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR--- 294 (463)
T ss_dssp SEEEEESCHHHHHHHHHHCS--SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT---
T ss_pred CEEEEECCHHHHHHHHHhcC--CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc---
Confidence 99999999999999999887 899999999999999999999999999999999999 999999999999999998
Q ss_pred HHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccc
Q 015249 231 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREE 310 (410)
Q Consensus 231 ~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE 310 (410)
||+ ++ +++++++++|++++.|+... ..++|+ +++|++++||
T Consensus 295 ----------------------~p~-----~~---~~i~~~~~~Ga~v~~G~~~~-~~g~~~--------~~~~~i~~eE 335 (463)
T 2h5g_A 295 ----------------------TPL-----FD---QIIDMLRVEQVKIHAGPKFA-SYLTFS--------PSEVKSLRTE 335 (463)
T ss_dssp ----------------------SHH-----HH---HHHHHHHHTTCEEEECHHHH-C-----------------CCSSCC
T ss_pred ----------------------hHH-----HH---HHHHHHHhCCCEEEeCCccc-ccCccC--------CCCchHHhcc
Confidence 233 23 34777788999998554322 123432 5789999999
Q ss_pred eecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCC--CC-
Q 015249 311 VFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG--RE- 387 (410)
Q Consensus 311 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g--~~- 387 (410)
+||||++|++|+|+||||+++|++++||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+| ++
T Consensus 336 ~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~ 415 (463)
T 2h5g_A 336 YGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIH 415 (463)
T ss_dssp CCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSS
T ss_pred ccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCccc
Confidence 999999999999999999999999999999999999999999999999999999998777789999999999999 65
Q ss_pred -ChHHHHHhhheeeEEEEec
Q 015249 388 -GSKYGMDEFLEIKYVCLGD 406 (410)
Q Consensus 388 -~g~~~l~~~~~~k~v~~~~ 406 (410)
+|++|+++|++.|+|+++.
T Consensus 416 ~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 416 ARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp CCEECCGGGGEEEEEEEECS
T ss_pred CCCHHHHHHhceeEEEEECC
Confidence 9999999999999998863
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-70 Score=543.75 Aligned_cols=350 Identities=20% Similarity=0.200 Sum_probs=305.9
Q ss_pred HHHHHHHHHHHHHHhhchH----HHHH--------HHHHHHHHHHHHHHHHHHHHhCccccCC--CCCcceeEEeeeceE
Q 015249 8 RKQKMLYLRLLMRLILGAS----SLLL--------REVDYGAKFIEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGV 73 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~----~~a~--------~ei~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gv 73 (410)
++++.++++++.+|+||+. .++. .|+..+++.++|++.++++ .++..+.. ..+...++.++|+||
T Consensus 50 ~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GV 128 (427)
T 1o20_A 50 DERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGP 128 (427)
T ss_dssp HHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCC
T ss_pred HHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHHHHHHHHhcccc-cCccccccccCCCceeEEEeeccee
Confidence 4456677999999999986 4553 6999999999999987754 34332211 124557889999999
Q ss_pred EEEEcCCCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHH----HcCCCCCcEEEEeCC-chhHHhHHhcCC
Q 015249 74 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL----QAGIPPGVVNVVMGN-APDIGDALLTSP 148 (410)
Q Consensus 74 v~~i~p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~----~aglP~g~v~~v~g~-~~~~~~~l~~~~ 148 (410)
|++|+||| +...++++++||++||+||+|||+.+|.++..+.+++. ++|+|+|++|+++|. ..+.+..|..||
T Consensus 129 V~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~ 206 (427)
T 1o20_A 129 IGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLRE 206 (427)
T ss_dssp EEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTT
T ss_pred EEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCC
Confidence 99999886 46888999999999999999999999999999999997 789999999999984 456788889899
Q ss_pred CccEEEEeCcHHHHHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHH
Q 015249 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 228 (410)
Q Consensus 149 ~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~ 228 (410)
+|+.|+||||+.+|+.|++.+ .+|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++|||||++++|+
T Consensus 207 ~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~ 282 (427)
T 1o20_A 207 YLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKE 282 (427)
T ss_dssp TCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHH
T ss_pred CccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHH
Confidence 999999999999999999887 59999999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccc
Q 015249 229 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSR 308 (410)
Q Consensus 229 f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~ 308 (410)
|+++|++++++++++ +.||... .+ |+ ||| +++++++++
T Consensus 283 f~~~l~~~~~~~~~~-----------------------------------~~gg~~~--~~-~~-Ptl---~~~~~~i~~ 320 (427)
T 1o20_A 283 FLPVIVEELRKHGVE-----------------------------------VRGCEKT--RE-IV-PDV---VPATEDDWP 320 (427)
T ss_dssp HHHHHHHHHHHTTCE-----------------------------------EEECHHH--HH-HS-TTS---EECCGGGTT
T ss_pred HHHHHHHHHHHcCCe-----------------------------------eecChhh--hh-hC-Ccc---cCCCcchhh
Confidence 999999999987642 1223221 12 33 885 345788999
Q ss_pred cceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCC---
Q 015249 309 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG--- 385 (410)
Q Consensus 309 eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g--- 385 (410)
||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+.....+.+||||.++||+|
T Consensus 321 eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g~~~ 400 (427)
T 1o20_A 321 TEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQR 400 (427)
T ss_dssp CCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSS
T ss_pred cccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCccCCCCCCCCcccccccCCc
Confidence 99999999999999999999999999999999999999999999999999999999997777788999999999997
Q ss_pred -CCChHHHHHhhheeeEEEEec
Q 015249 386 -REGSKYGMDEFLEIKYVCLGD 406 (410)
Q Consensus 386 -~~~g~~~l~~~~~~k~v~~~~ 406 (410)
+++|++|+++|++.|+|+++.
T Consensus 401 ~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 401 FHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp SSCCEECCTGGGEEEEEEEECS
T ss_pred ccCCChHHHHHHhceEEEEECC
Confidence 468999999999999998864
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-69 Score=543.70 Aligned_cols=351 Identities=21% Similarity=0.214 Sum_probs=293.6
Q ss_pred HHHHHHHHHHHHHhhchHH----HHH--------HHHHHHHHHHHHHHHHHHHHhCccccC--CCCCcceeEEeeeceEE
Q 015249 9 KQKMLYLRLLMRLILGASS----LLL--------REVDYGAKFIEFYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVA 74 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~----~a~--------~ei~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv 74 (410)
+++.++++++.+|+||+.. +++ .|+..+++.+++++.+.+. .++..+. ...+...++.++|+|||
T Consensus 63 ~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV 141 (444)
T 4ghk_A 63 RDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVEGLRQVATLPDP-IGEMSNLKYRPSGIQVGQMRVPLGVI 141 (444)
T ss_dssp HSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECSEE
T ss_pred hhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHHHHHHHHhhccc-cCccCCcccCCCCccceEEEeccEEE
Confidence 4456678899999998843 444 3789999999999987753 2333221 12356788999999999
Q ss_pred EEEcCCCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHH----HHcCCCCCcEEEEeCCch-hHHhHHhcCCC
Q 015249 75 GAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQAGIPPGVVNVVMGNAP-DIGDALLTSPQ 149 (410)
Q Consensus 75 ~~i~p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l----~~aglP~g~v~~v~g~~~-~~~~~l~~~~~ 149 (410)
++|+||| | ...++++++||++||+||+|||+.+|.++..+.+++ .++|+|+|++|+++|.+. +.+..|..||+
T Consensus 142 ~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~ 219 (444)
T 4ghk_A 142 GIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEY 219 (444)
T ss_dssp EEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTT
T ss_pred EEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCC
Confidence 9999998 8 588899999999999999999999999999999986 799999999999998554 47788888999
Q ss_pred ccEEEEeCcHHHHHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHH
Q 015249 150 VRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 229 (410)
Q Consensus 150 v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f 229 (410)
|+.|+||||+.+|+.+++.+ .+|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++|||||++++|+|
T Consensus 220 vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f 295 (444)
T 4ghk_A 220 VDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAV 295 (444)
T ss_dssp CSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHH
T ss_pred ccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHH
Confidence 99999999999999998876 69999999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHhhccc---CCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcc
Q 015249 230 ADAFSKAVKNLKV---GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLV 306 (410)
Q Consensus 230 ~~~L~~~~~~~~~---g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~ 306 (410)
+++|+++++++++ |+|. ..++++++. . | ++ +++++++
T Consensus 296 ~~~l~~~~~~~~~~~~g~p~-----------------~~~~i~~a~--------~-------G------~~--~~~~~~~ 335 (444)
T 4ghk_A 296 LSPLGRLYREKGVELRVDAD-----------------ARAVLEAAG--------V-------G------PL--VDATDED 335 (444)
T ss_dssp HHHHHHHHHHTTCEEEECHH-----------------HHHHHHHTT--------C-------C------CC--EECCSGG
T ss_pred HHHHHHHHHHcCCeecCCHH-----------------HHHHHHhcc--------c-------C------cc--cCCCchh
Confidence 9999999999887 6642 134455431 1 1 11 3467899
Q ss_pred cccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCC-
Q 015249 307 SREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG- 385 (410)
Q Consensus 307 ~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g- 385 (410)
++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||.++||+|
T Consensus 336 ~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~~sG~g~ 415 (444)
T 4ghk_A 336 WRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISN 415 (444)
T ss_dssp GTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGGGCSTTTTTCSCCSEEEC
T ss_pred hhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCccCCCCCcCCcccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999998877788999999999998
Q ss_pred ---CCChHHHHHhhheeeEEEEec
Q 015249 386 ---REGSKYGMDEFLEIKYVCLGD 406 (410)
Q Consensus 386 ---~~~g~~~l~~~~~~k~v~~~~ 406 (410)
+++|++|+++||+.|+|+++.
T Consensus 416 ~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 416 DKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp CSSSCCEEECGGGGEEEEEEEEEE
T ss_pred CcccCCChhHHHhhceEEEEEECC
Confidence 678999999999999998864
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-66 Score=525.32 Aligned_cols=373 Identities=18% Similarity=0.226 Sum_probs=304.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHH-HHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLR-EVDYGAKFI-EFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLA 85 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~ 85 (410)
.+++.++++++.+|+||++.+++. |+..+++.+ ++++.. +..+. .+ ..++...+..++|+|||++|+|||||++
T Consensus 43 ~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~~~~--~~~g~-~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~ 118 (452)
T 3my7_A 43 NQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKYKDE--QTCGI-LE-EDDNLGTMTIAEPVGIICGIVPTTNPTS 118 (452)
T ss_dssp HHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHTTC--CCSEE-C--------CEEEEEECCEEEEEECTTSTTH
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhhhc--ccccc-cc-CCCCCceEEEecCceEEEEEcCCCChHH
Confidence 455677899999999999999986 777777766 444321 11111 11 1234567889999999999999999999
Q ss_pred hhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHH
Q 015249 86 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL----QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 161 (410)
Q Consensus 86 ~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~----~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~ 161 (410)
..++++++||++||+||+|||+.+|.++..+.+++. ++|+|+|++|++++++.+.+..|+.||+|+.|+||||+.+
T Consensus 119 ~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~ 198 (452)
T 3my7_A 119 TAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGM 198 (452)
T ss_dssp HHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHH
T ss_pred HHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHH
Confidence 999999999999999999999999999988877764 7999999999999987889999999999999999999986
Q ss_pred HHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcc
Q 015249 162 GKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 241 (410)
Q Consensus 162 ~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~ 241 (410)
++ .++++.||+++|+|||+|+||++|||++.|++.+++++|+++||.|+++++||||+++||+|+++|+++
T Consensus 199 ~~----~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~----- 269 (452)
T 3my7_A 199 VK----AAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH----- 269 (452)
T ss_dssp HH----HHHTSSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT-----
T ss_pred HH----HHHhcCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh-----
Confidence 54 455678999999999999999999999999999999999999999999999999999999999999886
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCCceecceE-------eccCCCCCcccccce
Q 015249 242 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTV-------LSNVKSEMLVSREEV 311 (410)
Q Consensus 242 ~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~---~~~~~~~Ptv-------~~~~~~~~~~~~eE~ 311 (410)
+||++++++.+++.++++++...|+++ +|+.... ..|+|++||+ +.++++++++.+ |+
T Consensus 270 ----------~gpli~~~~~~~v~~~i~~~~~~~a~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~ 337 (452)
T 3my7_A 270 ----------KAHVLSKTDADKVRKVLLIDGALNAKI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EK 337 (452)
T ss_dssp ----------TEEECCHHHHHHHHHHHEETTEECGGG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CC
T ss_pred ----------CCCcCCHHHHHHHHHHHHhhcccCCeE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-Cc
Confidence 499999999999999998765667776 4665321 2478999997 778899999875 89
Q ss_pred ecceeeeeecCCHHHHHHHhhcCC----CCcEEEEecCCHHHHHH---HHhhcceeEEEECCCCCCC-----------CC
Q 015249 312 FGPVAPLLCFKTEEEAIHMANDTN----AGLAAYIFTNNLQRTWR---VSEALEYGLVGVNEGLIST-----------EV 373 (410)
Q Consensus 312 fgPvl~v~~~~~~~eai~~~n~~~----~gl~~sv~s~d~~~~~~---~~~~~~~g~v~iN~~~~~~-----------~~ 373 (410)
||||++|++|+|+||||+++|++. |||+++|||+|.+.+++ +++++++|+|+||+++.+. +.
T Consensus 338 FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~~~f~~~~~ 417 (452)
T 3my7_A 338 LSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPS 417 (452)
T ss_dssp SSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCCSEEEESCCCC---------------
T ss_pred cCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCEEEEEECCCCCCcccccccccCcCce
Confidence 999999999999999999999974 99999999999887777 9999999999999976521 11
Q ss_pred CCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 015249 374 APFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 406 (410)
Q Consensus 374 ~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 406 (410)
+++ |++..|.+..++..+.++|++.|+|..+.
T Consensus 418 ~t~-g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~ 449 (452)
T 3my7_A 418 LTL-GCGSWGGNSISENVGPKHLINKKTVAKRA 449 (452)
T ss_dssp --------------CCCCCGGGGEEEEEEECCC
T ss_pred Eee-eccccCCCccCCCCChhHeeeeeEEEeec
Confidence 111 34444555567778899999999988764
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.0083 Score=58.02 Aligned_cols=259 Identities=17% Similarity=0.173 Sum_probs=148.9
Q ss_pred CCcceeEEeeeceEEEEEcCCC---cchhhhhhhccchhccCCeE-EE-ecCCCcHHHHHHHHHHHHHcCCCCCcEEEEe
Q 015249 60 PDRRLFVLKQPVGVAGAITPWN---FPLAMITRKVGPALACGCTV-VV-KPSEFTPLTALAAAELALQAGIPPGVVNVVM 134 (410)
Q Consensus 60 ~~~~~~~~~~P~Gvv~~i~p~n---~p~~~~~~~~~~AL~~Gn~v-vl-kps~~~~~~~~~l~~~l~~aglP~g~v~~v~ 134 (410)
+|......+.|+--|++..|+- ||. +++...+||-.+|+.= |+ .|.+. -.....+.-+...+|.. .+..
T Consensus 119 ~G~~~g~~~~Pi~~VGlYVPGG~A~ypS-svLM~aiPAkVAGV~~Iv~~tPp~~-G~i~p~iL~AA~l~Gv~----eIy~ 192 (423)
T 4gic_A 119 DGTLLGQKITPLDRVGLYVPGGKAAYPS-SVLMNAVPAKVAGVPELIMAVPAPR-GELNALVLAAAYISGVD----RVFR 192 (423)
T ss_dssp TSCEEEEEEEECSEEEEECCCSTTCCHH-HHHHHHHHHHHHTCSEEEEECCCGG-GCCCHHHHHHHHHHTCC----EEEC
T ss_pred CCCEEEEEEEEecceeEEeeCCCCchhh-HHHHhhccHHHhCCCeEEEecCCCC-CCccHHHHHHHHhcCCc----EEEE
Confidence 5666778899999999999953 665 4445678999999973 33 34332 12223344445677775 3444
Q ss_pred CCchhHHhHHhc----CCCccEEEEeCcHHHHHHHHHHhccccceeeeecc-CCCcEEe--ccCCCHHHHHHHHHHHHHh
Q 015249 135 GNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAPCIV--FDDADLNVAVNGALAAKFR 207 (410)
Q Consensus 135 g~~~~~~~~l~~----~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~g-g~~~~iV--~~~adl~~a~~~i~~~~~~ 207 (410)
-.|.+.-.+|.- -|.||.|+=.|..-+..+=+... ..|-+.+- |-+=++| ++++|.+..+..++.-+=+
T Consensus 193 vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~----g~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAEH 268 (423)
T 4gic_A 193 IGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVF----GQVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAEH 268 (423)
T ss_dssp CCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHB----TTBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHTT
T ss_pred cCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhc----CCcCcccccccceEEEEeCCCCCHHHHHHHHHHhhcc
Confidence 335555545543 67899999889887665533322 22333332 4333333 3458999988887765544
Q ss_pred ccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC
Q 015249 208 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL 287 (410)
Q Consensus 208 ~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~ 287 (410)
... .+.++|..+ ++|.+++.+++.+.- --+... +.+.+.+++
T Consensus 269 d~~-----a~~iLvT~s--~~la~~V~~~i~~~l-----------~~l~r~---~i~~~sl~~----------------- 310 (423)
T 4gic_A 269 DED-----AQAILISPD--AAHLEAVQASIERLL-----------PGMERA---EVIRTSLER----------------- 310 (423)
T ss_dssp CTT-----CEEEEEESC--HHHHHHHHHHHHHHG-----------GGCTTH---HHHHHHHHH-----------------
T ss_pred CCC-----CeEEEEeCc--HHHHHHHHHHHHHHH-----------hhCccH---HHHHHHHhc-----------------
Confidence 322 445666554 445555544443320 000111 111111110
Q ss_pred CCceecceEeccCCCCCcccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcc-eeEEEECC
Q 015249 288 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVGVNE 366 (410)
Q Consensus 288 ~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~-~g~v~iN~ 366 (410)
--.++.++|.+|+++++|..-.= ..-|.++|+. .+..+++ +|.|++..
T Consensus 311 ---------------------------~g~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaIFlG~ 359 (423)
T 4gic_A 311 ---------------------------RGGMILVDDLEQAAAVANRIAPE-HLELSVESPE---VLVESIRNAGAIFMGR 359 (423)
T ss_dssp ---------------------------HCEEEECSSHHHHHHHHHHHCCS-EEEEESSCHH---HHGGGCCCCSEEEEC-
T ss_pred ---------------------------CceEEEEeehHHHHHHHHhhChH-HhhhhhCCHH---HHHhhCcEeceeecCC
Confidence 01234569999999999985332 5677888875 4677766 99999986
Q ss_pred CCC---------CCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 367 GLI---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 367 ~~~---------~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
++. .++-+|-+ |+.+..+.-+.+.|++.-++
T Consensus 360 ~tp~~~GDY~aG~NHvLPT~-----G~Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 360 YTAEALGDYCAGPNHVLPTS-----GTARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp ---------------CCCCT-----TGGGTCCCCCGGGGEEEEEE
T ss_pred CCchhhhhcCcCCCccCCCC-----CcccccCCCCHHHeeeeeeE
Confidence 553 13345544 44555666677888886654
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=97.62 E-value=0.012 Score=56.97 Aligned_cols=260 Identities=19% Similarity=0.181 Sum_probs=151.7
Q ss_pred CcceeEEeeeceEEEEEcCC---CcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 015249 61 DRRLFVLKQPVGVAGAITPW---NFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNA 137 (410)
Q Consensus 61 ~~~~~~~~~P~Gvv~~i~p~---n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~ 137 (410)
|...-..+.|+--|++..|+ -||. +.+...+||-.+|+.=|+--+|-. ....+.-+...+|..+ +..-.|
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~ypS-svLM~aiPAkVAGV~~Iv~~tPp~--i~p~iL~AA~l~Gv~e----Iy~vGG 186 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPP--IADEILYAAQLCGVQD----VFNVGG 186 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCTH-HHHHHHHHHHHHTCSEEEEEECSS--CCHHHHHHHHHTTCCE----EEECCH
T ss_pred CcEEEEEEeehheEEEEecCCCCCchh-HHHHhhccHhhcCCCeEEEECCCC--CCHHHHHHHHHcCCCE----Eeeccc
Confidence 55566789999999999996 4664 444557899999987665333211 2223344456777763 333225
Q ss_pred hhHHhHHhc----CCCccEEEEeCcHHHHHHHHHHhccccceeeeecc-CCCcEEe--ccCCCHHHHHHHHHHHHHhccC
Q 015249 138 PDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAPCIV--FDDADLNVAVNGALAAKFRNSG 210 (410)
Q Consensus 138 ~~~~~~l~~----~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~g-g~~~~iV--~~~adl~~a~~~i~~~~~~~~G 210 (410)
.+.-.+|.- -|.||.|+=.|..-+..+=+... .....|-+.+- |-+=++| ++++|.+..+..++.-+=+..
T Consensus 187 AQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs-~~~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEHd~- 264 (434)
T 1kae_A 187 AQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVS-QRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGP- 264 (434)
T ss_dssp HHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHH-HCTTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTTCT-
T ss_pred HHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhH-hhcCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhccCC-
Confidence 554444432 57899999888876544322220 01123434432 4443333 446899998888776554432
Q ss_pred CccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCc
Q 015249 211 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 290 (410)
Q Consensus 211 q~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~ 290 (410)
..+.++|..+ ++|.+++.+++.+.- .-+... + .+++++
T Consensus 265 ----~a~aiLvT~s--~~la~~V~~ev~~ql-----------~~lpr~---~----ia~~sl------------------ 302 (434)
T 1kae_A 265 ----DSQVILLTPA--ADMARRVAEAVERQL-----------AELPRA---E----TARQAL------------------ 302 (434)
T ss_dssp ----TCEEEEEESC--HHHHHHHHHHHHHHH-----------TTCTTH---H----HHHHHH------------------
T ss_pred ----CCcEEEEECC--HHHHHHHHHHHHHHH-----------HhCChH---H----HHHHHH------------------
Confidence 2445666544 444444444443210 000000 0 111111
Q ss_pred eecceEeccCCCCCcccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcc-eeEEEECCCCC
Q 015249 291 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVGVNEGLI 369 (410)
Q Consensus 291 ~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~-~g~v~iN~~~~ 369 (410)
..- .++.++|++|++++.|..-.= ..-|.++|+. .+..+++ +|.|++..++.
T Consensus 303 ----------------------~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~---~~l~~I~nAGaIFlG~~tp 355 (434)
T 1kae_A 303 ----------------------NAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVFLGDWSP 355 (434)
T ss_dssp ----------------------TTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCSCSEEEESTTCC
T ss_pred ----------------------HcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHH---HHHhhcCcccchhcCCCCc
Confidence 112 456679999999999985333 5678888875 5677766 99999997764
Q ss_pred ---------CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 370 ---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 370 ---------~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
.++-+|-+|. .+..+.-+.+.|++.-++.
T Consensus 356 e~~GDY~aG~NHvLPT~G~-----AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 356 ESAGDYASGTNHVLPTYGY-----TATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp HHHHHHTSSSCCCCCCTTG-----GGTCCCSCGGGGEEEEEEE
T ss_pred hhhcccccCCCcccCCCCc-----eeccCCCcHHhccceeeEE
Confidence 2455665554 4556666778888876553
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 410 | ||||
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-136 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-132 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-125 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 1e-106 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 1e-86 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 7e-85 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 9e-80 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 2e-69 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 7e-40 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 5e-25 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 1e-19 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 396 bits (1019), Expect = e-136
Identities = 162/371 (43%), Positives = 221/371 (59%), Gaps = 2/371 (0%)
Query: 35 YGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 94
K + + A A ++ G IP + + +PVGV G I PWNFPL M K+GPA
Sbjct: 118 GCIKTLRYCAGWADKIQGRTIPMD-GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPA 176
Query: 95 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKIT 154
L+CG TVVVKP+E TPLTAL L +AG PPGVVN+V G P G A+ + V K+
Sbjct: 177 LSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVA 236
Query: 155 FTGSTAVGKKLMAGAAG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTC 213
FTGST VGK + A +K+VSLELGG +PCIVF DADL+ AV A F + GQ C
Sbjct: 237 FTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCC 296
Query: 214 VCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 273
+ A+R+ V+E IY++F + K +G+ GV QGP I+K EK+ +E
Sbjct: 297 IAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKK 356
Query: 274 KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 333
+GAK+ GG F +PTV S+V +M +++EE+FGPV ++ FK+ ++ I AN+
Sbjct: 357 EGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANN 416
Query: 334 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGM 393
T GL+A IFTN++ + VS AL+ G V VN + + PFGG K SG GRE +YG
Sbjct: 417 TFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGF 476
Query: 394 DEFLEIKYVCL 404
E+ E+K V +
Sbjct: 477 HEYTEVKTVTI 487
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 388 bits (997), Expect = e-132
Identities = 153/373 (41%), Positives = 219/373 (58%), Gaps = 2/373 (0%)
Query: 33 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 92
+D K + +YA A + +G+ IP D + +PVGV G I PWNFPL M K+G
Sbjct: 116 LDMVLKCLRYYAGWADKYHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG 174
Query: 93 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRK 152
PALA G VV+K +E TPLTAL A L +AG PPGVVN+V G P G A+ + V K
Sbjct: 175 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDK 234
Query: 153 ITFTGSTAVGKKLMAGAAG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
+ FTGST +G+ + A +K+V+LELGG +P I+ DAD++ AV A A F N GQ
Sbjct: 235 VAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQ 294
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
+R VQE IY++F + K+ VG+ F QGP +++ +K+ ++
Sbjct: 295 CSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTG 354
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
+GAK+L GG + F +PTV +V+ M +++EE+FGPV +L FKT EE + A
Sbjct: 355 KQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRA 414
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
N++ GLAA +FT +L + +S+AL+ G V VN + +PFGG K SG GRE +Y
Sbjct: 415 NNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEY 474
Query: 392 GMDEFLEIKYVCL 404
G+ + E+K V +
Sbjct: 475 GLQAYTEVKTVTV 487
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 370 bits (950), Expect = e-125
Identities = 147/357 (41%), Positives = 198/357 (55%), Gaps = 9/357 (2%)
Query: 60 PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL 119
+ ++P+GV I WN+P + K PALACG VV KPS TP+T + AE+
Sbjct: 145 GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEI 204
Query: 120 ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLE 179
+AG+P G+VNVV G + G L P V K++FTGS GKK+M +A TVK V+LE
Sbjct: 205 FHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLE 263
Query: 180 LGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN 239
LGG +P ++F D +L AV GAL A F GQ C RV VQ I +F + K K
Sbjct: 264 LGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKA 323
Query: 240 LKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM------TFYE 293
+ VGD G LI+K L+KV FV A +GA+VL GG + F
Sbjct: 324 IVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMS 383
Query: 294 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 353
P VL N + +M +EE+FGPV +L F TEEE + AN+T GLA+ +FT ++ R RV
Sbjct: 384 PCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRV 443
Query: 354 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC--LGDMN 408
+ LE G +N IS PFGG K SG GRE + +D + ++K V +GD++
Sbjct: 444 AANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMGDVD 500
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 319 bits (817), Expect = e-106
Identities = 137/345 (39%), Positives = 200/345 (57%), Gaps = 2/345 (0%)
Query: 60 PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL 119
+ + P+GV +I PWN+PL M K+ PALA G VV+KPSE TPLTAL AEL
Sbjct: 128 EGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAEL 187
Query: 120 ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLE 179
A + P GVVN++ G +GD L P+VR ++ TGS A G+ +++ A ++K+ +E
Sbjct: 188 A-KDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHME 246
Query: 180 LGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN 239
LGG AP IVFDDAD+ V G + N+GQ C A R+ Q+GIY+ + AV
Sbjct: 247 LGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVAT 306
Query: 240 LKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGA-KVLLGGRRHSLGMTFYEPTVLS 298
LK G E GPL + A LE+V VE+A + G KV+ GG + +Y PT+L+
Sbjct: 307 LKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLA 366
Query: 299 NVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE 358
+ + ++EVFGPV + F EE+ ++ AND+ GLA+ ++T ++ R RVS L+
Sbjct: 367 GALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQ 426
Query: 359 YGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403
YG VN + P GG K SG G++ S YG++++ +++V
Sbjct: 427 YGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 471
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 270 bits (692), Expect = 1e-86
Identities = 119/381 (31%), Positives = 182/381 (47%), Gaps = 12/381 (3%)
Query: 33 VDYGAKFIEFYAEEAKRVYG-EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
V FIE+YA A R + P P+G I PWNFP+A+ T +
Sbjct: 135 VAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMI 194
Query: 92 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
+A G TV+ KP+E + E+ +AG PPGVVN + G ++G L+ P++R
Sbjct: 195 VGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIR 254
Query: 152 KITFTGSTAVGKKLMAGA------AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAK 205
I FTGS VG K+ A K+ +E GG IV + AD ++A G + +
Sbjct: 255 FINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSA 314
Query: 206 FRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVE 265
+ GQ C A+R+++ +G YE + K + L VG E GP+++ KV
Sbjct: 315 YGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVL 373
Query: 266 TFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325
+++E ++G VL GG+R F PTV + V + +++EE+FGPV ++ K
Sbjct: 374 SYIEIGKNEGQLVL-GGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFA 432
Query: 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV--APFGGVKQSG 383
EA+ +ANDT GL +++ + G + N + V PFGG K SG
Sbjct: 433 EALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSG 492
Query: 384 LGRE-GSKYGMDEFLEIKYVC 403
+ G+ + FLE+K V
Sbjct: 493 TNAKTGALDYLRLFLEMKAVA 513
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 264 bits (676), Expect = 7e-85
Identities = 117/345 (33%), Positives = 181/345 (52%), Gaps = 7/345 (2%)
Query: 60 PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL 119
+ V ++PVG+ AI+P+N+P+ + K+ PAL G + KP ++ L AE
Sbjct: 132 KKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEA 191
Query: 120 ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLE 179
+AG+P GV N + G +IGD ++ V I FTGST +G+++ A ++ + LE
Sbjct: 192 FAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLE 249
Query: 180 LGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN 239
LGG IV +DADL + +A F SGQ C RVLV E + ++ + + V
Sbjct: 250 LGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLA 309
Query: 240 LKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSN 299
L +G+ + PLI+ + + VE + DA KGA L +R P +
Sbjct: 310 LTIGNPE-DDADITPLIDTKSADYVEGLINDANDKGATALTEIKREG---NLICPILFDK 365
Query: 300 VKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEY 359
V ++M ++ EE FGPV P++ + EEAI ++N + GL A IFTN+ R + ++E LE
Sbjct: 366 VTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEV 425
Query: 360 GLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403
G V +N T+ PF G K+SG G +G KY ++ +K V
Sbjct: 426 GTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 470
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 250 bits (639), Expect = 9e-80
Identities = 106/378 (28%), Positives = 173/378 (45%), Gaps = 15/378 (3%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEII---PATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88
EV + + ++ +E + L++ +P+GV I WN+P +
Sbjct: 61 EVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTI 120
Query: 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSP 148
+ + A+A G V++KPSE + A A ++ L
Sbjct: 121 QPMVGAVAAGNAVILKPSEVSGHMADLLAT---LIPQYMDQNLYLVVKGGVPETTELLKE 177
Query: 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
+ I +TGSTAVGK +MA AA + V+LELGG +PC V D DL+VA KF N
Sbjct: 178 RFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMN 237
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 268
SGQTCV + +L I + + K++K+ G+ + G +IN ++V+ +
Sbjct: 238 SGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLI 296
Query: 269 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 328
++ + + G + PT+L +V + V +EE+FGPV P++C ++ EEAI
Sbjct: 297 DN------QKVAHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAI 350
Query: 329 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV--APFGGVKQSGLGR 386
N LA Y+F+NN + ++ G V N+ ++ V PFGGV SG+G
Sbjct: 351 QFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGA 410
Query: 387 EGSKYGMDEFLEIKYVCL 404
K + F + +
Sbjct: 411 YHGKKSFETFSHRRSCLV 428
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 225 bits (574), Expect = 2e-69
Identities = 85/277 (30%), Positives = 142/277 (51%), Gaps = 4/277 (1%)
Query: 130 VNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVF 189
++ + ++ +V ++FTGST VG++++ VK+ +ELGG P IV
Sbjct: 214 AIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVL 271
Query: 190 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 249
+DADL++A + + +GQ C VL + +Y K + +K + +L+VGD
Sbjct: 272 EDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPT 331
Query: 250 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEP-TVLSNVKSEMLVSR 308
V GPLI+ +A++++ +EDAV KG +VL GGRR ++ +M++ +
Sbjct: 332 VDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDMVLYK 391
Query: 309 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 368
EVF PVA + K ++AI +AN GL A +F ++ + R LE G + +N+
Sbjct: 392 REVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMP 451
Query: 369 I-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404
PFGG K+SG+ REG Y ++ K +
Sbjct: 452 RHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVF 488
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 144 bits (364), Expect = 7e-40
Identities = 60/404 (14%), Positives = 113/404 (27%), Gaps = 55/404 (13%)
Query: 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLK 68
+++ + L+ RL L + +D K E V I D
Sbjct: 55 RERGVKESLVDRLALND-----KRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARV 109
Query: 69 QPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPG 128
+ + + AL G T++++ + A +A
Sbjct: 110 RVPIG-PIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETE 168
Query: 129 VVNVVMGNAPDI-GDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI 187
+ + + +L ++R+ G L++ LE G I
Sbjct: 169 IPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHI 228
Query: 188 VF-DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246
+ ADL AV + AK + G ++ ++ I ++F + ++ V
Sbjct: 229 FVDESADLKKAVPVIINAKTQRPGTCNAAEKLLVHEK-IAKEFLPVIVEELRKHGVEVRG 287
Query: 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLV 306
E + A E
Sbjct: 288 CEKTREIVPDVVPATEDDW----------------------------------------- 306
Query: 307 SREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE 366
E + + K +EAI + G + I T N + ++ V VN
Sbjct: 307 -PTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNA 365
Query: 367 GLISTEVAPFGGVKQSGLGREGS----KYGMDEFLEIKYVCLGD 406
T+ FG + G+ + G+ E K+V LG+
Sbjct: 366 STRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 409
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 104 bits (260), Expect = 5e-25
Identities = 73/427 (17%), Positives = 138/427 (32%), Gaps = 40/427 (9%)
Query: 1 MYRVWEERKQKMLYLRLLMRLILGASSLLLR-EVDYGAKFIEFYAEEAKRVYGEIIP--- 56
+ + E + + + L + L E+ A + +A+
Sbjct: 54 LRTIASELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDT 113
Query: 57 -----ATLPDRRLFVLKQPVGVAGAITPWNFPLA--MITRKVGPALACGCTVVVKPSEFT 109
A LP + + +G NFPLA ALA GC V+VK
Sbjct: 114 PNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAH 173
Query: 110 PLT----ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 165
P T A + Q +P + ++ GN +G AL++ P+++ + FTGS G+ L
Sbjct: 174 PGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRAL 233
Query: 166 MAGAAGTVKKVSL--ELGGNAPCIVFDDADLNVAVN--GALAAKFRNSGQTCVCANRVLV 221
A + + ELG P +F A A +A+ GQ C V
Sbjct: 234 FNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFA 293
Query: 222 QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 281
+ ++++ + ++ ++ + ++ S
Sbjct: 294 LNTPETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFS-------- 345
Query: 282 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAY 341
+ S + S + EE+FGP + ++ + + + ++ L A
Sbjct: 346 -QAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTAT 404
Query: 342 IFTN--NLQRTWRVSEALEY--GLVGVNEGLISTEV-------APFGGVKQSGLGREGSK 390
I + + ++ LE G + N EV P+ S
Sbjct: 405 IHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSA-STSVGA 463
Query: 391 YGMDEFL 397
+ +L
Sbjct: 464 EAIHRWL 470
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 88.0 bits (217), Expect = 1e-19
Identities = 70/413 (16%), Positives = 123/413 (29%), Gaps = 55/413 (13%)
Query: 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLK 68
K+ L LL RL L + + + I+ AE + G++ A D L + +
Sbjct: 57 KETGLADSLLKRLDLFKG----DKFEVMLQGIKDVAE-LEDPVGKVKMARELDDGLTLYQ 111
Query: 69 QPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL-------AL 121
V + + +I ++ G ++K + + T A++
Sbjct: 112 VTAPVGVLLVIFESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQ 171
Query: 122 QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG 181
P ++ D+ D L + + GS A+ +K+ V
Sbjct: 172 SETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTKIPVLG---HAD 228
Query: 182 GNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 241
G + +DADL A +L AK + I KF+ +
Sbjct: 229 GICSIYLDEDADLIKAKRISLDAKTNYPAGCNAMETLL-----INPKFSKWWEVLENLTL 283
Query: 242 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVK 301
G V +K K + + LG +
Sbjct: 284 EGG-----------------------VTIHATKDLKTAYFDKLNELGKLTEAIQCKTVDA 320
Query: 302 SEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGL 361
E +E + E AI N ++ I T N + + ++
Sbjct: 321 DEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSG 380
Query: 362 VGVNEGLISTEVA---PFG-----GVKQSGLGREGSKYGMDEFLEIKYVCLGD 406
V N ST A +G G+ S + G G+D + +Y GD
Sbjct: 381 VYWNA---STRFADGFRYGFGAEVGISTSKIHARG-PVGLDGLVSYQYQIRGD 429
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 410 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 97.21 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=1.1e-87 Score=685.10 Aligned_cols=399 Identities=41% Similarity=0.639 Sum_probs=378.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
+++++++++++++|+||++.++. .|+..+++.++|++.+.++..++..+. ..+...++.++|+|||++|+|||||+..
T Consensus 90 ~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 168 (494)
T d1bxsa_ 90 ERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM-DGNFFTYTRSEPVGVCGQIIPWNFPLLM 168 (494)
T ss_dssp HHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeecC-CCCceeEEEEccEEEEEEEeCccchhHH
Confidence 34556779999999999999865 689999999999999998877665543 3467788999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+|+|++.+.+..|+.||+|+.|.||||+.+|+.|+
T Consensus 169 ~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~i~ 248 (494)
T d1bxsa_ 169 FLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK 248 (494)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHhcc-ccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 167 AGAAG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 167 ~~~~~-~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
+.+++ ++||+++|+||+||+||++|||++.+++.+++++|.++||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 249 ~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g~~ 328 (494)
T d1bxsa_ 249 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNP 328 (494)
T ss_dssp HHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCT
T ss_pred HHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhheeeecc
Confidence 98875 68999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
.++++++||++++.+++++.+++++++++|+++++||......|+|++|||+.++++++++++||+||||++|++|+|.|
T Consensus 329 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~~~ 408 (494)
T d1bxsa_ 329 LTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLD 408 (494)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred CCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECCHH
Confidence 99999999999999999999999999999999999998765568999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
|||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 409 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~i~~~ 488 (494)
T d1bxsa_ 409 DVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK 488 (494)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCCcCCCCCcCccccccCChhhHHHHHHHhcceEEEEEe
Confidence 99999999999999999999999999999999999999999888788999999999999999999999999999999997
Q ss_pred cc
Q 015249 406 DM 407 (410)
Q Consensus 406 ~~ 407 (410)
-.
T Consensus 489 ~~ 490 (494)
T d1bxsa_ 489 IS 490 (494)
T ss_dssp CS
T ss_pred cC
Confidence 53
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=6.7e-87 Score=678.82 Aligned_cols=397 Identities=39% Similarity=0.598 Sum_probs=377.2
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
++++.++++++++|+||++.++. .|+..+++.++|++.+..+..++..+. ..+...++.++|+|||++|+|||||+..
T Consensus 90 ~~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~P~N~P~~~ 168 (494)
T d1o04a_ 90 ERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI-DGDFFSYTRHEPVGVCGQIIPWNFPLLM 168 (494)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceecc-CCCceeEEEEecccEEEEECCcccHHHH
Confidence 44556679999999999999986 599999999999999998877665553 2466788999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.||+|+.|.||||+.+|+.|+
T Consensus 169 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~ 248 (494)
T d1o04a_ 169 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQ 248 (494)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999998
Q ss_pred HHhc-cccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 167 AGAA-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 167 ~~~~-~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
+.++ ++++|+++|+||+||+||++|||++.|++.+++++|.++||.|++++++|||++++|+|++.|.++++.+++|+|
T Consensus 249 ~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p 328 (494)
T d1o04a_ 249 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNP 328 (494)
T ss_dssp HHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCT
T ss_pred HHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhheeecCc
Confidence 8775 678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
.++++++||++++.+++++.+++++++++|+++++||....+.|+|++|||+.++++++++++||+||||++|++|+|.+
T Consensus 329 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~~~ 408 (494)
T d1o04a_ 329 FDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE 408 (494)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred ccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCCHH
Confidence 99999999999999999999999999999999999998765568999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
|||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.++|++||+.|+|+++
T Consensus 409 eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~v~~~ 488 (494)
T d1o04a_ 409 EVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 488 (494)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEE
T ss_pred HHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcccccCCchhHHHHHHHhcCeEEEEEe
Confidence 99999999999999999999999999999999999999999888778899999999999999999999999999999986
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=6.9e-86 Score=672.03 Aligned_cols=396 Identities=39% Similarity=0.604 Sum_probs=377.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
+++++++++++++|+|||+.+++.|+..+++.++|++.+..+..+..... ..+...++.++|+|||++|+|||||+...
T Consensus 94 ~~~~eela~~~~~etGkp~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~NfP~~~~ 172 (503)
T d1a4sa_ 94 RERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQL-PGGAFAYTRREPLGVCAGILAWNYPFMIA 172 (503)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEEC-GGGCEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHhHHHHHHHHHHhhhhcchhhhhhhhhhhhccccccccccccccccccc-CCCcccccccccceeeecccCCCChHHHH
Confidence 44567779999999999999999999999999999999988766554332 24667899999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++| +.+.+..|+.||+|+.|.||||+++|+.|.+
T Consensus 173 ~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~ 251 (503)
T d1a4sa_ 173 AWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVME 251 (503)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 5789999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++.||+++|+||+||+||++|||++.|++.+++++|.++||.|++++|+|||++++++|++++.+.++++++|+|.+
T Consensus 252 ~aa~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~ 331 (503)
T d1a4sa_ 252 MSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLL 331 (503)
T ss_dssp HHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HhhhcCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEeeccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC------CCCceecceEeccCCCCCcccccceecceeeeeec
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS------LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 321 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~------~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~ 321 (410)
+.+++||++++.+++++++++++++.+|+++++||.... ..|+|++|||+.++++++++++||+||||++|++|
T Consensus 332 ~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~ 411 (503)
T d1a4sa_ 332 TETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPF 411 (503)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred cccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEc
Confidence 999999999999999999999999999999999997532 35899999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 015249 322 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 401 (410)
Q Consensus 322 ~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~ 401 (410)
+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||+++...+.+||||+|.||+|+++|.++|++||+.|+
T Consensus 412 ~~~~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~ 491 (503)
T d1a4sa_ 412 DTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKT 491 (503)
T ss_dssp CCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEE
T ss_pred CCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCccCcccCcCCcchHHHHHHHhhCeEE
Confidence 99999999999999999999999999999999999999999999988877889999999999999999999999999999
Q ss_pred EEEe
Q 015249 402 VCLG 405 (410)
Q Consensus 402 v~~~ 405 (410)
|+++
T Consensus 492 v~~~ 495 (503)
T d1a4sa_ 492 VIVE 495 (503)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9986
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1e-84 Score=660.10 Aligned_cols=396 Identities=36% Similarity=0.611 Sum_probs=366.9
Q ss_pred HHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLR-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
+++.+++++++.|+||++.++.. ++..+...++|++...........+...++...+++++|+|||++|+|||||+...
T Consensus 76 ~~~~ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~ 155 (474)
T d1wnda_ 76 ENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMA 155 (474)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred hCHHHHHHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEecccceEEEeecchHhhhh
Confidence 45667799999999999999976 56666677777777665443333333335778889999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..++++++++ +|+|++|+++|++.+.++.|+.||+|++|.||||+++|+.|.+
T Consensus 156 ~~~~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~~-lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~ 234 (474)
T d1wnda_ 156 AWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIIS 234 (474)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHH
T ss_pred hccHHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHHh-CCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHH
Confidence 999999999999999999999999999999988765 9999999999988889999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.+++++||+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|++.|+++++++++|+|.+
T Consensus 235 ~a~~~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~ 314 (474)
T d1wnda_ 235 HTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDD 314 (474)
T ss_dssp HHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTS
T ss_pred hhhcCCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeE-eeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKV-LLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~-~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 326 (410)
+++++||++++.+.+++..++++++..|+.. +.|+......|+|++|||+.++++++++++||+||||++|++|+|.||
T Consensus 315 ~~~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~de 394 (474)
T d1wnda_ 315 ESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQ 394 (474)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred CCceecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHH
Confidence 9999999999999999999999999999854 555554445689999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 327 ai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++
T Consensus 395 ai~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~gl~~~t~~k~v~i~ 473 (474)
T d1wnda_ 395 VVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 473 (474)
T ss_dssp HHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCCccCCCCcccccccccCccCHHHHHHHcCCEEEEEEe
Confidence 9999999999999999999999999999999999999999888788999999999999999999999999999999986
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=4.2e-83 Score=654.09 Aligned_cols=395 Identities=30% Similarity=0.461 Sum_probs=366.2
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc-CCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIP-ATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
+++.++++++++|+||++.+++.|+.++++.+++++..+......... ...++...+..++|+|||++|+|||||+...
T Consensus 111 ~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~ 190 (516)
T d1uzba_ 111 RRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIF 190 (516)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHHHHhCCCccccchhHHHHHHHHHHHHHHHHhhhhcccccccccccceeEEeeccCccccccccccccccc
Confidence 455667999999999999999999999999999999998876654332 2234667788999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.||+|+.|.||||+.+|+.|.+
T Consensus 191 ~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~ 270 (516)
T d1uzba_ 191 TGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYE 270 (516)
T ss_dssp HHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred cccccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred Hhc------cccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcc
Q 015249 168 GAA------GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 241 (410)
Q Consensus 168 ~~~------~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~ 241 (410)
.++ .++||+++|+||+||+||++|||++.+++.+++++|.++||.|++++++|||++++|+|++++.+++++++
T Consensus 271 ~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~ 350 (516)
T d1uzba_ 271 AAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLS 350 (516)
T ss_dssp HHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCC
T ss_pred HHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhcc
Confidence 887 56899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeec
Q 015249 242 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 321 (410)
Q Consensus 242 ~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~ 321 (410)
+| |.++++++||++++.+++++.+++++++..|+.++ +|...+..|+|++|||+.++++++++++||+||||++|++|
T Consensus 351 ~g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~-~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~ 428 (516)
T d1uzba_ 351 VG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVL-GGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRV 428 (516)
T ss_dssp BS-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEEE-CCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEE
T ss_pred cC-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEEE-CCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEEe
Confidence 99 66889999999999999999999999998887664 55544346899999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCCCCCCCCCCC-hHHHHHhhhe
Q 015249 322 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREG-SKYGMDEFLE 398 (410)
Q Consensus 322 ~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pfGg~~~SG~g~~~-g~~~l~~~~~ 398 (410)
+|.|||++++|+++|||++||||+|.+.++++++++++|+|+||+++. ..+.+||||+|.||+|+++ |.+++++||+
T Consensus 429 ~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G~~~~l~~~~~ 508 (516)
T d1uzba_ 429 KDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLE 508 (516)
T ss_dssp SSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEE
T ss_pred CCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcccchHHHHHHhCC
Confidence 999999999999999999999999999999999999999999998765 3568999999999999985 5899999999
Q ss_pred eeEEEEe
Q 015249 399 IKYVCLG 405 (410)
Q Consensus 399 ~k~v~~~ 405 (410)
.|+|+.+
T Consensus 509 ~k~v~~r 515 (516)
T d1uzba_ 509 MKAVAER 515 (516)
T ss_dssp EEEEEEE
T ss_pred eeeEEEc
Confidence 9999853
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=1.3e-77 Score=611.52 Aligned_cols=393 Identities=32% Similarity=0.510 Sum_probs=360.1
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc----CCCCCcceeEEeeeceEEEEEcCCCcch
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIP----ATLPDRRLFVLKQPVGVAGAITPWNFPL 84 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~P~Gvv~~i~p~n~p~ 84 (410)
+++..+++++++|+|||+.+++.|+.++++.++|++...++..+.... ....+...++.|+|+|||++|+|||||+
T Consensus 90 ~~~~~la~~~~~etGk~~~~a~~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~ 169 (499)
T d1ky8a_ 90 RNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPL 169 (499)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHH
T ss_pred HhHHHHHHHHHHHhCCCHHHHhhhhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccccccc
Confidence 445677999999999999999999999999999999888766543321 1223566789999999999999999999
Q ss_pred hhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHH
Q 015249 85 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 164 (410)
Q Consensus 85 ~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~ 164 (410)
..+++++++||++||+||+|||+.+|.++..+.+++.++|+|.++++++.+++ +.+..|+.|++++.+.||||+..++.
T Consensus 170 ~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~-~~~~~l~~~~~i~~v~ftGs~~~g~~ 248 (499)
T d1ky8a_ 170 FDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGER 248 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCG-GGGHHHHHCTTCCEEEEESCHHHHHH
T ss_pred hhhhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCCh-HHHHHHhhccceeEEEeecccccceE
Confidence 99999999999999999999999999999999999999999999999999864 56788999999999999999999999
Q ss_pred HHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCC
Q 015249 165 LMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244 (410)
Q Consensus 165 i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~ 244 (410)
+.+.++ .+++++|+||+||+||++|||++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+
T Consensus 249 i~~~~~--~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G~ 326 (499)
T d1ky8a_ 249 VVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGD 326 (499)
T ss_dssp HHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSC
T ss_pred Eeeccc--ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCccCC
Confidence 998774 579999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEe---ccCCCCCcccccceecceeeeeec
Q 015249 245 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVL---SNVKSEMLVSREEVFGPVAPLLCF 321 (410)
Q Consensus 245 ~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~---~~~~~~~~~~~eE~fgPvl~v~~~ 321 (410)
|.|+++++||++++.+++++++++++++.+|++++.+|.... ..+..++++ ..+.+|+++++||+||||++|++|
T Consensus 327 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~~ 404 (499)
T d1ky8a_ 327 PRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLG--PTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEV 404 (499)
T ss_dssp TTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEE--TTEECCEEEECCHHHHTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeecccc--ccccccccccccccCCCCChhhhccccCceEEEEEc
Confidence 999999999999999999999999999999999999998752 233333333 345679999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheee
Q 015249 322 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400 (410)
Q Consensus 322 ~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k 400 (410)
+|.+||++++|+++|||++||||+|.+.++++++++++|+|+||+.+.. .+.+||||.|.||+|+++|.+|+++||+.|
T Consensus 405 ~~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k 484 (499)
T d1ky8a_ 405 KDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYK 484 (499)
T ss_dssp SSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEE
T ss_pred CCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCccccccCcCCCCCHHHHHHHhhCEE
Confidence 9999999999999999999999999999999999999999999998764 478999999999999999999999999999
Q ss_pred EEEEec
Q 015249 401 YVCLGD 406 (410)
Q Consensus 401 ~v~~~~ 406 (410)
+|+++-
T Consensus 485 ~i~~~~ 490 (499)
T d1ky8a_ 485 TIVFNY 490 (499)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 999873
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.6e-76 Score=593.49 Aligned_cols=389 Identities=30% Similarity=0.460 Sum_probs=350.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccc---cCCCCCcceeEEeeeceEEEEEcCCCcc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEII---PATLPDRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
+++++++++++.+|+||+..+++ .|+..+++.+++++.....+..... .....+...++.++|+|||++|+|||||
T Consensus 36 ~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P 115 (446)
T d1ad3a_ 36 NENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYP 115 (446)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHSCEECCCCSTTTTSEEEEEEEECSEEEEECCSSST
T ss_pred HHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCcceEEEeecceeEecccccccc
Confidence 45666779999999999999986 6999999999998877655433221 1223455678899999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
+..+++++++||++||+||+|||+.+|.++..+.+++.+. +|.++++++.+.+.. ...+. +++++.|.||||+.+|+
T Consensus 116 ~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~-~~~~~~v~fTGs~~~G~ 192 (446)
T d1ad3a_ 116 FNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQNLYLVVKGGVPE-TTELL-KERFDHIMYTGSTAVGK 192 (446)
T ss_dssp THHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHH-SCTTTEEECCCSHHH-HHHHT-TSCCSEEEEESCHHHHH
T ss_pred cccccccccccchhcccccccccceecccccccccccccc-ccccccccccccchh-hhhhc-ccccCceEEECcHHHHH
Confidence 9999999999999999999999999999999999988775 899999999886544 44444 66899999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
.|.+.++++.+|+++|+||+||+||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|.+.++.+ +|
T Consensus 193 ~i~~~aa~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g 271 (446)
T d1ad3a_ 193 IVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YG 271 (446)
T ss_dssp HHHHHHHTTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHHTTTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HC
T ss_pred HHHHHHHhcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHhcCCCCccccCCccccccchhHHHHHhhhhhhhee-ec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887 89
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+|.++.+++||++++.+.+++..++++ ++...|+... .+++|+.|||+.+++++|++++||+||||++|++|+|
T Consensus 272 ~~~~~~~~~gp~i~~~~~~~~~~~~~~-----a~~~~g~~~~-~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~ 345 (446)
T d1ad3a_ 272 EDAKQSRDYGRIINDRHFQRVKGLIDN-----QKVAHGGTWD-QSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRS 345 (446)
T ss_dssp SCGGGCTTSCCCSCHHHHHHHHHTTTT-----SCEEECCCEE-TTTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSS
T ss_pred ccccccccccchhhhhhhhhhhccccc-----hhcccceeec-CCCCCcCCEEEECCCCCCHHHhCcccCcceEEEEecc
Confidence 999999999999999999999887764 4555555443 4678999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 401 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~ 401 (410)
.||||+++|+++|||+++|||+|.+.++++++++++|+|+||+++. ..+.+||||+|.||+|+++|.+|+++||+.|+
T Consensus 346 ~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~ 425 (446)
T d1ad3a_ 346 LEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRS 425 (446)
T ss_dssp HHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESSSSGGGGCTTSCCCCCGGGEECCCSTHHHHHHTEEEEE
T ss_pred HHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeCCccCCCCCCCCccccccceeccchHHHHHHHHhceeE
Confidence 9999999999999999999999999999999999999999998764 46789999999999999999999999999999
Q ss_pred EEEec
Q 015249 402 VCLGD 406 (410)
Q Consensus 402 v~~~~ 406 (410)
|+++.
T Consensus 426 v~~~~ 430 (446)
T d1ad3a_ 426 CLVKS 430 (446)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 99864
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=2.4e-74 Score=584.77 Aligned_cols=391 Identities=33% Similarity=0.551 Sum_probs=361.9
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-----ccCCCCCcceeEEeeeceEEEEEcCCCcc
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEI-----IPATLPDRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
++++++++++++|+||++.+++.|+..++..+++++.......... ......+...+++++|+|||++|+|||||
T Consensus 76 ~~~~~la~~~~~e~Gk~~~~a~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P 155 (474)
T d1euha_ 76 RDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYP 155 (474)
T ss_dssp HTHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTST
T ss_pred HhHHHHHHHHHHHhCCCcchhccccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEecccccc
Confidence 4456779999999999999999999999999999988775533211 11222456678899999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
++..++.+++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++.|+.||+|+.|.||||+.+++
T Consensus 156 ~~~~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~ 235 (474)
T d1euha_ 156 VNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGE 235 (474)
T ss_dssp THHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred chhhhhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCcccccc
Confidence 99999999999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
.+.+.++ .+|+++|+||+||+||++|||++.+++.+++++|.++||.|+++++||||++++++|++.++++...++.|
T Consensus 236 ~i~~~a~--~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~ 313 (474)
T d1euha_ 236 RIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIG 313 (474)
T ss_dssp HHHHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBS
T ss_pred chhhhcc--cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhcccc
Confidence 9998875 67999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
++.+.. +++|+......+++.+.+......+...+..+.. .++|++|||+..+++++++++||+||||++|++|+|
T Consensus 314 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~ 389 (474)
T d1euha_ 314 NPEDDA-DITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTS 389 (474)
T ss_dssp CGGGTC-SBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESC
T ss_pred Cccccc-ccccccchHHHHHHHHHHHhhhcccccccccCCC---CCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCC
Confidence 988754 5799999999999999999999999888876654 479999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
+||||+++|++++||+++|||+|.+.++++++++++|+|+||+++. ..+.+||||+|+||+|+++|++||++||+.|+|
T Consensus 390 ~deai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 469 (474)
T d1euha_ 390 VEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSV 469 (474)
T ss_dssp HHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCCCCCCCCccccccCccCccCHHHHHHHhCcEEEE
Confidence 9999999999999999999999999999999999999999999875 457899999999999999999999999999999
Q ss_pred EEe
Q 015249 403 CLG 405 (410)
Q Consensus 403 ~~~ 405 (410)
+++
T Consensus 470 ~~~ 472 (474)
T d1euha_ 470 VFD 472 (474)
T ss_dssp EEE
T ss_pred EEe
Confidence 986
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=5.8e-67 Score=532.33 Aligned_cols=384 Identities=19% Similarity=0.251 Sum_probs=318.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccc------c--CCCCCcceeEEeeeceEEEEEcC
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEII------P--ATLPDRRLFVLKQPVGVAGAITP 79 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~P~Gvv~~i~p 79 (410)
.+++.++++++++|+|||+.+++.|+..+++.++||++..++...... + ...++...+..++|+|||++|+|
T Consensus 62 ~~~~~~la~~~~~e~Gkp~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~P 141 (504)
T d1ez0a_ 62 EARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGA 141 (504)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECC
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEec
Confidence 345567799999999999999999999999999999998876443221 1 11234566788999999999999
Q ss_pred CCcchhhhh--hhccchhccCCeEEEecCCCcHHHHHHHH----HHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEE
Q 015249 80 WNFPLAMIT--RKVGPALACGCTVVVKPSEFTPLTALAAA----ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKI 153 (410)
Q Consensus 80 ~n~p~~~~~--~~~~~AL~~Gn~vvlkps~~~~~~~~~l~----~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v 153 (410)
||||+.... +++++||++||+||+|||+.+|.++..+. +++.++|+|+|++|+++|++.+.++.|+.||+|+.|
T Consensus 142 wNfPl~~~~~~~~~a~ALaaGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V 221 (504)
T d1ez0a_ 142 SNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAV 221 (504)
T ss_dssp SSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEE
T ss_pred ccccchhhhhhHHHHHHHHHhccceecCcccccchhhhhhhHHHHHhhhhccccCceeccccccccccccccccccccee
Confidence 999986554 58999999999999999999999887654 556788999999999999888899999999999999
Q ss_pred EEeCcHHHHHHHHHHhcccccee--eeeccCCCcEEeccCCCHHHHH--HHHHHHHHhccCCccccCCeEEEecchH-HH
Q 015249 154 TFTGSTAVGKKLMAGAAGTVKKV--SLELGGNAPCIVFDDADLNVAV--NGALAAKFRNSGQTCVCANRVLVQEGIY-EK 228 (410)
Q Consensus 154 ~ftGs~~~~~~i~~~~~~~~~~~--~~e~gg~~~~iV~~~adl~~a~--~~i~~~~~~~~Gq~C~a~~~v~V~~~~~-~~ 228 (410)
.||||+.+|+.|.+.++++.+++ ++|+||+||+||++|+|++.|+ +.+++++|.|+||.|++++++||+++.+ +.
T Consensus 222 ~FTGS~~~g~~i~~~aa~~~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~ 301 (504)
T d1ez0a_ 222 GFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQA 301 (504)
T ss_dssp EEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHH
T ss_pred eeccchHHHHHHHhhhhcccccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHH
Confidence 99999999999999999888775 4599999999999999999874 4789999999999999999999887755 45
Q ss_pred HHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEec---cCCCCCc
Q 015249 229 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLS---NVKSEML 305 (410)
Q Consensus 229 f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~---~~~~~~~ 305 (410)
|++.+++.++.. ++++.+||+++..+++++ ++.+...++++..++... .+..|+++. ++..+++
T Consensus 302 ~~~~~~~~~~~~------~~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 368 (504)
T d1ez0a_ 302 FIETAQSLIRQQ------SPSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAES----PCVASALFVTSSENWRKHP 368 (504)
T ss_dssp HHHHHHHHHHHC------CCBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCCT----TSBCCEEEEEEHHHHHHCG
T ss_pred Hhhhhhhhhhhc------ccccccccchhhhhhhhh---hhhhhhhhhhcccccccc----cccCCccccccccccccch
Confidence 777776665542 457889999998888776 455666788888877543 344444443 3345788
Q ss_pred ccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecC--CHHHHHHHHhhcc--eeEEEECCCCC-------CCCCC
Q 015249 306 VSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN--NLQRTWRVSEALE--YGLVGVNEGLI-------STEVA 374 (410)
Q Consensus 306 ~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~--d~~~~~~~~~~~~--~g~v~iN~~~~-------~~~~~ 374 (410)
+++||+||||++|++|+|.|||++++|+++|||+++|||+ |..++.+++++++ +|+|+||++++ ...+.
T Consensus 369 ~~~eE~FGPvl~i~~~~~~~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~gg 448 (504)
T d1ez0a_ 369 AWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGG 448 (504)
T ss_dssp GGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCC
T ss_pred hhcccccCCeeeeeecCCHHHHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCC
Confidence 9999999999999999999999999999999999999996 5568899999987 89999998754 12345
Q ss_pred CccCCCCCCCCCCChHHHHHhhheeeEEEEecc
Q 015249 375 PFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 407 (410)
Q Consensus 375 pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~~~ 407 (410)
||||.+.||.| ..|.+++++|++.. .++++
T Consensus 449 pf~g~~~sg~~-~~G~~~i~~f~r~v--~~q~~ 478 (504)
T d1ez0a_ 449 PYPASTHSAST-SVGAEAIHRWLRPV--AYQAL 478 (504)
T ss_dssp STTSCSCSSCC-SSSGGGGGGGEEEE--EEESC
T ss_pred CCCCcCCCCCC-cchHHHHHHHhchh--hhccC
Confidence 89999999955 46899999998754 44443
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=3.7e-57 Score=450.31 Aligned_cols=352 Identities=19% Similarity=0.137 Sum_probs=275.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHH------------HHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEE
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLRE------------VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAG 75 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~e------------i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 75 (410)
++++.++++++.+|+||+..+++.| ++.+++.+++++...+...+...... ........++|+|+++
T Consensus 37 ~~~~~eia~~~~~e~gk~~~~~~~e~~~~rl~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gv~~ 115 (414)
T d1o20a_ 37 DERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWV-REDGLRIARVRVPIGP 115 (414)
T ss_dssp HHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHHHHHHHHSCCCTTCEEEEEE-CTTSCEEEEEEEECCC
T ss_pred HHhHHHHHHHHHHHHhhHHhccccHHHHHHHhccHHHHHHHHHHHHHHHHhhhhccccccccc-cccccceeeccccccc
Confidence 4555667999999999998876544 66788888888887655444333221 2344567888999999
Q ss_pred EEcCCCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHhHHhcCCCcc
Q 015249 76 AITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVR 151 (410)
Q Consensus 76 ~i~p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~a----glP~g~v~~v~g~~~~~~~~l~~~~~v~ 151 (410)
++.|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ |+|.++++.+.+...+....+..++.+
T Consensus 116 ~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 194 (414)
T d1o20a_ 116 IGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREY- 194 (414)
T ss_dssp EEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTT-
T ss_pred ccccccCcHHHhhhccchheecccchhcccccccccccchhhhHHHhhhhhccccccccccccccchhhhhhccccccc-
Confidence 999999999999999999999999999999999999999999987766 555555777776555666666654443
Q ss_pred EEEEeCcHHHHHHHHHHhccccceeeeeccCCC-cEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHH
Q 015249 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNA-PCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 230 (410)
Q Consensus 152 ~v~ftGs~~~~~~i~~~~~~~~~~~~~e~gg~~-~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~ 230 (410)
.|+||+..+..+.+.++++.+++++|+||+| ++||++|||++.|++.++.++|.+ ||.|++++|++||++++|+|+
T Consensus 195 --~~~~~~~~~~~v~~~a~~~~~~~~le~gGgn~~viv~~dAd~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~ 271 (414)
T d1o20a_ 195 --LSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFL 271 (414)
T ss_dssp --CSEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHH
T ss_pred --CeEEEcccHHHHHHHhhhccccceecccCCCCCeecccccchhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHH
Confidence 3333333444455556666688888888655 678889999999999999999876 999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccc
Q 015249 231 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREE 310 (410)
Q Consensus 231 ~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE 310 (410)
++|.+...+..++.+.++.. ..+.+.+... ....++||
T Consensus 272 ~~l~~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~---~~~~~~~E 309 (414)
T d1o20a_ 272 PVIVEELRKHGVEVRGCEKT---------------------------------------REIVPDVVPA---TEDDWPTE 309 (414)
T ss_dssp HHHHHHHHHTTCEEEECHHH---------------------------------------HHHSTTSEEC---CGGGTTCC
T ss_pred HHHhHHHHHcCCccccchhh---------------------------------------hhhcccceec---ccccCCce
Confidence 99999988765544322111 0011111111 12345799
Q ss_pred eecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCC---
Q 015249 311 VFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE--- 387 (410)
Q Consensus 311 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~--- 387 (410)
+||||++|++|+|.||||+++|+++|||+++|||+|.++++++++++++|.|+||+++.+.+..|||+.++||+|..
T Consensus 310 ~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~~~i~~G~V~IN~~~~~~~~~~~g~g~~~G~~~~~~~ 389 (414)
T d1o20a_ 310 YLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFH 389 (414)
T ss_dssp CCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSS
T ss_pred eeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHHHHHhCCeeEEEEeCCCcCCCCCCCCCCCceeccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999877666667777777776432
Q ss_pred -ChHHHHHhhheeeEEEEec
Q 015249 388 -GSKYGMDEFLEIKYVCLGD 406 (410)
Q Consensus 388 -~g~~~l~~~~~~k~v~~~~ 406 (410)
+|++|+++||+.|+|++++
T Consensus 390 ~~G~~gl~~~t~~K~vv~~~ 409 (414)
T d1o20a_ 390 ARGPVGLRELTTYKFVVLGE 409 (414)
T ss_dssp CCEECCTGGGEEEEEEEECS
T ss_pred CCchhHHHHhCeEEEEEECC
Confidence 4899999999999998875
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.2e-46 Score=374.32 Aligned_cols=339 Identities=18% Similarity=0.152 Sum_probs=236.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCcccc--CCCCCcceeEEeeeceEEEEEcCCCcchhhhhhhccchhccCCeEEEecCCCcH
Q 015249 33 VDYGAKFIEFYAEEAKRVYGEIIP--ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 110 (410)
Q Consensus 33 i~~a~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~ 110 (410)
+..+++.++..+.++++. +.... ....+...+..+.|+||+++| |+++| ..++...+.||++||+||+||++.++
T Consensus 77 i~~~~~~l~~i~~~~dpv-g~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~ 153 (436)
T d1vlua_ 77 FEVMLQGIKDVAELEDPV-GKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESV 153 (436)
T ss_dssp HHHHHHHHHHHHHSCCSS-SCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGH
T ss_pred HHHHHHHHHHHHhccccc-eeEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccc
Confidence 455556666666555432 11111 112456677888999999998 56667 56677888999999999999999999
Q ss_pred HHHHHHHHHH--------HHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHHhccccceeeeeccC
Q 015249 111 LTALAAAELA--------LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGG 182 (410)
Q Consensus 111 ~~~~~l~~~l--------~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~gg 182 (410)
.++..+.+++ .++|+|+++++++++ +.+.+..|..|++||.|+||||....+.+.+.. .+|++.++||
T Consensus 154 ~s~~~l~~~~~~al~~a~~~aGlP~~~i~~v~~-~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~---~~pvi~~~~G 229 (436)
T d1vlua_ 154 NTFREMAKIVNDTIAQFQSETGVPVGSVQLIET-RQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADG 229 (436)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCTTSEEECCC-C--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSC
T ss_pred cCHHHHHHHHHHhhhhhccccCCCCceEEEecc-hhHHHHHhccCCCCceEEEecCCceeeeeeccc---cceEEEecCC
Confidence 9988876655 577999999999987 467889999999999999999999988887765 2589999999
Q ss_pred CCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHH
Q 015249 183 NAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALE 262 (410)
Q Consensus 183 ~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~ 262 (410)
++|+||++|||++.|++.++.++|.+.|| |++.++++||+++++.|...+....+.-. .+. .++....
T Consensus 230 ~~~~~Vd~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~gv---------~l~--~~~~~~~ 297 (436)
T d1vlua_ 230 ICSIYLDEDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLEGGV---------TIH--ATKDLKT 297 (436)
T ss_dssp CEEEEECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHHCC---------CBE--ECHHHHH
T ss_pred ccceeecccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHHhCCc---------EEE--eCHHHHH
Confidence 99999999999999999999999999986 89999999999999888665554444310 000 1222222
Q ss_pred HHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEE
Q 015249 263 KVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 342 (410)
Q Consensus 263 ~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv 342 (410)
.....+.. . +.. ......|++....+.+ +.+|.|+||++|++|+|+||||+++|++++||+++|
T Consensus 298 ~~~~~~~~----~------~~~---~~~~~~~~~~~~~~~d---~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I 361 (436)
T d1vlua_ 298 AYFDKLNE----L------GKL---TEAIQCKTVDADEEQD---FDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAI 361 (436)
T ss_dssp HHHHHHHH----H------TCC---CHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEE
T ss_pred Hhhhhhhh----c------ccc---cccccccccCCCcccc---hhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEE
Confidence 22221111 1 111 1123334443333333 579999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCC----CCChHHHHHhhheeeEEEEec
Q 015249 343 FTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG----REGSKYGMDEFLEIKYVCLGD 406 (410)
Q Consensus 343 ~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g----~~~g~~~l~~~~~~k~v~~~~ 406 (410)
||+|.+.+++|++++++|.|+||+++.+.++.+||.-.+-|+. ..+|+.||+.+|..|+++..+
T Consensus 362 ~T~d~~~a~~F~~~vda~~V~vNasTrf~Dg~~~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~g~ 429 (436)
T d1vlua_ 362 VTENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRGD 429 (436)
T ss_dssp ECSCHHHHHHHHHHCCCSEEEESSCGGGCC----------------------CCSGGGEEEEEEEECS
T ss_pred EECCHHHHHHHHHhCCceEEEEcCCCccCCCCcccCcceeeEecCCCCCCCCcChHHhceEEEEEECC
Confidence 9999999999999999999999999998888888854455553 349999999999999988763
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=97.21 E-value=0.038 Score=51.59 Aligned_cols=257 Identities=18% Similarity=0.218 Sum_probs=153.1
Q ss_pred CCcceeEEeeeceEEEEEcCCC---cchhhhhhhccchhccCCeEE--EecCCCcHHHHHHHHHHHHHcCCCCCcEEEEe
Q 015249 60 PDRRLFVLKQPVGVAGAITPWN---FPLAMITRKVGPALACGCTVV--VKPSEFTPLTALAAAELALQAGIPPGVVNVVM 134 (410)
Q Consensus 60 ~~~~~~~~~~P~Gvv~~i~p~n---~p~~~~~~~~~~AL~~Gn~vv--lkps~~~~~~~~~l~~~l~~aglP~g~v~~v~ 134 (410)
+|......+.|+--|++..|+- ||. +++...+||..+|..=| ..|+...|. +.-+...+|.. .+..
T Consensus 110 ~Gv~~g~~~~PI~~VGlYVPGG~A~ypS-svLM~aiPAkvAGV~~Ivv~tPp~~~~~----~l~aa~~~Gv~----~iy~ 180 (431)
T d1k75a_ 110 PGVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPPIADE----ILYAAQLCGVQ----DVFN 180 (431)
T ss_dssp TTEEEEEEEEECSEEEEECCCSSSCCHH-HHHHHHHHHHHHTCSEEEEEECSSCCHH----HHHHHHHTTCC----EEEE
T ss_pred CCceeeeeeeehhhheeeccCCCccchH-HHHHHHHHHHhcCCCceeEEeCCCCcch----HHHHHHHcCcc----ceEe
Confidence 4566677899999999999964 665 44455789999998655 456544543 33445667765 3444
Q ss_pred CCchhHHhHHhc----CCCccEEEEeCcHHHHHHHHHHhccccceeeeec-cCCCc--EEeccCCCHHHHHHHHHHHHHh
Q 015249 135 GNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLEL-GGNAP--CIVFDDADLNVAVNGALAAKFR 207 (410)
Q Consensus 135 g~~~~~~~~l~~----~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~-gg~~~--~iV~~~adl~~a~~~i~~~~~~ 207 (410)
-.|.+.-.+|.- -|.||.|+=.|+.-+..+=+...+.. ..+-+.+ -|-+= +|.++++|.+.++..++.-+=+
T Consensus 181 ~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~-~~vgID~~aGPSEv~viAD~~a~p~~iAaDllaQAEH 259 (431)
T d1k75a_ 181 VGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRL-DGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEH 259 (431)
T ss_dssp CCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHST-TSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTT
T ss_pred cCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcccC-CccccccccCCceEEEEecCCCCHHHHHHHHHhccCC
Confidence 335655555543 67899999899887655433322211 1122222 13333 3445568999988887765544
Q ss_pred ccCCccccCCeEEEecc--hHHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc
Q 015249 208 NSGQTCVCANRVLVQEG--IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 285 (410)
Q Consensus 208 ~~Gq~C~a~~~v~V~~~--~~~~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~ 285 (410)
... .+.++|..+ ..+++.+.+.++++.+. ... ..+...
T Consensus 260 ~~~-----a~~ilvt~~~~l~~~v~~~i~~~l~~l~---------------r~~-------i~~~s~------------- 299 (431)
T d1k75a_ 260 GPD-----SQVILLTPAADMARRVAEAVERQLAELP---------------RAE-------TARQAL------------- 299 (431)
T ss_dssp CTT-----CEEEEEESCHHHHHHHHHHHHHHHHTCS---------------SCH-------HHHHHH-------------
T ss_pred ccc-----ceeEEEeccHHHHHHHHHHHHHHhhhch---------------HHH-------HHHhhh-------------
Confidence 433 344666544 44555555544444321 000 000000
Q ss_pred CCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhc-ceeEEEE
Q 015249 286 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL-EYGLVGV 364 (410)
Q Consensus 286 ~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~-~~g~v~i 364 (410)
+-.| ++.++|++|+++++|..--= ...|.++|+. .+..++ ++|.|++
T Consensus 300 ------------------------~~~~----ii~v~~~~ea~~~~N~~APE-HL~l~~~~~~---~~~~~i~nAGsIfl 347 (431)
T d1k75a_ 300 ------------------------NASR----LIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVFL 347 (431)
T ss_dssp ------------------------TTCE----EEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCCCSEEEE
T ss_pred ------------------------ccce----EEEecCHHHHHHHHHhhhHH-HHHHHhcCHH---HHHhhhhhcchhhc
Confidence 0011 34579999999999985333 4778888875 466666 5999999
Q ss_pred CCCCC---------CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 365 NEGLI---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 365 N~~~~---------~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
..++. .++.+|-||. .+..+.-+...|++..++.
T Consensus 348 G~~sp~a~GDY~aGpnHvLPT~G~-----Ar~~sgLsv~dF~k~~s~~ 390 (431)
T d1k75a_ 348 GDWSPESAGDYASGTNHVLPTYGY-----TATCSSLGLADFQKRMTVQ 390 (431)
T ss_dssp STTCCHHHHHHTSSSCCCCCCTTG-----GGTCCCCCGGGGEEEEEEE
T ss_pred CCCCcchhhccccCCCccCCCCCc-----eeecCCCCHHHeeeeeeEE
Confidence 98764 2456676654 4555555678888876553
|